BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= gi|254780380|ref|YP_003064793.1| flagellar basal body rod
protein FlgC [Candidatus Liberibacter asiaticus str. psy62]
         (134 letters)

Database: nr 
           14,124,377 sequences; 4,842,793,630 total letters

Searching..................................................done



>gi|313673746|ref|YP_004051857.1| flagellar basal-body rod protein flgc [Calditerrivibrio
           nitroreducens DSM 19672]
 gi|312940502|gb|ADR19694.1| flagellar basal-body rod protein FlgC [Calditerrivibrio
           nitroreducens DSM 19672]
          Length = 134

 Score =  135 bits (338), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 52/134 (38%), Positives = 80/134 (59%), Gaps = 3/134 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH--GSG 59
                  ++A +GL+ Q  R+ +IS N+ANA TT    G  PY+RK + F+E++    +G
Sbjct: 1   MGFFNILNVAATGLSAQRIRINVISSNLANANTTKTETGE-PYKRKDVVFKELLEGEYTG 59

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GVRV+K+  D+  FV +++PGHP AN  G V+YPNVN + E  +M E +R Y AN+  + 
Sbjct: 60  GVRVEKVVEDKKPFVLKYEPGHPDANEEGYVQYPNVNPIEEMVNMIEASRSYEANVTVLN 119

Query: 120 QSHDMMTTTLDLLR 133
            +  +    LD+ R
Sbjct: 120 TAKQLAMRALDIGR 133


>gi|291278935|ref|YP_003495770.1| flagellar basal-body rod protein FlgC [Deferribacter desulfuricans
           SSM1]
 gi|290753637|dbj|BAI80014.1| flagellar basal-body rod protein FlgC [Deferribacter desulfuricans
           SSM1]
          Length = 134

 Score =  129 bits (324), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 47/134 (35%), Positives = 76/134 (56%), Gaps = 3/134 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--G 59
                   IA++GL+ Q  R+ +IS N+ANA TT    G  PY+++ + F  ++ G   G
Sbjct: 1   MSYFDILKIASTGLSAQRIRINVISSNLANANTTRTEDG-TPYQKREVIFRTILDGELRG 59

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GVRV+K+  D+   + +++PGHP AN  G V YPN+N + E  +M E +R Y AN+  + 
Sbjct: 60  GVRVEKVVRDEKPPILKYEPGHPDANEEGYVAYPNINPIEEMVNMLEASRSYEANVTVLN 119

Query: 120 QSHDMMTTTLDLLR 133
            +  +    L++ R
Sbjct: 120 TAKQLALKALEIGR 133


>gi|206890290|ref|YP_002248113.1| flagellar basal-body rod protein FlgC [Thermodesulfovibrio
           yellowstonii DSM 11347]
 gi|206742228|gb|ACI21285.1| flagellar basal-body rod protein FlgC [Thermodesulfovibrio
           yellowstonii DSM 11347]
          Length = 135

 Score =  128 bits (322), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 46/134 (34%), Positives = 69/134 (51%), Gaps = 1/134 (0%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG-SG 59
           M  +     ++ +GL  Q  R+ +I+ N+AN  +T    G    R+  +    +    S 
Sbjct: 1   MKDIFLPLKVSATGLEAQKIRLNVIASNLANINSTKTPEGGPYRRKDVLFTTYMYDQISQ 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GV V++I  DQ  F   ++P HP A+ +G VKYPNVN + E  ++   +R Y ANL  I 
Sbjct: 61  GVDVQRIVEDQRPFRIVYEPSHPDADKNGYVKYPNVNPMEEMINLISASRAYEANLTMIN 120

Query: 120 QSHDMMTTTLDLLR 133
              DM   TLDLL+
Sbjct: 121 SYKDMFMRTLDLLK 134


>gi|253990129|ref|YP_003041485.1| flagellar basal body rod protein FlgC [Photorhabdus asymbiotica
           subsp. asymbiotica ATCC 43949]
 gi|211639034|emb|CAR67648.1| flagellar basal-body rod protein flgc (putative proximal rod
           protein) [Photorhabdus asymbiotica subsp. asymbiotica
           ATCC 43949]
 gi|253781579|emb|CAQ84742.1| flagellar basal-body rod protein flgc (putative proximal rod
           protein) [Photorhabdus asymbiotica]
          Length = 134

 Score =  126 bits (317), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 42/134 (31%), Positives = 70/134 (52%), Gaps = 2/134 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM--HGSG 59
             L++   IA S L+ QS R+ + + N+ANA +     G     ++ +          +G
Sbjct: 1   MSLLSVFDIAGSALSAQSQRLNVSASNMANADSVAGPDGQPYRAKQVVFRVAAPAGQETG 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GVRV +I  D + F  E+ PGHP+A+  G V+ PNV+V+ E  +    +R Y AN++ + 
Sbjct: 61  GVRVSEIVDDPTPFRLEYQPGHPLADEKGYVRMPNVDVVGEMINTISASRSYQANVEVLN 120

Query: 120 QSHDMMTTTLDLLR 133
            +  +M  TL L +
Sbjct: 121 TTKSLMLKTLTLGQ 134


>gi|37525839|ref|NP_929183.1| flagellar basal body rod protein FlgC [Photorhabdus luminescens
           subsp. laumondii TTO1]
 gi|36785268|emb|CAE14209.1| Flagellar basal-body rod protein FlgC (Putative proximal rod
           protein) [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 134

 Score =  126 bits (316), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 43/134 (32%), Positives = 70/134 (52%), Gaps = 2/134 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM--HGSG 59
             L++   IA S L+ QS R+ + + N+ANA +     G     ++ +          +G
Sbjct: 1   MSLLSIFDIAGSALSAQSQRLNVSASNMANADSVAGPDGQPYRAKQVVFRVAAPAGQETG 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GVRV +I  D + F  E+ PGHP+A+  G V+ PNV+V+ E  +    +R Y AN++ + 
Sbjct: 61  GVRVSEIVDDPTPFRLEYQPGHPLADEKGYVRMPNVDVVGEMINTISASRSYQANVEVLN 120

Query: 120 QSHDMMTTTLDLLR 133
            +  MM  TL L +
Sbjct: 121 TTKSMMLKTLTLGQ 134


>gi|160903121|ref|YP_001568702.1| flagellar basal-body rod protein FlgC [Petrotoga mobilis SJ95]
 gi|160360765|gb|ABX32379.1| flagellar basal-body rod protein FlgC [Petrotoga mobilis SJ95]
          Length = 140

 Score =  124 bits (312), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 51/139 (36%), Positives = 67/139 (48%), Gaps = 6/139 (4%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV------ 54
           MD L     IA SG+  +  R+ +IS+N+AN+ TT    G    R+  I  E +      
Sbjct: 2   MDGLFKVLDIAASGMTAERFRLDVISQNLANSDTTRTEEGGPYRRKAVIFQEALSESTNG 61

Query: 55  MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
               GGV+V  I  D S F   +DP HP A+A G V YPNVNVL E  DM    R Y  N
Sbjct: 62  DRNFGGVKVSSIVEDPSPFRLVYDPNHPDADAEGYVSYPNVNVLREMVDMMSAQRAYEMN 121

Query: 115 LQTIKQSHDMMTTTLDLLR 133
              +  +  M  + L + R
Sbjct: 122 AAVVNSAKSMYNSALGIGR 140


>gi|56419752|ref|YP_147070.1| flagellar basal body rod protein FlgC [Geobacillus kaustophilus
           HTA426]
 gi|56379594|dbj|BAD75502.1| flagellar basal-body rod protein [Geobacillus kaustophilus HTA426]
          Length = 150

 Score =  124 bits (312), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 50/150 (33%), Positives = 69/150 (46%), Gaps = 18/150 (12%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGD---TPGSDPYRRKTISFEEVMHG- 57
             L  S +I+ S L  Q  RM +I+ NIAN  TT         +PYRRK +  E      
Sbjct: 1   MSLFQSLNISASALTAQRLRMDVIASNIANVDTTRARLVNGEWEPYRRKMVIIEPRSGSF 60

Query: 58  --------------SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETAD 103
                          GGVRV++I  D + F   +DP HP A A G V+ PNV+ L E  D
Sbjct: 61  SGYLQAALGRADAVDGGVRVREIVDDPAPFKLVYDPNHPDAGADGYVRLPNVDPLKEMVD 120

Query: 104 MRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +    R Y AN+  +  S  M+   L++ +
Sbjct: 121 LIGATRSYEANVTVLNASKGMLMKALEIGK 150


>gi|297530608|ref|YP_003671883.1| flagellar basal-body rod protein FlgC [Geobacillus sp. C56-T3]
 gi|297253860|gb|ADI27306.1| flagellar basal-body rod protein FlgC [Geobacillus sp. C56-T3]
          Length = 150

 Score =  124 bits (311), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 50/150 (33%), Positives = 69/150 (46%), Gaps = 18/150 (12%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGD---TPGSDPYRRKTISFEEVMHG- 57
             L  S +I+ S L  Q  RM +I+ NIAN  TT         +PYRRK +  E      
Sbjct: 1   MSLFQSLNISASALTAQRLRMDVIASNIANVDTTRARLVNGEWEPYRRKMVIIEPQSGSF 60

Query: 58  --------------SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETAD 103
                          GGVRV++I  D + F   +DP HP A A G V+ PNV+ L E  D
Sbjct: 61  SGYLQAALGRADAVDGGVRVREIVDDPAPFKLVYDPNHPDAGADGYVRLPNVDPLKEMVD 120

Query: 104 MRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +    R Y AN+  +  S  M+   L++ +
Sbjct: 121 LIGATRSYEANVTVLNASKGMLMKALEIGK 150


>gi|261419417|ref|YP_003253099.1| flagellar basal body rod protein FlgC [Geobacillus sp. Y412MC61]
 gi|319766232|ref|YP_004131733.1| flagellar basal-body rod protein FlgC [Geobacillus sp. Y412MC52]
 gi|261375874|gb|ACX78617.1| flagellar basal-body rod protein FlgC [Geobacillus sp. Y412MC61]
 gi|317111098|gb|ADU93590.1| flagellar basal-body rod protein FlgC [Geobacillus sp. Y412MC52]
          Length = 150

 Score =  124 bits (310), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 49/150 (32%), Positives = 69/150 (46%), Gaps = 18/150 (12%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGD---TPGSDPYRRKTISFEEVMHG- 57
             L  S +I+ S L  Q  RM +I+ NIAN  TT         +PYRRK +  E      
Sbjct: 1   MSLFQSLNISASALTAQRLRMDVIASNIANVDTTRARLVNGEWEPYRRKMVIIEPQSGSF 60

Query: 58  --------------SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETAD 103
                          GGV+V++I  D + F   +DP HP A A G V+ PNV+ L E  D
Sbjct: 61  SGYLQAALGRADAVDGGVQVREIVDDPAPFKLVYDPNHPDAGADGYVRLPNVDPLKEMVD 120

Query: 104 MRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +    R Y AN+  +  S  M+   L++ +
Sbjct: 121 LIGATRSYEANVTVLNASKGMLMKALEIGK 150


>gi|138894738|ref|YP_001125191.1| flagellar basal body rod protein FlgC [Geobacillus
           thermodenitrificans NG80-2]
 gi|196247641|ref|ZP_03146343.1| flagellar basal-body rod protein FlgC [Geobacillus sp. G11MC16]
 gi|134266251|gb|ABO66446.1| Flagellar basal-body rod protein [Geobacillus thermodenitrificans
           NG80-2]
 gi|196212425|gb|EDY07182.1| flagellar basal-body rod protein FlgC [Geobacillus sp. G11MC16]
          Length = 150

 Score =  124 bits (310), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 48/150 (32%), Positives = 67/150 (44%), Gaps = 18/150 (12%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGD---TPGSDPYRRKTISFEEVMHG- 57
             +  S +I+ S L  Q  RM +IS NIAN  TT         +PYRRK +  E      
Sbjct: 1   MSMFQSLNISASALTAQRLRMDVISSNIANVDTTRARLVNGEWEPYRRKVVVVEPRGEQF 60

Query: 58  --------------SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETAD 103
                           GVRV++I  D + F   +DP HP A   G V+ PNV+ L E  D
Sbjct: 61  SSYLQAALGRTDAVGSGVRVREIVDDPAPFKLLYDPDHPDAGDDGYVRLPNVDPLKEMVD 120

Query: 104 MRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +    R Y AN+  +  S  M+   L++ +
Sbjct: 121 LIGATRSYEANVTALNASKGMLMKALEIGK 150


>gi|226944490|ref|YP_002799563.1| flagellar basal-body rod protein [Azotobacter vinelandii DJ]
 gi|226719417|gb|ACO78588.1| flagellar basal-body rod protein [Azotobacter vinelandii DJ]
          Length = 135

 Score =  124 bits (310), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 43/133 (32%), Positives = 64/133 (48%), Gaps = 2/133 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--G 59
             +     IA S L+ QS RM + + N+AN  + G   G     ++ +        S  G
Sbjct: 1   MSMFNIFDIAGSALSAQSQRMNVTASNLANVDSVGSEDGQAYRAKQVLFESMARGRSDTG 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GVRV ++  D S   +E+ P HP+AN  G V  PNV  + E  +M   +R Y AN++ + 
Sbjct: 61  GVRVVQVVEDPSPLRQEYRPEHPLANEEGYVSLPNVEPVHEMVNMIAASRSYQANVEVMN 120

Query: 120 QSHDMMTTTLDLL 132
            S  M+  TL L 
Sbjct: 121 TSKQMLLKTLTLG 133


>gi|209963543|ref|YP_002296458.1| flagellar basal-body rod protein FlgC, putative [Rhodospirillum
           centenum SW]
 gi|209957009|gb|ACI97645.1| flagellar basal-body rod protein FlgC, putative [Rhodospirillum
           centenum SW]
          Length = 137

 Score =  123 bits (309), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 70/136 (51%), Positives = 94/136 (69%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-- 58
           MD L +S  IA SG+  Q+ R+++++EN+ANA +TG+TPG+DPYRRKTI F+ V+  +  
Sbjct: 1   MDPLASSFGIAASGMKAQATRLRVVAENMANASSTGETPGADPYRRKTIVFDSVLDRALR 60

Query: 59  -GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
              VRVK IG D S F   ++PGHP A+A G VK PNVN LVE  DMRE  R Y ANL  
Sbjct: 61  ADTVRVKTIGRDSSDFRLSYEPGHPAADAKGYVKLPNVNTLVEMMDMREAGRSYEANLNV 120

Query: 118 IKQSHDMMTTTLDLLR 133
           ++Q+  M+  T+D+LR
Sbjct: 121 LQQARGMLGRTIDMLR 136


>gi|254470324|ref|ZP_05083728.1| flagellar basal-body rod protein FlgC [Pseudovibrio sp. JE062]
 gi|211960635|gb|EEA95831.1| flagellar basal-body rod protein FlgC [Pseudovibrio sp. JE062]
          Length = 136

 Score =  123 bits (309), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 65/135 (48%), Positives = 81/135 (60%), Gaps = 3/135 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
              I S  IA SGL  Q+ RM++I+ENIANA +TG TPG DPYRRK  +F          
Sbjct: 1   MDFIKSMFIAASGLKAQTGRMRVIAENIANADSTGQTPGEDPYRRKVPTFSSSFDAKVEA 60

Query: 62  ---RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
              ++ ++  D+S F   ++P HP AN  G VK PNVN LVE ADM+E  R Y ANL  +
Sbjct: 61  ELVKLGRVREDKSEFKLRYEPDHPAANDKGYVKMPNVNTLVEMADMQEATRSYEANLNVV 120

Query: 119 KQSHDMMTTTLDLLR 133
           K S  MM  TLD+LR
Sbjct: 121 KSSRSMMQKTLDILR 135


>gi|23016761|ref|ZP_00056514.1| COG1558: Flagellar basal body rod protein [Magnetospirillum
           magnetotacticum MS-1]
          Length = 138

 Score =  123 bits (309), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 64/136 (47%), Positives = 85/136 (62%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD L+ S+ IA SGL VQS R+++ISEN+ANA +   TP   PY+RKT++F+  +    G
Sbjct: 3   MDPLMNSSKIAKSGLKVQSQRLRVISENLANADSLAQTPEGLPYQRKTVTFKNELDREMG 62

Query: 61  VR---VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
            +   V K+  D + F   +DP HP A+  G V  PNVN L+E  DMRE  R Y ANLQ 
Sbjct: 63  TKLVKVDKVRPDNAEFQRRYDPKHPAADRDGYVLAPNVNPLIEMMDMREAQRSYEANLQV 122

Query: 118 IKQSHDMMTTTLDLLR 133
           I+ S  MM  T+DLL+
Sbjct: 123 IQTSRTMMDRTMDLLK 138


>gi|226327748|ref|ZP_03803266.1| hypothetical protein PROPEN_01621 [Proteus penneri ATCC 35198]
 gi|225203452|gb|EEG85806.1| hypothetical protein PROPEN_01621 [Proteus penneri ATCC 35198]
          Length = 134

 Score =  123 bits (308), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 39/134 (29%), Positives = 67/134 (50%), Gaps = 2/134 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM--HGSG 59
             L +   I+ S L+ QS R+ + + N+ANA +     G     ++ +           G
Sbjct: 1   MSLFSIFDISGSALSAQSQRLNVSASNMANADSVAGPDGEPYRAKQVVFQVNAPAGQEVG 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GVRV ++  D + F  E+ PGHP A+  G V+ PNV+V+ E  +    +R Y AN++ + 
Sbjct: 61  GVRVTEVVDDPAPFRMEYQPGHPFADEKGYVRMPNVDVVGEMINTISASRSYQANVEVMN 120

Query: 120 QSHDMMTTTLDLLR 133
            +  +M  TL + +
Sbjct: 121 TAKSLMQKTLMIGQ 134


>gi|222084863|ref|YP_002543392.1| flagellar basal-body rod protein [Agrobacterium radiobacter K84]
 gi|221722311|gb|ACM25467.1| flagellar basal-body rod protein [Agrobacterium radiobacter K84]
          Length = 138

 Score =  123 bits (307), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 77/137 (56%), Positives = 104/137 (75%), Gaps = 3/137 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD L A+  IA SGL  QS R++++SENIANAR+TGDTPG+DPYRRKT++F   +  + G
Sbjct: 1   MDPLSAALKIAGSGLEAQSTRLRVVSENIANARSTGDTPGADPYRRKTVTFGAELDRANG 60

Query: 61  ---VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
              V VKK+G D   FVE++DP +P A+  G VK PNVN+LVE ADMRE NR Y ANLQT
Sbjct: 61  VTTVGVKKMGEDTGKFVEQYDPDNPAADQKGYVKMPNVNILVEMADMREANRSYEANLQT 120

Query: 118 IKQSHDMMTTTLDLLRD 134
           ++Q+ D++++T+DLL++
Sbjct: 121 VRQARDLISSTIDLLKN 137


>gi|197285512|ref|YP_002151384.1| flagellar basal-body rod protein [Proteus mirabilis HI4320]
 gi|227356003|ref|ZP_03840395.1| flagellar basal-body rod protein [Proteus mirabilis ATCC 29906]
 gi|194682999|emb|CAR43448.1| flagellar basal-body rod protein [Proteus mirabilis HI4320]
 gi|227163991|gb|EEI48893.1| flagellar basal-body rod protein [Proteus mirabilis ATCC 29906]
          Length = 134

 Score =  123 bits (307), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 36/134 (26%), Positives = 65/134 (48%), Gaps = 2/134 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM--HGSG 59
             L +   I+ S L+ QS R+ + + N+AN  +     G     ++ +           G
Sbjct: 1   MSLFSIFDISGSALSAQSQRLNVSASNMANVDSVVGPDGEPYRAKQVVFQVNAPAGQDIG 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GV V ++  D + F  E+ PG+P A+  G V+ PNV+V+ E  +    +R Y AN++ + 
Sbjct: 61  GVHVTQVVDDPTPFRMEYQPGNPFADEKGYVRKPNVDVVGEMINTISASRSYQANVEVMN 120

Query: 120 QSHDMMTTTLDLLR 133
            +  +M  TL + +
Sbjct: 121 TAKSLMQKTLMIGQ 134


>gi|1857438|gb|AAC45656.1| FlgC [Proteus mirabilis]
          Length = 134

 Score =  123 bits (307), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 36/134 (26%), Positives = 65/134 (48%), Gaps = 2/134 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM--HGSG 59
             L +   I+ S L+ QS R+ + + N+AN  +     G     ++ +           G
Sbjct: 1   MSLFSIFDISGSALSAQSQRLNVSASNMANVDSVVGPDGEPYRAKQVVFQVNAPAGQEIG 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GV V ++  D + F  E+ PG+P A+  G V+ PNV+V+ E  +    +R Y AN++ + 
Sbjct: 61  GVHVTQVVDDPTPFRMEYQPGNPFADEKGYVRKPNVDVVGEMINTISASRSYQANVEVMN 120

Query: 120 QSHDMMTTTLDLLR 133
            +  +M  TL + +
Sbjct: 121 TAKSLMQKTLMIGQ 134


>gi|251789166|ref|YP_003003887.1| flagellar basal body rod protein FlgC [Dickeya zeae Ech1591]
 gi|271500064|ref|YP_003333089.1| flagellar basal-body rod protein FlgC [Dickeya dadantii Ech586]
 gi|307131611|ref|YP_003883627.1| flagellar basal-body rod protein flgC [Dickeya dadantii 3937]
 gi|247537787|gb|ACT06408.1| flagellar basal-body rod protein FlgC [Dickeya zeae Ech1591]
 gi|270343619|gb|ACZ76384.1| flagellar basal-body rod protein FlgC [Dickeya dadantii Ech586]
 gi|306529140|gb|ADM99070.1| Flagellar basal-body rod protein flgC [Dickeya dadantii 3937]
          Length = 134

 Score =  122 bits (306), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 38/134 (28%), Positives = 68/134 (50%), Gaps = 2/134 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM--HGSG 59
             L+    I+ S L+ QS R+ + + N+ANA +     G     ++ +   +      +G
Sbjct: 1   MSLLNIFDISGSALSAQSQRLNVSASNLANADSVTGPDGQPYRAKQVVFEVDAAPGQATG 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GV+V K+  D S     + PG+P+A+A G V+ PNV+ + E  +    +R Y AN++ + 
Sbjct: 61  GVKVAKVVEDPSPEKLVYQPGNPLADAKGYVRMPNVDPVNEMVNTISASRSYQANVEVLN 120

Query: 120 QSHDMMTTTLDLLR 133
            +  MM  TL + +
Sbjct: 121 TTKSMMLKTLTIGQ 134


>gi|302389656|ref|YP_003825477.1| flagellar basal-body rod protein FlgC [Thermosediminibacter oceani
           DSM 16646]
 gi|302200284|gb|ADL07854.1| flagellar basal-body rod protein FlgC [Thermosediminibacter oceani
           DSM 16646]
          Length = 147

 Score =  122 bits (306), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 50/146 (34%), Positives = 65/146 (44%), Gaps = 14/146 (9%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF---------- 51
             +  S  I+ SGL  Q  RM +IS NIAN  TT    G    R++ I            
Sbjct: 1   MEIFRSLEISASGLTAQRLRMDVISNNIANVNTTRTEEGGPYRRQRVIFQERKRGLTFKD 60

Query: 52  ----EEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                       GVRV  I  D S F   +DP HP A+  G V+ PNVN++ E  DM   
Sbjct: 61  VISGMSSTQPGAGVRVVSIEKDPSPFKLVYDPSHPDADQMGYVRMPNVNIVTEMVDMISA 120

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y AN+  I  +  M+T  L++ R
Sbjct: 121 TRSYEANITAINSAKGMITKALEIGR 146


>gi|300722684|ref|YP_003711974.1| flagellar basal-body rod cell-proximal protein [Xenorhabdus
           nematophila ATCC 19061]
 gi|297629191|emb|CBJ89787.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
           [Xenorhabdus nematophila ATCC 19061]
          Length = 134

 Score =  122 bits (306), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 40/134 (29%), Positives = 70/134 (52%), Gaps = 2/134 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM--HGSG 59
             L++   IA+S L+ QS R+ + + N+ANA +     G     ++ +           G
Sbjct: 1   MSLLSIFDIASSALSAQSQRLNVSASNMANADSVVGPDGEPYRAKQVVFRVAAPAGQEIG 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GVRV ++  D + F  E+ PG+P+A+  G V+ PNV+V+ E  +    +R Y AN++ + 
Sbjct: 61  GVRVSEVVDDPTPFRLEYKPGNPLADEKGYVRMPNVDVVGEMVNTISASRSYQANVEVLN 120

Query: 120 QSHDMMTTTLDLLR 133
            +  +M  TL L +
Sbjct: 121 TTKSIMLKTLTLGQ 134


>gi|144900468|emb|CAM77332.1| Flagellar basal-body rod protein FlgC [Magnetospirillum
           gryphiswaldense MSR-1]
          Length = 137

 Score =  121 bits (304), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 56/136 (41%), Positives = 82/136 (60%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD L  ++ IA SG+  QS R+++ISEN+ANA +   TP   PY+RK ++F+  +  + G
Sbjct: 1   MDELQKASKIAISGMKAQSERLRVISENLANADSLARTPDGTPYKRKVVTFKSELDRANG 60

Query: 61  V---RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
               +V K+  D S F   +DP HP A+  G V  PNVN L+E  DMRE  R Y AN+  
Sbjct: 61  YTGVKVDKVRPDASEFQRRYDPKHPAADRDGYVLAPNVNPLIEMMDMREAQRSYEANMNV 120

Query: 118 IKQSHDMMTTTLDLLR 133
           I  S  +++ T+++LR
Sbjct: 121 INSSRQLLSRTVEMLR 136


>gi|289578436|ref|YP_003477063.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter italicus
           Ab9]
 gi|297544712|ref|YP_003677014.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter mathranii
           subsp. mathranii str. A3]
 gi|289528149|gb|ADD02501.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter italicus
           Ab9]
 gi|296842487|gb|ADH61003.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter mathranii
           subsp. mathranii str. A3]
          Length = 147

 Score =  121 bits (304), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 50/146 (34%), Positives = 72/146 (49%), Gaps = 14/146 (9%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR-------KTISFEEV 54
             L +S  I+ SGL  +  RM +IS+NIAN  TT  + G    R+       +  SFE +
Sbjct: 1   MNLFSSMDISASGLTAERVRMDVISQNIANVNTTRTSQGGPYRRKLVVLKEIQPDSFESI 60

Query: 55  MHGSGGVR-------VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
           +    G         V+    DQ+   E +DPGHP A+ +G V+YPNVN++ E  DM   
Sbjct: 61  LDKVKGKYSGKGVEVVQIAEDDQTPLREVYDPGHPDADQNGYVEYPNVNIVSEMVDMISA 120

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y AN+     S  M   +L++ R
Sbjct: 121 TRAYEANVTAFNASKAMFQKSLEIGR 146


>gi|290474970|ref|YP_003467854.1| flagellar basal body rod cell-proximal protein [Xenorhabdus
           bovienii SS-2004]
 gi|289174287|emb|CBJ81077.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
           [Xenorhabdus bovienii SS-2004]
          Length = 134

 Score =  121 bits (304), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 40/134 (29%), Positives = 70/134 (52%), Gaps = 2/134 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM--HGSG 59
             L++   IA+S L+ QS R+ + + N+ANA +     G     ++ +           G
Sbjct: 1   MSLLSIFDIASSALSAQSQRLNVSASNMANADSVVGPDGEPYRAKQVVFRVAAPAGQEIG 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GVRV ++  D + F  E+ PG+P+A+  G V+ PNV+V+ E  +    +R Y AN++ + 
Sbjct: 61  GVRVSEVVDDPTPFRLEYRPGNPLADEKGYVRMPNVDVVGEMVNTISASRSYQANIEVLN 120

Query: 120 QSHDMMTTTLDLLR 133
            +  +M  TL L +
Sbjct: 121 TTKSIMLKTLTLGQ 134


>gi|307718596|ref|YP_003874128.1| hypothetical protein STHERM_c09080 [Spirochaeta thermophila DSM
           6192]
 gi|306532321|gb|ADN01855.1| hypothetical protein STHERM_c09080 [Spirochaeta thermophila DSM
           6192]
 gi|315186391|gb|EFU20151.1| flagellar basal-body rod protein FlgC [Spirochaeta thermophila DSM
           6578]
          Length = 152

 Score =  121 bits (303), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 53/152 (34%), Positives = 71/152 (46%), Gaps = 20/152 (13%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPG--------------SDPYRRK 47
             L    +IA +GL  Q  RM +IS NIANA TT  T G                PY R 
Sbjct: 1   MGLFTPINIAATGLTAQRLRMDVISNNIANATTTRTTEGGPFRRSRVVFRPRVEQPYWRS 60

Query: 48  TISFEEVMHGSG-GVRVKKIGVD-QSTFVEEFDPGHPVA----NASGIVKYPNVNVLVET 101
               + + +G G GVRV K+  D  +     +DP HP A       G V+YPNVN++ E 
Sbjct: 61  PFLPKPLDNGLGKGVRVVKVEKDYDAKTRLVYDPTHPDAIKSGPLKGYVEYPNVNIVNEM 120

Query: 102 ADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            D+ + +R Y ANL  +  S  M    L++ R
Sbjct: 121 VDLIDASRAYEANLAVVNGSKTMFLKALEIGR 152


>gi|254502506|ref|ZP_05114657.1| flagellar basal-body rod protein FlgC [Labrenzia alexandrii DFL-11]
 gi|222438577|gb|EEE45256.1| flagellar basal-body rod protein FlgC [Labrenzia alexandrii DFL-11]
          Length = 136

 Score =  121 bits (303), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 59/135 (43%), Positives = 81/135 (60%), Gaps = 3/135 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             L+ S  I+ SGL  Q+ RM++I+ENIANA +T  TP  +PYRRK  +F+       G 
Sbjct: 1   MDLMKSLFISASGLKAQNGRMRVIAENIANANSTARTPDEEPYRRKIPTFQSEFDKQLGA 60

Query: 62  ---RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
               + +I  D+S F     PGHP A+ +G V  PNV+ LVE+ADMRE  R Y ANL  I
Sbjct: 61  DKVELGRIVEDKSAFKSTHMPGHPAADENGYVLQPNVSTLVESADMREAQRSYEANLNVI 120

Query: 119 KQSHDMMTTTLDLLR 133
           + +  M+  T+D+LR
Sbjct: 121 ETTRKMLQRTIDILR 135


>gi|291288218|ref|YP_003505034.1| flagellar basal-body rod protein FlgC [Denitrovibrio acetiphilus
           DSM 12809]
 gi|290885378|gb|ADD69078.1| flagellar basal-body rod protein FlgC [Denitrovibrio acetiphilus
           DSM 12809]
          Length = 134

 Score =  121 bits (303), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 39/133 (29%), Positives = 68/133 (51%), Gaps = 1/133 (0%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG-SGG 60
                   +A +G++ Q  R+  IS N+ANA TT    G    R+  I  + +    +GG
Sbjct: 1   MSFFDVLGVAGTGMSAQRIRISAISANLANANTTRTDDGGPYVRQDVIFKQVLEGELAGG 60

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V+V ++  D+   + +++PGHP A+  G V YPN+N + E  +M E ++ Y AN   +  
Sbjct: 61  VKVTEVVKDEKPPILKYEPGHPDADEEGYVAYPNINPIEEMVNMLEASKSYEANTTVVST 120

Query: 121 SHDMMTTTLDLLR 133
           +  +    L++ R
Sbjct: 121 AKQLAMKALEIGR 133


>gi|254780380|ref|YP_003064793.1| flagellar basal body rod protein FlgC [Candidatus Liberibacter
           asiaticus str. psy62]
 gi|254040057|gb|ACT56853.1| flagellar basal body rod protein FlgC [Candidatus Liberibacter
           asiaticus str. psy62]
          Length = 134

 Score =  121 bits (303), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 134/134 (100%), Positives = 134/134 (100%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG
Sbjct: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ
Sbjct: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120

Query: 121 SHDMMTTTLDLLRD 134
           SHDMMTTTLDLLRD
Sbjct: 121 SHDMMTTTLDLLRD 134


>gi|167037671|ref|YP_001665249.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|167040332|ref|YP_001663317.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter sp. X514]
 gi|256750738|ref|ZP_05491623.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter
           ethanolicus CCSD1]
 gi|300914416|ref|ZP_07131732.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter sp. X561]
 gi|307264864|ref|ZP_07546426.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter wiegelii
           Rt8.B1]
 gi|307724348|ref|YP_003904099.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter sp. X513]
 gi|320116086|ref|YP_004186245.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter brockii
           subsp. finnii Ako-1]
 gi|326389485|ref|ZP_08211052.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter
           ethanolicus JW 200]
 gi|166854572|gb|ABY92981.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter sp. X514]
 gi|166856505|gb|ABY94913.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|256750321|gb|EEU63340.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter
           ethanolicus CCSD1]
 gi|300889351|gb|EFK84497.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter sp. X561]
 gi|306920122|gb|EFN50334.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter wiegelii
           Rt8.B1]
 gi|307581409|gb|ADN54808.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter sp. X513]
 gi|319929177|gb|ADV79862.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter brockii
           subsp. finnii Ako-1]
 gi|325994490|gb|EGD52915.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter
           ethanolicus JW 200]
          Length = 147

 Score =  121 bits (303), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 50/146 (34%), Positives = 71/146 (48%), Gaps = 14/146 (9%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR-------KTISFEEV 54
             L +S  I+ SGL  +  RM II++NIAN  TT    G    R+       +  SFE +
Sbjct: 1   MNLFSSMDISASGLTAERLRMDIIAQNIANVNTTRTVQGGPYRRKLVVLKEIQPDSFESI 60

Query: 55  MHGSGGVR-------VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
           +    G         V+    DQ+   E +DPGHP A+ +G V+YPNVN++ E  DM   
Sbjct: 61  LDKVKGKYSGKGVEVVQIAEDDQTPLREVYDPGHPDADQNGYVEYPNVNIVSEMVDMISA 120

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y AN+     S  M   +L++ R
Sbjct: 121 TRAYEANVTAFNASKAMFQKSLEIGR 146


>gi|261344144|ref|ZP_05971788.1| flagellar basal-body rod protein FlgC [Providencia rustigianii DSM
           4541]
 gi|282567736|gb|EFB73271.1| flagellar basal-body rod protein FlgC [Providencia rustigianii DSM
           4541]
          Length = 134

 Score =  121 bits (302), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 40/134 (29%), Positives = 67/134 (50%), Gaps = 2/134 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM--HGSG 59
             L++   I+ S L  QS R+ + + N+ANA +     G     ++ +        H  G
Sbjct: 1   MALLSIFDISASALTAQSQRLNVSASNMANAESVAGPDGQPYRAKQVVFQMAPQGRHQVG 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GVRV ++  D S    E+ PGHP+A+  G V+ PNV+ + E  +    +R Y ANL+ + 
Sbjct: 61  GVRVSELIEDPSPPRMEYKPGHPLADEKGYVQMPNVDTVGEMINTISASRSYQANLEVMN 120

Query: 120 QSHDMMTTTLDLLR 133
            +  ++  TL L +
Sbjct: 121 TAKTLLQKTLTLGQ 134


>gi|212709490|ref|ZP_03317618.1| hypothetical protein PROVALCAL_00532 [Providencia alcalifaciens DSM
           30120]
 gi|212687828|gb|EEB47356.1| hypothetical protein PROVALCAL_00532 [Providencia alcalifaciens DSM
           30120]
          Length = 134

 Score =  121 bits (302), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 39/134 (29%), Positives = 68/134 (50%), Gaps = 2/134 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM--HGSG 59
             L++   I++S L  QS R+ + + N+ANA +     G     ++ +        +  G
Sbjct: 1   MGLLSIFDISSSALTAQSQRLNVSASNMANAESVVGPDGEPYRAKQVVFQMAPQGRNQVG 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GVRV ++  D +    E+ PGHP+A+  G VK PNV+ + E  +    +R Y ANL+ + 
Sbjct: 61  GVRVSELIDDPAPPRMEYKPGHPLADEKGYVKMPNVDTVGEMINTISASRSYQANLEVMN 120

Query: 120 QSHDMMTTTLDLLR 133
            +  ++  TL L +
Sbjct: 121 TAKTLLQKTLTLGQ 134


>gi|220932527|ref|YP_002509435.1| flagellar basal-body rod protein FlgC [Halothermothrix orenii H
           168]
 gi|219993837|gb|ACL70440.1| flagellar basal-body rod protein FlgC [Halothermothrix orenii H
           168]
          Length = 145

 Score =  121 bits (302), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 47/144 (32%), Positives = 65/144 (45%), Gaps = 14/144 (9%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---- 59
           ++ S +I+ SGL  Q  RM II++NIAN  TT    G    R+  +  E           
Sbjct: 1   MLDSLNISASGLTAQRLRMDIIADNIANVNTTRTEDGGPYRRKLPVFREREADSFARVFQ 60

Query: 60  ----------GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNR 109
                     GV V  I  D S F   ++PGHP AN  G V  PNVN+  E  DM   +R
Sbjct: 61  SKLGKDTDRRGVEVVGIREDDSPFKMVYNPGHPDANEEGYVAMPNVNITTEMVDMISASR 120

Query: 110 LYMANLQTIKQSHDMMTTTLDLLR 133
            Y AN+  +  + +M    L + +
Sbjct: 121 AYEANVTALNTAKNMALKALQIGQ 144


>gi|163856433|ref|YP_001630731.1| flagellar basal body rod protein FlgC [Bordetella petrii DSM 12804]
 gi|163260161|emb|CAP42463.1| flagellar basal-body rod protein FlgC [Bordetella petrii]
          Length = 139

 Score =  121 bits (302), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 44/139 (31%), Positives = 65/139 (46%), Gaps = 6/139 (4%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRK------TISFEEVM 55
             L +   IA S L  QS RM + + N+ANA +     G     R+        + +   
Sbjct: 1   MSLTSIFDIAGSALQAQSQRMNVSASNLANADSAVGPDGQPYRARQVVFQVNPPAGQAYG 60

Query: 56  HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
              GGVRV  +  D S     +DP HP+AN  G V  PNV+ + ET +M   +R Y AN+
Sbjct: 61  REIGGVRVAGVVQDPSPPKLIYDPSHPLANPQGYVTMPNVDPVAETVNMIAASRSYQANV 120

Query: 116 QTIKQSHDMMTTTLDLLRD 134
           + +  +  +M  TL L + 
Sbjct: 121 EVLNTAKQLMMKTLTLGQS 139


>gi|296133051|ref|YP_003640298.1| flagellar basal-body rod protein FlgC [Thermincola sp. JR]
 gi|296031629|gb|ADG82397.1| flagellar basal-body rod protein FlgC [Thermincola potens JR]
          Length = 145

 Score =  120 bits (301), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 50/145 (34%), Positives = 70/145 (48%), Gaps = 13/145 (8%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE--------- 52
             +  S  I+ SGL  Q  RM +ISENIAN  TT    G    R+  +            
Sbjct: 1   MGMFDSFDISASGLTAQRLRMDLISENIANVNTTRTASGGPYRRKLAVFEAKNGDFDKVF 60

Query: 53  ----EVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
               + +    GVRV KI  DQS     ++P HP ANA G V+ PNVN++ E  DM    
Sbjct: 61  QERLDSVSPGKGVRVTKIIEDQSPLKLVYNPNHPDANAQGYVEMPNVNIVTEMVDMISAT 120

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R Y AN+ +I+ + +M    +++ R
Sbjct: 121 RAYEANVASIRATKEMFAKAMEIGR 145


>gi|188586015|ref|YP_001917560.1| flagellar basal-body rod protein FlgC [Natranaerobius thermophilus
           JW/NM-WN-LF]
 gi|179350702|gb|ACB84972.1| flagellar basal-body rod protein FlgC [Natranaerobius thermophilus
           JW/NM-WN-LF]
          Length = 146

 Score =  120 bits (301), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 49/146 (33%), Positives = 65/146 (44%), Gaps = 16/146 (10%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
           +  +  I+ SGL  +  RM +IS NIANA TT    G    R+  +        S     
Sbjct: 1   MFDTFDISGSGLTAERLRMDVISNNIANANTTRTEDGEPYRRQMPVFETRGKSFSDHLHS 60

Query: 59  ----------GGVRVKKIGVDQSTFVEEFDPGHPVANASG-IVKYPNVNVLVETADMRET 107
                      GVRV  I  D S F E +DP HP A+     V+ PNV ++ E  DM   
Sbjct: 61  FLQKDGDFDSQGVRVSSIEEDDSPFKEIYDPEHPEADPETGYVQKPNVEIVKEMTDMITA 120

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
           +R Y AN   I  +  M + TLD+ R
Sbjct: 121 SRAYEANATAIDNAKSMASNTLDIGR 146


>gi|203284214|ref|YP_002221954.1| flagellar basal-body rod protein [Borrelia duttonii Ly]
 gi|203287753|ref|YP_002222768.1| flagellar basal-body rod protein [Borrelia recurrentis A1]
 gi|201083657|gb|ACH93248.1| flagellar basal-body rod protein [Borrelia duttonii Ly]
 gi|201084973|gb|ACH94547.1| flagellar basal-body rod protein [Borrelia recurrentis A1]
          Length = 154

 Score =  120 bits (301), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 50/152 (32%), Positives = 72/152 (47%), Gaps = 19/152 (12%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSD--------------PYRRK 47
             L +S + A++GL  Q  R+ +I+ NIAN  TT    G                PY + 
Sbjct: 3   MGLFSSINTASTGLTAQRLRLDVIANNIANVETTRTADGGAYRRERIIFAPRVVSPYWKG 62

Query: 48  TISFEEVMHGSG-GVRVKKIGVDQSTFVEEFDPGHPVANA----SGIVKYPNVNVLVETA 102
               + + +G G GVRV  I  D+S    ++DP HP A       G V++PNVNV+ E  
Sbjct: 63  PFVPDYLDNGVGQGVRVSGIEKDKSPLKLQYDPTHPDAIKSGELKGYVEFPNVNVVEEMV 122

Query: 103 DMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
           DM   +R Y AN   I  S  M  + L +L++
Sbjct: 123 DMISASRAYEANSSVINSSKSMFRSALSILQN 154


>gi|241203104|ref|YP_002974200.1| flagellar basal body rod protein FlgC [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240856994|gb|ACS54661.1| flagellar basal-body rod protein FlgC [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 138

 Score =  120 bits (301), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 83/137 (60%), Positives = 105/137 (76%), Gaps = 3/137 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD L A+  IA SGL  QS R++I+SENIANAR+TGDTPG+DPYRRKTI+F + M  + G
Sbjct: 1   MDPLSAAMKIAGSGLEAQSTRLRIVSENIANARSTGDTPGADPYRRKTITFGQQMDRTNG 60

Query: 61  ---VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
              V VKK+GVD+  F  EFDP +P A+  G+VK PNVN+LVE ADMRE NR Y ANLQT
Sbjct: 61  VETVGVKKVGVDEGDFSTEFDPSNPAADPKGVVKLPNVNILVEMADMREANRSYDANLQT 120

Query: 118 IKQSHDMMTTTLDLLRD 134
           IKQ+ D++++T+DLL+ 
Sbjct: 121 IKQTRDLISSTIDLLKS 137


>gi|219684534|ref|ZP_03539477.1| flagellar basal-body rod protein FlgC [Borrelia garinii PBr]
 gi|219685765|ref|ZP_03540576.1| flagellar basal-body rod protein FlgC [Borrelia garinii Far04]
 gi|219671896|gb|EED28950.1| flagellar basal-body rod protein FlgC [Borrelia garinii PBr]
 gi|219672704|gb|EED29732.1| flagellar basal-body rod protein FlgC [Borrelia garinii Far04]
          Length = 152

 Score =  120 bits (301), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 47/152 (30%), Positives = 70/152 (46%), Gaps = 19/152 (12%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG---- 57
             L +S ++A++GL  Q  R+ +IS NIAN  T+    G    R++ I    V +     
Sbjct: 1   MGLFSSINVASTGLTAQRLRIDVISNNIANVSTSRTPDGGPYRRQRIIFAPRVSNPYWKG 60

Query: 58  -----------SGGVRVKKIGVDQSTFVEEFDPGHPVA----NASGIVKYPNVNVLVETA 102
                        GVRV  I  D+S    ++DP HP +    +  G V+ PNVN++ E  
Sbjct: 61  PFIPDYLDNGIGQGVRVASIEKDKSPLKLKYDPTHPDSISFGDKKGYVELPNVNLVEEMV 120

Query: 103 DMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
           DM   +R Y AN   I  S  M  + L +L+ 
Sbjct: 121 DMISASRAYEANSTVINSSKSMFRSALAILQS 152


>gi|294635608|ref|ZP_06714085.1| flagellar basal-body rod protein FlgC [Edwardsiella tarda ATCC
           23685]
 gi|291091060|gb|EFE23621.1| flagellar basal-body rod protein FlgC [Edwardsiella tarda ATCC
           23685]
          Length = 134

 Score =  120 bits (300), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 39/134 (29%), Positives = 67/134 (50%), Gaps = 2/134 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF--EEVMHGSG 59
             L++   I+ S L  QS RM + + N+ANA +     G     ++ +           G
Sbjct: 1   MSLLSIFDISGSALTAQSKRMNVAASNLANADSVTGPDGEPYRAKQVVFQVKPGAGEEIG 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GV+V ++  D S     + PG+P+A+A G V+ PNV+V+ E  +    +R Y AN++ + 
Sbjct: 61  GVQVSQVVDDPSPDRLVYQPGNPLADAKGYVRMPNVDVVGEMVNSIAASRSYQANVEVLN 120

Query: 120 QSHDMMTTTLDLLR 133
            +  +M  TL L +
Sbjct: 121 TTKSLMMKTLTLGQ 134


>gi|33596138|ref|NP_883781.1| flagellar basal body rod protein FlgC [Bordetella parapertussis
           12822]
 gi|33601539|ref|NP_889099.1| flagellar basal body rod protein FlgC [Bordetella bronchiseptica
           RB50]
 gi|33573141|emb|CAE36788.1| flagellar basal-body rod protein FlgC [Bordetella parapertussis]
 gi|33575975|emb|CAE33054.1| flagellar basal-body rod protein FlgC [Bordetella bronchiseptica
           RB50]
          Length = 139

 Score =  120 bits (300), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 45/139 (32%), Positives = 70/139 (50%), Gaps = 6/139 (4%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRK------TISFEEVM 55
             L++   IA S L+ QS RM + + N+ANA +     G     R+          +   
Sbjct: 1   MSLLSIFEIAGSALSAQSQRMNVSASNMANADSVAGPDGQPYRARQVVFQVNPPPGQAFG 60

Query: 56  HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
              GGVRV  +  DQS F + +DP HP+A+A G V  PNV+ + ET +M   +R Y AN+
Sbjct: 61  QEIGGVRVAGVVEDQSPFKKIYDPKHPMADAQGYVNMPNVDPVAETVNMIAASRSYQANV 120

Query: 116 QTIKQSHDMMTTTLDLLRD 134
           + +  +  +M  TL + + 
Sbjct: 121 EVLNTAKQLMLKTLTIGQS 139


>gi|20807891|ref|NP_623062.1| flagellar basal body rod protein [Thermoanaerobacter tengcongensis
           MB4]
 gi|20516456|gb|AAM24666.1| Flagellar basal body rod protein [Thermoanaerobacter tengcongensis
           MB4]
          Length = 146

 Score =  120 bits (300), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 44/146 (30%), Positives = 66/146 (45%), Gaps = 14/146 (9%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG---- 57
             L +S  I+ +GL  +  RM ++S+NIANA TT    G    R+  +  E         
Sbjct: 1   MNLFSSMDISATGLTAERVRMDVVSQNIANANTTRTVQGGPYRRKLVVFKEIQPDSFQSI 60

Query: 58  ----------SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                      G   V+ I  +Q+     +DPGHP A+  G V YPNVN++ E  DM   
Sbjct: 61  LEKVKGKYTGKGVEVVQIIEDEQTPLRRVYDPGHPDADQQGYVSYPNVNIVAEMVDMISA 120

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y AN+     +  M   +L++ +
Sbjct: 121 TRAYEANVTAFNAAKSMFQKSLEIGK 146


>gi|317129211|ref|YP_004095493.1| flagellar basal-body rod protein FlgC [Bacillus cellulosilyticus
           DSM 2522]
 gi|315474159|gb|ADU30762.1| flagellar basal-body rod protein FlgC [Bacillus cellulosilyticus
           DSM 2522]
          Length = 148

 Score =  120 bits (300), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 46/148 (31%), Positives = 68/148 (45%), Gaps = 16/148 (10%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGD---TPGSDPYRRKTISFEEVMH-- 56
             +    + + S L  Q  RM ++S N+ANA TT          PYRRK +  E+     
Sbjct: 1   MSIFHGINTSASALTAQRLRMDVVSSNMANADTTRARLVDGEWQPYRRKMVVLEQNGSGF 60

Query: 57  -----------GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
                         GV+V++I  D++ F   F P HP AN  G V+ PNV+ L E  D+ 
Sbjct: 61  SSHLDKAMGKTHGNGVKVREIVEDETPFRLVFQPDHPDANEDGYVELPNVDPLKEMIDLM 120

Query: 106 ETNRLYMANLQTIKQSHDMMTTTLDLLR 133
              R Y AN+ T+    +M+   L++ R
Sbjct: 121 SATRSYEANVTTLDAHKNMLLKALEIGR 148


>gi|187918167|ref|YP_001883730.1| flagellar basal body rod protein FlgC [Borrelia hermsii DAH]
 gi|119861015|gb|AAX16810.1| flagellar basal-body rod protein FlgC [Borrelia hermsii DAH]
          Length = 152

 Score =  120 bits (300), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 48/152 (31%), Positives = 70/152 (46%), Gaps = 19/152 (12%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG---- 57
             L +S + A++GL  Q  R+ +I+ NIAN  TT  + G    R++ I    V+      
Sbjct: 1   MGLFSSINTASTGLTAQRLRLDVIANNIANVETTRTSEGGSYRRQRVIFAPRVVSPYWKG 60

Query: 58  -----------SGGVRVKKIGVDQSTFVEEFDPGHPVANA----SGIVKYPNVNVLVETA 102
                        GVRV  I  D+S    ++DP HP A       G V++PNVN + E  
Sbjct: 61  PFVPDDLDNGVGQGVRVASIEKDKSPLKLKYDPTHPDAIRSGELKGYVEFPNVNAVEEMV 120

Query: 103 DMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
           DM   +R Y AN   I  S  M  + L +L++
Sbjct: 121 DMISASRAYEANSTVINSSKSMFRSALSILQN 152


>gi|224531802|ref|ZP_03672434.1| flagellar basal-body rod protein FlgC [Borrelia valaisiana VS116]
 gi|224511267|gb|EEF81673.1| flagellar basal-body rod protein FlgC [Borrelia valaisiana VS116]
          Length = 152

 Score =  120 bits (300), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 51/153 (33%), Positives = 73/153 (47%), Gaps = 21/153 (13%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--- 58
             L +S ++A++GL  Q  R+ +IS NIAN  T   TP   PYRR+ I F   ++     
Sbjct: 1   MGLFSSINVASTGLTAQRLRIDVISNNIANVST-SRTPDGGPYRRQRIIFAPRVNNPYWK 59

Query: 59  -------------GGVRVKKIGVDQSTFVEEFDPGHPVA----NASGIVKYPNVNVLVET 101
                         GVRV  I  D+S    ++DP HP +    +  G V+ PNVN++ E 
Sbjct: 60  GPFIPDYLDNGIGQGVRVASIEKDKSPLKLKYDPTHPDSISFGDKKGYVELPNVNLVEEM 119

Query: 102 ADMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
            DM   +R Y AN   I  S  M  + L +L+ 
Sbjct: 120 VDMISASRAYEANSTVINSSKSMFRSALAILQS 152


>gi|157362949|ref|YP_001469716.1| flagellar basal-body rod protein FlgC [Thermotoga lettingae TMO]
 gi|157313553|gb|ABV32652.1| flagellar basal-body rod protein FlgC [Thermotoga lettingae TMO]
          Length = 137

 Score =  119 bits (299), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 48/137 (35%), Positives = 71/137 (51%), Gaps = 5/137 (3%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG--- 57
           M+  +   +++ SG+  Q  R+ IIS NIAN+ TT    G+   RR  +  E ++     
Sbjct: 1   MNEFL-IMNVSASGMTAQRLRVDIISSNIANSETTRTDRGTPYRRRVPVFSEYLISDGKS 59

Query: 58  -SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
            S GV+V +I  D S F   +DP HP A+ +G V  PNVNVL E  D+    R Y AN+ 
Sbjct: 60  ASTGVKVVRIEEDPSPFRLVYDPSHPDADENGYVSLPNVNVLREMVDLISAQRSYEANIS 119

Query: 117 TIKQSHDMMTTTLDLLR 133
               +  M+ + L + R
Sbjct: 120 AFNTTKSMINSALQIGR 136


>gi|328543166|ref|YP_004303275.1| flagellar basal-body rod protein C [polymorphum gilvum SL003B-26A1]
 gi|326412912|gb|ADZ69975.1| Flagellar basal-body rod protein C [Polymorphum gilvum SL003B-26A1]
          Length = 136

 Score =  119 bits (299), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 60/135 (44%), Positives = 85/135 (62%), Gaps = 3/135 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             L+ S  I+ SGL  Q+ R+++I+EN+ANA +TG TP  DPYRRK  +F+         
Sbjct: 1   MDLVKSLFISASGLKAQNGRIRVIAENLANADSTGRTPDEDPYRRKIPTFKNRFDRDLQA 60

Query: 62  RVKKIG---VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
            + ++G    D+S F   ++PGHP A+A+G V+ PNVN LVET DMRE  R Y ANL  I
Sbjct: 61  ELVELGKLAEDRSEFPTRYEPGHPAADANGNVRVPNVNSLVETVDMREAQRSYEANLNVI 120

Query: 119 KQSHDMMTTTLDLLR 133
           + +  M+  T+D+LR
Sbjct: 121 ESTRRMLQRTIDILR 135


>gi|22126392|ref|NP_669815.1| flagellar basal body rod protein FlgC [Yersinia pestis KIM 10]
 gi|45441411|ref|NP_992950.1| flagellar basal body rod protein FlgC [Yersinia pestis biovar
           Microtus str. 91001]
 gi|51596009|ref|YP_070200.1| flagellar basal body rod protein FlgC [Yersinia pseudotuberculosis
           IP 32953]
 gi|108807171|ref|YP_651087.1| flagellar basal body rod protein FlgC [Yersinia pestis Antiqua]
 gi|108812485|ref|YP_648252.1| flagellar basal body rod protein FlgC [Yersinia pestis Nepal516]
 gi|145598612|ref|YP_001162688.1| flagellar basal body rod protein FlgC [Yersinia pestis Pestoides F]
 gi|149366253|ref|ZP_01888288.1| flagellar basal-body rod protein FlgC [Yersinia pestis CA88-4125]
 gi|153947032|ref|YP_001401292.1| flagellar basal body rod protein FlgC [Yersinia pseudotuberculosis
           IP 31758]
 gi|162420507|ref|YP_001606471.1| flagellar basal body rod protein FlgC [Yersinia pestis Angola]
 gi|165926046|ref|ZP_02221878.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165938792|ref|ZP_02227347.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|166010857|ref|ZP_02231755.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166211044|ref|ZP_02237079.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|167401147|ref|ZP_02306650.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167420240|ref|ZP_02311993.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167425758|ref|ZP_02317511.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|167469718|ref|ZP_02334422.1| flagellar basal-body rod protein FlgC [Yersinia pestis FV-1]
 gi|170024649|ref|YP_001721154.1| flagellar basal body rod protein FlgC [Yersinia pseudotuberculosis
           YPIII]
 gi|186895112|ref|YP_001872224.1| flagellar basal body rod protein FlgC [Yersinia pseudotuberculosis
           PB1/+]
 gi|218928920|ref|YP_002346795.1| flagellar basal body rod protein FlgC [Yersinia pestis CO92]
 gi|229896240|ref|ZP_04511410.1| flagellar basal-body rod protein FlgC [Yersinia pestis Pestoides A]
 gi|229897175|ref|ZP_04512331.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229897901|ref|ZP_04513052.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229902867|ref|ZP_04517984.1| flagellar basal-body rod protein FlgC [Yersinia pestis Nepal516]
 gi|270486647|ref|ZP_06203721.1| flagellar basal-body rod protein FlgC [Yersinia pestis KIM D27]
 gi|294504032|ref|YP_003568094.1| flagellar basal body rod protein [Yersinia pestis Z176003]
 gi|21959379|gb|AAM86066.1|AE013854_2 cell-proximal portion of basal-body rod protein [Yersinia pestis
           KIM 10]
 gi|45436272|gb|AAS61827.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Microtus str. 91001]
 gi|51589291|emb|CAH20912.1| flagellar basal-body rod protein FlgC [Yersinia pseudotuberculosis
           IP 32953]
 gi|108776133|gb|ABG18652.1| flagellar basal-body rod protein FlgC [Yersinia pestis Nepal516]
 gi|108779084|gb|ABG13142.1| flagellar basal-body rod protein FlgC [Yersinia pestis Antiqua]
 gi|115347531|emb|CAL20440.1| flagellar basal-body rod protein FlgC [Yersinia pestis CO92]
 gi|145210308|gb|ABP39715.1| flagellar basal-body rod protein FlgC [Yersinia pestis Pestoides F]
 gi|149292666|gb|EDM42740.1| flagellar basal-body rod protein FlgC [Yersinia pestis CA88-4125]
 gi|152958527|gb|ABS45988.1| flagellar basal-body rod protein FlgC [Yersinia pseudotuberculosis
           IP 31758]
 gi|162353322|gb|ABX87270.1| flagellar basal-body rod protein FlgC [Yersinia pestis Angola]
 gi|165913406|gb|EDR32028.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|165922250|gb|EDR39427.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165990201|gb|EDR42502.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166208224|gb|EDR52704.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|166961935|gb|EDR57956.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167049536|gb|EDR60944.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167055157|gb|EDR64954.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|169751183|gb|ACA68701.1| flagellar basal-body rod protein FlgC [Yersinia pseudotuberculosis
           YPIII]
 gi|186698138|gb|ACC88767.1| flagellar basal-body rod protein FlgC [Yersinia pseudotuberculosis
           PB1/+]
 gi|229680314|gb|EEO76413.1| flagellar basal-body rod protein FlgC [Yersinia pestis Nepal516]
 gi|229688942|gb|EEO81007.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229693512|gb|EEO83561.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229701163|gb|EEO89192.1| flagellar basal-body rod protein FlgC [Yersinia pestis Pestoides A]
 gi|262361782|gb|ACY58503.1| flagellar basal body rod protein [Yersinia pestis D106004]
 gi|262366082|gb|ACY62639.1| flagellar basal body rod protein [Yersinia pestis D182038]
 gi|270335151|gb|EFA45928.1| flagellar basal-body rod protein FlgC [Yersinia pestis KIM D27]
 gi|294354491|gb|ADE64832.1| flagellar basal body rod protein [Yersinia pestis Z176003]
 gi|320015469|gb|ADV99040.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Medievalis str. Harbin 35]
          Length = 134

 Score =  119 bits (299), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 42/134 (31%), Positives = 67/134 (50%), Gaps = 2/134 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM--HGSG 59
             L+    IA S L+ QS RM + + N+ANA +     G     ++ +          +G
Sbjct: 1   MSLLNIFDIAGSALSAQSQRMNVSASNLANADSVTGPDGQPYRAKQVVFQVAAQPGQETG 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GVRV +I  D S     + PG+P+A+A G V+ PNV+V  E  +    +R Y AN++ + 
Sbjct: 61  GVRVAQIVDDPSPDRLVYQPGNPLADAKGYVRMPNVDVTGEMVNTISASRSYQANVEVLN 120

Query: 120 QSHDMMTTTLDLLR 133
            +  +M  TL L +
Sbjct: 121 TTKSLMLKTLTLGQ 134


>gi|116250480|ref|YP_766318.1| flagellar basal body rod protein FlgC [Rhizobium leguminosarum bv.
           viciae 3841]
 gi|115255128|emb|CAK06202.1| putative flagellar basal-body rod protein flgc (putative proximal
           rod protein) [Rhizobium leguminosarum bv. viciae 3841]
          Length = 138

 Score =  119 bits (299), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 84/137 (61%), Positives = 105/137 (76%), Gaps = 3/137 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD L A+  IA SGL  QS R++I+SENIANAR+TGDTPG+DPYRRKTI+F + M  S G
Sbjct: 1   MDPLSAAMKIAGSGLEAQSTRLRIVSENIANARSTGDTPGADPYRRKTITFGQQMDRSNG 60

Query: 61  ---VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
              V VKK+GVD+  F  EFDP +P A+  G+VK PNVN+LVE ADMRE NR Y ANLQT
Sbjct: 61  VETVGVKKVGVDEGDFSTEFDPSNPAADQKGVVKLPNVNILVEMADMREANRSYDANLQT 120

Query: 118 IKQSHDMMTTTLDLLRD 134
           IKQ+ D++++T+DLL+ 
Sbjct: 121 IKQTRDLISSTIDLLKS 137


>gi|317052365|ref|YP_004113481.1| flagellar basal-body rod protein FlgC [Desulfurispirillum indicum
           S5]
 gi|316947449|gb|ADU66925.1| flagellar basal-body rod protein FlgC [Desulfurispirillum indicum
           S5]
          Length = 151

 Score =  119 bits (299), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 47/150 (31%), Positives = 66/150 (44%), Gaps = 18/150 (12%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--- 58
                   I++S L  Q  RM +IS N+ANA TT    G+   R+  +   + +H     
Sbjct: 1   MSFFDGLKISSSALFAQRQRMNVISSNLANAHTTRAEDGTYYKRKDLVFKPQTIHDDVRG 60

Query: 59  ---------------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETAD 103
                           GVRV+ I  D    + ++DP HP A+  G V YPN+NV+ E  D
Sbjct: 61  KIFPASFEEAWKKKIEGVRVEAIIEDDEPPILKYDPSHPDADEEGYVAYPNINVVEEMTD 120

Query: 104 MRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           M   +R Y AN+  I+    M    L L R
Sbjct: 121 MITASRSYEANITMIETIKKMANEALGLGR 150


>gi|269138580|ref|YP_003295280.1| flagellar basal body rod protein [Edwardsiella tarda EIB202]
 gi|267984240|gb|ACY84069.1| flagellar basal body rod protein [Edwardsiella tarda EIB202]
 gi|304558590|gb|ADM41254.1| Flagellar basal-body rod protein FlgC [Edwardsiella tarda FL6-60]
          Length = 134

 Score =  119 bits (299), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 38/134 (28%), Positives = 67/134 (50%), Gaps = 2/134 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF--EEVMHGSG 59
             L++   I+ S L  QS RM + + N+ANA +     G     ++ +           G
Sbjct: 1   MSLLSIFDISGSALTAQSKRMNVAASNLANADSVTGPDGEPYRAKQVVFQVKPGAGEEIG 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GV+V ++  D +     + PG+P+A+A G V+ PNV+V+ E  +    +R Y AN++ + 
Sbjct: 61  GVQVSQVVDDPAPDRLVYQPGNPLADAKGYVRMPNVDVVGEMVNSIAASRSYQANVEVLN 120

Query: 120 QSHDMMTTTLDLLR 133
            +  +M  TL L +
Sbjct: 121 TTKSLMMKTLTLGQ 134


>gi|222530141|ref|YP_002574023.1| flagellar basal-body rod protein FlgC [Caldicellulosiruptor bescii
           DSM 6725]
 gi|222456988|gb|ACM61250.1| flagellar basal-body rod protein FlgC [Caldicellulosiruptor bescii
           DSM 6725]
          Length = 145

 Score =  119 bits (299), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 48/145 (33%), Positives = 77/145 (53%), Gaps = 15/145 (10%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
           +  + +I++S L+ Q  RM +I++NIANA TT    G    R+  +  E  +  +     
Sbjct: 1   MFDAINISSSALSAQRVRMDVIAQNIANANTTRTENGQPYRRKVVVFEERKLSFANILSQ 60

Query: 59  ----------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                     GGVRVK I  D S F + +DP HP A+ +G V YPNV+++ E  +M E +
Sbjct: 61  KIGEGTTSFYGGVRVKAILEDPSPFKKVYDPTHPDADQNGYVNYPNVDIVTEMVNMIEAS 120

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R Y AN+  +  +  M+T T ++ +
Sbjct: 121 RSYEANVTALNITKSMITRTFEIGK 145


>gi|183598615|ref|ZP_02960108.1| hypothetical protein PROSTU_02015 [Providencia stuartii ATCC 25827]
 gi|188020794|gb|EDU58834.1| hypothetical protein PROSTU_02015 [Providencia stuartii ATCC 25827]
          Length = 134

 Score =  119 bits (299), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 38/134 (28%), Positives = 69/134 (51%), Gaps = 2/134 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM--HGSG 59
             L++   I+ S L  QS R+ + + N+ANA +     G     ++ +        +G G
Sbjct: 1   MALLSIFDISASALTAQSQRLNVSASNMANAESVVGPDGEPFRAKQVVFQMTPQGRNGVG 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GVRV ++  D +    E+ PGHP+A+  G V+ PNV+++ E  +    +R Y ANL+ + 
Sbjct: 61  GVRVSQLIEDPTPPRMEYKPGHPLADEKGYVRMPNVDMVGEMINTISASRSYQANLEVMN 120

Query: 120 QSHDMMTTTLDLLR 133
            +  ++  TL + +
Sbjct: 121 TAKTLLQKTLTIGQ 134


>gi|311105933|ref|YP_003978786.1| flagellar basal-body rod protein FlgC [Achromobacter xylosoxidans
           A8]
 gi|310760622|gb|ADP16071.1| flagellar basal-body rod protein FlgC [Achromobacter xylosoxidans
           A8]
          Length = 139

 Score =  119 bits (298), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 44/139 (31%), Positives = 71/139 (51%), Gaps = 6/139 (4%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRK------TISFEEVM 55
             L++   IA S L+ QS RM + + N+ANA +     G     R+        + + + 
Sbjct: 1   MSLLSIFDIAGSALSAQSQRMNVAASNMANADSVVGPDGKPYRARQVVFQVNPPAGQALG 60

Query: 56  HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
              GGVRV  +  DQS   + +DP HP+A+A G V  PNV+ + ET +M   +R Y AN+
Sbjct: 61  QEIGGVRVAGVIEDQSPLKQVYDPQHPLADAQGYVSMPNVDPVAETVNMIAASRSYQANV 120

Query: 116 QTIKQSHDMMTTTLDLLRD 134
           + +  +  +M  TL + + 
Sbjct: 121 EVLNTAKALMQKTLTIGQS 139


>gi|225850273|ref|YP_002730507.1| flagellar basal-body rod protein FlgC [Persephonella marina EX-H1]
 gi|225645322|gb|ACO03508.1| flagellar basal-body rod protein FlgC [Persephonella marina EX-H1]
          Length = 136

 Score =  119 bits (298), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 48/135 (35%), Positives = 68/135 (50%), Gaps = 6/135 (4%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +     ++ +G+A Q  R+ I S N+AN  +T    G  PYRRK   F+ V+       V
Sbjct: 2   IFKGLEVSVTGMAAQRIRIDITSSNLANVNSTRTEDGQ-PYRRKVPVFQAVLDNQTKTPV 60

Query: 64  -----KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
                 ++  D S F  +FDP HP A+ +G V YPNV+ L E  DM    R Y ANL   
Sbjct: 61  YKVKIPEVIEDPSPFKLKFDPSHPDADQNGYVAYPNVDPLREMVDMMSAIRTYEANLTAF 120

Query: 119 KQSHDMMTTTLDLLR 133
               DM+  +L+L+R
Sbjct: 121 NTHKDMLLKSLELIR 135


>gi|327193034|gb|EGE59946.1| flagellar basal-body rod protein [Rhizobium etli CNPAF512]
          Length = 138

 Score =  119 bits (298), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 85/137 (62%), Positives = 105/137 (76%), Gaps = 3/137 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD L A+  IA SGL  QS R++I+SENIANAR+TGDTPG+DPYRRKTI+F + M    G
Sbjct: 1   MDPLSAAMKIAGSGLEAQSTRLRIVSENIANARSTGDTPGADPYRRKTITFGQQMDHVSG 60

Query: 61  ---VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
              V VKK+GVD+  F  EFDP +P A+A G+VK PNVNVLVE ADMRE NR Y ANLQT
Sbjct: 61  VETVNVKKVGVDEGDFSTEFDPSNPAADAKGVVKLPNVNVLVEMADMREANRSYDANLQT 120

Query: 118 IKQSHDMMTTTLDLLRD 134
           IKQ+ D++++T+DLL+ 
Sbjct: 121 IKQTRDLISSTIDLLKS 137


>gi|209547926|ref|YP_002279843.1| flagellar basal body rod protein FlgC [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209533682|gb|ACI53617.1| flagellar basal-body rod protein FlgC [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 138

 Score =  119 bits (298), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 83/137 (60%), Positives = 105/137 (76%), Gaps = 3/137 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD L A+  IA SGL  QS R++I+SENIANAR+TGDTPG+DPYRRKTI+F + M  + G
Sbjct: 1   MDPLSAAMKIAGSGLEAQSTRLRIVSENIANARSTGDTPGADPYRRKTITFGQQMDRASG 60

Query: 61  VR---VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           V    VKK+GVD+  F  EFDP +P A+  G+VK PNVN+LVE ADMRE NR Y ANLQT
Sbjct: 61  VETVDVKKVGVDEGDFSTEFDPSNPAADQKGVVKLPNVNILVEMADMREANRSYDANLQT 120

Query: 118 IKQSHDMMTTTLDLLRD 134
           IKQ+ D++++T+DLL+ 
Sbjct: 121 IKQTRDLISSTIDLLKS 137


>gi|268589984|ref|ZP_06124205.1| flagellar basal-body rod protein FlgC [Providencia rettgeri DSM
           1131]
 gi|291314702|gb|EFE55155.1| flagellar basal-body rod protein FlgC [Providencia rettgeri DSM
           1131]
          Length = 134

 Score =  119 bits (298), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 38/134 (28%), Positives = 67/134 (50%), Gaps = 2/134 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM--HGSG 59
             L++   I+ S L  QS R+ + + N+ANA +     G     ++ +        H  G
Sbjct: 1   MALLSIFDISASALTAQSQRLNVSASNMANAESIAGPDGQPYRAKQVVFQMAPQGRHEVG 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GVRV ++  D +    E+ PGHP A+  G V+ PNV+++ E  +    +R Y ANL+ + 
Sbjct: 61  GVRVSELIEDPTPPRMEYKPGHPSADEKGYVQMPNVDMVGEMINTISASRSYQANLEVMN 120

Query: 120 QSHDMMTTTLDLLR 133
            +  ++  TL + +
Sbjct: 121 TAKTLLQKTLTIGQ 134


>gi|332799171|ref|YP_004460670.1| flagellar basal-body rod protein FlgC [Tepidanaerobacter sp. Re1]
 gi|332696906|gb|AEE91363.1| flagellar basal-body rod protein FlgC [Tepidanaerobacter sp. Re1]
          Length = 143

 Score =  119 bits (298), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 49/142 (34%), Positives = 63/142 (44%), Gaps = 10/142 (7%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKT----------ISF 51
                S  I+ SGL  Q  R+  IS NIANA TT    G    R +            S 
Sbjct: 1   MGFFNSLDISASGLTAQRLRLDTISNNIANANTTRTEEGGPFQRERVVFQERNTTGSFSN 60

Query: 52  EEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
                   GVRV  I  D + F   +DP HP A+ SG V  PNVN++ E  DM    R Y
Sbjct: 61  YLDQQKPAGVRVVAIEKDTAPFKALYDPTHPDADPSGYVMLPNVNIVTEMVDMISATRSY 120

Query: 112 MANLQTIKQSHDMMTTTLDLLR 133
            AN+  I  +  MM+  L++ +
Sbjct: 121 EANVTAINSAKSMMSKALEISK 142


>gi|310659047|ref|YP_003936768.1| flagellar component of cell-proximal portion of basal-body rod
           [Clostridium sticklandii DSM 519]
 gi|308825825|emb|CBH21863.1| flagellar component of cell-proximal portion of basal-body rod
           [Clostridium sticklandii]
          Length = 146

 Score =  119 bits (298), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 47/147 (31%), Positives = 73/147 (49%), Gaps = 16/147 (10%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM------ 55
             + +S +I+ S L  +  RM +IS+N+ANA TT    G DPYRR+ + F+E        
Sbjct: 1   MSIFSSINISASALTAERTRMDVISKNLANANTTRTQSG-DPYRRQVVVFKEADEKQSFK 59

Query: 56  ---------HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
                     G  GV +  I  D++ F + ++PGHP A+  G V   NV+ + E  DM  
Sbjct: 60  SIFESKKSKDGDKGVEIVGIVEDKTPFRQVYNPGHPDADEKGYVTMSNVDTITEMVDMIS 119

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
             R Y AN+  +  S  M+   L++ +
Sbjct: 120 ATRSYEANVTALNTSKSMLLKALEIGK 146


>gi|119953092|ref|YP_945301.1| flagellar basal body rod protein FlgC [Borrelia turicatae 91E135]
 gi|119861863|gb|AAX17631.1| flagellar basal-body rod protein FlgC [Borrelia turicatae 91E135]
          Length = 152

 Score =  119 bits (297), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 48/152 (31%), Positives = 71/152 (46%), Gaps = 19/152 (12%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSD--------------PYRRK 47
             L +S + A +GL  Q  R+ +I+ NIAN  TT  + G                PY + 
Sbjct: 1   MGLFSSINTAATGLTAQRLRLDVIANNIANVETTRTSEGGSYRRQRIVFSPRVVSPYWKG 60

Query: 48  TISFEEVMHGSG-GVRVKKIGVDQSTFVEEFDPGHPVA----NASGIVKYPNVNVLVETA 102
               + + +G G GVRV  I  D+S    ++DP HP A       G V++PNVN + E  
Sbjct: 61  PFVPDYLDNGIGQGVRVAGIERDKSPLKLKYDPTHPDAIKSGERKGYVEFPNVNAVEEMV 120

Query: 103 DMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
           DM   +R Y AN   I  S  +  + L +L++
Sbjct: 121 DMISASRAYEANSTVINSSKAIFRSALSILQN 152


>gi|227112519|ref|ZP_03826175.1| flagellar basal body rod protein FlgC [Pectobacterium carotovorum
           subsp. brasiliensis PBR1692]
 gi|227328336|ref|ZP_03832360.1| flagellar basal body rod protein FlgC [Pectobacterium carotovorum
           subsp. carotovorum WPP14]
          Length = 134

 Score =  119 bits (297), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 37/134 (27%), Positives = 66/134 (49%), Gaps = 2/134 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM--HGSG 59
             L+    I+ S L+ QS R+ + + N+ANA +     G     ++ +          +G
Sbjct: 1   MSLLNIFEISGSALSAQSQRLNVSASNLANADSVTGPDGEPYRAKQVVFEVNAAPGQSTG 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GVRV  +  D S     ++PG+P+A+  G V+ PNV+ + E  +    +R Y AN++ + 
Sbjct: 61  GVRVSNVIEDPSPARLVYEPGNPLADGQGYVRMPNVDPVAEMVNTISASRSYQANVEVLN 120

Query: 120 QSHDMMTTTLDLLR 133
            +  MM  TL + +
Sbjct: 121 TTKSMMLKTLTIGQ 134


>gi|33592477|ref|NP_880121.1| flagellar basal body rod protein FlgC [Bordetella pertussis Tohama
           I]
 gi|33572123|emb|CAE41665.1| flagellar basal-body rod protein FlgC [Bordetella pertussis Tohama
           I]
 gi|332381894|gb|AEE66741.1| flagellar basal body rod protein FlgC [Bordetella pertussis CS]
          Length = 139

 Score =  119 bits (297), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 45/139 (32%), Positives = 71/139 (51%), Gaps = 6/139 (4%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRK------TISFEEVM 55
             L++   IA S L+ QS RM + + N+ANA +     G     R+        + +   
Sbjct: 1   MSLLSIFEIAGSALSAQSQRMNVSASNMANADSVAGPDGQPYRARQVVFQVNPPAGQAFG 60

Query: 56  HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
              GGVRV  +  DQS F + +DP HP+A+A G V  PNV+ + ET +M   +R Y AN+
Sbjct: 61  QEIGGVRVAGVVEDQSPFKKIYDPKHPMADAQGYVNMPNVDPVAETVNMIAASRSYQANV 120

Query: 116 QTIKQSHDMMTTTLDLLRD 134
           + +  +  +M  TL + + 
Sbjct: 121 EVLNTAKQLMLKTLTIGQS 139


>gi|293395581|ref|ZP_06639864.1| flagellar basal-body rod protein FlgC [Serratia odorifera DSM 4582]
 gi|291421900|gb|EFE95146.1| flagellar basal-body rod protein FlgC [Serratia odorifera DSM 4582]
          Length = 134

 Score =  119 bits (297), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 41/134 (30%), Positives = 67/134 (50%), Gaps = 2/134 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM--HGSG 59
             L+    I+ S L+ QS R+ + + N+ANA +     G     ++ +          +G
Sbjct: 1   MSLLNIFDISGSALSAQSQRLNVSASNMANADSVSGPDGQPYRAKQVVFEVAAAPGQPTG 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GVRV  I  D +     F PG+P+A+A G V+ PNV+V+ E  +    +R Y AN++ + 
Sbjct: 61  GVRVASIVDDPAPERLVFQPGNPLADAKGYVRMPNVDVVGEMVNTISASRSYQANVEVLN 120

Query: 120 QSHDMMTTTLDLLR 133
            +  MM  TL L +
Sbjct: 121 TTKSMMMKTLTLGQ 134


>gi|307945654|ref|ZP_07660990.1| flagellar basal-body rod protein FlgC [Roseibium sp. TrichSKD4]
 gi|307771527|gb|EFO30752.1| flagellar basal-body rod protein FlgC [Roseibium sp. TrichSKD4]
          Length = 136

 Score =  119 bits (297), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 62/135 (45%), Positives = 81/135 (60%), Gaps = 3/135 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             LI S  +A SGL  Q+ RM++I+ENIANA +T  TP  +PYRR+  +F+         
Sbjct: 1   MDLIKSLFVAASGLKAQNGRMRVIAENIANANSTAKTPDGEPYRRRVPTFQSHFSKELNA 60

Query: 62  RVK---KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
            V    K+  D+S F E + PGHP AN  G V  PNVN L+ETADMRE  R Y ANL  I
Sbjct: 61  EVVELGKVAEDKSAFKERYQPGHPAANEQGYVLEPNVNTLIETADMREAQRSYEANLNVI 120

Query: 119 KQSHDMMTTTLDLLR 133
           + S  M+  T+D+L+
Sbjct: 121 QSSRRMLQRTIDILK 135


>gi|125972984|ref|YP_001036894.1| flagellar basal-body rod protein FlgC [Clostridium thermocellum
           ATCC 27405]
 gi|256004781|ref|ZP_05429756.1| flagellar basal-body rod protein FlgC [Clostridium thermocellum DSM
           2360]
 gi|281417195|ref|ZP_06248215.1| flagellar basal-body rod protein FlgC [Clostridium thermocellum
           JW20]
 gi|125713209|gb|ABN51701.1| flagellar basal-body rod protein FlgC [Clostridium thermocellum
           ATCC 27405]
 gi|255991231|gb|EEU01338.1| flagellar basal-body rod protein FlgC [Clostridium thermocellum DSM
           2360]
 gi|281408597|gb|EFB38855.1| flagellar basal-body rod protein FlgC [Clostridium thermocellum
           JW20]
 gi|316940780|gb|ADU74814.1| flagellar basal-body rod protein FlgC [Clostridium thermocellum DSM
           1313]
          Length = 147

 Score =  119 bits (297), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 50/147 (34%), Positives = 66/147 (44%), Gaps = 15/147 (10%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--- 58
                S  I+ S L  Q  RM  IS+NIANA TT    G    R+  +  E+   GS   
Sbjct: 1   MGYFTSLDISASALTAQRLRMDTISQNIANANTTRTENGQPYRRKTVLFEEKSSTGSFSE 60

Query: 59  ------------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
                        GVRV  I  D+S F   +DPGHP A+  G V  PNV+V+ E  +M  
Sbjct: 61  YLENSIRGKTAGAGVRVTGIVEDRSPFKRVYDPGHPDADEEGYVLMPNVDVITEMVNMIS 120

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
             R Y AN+  I  +  +    L++ R
Sbjct: 121 ATRAYEANITAINTTKGLAMKALEIGR 147


>gi|111115118|ref|YP_709736.1| flagellar basal body rod protein FlgC [Borrelia afzelii PKo]
 gi|110890392|gb|ABH01560.1| flagellar basal-body rod protein [Borrelia afzelii PKo]
          Length = 152

 Score =  119 bits (297), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 47/152 (30%), Positives = 70/152 (46%), Gaps = 19/152 (12%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG---- 57
             L +S ++A++GL  Q  R+ +IS NIAN  T+    G    R++ I    V +     
Sbjct: 1   MGLFSSINVASTGLTAQRLRIDVISNNIANVSTSRTPDGGPYRRQRIIFAPRVNNPYWKG 60

Query: 58  -----------SGGVRVKKIGVDQSTFVEEFDPGHPVA----NASGIVKYPNVNVLVETA 102
                        GVRV  I  D+S    ++DP HP +    +  G V+ PNVN++ E  
Sbjct: 61  PFVPDYLDNGIGQGVRVASIEKDKSPLKLKYDPTHPDSISSGDKKGYVELPNVNLVEEMV 120

Query: 103 DMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
           DM   +R Y AN   I  S  M  + L +L+ 
Sbjct: 121 DMISASRAYEANSTVINSSKSMFRSALAILQS 152


>gi|291059787|gb|ADD72522.1| flagellar basal-body rod protein FlgC [Treponema pallidum subsp.
           pallidum str. Chicago]
          Length = 152

 Score =  119 bits (297), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 19/152 (12%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH---- 56
           M  L +  +IA +G++ Q  R  +IS+NIANA +T    G    R + +  ++       
Sbjct: 1   MMGLFSGINIAATGMSAQRLRADVISDNIANASSTRTQEGGVFRRSRVVLAQKNPGIDWR 60

Query: 57  -----------GSGGVRVKKIGVDQSTFVEEFDPGHPVA----NASGIVKYPNVNVLVET 101
                         GVRV  I  D +     +DP HP A      +G V+YPNV+++ E 
Sbjct: 61  IPFVPEQLDRGVGTGVRVVSIEKDNAPSRLVYDPTHPDAILSGPKAGYVEYPNVDIVTEM 120

Query: 102 ADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            D+   +R Y AN+  I  S +M    L++ R
Sbjct: 121 VDLISASRAYEANISVISGSKEMFQRALEIAR 152


>gi|216264021|ref|ZP_03436015.1| flagellar basal-body rod protein FlgC [Borrelia afzelii ACA-1]
 gi|215980065|gb|EEC20887.1| flagellar basal-body rod protein FlgC [Borrelia afzelii ACA-1]
          Length = 152

 Score =  119 bits (297), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 47/152 (30%), Positives = 70/152 (46%), Gaps = 19/152 (12%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG---- 57
             L +S ++A++GL  Q  R+ +IS NIAN  T+    G    R++ I    V +     
Sbjct: 1   MGLFSSINVASTGLTAQRLRIDVISNNIANVSTSRTPDGGPYRRQRIIFAPRVNNPYWKG 60

Query: 58  -----------SGGVRVKKIGVDQSTFVEEFDPGHPVA----NASGIVKYPNVNVLVETA 102
                        GVRV  I  D+S    ++DP HP +    +  G V+ PNVN++ E  
Sbjct: 61  PFIPDYLDNGIGQGVRVASIEKDKSPLKLKYDPTHPDSISSGDKKGYVELPNVNLVEEMV 120

Query: 103 DMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
           DM   +R Y AN   I  S  M  + L +L+ 
Sbjct: 121 DMISASRAYEANSTVINSSKSMFRSALAILQS 152


>gi|242238967|ref|YP_002987148.1| flagellar basal-body rod protein FlgC [Dickeya dadantii Ech703]
 gi|242131024|gb|ACS85326.1| flagellar basal-body rod protein FlgC [Dickeya dadantii Ech703]
          Length = 134

 Score =  119 bits (297), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 39/134 (29%), Positives = 63/134 (47%), Gaps = 2/134 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM--HGSG 59
             L +   I+ S L  QS RM + + N+ANA +     G     ++ +           G
Sbjct: 1   MSLTSIFEISGSALTAQSQRMNVSASNLANADSVTGPDGQPYRAKQVVFKLAATEGQEIG 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GVRV  +  D S     + PG+P+A+  G V+ PNV+V  E  +    +R Y AN++ + 
Sbjct: 61  GVRVDDVVEDPSPDKLVYQPGNPLADQRGYVRMPNVDVAAEMVNSISASRSYQANVEVLN 120

Query: 120 QSHDMMTTTLDLLR 133
            +  +M  TL L +
Sbjct: 121 TAKTLMQKTLTLGQ 134


>gi|253688974|ref|YP_003018164.1| flagellar basal-body rod protein FlgC [Pectobacterium carotovorum
           subsp. carotovorum PC1]
 gi|251755552|gb|ACT13628.1| flagellar basal-body rod protein FlgC [Pectobacterium carotovorum
           subsp. carotovorum PC1]
          Length = 134

 Score =  119 bits (297), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 37/134 (27%), Positives = 66/134 (49%), Gaps = 2/134 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM--HGSG 59
             L+    I+ S L+ QS R+ + + N+ANA +     G     ++ +          +G
Sbjct: 1   MSLLNIFEISGSALSAQSQRLNVSASNLANADSVTGPDGEPYRAKQVVFEVNAAPGQSTG 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GVRV  +  D S     ++PG+P+A+  G V+ PNV+ + E  +    +R Y AN++ + 
Sbjct: 61  GVRVANVIEDPSPARLVYEPGNPLADGQGYVRMPNVDPVAEMVNTISASRSYQANVEVLN 120

Query: 120 QSHDMMTTTLDLLR 133
            +  MM  TL + +
Sbjct: 121 TTKSMMLKTLTIGQ 134


>gi|238785499|ref|ZP_04629482.1| Flagellar basal-body rod protein flgC [Yersinia bercovieri ATCC
           43970]
 gi|238799105|ref|ZP_04642561.1| Flagellar basal-body rod protein flgC [Yersinia mollaretii ATCC
           43969]
 gi|238713601|gb|EEQ05630.1| Flagellar basal-body rod protein flgC [Yersinia bercovieri ATCC
           43970]
 gi|238717052|gb|EEQ08912.1| Flagellar basal-body rod protein flgC [Yersinia mollaretii ATCC
           43969]
          Length = 134

 Score =  119 bits (297), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 40/134 (29%), Positives = 67/134 (50%), Gaps = 2/134 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM--HGSG 59
             L+    IA S L+ QS R+ + + N+ANA +     G     ++ +          +G
Sbjct: 1   MSLLNIFDIAGSALSAQSQRLNVSASNMANADSVTGPDGQPYRAKQVVFQVAAQPGQETG 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GVRV ++  D +     F PG+P+A+A G V+ PNV+V  E  +    +R Y AN++ + 
Sbjct: 61  GVRVSQVVDDPAPDRLVFQPGNPLADAKGYVRMPNVDVTGEMVNTISASRSYQANVEVLN 120

Query: 120 QSHDMMTTTLDLLR 133
            +  +M  TL L +
Sbjct: 121 TTKSLMLKTLTLGQ 134


>gi|315121849|ref|YP_004062338.1| flagellar basal body rod protein FlgC [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313495251|gb|ADR51850.1| flagellar basal body rod protein FlgC [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 134

 Score =  119 bits (297), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 114/134 (85%), Positives = 122/134 (91%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MDYL+AS+ IANSGL VQS+RM +ISENIANARTTG+T GSDPYRRKTISFEEVMH  GG
Sbjct: 1   MDYLVASSQIANSGLTVQSSRMHVISENIANARTTGNTAGSDPYRRKTISFEEVMHEGGG 60

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           VRVKK+ VD+S FVEEFDP HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ IKQ
Sbjct: 61  VRVKKVSVDKSPFVEEFDPSHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQIIKQ 120

Query: 121 SHDMMTTTLDLLRD 134
           S DM+ TTLDLLRD
Sbjct: 121 SRDMIATTLDLLRD 134


>gi|157371209|ref|YP_001479198.1| flagellar basal body rod protein FlgC [Serratia proteamaculans 568]
 gi|157322973|gb|ABV42070.1| flagellar basal-body rod protein FlgC [Serratia proteamaculans 568]
          Length = 134

 Score =  118 bits (296), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 38/134 (28%), Positives = 67/134 (50%), Gaps = 2/134 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM--HGSG 59
             L+    I+ S L+ QS R+ + + N+ANA +     G     ++ +          +G
Sbjct: 1   MSLLNIFDISGSALSAQSQRLNVSASNMANADSVSGPDGQPYRAKQVVFEVASAAGQPTG 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GVRV ++  D +     + PG+P+A+  G V+ PNV+V+ E  +    +R Y AN++ + 
Sbjct: 61  GVRVAQVVDDPAPERLVYQPGNPLADGKGYVRMPNVDVVGEMVNTISASRSYQANVEVLN 120

Query: 120 QSHDMMTTTLDLLR 133
            +  MM  TL L +
Sbjct: 121 TTKSMMMKTLTLGQ 134


>gi|224534284|ref|ZP_03674862.1| flagellar basal-body rod protein FlgC [Borrelia spielmanii A14S]
 gi|224514386|gb|EEF84702.1| flagellar basal-body rod protein FlgC [Borrelia spielmanii A14S]
          Length = 152

 Score =  118 bits (296), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 51/153 (33%), Positives = 73/153 (47%), Gaps = 21/153 (13%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--- 58
             L +S ++A++GL  Q  R+ +IS NIAN  T   TP   PYRR+ I F   ++     
Sbjct: 1   MGLFSSINVASTGLTAQRLRIDVISNNIANVST-SRTPDGGPYRRQRIIFAPRINNPYWK 59

Query: 59  -------------GGVRVKKIGVDQSTFVEEFDPGHPVA----NASGIVKYPNVNVLVET 101
                         GVRV  I  D+S    ++DP HP +    +  G V+ PNVN++ E 
Sbjct: 60  GPFIPDYLDNGIGQGVRVASIEKDKSPLKLKYDPTHPDSISSGDKKGYVELPNVNLVEEM 119

Query: 102 ADMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
            DM   +R Y AN   I  S  M  + L +L+ 
Sbjct: 120 VDMISASRAYEANSTVINSSKSMFRSALAILQS 152


>gi|209964219|ref|YP_002297134.1| flagellar basal-body rod protein FlgC [Rhodospirillum centenum SW]
 gi|209957685|gb|ACI98321.1| flagellar basal-body rod protein FlgC [Rhodospirillum centenum SW]
          Length = 136

 Score =  118 bits (296), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 64/136 (47%), Positives = 88/136 (64%), Gaps = 3/136 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             L+ +  ++ +GL VQ  R+++I+EN+ANA +T  TPG  PYRRK + F+ V++   G+
Sbjct: 1   MDLMNTLSLSAAGLKVQGTRLRVIAENLANANSTAPTPGDLPYRRKVVLFQNVLNRELGM 60

Query: 62  R---VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
               VKKI VD+S F   +DPGHP A+A G V  PNVN LVE+ DMRE  R Y ANL  I
Sbjct: 61  PTVKVKKIDVDRSDFQRRYDPGHPSADAEGYVLTPNVNSLVESMDMREAQRSYEANLNVI 120

Query: 119 KQSHDMMTTTLDLLRD 134
             +  M+T T++LLR 
Sbjct: 121 DTTRQMLTRTIELLRS 136


>gi|50120637|ref|YP_049804.1| flagellar basal body rod protein FlgC [Pectobacterium atrosepticum
           SCRI1043]
 gi|49611163|emb|CAG74609.1| flagellar basal-body rod protein [Pectobacterium atrosepticum
           SCRI1043]
          Length = 134

 Score =  118 bits (296), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 37/134 (27%), Positives = 66/134 (49%), Gaps = 2/134 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM--HGSG 59
             L+    I+ S L+ QS R+ + + N+ANA +     G     ++ +          +G
Sbjct: 1   MSLLNIFEISGSALSAQSQRLNVSASNLANADSVTGPDGQPYRAKQVVFEVNAAPGQSTG 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GVRV  +  D S     ++PG+P+A+  G V+ PNV+ + E  +    +R Y AN++ + 
Sbjct: 61  GVRVANVIEDPSPARLVYEPGNPLADGQGYVRMPNVDPVAEMVNTISASRSYQANVEVLN 120

Query: 120 QSHDMMTTTLDLLR 133
            +  MM  TL + +
Sbjct: 121 TTKSMMLKTLTIGQ 134


>gi|293605001|ref|ZP_06687397.1| flagellar basal-body rod protein FlgC [Achromobacter piechaudii
           ATCC 43553]
 gi|292816606|gb|EFF75691.1| flagellar basal-body rod protein FlgC [Achromobacter piechaudii
           ATCC 43553]
          Length = 139

 Score =  118 bits (296), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 42/139 (30%), Positives = 70/139 (50%), Gaps = 6/139 (4%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRK------TISFEEVM 55
             L++   IA S L+ QS RM + + N+ANA +     G     R+        + + + 
Sbjct: 1   MSLLSIFDIAGSALSAQSQRMNVTASNLANADSVVGPDGQPYRARQVVFQVNPAAGQAMG 60

Query: 56  HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
              GGVRV  +  D S   + +DP HP+A+A G +  PNV+ + ET +M   +R Y AN+
Sbjct: 61  QEIGGVRVAGVIQDPSPLKQIYDPKHPLADAQGYISMPNVDPVAETVNMIAASRSYQANV 120

Query: 116 QTIKQSHDMMTTTLDLLRD 134
           + +  +  +M  TL + + 
Sbjct: 121 EVLNTAKSLMQKTLTIGQS 139


>gi|218672513|ref|ZP_03522182.1| flagellar basal body rod protein FlgC [Rhizobium etli GR56]
          Length = 138

 Score =  118 bits (295), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 83/137 (60%), Positives = 105/137 (76%), Gaps = 3/137 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD L A+  IA SGL  QS R++I+SENIANAR+TGDTPG+DPYRRKTI+F + M  + G
Sbjct: 1   MDPLSAAMKIAGSGLEAQSTRLRIVSENIANARSTGDTPGADPYRRKTITFGQQMDRASG 60

Query: 61  ---VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
              V VKK+GVD+  F  EFDP +P A+  G+VK PNVN+LVE ADMRE NR Y ANLQT
Sbjct: 61  VETVNVKKVGVDEGDFSTEFDPSNPAADQKGVVKLPNVNILVEMADMREANRSYDANLQT 120

Query: 118 IKQSHDMMTTTLDLLRD 134
           IKQ+ D++++T+DLL+ 
Sbjct: 121 IKQTRDLISSTIDLLKS 137


>gi|289523576|ref|ZP_06440430.1| flagellar basal-body rod protein FlgC [Anaerobaculum
           hydrogeniformans ATCC BAA-1850]
 gi|289503268|gb|EFD24432.1| flagellar basal-body rod protein FlgC [Anaerobaculum
           hydrogeniformans ATCC BAA-1850]
          Length = 136

 Score =  118 bits (295), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 49/136 (36%), Positives = 66/136 (48%), Gaps = 3/136 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE---EVMHGS 58
             L  S  IA S L      M +IS+N+AN  TT    G    R+  I  E       G+
Sbjct: 1   MRLFDSLEIAGSSLTAHRLWMDLISQNLANVNTTRTQDGGPYRRKVPIFAERLEAAEKGA 60

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
            GVRV+KI  D       + P HP A+  G V YPNVNV+ E  DM    R Y ANL  +
Sbjct: 61  KGVRVEKIEEDDLPPRMVYQPEHPDADEEGYVAYPNVNVVREMTDMMAATRAYEANLMVV 120

Query: 119 KQSHDMMTTTLDLLRD 134
           + + ++  + +D+LR 
Sbjct: 121 ESAKEIWGSAIDVLRS 136


>gi|225181613|ref|ZP_03735054.1| flagellar basal-body rod protein FlgC [Dethiobacter alkaliphilus
           AHT 1]
 gi|225167721|gb|EEG76531.1| flagellar basal-body rod protein FlgC [Dethiobacter alkaliphilus
           AHT 1]
          Length = 136

 Score =  118 bits (295), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 51/136 (37%), Positives = 76/136 (55%), Gaps = 5/136 (3%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--- 58
             +  + ++++SGL  +  R+ +I+ NIANA TT    G  PY+RK+  F EVM G+   
Sbjct: 1   MQIFKAMNVSSSGLTAERFRLDLIANNIANAHTTRTEDG-GPYQRKSAVFAEVMDGARKS 59

Query: 59  -GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
             GVRV+ + VD +     ++P HP AN  G V YPNVN++ E  DM    R Y AN+  
Sbjct: 60  GQGVRVQGVSVDNTEPRLVYEPEHPDANEEGYVAYPNVNIVQEMVDMITATRAYEANVTA 119

Query: 118 IKQSHDMMTTTLDLLR 133
           +  S +M    L++ R
Sbjct: 120 LNASKNMFLKALEIGR 135


>gi|238793996|ref|ZP_04637614.1| Flagellar basal-body rod protein flgC [Yersinia intermedia ATCC
           29909]
 gi|238726628|gb|EEQ18164.1| Flagellar basal-body rod protein flgC [Yersinia intermedia ATCC
           29909]
          Length = 134

 Score =  118 bits (295), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 40/134 (29%), Positives = 67/134 (50%), Gaps = 2/134 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM--HGSG 59
             L+    IA S L+ QS R+ + + N+ANA +     G     ++ +          +G
Sbjct: 1   MSLLNIFDIAGSALSAQSQRLNVSASNMANADSVTGPDGQPYRAKQVVFQVAAQPGQETG 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GVRV +I  D +     + PG+P+A+A G V+ PNV+V  E  +    +R Y AN++ + 
Sbjct: 61  GVRVSQIVDDPAPDRLVYQPGNPLADAKGYVRMPNVDVTGEMINTISASRSYQANVEVLN 120

Query: 120 QSHDMMTTTLDLLR 133
            +  +M  TL L +
Sbjct: 121 TTKSLMLKTLTLGQ 134


>gi|123442786|ref|YP_001006763.1| flagellar basal body rod protein FlgC [Yersinia enterocolitica
           subsp. enterocolitica 8081]
 gi|332161320|ref|YP_004297897.1| flagellar basal body rod protein FlgC [Yersinia enterocolitica
           subsp. palearctica 105.5R(r)]
 gi|2494525|sp|Q56894|FLGC_YEREN RecName: Full=Flagellar basal-body rod protein flgC
 gi|793899|emb|CAA88193.1| flgC [Yersinia enterocolitica]
 gi|122089747|emb|CAL12600.1| flagellar basal-body rod protein FlgC [Yersinia enterocolitica
           subsp. enterocolitica 8081]
 gi|325665550|gb|ADZ42194.1| flagellar basal body rod protein FlgC [Yersinia enterocolitica
           subsp. palearctica 105.5R(r)]
 gi|330860608|emb|CBX70905.1| flagellar basal-body rod protein flgC [Yersinia enterocolitica
           W22703]
          Length = 134

 Score =  118 bits (295), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 41/134 (30%), Positives = 67/134 (50%), Gaps = 2/134 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM--HGSG 59
             L+    IA S L+ QS R+ + + N+ANA +     G     ++ +          +G
Sbjct: 1   MSLLNIFDIAGSALSAQSQRLNVSASNMANADSVTGPDGQPYRAKQVVFQVAAQPGQETG 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GVRV +I  D +     F PG+P+A+A G V+ PNV+V  E  +    +R Y AN++ + 
Sbjct: 61  GVRVAQIIDDPAPDRLVFQPGNPLADAKGYVRMPNVDVTGEMVNTISASRSYQANVEVLN 120

Query: 120 QSHDMMTTTLDLLR 133
            +  +M  TL L +
Sbjct: 121 TTKSLMLKTLTLGQ 134


>gi|51598553|ref|YP_072741.1| flagellar basal body rod protein FlgC [Borrelia garinii PBi]
 gi|51573124|gb|AAU07149.1| flagellar basal-body rod protein [Borrelia garinii PBi]
          Length = 152

 Score =  118 bits (295), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 46/152 (30%), Positives = 70/152 (46%), Gaps = 19/152 (12%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG---- 57
             L +S ++A++GL  Q  R+ +IS NIAN  T+    G    R++ I    V +     
Sbjct: 1   MGLFSSINVASTGLTAQRLRIDVISNNIANVSTSRTPDGGPYRRQRIIFAPRVSNPYWKG 60

Query: 58  -----------SGGVRVKKIGVDQSTFVEEFDPGHPVA----NASGIVKYPNVNVLVETA 102
                        GVRV  I  D+S    ++DP HP +    +  G V+ PNVN++ E  
Sbjct: 61  PFIPNYLDNGIGQGVRVVNIEKDKSPLKLKYDPTHPDSISFGDKKGYVELPNVNLVEEMV 120

Query: 103 DMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
           DM   +R Y AN   +  S  M  + L +L+ 
Sbjct: 121 DMISASRAYEANSTVVNSSKSMFRSALAILQS 152


>gi|302872573|ref|YP_003841209.1| flagellar basal-body rod protein FlgC [Caldicellulosiruptor
           obsidiansis OB47]
 gi|302575432|gb|ADL43223.1| flagellar basal-body rod protein FlgC [Caldicellulosiruptor
           obsidiansis OB47]
          Length = 145

 Score =  118 bits (295), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 48/145 (33%), Positives = 73/145 (50%), Gaps = 15/145 (10%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR---------------KT 48
           +  + +I++S L  Q  RM +I++NIANA TT    G    R+                 
Sbjct: 1   MFDAINISSSALTAQRVRMDVIAQNIANANTTRTESGQPYRRKIVVFEERKQSFADILTQ 60

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
              E      GGVRVK I  D S F + +DP HP A+ +G V YPNV+++ E  +M E +
Sbjct: 61  KIGEAANSYYGGVRVKAILEDPSPFKKVYDPTHPDADQNGYVNYPNVDIVTEMVNMIEAS 120

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R Y AN+  +  +  M+T T ++ +
Sbjct: 121 RSYEANVTALNITKSMITRTFEIGK 145


>gi|312621566|ref|YP_004023179.1| flagellar basal-body rod protein flgc [Caldicellulosiruptor
           kronotskyensis 2002]
 gi|312202033|gb|ADQ45360.1| flagellar basal-body rod protein FlgC [Caldicellulosiruptor
           kronotskyensis 2002]
          Length = 145

 Score =  118 bits (295), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 47/145 (32%), Positives = 75/145 (51%), Gaps = 15/145 (10%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR---------------KT 48
           +  + +I++S L+ Q  RM +I++NIANA TT    G    R+                 
Sbjct: 1   MFDAINISSSALSAQRVRMDVIAQNIANANTTRTENGQPYRRKVVVFEESKQSFADILSQ 60

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
              ++     GGVRVK I  D S F + +DP HP A+ +G V YPNV+++ E  +M E +
Sbjct: 61  KIGKDQTSSYGGVRVKAILEDPSPFKKVYDPTHPDADQNGYVNYPNVDIVTEMVNMIEAS 120

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R Y AN+  +  +  M+T T ++ +
Sbjct: 121 RSYEANVTALNITKSMITRTFEIGK 145


>gi|110632658|ref|YP_672866.1| flagellar basal body rod protein FlgC [Mesorhizobium sp. BNC1]
 gi|110283642|gb|ABG61701.1| flagellar basal-body rod protein FlgC [Chelativorans sp. BNC1]
          Length = 139

 Score =  118 bits (294), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 72/137 (52%), Positives = 92/137 (67%), Gaps = 3/137 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD L  +  IA SGLA QS RM+++SEN+ANA++T + PG DPYRRKTISF   +    G
Sbjct: 1   MDPLSTAVKIAGSGLAAQSERMRVVSENLANAQSTSEVPGGDPYRRKTISFAAELGRGNG 60

Query: 61  ---VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
              V V  I  D + F  E+ PGH  A+  G VK PNVN+LVE ADMRE NR Y ANLQ 
Sbjct: 61  GAMVEVSAIARDPAEFPVEYMPGHEAADEFGYVKMPNVNMLVEMADMREANRGYEANLQV 120

Query: 118 IKQSHDMMTTTLDLLRD 134
           +KQ+ ++++ T+DLLR 
Sbjct: 121 VKQARELISMTIDLLRS 137


>gi|169831913|ref|YP_001717895.1| flagellar basal-body rod protein FlgC [Candidatus Desulforudis
           audaxviator MP104C]
 gi|169638757|gb|ACA60263.1| flagellar basal-body rod protein FlgC [Candidatus Desulforudis
           audaxviator MP104C]
          Length = 139

 Score =  118 bits (294), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 45/138 (32%), Positives = 65/138 (47%), Gaps = 6/138 (4%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-- 59
             L  S  I+ SG+  +  R+ +IS NIANA TT    G    R   +  + +    G  
Sbjct: 1   MSLFKSFGISGSGMTAERLRLDLISNNIANAHTTRTREGGPYRREVPVFAQYLERFRGRG 60

Query: 60  ----GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
               GVRV  +  D S      +P HP A+A+G V+YPNV++  E  D+   +R Y AN 
Sbjct: 61  FAGAGVRVTAVVKDPSPLRAVHEPEHPDADAAGFVQYPNVDLNREFVDLMGASRAYEANA 120

Query: 116 QTIKQSHDMMTTTLDLLR 133
                +  M+   L+L R
Sbjct: 121 AAFDAAKQMVQRALELGR 138


>gi|190890361|ref|YP_001976903.1| flagellar basal-body rod protein [Rhizobium etli CIAT 652]
 gi|190695640|gb|ACE89725.1| flagellar basal-body rod protein [Rhizobium etli CIAT 652]
          Length = 138

 Score =  118 bits (294), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 85/137 (62%), Positives = 106/137 (77%), Gaps = 3/137 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD L A+  IA SGL  QS R++I+SENIANAR+TGDTPG+DPYRRKTI+F + M  + G
Sbjct: 1   MDPLSAAMKIAGSGLEAQSTRLRIVSENIANARSTGDTPGADPYRRKTITFGQQMDRASG 60

Query: 61  ---VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
              V VKK+GVD+  F  EFDP +P A+A G+VK PNVNVLVE ADMRE NR Y ANLQT
Sbjct: 61  VETVNVKKVGVDEGDFSTEFDPSNPAADAKGVVKLPNVNVLVEMADMREANRSYDANLQT 120

Query: 118 IKQSHDMMTTTLDLLRD 134
           IKQ+ D++++T+DLL+ 
Sbjct: 121 IKQTRDLISSTIDLLKS 137


>gi|261821151|ref|YP_003259257.1| flagellar basal body rod protein FlgC [Pectobacterium wasabiae
           WPP163]
 gi|261605164|gb|ACX87650.1| flagellar basal-body rod protein FlgC [Pectobacterium wasabiae
           WPP163]
          Length = 134

 Score =  118 bits (294), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 37/134 (27%), Positives = 66/134 (49%), Gaps = 2/134 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM--HGSG 59
             L+    I+ S L+ QS R+ + + N+ANA +     G     ++ +          +G
Sbjct: 1   MSLLNIFEISGSALSAQSQRLNVSASNLANADSVTGPDGEPYRAKQVVFEVNAAPGQSTG 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GVRV  +  D S     ++PG+P+A+  G V+ PNV+ + E  +    +R Y AN++ + 
Sbjct: 61  GVRVANVIEDPSPARLVYEPGNPLADGQGYVRMPNVDPVAEMVNTISASRSYQANVEVLN 120

Query: 120 QSHDMMTTTLDLLR 133
            +  MM  TL + +
Sbjct: 121 TTKSMMMKTLTIGQ 134


>gi|150021011|ref|YP_001306365.1| flagellar basal-body rod protein FlgC [Thermosipho melanesiensis
           BI429]
 gi|149793532|gb|ABR30980.1| flagellar basal-body rod protein FlgC [Thermosipho melanesiensis
           BI429]
          Length = 137

 Score =  118 bits (294), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 52/135 (38%), Positives = 74/135 (54%), Gaps = 7/135 (5%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG------S 58
                IA +G++ Q  R+ +I+ N+AN+ TT    G  PYRRK   F+E++        +
Sbjct: 4   FNIMTIAATGMSAQRLRIDVITNNLANSETTRTEKGE-PYRRKVPVFQELLRNVRGRLEN 62

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
           GGV VK+I  DQS F   +DP HP A+ +G VK PNVNV+ E  DM    R Y AN+   
Sbjct: 63  GGVVVKEIYEDQSPFRVVYDPTHPDADENGYVKLPNVNVVREMVDMINAQRAYEANVTAF 122

Query: 119 KQSHDMMTTTLDLLR 133
             +  M+ + L + R
Sbjct: 123 NTTKAMINSALQIGR 137


>gi|220929470|ref|YP_002506379.1| flagellar basal-body rod protein FlgC [Clostridium cellulolyticum
           H10]
 gi|219999798|gb|ACL76399.1| flagellar basal-body rod protein FlgC [Clostridium cellulolyticum
           H10]
          Length = 147

 Score =  118 bits (294), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 50/147 (34%), Positives = 73/147 (49%), Gaps = 15/147 (10%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE--------- 52
             + ++  I+ SGL  Q  RM  IS+NIANA TT  T G+   RR  +  E         
Sbjct: 1   MGIFSALDISASGLTAQRVRMDTISQNIANANTTRTTDGTPYRRRDVVFEERTDSNSFSR 60

Query: 53  ------EVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
                   ++G  GVRV  I  D + F + FDPGHP A+A G V  PNV+++ E  +M  
Sbjct: 61  TLENASSKLNGGNGVRVSSIVEDPTEFKKVFDPGHPDADAEGYVNMPNVDIVTEMVNMIS 120

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
             R Y AN+ ++  +  M    L++ +
Sbjct: 121 ATRSYEANVTSVNATKSMALKALEIGK 147


>gi|15594638|ref|NP_212427.1| flagellar basal body rod protein FlgC [Borrelia burgdorferi B31]
 gi|195941353|ref|ZP_03086735.1| flagellar basal body rod protein FlgC [Borrelia burgdorferi 80a]
 gi|216264936|ref|ZP_03436928.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi 156a]
 gi|218249308|ref|YP_002374816.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi ZS7]
 gi|221217671|ref|ZP_03589139.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi 72a]
 gi|223888936|ref|ZP_03623527.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi 64b]
 gi|224533191|ref|ZP_03673791.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi
           WI91-23]
 gi|224533682|ref|ZP_03674270.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi
           CA-11.2a]
 gi|225549042|ref|ZP_03770017.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi 94a]
 gi|225550067|ref|ZP_03771027.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi 118a]
 gi|226320594|ref|ZP_03796154.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi 29805]
 gi|2494521|sp|Q57466|FLGC_BORBU RecName: Full=Flagellar basal-body rod protein flgC
 gi|1165277|gb|AAA85616.1| FlgC [Borrelia burgdorferi]
 gi|1196316|gb|AAB51408.1| flagellar basal body rod protein [Borrelia burgdorferi]
 gi|2688173|gb|AAC66655.1| flagellar basal-body rod protein (flgC) [Borrelia burgdorferi B31]
 gi|215981409|gb|EEC22216.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi 156a]
 gi|218164496|gb|ACK74557.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi ZS7]
 gi|221192348|gb|EEE18567.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi 72a]
 gi|223885752|gb|EEF56851.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi 64b]
 gi|224511918|gb|EEF82319.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi
           WI91-23]
 gi|224512975|gb|EEF83338.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi
           CA-11.2a]
 gi|225369179|gb|EEG98632.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi 118a]
 gi|225370268|gb|EEG99706.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi 94a]
 gi|226234013|gb|EEH32734.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi 29805]
 gi|312147876|gb|ADQ30535.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi JD1]
 gi|312149272|gb|ADQ29343.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi N40]
          Length = 152

 Score =  118 bits (294), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 47/151 (31%), Positives = 70/151 (46%), Gaps = 19/151 (12%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG---- 57
             L +S ++A++GL  Q  R+ +IS NIAN  T+    G    R++ I    V +     
Sbjct: 1   MGLFSSINVASTGLTAQRLRIDVISNNIANVSTSRTPDGGPYRRQRIIFAPRVNNPYWKG 60

Query: 58  -----------SGGVRVKKIGVDQSTFVEEFDPGHPVA----NASGIVKYPNVNVLVETA 102
                        GVRV  I  D+S    ++DP HP +    +  G V+ PNVN++ E  
Sbjct: 61  PFIPDYLDNGIGQGVRVASIEKDKSPLKLKYDPAHPDSISSGDKKGYVELPNVNLVEEMV 120

Query: 103 DMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           DM   +R Y AN   I  S  M  + L +L+
Sbjct: 121 DMISASRAYEANSTVINSSKSMFRSALAILQ 151


>gi|320535379|ref|ZP_08035493.1| flagellar basal-body rod protein FlgC [Treponema phagedenis F0421]
 gi|320147781|gb|EFW39283.1| flagellar basal-body rod protein FlgC [Treponema phagedenis F0421]
          Length = 152

 Score =  117 bits (293), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 46/152 (30%), Positives = 70/152 (46%), Gaps = 20/152 (13%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG---- 57
             + +S +IA +G++ +  R  +IS+NIANA +T    G  P++R  +   E        
Sbjct: 1   MGMFSSINIAATGMSAERLRTDVISDNIANASSTRTQEGEGPFKRSRVILSEKNPEVTWR 60

Query: 58  ------------SGGVRVKKIGVDQSTFVEEFDPGHPVA----NASGIVKYPNVNVLVET 101
                         GVRV  I  D +     +DP HP A      +G V+YPNVN++ E 
Sbjct: 61  TPFVPDTIDKGVGTGVRVVSIEKDNAPSRLVYDPNHPDAIKSGPNAGYVEYPNVNIVTEM 120

Query: 102 ADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            D+   +R Y AN   I  S +M    L++ R
Sbjct: 121 VDLISASRAYEANASVILGSKEMFQRALEIGR 152


>gi|217077497|ref|YP_002335215.1| flagellar basal-body rod protein FlgC [Thermosipho africanus
           TCF52B]
 gi|217037352|gb|ACJ75874.1| flagellar basal-body rod protein FlgC [Thermosipho africanus
           TCF52B]
          Length = 137

 Score =  117 bits (293), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 52/135 (38%), Positives = 74/135 (54%), Gaps = 7/135 (5%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG------S 58
                I+ +G++ Q  R+ +IS N+AN+ TT    G  PYRRK   F+E++        +
Sbjct: 4   FNIMTISATGMSAQRLRIDVISNNLANSETTRTENGE-PYRRKVPVFQELLRNINGRLEN 62

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
           GGV VKKI  D+S F   +DP HP A+ +G VK PNVNV+ E  DM    R Y AN+   
Sbjct: 63  GGVVVKKIYEDKSPFRIVYDPTHPDADENGYVKLPNVNVVREMVDMINAQRAYEANVTAF 122

Query: 119 KQSHDMMTTTLDLLR 133
             +  M+ + L + R
Sbjct: 123 NTTKAMINSALQIGR 137


>gi|257457889|ref|ZP_05623048.1| flagellar basal-body rod protein FlgC [Treponema vincentii ATCC
           35580]
 gi|257444602|gb|EEV19686.1| flagellar basal-body rod protein FlgC [Treponema vincentii ATCC
           35580]
          Length = 151

 Score =  117 bits (293), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 46/151 (30%), Positives = 70/151 (46%), Gaps = 19/151 (12%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY--------------RRK 47
             + +S +IA +G++ +  R  +IS+NIANA TT    G                   R 
Sbjct: 1   MGIFSSINIAATGMSAERLRTDVISDNIANASTTSSQEGGYFRRSRVILAQKNDGIDWRL 60

Query: 48  TISFEEVMHGSG-GVRVKKIGVDQSTFVEEFDPGHPVA----NASGIVKYPNVNVLVETA 102
                ++  G G GVRV  I  D S     ++P HP A      +G V+YPNVN++ E  
Sbjct: 61  PFVPSDMDRGVGTGVRVTGIEKDNSEPRLSYEPDHPHAIVSGPKAGYVEYPNVNIVTEMV 120

Query: 103 DMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           D+   +R Y AN   ++ S +M    L++ R
Sbjct: 121 DLISASRSYEANAAVVQGSKEMFQRALEIGR 151


>gi|86356310|ref|YP_468202.1| flagellar basal body rod protein FlgC [Rhizobium etli CFN 42]
 gi|86280412|gb|ABC89475.1| flagellar basal-body rod protein [Rhizobium etli CFN 42]
          Length = 138

 Score =  117 bits (293), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 83/137 (60%), Positives = 106/137 (77%), Gaps = 3/137 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD L A+  IA SGL  QS R++I+SENIANAR+TGDTPG+DPYRRKTI+F + M  + G
Sbjct: 1   MDPLSAAMKIAGSGLEAQSTRLRIVSENIANARSTGDTPGADPYRRKTITFGQQMDRTSG 60

Query: 61  ---VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
              V VKK+GVD+  F  EFDP +P A+A G+VK PNVN+LVE ADMRE NR Y ANLQT
Sbjct: 61  VETVNVKKVGVDEGDFSTEFDPSNPAADAKGVVKLPNVNILVEMADMREANRSYDANLQT 120

Query: 118 IKQSHDMMTTTLDLLRD 134
           I+Q+ D++++T+DLL+ 
Sbjct: 121 IRQTRDLISSTIDLLKS 137


>gi|328545507|ref|YP_004305616.1| flagellar basal-body rod protein FlgC [polymorphum gilvum
           SL003B-26A1]
 gi|326415248|gb|ADZ72311.1| Flagellar basal-body rod protein FlgC [Polymorphum gilvum
           SL003B-26A1]
          Length = 138

 Score =  117 bits (293), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 72/136 (52%), Positives = 96/136 (70%), Gaps = 3/136 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--- 58
           D L A+  I+ SGL  QS R++++SEN+ANA++TG T G+DPY RKTI+FE     +   
Sbjct: 3   DPLAATLKISASGLQAQSERLRVVSENLANAQSTGKTKGADPYARKTITFESEFDRATAA 62

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
             V+VK IG D++ F  E+DPGHP A+  G VK PNVN+LVE ADMRETNR Y ANL+ +
Sbjct: 63  SMVKVKDIGKDKAPFTIEYDPGHPAADDDGYVKLPNVNLLVEMADMRETNRSYEANLKMM 122

Query: 119 KQSHDMMTTTLDLLRD 134
            Q+  M+  T+DLL+D
Sbjct: 123 TQARTMVMRTIDLLKD 138


>gi|1448943|gb|AAB04619.1| flagellar basal body distal rod protein [Borrelia burgdorferi]
          Length = 152

 Score =  117 bits (293), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 48/151 (31%), Positives = 74/151 (49%), Gaps = 19/151 (12%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPG--------------SDPYRRK 47
             L +S ++A++GL  Q  R+ +IS NIAN  T+    G              ++PY + 
Sbjct: 1   MGLFSSINVASTGLTAQRLRIDVISNNIANVSTSRTPDGDLIEGQRIIFAPRVNNPYWKG 60

Query: 48  TISFEEVMHGSG-GVRVKKIGVDQSTFVEEFDPGHPVA----NASGIVKYPNVNVLVETA 102
               + + +G G GVRV  I  D+S    ++DP HP +    +  G V+ PNVN++ E  
Sbjct: 61  PFIPDYLDNGIGQGVRVASIEKDKSPLKLKYDPAHPDSISSGDKKGYVELPNVNLVEEMV 120

Query: 103 DMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           DM   +R Y AN   I  S  M  + L +L+
Sbjct: 121 DMISASRAYEANSTVINSSKSMFRSALAILQ 151


>gi|318605240|emb|CBY26738.1| flagellar basal-body rod protein FlgC [Yersinia enterocolitica
           subsp. palearctica Y11]
          Length = 134

 Score =  117 bits (292), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 42/134 (31%), Positives = 67/134 (50%), Gaps = 2/134 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM--HGSG 59
             L+    IA S L+ QS R+ + + N+ANA +     G     ++ +          +G
Sbjct: 1   MSLLNIFDIAGSALSAQSQRLNVSASNMANADSVTGPDGQPYRAKQVVFQVAAQPGQETG 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GVRV +I  D +     F PG+P+ANA G V+ PNV+V  E  +    +R Y AN++ + 
Sbjct: 61  GVRVAQIIDDPAPDRLVFQPGNPLANAKGYVRMPNVDVTGEMVNTISASRSYQANVEVLN 120

Query: 120 QSHDMMTTTLDLLR 133
            +  +M  TL L +
Sbjct: 121 TTKSLMLKTLTLGQ 134


>gi|238751760|ref|ZP_04613248.1| Flagellar basal-body rod protein flgC [Yersinia rohdei ATCC 43380]
 gi|238710031|gb|EEQ02261.1| Flagellar basal-body rod protein flgC [Yersinia rohdei ATCC 43380]
          Length = 134

 Score =  117 bits (292), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 42/134 (31%), Positives = 67/134 (50%), Gaps = 2/134 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM--HGSG 59
             L+    IA S L+ QS RM + + N+ANA +     G     ++ +          +G
Sbjct: 1   MSLLNIFDIAGSALSAQSQRMNVSASNMANADSVTGPDGQPYRAKQVVFQVAAQPGQETG 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GVRV +I  D +     F PG+P+A+A G V+ PNV+V  E  +    +R Y AN++ + 
Sbjct: 61  GVRVAQIVDDPAPDRLVFQPGNPLADAKGYVRMPNVDVTGEMVNTISASRSYQANVEVLN 120

Query: 120 QSHDMMTTTLDLLR 133
            +  +M  TL L +
Sbjct: 121 TTKSLMLKTLTLGQ 134


>gi|225552253|ref|ZP_03773193.1| flagellar basal-body rod protein FlgC [Borrelia sp. SV1]
 gi|225371251|gb|EEH00681.1| flagellar basal-body rod protein FlgC [Borrelia sp. SV1]
          Length = 152

 Score =  117 bits (292), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 48/151 (31%), Positives = 71/151 (47%), Gaps = 19/151 (12%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG---- 57
             L +S ++A++GLA Q  R+ +IS NIAN  T+    G    R++ I    V +     
Sbjct: 1   MGLFSSINVASTGLAAQRLRIDVISNNIANVSTSRTPDGGPYRRQRIIFAPRVNNPYWKG 60

Query: 58  -----------SGGVRVKKIGVDQSTFVEEFDPGHPVA----NASGIVKYPNVNVLVETA 102
                        GVRV  I  D+S    ++DP HP +    +  G V+ PNVN++ E  
Sbjct: 61  PFIPDYLDNGIGQGVRVASIEKDKSPLKLKYDPTHPDSISSGDKKGYVELPNVNLVEEMV 120

Query: 103 DMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           DM   +R Y AN   I  S  M  + L +L+
Sbjct: 121 DMISASRAYEANSTVINSSKSMFRSALAILQ 151


>gi|90422608|ref|YP_530978.1| flagellar basal body rod protein FlgC [Rhodopseudomonas palustris
           BisB18]
 gi|90104622|gb|ABD86659.1| flagellar basal-body rod protein FlgC [Rhodopseudomonas palustris
           BisB18]
          Length = 139

 Score =  117 bits (292), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 75/136 (55%), Positives = 100/136 (73%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           +D L AS  IA+SGL  QS R++++SEN+ANA +TG +PG++PY+RKT +F   M  + G
Sbjct: 2   IDPLQASVQIASSGLEAQSTRLRVVSENLANANSTGRSPGAEPYQRKTTTFTAEMDRAAG 61

Query: 61  VRVKK---IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           V V K   IGVD++ F  ++ PGHP A+ SG VK PNVN+L+E ADMRETNR Y ANLQ 
Sbjct: 62  VPVVKVKDIGVDRAPFRLDYQPGHPAADQSGYVKLPNVNMLIEMADMRETNRTYEANLQV 121

Query: 118 IKQSHDMMTTTLDLLR 133
           IKQ+  M++ T+DLLR
Sbjct: 122 IKQTRSMVSMTIDLLR 137


>gi|238788313|ref|ZP_04632107.1| Flagellar basal-body rod protein flgC [Yersinia frederiksenii ATCC
           33641]
 gi|238723559|gb|EEQ15205.1| Flagellar basal-body rod protein flgC [Yersinia frederiksenii ATCC
           33641]
          Length = 134

 Score =  117 bits (292), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 41/134 (30%), Positives = 67/134 (50%), Gaps = 2/134 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM--HGSG 59
             L+    IA S L+ QS RM + + N+ANA +     G     ++ +          +G
Sbjct: 1   MSLLNIFDIAGSALSAQSQRMNVSASNMANADSVTGPDGQPYRAKQVVFQVAAQPGQETG 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GVRV ++  D +     F PG+P+A+A G V+ PNV+V  E  +    +R Y AN++ + 
Sbjct: 61  GVRVAQVVDDPAPDRLVFQPGNPLADAKGYVRMPNVDVTGEMVNTISASRSYQANVEVLN 120

Query: 120 QSHDMMTTTLDLLR 133
            +  +M  TL L +
Sbjct: 121 TTKSLMLKTLTLGQ 134


>gi|226321611|ref|ZP_03797137.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi Bol26]
 gi|226232800|gb|EEH31553.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi Bol26]
          Length = 152

 Score =  117 bits (292), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 48/151 (31%), Positives = 71/151 (47%), Gaps = 19/151 (12%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG---- 57
             L +S ++A++GL  Q  R+ +IS NIAN  T+    G    R++ I    V +     
Sbjct: 1   MGLFSSINVASTGLTAQRLRIDVISNNIANVSTSRTPDGGPYRRQRIIFAPRVNNPYWKG 60

Query: 58  -----------SGGVRVKKIGVDQSTFVEEFDPGHPVA----NASGIVKYPNVNVLVETA 102
                      S GVRV  I  D+S    ++DP HP +    +  G V+ PNVN++ E  
Sbjct: 61  PFIPDYLDNGISQGVRVASIEKDKSPLKLKYDPAHPDSISSGDKKGYVELPNVNLVEEMV 120

Query: 103 DMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           DM   +R Y AN   I  S  M  + L +L+
Sbjct: 121 DMISASRAYEANSTVINSSKSMFRSALAILQ 151


>gi|270262403|ref|ZP_06190674.1| flagellar basal-body rod protein FlgC [Serratia odorifera 4Rx13]
 gi|270043087|gb|EFA16180.1| flagellar basal-body rod protein FlgC [Serratia odorifera 4Rx13]
          Length = 134

 Score =  117 bits (292), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 39/134 (29%), Positives = 67/134 (50%), Gaps = 2/134 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM--HGSG 59
             L+    I+ S L+ QS RM + + N+ANA +     G     ++ +          +G
Sbjct: 1   MSLLNIFDISGSALSAQSQRMNVSASNMANADSVTGPDGEPYRAKQVVFEVAAAAGQPTG 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GVRV ++  D +     + PG+P+A+  G V+ PNV+V+ E  +    +R Y AN++ + 
Sbjct: 61  GVRVSQVVDDPAPERLVYQPGNPLADGKGYVRMPNVDVVSEMVNTISASRSYQANVEVLN 120

Query: 120 QSHDMMTTTLDLLR 133
            +  MM  TL L +
Sbjct: 121 TTKSMMMKTLTLGQ 134


>gi|303240290|ref|ZP_07326809.1| flagellar basal-body rod protein FlgC [Acetivibrio cellulolyticus
           CD2]
 gi|302592200|gb|EFL61929.1| flagellar basal-body rod protein FlgC [Acetivibrio cellulolyticus
           CD2]
          Length = 146

 Score =  116 bits (291), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 50/146 (34%), Positives = 70/146 (47%), Gaps = 14/146 (9%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--- 58
               +S  I  SGL  Q  RM  IS+NIANA TT    G+   R+  +  E+        
Sbjct: 1   MGYFSSLDIGASGLTAQRLRMDTISQNIANANTTRTENGTAYRRKVVVFEEKSSDTPFSE 60

Query: 59  -----------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                      GGVRV +I  D S   + +DPGHP A+ +G V+ PNV++L E  +M   
Sbjct: 61  YLNESSKKMVGGGVRVARITEDTSALKKIYDPGHPDADENGYVEMPNVDILTEMVNMISA 120

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y AN+ +I  +  M    L++ R
Sbjct: 121 TRSYEANVTSINTTKSMAMKALEIGR 146


>gi|182680550|ref|YP_001834696.1| flagellar basal body rod protein FlgC [Beijerinckia indica subsp.
           indica ATCC 9039]
 gi|182636433|gb|ACB97207.1| flagellar basal-body rod protein FlgC [Beijerinckia indica subsp.
           indica ATCC 9039]
          Length = 138

 Score =  116 bits (291), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 72/137 (52%), Positives = 95/137 (69%), Gaps = 3/137 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           +D L AS  IA SGL  QS R+++ISEN+AN+ +TG T G++PY+RKT++F   M    G
Sbjct: 2   IDPLKASMKIAGSGLEAQSTRLRVISENMANSESTGTTAGANPYQRKTVTFSSEMDRLSG 61

Query: 61  ---VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
              V++K IG D + F  E DPG+P A+  G VK PNVN+L+E ADMRE NR Y ANLQ 
Sbjct: 62  LDLVQIKSIGKDTTPFQREHDPGNPAADDKGFVKRPNVNILIEMADMREANRSYEANLQV 121

Query: 118 IKQSHDMMTTTLDLLRD 134
           +KQ+ D+ T T+DLLR 
Sbjct: 122 LKQARDLSTMTIDLLRS 138


>gi|319403959|emb|CBI77547.1| Flagellar basal-body rod protein flgC [Bartonella rochalimae ATCC
           BAA-1498]
          Length = 138

 Score =  116 bits (291), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 67/135 (49%), Positives = 101/135 (74%), Gaps = 3/135 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG---S 58
           D LIA+  IA +GL+ QS R+++I+EN+ANA +TG +PG+ PY+RKT+SFE  ++    +
Sbjct: 3   DRLIAAEQIATTGLSAQSTRLRVIAENLANANSTGKSPGARPYQRKTVSFEATLNPYLDA 62

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
            GV V +I  D++ F+  ++PGH  A+++G VKYPNVN ++E ADMRE NR Y ANLQ I
Sbjct: 63  QGVHVTRISTDKAPFIMRYEPGHLAADSNGYVKYPNVNSIIEMADMREANRSYEANLQVI 122

Query: 119 KQSHDMMTTTLDLLR 133
           +Q+ D+++ T+DLL+
Sbjct: 123 RQARDLISQTIDLLK 137


>gi|15887900|ref|NP_353581.1| flagellar basal body rod protein FlgC [Agrobacterium tumefaciens
           str. C58]
 gi|20141427|sp|Q44336|FLGC_AGRT5 RecName: Full=Flagellar basal-body rod protein flgC
 gi|15155492|gb|AAK86366.1| flagellar basal-body rod protein [Agrobacterium tumefaciens str.
           C58]
          Length = 139

 Score =  116 bits (291), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 81/136 (59%), Positives = 107/136 (78%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD L A++ IA SGL VQS R++I+SENIANAR+TGDTPG+DPYRRKT++F   +    G
Sbjct: 1   MDPLSAASKIAGSGLEVQSTRLRIVSENIANARSTGDTPGADPYRRKTVTFGSELDHVSG 60

Query: 61  ---VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
              V+VKK+GVD+  FV E+DPG+P A+ +G+VK PNVNVL+E ADMRE NR Y ANLQ 
Sbjct: 61  VERVKVKKLGVDRGDFVHEYDPGNPAADTNGMVKMPNVNVLIEMADMREANRSYDANLQV 120

Query: 118 IKQSHDMMTTTLDLLR 133
           I+Q+ D++ +T+DLL+
Sbjct: 121 IRQTRDLVASTIDLLK 136


>gi|295399807|ref|ZP_06809788.1| flagellar basal-body rod protein FlgC [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|312111681|ref|YP_003989997.1| flagellar basal-body rod protein FlgC [Geobacillus sp. Y4.1MC1]
 gi|294978210|gb|EFG53807.1| flagellar basal-body rod protein FlgC [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|311216782|gb|ADP75386.1| flagellar basal-body rod protein FlgC [Geobacillus sp. Y4.1MC1]
          Length = 150

 Score =  116 bits (291), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 45/150 (30%), Positives = 65/150 (43%), Gaps = 18/150 (12%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGD---TPGSDPYRRK----------- 47
             +  +  I  S L  Q  RM ++S N+AN  TT         +PYRRK           
Sbjct: 1   MSMFQNLDITASALTAQRLRMDVVSSNMANVDTTRARFVNGQWEPYRRKLVVMEPRQEGF 60

Query: 48  ----TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETAD 103
                 +        GGVRV KI  D + F   +DP HP A+ +G V+ PNV+ L E  D
Sbjct: 61  STYLQAAMNSRDSVGGGVRVTKIVEDPAPFKLVYDPSHPDADRNGYVRLPNVDPLKEMVD 120

Query: 104 MRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +    R Y AN+     +  M+   L++ +
Sbjct: 121 LMSATRSYEANVTVFNATKGMLMKALEIGK 150


>gi|150395483|ref|YP_001325950.1| flagellar basal body rod protein FlgC [Sinorhizobium medicae
           WSM419]
 gi|150026998|gb|ABR59115.1| flagellar basal-body rod protein FlgC [Sinorhizobium medicae
           WSM419]
          Length = 139

 Score =  116 bits (291), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 76/136 (55%), Positives = 101/136 (74%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD L ++  ++ SGL  +S R++I+SENIANAR+TGD PG+DPYRRKTISF   +  + G
Sbjct: 1   MDPLTSALKVSASGLQAESTRLRIVSENIANARSTGDAPGTDPYRRKTISFAAEVDRASG 60

Query: 61  V---RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
                V+++G D S F  EFDPG+P A+  G+VK PNVN+L+E ADMRE NR Y ANLQT
Sbjct: 61  ASLVEVERLGTDDSDFNVEFDPGNPAADEKGMVKLPNVNILIEMADMREANRAYEANLQT 120

Query: 118 IKQSHDMMTTTLDLLR 133
           IKQ+ D+++ T+DLLR
Sbjct: 121 IKQARDLISQTIDLLR 136


>gi|51246506|ref|YP_066390.1| flagellar basal body rod protein (FlgC) [Desulfotalea psychrophila
           LSv54]
 gi|50877543|emb|CAG37383.1| probable flagellar basal body rod protein (FlgC) [Desulfotalea
           psychrophila LSv54]
          Length = 143

 Score =  116 bits (291), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 45/143 (31%), Positives = 64/143 (44%), Gaps = 11/143 (7%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--- 58
             ++ S  I++S L  QS R+  IS NIANA TT    G    ++      + +  +   
Sbjct: 1   MDILNSFKISSSALKAQSIRLDTISSNIANAETTSTPEGGPYKKKSVYFQAKPLTFAEQL 60

Query: 59  --------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRL 110
                    GV V  I  D+S   + +DP HP A   G V  PNV+ L E  DM    R 
Sbjct: 61  NGSLNAKTTGVEVINIIEDKSEPRKVYDPSHPDAGKDGYVDMPNVDTLKEMVDMMSATRS 120

Query: 111 YMANLQTIKQSHDMMTTTLDLLR 133
           Y AN+  I+ +  M    L++ R
Sbjct: 121 YQANVTAIQSAKRMALKALEIGR 143


>gi|312126817|ref|YP_003991691.1| flagellar basal-body rod protein flgc [Caldicellulosiruptor
           hydrothermalis 108]
 gi|311776836|gb|ADQ06322.1| flagellar basal-body rod protein FlgC [Caldicellulosiruptor
           hydrothermalis 108]
          Length = 147

 Score =  116 bits (290), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 47/147 (31%), Positives = 73/147 (49%), Gaps = 15/147 (10%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR--------------- 46
             +  + +I++S L  Q  RM +I++NIANA TT    G    R+               
Sbjct: 1   MGMFDAINISSSALTAQRVRMDVIAQNIANANTTKTENGQPYRRKVVVFEERRQSFAEIL 60

Query: 47  KTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
                +      GGVRVK I  D S F + +DP HP A+ +G V YPNV+++ E  +M E
Sbjct: 61  SQKIGQAQASSYGGVRVKAILEDPSPFKKVYDPTHPDADQNGYVNYPNVDIVTEMVNMIE 120

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
            +R Y AN+  +  +  M+T T ++ +
Sbjct: 121 ASRSYEANVTALNITKSMITRTFEIGK 147


>gi|94500239|ref|ZP_01306772.1| flagellar basal-body rod protein FlgC [Oceanobacter sp. RED65]
 gi|94427538|gb|EAT12515.1| flagellar basal-body rod protein FlgC [Oceanobacter sp. RED65]
          Length = 148

 Score =  116 bits (290), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 41/148 (27%), Positives = 62/148 (41%), Gaps = 16/148 (10%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH----- 56
             L    ++A +G+  QS R+   + NIANA T   +       RK              
Sbjct: 1   MSLTNVFNVAGTGMNAQSVRLNTTASNIANAETVSSSIDETYRARKPWFQALQKEWDDIE 60

Query: 57  -----------GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
                         GV V  I    +     F+P HP+A+  G V YPNVN++ E  DM 
Sbjct: 61  GLSDKLELRKGVGDGVHVAAIVESDAPLKRRFEPHHPMADEEGYVMYPNVNIVEEMTDMM 120

Query: 106 ETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++R Y  N++ +K +  M+  TL L +
Sbjct: 121 SSSRSYQMNVEMMKTAKQMLQRTLTLGQ 148


>gi|296447440|ref|ZP_06889365.1| flagellar basal-body rod protein FlgC [Methylosinus trichosporium
           OB3b]
 gi|296255060|gb|EFH02162.1| flagellar basal-body rod protein FlgC [Methylosinus trichosporium
           OB3b]
          Length = 139

 Score =  116 bits (290), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 68/136 (50%), Positives = 95/136 (69%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD L AS  IA SGL+ QSAR+++++EN+ANA++   T G  PY RKTISF+  +  + G
Sbjct: 1   MDPLQASMKIAGSGLSAQSARLRVVAENMANAQSVAKTAGGAPYSRKTISFQSEVDRASG 60

Query: 61  V---RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
               +V  IGVD++ F  E DPG+P A+  G VKYPNVN++ E ADMRE NR Y AN+Q 
Sbjct: 61  ASLVQVGPIGVDRAPFRVEHDPGNPAADTDGYVKYPNVNLMTEVADMREANRSYEANVQV 120

Query: 118 IKQSHDMMTTTLDLLR 133
           +KQ+ ++ + T+DLL+
Sbjct: 121 MKQTRELFSMTIDLLK 136


>gi|238764390|ref|ZP_04625340.1| Flagellar basal-body rod protein flgC [Yersinia kristensenii ATCC
           33638]
 gi|238697416|gb|EEP90183.1| Flagellar basal-body rod protein flgC [Yersinia kristensenii ATCC
           33638]
          Length = 134

 Score =  116 bits (290), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 40/134 (29%), Positives = 67/134 (50%), Gaps = 2/134 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM--HGSG 59
             L+    IA S L+ QS RM + + N+ANA +     G     ++ +          +G
Sbjct: 1   MSLLNIFDIAGSALSAQSQRMNVSASNMANADSVTGPDGQPYRAKQVVFQVAAQPGQETG 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GVRV ++  D +     F PG+P+A+A G V+ PNV++  E  +    +R Y AN++ + 
Sbjct: 61  GVRVAQVIDDPAPDRLVFQPGNPLADAKGYVRMPNVDITGEMVNTISASRSYQANVEVLN 120

Query: 120 QSHDMMTTTLDLLR 133
            +  +M  TL L +
Sbjct: 121 TTKSLMLKTLTLGQ 134


>gi|217976223|ref|YP_002360370.1| flagellar basal body rod protein FlgC [Methylocella silvestris BL2]
 gi|217501599|gb|ACK49008.1| flagellar basal-body rod protein FlgC [Methylocella silvestris BL2]
          Length = 140

 Score =  116 bits (290), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 75/137 (54%), Positives = 100/137 (72%), Gaps = 3/137 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           +D L AS  +A SGL  QSAR++I+SEN+ANA++TG TPG+DPY RKTI+F   +  + G
Sbjct: 2   IDPLEASLRVAGSGLEAQSARLRIVSENLANAQSTGSTPGADPYARKTITFASELDRASG 61

Query: 61  V---RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           V   RVK IG D++ F  E DPG+P A++ G VK PNVNV++E ADMRE NR Y ANLQ 
Sbjct: 62  VDLVRVKGIGADKAPFRVEQDPGNPAADSKGFVKLPNVNVIMEMADMREANRSYEANLQI 121

Query: 118 IKQSHDMMTTTLDLLRD 134
           +KQ+ ++ + T+DLLR 
Sbjct: 122 VKQTRELSSMTVDLLRS 138


>gi|42526722|ref|NP_971820.1| flagellar basal body rod protein FlgC [Treponema denticola ATCC
           35405]
 gi|41817037|gb|AAS11731.1| flagellar basal-body rod protein FlgC [Treponema denticola ATCC
           35405]
          Length = 151

 Score =  116 bits (290), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 47/151 (31%), Positives = 64/151 (42%), Gaps = 19/151 (12%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS----------- 50
             L  S +IA +G+ V+  R  +IS NIANA +     G    R + I            
Sbjct: 1   MGLFTSINIAATGMGVERLRTDVISNNIANASSLETQEGGPFKRSRVIVGQKKSGIDWQT 60

Query: 51  ----FEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVA----NASGIVKYPNVNVLVETA 102
                        GV+V  I  D S     +DP HP A       G V+YPNVN++ E  
Sbjct: 61  PFTPQNVERGVGEGVKVLSIEKDTSDTRWVYDPTHPKALKYGPKEGYVEYPNVNIVTEMV 120

Query: 103 DMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           D+   +R Y ANL  +  + DM    LD+ R
Sbjct: 121 DLISASRAYEANLAVVNGAKDMFQRALDIAR 151


>gi|306820111|ref|ZP_07453759.1| flagellar basal-body rod protein FlgC [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
 gi|304551889|gb|EFM39832.1| flagellar basal-body rod protein FlgC [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
          Length = 145

 Score =  116 bits (290), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 48/145 (33%), Positives = 68/145 (46%), Gaps = 13/145 (8%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--- 58
             + +  +I  + L  +  RM IIS+NIANA+TT    G    R+  +  E     S   
Sbjct: 1   MSIFSGMNINATALTAERLRMDIISKNIANAQTTRTKNGLPYKRQVAVFKEAEGDSSFKS 60

Query: 59  ----------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                     GGV V  I  D+S F   +DPGHP A+ +G VK PNV ++ E  DM    
Sbjct: 61  VLENKRKKDTGGVEVVGIVEDKSDFKLRYDPGHPDADENGYVKMPNVELITEMVDMITAQ 120

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R Y AN   +  S  M+   +D+ +
Sbjct: 121 RAYEANATAVNTSKAMLQKAIDIGK 145


>gi|163794133|ref|ZP_02188106.1| flagellar basal body rod protein [alpha proteobacterium BAL199]
 gi|159180747|gb|EDP65266.1| flagellar basal body rod protein [alpha proteobacterium BAL199]
          Length = 136

 Score =  116 bits (290), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 58/135 (42%), Positives = 84/135 (62%), Gaps = 3/135 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH---GS 58
             L  +  I+ SG+  Q  R+++++EN+ANA + G+T   DPYRRKTI+FE  +     +
Sbjct: 1   MDLTNAIKISASGMRAQGTRLRVVAENVANAESLGNTAADDPYRRKTITFENELDRKINA 60

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
             VR+ KIG DQ  F   ++P HP+A+  G +K PNVN L+E  DMRE  R Y AN+  I
Sbjct: 61  DMVRISKIGRDQGDFNIVYEPHHPLADDKGYIKMPNVNTLIEMTDMREAERSYEANVSVI 120

Query: 119 KQSHDMMTTTLDLLR 133
           + S  ++  TL+LLR
Sbjct: 121 ESSKSLIERTLELLR 135


>gi|238758112|ref|ZP_04619292.1| Flagellar basal-body rod protein flgC [Yersinia aldovae ATCC 35236]
 gi|238703650|gb|EEP96187.1| Flagellar basal-body rod protein flgC [Yersinia aldovae ATCC 35236]
          Length = 134

 Score =  116 bits (290), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 41/134 (30%), Positives = 67/134 (50%), Gaps = 2/134 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM--HGSG 59
             L+    IA S L+ QS R+ + + N+ANA +     G     ++ +          +G
Sbjct: 1   MSLLNIFDIAGSALSAQSQRLNVSASNMANAESVTGPDGQPYRAKQVVFQVAAQAGQETG 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GVRV +I  D +     F PG+P+A+A G V+ PNV+V  E  +    +R Y AN++ + 
Sbjct: 61  GVRVSQIVDDPAPDRLVFQPGNPLADAKGYVRMPNVDVTGEMINTISASRSYQANVEVLN 120

Query: 120 QSHDMMTTTLDLLR 133
            +  +M  TL L +
Sbjct: 121 TTKSLMLKTLTLGQ 134


>gi|325473784|gb|EGC76972.1| FlgC protein [Treponema denticola F0402]
          Length = 151

 Score =  116 bits (290), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 47/151 (31%), Positives = 66/151 (43%), Gaps = 19/151 (12%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE-------- 53
             L  S +IA +G+ V+  R  +IS NIANA +     G    R + I  ++        
Sbjct: 1   MGLFTSINIAATGMGVERLRTDVISNNIANASSLETQEGGPFKRSRVIVGQKKSGIDWQT 60

Query: 54  -------VMHGSGGVRVKKIGVDQSTFVEEFDPGHPVA----NASGIVKYPNVNVLVETA 102
                        GV+V  I  D S     +DP HP A       G V+YPNVN++ E  
Sbjct: 61  PFTPQNIERGVGEGVKVLSIEKDTSDTRWVYDPTHPKALKYGPKEGYVEYPNVNIVTEMV 120

Query: 103 DMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           D+   +R Y ANL  +  + DM    LD+ R
Sbjct: 121 DLISASRAYEANLAVVNGAKDMFQRALDIAR 151


>gi|23499914|ref|NP_699354.1| flagellar basal body rod protein FlgC [Brucella suis 1330]
 gi|23463491|gb|AAN33359.1| flagellar basal-body rod protein FlgC [Brucella suis 1330]
          Length = 140

 Score =  116 bits (290), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 71/136 (52%), Positives = 97/136 (71%), Gaps = 3/136 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
           D L ++  IA SGL+ QS R+ I+SENIANA++T  T  +DPYRRKT+SF   +    G 
Sbjct: 4   DALQSTLKIAASGLSAQSTRLCIVSENIANAQSTAKTADTDPYRRKTVSFRTELEQGTGA 63

Query: 62  ---RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
              RV ++G D S F+E++DP HP A+A G VKYPNVN++VE ADMRE NR Y ANLQ +
Sbjct: 64  AEVRVAEVGKDTSPFIEQYDPSHPAADARGYVKYPNVNMVVEMADMREANRSYEANLQVV 123

Query: 119 KQSHDMMTTTLDLLRD 134
           +Q+ ++++ T+DLLR 
Sbjct: 124 RQARELISMTIDLLRS 139


>gi|163744319|ref|ZP_02151679.1| flagellar basal body rod protein [Oceanibulbus indolifex HEL-45]
 gi|161381137|gb|EDQ05546.1| flagellar basal body rod protein [Oceanibulbus indolifex HEL-45]
          Length = 136

 Score =  116 bits (290), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 67/136 (49%), Positives = 94/136 (69%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD L + A IA SG+  Q+AR+++ISEN+ANA +TG TPG+DP+RRKTISF E++  +GG
Sbjct: 1   MDPLQSIAKIAASGMTAQTARLRVISENVANADSTGTTPGADPFRRKTISFSELIDRNGG 60

Query: 61  ---VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
              V V +IG DQS F  ++DP HP A+ +G V  PNV+ ++E A+MRE +R Y AN+  
Sbjct: 61  GSLVEVDRIGRDQSPFRRDYDPAHPAADETGYVNRPNVDPIIEMANMREASRNYEANMNM 120

Query: 118 IKQSHDMMTTTLDLLR 133
            +    M +  LDLL+
Sbjct: 121 FESGRRMRSQMLDLLK 136


>gi|238028851|ref|YP_002913082.1| flagellar basal body rod protein FlgC [Burkholderia glumae BGR1]
 gi|237878045|gb|ACR30378.1| Flagellar basal-body rod protein FlgC [Burkholderia glumae BGR1]
          Length = 141

 Score =  116 bits (290), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 39/140 (27%), Positives = 71/140 (50%), Gaps = 8/140 (5%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM----- 55
           M  L+    +A S ++ +S R+ + + N+ANA +     G     ++ +   + +     
Sbjct: 1   MPSLMNIFDVAGSAMSAESQRLNVTASNLANADSVTGPDGKPYRAKQVVFETQPLGGART 60

Query: 56  ---HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
               G GGV+VK++  D S     +DP +P A+A+G V  PNV+ + E  +M   +R Y 
Sbjct: 61  RSGQGVGGVQVKQVIDDPSPMKTSYDPSNPTADANGYVTLPNVDPVQEMVNMISASRSYQ 120

Query: 113 ANLQTIKQSHDMMTTTLDLL 132
           AN++T+  +  +M  TL + 
Sbjct: 121 ANVETLNTAKQLMLKTLTIG 140


>gi|291613036|ref|YP_003523193.1| flagellar basal-body rod protein FlgC [Sideroxydans lithotrophicus
           ES-1]
 gi|291583148|gb|ADE10806.1| flagellar basal-body rod protein FlgC [Sideroxydans lithotrophicus
           ES-1]
          Length = 134

 Score =  116 bits (290), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 35/134 (26%), Positives = 61/134 (45%), Gaps = 2/134 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF--EEVMHGSG 59
             L    +IA S +  QS R+ +++ N+AN  +     G     ++ +            
Sbjct: 1   MSLFNIFNIAGSAMTAQSQRLNVVASNLANVDSATGPDGKPYKAKQVVFSTVPITGQVGE 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GV+V  +  D S     +DP +P+A+  G V  PNVN + E  +M   +R Y  N+  + 
Sbjct: 61  GVKVAAVVEDNSPMKTVYDPKNPLADGQGYVTMPNVNPVDEMVNMISASRSYQNNVDVLN 120

Query: 120 QSHDMMTTTLDLLR 133
            S  ++T TL + +
Sbjct: 121 TSKTLLTKTLTIGQ 134


>gi|147678426|ref|YP_001212641.1| flagellar basal body rod protein [Pelotomaculum thermopropionicum
           SI]
 gi|146274523|dbj|BAF60272.1| flagellar basal body rod protein [Pelotomaculum thermopropionicum
           SI]
          Length = 147

 Score =  116 bits (290), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 47/146 (32%), Positives = 70/146 (47%), Gaps = 14/146 (9%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTG--DTPGSDPYRRKTISFEEVMHG-- 57
             L  S  I+ SGL  +  R+ +IS NIAN  T G  D P    YRR+   F +V+    
Sbjct: 1   MGLFDSFAISASGLTAERLRLDLISNNIANMNTAGRPDDPAVPAYRRRFPVFAQVLQEVR 60

Query: 58  ----------SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                       GVRV +I  D S     ++P HP+A+  G V YPN+N++ E  +M   
Sbjct: 61  SAGTARPRYKGAGVRVIRIVEDHSPPRLAYEPSHPLADERGYVAYPNINIVNEMINMITA 120

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y AN+  +  + D+    +++ R
Sbjct: 121 TRSYEANVTALNAAKDIALKAIEIGR 146


>gi|83589621|ref|YP_429630.1| flagellar basal-body rod protein FlgC [Moorella thermoacetica ATCC
           39073]
 gi|83572535|gb|ABC19087.1| flagellar basal-body rod protein FlgC [Moorella thermoacetica ATCC
           39073]
          Length = 145

 Score =  116 bits (290), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 47/146 (32%), Positives = 69/146 (47%), Gaps = 15/146 (10%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             L+ +  I+ SGL  +  R+ II+ N+AN  TT  TP   PYRR+   F E +  + G 
Sbjct: 1   MELLPALAISASGLTAERLRLDIIANNLANINTTR-TPRGGPYRREVPVFAERLQEAMGQ 59

Query: 62  --------------RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                          V  I  D S     +DP HP A+A+G V  PN+N++ E  DM   
Sbjct: 60  LPGRPSSRAPGAGVEVAAIVEDNSPPRLVYDPSHPDADANGYVHLPNINIVNEMVDMITA 119

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
           +R Y AN+  +  +  M    L++ R
Sbjct: 120 SRAYEANVTVLNAAKAMTLKALEIGR 145


>gi|319406974|emb|CBI80611.1| Flagellar basal-body rod protein flgC [Bartonella sp. 1-1C]
          Length = 138

 Score =  116 bits (290), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 67/135 (49%), Positives = 101/135 (74%), Gaps = 3/135 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG---S 58
           D LIA+  IA +GL+ QS R+++I+EN+ANA +TG +PG+ PY+RKT+SFE  ++    +
Sbjct: 3   DRLIAAEQIATTGLSAQSTRLRVIAENLANANSTGKSPGARPYQRKTVSFEATLNPYIDA 62

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
            GV V +I  D++ F+  ++PGH  A+++G VKYPNVN ++E ADMRE NR Y ANLQ I
Sbjct: 63  QGVHVTRISTDKAPFIMRYEPGHLAADSNGYVKYPNVNSIIEMADMREANRSYEANLQVI 122

Query: 119 KQSHDMMTTTLDLLR 133
           +Q+ D+++ T+DLL+
Sbjct: 123 RQARDLISQTIDLLK 137


>gi|312792645|ref|YP_004025568.1| flagellar basal-body rod protein flgc [Caldicellulosiruptor
           kristjanssonii 177R1B]
 gi|312179785|gb|ADQ39955.1| flagellar basal-body rod protein FlgC [Caldicellulosiruptor
           kristjanssonii 177R1B]
          Length = 147

 Score =  116 bits (289), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 48/147 (32%), Positives = 74/147 (50%), Gaps = 15/147 (10%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR--------------- 46
             +  + +I++S LA Q  RM +I++NIANA TT    G    R+               
Sbjct: 1   MGMFDAINISSSALAAQRVRMDVIAQNIANANTTRTENGQPYRRKVVVFEERKQSFADIL 60

Query: 47  KTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
                +      GGVRVK I  D S F + +DP HP A+ +G V YPNV+++ E  +M E
Sbjct: 61  TQKIGQAQSSSYGGVRVKAILEDPSPFKKVYDPTHPDADQNGYVNYPNVDIVTEMVNMIE 120

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
            +R Y AN+  +  +  M+T T ++ +
Sbjct: 121 ASRSYEANVTALNITKSMITRTFEIGK 147


>gi|90418393|ref|ZP_01226305.1| flagellar basal-body rod protein flgC [Aurantimonas manganoxydans
           SI85-9A1]
 gi|90338065|gb|EAS51716.1| flagellar basal-body rod protein flgC [Aurantimonas manganoxydans
           SI85-9A1]
          Length = 138

 Score =  116 bits (289), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 75/136 (55%), Positives = 97/136 (71%), Gaps = 3/136 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
           D L++S  IA SGL  QS RM+I+SENIANA+TTG TPGSDPY+RK +SF+  +    G 
Sbjct: 3   DPLLSSLKIAASGLQAQSTRMRIVSENIANAQTTGTTPGSDPYQRKMVSFQSELDRVSGA 62

Query: 62  R---VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
           +   V K+G D + F+ E DPG+P ANA G VK PNV +LVE ADMRE NR Y AN+Q +
Sbjct: 63  QMVSVDKVGRDDTPFILESDPGNPAANADGYVKMPNVRMLVEMADMREANRSYEANIQVV 122

Query: 119 KQSHDMMTTTLDLLRD 134
           KQ+ +++  T+DLLR 
Sbjct: 123 KQAREIINMTIDLLRS 138


>gi|238755326|ref|ZP_04616669.1| Flagellar basal-body rod protein flgC [Yersinia ruckeri ATCC 29473]
 gi|238706462|gb|EEP98836.1| Flagellar basal-body rod protein flgC [Yersinia ruckeri ATCC 29473]
 gi|253317693|gb|ACT22782.1| flagellar basal body rod protein FlgC [Yersinia ruckeri]
          Length = 134

 Score =  116 bits (289), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 44/134 (32%), Positives = 68/134 (50%), Gaps = 2/134 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM--HGSG 59
             L+    IA S L+ QS RM + + N+ANA +     G     ++ +          +G
Sbjct: 1   MSLLNIFDIAGSALSAQSQRMNVSASNMANADSVTGPDGQPYRAKQVVFQVANQGAQETG 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GVRV +I  D S     F PG+P+A+A G V+ PNV+V+ E  +    +R Y AN++ + 
Sbjct: 61  GVRVAQIVEDTSPDRLVFQPGNPLADAKGYVRMPNVDVVGEMVNTISASRSYQANVEVLN 120

Query: 120 QSHDMMTTTLDLLR 133
            +  MM  TL L +
Sbjct: 121 TTKSMMLKTLTLGQ 134


>gi|218549198|ref|YP_002382989.1| flagellar basal body rod protein FlgC [Escherichia fergusonii ATCC
           35469]
 gi|218356739|emb|CAQ89367.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia fergusonii ATCC 35469]
 gi|324113869|gb|EGC07843.1| flagellar basal-body rod protein FlgC [Escherichia fergusonii B253]
 gi|325497618|gb|EGC95477.1| flagellar basal body rod protein FlgC [Escherichia fergusonii
           ECD227]
          Length = 134

 Score =  116 bits (289), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 41/134 (30%), Positives = 68/134 (50%), Gaps = 2/134 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--G 59
             L+    IA S L  QS R+ + + N+ANA +     G     +  +   +   G+  G
Sbjct: 1   MALLNIFDIAGSALTAQSQRLNVAASNLANADSVTGPDGQPYRAKHVVFQVDNAPGAATG 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GV+V  +   Q+     ++PG+P+A+A+G VK PNV+V+ E  +    +R Y AN++ + 
Sbjct: 61  GVKVAGVVESQAPDKLVYEPGNPLADANGYVKMPNVDVVGEMVNTMSASRSYQANVEVLN 120

Query: 120 QSHDMMTTTLDLLR 133
               MM  TL L +
Sbjct: 121 TVKSMMLKTLTLGQ 134


>gi|295096227|emb|CBK85317.1| flagellar basal-body rod protein FlgC [Enterobacter cloacae subsp.
           cloacae NCTC 9394]
          Length = 134

 Score =  116 bits (289), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 42/134 (31%), Positives = 69/134 (51%), Gaps = 2/134 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--G 59
             L+    IA S L  QS R+ + + N+ANA +     G     ++ +   +   G+  G
Sbjct: 1   MALLNIFDIAGSALTAQSKRLNVAASNLANADSVTGPDGQPYRAKQVVFQVDAAPGAATG 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GV+V  +   Q+     ++PG+P+A+ASG VK PNV+V+ E  +    +R Y AN++ + 
Sbjct: 61  GVKVADVVESQAPDKLVYEPGNPLADASGYVKMPNVDVVGEMVNSMSASRSYQANVEVLN 120

Query: 120 QSHDMMTTTLDLLR 133
               MM  TL L +
Sbjct: 121 TVKSMMLKTLTLGQ 134


>gi|222147569|ref|YP_002548526.1| flagellar basal body rod protein FlgC [Agrobacterium vitis S4]
 gi|221734557|gb|ACM35520.1| flagellar basal-body rod protein [Agrobacterium vitis S4]
          Length = 145

 Score =  115 bits (288), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 78/136 (57%), Positives = 103/136 (75%), Gaps = 3/136 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
           D L ++  IA SGL VQS R++I+SENIANA++TGDTPG++PYRRKTI+F   M  + G 
Sbjct: 8   DPLTSALKIAGSGLDVQSTRLRIVSENIANAQSTGDTPGANPYRRKTITFGSEMDRATGT 67

Query: 62  RVKKI---GVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
            + K+   G D+S F EE+DP +P A+A G VK PNVNVL+E ADMRE NR Y ANLQ++
Sbjct: 68  EIVKVKKLGFDKSNFTEEYDPSNPAADAKGYVKMPNVNVLIEMADMREANRTYEANLQSV 127

Query: 119 KQSHDMMTTTLDLLRD 134
           KQ+ D++T+TLDLL+ 
Sbjct: 128 KQTRDLITSTLDLLKS 143


>gi|161620234|ref|YP_001594120.1| flagellar basal body rod protein FlgC [Brucella canis ATCC 23365]
 gi|254702574|ref|ZP_05164402.1| flagellar basal body rod protein FlgC [Brucella suis bv. 3 str.
           686]
 gi|260568518|ref|ZP_05838987.1| flagellar basal body rod protein [Brucella suis bv. 4 str. 40]
 gi|261753154|ref|ZP_05996863.1| flagellar basal-body rod protein FlgC [Brucella suis bv. 3 str.
           686]
 gi|161337045|gb|ABX63349.1| flagellar basal-body rod protein FlgC [Brucella canis ATCC 23365]
 gi|260155183|gb|EEW90264.1| flagellar basal body rod protein [Brucella suis bv. 4 str. 40]
 gi|261742907|gb|EEY30833.1| flagellar basal-body rod protein FlgC [Brucella suis bv. 3 str.
           686]
          Length = 140

 Score =  115 bits (288), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 71/136 (52%), Positives = 97/136 (71%), Gaps = 3/136 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
           D L ++  IA SGL+ QS R+ I+SENIANA++T  T  +DPYRRKT+SF   +    G 
Sbjct: 4   DALQSTLKIAASGLSAQSTRLCIVSENIANAQSTARTADTDPYRRKTVSFRTELEQGTGA 63

Query: 62  ---RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
              RV ++G D S F+E++DP HP A+A G VKYPNVN++VE ADMRE NR Y ANLQ +
Sbjct: 64  AEVRVAEVGKDTSPFIEQYDPSHPAADARGYVKYPNVNMVVEMADMREANRSYEANLQVV 123

Query: 119 KQSHDMMTTTLDLLRD 134
           +Q+ ++++ T+DLLR 
Sbjct: 124 RQARELISMTIDLLRS 139


>gi|121602485|ref|YP_989402.1| flagellar basal body rod protein FlgC [Bartonella bacilliformis
           KC583]
 gi|120614662|gb|ABM45263.1| flagellar basal-body rod protein FlgC [Bartonella bacilliformis
           KC583]
          Length = 137

 Score =  115 bits (288), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 68/135 (50%), Positives = 100/135 (74%), Gaps = 3/135 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG---S 58
           D L+ +  ++ +GL  QS R++II+EN+ANA +TG  PG+ PYRRKT+SFE  ++    +
Sbjct: 3   DPLMIAERVSTTGLGAQSTRLRIIAENLANANSTGRAPGAAPYRRKTVSFETALNPYVDA 62

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
            GV VK+IGVD++ F+  ++PGH  A+++G VKYPNVN ++E ADMRE NR Y ANLQ I
Sbjct: 63  QGVHVKRIGVDKAPFIMRYEPGHLAADSNGYVKYPNVNAVIEMADMREANRSYEANLQVI 122

Query: 119 KQSHDMMTTTLDLLR 133
           +Q  D+++ T+DLL+
Sbjct: 123 RQVRDLVSQTIDLLK 137


>gi|261339374|ref|ZP_05967232.1| flagellar basal-body rod protein FlgC [Enterobacter cancerogenus
           ATCC 35316]
 gi|288318175|gb|EFC57113.1| flagellar basal-body rod protein FlgC [Enterobacter cancerogenus
           ATCC 35316]
          Length = 134

 Score =  115 bits (288), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 41/134 (30%), Positives = 69/134 (51%), Gaps = 2/134 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--G 59
             L+    IA S L  QS R+ + + N+ANA +     G     ++ +   +   G+  G
Sbjct: 1   MALLNIFDIAGSALTAQSKRLNVAASNLANADSVAGPDGQPYRAKQVVFQVDAAPGAATG 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GV+V  +   Q+     ++PG+P+A+A+G VK PNV+V+ E  +    +R Y AN++ + 
Sbjct: 61  GVKVSDVVESQAPDKLVYEPGNPLADANGYVKMPNVDVVGEMVNSMSASRSYQANVEVLN 120

Query: 120 QSHDMMTTTLDLLR 133
               MM  TL L +
Sbjct: 121 TVKSMMLKTLTLGQ 134


>gi|85058009|ref|YP_453711.1| flagellar basal body rod protein FlgC [Sodalis glossinidius str.
           'morsitans']
 gi|84778529|dbj|BAE73306.1| flagellar basal-body rod protein FlgC [Sodalis glossinidius str.
           'morsitans']
          Length = 134

 Score =  115 bits (288), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 40/134 (29%), Positives = 67/134 (50%), Gaps = 2/134 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM--HGSG 59
             L +   I+ S L  QS R+ + + N+ANA +     G     ++ +   +       G
Sbjct: 1   MSLFSIFDISGSALMAQSQRLNVSASNMANADSVTGPDGEPYRAKQVVFQLDAALGQPVG 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GVRV ++  D + +   +DPGHP+AN  G ++ PNVN + E  +    +R Y AN++ I 
Sbjct: 61  GVRVSQVVEDPAPWRLVYDPGHPLANDRGYIRMPNVNRVAEMVNTLSASRSYQANVEVIN 120

Query: 120 QSHDMMTTTLDLLR 133
            +  MM  TL + +
Sbjct: 121 SARSMMMKTLAMGQ 134


>gi|114706769|ref|ZP_01439669.1| flagellar basal-body rod protein C [Fulvimarina pelagi HTCC2506]
 gi|114537717|gb|EAU40841.1| flagellar basal-body rod protein C [Fulvimarina pelagi HTCC2506]
          Length = 138

 Score =  115 bits (288), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 69/136 (50%), Positives = 94/136 (69%), Gaps = 3/136 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
           D L++S  IA SG+  QS R++++SEN+ANA TTGDTPG+DPY RKT++F   +    G 
Sbjct: 3   DPLVSSLKIAASGMEAQSTRLRVVSENVANAETTGDTPGADPYVRKTVTFGATLDEVTGA 62

Query: 62  ---RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
              RV  IG D++ F   +DPG+P A+ +G VK PNVN+L E  DMRE NR Y AN+Q I
Sbjct: 63  NLVRVTDIGTDKADFESTYDPGNPAADENGYVKRPNVNMLTEMMDMREANRSYEANIQVI 122

Query: 119 KQSHDMMTTTLDLLRD 134
           KQ+ +++  T+DLLR 
Sbjct: 123 KQAREIINMTIDLLRS 138


>gi|296102910|ref|YP_003613056.1| flagellar basal body rod protein FlgC [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
 gi|295057369|gb|ADF62107.1| flagellar basal body rod protein FlgC [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
          Length = 134

 Score =  115 bits (288), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 41/134 (30%), Positives = 69/134 (51%), Gaps = 2/134 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--G 59
             L+    IA S L  QS R+ + + N+ANA +     G     ++ +   +   G+  G
Sbjct: 1   MALLNIFDIAGSALTAQSKRLNVAASNLANADSVTGPDGQPYRAKQVVFQVDAAPGAATG 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GV+V  +   Q+     ++PG+P+A+A+G VK PNV+V+ E  +    +R Y AN++ + 
Sbjct: 61  GVKVSDVVESQAPDKLVYEPGNPLADANGYVKMPNVDVVGEMVNSMSASRSYQANVEVLN 120

Query: 120 QSHDMMTTTLDLLR 133
               MM  TL L +
Sbjct: 121 TVKSMMLKTLTLGQ 134


>gi|293409440|ref|ZP_06653016.1| flagellar basal-body rod protein FlgC [Escherichia coli B354]
 gi|291469908|gb|EFF12392.1| flagellar basal-body rod protein FlgC [Escherichia coli B354]
          Length = 134

 Score =  115 bits (288), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 41/134 (30%), Positives = 67/134 (50%), Gaps = 2/134 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--G 59
             L+    IA S L  QS R+ + + N+ANA +     G     ++ +       G+  G
Sbjct: 1   MALLNIFDIAGSALTAQSQRLNVAASNLANADSVTGPDGQPYRAKQVVFQVNAAPGAATG 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GV+V  +   Q+     ++PG+P+A+A G VK PNV+V+ E  +    +R Y AN++ + 
Sbjct: 61  GVKVGDVIESQAPDKLVYEPGNPLADAKGYVKMPNVDVVGEMVNTMSASRSYQANVEVLN 120

Query: 120 QSHDMMTTTLDLLR 133
               MM  TL L +
Sbjct: 121 TVKSMMLKTLTLGQ 134


>gi|284041507|ref|YP_003391847.1| flagellar basal-body rod protein FlgC [Conexibacter woesei DSM
           14684]
 gi|283945728|gb|ADB48472.1| flagellar basal-body rod protein FlgC [Conexibacter woesei DSM
           14684]
          Length = 149

 Score =  115 bits (288), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 49/149 (32%), Positives = 72/149 (48%), Gaps = 17/149 (11%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE-------- 53
             L  +  IA SGL  +  RM + +EN+ANA+TT    G    R++ +  +         
Sbjct: 1   MGLFDAIDIAGSGLTAERLRMDVTAENLANAQTTRAADGGPYQRKEVVLQQSGGSSFSTM 60

Query: 54  ---------VMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
                        S GV V  I  DQ+   + +DPGHP A+  G V  PNVN + E  D+
Sbjct: 61  LTGAIGGVRASEASKGVEVAGIVEDQTAQRQVYDPGHPDADPRGYVAMPNVNPVTEMVDL 120

Query: 105 RETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             ++R Y AN+  ++ +  M T TL+LLR
Sbjct: 121 ISSSRSYEANVTAMQSAKQMFTKTLELLR 149


>gi|260466621|ref|ZP_05812809.1| flagellar basal-body rod protein FlgC [Mesorhizobium opportunistum
           WSM2075]
 gi|259029627|gb|EEW30915.1| flagellar basal-body rod protein FlgC [Mesorhizobium opportunistum
           WSM2075]
          Length = 138

 Score =  115 bits (288), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 72/137 (52%), Positives = 94/137 (68%), Gaps = 3/137 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD L A+  +A SGL  QS R++++SEN+ANA++TG TPGSDPYRRKTISF   +  + G
Sbjct: 1   MDALTAALKVAASGLGAQSERLRVVSENLANAQSTGTTPGSDPYRRKTISFVSELDRASG 60

Query: 61  V---RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
                V  I  D S F  EF PG+  A+  G VK PNVNVL+E ADM E NR Y ANLQ 
Sbjct: 61  SSTVEVNSIDRDPSDFPVEFQPGNEAADEKGYVKMPNVNVLIEMADMTEANRSYEANLQV 120

Query: 118 IKQSHDMMTTTLDLLRD 134
           +KQ+ D+++ T+DL+R+
Sbjct: 121 VKQARDLISMTIDLMRN 137


>gi|256158120|ref|ZP_05456038.1| flagellar basal body rod protein FlgC [Brucella ceti M490/95/1]
 gi|265996637|ref|ZP_06109194.1| flagellar basal-body rod protein FlgC [Brucella ceti M490/95/1]
 gi|262550934|gb|EEZ07095.1| flagellar basal-body rod protein FlgC [Brucella ceti M490/95/1]
          Length = 140

 Score =  115 bits (288), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 70/136 (51%), Positives = 97/136 (71%), Gaps = 3/136 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
           D L ++  IA SGL+ QS R++I+SENIANA++T  T  +DPYRRKT+SF   +    G 
Sbjct: 4   DALQSTLKIAASGLSAQSTRLRIVSENIANAQSTARTADTDPYRRKTVSFRTELEQGTGA 63

Query: 62  ---RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
              RV ++G D S F+ ++DP HP A+A G VKYPNVN++VE ADMRE NR Y ANLQ +
Sbjct: 64  AEVRVAEVGKDTSPFIGQYDPSHPAADARGYVKYPNVNMVVEMADMREANRSYEANLQVV 123

Query: 119 KQSHDMMTTTLDLLRD 134
           +Q+ ++++ T+DLLR 
Sbjct: 124 RQARELISMTIDLLRS 139


>gi|118588700|ref|ZP_01546108.1| flagellar basal-body rod protein C [Stappia aggregata IAM 12614]
 gi|118438686|gb|EAV45319.1| flagellar basal-body rod protein C [Stappia aggregata IAM 12614]
          Length = 136

 Score =  115 bits (288), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 62/135 (45%), Positives = 78/135 (57%), Gaps = 3/135 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             LI S  I+ SGL  Q+ RM+II+ENIANA +T  TP   PYRRK  +F+       G 
Sbjct: 1   MDLIKSLFISASGLRAQNGRMRIIAENIANANSTAKTPEELPYRRKIPTFKSHFDREMGA 60

Query: 62  RVK---KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
            +    KI  D + F     PGHP A+A+G V  PNVN L+ET DMRE  R Y ANL  I
Sbjct: 61  DMVELGKIAEDNTDFRSVLMPGHPAADANGYVLQPNVNTLIETTDMREAQRSYEANLNVI 120

Query: 119 KQSHDMMTTTLDLLR 133
             +  M+  T+D+LR
Sbjct: 121 DSTRKMLQRTIDILR 135


>gi|238919257|ref|YP_002932772.1| flagellar basal-body rod protein FlgC, [Edwardsiella ictaluri
           93-146]
 gi|238868826|gb|ACR68537.1| flagellar basal-body rod protein FlgC, putative [Edwardsiella
           ictaluri 93-146]
          Length = 134

 Score =  115 bits (288), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 40/134 (29%), Positives = 68/134 (50%), Gaps = 2/134 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF--EEVMHGSG 59
             L++   I+ S L  QS RM + + N+ANA +     G   + ++ +           G
Sbjct: 1   MALLSIFDISGSALTAQSERMNVAASNMANADSVTGPDGQPYHAKQVVFQVNPAAGEEIG 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GVRV +I  D +     + PG+P+A+A G V+ PNV+V+ E  +    +R Y AN++ + 
Sbjct: 61  GVRVSQIVEDPAPERLVYQPGNPLADAKGYVRMPNVDVVSEMVNSIAASRSYQANVEVLN 120

Query: 120 QSHDMMTTTLDLLR 133
            +  +M  TL L +
Sbjct: 121 TTKSLMMKTLTLGQ 134


>gi|239826611|ref|YP_002949235.1| flagellar basal body rod protein FlgC [Geobacillus sp. WCH70]
 gi|239806904|gb|ACS23969.1| flagellar basal-body rod protein FlgC [Geobacillus sp. WCH70]
          Length = 150

 Score =  115 bits (288), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 47/150 (31%), Positives = 65/150 (43%), Gaps = 18/150 (12%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGD---TPGSDPYRRK----------- 47
             +  S  I  S L  Q  RM +IS N+AN  TT         +PYRRK           
Sbjct: 1   MSIFQSLDITASALTAQRLRMDVISSNMANVDTTHARLVNGQWEPYRRKFVVMEPRQEGF 60

Query: 48  ----TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETAD 103
                 +         GVRV KI  DQ+ F   +DP HP A+ +G V+ PNV+ L E  D
Sbjct: 61  STYLQAAMNSRSSVGNGVRVTKIMEDQTPFKLVYDPSHPDADPNGYVRLPNVDPLKEMVD 120

Query: 104 MRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +    R Y AN+     +  M+   L++ +
Sbjct: 121 LMSATRSYEANVTVFNATKGMLMKALEIGK 150


>gi|168334478|ref|ZP_02692649.1| Flagellar basal body rod protein [Epulopiscium sp. 'N.t. morphotype
           B']
          Length = 153

 Score =  115 bits (288), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 46/153 (30%), Positives = 64/153 (41%), Gaps = 21/153 (13%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH----- 56
               +   IA +GL  Q  R+ +I++N+AN  +T    G    RR  +     M      
Sbjct: 1   MSFFSGMDIAATGLTAQRFRLDVITQNLANINSTRTPDGGPYQRRTVLFESIPMRDAANK 60

Query: 57  ----------------GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVE 100
                            + GV+V  I  D + F   FDP HP AN  G V+ PNV+V+ E
Sbjct: 61  LPDNFHNILNRNLNMYHTSGVQVSGIVEDDTPFPLIFDPTHPDANEEGYVEMPNVDVVTE 120

Query: 101 TADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             +M   +R Y AN+        M T  LDL R
Sbjct: 121 MVNMISASRSYEANVTAFNNLKSMNTKALDLGR 153


>gi|161503737|ref|YP_001570849.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160865084|gb|ABX21707.1| hypothetical protein SARI_01822 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 134

 Score =  115 bits (287), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 40/134 (29%), Positives = 68/134 (50%), Gaps = 2/134 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM--HGSG 59
             L+    IA S L  QS R+ + + N+ANA +     G     ++ +   +      +G
Sbjct: 1   MALLNIFDIAGSALTAQSKRLNVAASNLANADSVTGPDGQPYRAKQVVFQVDAAPGQATG 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GV+V  +   Q+     ++PG+P+A+A+G VK PNV+V+ E  +    +R Y AN++ + 
Sbjct: 61  GVKVASVIESQAPEKLVYEPGNPLADANGYVKMPNVDVVGEMVNTMSASRSYQANVEVLN 120

Query: 120 QSHDMMTTTLDLLR 133
               MM  TL L +
Sbjct: 121 TVKSMMLKTLTLGQ 134


>gi|288958048|ref|YP_003448389.1| flagellar basal-body rod protein [Azospirillum sp. B510]
 gi|288910356|dbj|BAI71845.1| flagellar basal-body rod protein [Azospirillum sp. B510]
          Length = 136

 Score =  115 bits (287), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 63/135 (46%), Positives = 84/135 (62%), Gaps = 3/135 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             L  S  ++ SG+  Q  R+++ISEN+ANA TT +TPG  PYRRKT+ F+  +  +  V
Sbjct: 1   MDLYKSMAVSASGMKAQGTRLKVISENLANASTTAETPGDLPYRRKTVVFKNELDRAMDV 60

Query: 62  ---RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
              RV K+ VD+S F   +DP HP A+A G V  PNVN +VE  DMRE  R Y ANL  I
Sbjct: 61  DKVRVAKVDVDKSDFQRRYDPSHPSADADGYVLMPNVNSVVEAMDMREAQRSYEANLSAI 120

Query: 119 KQSHDMMTTTLDLLR 133
             +  M+T T+D+LR
Sbjct: 121 DTARQMLTRTIDILR 135


>gi|172057890|ref|YP_001814350.1| flagellar basal-body rod protein FlgC [Exiguobacterium sibiricum
           255-15]
 gi|171990411|gb|ACB61333.1| flagellar basal-body rod protein FlgC [Exiguobacterium sibiricum
           255-15]
          Length = 132

 Score =  115 bits (287), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 45/135 (33%), Positives = 67/135 (49%), Gaps = 6/135 (4%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGD---TPGSDPYRRKTISFEEVMHGS 58
             + +  H + +GL  Q  R+  +S NIANA+TT          PY RK    +E     
Sbjct: 1   MSMFSGFHTSATGLTAQRLRLDTVSANIANAQTTRGELVNGEWQPYARKLAVLKET---G 57

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
            GV V +I  DQ  F  E++P HP A+  G VK PNV++L E  DM    R Y AN+  +
Sbjct: 58  SGVTVSEIRKDQEPFKLEYNPNHPDADELGYVKMPNVDLLKEMVDMMGATRSYEANVTAL 117

Query: 119 KQSHDMMTTTLDLLR 133
             +  M+   +++ +
Sbjct: 118 NATKAMLVKAMEIGK 132


>gi|239834444|ref|ZP_04682772.1| flagellar basal-body rod protein FlgC [Ochrobactrum intermedium LMG
           3301]
 gi|239822507|gb|EEQ94076.1| flagellar basal-body rod protein FlgC [Ochrobactrum intermedium LMG
           3301]
          Length = 140

 Score =  115 bits (287), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 68/136 (50%), Positives = 97/136 (71%), Gaps = 3/136 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
           D L ++  IA SGL+ QS R++I+SENIANA++T  T  +DPYRRKT+SF   +    G 
Sbjct: 4   DALQSTLKIAASGLSAQSTRLRIVSENIANAQSTAKTADADPYRRKTVSFRTELEQGTGA 63

Query: 62  ---RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
              R+ ++G D S F+E+++P HP A+  G V+YPNVN++VE ADMRE NR Y ANLQ +
Sbjct: 64  AEVRIAEVGKDTSPFIEQYEPSHPAADERGYVRYPNVNMVVEMADMREANRSYEANLQVV 123

Query: 119 KQSHDMMTTTLDLLRD 134
           KQ+ ++++ T+DLLR 
Sbjct: 124 KQARELISMTIDLLRS 139


>gi|116327145|ref|YP_796865.1| flagellar basal body rod protein FlgC [Leptospira borgpetersenii
           serovar Hardjo-bovis L550]
 gi|116332198|ref|YP_801916.1| flagellar basal body rod protein FlgC [Leptospira borgpetersenii
           serovar Hardjo-bovis JB197]
 gi|116119889|gb|ABJ77932.1| Endoflagellar proximal basal body rod protein [Leptospira
           borgpetersenii serovar Hardjo-bovis L550]
 gi|116125887|gb|ABJ77158.1| Endoflagellar proximal basal body rod protein [Leptospira
           borgpetersenii serovar Hardjo-bovis JB197]
          Length = 153

 Score =  115 bits (287), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 51/152 (33%), Positives = 71/152 (46%), Gaps = 20/152 (13%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE-------- 53
             L +S +I+ +GL+ Q  RM +IS NIAN+ TT +T G  P+RR  +            
Sbjct: 1   MGLFSSINISATGLSAQRLRMDVISNNIANSTTTRNTNGDGPFRRDRVVMTPINLRTRWR 60

Query: 54  --------VMHGSGGVRVKKIGVDQSTFVEEFDPGHPVA----NASGIVKYPNVNVLVET 101
                         GV+V KI  D +     +DP HP A       G V+ PNVN++ E 
Sbjct: 61  SPVYPFGVAPGEGKGVKVMKIEKDMTPLRLVYDPTHPDAIQIGPKKGYVEMPNVNIVTEM 120

Query: 102 ADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            DM   +R Y AN+Q I  S  M    L++ R
Sbjct: 121 TDMISASRSYEANVQMINGSKAMFNKALEIGR 152


>gi|157146228|ref|YP_001453547.1| flagellar basal body rod protein FlgC [Citrobacter koseri ATCC
           BAA-895]
 gi|157083433|gb|ABV13111.1| hypothetical protein CKO_01985 [Citrobacter koseri ATCC BAA-895]
          Length = 134

 Score =  115 bits (287), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 41/134 (30%), Positives = 69/134 (51%), Gaps = 2/134 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--G 59
             L+    IA S L  QS R+ + + N+ANA +     G     ++ +   +   G+  G
Sbjct: 1   MALLNIFDIAGSALTAQSKRLNVAASNLANADSVTGPDGQPYRAKQVVFQVDAAPGAATG 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GV+V  +   Q+     ++PG+P+A+A+G VK PNV+V+ E  +    +R Y AN++ + 
Sbjct: 61  GVKVADVIESQAPDKLVYEPGNPLADANGYVKMPNVDVVGEMVNTMSASRSYQANVEVLN 120

Query: 120 QSHDMMTTTLDLLR 133
               MM  TL L +
Sbjct: 121 TVKSMMLKTLTLGQ 134


>gi|23016627|ref|ZP_00056381.1| COG1558: Flagellar basal body rod protein [Magnetospirillum
           magnetotacticum MS-1]
          Length = 136

 Score =  115 bits (287), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 59/136 (43%), Positives = 82/136 (60%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD L  S  IA SG+ VQS R+++ISEN+AN+ +   TP   PYRRK ++F+  +  + G
Sbjct: 1   MDELSKSTTIAISGMKVQSQRLRLISENLANSDSLAQTPEGLPYRRKVMTFKNELDRATG 60

Query: 61  V---RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
               +V K+  D S F   +DP HP A+  G V  PNVN L+E  DMRE  R Y AN+  
Sbjct: 61  TSLVKVDKVRADSSEFQRRYDPKHPAADRDGYVLAPNVNPLIEMMDMREAQRSYEANMNV 120

Query: 118 IKQSHDMMTTTLDLLR 133
           I  S  +++ T+D+LR
Sbjct: 121 INASRSLLSRTIDMLR 136


>gi|307310148|ref|ZP_07589798.1| flagellar basal-body rod protein FlgC [Escherichia coli W]
 gi|306909866|gb|EFN40360.1| flagellar basal-body rod protein FlgC [Escherichia coli W]
 gi|315060352|gb|ADT74679.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli W]
 gi|320200970|gb|EFW75554.1| Flagellar basal-body rod protein FlgC [Escherichia coli EC4100B]
 gi|323379087|gb|ADX51355.1| flagellar basal-body rod protein FlgC [Escherichia coli KO11]
          Length = 134

 Score =  115 bits (287), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 42/134 (31%), Positives = 67/134 (50%), Gaps = 2/134 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--G 59
             L+    IA S L  QS R+ + + N+ANA +     G     ++ +       G+  G
Sbjct: 1   MALLNIFDIAGSALTAQSQRLNVAASNLANADSVTGPDGQPYRAKQVVFQVNAAPGAATG 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GV+V  +   QS     ++PG+P+A+A G VK PNV+V+ E  +    +R Y AN++ + 
Sbjct: 61  GVKVADVIESQSPDKLVYEPGNPLADAKGYVKMPNVDVVGEMVNTMSASRSYQANVEVLN 120

Query: 120 QSHDMMTTTLDLLR 133
               MM  TL L +
Sbjct: 121 TVKSMMLKTLTLGQ 134


>gi|312876494|ref|ZP_07736477.1| flagellar basal-body rod protein FlgC [Caldicellulosiruptor
           lactoaceticus 6A]
 gi|311796705|gb|EFR13051.1| flagellar basal-body rod protein FlgC [Caldicellulosiruptor
           lactoaceticus 6A]
          Length = 147

 Score =  115 bits (287), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 48/147 (32%), Positives = 74/147 (50%), Gaps = 15/147 (10%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR--------------- 46
             +  + +I++S LA Q  RM +I++NIANA TT    G    R+               
Sbjct: 1   MGMFDAINISSSALAAQRVRMDVIAQNIANANTTRTENGQPYRRKVVVFEERKQSFSDIL 60

Query: 47  KTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
                +      GGVRVK I  D S F + +DP HP A+ +G V YPNV+++ E  +M E
Sbjct: 61  NQKIGQAQASSYGGVRVKAILEDPSPFKKVYDPTHPDADQNGYVNYPNVDIVTEMVNMIE 120

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
            +R Y AN+  +  +  M+T T ++ +
Sbjct: 121 ASRSYEANVTALNITKSMITRTFEIGK 147


>gi|15964413|ref|NP_384766.1| flagellar basal body rod protein FlgC [Sinorhizobium meliloti 1021]
 gi|307311555|ref|ZP_07591196.1| flagellar basal-body rod protein FlgC [Sinorhizobium meliloti
           BL225C]
 gi|307318910|ref|ZP_07598341.1| flagellar basal-body rod protein FlgC [Sinorhizobium meliloti AK83]
 gi|17380478|sp|Q52944|FLGC_RHIME RecName: Full=Flagellar basal-body rod protein flgC
 gi|15073590|emb|CAC45232.1| Flagellar basal-body rod protein [Sinorhizobium meliloti 1021]
 gi|306895324|gb|EFN26079.1| flagellar basal-body rod protein FlgC [Sinorhizobium meliloti AK83]
 gi|306899572|gb|EFN30201.1| flagellar basal-body rod protein FlgC [Sinorhizobium meliloti
           BL225C]
          Length = 139

 Score =  115 bits (287), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 76/136 (55%), Positives = 101/136 (74%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD L ++  ++ SGL  +S R++I+SENIANAR+TGD PG+DP+RRKTISF   +  + G
Sbjct: 1   MDPLTSALKVSASGLQAESTRLRIVSENIANARSTGDAPGADPFRRKTISFAAEVDRASG 60

Query: 61  V---RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
                V+++G D S F  EFDPG+P A+  G+VK PNVN+L+E ADMRE NR Y ANLQT
Sbjct: 61  ASLVEVERLGTDDSDFNIEFDPGNPAADEKGMVKLPNVNILIEMADMREANRAYEANLQT 120

Query: 118 IKQSHDMMTTTLDLLR 133
           IKQS D+++ T+DLLR
Sbjct: 121 IKQSRDLISQTIDLLR 136


>gi|260893877|ref|YP_003239974.1| flagellar basal-body rod protein FlgC [Ammonifex degensii KC4]
 gi|260866018|gb|ACX53124.1| flagellar basal-body rod protein FlgC [Ammonifex degensii KC4]
          Length = 137

 Score =  115 bits (287), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 49/138 (35%), Positives = 70/138 (50%), Gaps = 8/138 (5%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG---- 57
              I    I+ SGL  +  R+ +++ N+AN  TT  TP   PYRR+   F +V+      
Sbjct: 1   MAFIDPFRISGSGLTAERLRLDLVANNLANIDTTR-TPAGGPYRRRVPVFAQVLEARKEG 59

Query: 58  --SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
               GVRV  I  DQS F   +DP HP A  +G V+YPNVNV  E  D+    R Y AN 
Sbjct: 60  MVGMGVRVVAIVEDQSPFKVVYDPNHPDA-QNGYVRYPNVNVADEVVDLIGAARAYEANA 118

Query: 116 QTIKQSHDMMTTTLDLLR 133
             ++ + +M    +++ R
Sbjct: 119 TVLETAKEMARQAIEIGR 136


>gi|294827625|ref|NP_710527.2| flagellar basal body rod protein FlgC [Leptospira interrogans
           serovar Lai str. 56601]
 gi|293385469|gb|AAN47545.2| flagellar basal body rod protein FlgC [Leptospira interrogans
           serovar Lai str. 56601]
          Length = 153

 Score =  115 bits (287), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 49/152 (32%), Positives = 72/152 (47%), Gaps = 20/152 (13%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV------- 54
             L +S +I+ +GL+ Q  RM +IS NIAN+ TT +T G  P+RR  +    +       
Sbjct: 1   MGLFSSINISATGLSAQRLRMDVISNNIANSTTTRNTNGDGPFRRDRVVMTPINLRTKWR 60

Query: 55  ---------MHGSGGVRVKKIGVDQSTFVEEFDPGHPVA----NASGIVKYPNVNVLVET 101
                         GV+V K+  D +     +DP HP +       G V+ PNVN++ E 
Sbjct: 61  SPVYPFGVSPGEGKGVKVMKVEKDMTPLRLVYDPTHPDSIQIGPKKGYVEMPNVNIVTEM 120

Query: 102 ADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            DM   +R Y AN+Q I  S  M    L++ R
Sbjct: 121 TDMISASRSYEANVQMINGSKAMFNKALEIGR 152


>gi|153011526|ref|YP_001372740.1| flagellar basal body rod protein FlgC [Ochrobactrum anthropi ATCC
           49188]
 gi|151563414|gb|ABS16911.1| flagellar basal-body rod protein FlgC [Ochrobactrum anthropi ATCC
           49188]
          Length = 140

 Score =  115 bits (287), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 68/136 (50%), Positives = 98/136 (72%), Gaps = 3/136 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
           D L ++  IA SGL+ QS R++I+SENIANA++T +T  +DPYRRKT+SF   +    G 
Sbjct: 4   DALQSTLKIAASGLSAQSTRLRIVSENIANAQSTAETADADPYRRKTVSFRTELEQGTGA 63

Query: 62  ---RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
              R+ ++G D S F+E+++P HP A+  G V+YPNVN++VE ADMRE NR Y ANLQ +
Sbjct: 64  AEVRIAEVGKDTSPFIEQYEPSHPAADERGYVRYPNVNMVVEMADMREANRSYEANLQVV 123

Query: 119 KQSHDMMTTTLDLLRD 134
           KQ+ ++++ T+DLLR 
Sbjct: 124 KQARELISMTIDLLRS 139


>gi|326204628|ref|ZP_08194484.1| flagellar basal-body rod protein FlgC [Clostridium papyrosolvens
           DSM 2782]
 gi|325985195|gb|EGD46035.1| flagellar basal-body rod protein FlgC [Clostridium papyrosolvens
           DSM 2782]
          Length = 147

 Score =  114 bits (286), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 48/147 (32%), Positives = 73/147 (49%), Gaps = 15/147 (10%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE--------- 52
             + ++  I+ SGL  Q  RM  IS+NIANA TT    G+   RR+ +  E         
Sbjct: 1   MGIFSALDISASGLTAQRVRMDTISQNIANANTTRTADGTPYRRREVVFEERSDSNSFSQ 60

Query: 53  ------EVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
                   ++G  GVRV  I  D + F + +DPGHP A+A G V  PNV+++ E  +M  
Sbjct: 61  ALENASSKLNGGNGVRVSSIVEDPTDFKKVYDPGHPDADAEGYVNMPNVDIVTEMVNMIS 120

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
             R Y AN+ ++  +  M    L++ +
Sbjct: 121 ATRSYEANVTSVNATKSMALKALEIGK 147


>gi|311280019|ref|YP_003942250.1| flagellar basal-body rod protein FlgC [Enterobacter cloacae SCF1]
 gi|308749214|gb|ADO48966.1| flagellar basal-body rod protein FlgC [Enterobacter cloacae SCF1]
          Length = 134

 Score =  114 bits (286), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 39/134 (29%), Positives = 67/134 (50%), Gaps = 2/134 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM--HGSG 59
             L++   +A S L  QS R+ + + N+ANA +     G     ++ +   +      +G
Sbjct: 1   MALLSIFDVAGSALTAQSKRLNVAASNLANADSVTGPDGQPYRAKQVVFQVDAPIGAATG 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GV+V  +   Q+     F PG+P+A+A G V+ PNV+V+ E  +    +R Y AN++ + 
Sbjct: 61  GVKVANVVESQAPDKLVFQPGNPLADAKGYVRMPNVDVVGEMVNTMSASRSYQANVEVLN 120

Query: 120 QSHDMMTTTLDLLR 133
               MM  TL L +
Sbjct: 121 TVKSMMLKTLTLGQ 134


>gi|15644117|ref|NP_229166.1| flagellar basal-body rod protein FlgC [Thermotoga maritima MSB8]
 gi|281412855|ref|YP_003346934.1| flagellar basal-body rod protein FlgC [Thermotoga naphthophila
           RKU-10]
 gi|4981925|gb|AAD36435.1|AE001790_7 flagellar basal-body rod protein FlgC [Thermotoga maritima MSB8]
 gi|281373958|gb|ADA67520.1| flagellar basal-body rod protein FlgC [Thermotoga naphthophila
           RKU-10]
          Length = 140

 Score =  114 bits (286), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 51/140 (36%), Positives = 73/140 (52%), Gaps = 8/140 (5%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG--- 57
           M       +I+ +G++ Q  R++I+S NIANA TT    G  PYRRK   F E +     
Sbjct: 1   MMSEFEIMNISATGMSAQRLRVEIVSTNIANAETTRTETGE-PYRRKVPVFAEYLRRTPN 59

Query: 58  ----SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
               S GV+V KI  D S F   +DP HP A+ +G V+ PNVN++ E  D+    R Y A
Sbjct: 60  GKIESAGVKVVKIEEDPSPFRLVYDPTHPDADENGYVRMPNVNIVREMVDLINAQRAYDA 119

Query: 114 NLQTIKQSHDMMTTTLDLLR 133
           N+     +  M+ + L + R
Sbjct: 120 NVAAFNVTKAMVNSALQIGR 139


>gi|170682563|ref|YP_001744106.1| flagellar basal body rod protein FlgC [Escherichia coli SMS-3-5]
 gi|170520281|gb|ACB18459.1| flagellar basal-body rod protein FlgC [Escherichia coli SMS-3-5]
          Length = 134

 Score =  114 bits (286), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 41/134 (30%), Positives = 67/134 (50%), Gaps = 2/134 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--G 59
             L+    IA S L  QS R+ + + N+ANA +     G     ++ +       G+  G
Sbjct: 1   MALLNIFDIAGSALTAQSQRLNVAASNLANADSLTGPDGQPYRAKQVVFQVNAAPGAATG 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GV+V  +   Q+     ++PG+P+A+A G VK PNV+V+ E  +    +R Y AN++ + 
Sbjct: 61  GVKVADVIESQAPDKLVYEPGNPLADAKGYVKMPNVDVVGEMVNTMSASRSYQANVEVLN 120

Query: 120 QSHDMMTTTLDLLR 133
               MM  TL L +
Sbjct: 121 TVKSMMLKTLTLGQ 134


>gi|325291941|ref|YP_004277805.1| flagellar basal body rod protein FlgC [Agrobacterium sp. H13-3]
 gi|325059794|gb|ADY63485.1| flagellar basal body rod protein FlgC [Agrobacterium sp. H13-3]
          Length = 139

 Score =  114 bits (286), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 82/136 (60%), Positives = 107/136 (78%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD L A++ IA SGL VQS R++I+SENIANAR+TGDTPG+DPYRRKT++F   +    G
Sbjct: 1   MDPLSAASKIAGSGLEVQSTRLRIVSENIANARSTGDTPGADPYRRKTVTFGSELDRVSG 60

Query: 61  VR---VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           V+   VKK+GVD+  FV E+DPG+P A+ SG+VK PNVNVL+E ADMRE NR Y ANLQ 
Sbjct: 61  VQRVTVKKLGVDRGDFVHEYDPGNPAADTSGMVKMPNVNVLIEMADMREANRSYDANLQV 120

Query: 118 IKQSHDMMTTTLDLLR 133
           I+Q+ D++ +T+DLL+
Sbjct: 121 IRQTRDLVASTIDLLK 136


>gi|17989433|ref|NP_542066.1| flagellar basal body rod protein FlgC [Brucella melitensis bv. 1
           str. 16M]
 gi|62317101|ref|YP_222954.1| flagellar basal body rod protein FlgC [Brucella abortus bv. 1 str.
           9-941]
 gi|83269093|ref|YP_418384.1| flagellar basal body rod protein FlgC [Brucella melitensis biovar
           Abortus 2308]
 gi|163844344|ref|YP_001621999.1| flagellar basal body rod protein FlgC [Brucella suis ATCC 23445]
 gi|189022366|ref|YP_001932107.1| flagellar basal body rod protein FlgC [Brucella abortus S19]
 gi|225628623|ref|ZP_03786657.1| flagellar basal-body rod protein FlgC [Brucella ceti str. Cudo]
 gi|225686010|ref|YP_002733982.1| flagellar basal body rod protein FlgC [Brucella melitensis ATCC
           23457]
 gi|237816663|ref|ZP_04595655.1| flagellar basal-body rod protein FlgC [Brucella abortus str. 2308
           A]
 gi|254691414|ref|ZP_05154668.1| flagellar basal body rod protein FlgC [Brucella abortus bv. 6 str.
           870]
 gi|254695288|ref|ZP_05157116.1| flagellar basal body rod protein FlgC [Brucella abortus bv. 3 str.
           Tulya]
 gi|254698386|ref|ZP_05160214.1| flagellar basal body rod protein FlgC [Brucella abortus bv. 2 str.
           86/8/59]
 gi|254699459|ref|ZP_05161287.1| flagellar basal body rod protein FlgC [Brucella suis bv. 5 str.
           513]
 gi|254706294|ref|ZP_05168122.1| flagellar basal body rod protein FlgC [Brucella pinnipedialis
           M163/99/10]
 gi|254711412|ref|ZP_05173223.1| flagellar basal body rod protein FlgC [Brucella pinnipedialis
           B2/94]
 gi|254712011|ref|ZP_05173822.1| flagellar basal body rod protein FlgC [Brucella ceti M644/93/1]
 gi|254715080|ref|ZP_05176891.1| flagellar basal body rod protein FlgC [Brucella ceti M13/05/1]
 gi|256014940|ref|YP_003104949.1| flagellar basal body rod protein [Brucella microti CCM 4915]
 gi|256029958|ref|ZP_05443572.1| flagellar basal body rod protein FlgC [Brucella pinnipedialis
           M292/94/1]
 gi|256043071|ref|ZP_05446015.1| flagellar basal body rod protein FlgC [Brucella melitensis bv. 1
           str. Rev.1]
 gi|256059610|ref|ZP_05449808.1| flagellar basal body rod protein FlgC [Brucella neotomae 5K33]
 gi|256111945|ref|ZP_05452896.1| flagellar basal body rod protein FlgC [Brucella melitensis bv. 3
           str. Ether]
 gi|256252926|ref|ZP_05458462.1| flagellar basal body rod protein FlgC [Brucella ceti B1/94]
 gi|256256600|ref|ZP_05462136.1| flagellar basal body rod protein FlgC [Brucella abortus bv. 9 str.
           C68]
 gi|256262867|ref|ZP_05465399.1| flagellar basal body rod protein [Brucella melitensis bv. 2 str.
           63/9]
 gi|260544339|ref|ZP_05820160.1| flagellar basal body rod protein [Brucella abortus NCTC 8038]
 gi|260564301|ref|ZP_05834786.1| flagellar basal body rod protein [Brucella melitensis bv. 1 str.
           16M]
 gi|260757028|ref|ZP_05869376.1| flagellar basal-body rod protein FlgC [Brucella abortus bv. 6 str.
           870]
 gi|260762844|ref|ZP_05875176.1| flagellar basal-body rod protein FlgC [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260882838|ref|ZP_05894452.1| flagellar basal-body rod protein FlgC [Brucella abortus bv. 9 str.
           C68]
 gi|261215657|ref|ZP_05929938.1| flagellar basal-body rod protein FlgC [Brucella abortus bv. 3 str.
           Tulya]
 gi|261216790|ref|ZP_05931071.1| flagellar basal-body rod protein FlgC [Brucella ceti M13/05/1]
 gi|261220017|ref|ZP_05934298.1| flagellar basal-body rod protein FlgC [Brucella ceti B1/94]
 gi|261313738|ref|ZP_05952935.1| flagellar basal-body rod protein FlgC [Brucella pinnipedialis
           M163/99/10]
 gi|261319020|ref|ZP_05958217.1| flagellar basal-body rod protein FlgC [Brucella pinnipedialis
           B2/94]
 gi|261319657|ref|ZP_05958854.1| flagellar basal-body rod protein FlgC [Brucella ceti M644/93/1]
 gi|261323579|ref|ZP_05962776.1| flagellar basal-body rod protein FlgC [Brucella neotomae 5K33]
 gi|261749910|ref|ZP_05993619.1| flagellar basal-body rod protein FlgC [Brucella suis bv. 5 str.
           513]
 gi|265986977|ref|ZP_06099534.1| flagellar basal-body rod protein FlgC [Brucella pinnipedialis
           M292/94/1]
 gi|265989509|ref|ZP_06102066.1| flagellar basal-body rod protein FlgC [Brucella melitensis bv. 1
           str. Rev.1]
 gi|265993392|ref|ZP_06105949.1| flagellar basal-body rod protein FlgC [Brucella melitensis bv. 3
           str. Ether]
 gi|294853173|ref|ZP_06793845.1| flagellar basal-body rod protein FlgC [Brucella sp. NVSL 07-0026]
 gi|297249956|ref|ZP_06933657.1| flagellar basal-body rod protein FlgC [Brucella abortus bv. 5 str.
           B3196]
 gi|17985310|gb|AAL54330.1| flagellar basal-body rod protein flgc [Brucella melitensis bv. 1
           str. 16M]
 gi|62197294|gb|AAX75593.1| FlgC, flagellar basal-body rod rotein FlgC [Brucella abortus bv. 1
           str. 9-941]
 gi|82939367|emb|CAJ12315.1| Flagellar basal body rod protein:Flagellar basal-body rod protein
           FlgC [Brucella melitensis biovar Abortus 2308]
 gi|163675067|gb|ABY39177.1| flagellar basal-body rod protein FlgC [Brucella suis ATCC 23445]
 gi|189020940|gb|ACD73661.1| Flagellar basal body rod protein [Brucella abortus S19]
 gi|225616469|gb|EEH13517.1| flagellar basal-body rod protein FlgC [Brucella ceti str. Cudo]
 gi|225642115|gb|ACO02028.1| flagellar basal-body rod protein FlgC [Brucella melitensis ATCC
           23457]
 gi|237787476|gb|EEP61692.1| flagellar basal-body rod protein FlgC [Brucella abortus str. 2308
           A]
 gi|255997600|gb|ACU49287.1| flagellar basal body rod protein [Brucella microti CCM 4915]
 gi|260097610|gb|EEW81484.1| flagellar basal body rod protein [Brucella abortus NCTC 8038]
 gi|260151944|gb|EEW87037.1| flagellar basal body rod protein [Brucella melitensis bv. 1 str.
           16M]
 gi|260673265|gb|EEX60086.1| flagellar basal-body rod protein FlgC [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260677136|gb|EEX63957.1| flagellar basal-body rod protein FlgC [Brucella abortus bv. 6 str.
           870]
 gi|260872366|gb|EEX79435.1| flagellar basal-body rod protein FlgC [Brucella abortus bv. 9 str.
           C68]
 gi|260917264|gb|EEX84125.1| flagellar basal-body rod protein FlgC [Brucella abortus bv. 3 str.
           Tulya]
 gi|260918601|gb|EEX85254.1| flagellar basal-body rod protein FlgC [Brucella ceti B1/94]
 gi|260921879|gb|EEX88447.1| flagellar basal-body rod protein FlgC [Brucella ceti M13/05/1]
 gi|261292347|gb|EEX95843.1| flagellar basal-body rod protein FlgC [Brucella ceti M644/93/1]
 gi|261298243|gb|EEY01740.1| flagellar basal-body rod protein FlgC [Brucella pinnipedialis
           B2/94]
 gi|261299559|gb|EEY03056.1| flagellar basal-body rod protein FlgC [Brucella neotomae 5K33]
 gi|261302764|gb|EEY06261.1| flagellar basal-body rod protein FlgC [Brucella pinnipedialis
           M163/99/10]
 gi|261739663|gb|EEY27589.1| flagellar basal-body rod protein FlgC [Brucella suis bv. 5 str.
           513]
 gi|262764262|gb|EEZ10294.1| flagellar basal-body rod protein FlgC [Brucella melitensis bv. 3
           str. Ether]
 gi|263000178|gb|EEZ12868.1| flagellar basal-body rod protein FlgC [Brucella melitensis bv. 1
           str. Rev.1]
 gi|263092702|gb|EEZ16911.1| flagellar basal body rod protein [Brucella melitensis bv. 2 str.
           63/9]
 gi|264659174|gb|EEZ29435.1| flagellar basal-body rod protein FlgC [Brucella pinnipedialis
           M292/94/1]
 gi|294818828|gb|EFG35828.1| flagellar basal-body rod protein FlgC [Brucella sp. NVSL 07-0026]
 gi|297173825|gb|EFH33189.1| flagellar basal-body rod protein FlgC [Brucella abortus bv. 5 str.
           B3196]
 gi|326410333|gb|ADZ67397.1| flagellar basal body rod protein FlgC [Brucella melitensis M28]
 gi|326553625|gb|ADZ88264.1| flagellar basal body rod protein FlgC [Brucella melitensis M5-90]
          Length = 140

 Score =  114 bits (286), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 71/136 (52%), Positives = 98/136 (72%), Gaps = 3/136 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
           D L ++  IA SGL+ QS R++I+SENIANA++T  T  +DPYRRKT+SF   +    G 
Sbjct: 4   DALQSTLKIAASGLSAQSTRLRIVSENIANAQSTARTADTDPYRRKTVSFRTELEQGTGA 63

Query: 62  ---RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
              RV ++G D S F+E++DP HP A+A G VKYPNVN++VE ADMRE NR Y ANLQ +
Sbjct: 64  AEVRVAEVGKDTSPFIEQYDPSHPAADARGYVKYPNVNMVVEMADMREANRSYEANLQVV 123

Query: 119 KQSHDMMTTTLDLLRD 134
           +Q+ ++++ T+DLLR 
Sbjct: 124 RQARELISMTIDLLRS 139


>gi|311030132|ref|ZP_07708222.1| flagellar basal body rod protein FlgC [Bacillus sp. m3-13]
          Length = 150

 Score =  114 bits (286), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 46/150 (30%), Positives = 67/150 (44%), Gaps = 18/150 (12%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGD---TPGSDPYRRKTISFEEVMHGS 58
             +  S +I++S L  Q  RM +IS N+AN  +T         +PYRRK +      +  
Sbjct: 1   MSMFKSMNISSSALTAQRLRMDVISSNMANVDSTRGEYRNGQWEPYRRKLVETAPKENSF 60

Query: 59  GGV---------------RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETAD 103
                             +V +I  D + F   FDP HP AN  G V+ PNV+ L E  D
Sbjct: 61  QSYLQKASGNGSGFGSGVKVTRIKEDDAPFRVMFDPEHPDANEDGYVELPNVDPLKEMVD 120

Query: 104 MRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +   +R Y AN+     S  +M  TL+L +
Sbjct: 121 LMSASRSYEANVTVFNASKGIMMKTLELGK 150


>gi|188997545|ref|YP_001931796.1| flagellar basal-body rod protein FlgC [Sulfurihydrogenibium sp.
           YO3AOP1]
 gi|188932612|gb|ACD67242.1| flagellar basal-body rod protein FlgC [Sulfurihydrogenibium sp.
           YO3AOP1]
          Length = 136

 Score =  114 bits (286), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 47/135 (34%), Positives = 67/135 (49%), Gaps = 6/135 (4%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV-- 61
           L     I+ SG+  +  R+ + + N+AN  +T    G  PYRRK   FE V+     +  
Sbjct: 2   LFKGLEISVSGMQAERVRIDLAASNLANVNSTHTENGQ-PYRRKVPVFEAVLDAQSQIPV 60

Query: 62  ---RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
              RVK I  D S F  +FDP +P A   G V+ PNV+ + E  DM    R Y ANL   
Sbjct: 61  YKVRVKDIQEDPSPFKLKFDPNNPDAGPDGYVRLPNVDPIREMVDMMTAMRTYEANLTAF 120

Query: 119 KQSHDMMTTTLDLLR 133
               DM+  +L+++R
Sbjct: 121 NTHKDMLIKSLEIIR 135


>gi|306846280|ref|ZP_07478841.1| flagellar basal-body rod protein FlgC [Brucella sp. BO1]
 gi|306273275|gb|EFM55144.1| flagellar basal-body rod protein FlgC [Brucella sp. BO1]
          Length = 140

 Score =  114 bits (286), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 72/136 (52%), Positives = 98/136 (72%), Gaps = 3/136 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
           D L ++  IA SGL+ QS R++IISENIANA++T  T  +DPYRRKT+SF   +    G 
Sbjct: 4   DALQSTLKIAASGLSAQSTRLRIISENIANAQSTARTADADPYRRKTVSFRTELEQGTGA 63

Query: 62  ---RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
              RV ++G D S F+E++DP HP A+A G VKYPNVN++VE ADMRE NR Y ANLQ +
Sbjct: 64  AEVRVAEVGKDTSPFIEQYDPSHPAADARGYVKYPNVNMVVEMADMREANRSYEANLQVV 123

Query: 119 KQSHDMMTTTLDLLRD 134
           +Q+ ++++ T+DLLR 
Sbjct: 124 RQARELISMTIDLLRS 139


>gi|146296278|ref|YP_001180049.1| flagellar basal-body rod protein FlgC [Caldicellulosiruptor
           saccharolyticus DSM 8903]
 gi|145409854|gb|ABP66858.1| flagellar basal-body rod protein FlgC [Caldicellulosiruptor
           saccharolyticus DSM 8903]
          Length = 146

 Score =  114 bits (286), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 44/146 (30%), Positives = 71/146 (48%), Gaps = 14/146 (9%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF---------- 51
             +  + +I+ S L  Q  RM +I++NIANA TT    G+   R+  +            
Sbjct: 1   MGMFDAINISASALHAQRVRMDVIAQNIANANTTRTEDGTPYRRKIVVFEERKQSFGDIL 60

Query: 52  ----EEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                       GVRVK I  D S F + +DP HP ++ +G V YPNV+++ E  +M E 
Sbjct: 61  NEKLNASSDTYAGVRVKAIIEDTSPFKKVYDPTHPDSDQNGYVNYPNVDIVTEMVNMIEA 120

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
           +R Y AN+  +  +  M+T   ++ +
Sbjct: 121 SRAYEANVTAMNITKSMITRIFEIGK 146


>gi|186477695|ref|YP_001859165.1| flagellar basal body rod protein FlgC [Burkholderia phymatum
           STM815]
 gi|184194154|gb|ACC72119.1| flagellar basal-body rod protein FlgC [Burkholderia phymatum
           STM815]
          Length = 141

 Score =  114 bits (286), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 38/140 (27%), Positives = 71/140 (50%), Gaps = 8/140 (5%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM----- 55
           M  L+   ++A S ++ QS R+ + + N+ANA +T    G     ++ +     +     
Sbjct: 1   MPSLMNIFNVAGSAMSAQSQRLNVTASNLANADSTTGPDGKPYKAKQVVFAVNPIGGART 60

Query: 56  ---HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
                 GGV+V  +  D +     ++PG+P A+A+G V+ PNV+ + E  +M   +R Y 
Sbjct: 61  GSGQQVGGVQVTGVIDDPTPMKTSYEPGNPAADANGYVQLPNVDPVQEMVNMISASRSYQ 120

Query: 113 ANLQTIKQSHDMMTTTLDLL 132
           AN++T+  +  +M  TL + 
Sbjct: 121 ANVETLNTAKQLMLKTLTIG 140


>gi|134297200|ref|YP_001120935.1| flagellar basal body rod protein FlgC [Burkholderia vietnamiensis
           G4]
 gi|134140357|gb|ABO56100.1| flagellar basal-body rod protein FlgC [Burkholderia vietnamiensis
           G4]
          Length = 141

 Score =  114 bits (286), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 42/140 (30%), Positives = 71/140 (50%), Gaps = 8/140 (5%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM----- 55
           M  L+    +A S L+ QS R+ + + N+ANA +     G     ++ +   + +     
Sbjct: 1   MPSLMNIFGVAGSALSAQSQRLNVTASNLANADSATGPDGKPYKAKQVVFATDPLGGART 60

Query: 56  ---HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
               G GGVRV K+  D S     +DP +P A+A+G V+ PNV+ + E  +M   +R Y 
Sbjct: 61  ASGQGVGGVRVTKVVDDPSPMKSTYDPANPAADANGYVQMPNVDPVQEMVNMISASRSYQ 120

Query: 113 ANLQTIKQSHDMMTTTLDLL 132
           AN++T+  +  +M  TL + 
Sbjct: 121 ANVETLNTAKTLMLKTLTIG 140


>gi|312135856|ref|YP_004003194.1| flagellar basal-body rod protein flgc [Caldicellulosiruptor
           owensensis OL]
 gi|311775907|gb|ADQ05394.1| flagellar basal-body rod protein FlgC [Caldicellulosiruptor
           owensensis OL]
          Length = 145

 Score =  114 bits (286), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 49/145 (33%), Positives = 76/145 (52%), Gaps = 15/145 (10%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS----- 58
           +  + +I++S L  Q  RM +I++NIANA TT    G    R+  +  E   + S     
Sbjct: 1   MFDAINISSSALTAQRVRMDVIAQNIANANTTRTENGQPYRRKIVVFEERKQNFSQILNQ 60

Query: 59  ----------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                     GGVRVK I  D S F + +DP HP A+ +G V YPNV+++ E  +M E +
Sbjct: 61  KIEQIQASSSGGVRVKAILEDPSPFKKVYDPTHPDADQNGYVNYPNVDIVTEMVNMIEAS 120

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R Y AN+  +  +  M+T T ++ +
Sbjct: 121 RSYEANVTALNITKSMITRTFEIGK 145


>gi|304397202|ref|ZP_07379081.1| flagellar basal-body rod protein FlgC [Pantoea sp. aB]
 gi|304355351|gb|EFM19719.1| flagellar basal-body rod protein FlgC [Pantoea sp. aB]
          Length = 134

 Score =  114 bits (285), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 44/134 (32%), Positives = 70/134 (52%), Gaps = 2/134 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--G 59
             L+    IA S +  QS R+ + + N+ANA +     G     ++ +   +   GS  G
Sbjct: 1   MALLNIFDIAGSAMTAQSQRLNVSASNLANADSVTGPDGKPYVAKQVVFQTDAAPGSATG 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GV+V KI  D +     +DPG+P+A+A G VK PNV+V+ E+ +    +R Y AN++ + 
Sbjct: 61  GVKVAKIVDDPTPAKLVYDPGNPMADAKGYVKMPNVDVVSESVNTMSASRSYQANVEVLN 120

Query: 120 QSHDMMTTTLDLLR 133
               MM  TL L +
Sbjct: 121 TVKSMMMKTLTLGQ 134


>gi|82777311|ref|YP_403660.1| flagellar basal body rod protein FlgC [Shigella dysenteriae Sd197]
 gi|309788141|ref|ZP_07682747.1| flagellar basal-body rod protein FlgC [Shigella dysenteriae 1617]
 gi|81241459|gb|ABB62169.1| cell-proximal portion of basal-body rod [Shigella dysenteriae
           Sd197]
 gi|308923993|gb|EFP69494.1| flagellar basal-body rod protein FlgC [Shigella dysenteriae 1617]
          Length = 134

 Score =  114 bits (285), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 42/134 (31%), Positives = 67/134 (50%), Gaps = 2/134 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--G 59
             L+    IA S L  QS R+ + + N+ANA +     G     ++ +       G+  G
Sbjct: 1   MALLNIFDIAGSALTAQSQRLNVAASNLANADSVTGPDGQPYRAKQVVFQVNSAPGAATG 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GV+V  I   Q+     ++PG+P+A+A G VK PNV+V+ E  +    +R Y AN++ + 
Sbjct: 61  GVKVADIIESQAPDKLVYEPGNPLADAKGYVKMPNVDVVGEMVNTMSASRSYQANVEVLN 120

Query: 120 QSHDMMTTTLDLLR 133
               MM  TL L +
Sbjct: 121 TVKSMMLKTLTLGQ 134


>gi|154250382|ref|YP_001411207.1| flagellar basal-body rod protein FlgC [Fervidobacterium nodosum
           Rt17-B1]
 gi|154154318|gb|ABS61550.1| flagellar basal-body rod protein FlgC [Fervidobacterium nodosum
           Rt17-B1]
          Length = 138

 Score =  114 bits (285), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 54/139 (38%), Positives = 74/139 (53%), Gaps = 7/139 (5%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM----- 55
           M       +I+ +GL+ Q  R+++IS NIAN+ TT    G  PYRRK   F+EV+     
Sbjct: 1   MQSEFNIMNISATGLSAQRFRIEVISTNIANSETTRTENG-GPYRRKVPVFQEVLRNIKG 59

Query: 56  -HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
              +GGV VK I  D S +   +DP HP A+ +G VK PNVN++ E  DM    R Y AN
Sbjct: 60  NQENGGVMVKSIYEDPSEYRIVYDPTHPDADENGYVKLPNVNIVREMVDMINAQRAYEAN 119

Query: 115 LQTIKQSHDMMTTTLDLLR 133
              I  +  M+   L + R
Sbjct: 120 ATAINTTKAMINAALQIGR 138


>gi|15801191|ref|NP_287208.1| flagellar basal body rod protein FlgC [Escherichia coli O157:H7
           EDL933]
 gi|15830706|ref|NP_309479.1| flagellar basal body rod protein FlgC [Escherichia coli O157:H7
           str. Sakai]
 gi|16129037|ref|NP_415592.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli str. K-12 substr. MG1655]
 gi|26247214|ref|NP_753254.1| flagellar basal body rod protein FlgC [Escherichia coli CFT073]
 gi|74311636|ref|YP_310055.1| flagellar basal body rod protein FlgC [Shigella sonnei Ss046]
 gi|82544460|ref|YP_408407.1| flagellar basal body rod protein FlgC [Shigella boydii Sb227]
 gi|89107920|ref|AP_001700.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli str. K-12 substr. W3110]
 gi|91210226|ref|YP_540212.1| flagellar basal body rod protein FlgC [Escherichia coli UTI89]
 gi|110641250|ref|YP_668980.1| flagellar basal body rod protein FlgC [Escherichia coli 536]
 gi|117623260|ref|YP_852173.1| flagellar basal body rod protein FlgC [Escherichia coli APEC O1]
 gi|157158527|ref|YP_001462308.1| flagellar basal body rod protein FlgC [Escherichia coli E24377A]
 gi|157160601|ref|YP_001457919.1| flagellar basal body rod protein FlgC [Escherichia coli HS]
 gi|168747150|ref|ZP_02772172.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. EC4113]
 gi|168758634|ref|ZP_02783641.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. EC4401]
 gi|168764486|ref|ZP_02789493.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. EC4501]
 gi|168767733|ref|ZP_02792740.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. EC4486]
 gi|168773919|ref|ZP_02798926.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. EC4196]
 gi|168783604|ref|ZP_02808611.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. EC4076]
 gi|168790009|ref|ZP_02815016.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. EC869]
 gi|168802019|ref|ZP_02827026.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. EC508]
 gi|170020530|ref|YP_001725484.1| flagellar basal body rod protein FlgC [Escherichia coli ATCC 8739]
 gi|170080725|ref|YP_001730045.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli str. K-12 substr. DH10B]
 gi|187733039|ref|YP_001880754.1| flagellar basal body rod protein FlgC [Shigella boydii CDC 3083-94]
 gi|188493209|ref|ZP_03000479.1| flagellar basal-body rod protein FlgC [Escherichia coli 53638]
 gi|191168455|ref|ZP_03030243.1| flagellar basal-body rod protein FlgC [Escherichia coli B7A]
 gi|191172415|ref|ZP_03033956.1| flagellar basal-body rod protein FlgC [Escherichia coli F11]
 gi|193064524|ref|ZP_03045604.1| flagellar basal-body rod protein FlgC [Escherichia coli E22]
 gi|194428485|ref|ZP_03061025.1| flagellar basal-body rod protein FlgC [Escherichia coli B171]
 gi|194437997|ref|ZP_03070090.1| flagellar basal-body rod protein FlgC [Escherichia coli 101-1]
 gi|195935464|ref|ZP_03080846.1| flagellar basal body rod protein FlgC [Escherichia coli O157:H7
           str. EC4024]
 gi|208806183|ref|ZP_03248520.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. EC4206]
 gi|208816163|ref|ZP_03257342.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. EC4045]
 gi|208822529|ref|ZP_03262848.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. EC4042]
 gi|209400948|ref|YP_002269920.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. EC4115]
 gi|209918328|ref|YP_002292412.1| flagellar basal body rod protein FlgC [Escherichia coli SE11]
 gi|215486283|ref|YP_002328714.1| flagellar basal body rod protein FlgC [Escherichia coli O127:H6
           str. E2348/69]
 gi|217328457|ref|ZP_03444539.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. TW14588]
 gi|218553653|ref|YP_002386566.1| flagellar basal body rod protein FlgC [Escherichia coli IAI1]
 gi|218557956|ref|YP_002390869.1| flagellar basal body rod protein FlgC [Escherichia coli S88]
 gi|218689027|ref|YP_002397239.1| flagellar basal body rod protein FlgC [Escherichia coli ED1a]
 gi|218694608|ref|YP_002402275.1| flagellar basal body rod protein FlgC [Escherichia coli 55989]
 gi|218700423|ref|YP_002408052.1| flagellar basal body rod protein FlgC [Escherichia coli IAI39]
 gi|218704482|ref|YP_002412001.1| flagellar basal body rod protein FlgC [Escherichia coli UMN026]
 gi|227886568|ref|ZP_04004373.1| flagellar basal body rod protein FlgC [Escherichia coli 83972]
 gi|237706940|ref|ZP_04537421.1| flagellar rod protein FlgC [Escherichia sp. 3_2_53FAA]
 gi|238900328|ref|YP_002926124.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli BW2952]
 gi|253773902|ref|YP_003036733.1| flagellar basal body rod protein FlgC [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254161180|ref|YP_003044288.1| flagellar basal body rod protein FlgC [Escherichia coli B str.
           REL606]
 gi|254792456|ref|YP_003077293.1| flagellar basal body rod protein FlgC [Escherichia coli O157:H7
           str. TW14359]
 gi|256018669|ref|ZP_05432534.1| flagellar basal body rod protein FlgC [Shigella sp. D9]
 gi|256023228|ref|ZP_05437093.1| flagellar basal body rod protein FlgC [Escherichia sp. 4_1_40B]
 gi|260843314|ref|YP_003221092.1| flagellar component FlgC of cell-proximal portion of basal-body rod
           [Escherichia coli O103:H2 str. 12009]
 gi|260854557|ref|YP_003228448.1| flagellar component FlgC of cell-proximal portion of basal-body rod
           [Escherichia coli O26:H11 str. 11368]
 gi|260867437|ref|YP_003233839.1| flagellar component FlgC of cell-proximal portion of basal-body rod
           [Escherichia coli O111:H- str. 11128]
 gi|261227021|ref|ZP_05941302.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli O157:H7 str. FRIK2000]
 gi|261256255|ref|ZP_05948788.1| flagellar component FlgC of cell-proximal portion of basal-body rod
           [Escherichia coli O157:H7 str. FRIK966]
 gi|291282094|ref|YP_003498912.1| Cell-proximal portion of basal-body rod [Escherichia coli O55:H7
           str. CB9615]
 gi|293404358|ref|ZP_06648352.1| flgC [Escherichia coli FVEC1412]
 gi|293414369|ref|ZP_06657018.1| flagellar basal-body rod protein FlgC [Escherichia coli B185]
 gi|293433364|ref|ZP_06661792.1| flagellar basal-body rod protein FlgC [Escherichia coli B088]
 gi|298380138|ref|ZP_06989743.1| flagellar basal-body rod protein FlgC [Escherichia coli FVEC1302]
 gi|300816776|ref|ZP_07096996.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 107-1]
 gi|300821145|ref|ZP_07101294.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 119-7]
 gi|300899593|ref|ZP_07117832.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 198-1]
 gi|300902465|ref|ZP_07120447.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 84-1]
 gi|300918676|ref|ZP_07135257.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 115-1]
 gi|300922600|ref|ZP_07138700.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 182-1]
 gi|300928374|ref|ZP_07143908.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 187-1]
 gi|300938639|ref|ZP_07153368.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 21-1]
 gi|300950169|ref|ZP_07164114.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 116-1]
 gi|300954386|ref|ZP_07166840.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 175-1]
 gi|300974378|ref|ZP_07172590.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 45-1]
 gi|300982623|ref|ZP_07176207.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 200-1]
 gi|301023261|ref|ZP_07187058.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 69-1]
 gi|301029711|ref|ZP_07192765.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 196-1]
 gi|301051142|ref|ZP_07197972.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 185-1]
 gi|301304987|ref|ZP_07211089.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 124-1]
 gi|301328556|ref|ZP_07221617.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 78-1]
 gi|301644986|ref|ZP_07244952.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 146-1]
 gi|306814077|ref|ZP_07448250.1| flagellar basal body rod protein FlgC [Escherichia coli NC101]
 gi|307137709|ref|ZP_07497065.1| flagellar basal body rod protein FlgC [Escherichia coli H736]
 gi|309798068|ref|ZP_07692443.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 145-7]
 gi|312968852|ref|ZP_07783059.1| flagellar basal-body rod protein FlgC [Escherichia coli 2362-75]
 gi|312971211|ref|ZP_07785389.1| flagellar basal-body rod protein FlgC [Escherichia coli 1827-70]
 gi|331641618|ref|ZP_08342753.1| flagellar basal-body rod protein FlgC [Escherichia coli H736]
 gi|331646332|ref|ZP_08347435.1| flagellar basal-body rod protein FlgC [Escherichia coli M605]
 gi|331652127|ref|ZP_08353146.1| flagellar basal-body rod protein FlgC [Escherichia coli M718]
 gi|331657136|ref|ZP_08358098.1| flagellar basal-body rod protein FlgC [Escherichia coli TA206]
 gi|331662480|ref|ZP_08363403.1| flagellar basal-body rod protein FlgC [Escherichia coli TA143]
 gi|331667474|ref|ZP_08368338.1| flagellar basal-body rod protein FlgC [Escherichia coli TA271]
 gi|331672594|ref|ZP_08373383.1| flagellar basal-body rod protein FlgC [Escherichia coli TA280]
 gi|331676865|ref|ZP_08377561.1| flagellar basal-body rod protein FlgC [Escherichia coli H591]
 gi|331682576|ref|ZP_08383195.1| flagellar basal-body rod protein FlgC [Escherichia coli H299]
 gi|332279738|ref|ZP_08392151.1| flagellar rod protein FlgC [Shigella sp. D9]
 gi|78100011|sp|P0ABX4|FLGC_ECO57 RecName: Full=Flagellar basal-body rod protein flgC; AltName:
           Full=Putative proximal rod protein
 gi|78100012|sp|P0ABX3|FLGC_ECOL6 RecName: Full=Flagellar basal-body rod protein flgC; AltName:
           Full=Putative proximal rod protein
 gi|78100013|sp|P0ABX2|FLGC_ECOLI RecName: Full=Flagellar basal-body rod protein flgC; AltName:
           Full=Putative proximal rod protein
 gi|12514612|gb|AAG55820.1|AE005317_9 flagellar biosynthesis, cell-proximal portion of basal-body rod
           [Escherichia coli O157:H7 str. EDL933]
 gi|26107615|gb|AAN79814.1|AE016759_88 Flagellar basal-body rod protein flgC [Escherichia coli CFT073]
 gi|1787314|gb|AAC74158.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli str. K-12 substr. MG1655]
 gi|4062651|dbj|BAA35882.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli str. K12 substr. W3110]
 gi|13360916|dbj|BAB34875.1| flagellar rod protein FlgC [Escherichia coli O157:H7 str. Sakai]
 gi|73855113|gb|AAZ87820.1| flagellar protein for cell-proximal portion of basal-body rod
           [Shigella sonnei Ss046]
 gi|81245871|gb|ABB66579.1| cell-proximal portion of basal-body rod [Shigella boydii Sb227]
 gi|91071800|gb|ABE06681.1| flagellar biosynthesis, cell-proximal portion of basal-body rod
           [Escherichia coli UTI89]
 gi|110342842|gb|ABG69079.1| flagellar basal-body rod protein FlgC [Escherichia coli 536]
 gi|115512384|gb|ABJ00459.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli APEC O1]
 gi|157066281|gb|ABV05536.1| flagellar basal-body rod protein FlgC [Escherichia coli HS]
 gi|157080557|gb|ABV20265.1| flagellar basal-body rod protein FlgC [Escherichia coli E24377A]
 gi|169755458|gb|ACA78157.1| flagellar basal-body rod protein FlgC [Escherichia coli ATCC 8739]
 gi|169888560|gb|ACB02267.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli str. K-12 substr. DH10B]
 gi|187430031|gb|ACD09305.1| flagellar basal-body rod protein FlgC [Shigella boydii CDC 3083-94]
 gi|187770492|gb|EDU34336.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. EC4196]
 gi|188017999|gb|EDU56121.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. EC4113]
 gi|188488408|gb|EDU63511.1| flagellar basal-body rod protein FlgC [Escherichia coli 53638]
 gi|188999102|gb|EDU68088.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. EC4076]
 gi|189354569|gb|EDU72988.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. EC4401]
 gi|189363308|gb|EDU81727.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. EC4486]
 gi|189365512|gb|EDU83928.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. EC4501]
 gi|189370511|gb|EDU88927.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. EC869]
 gi|189375937|gb|EDU94353.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. EC508]
 gi|190901474|gb|EDV61235.1| flagellar basal-body rod protein FlgC [Escherichia coli B7A]
 gi|190907299|gb|EDV66897.1| flagellar basal-body rod protein FlgC [Escherichia coli F11]
 gi|192927776|gb|EDV82390.1| flagellar basal-body rod protein FlgC [Escherichia coli E22]
 gi|194413537|gb|EDX29819.1| flagellar basal-body rod protein FlgC [Escherichia coli B171]
 gi|194422933|gb|EDX38927.1| flagellar basal-body rod protein FlgC [Escherichia coli 101-1]
 gi|208725984|gb|EDZ75585.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. EC4206]
 gi|208732811|gb|EDZ81499.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. EC4045]
 gi|208738014|gb|EDZ85697.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. EC4042]
 gi|209162348|gb|ACI39781.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. EC4115]
 gi|209773398|gb|ACI85011.1| flagellar rod protein FlgC [Escherichia coli]
 gi|209773400|gb|ACI85012.1| flagellar rod protein FlgC [Escherichia coli]
 gi|209773402|gb|ACI85013.1| flagellar rod protein FlgC [Escherichia coli]
 gi|209773404|gb|ACI85014.1| flagellar rod protein FlgC [Escherichia coli]
 gi|209773406|gb|ACI85015.1| flagellar rod protein FlgC [Escherichia coli]
 gi|209911587|dbj|BAG76661.1| flagellar basal-body rod protein FlgC [Escherichia coli SE11]
 gi|215264355|emb|CAS08712.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli O127:H6 str. E2348/69]
 gi|217318884|gb|EEC27310.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. TW14588]
 gi|218351340|emb|CAU97046.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli 55989]
 gi|218360421|emb|CAQ97973.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli IAI1]
 gi|218364725|emb|CAR02415.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli S88]
 gi|218370409|emb|CAR18216.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli IAI39]
 gi|218426591|emb|CAR07419.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli ED1a]
 gi|218431579|emb|CAR12458.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli UMN026]
 gi|222032827|emb|CAP75566.1| flagellar basal-body rod protein flgC [Escherichia coli LF82]
 gi|226898150|gb|EEH84409.1| flagellar rod protein FlgC [Escherichia sp. 3_2_53FAA]
 gi|227836772|gb|EEJ47238.1| flagellar basal body rod protein FlgC [Escherichia coli 83972]
 gi|238861102|gb|ACR63100.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli BW2952]
 gi|242376878|emb|CAQ31595.1| flagellar basal-body rod protein FlgC, subunit of Flagellar Motor
           Complex and Flagellum [Escherichia coli BL21(DE3)]
 gi|253324946|gb|ACT29548.1| flagellar basal-body rod protein FlgC [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253973081|gb|ACT38752.1| flagellar basal-body rod protein C [Escherichia coli B str. REL606]
 gi|253977295|gb|ACT42965.1| flagellar basal-body rod protein C [Escherichia coli BL21(DE3)]
 gi|254591856|gb|ACT71217.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli O157:H7 str. TW14359]
 gi|257753206|dbj|BAI24708.1| flagellar component FlgC of cell-proximal portion of basal-body rod
           [Escherichia coli O26:H11 str. 11368]
 gi|257758461|dbj|BAI29958.1| flagellar component FlgC of cell-proximal portion of basal-body rod
           [Escherichia coli O103:H2 str. 12009]
 gi|257763793|dbj|BAI35288.1| flagellar component FlgC of cell-proximal portion of basal-body rod
           [Escherichia coli O111:H- str. 11128]
 gi|260449786|gb|ACX40208.1| flagellar basal-body rod protein FlgC [Escherichia coli DH1]
 gi|281178183|dbj|BAI54513.1| flagellar basal-body rod protein FlgC [Escherichia coli SE15]
 gi|284920897|emb|CBG33960.1| flagellar basal-body rod protein FlgC [Escherichia coli 042]
 gi|290761967|gb|ADD55928.1| Cell-proximal portion of basal-body rod [Escherichia coli O55:H7
           str. CB9615]
 gi|291324183|gb|EFE63605.1| flagellar basal-body rod protein FlgC [Escherichia coli B088]
 gi|291428944|gb|EFF01969.1| flgC [Escherichia coli FVEC1412]
 gi|291434427|gb|EFF07400.1| flagellar basal-body rod protein FlgC [Escherichia coli B185]
 gi|294493232|gb|ADE91988.1| flagellar basal-body rod protein FlgC [Escherichia coli IHE3034]
 gi|298279836|gb|EFI21344.1| flagellar basal-body rod protein FlgC [Escherichia coli FVEC1302]
 gi|299877399|gb|EFI85610.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 196-1]
 gi|300297163|gb|EFJ53548.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 185-1]
 gi|300307088|gb|EFJ61608.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 200-1]
 gi|300318622|gb|EFJ68406.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 175-1]
 gi|300356864|gb|EFJ72734.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 198-1]
 gi|300397106|gb|EFJ80644.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 69-1]
 gi|300405497|gb|EFJ89035.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 84-1]
 gi|300410621|gb|EFJ94159.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 45-1]
 gi|300414170|gb|EFJ97480.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 115-1]
 gi|300421077|gb|EFK04388.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 182-1]
 gi|300450516|gb|EFK14136.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 116-1]
 gi|300456424|gb|EFK19917.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 21-1]
 gi|300463632|gb|EFK27125.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 187-1]
 gi|300526444|gb|EFK47513.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 119-7]
 gi|300530550|gb|EFK51612.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 107-1]
 gi|300839705|gb|EFK67465.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 124-1]
 gi|300844948|gb|EFK72708.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 78-1]
 gi|301076715|gb|EFK91521.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 146-1]
 gi|305852714|gb|EFM53162.1| flagellar basal body rod protein FlgC [Escherichia coli NC101]
 gi|307553076|gb|ADN45851.1| flagellar basal-body rod protein FlgC [Escherichia coli ABU 83972]
 gi|307627456|gb|ADN71760.1| flagellar basal body rod protein FlgC [Escherichia coli UM146]
 gi|308118351|gb|EFO55613.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 145-7]
 gi|309701346|emb|CBJ00647.1| flagellar basal-body rod protein FlgC [Escherichia coli ETEC
           H10407]
 gi|310336413|gb|EFQ01599.1| flagellar basal-body rod protein FlgC [Escherichia coli 1827-70]
 gi|312286254|gb|EFR14167.1| flagellar basal-body rod protein FlgC [Escherichia coli 2362-75]
 gi|312945636|gb|ADR26463.1| flagellar basal body rod protein FlgC [Escherichia coli O83:H1 str.
           NRG 857C]
 gi|315135706|dbj|BAJ42865.1| cell-proximal portion of basal-body rod [Escherichia coli DH1]
 gi|315253875|gb|EFU33843.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 85-1]
 gi|315287371|gb|EFU46782.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 110-3]
 gi|315291068|gb|EFU50431.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 153-1]
 gi|315296705|gb|EFU56000.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 16-3]
 gi|315618244|gb|EFU98834.1| flagellar basal-body rod protein FlgC [Escherichia coli 3431]
 gi|320179226|gb|EFW54184.1| Flagellar basal-body rod protein FlgC [Shigella boydii ATCC 9905]
 gi|320186979|gb|EFW61692.1| Flagellar basal-body rod protein FlgC [Shigella flexneri CDC
           796-83]
 gi|320189757|gb|EFW64413.1| Flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. EC1212]
 gi|320196444|gb|EFW71067.1| Flagellar basal-body rod protein FlgC [Escherichia coli WV_060327]
 gi|320637525|gb|EFX07325.1| flagellar basal body rod protein FlgC [Escherichia coli O157:H7
           str. G5101]
 gi|320643086|gb|EFX12287.1| flagellar basal body rod protein FlgC [Escherichia coli O157:H-
           str. 493-89]
 gi|320648544|gb|EFX17199.1| flagellar basal body rod protein FlgC [Escherichia coli O157:H-
           str. H 2687]
 gi|320653858|gb|EFX21932.1| flagellar basal body rod protein FlgC [Escherichia coli O55:H7 str.
           3256-97 TW 07815]
 gi|320659338|gb|EFX26907.1| flagellar basal body rod protein FlgC [Escherichia coli O55:H7 str.
           USDA 5905]
 gi|320664473|gb|EFX31624.1| flagellar basal body rod protein FlgC [Escherichia coli O157:H7
           str. LSU-61]
 gi|323156881|gb|EFZ43015.1| flagellar basal-body rod protein FlgC [Escherichia coli EPECa14]
 gi|323163756|gb|EFZ49575.1| flagellar basal-body rod protein FlgC [Escherichia coli E128010]
 gi|323174797|gb|EFZ60412.1| flagellar basal-body rod protein FlgC [Escherichia coli LT-68]
 gi|323175695|gb|EFZ61289.1| flagellar basal-body rod protein FlgC [Escherichia coli 1180]
 gi|323185803|gb|EFZ71164.1| flagellar basal-body rod protein FlgC [Escherichia coli 1357]
 gi|323190586|gb|EFZ75858.1| flagellar basal-body rod protein FlgC [Escherichia coli RN587/1]
 gi|323937814|gb|EGB34078.1| flagellar basal-body rod protein FlgC [Escherichia coli E1520]
 gi|323942543|gb|EGB38710.1| flagellar basal-body rod protein FlgC [Escherichia coli E482]
 gi|323947624|gb|EGB43628.1| flagellar basal-body rod protein FlgC [Escherichia coli H120]
 gi|323953240|gb|EGB49106.1| flagellar basal-body rod protein FlgC [Escherichia coli H252]
 gi|323957898|gb|EGB53610.1| flagellar basal-body rod protein FlgC [Escherichia coli H263]
 gi|323962673|gb|EGB58251.1| flagellar basal-body rod protein FlgC [Escherichia coli H489]
 gi|323967015|gb|EGB62441.1| flagellar basal-body rod protein FlgC [Escherichia coli M863]
 gi|323973337|gb|EGB68526.1| flagellar basal-body rod protein FlgC [Escherichia coli TA007]
 gi|323976553|gb|EGB71641.1| flagellar basal-body rod protein FlgC [Escherichia coli TW10509]
 gi|324007914|gb|EGB77133.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 57-2]
 gi|324013348|gb|EGB82567.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 60-1]
 gi|324017422|gb|EGB86641.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 117-3]
 gi|324117355|gb|EGC11262.1| flagellar basal-body rod protein FlgC [Escherichia coli E1167]
 gi|326339296|gb|EGD63110.1| Flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. 1125]
 gi|326344743|gb|EGD68491.1| Flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. 1044]
 gi|327253473|gb|EGE65111.1| flagellar basal-body rod protein FlgC [Escherichia coli STEC_7v]
 gi|330910888|gb|EGH39398.1| flagellar basal-body rod protein FlgC [Escherichia coli AA86]
 gi|331038416|gb|EGI10636.1| flagellar basal-body rod protein FlgC [Escherichia coli H736]
 gi|331045084|gb|EGI17211.1| flagellar basal-body rod protein FlgC [Escherichia coli M605]
 gi|331050405|gb|EGI22463.1| flagellar basal-body rod protein FlgC [Escherichia coli M718]
 gi|331055384|gb|EGI27393.1| flagellar basal-body rod protein FlgC [Escherichia coli TA206]
 gi|331060902|gb|EGI32866.1| flagellar basal-body rod protein FlgC [Escherichia coli TA143]
 gi|331065059|gb|EGI36954.1| flagellar basal-body rod protein FlgC [Escherichia coli TA271]
 gi|331070237|gb|EGI41603.1| flagellar basal-body rod protein FlgC [Escherichia coli TA280]
 gi|331075554|gb|EGI46852.1| flagellar basal-body rod protein FlgC [Escherichia coli H591]
 gi|331080207|gb|EGI51386.1| flagellar basal-body rod protein FlgC [Escherichia coli H299]
 gi|332094031|gb|EGI99083.1| flagellar basal-body rod protein FlgC [Shigella boydii 3594-74]
 gi|332102090|gb|EGJ05436.1| flagellar rod protein FlgC [Shigella sp. D9]
 gi|332342620|gb|AEE55954.1| flagellar basal-body rod protein FlgC [Escherichia coli UMNK88]
          Length = 134

 Score =  114 bits (285), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 41/134 (30%), Positives = 67/134 (50%), Gaps = 2/134 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--G 59
             L+    IA S L  QS R+ + + N+ANA +     G     ++ +       G+  G
Sbjct: 1   MALLNIFDIAGSALTAQSQRLNVAASNLANADSVTGPDGQPYRAKQVVFQVNAAPGAATG 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GV+V  +   Q+     ++PG+P+A+A G VK PNV+V+ E  +    +R Y AN++ + 
Sbjct: 61  GVKVADVIESQAPDKLVYEPGNPLADAKGYVKMPNVDVVGEMVNTMSASRSYQANVEVLN 120

Query: 120 QSHDMMTTTLDLLR 133
               MM  TL L +
Sbjct: 121 TVKSMMLKTLTLGQ 134


>gi|254720612|ref|ZP_05182423.1| flagellar basal body rod protein FlgC [Brucella sp. 83/13]
 gi|265985652|ref|ZP_06098387.1| flagellar basal-body rod protein FlgC [Brucella sp. 83/13]
 gi|306838574|ref|ZP_07471411.1| flagellar basal-body rod protein FlgC [Brucella sp. NF 2653]
 gi|264664244|gb|EEZ34505.1| flagellar basal-body rod protein FlgC [Brucella sp. 83/13]
 gi|306406360|gb|EFM62602.1| flagellar basal-body rod protein FlgC [Brucella sp. NF 2653]
          Length = 140

 Score =  114 bits (285), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 71/136 (52%), Positives = 98/136 (72%), Gaps = 3/136 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
           D L ++  IA SGL+ QS R++I+SENIANA++T  T  +DPYRRKT+SF   +    G 
Sbjct: 4   DALQSTLKIAASGLSAQSTRLRIVSENIANAQSTARTADADPYRRKTVSFRTELEQGTGA 63

Query: 62  ---RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
              RV ++G D S F+E++DP HP A+A G VKYPNVN++VE ADMRE NR Y ANLQ +
Sbjct: 64  AEVRVAEVGKDTSPFIEQYDPSHPAADARGYVKYPNVNMVVEMADMREANRSYEANLQVV 123

Query: 119 KQSHDMMTTTLDLLRD 134
           +Q+ ++++ T+DLLR 
Sbjct: 124 RQARELISMTIDLLRS 139


>gi|146311244|ref|YP_001176318.1| flagellar basal body rod protein FlgC [Enterobacter sp. 638]
 gi|145318120|gb|ABP60267.1| flagellar basal-body rod protein FlgC [Enterobacter sp. 638]
          Length = 134

 Score =  114 bits (285), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 42/134 (31%), Positives = 68/134 (50%), Gaps = 2/134 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--G 59
             L+    IA S L  QS R+ + + N+ANA +     G     ++ +   +   G   G
Sbjct: 1   MALLNIFDIAGSALTAQSQRLNVAASNMANADSVTGPDGQPYRAKQVVFQVDAAPGGATG 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GV+V  +   Q+     F+PG+P+A+A+G VK PNV+V+ E  +    +R Y AN++ + 
Sbjct: 61  GVKVSSVVESQAPDKLVFEPGNPLADANGYVKMPNVDVVGEMVNTMSASRSYQANVEVLN 120

Query: 120 QSHDMMTTTLDLLR 133
               MM  TL L +
Sbjct: 121 TVKSMMLKTLTLGQ 134


>gi|325529011|gb|EGD06024.1| flagellar basal body rod protein FlgC [Burkholderia sp. TJI49]
          Length = 141

 Score =  114 bits (285), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 42/140 (30%), Positives = 71/140 (50%), Gaps = 8/140 (5%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM----- 55
           M  L+    +A S L+ QS R+ + + N+ANA +     G     ++ +   + +     
Sbjct: 1   MPSLMNIFGVAGSALSAQSQRLNVTASNLANADSATGPDGKPYKAKQVVFATDPIGGART 60

Query: 56  ---HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
               G GGVRV K+  D S     +DP +P A+A+G V+ PNV+ + E  +M   +R Y 
Sbjct: 61  ASGQGVGGVRVTKVVDDPSPMKSTYDPANPAADANGYVQMPNVDPVQEMVNMISASRSYQ 120

Query: 113 ANLQTIKQSHDMMTTTLDLL 132
           AN++T+  +  +M  TL + 
Sbjct: 121 ANVETLNTAKQLMLKTLTIG 140


>gi|148270547|ref|YP_001245007.1| flagellar basal-body rod protein FlgC [Thermotoga petrophila RKU-1]
 gi|170289253|ref|YP_001739491.1| flagellar basal-body rod protein FlgC [Thermotoga sp. RQ2]
 gi|147736091|gb|ABQ47431.1| flagellar basal-body rod protein FlgC [Thermotoga petrophila RKU-1]
 gi|170176756|gb|ACB09808.1| flagellar basal-body rod protein FlgC [Thermotoga sp. RQ2]
          Length = 140

 Score =  114 bits (285), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 51/140 (36%), Positives = 73/140 (52%), Gaps = 8/140 (5%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG--- 57
           M       +I+ +G++ Q  R++I+S NIANA TT    G  PYRRK   F E +     
Sbjct: 1   MMSEFEIMNISATGMSAQRLRVEIVSTNIANAETTRTETGE-PYRRKVPVFAEYLRRTPN 59

Query: 58  ----SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
               S GV+V KI  D S F   +DP HP A+ +G V+ PNVN++ E  D+    R Y A
Sbjct: 60  GKIESAGVKVVKIEEDPSPFRLVYDPAHPDADENGYVRMPNVNIVREMVDLINAQRAYDA 119

Query: 114 NLQTIKQSHDMMTTTLDLLR 133
           N+     +  M+ + L + R
Sbjct: 120 NVAAFNVTKAMVNSALQIGR 139


>gi|253682065|ref|ZP_04862862.1| flagellar basal-body rod protein FlgC [Clostridium botulinum D str.
           1873]
 gi|253561777|gb|EES91229.1| flagellar basal-body rod protein FlgC [Clostridium botulinum D str.
           1873]
          Length = 145

 Score =  114 bits (285), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 51/145 (35%), Positives = 69/145 (47%), Gaps = 13/145 (8%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGS-DPYRRKTISFEEVMHGS-- 58
               +S  I+ SGL+ +  RM  IS NI N +TT    G+ +PYRRK   F+E +     
Sbjct: 1   MNAFSSLRISASGLSAERLRMDTISSNITNFKTTRGKDGNKEPYRRKIAVFQENLKKELS 60

Query: 59  ----------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                      GV+   I  D+S     ++P HP A+  G V  PNVN+L E ADM    
Sbjct: 61  KDKKGYETSLNGVKAVGIVEDKSPLRRVYNPNHPDADKDGYVLMPNVNILNEMADMIAAT 120

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R Y AN+  I  S  M    L++ R
Sbjct: 121 RAYEANVTAINSSKSMFMKALEIGR 145


>gi|320173527|gb|EFW48723.1| Flagellar basal-body rod protein FlgC [Shigella dysenteriae CDC
           74-1112]
          Length = 134

 Score =  114 bits (284), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 40/134 (29%), Positives = 66/134 (49%), Gaps = 2/134 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--G 59
             L+    IA S L  Q  R+ + + N+ANA +     G     ++ +       G+  G
Sbjct: 1   MALLNIFDIAGSALTAQFQRLNVAASNLANADSVTGPDGQPYRAKQVVFQVNAAPGAATG 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GV+V  +   Q+     ++PG+P+A+A G VK PNV+V+ E  +    +R Y AN++ + 
Sbjct: 61  GVKVADVIESQAPDKLVYEPGNPLADAKGYVKMPNVDVVGEMVNTMSASRSYQANVEVLN 120

Query: 120 QSHDMMTTTLDLLR 133
               MM  TL L +
Sbjct: 121 TVKSMMLKTLTLGQ 134


>gi|288940407|ref|YP_003442647.1| flagellar basal-body rod protein FlgC [Allochromatium vinosum DSM
           180]
 gi|288895779|gb|ADC61615.1| flagellar basal-body rod protein FlgC [Allochromatium vinosum DSM
           180]
          Length = 139

 Score =  114 bits (284), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 37/139 (26%), Positives = 63/139 (45%), Gaps = 5/139 (3%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG--- 57
           M  L    + + S L  QS R+  ++ N+ANA  T  T       +  +    +      
Sbjct: 1   MSDLFRIFNTSASALTAQSVRLNTVASNMANAAMTASTAEDTYRAKHVLFQTVIDQEDPN 60

Query: 58  --SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
             +  VRV  I  D+   +  ++P HP AN  G V  P +NV+ E A+M   +R Y AN+
Sbjct: 61  GVAMPVRVAGIVDDECEPIPTYEPNHPHANEEGYVFRPAINVVEEMANMMSASRSYEANV 120

Query: 116 QTIKQSHDMMTTTLDLLRD 134
           + +  +  ++  TL + + 
Sbjct: 121 EVLTTARSLLQRTLQVGQS 139


>gi|45656202|ref|YP_000288.1| flagellar basal body rod protein FlgC [Leptospira interrogans
           serovar Copenhageni str. Fiocruz L1-130]
 gi|45599436|gb|AAS68925.1| flagellar basal-body rod protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 155

 Score =  114 bits (284), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 49/152 (32%), Positives = 72/152 (47%), Gaps = 20/152 (13%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV------- 54
             L +S +I+ +GL+ Q  RM +IS NIAN+ TT +T G  P+RR  +    +       
Sbjct: 3   MGLFSSINISATGLSAQRLRMDVISNNIANSTTTRNTNGDGPFRRDRVVMTPINLRTKWR 62

Query: 55  ---------MHGSGGVRVKKIGVDQSTFVEEFDPGHPVA----NASGIVKYPNVNVLVET 101
                         GV+V K+  D +     +DP HP +       G V+ PNVN++ E 
Sbjct: 63  SPVYPFGVSPGEGKGVKVMKVEKDMTPLRLVYDPTHPDSIQIGPKKGYVEMPNVNIVTEM 122

Query: 102 ADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            DM   +R Y AN+Q I  S  M    L++ R
Sbjct: 123 TDMISASRSYEANVQMINGSKAMFNKALEIGR 154


>gi|302878274|ref|YP_003846838.1| flagellar basal-body rod protein FlgC [Gallionella
           capsiferriformans ES-2]
 gi|302581063|gb|ADL55074.1| flagellar basal-body rod protein FlgC [Gallionella
           capsiferriformans ES-2]
          Length = 134

 Score =  114 bits (284), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 41/134 (30%), Positives = 69/134 (51%), Gaps = 2/134 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--G 59
             L    ++A SG+A QS R+ +++ N+ANA +T    G     ++ +     M  +   
Sbjct: 1   MSLFNIFNVAGSGMAAQSQRLNVVASNLANADSTTGADGKPYRAKQVVFSATPMGSTDVQ 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GV+V ++  D S     +DP HP+A+A G V  PNVNV+ E  +M   +R Y  N+  + 
Sbjct: 61  GVKVVRVAEDTSPMKIVYDPKHPMADAKGYVSMPNVNVVDEMVNMISASRAYQNNVDVLN 120

Query: 120 QSHDMMTTTLDLLR 133
            S  ++  TL + +
Sbjct: 121 TSKTLLLKTLTIGQ 134


>gi|89068702|ref|ZP_01156088.1| flagellar basal body rod protein [Oceanicola granulosus HTCC2516]
 gi|89045665|gb|EAR51727.1| flagellar basal body rod protein [Oceanicola granulosus HTCC2516]
          Length = 136

 Score =  114 bits (284), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 62/136 (45%), Positives = 85/136 (62%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD L +   IA SG+  Q  R++I++EN+ANA + G TPG+DPYRRKT+SFEE++    G
Sbjct: 1   MDPLKSITSIAASGMHAQGQRLRIVAENVANADSRGTTPGADPYRRKTVSFEEMIDRESG 60

Query: 61  ---VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
              V+V +IG D + F    DP HP A+ +G VK PNVN ++E  +MRE  R Y AN+  
Sbjct: 61  AALVKVGEIGRDTTDFTLVHDPAHPAADENGFVKVPNVNAIIEMTNMREAARSYEANMNM 120

Query: 118 IKQSHDMMTTTLDLLR 133
            +    M    LDLL+
Sbjct: 121 YEAGRAMRQQILDLLK 136


>gi|222100200|ref|YP_002534768.1| Flagellar basal-body rod protein FlgC [Thermotoga neapolitana DSM
           4359]
 gi|221572590|gb|ACM23402.1| Flagellar basal-body rod protein FlgC [Thermotoga neapolitana DSM
           4359]
          Length = 139

 Score =  114 bits (284), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 50/136 (36%), Positives = 73/136 (53%), Gaps = 8/136 (5%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG------- 57
               +I+ +G++ Q  R++I+S NIANA TT    G  PYRRK   F E +         
Sbjct: 4   FDIMNISATGMSAQRLRVEIVSTNIANAETTRTEMGE-PYRRKVPVFAEYLRRAKDGRIE 62

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           S GV+V KI  D S F   +DP HP A+ +G V+ PNVN++ E  D+    R Y AN+  
Sbjct: 63  SAGVKVVKIVEDPSPFRLVYDPTHPDADENGYVRMPNVNIVREMVDLINAQRAYDANVAA 122

Query: 118 IKQSHDMMTTTLDLLR 133
              + +M+ + L + R
Sbjct: 123 FNVTKNMVNSALQIGR 138


>gi|148558590|ref|YP_001257211.1| flagellar basal body rod protein FlgC [Brucella ovis ATCC 25840]
 gi|148369875|gb|ABQ62747.1| flagellar basal-body rod protein FlgC [Brucella ovis ATCC 25840]
          Length = 140

 Score =  114 bits (284), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 72/136 (52%), Positives = 99/136 (72%), Gaps = 3/136 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
           D L ++  IA SGL+VQS R++I+SENIANA++T  T  +DPYRRKT+SF   +    G 
Sbjct: 4   DALQSTLKIAASGLSVQSTRLRIVSENIANAQSTARTADTDPYRRKTVSFRAELEQGTGA 63

Query: 62  ---RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
              RV ++G D S F+E++DP HP A+A G VKYPNVN++VE ADMRE NR Y ANLQ +
Sbjct: 64  AEVRVAEVGKDTSPFIEQYDPSHPAADARGYVKYPNVNMVVEMADMREANRSYEANLQVV 123

Query: 119 KQSHDMMTTTLDLLRD 134
           +Q+ ++++ T+DLLR 
Sbjct: 124 RQARELISMTIDLLRS 139


>gi|16760051|ref|NP_455668.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Typhi str. CT18]
 gi|16764531|ref|NP_460146.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|29142178|ref|NP_805520.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
 gi|56413838|ref|YP_150913.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|62179692|ref|YP_216109.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|161614602|ref|YP_001588567.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|167553037|ref|ZP_02346787.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|167994039|ref|ZP_02575131.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|168234101|ref|ZP_02659159.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|168237257|ref|ZP_02662315.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
 gi|168244774|ref|ZP_02669706.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|168264032|ref|ZP_02686005.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|168467127|ref|ZP_02700969.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|168822618|ref|ZP_02834618.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|194446237|ref|YP_002040429.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194448226|ref|YP_002045174.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|194469652|ref|ZP_03075636.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|194737972|ref|YP_002114174.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|197250491|ref|YP_002146868.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|197264065|ref|ZP_03164139.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|197362761|ref|YP_002142398.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
 gi|198244048|ref|YP_002215962.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|200389763|ref|ZP_03216374.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|204930701|ref|ZP_03221574.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
 gi|205353087|ref|YP_002226888.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|207857317|ref|YP_002243968.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|213161846|ref|ZP_03347556.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Typhi str. E00-7866]
 gi|213419883|ref|ZP_03352949.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Typhi str. E01-6750]
 gi|213424678|ref|ZP_03357443.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Typhi str. E02-1180]
 gi|213582035|ref|ZP_03363861.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-0664]
 gi|213615928|ref|ZP_03371754.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-2068]
 gi|213648924|ref|ZP_03378977.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Typhi str. J185]
 gi|213865507|ref|ZP_03387626.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Typhi str. M223]
 gi|224584321|ref|YP_002638119.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|238911005|ref|ZP_04654842.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Tennessee str. CDC07-0191]
 gi|289828582|ref|ZP_06546407.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-3139]
 gi|60392283|sp|P0A1I7|FLGC_SALTY RecName: Full=Flagellar basal-body rod protein flgC; AltName:
           Full=Putative proximal rod protein
 gi|60392284|sp|P0A1I8|FLGC_SALTI RecName: Full=Flagellar basal-body rod protein flgC; AltName:
           Full=Putative proximal rod protein
 gi|25298909|pir||AH0639 probable flagellar basal-body rod protein FlgC (proximal rod
           protein) STY1214 [imported] - Salmonella enterica subsp.
           enterica serovar Typhi (strain CT18)
 gi|16419692|gb|AAL20105.1| flagellar biosynthesis protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|16502345|emb|CAD08299.1| putative flagellar basal-body rod protein FlgC (proximal rod
           protein) [Salmonella enterica subsp. enterica serovar
           Typhi]
 gi|29137808|gb|AAO69369.1| putative flagellar basal-body rod protein FlgC [Salmonella enterica
           subsp. enterica serovar Typhi str. Ty2]
 gi|56128095|gb|AAV77601.1| putative flagellar basal-body rod protein FlgC (proximal rod
           protein) [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. ATCC 9150]
 gi|62127325|gb|AAX65028.1| flagellar biosynthesis, cell-proximal portion of basal-body rod
           [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|161363966|gb|ABX67734.1| hypothetical protein SPAB_02352 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194404900|gb|ACF65122.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194406530|gb|ACF66749.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|194456016|gb|EDX44855.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|194713474|gb|ACF92695.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|195630453|gb|EDX49079.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|197094238|emb|CAR59743.1| putative flagellar basal-body rod protein FlgC (proximal rod
           protein) [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. AKU_12601]
 gi|197214194|gb|ACH51591.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|197242320|gb|EDY24940.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|197289825|gb|EDY29186.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
 gi|197938564|gb|ACH75897.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|199602208|gb|EDZ00754.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|204320160|gb|EDZ05364.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
 gi|205272868|emb|CAR37797.1| putative flagellar basal-body rod protein FlgC (proximal rod
           protein) [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 287/91]
 gi|205322443|gb|EDZ10282.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|205328049|gb|EDZ14813.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|205331940|gb|EDZ18704.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|205336413|gb|EDZ23177.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|205341032|gb|EDZ27796.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|205347372|gb|EDZ34003.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|206709120|emb|CAR33453.1| putative flagellar basal-body rod protein FlgC (proximal rod
           protein) [Salmonella enterica subsp. enterica serovar
           Enteritidis str. P125109]
 gi|224468848|gb|ACN46678.1| flagellar basal body rod protein [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|261246386|emb|CBG24195.1| putative flagellar basal-body rod protein FlgC (proximal rod
           protein) [Salmonella enterica subsp. enterica serovar
           Typhimurium str. D23580]
 gi|267992949|gb|ACY87834.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 14028S]
 gi|301157716|emb|CBW17208.1| putative flagellar basal-body rod protein FlgC (proximal rod
           protein) [Salmonella enterica subsp. enterica serovar
           Typhimurium str. SL1344]
 gi|312912162|dbj|BAJ36136.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Typhimurium str. T000240]
 gi|320086385|emb|CBY96158.1| Flagellar basal-body rod protein flgC [Salmonella enterica subsp.
           enterica serovar Weltevreden str. 2007-60-3289-1]
 gi|321223793|gb|EFX48856.1| Flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Typhimurium str. TN061786]
 gi|322616545|gb|EFY13454.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315996572]
 gi|322620514|gb|EFY17378.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-1]
 gi|322622508|gb|EFY19353.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-3]
 gi|322629659|gb|EFY26434.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-4]
 gi|322632621|gb|EFY29367.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-1]
 gi|322636884|gb|EFY33587.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-2]
 gi|322641578|gb|EFY38216.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 531954]
 gi|322644068|gb|EFY40614.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. NC_MB110209-0054]
 gi|322653957|gb|EFY50280.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. CASC_09SCPH15965]
 gi|322658489|gb|EFY54751.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 19N]
 gi|322663347|gb|EFY59549.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 81038-01]
 gi|322670081|gb|EFY66221.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. MD_MDA09249507]
 gi|322674855|gb|EFY70946.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 414877]
 gi|322676675|gb|EFY72742.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 366867]
 gi|322682597|gb|EFY78616.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 413180]
 gi|322686650|gb|EFY82629.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 446600]
 gi|322714162|gb|EFZ05733.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. A50]
 gi|323129445|gb|ADX16875.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 4/74]
 gi|323195764|gb|EFZ80940.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609458-1]
 gi|323198344|gb|EFZ83448.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556150-1]
 gi|323203172|gb|EFZ88202.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609460]
 gi|323209175|gb|EFZ94112.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 507440-20]
 gi|323209679|gb|EFZ94608.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556152]
 gi|323217865|gb|EGA02580.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB101509-0077]
 gi|323222153|gb|EGA06537.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB102109-0047]
 gi|323224925|gb|EGA09183.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB110209-0055]
 gi|323229667|gb|EGA13790.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB111609-0052]
 gi|323232892|gb|EGA16988.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009083312]
 gi|323240627|gb|EGA24669.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009085258]
 gi|323242941|gb|EGA26962.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315731156]
 gi|323250258|gb|EGA34147.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2009159199]
 gi|323252633|gb|EGA36471.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008282]
 gi|323258839|gb|EGA42492.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008283]
 gi|323261028|gb|EGA44621.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008284]
 gi|323266937|gb|EGA50422.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008285]
 gi|323269978|gb|EGA53427.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008287]
 gi|326623710|gb|EGE30055.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Dublin str. 3246]
 gi|326628167|gb|EGE34510.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 9]
 gi|332988066|gb|AEF07049.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Typhimurium str. UK-1]
          Length = 134

 Score =  114 bits (284), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 41/134 (30%), Positives = 69/134 (51%), Gaps = 2/134 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM--HGSG 59
             L+    IA S LA QS R+ + + N+ANA +     G     ++ +   +      +G
Sbjct: 1   MALLNIFDIAGSALAAQSKRLNVAASNLANADSVTGPDGQPYRAKQVVFQVDAAPGQATG 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GV+V  +   Q+     ++PG+P+A+A+G VK PNV+V+ E  +    +R Y AN++ + 
Sbjct: 61  GVKVASVIESQAPEKLVYEPGNPLADANGYVKMPNVDVVGEMVNTMSASRSYQANIEVLN 120

Query: 120 QSHDMMTTTLDLLR 133
               MM  TL L +
Sbjct: 121 TVKSMMLKTLTLGQ 134


>gi|13472574|ref|NP_104141.1| flagellar basal body rod protein FlgC [Mesorhizobium loti
           MAFF303099]
 gi|14023320|dbj|BAB49927.1| flagellar basal-body rod protein; FlgC [Mesorhizobium loti
           MAFF303099]
          Length = 138

 Score =  114 bits (284), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 71/137 (51%), Positives = 94/137 (68%), Gaps = 3/137 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD L A+  +A SGL  QS R++++SEN+ANA++TG TPG+DPYRRKTISF   +  + G
Sbjct: 1   MDALTAALKVAASGLGAQSERLRVVSENLANAQSTGTTPGADPYRRKTISFVSELDRASG 60

Query: 61  V---RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
                V  I  D S F  EF PG+  A+  G VK PNVNVL+E ADM E NR Y ANLQ 
Sbjct: 61  ASTVEVNSIDRDPSVFPVEFQPGNEAADEKGYVKMPNVNVLIEMADMTEANRSYEANLQV 120

Query: 118 IKQSHDMMTTTLDLLRD 134
           +KQ+ D+++ T+DL+R+
Sbjct: 121 VKQARDLISMTIDLMRN 137


>gi|319405399|emb|CBI79018.1| Flagellar basal-body rod protein flgC [Bartonella sp. AR 15-3]
          Length = 138

 Score =  114 bits (284), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 65/135 (48%), Positives = 100/135 (74%), Gaps = 3/135 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG---S 58
           D LIA+  IA +GL+ QS R+++I+EN+AN  +TG + G+ PY+RKT+SFE +++    +
Sbjct: 3   DLLIAAEQIATTGLSAQSTRLRVIAENLANVNSTGKSAGARPYQRKTVSFEAILNPYLDA 62

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
            GV V +I  D++ F+  ++PGH  A+++G VKYPNVN ++E ADMRE NR Y ANLQ I
Sbjct: 63  QGVHVTRISTDKAPFIMRYEPGHLAADSNGYVKYPNVNSIIEMADMREANRSYEANLQVI 122

Query: 119 KQSHDMMTTTLDLLR 133
           +Q+ D+++ T+DLL+
Sbjct: 123 RQARDLVSQTIDLLK 137


>gi|2916794|emb|CAA11960.1| flagellar basal-body rod protein [Sinorhizobium meliloti]
          Length = 139

 Score =  113 bits (283), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 75/136 (55%), Positives = 100/136 (73%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD L  +  ++ SGL  +S R++I+SENIANAR+TGD PG+DP+RRKTISF   +  + G
Sbjct: 1   MDPLTLALKVSASGLQAESTRLRIVSENIANARSTGDAPGADPFRRKTISFAAEVDRASG 60

Query: 61  V---RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
                V+++G D S F  EFDPG+P A+  G+VK PN+N+L+E ADMRE NR Y ANLQT
Sbjct: 61  ASLVEVERLGTDDSEFNIEFDPGNPAADEKGMVKLPNLNILIEMADMREANRAYEANLQT 120

Query: 118 IKQSHDMMTTTLDLLR 133
           IKQS D+++ T+DLLR
Sbjct: 121 IKQSRDLISQTIDLLR 136


>gi|161526188|ref|YP_001581200.1| flagellar basal body rod protein FlgC [Burkholderia multivorans
           ATCC 17616]
 gi|189349096|ref|YP_001944724.1| flagellar basal body rod protein FlgC [Burkholderia multivorans
           ATCC 17616]
 gi|221199737|ref|ZP_03572780.1| flagellar basal-body rod protein FlgC [Burkholderia multivorans
           CGD2M]
 gi|221208658|ref|ZP_03581658.1| flagellar basal-body rod protein FlgC [Burkholderia multivorans
           CGD2]
 gi|221215569|ref|ZP_03588532.1| flagellar basal-body rod protein FlgC [Burkholderia multivorans
           CGD1]
 gi|160343617|gb|ABX16703.1| flagellar basal-body rod protein FlgC [Burkholderia multivorans
           ATCC 17616]
 gi|189333118|dbj|BAG42188.1| flagellar basal-body rod protein [Burkholderia multivorans ATCC
           17616]
 gi|221164557|gb|EED97040.1| flagellar basal-body rod protein FlgC [Burkholderia multivorans
           CGD1]
 gi|221171469|gb|EEE03916.1| flagellar basal-body rod protein FlgC [Burkholderia multivorans
           CGD2]
 gi|221179976|gb|EEE12380.1| flagellar basal-body rod protein FlgC [Burkholderia multivorans
           CGD2M]
          Length = 141

 Score =  113 bits (283), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 42/140 (30%), Positives = 71/140 (50%), Gaps = 8/140 (5%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM----- 55
           M  L+    +A S L+ QS R+ + + N+ANA +     G     ++ +   + +     
Sbjct: 1   MPSLMNIFGVAGSALSAQSQRLNVTASNLANADSATGPDGKPYKAKQVVFATDPIGGART 60

Query: 56  ---HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
               G GGVRV K+  D S     +DP +P A+A+G V+ PNV+ + E  +M   +R Y 
Sbjct: 61  ASGQGVGGVRVTKVIDDPSPMKSTYDPANPAADANGYVQMPNVDPVQEMVNMISASRSYQ 120

Query: 113 ANLQTIKQSHDMMTTTLDLL 132
           AN++T+  +  +M  TL + 
Sbjct: 121 ANVETLNTAKQLMLKTLTIG 140


>gi|308186391|ref|YP_003930522.1| Flagellar basal-body rod protein flgC [Pantoea vagans C9-1]
 gi|308056901|gb|ADO09073.1| Flagellar basal-body rod protein flgC [Pantoea vagans C9-1]
          Length = 134

 Score =  113 bits (283), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 41/134 (30%), Positives = 70/134 (52%), Gaps = 2/134 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--G 59
             L+    IA S +  QS R+ + + N+ANA +     G     ++ +   +   GS  G
Sbjct: 1   MALLNIFDIAGSAMTAQSQRLNVSASNLANADSVTGPDGKPYVAKQVVFQTDAAPGSATG 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GV+V ++  D +     +DPG+P+A+A G VK PNV+V+ E+ +    +R Y AN++ + 
Sbjct: 61  GVKVARVVDDPTPAKLVYDPGNPMADAKGYVKMPNVDVVSESVNTMSASRSYQANVEVLN 120

Query: 120 QSHDMMTTTLDLLR 133
               MM  TL + +
Sbjct: 121 TVKSMMMKTLTIGQ 134


>gi|308050374|ref|YP_003913940.1| flagellar basal-body rod protein FlgC [Ferrimonas balearica DSM
           9799]
 gi|307632564|gb|ADN76866.1| flagellar basal-body rod protein FlgC [Ferrimonas balearica DSM
           9799]
          Length = 139

 Score =  113 bits (283), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 45/138 (32%), Positives = 64/138 (46%), Gaps = 6/138 (4%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-- 59
             L      A SG++ QS R+   + NIANA +   + G     R+ I    +   SG  
Sbjct: 1   MSLFKIFDTAGSGMSAQSVRLNTTASNIANANSVSSSAGETYRARQPIFEAALQQASGYQ 60

Query: 60  ----GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
                V+V  I       V +F P HP+A+  G +  PNVNV+ E A+M   +R Y AN+
Sbjct: 61  NQSVPVQVAGIVESDKPLVRQFSPNHPLADQEGYIYKPNVNVVEEMANMISASRSYQANV 120

Query: 116 QTIKQSHDMMTTTLDLLR 133
           Q    + DM   TL L +
Sbjct: 121 QVASAAKDMAQQTLRLGK 138


>gi|297617136|ref|YP_003702295.1| flagellar basal-body rod protein FlgC [Syntrophothermus lipocalidus
           DSM 12680]
 gi|297144973|gb|ADI01730.1| flagellar basal-body rod protein FlgC [Syntrophothermus lipocalidus
           DSM 12680]
          Length = 145

 Score =  113 bits (283), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 50/145 (34%), Positives = 67/145 (46%), Gaps = 13/145 (8%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF---------- 51
              + +  I+ SG+  Q  RM +IS N+AN  TT    G    R+  I            
Sbjct: 1   MRFLNAFDISASGMTAQRLRMDVISNNLANVNTTRTPQGGPYRRQMVIFEARTPSKGNFK 60

Query: 52  ---EEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 M G GGVRVK I  D S F   +DPG+P A+  G V  PNVNV+ E  DM    
Sbjct: 61  DLLSAYMEGEGGVRVKAIREDTSPFKRVYDPGNPDADQDGYVNMPNVNVVSEMVDMISAT 120

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R Y AN+  ++ +  M    L++ R
Sbjct: 121 RAYEANVSAVEATKSMAMKALEIGR 145


>gi|317492430|ref|ZP_07950859.1| flagellar basal-body rod protein FlgC [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316919769|gb|EFV41099.1| flagellar basal-body rod protein FlgC [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 134

 Score =  113 bits (283), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 39/134 (29%), Positives = 69/134 (51%), Gaps = 2/134 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM--HGSG 59
             ++    I+ S LA QS RM + + N+ANA +     G     ++ +   +      +G
Sbjct: 1   MSMLNIFDISGSALAAQSQRMNVAASNMANADSVTGPDGEPYRAKQVVFEVQAAPGQETG 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GV+V ++  D S     + PG+P+A+A G V+ PNV+V+ E  +    +R Y AN++ + 
Sbjct: 61  GVKVSQLVDDPSPERLVYQPGNPLADAKGYVRMPNVDVVGEMVNSIAASRSYQANVEVLN 120

Query: 120 QSHDMMTTTLDLLR 133
            +  +M  TL L +
Sbjct: 121 TTKSLMMKTLTLGQ 134


>gi|327399355|ref|YP_004340224.1| flagellar basal-body rod protein FlgC [Hippea maritima DSM 10411]
 gi|327181984|gb|AEA34165.1| flagellar basal-body rod protein FlgC [Hippea maritima DSM 10411]
          Length = 137

 Score =  113 bits (283), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 44/136 (32%), Positives = 66/136 (48%), Gaps = 4/136 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS----FEEVMHG 57
             +  S +IA+SG++ Q  RM IIS NIANA T     G    RR  +     + +    
Sbjct: 1   MSIFDSMNIASSGMSAQRLRMNIISSNIANADTVRTPEGGPYKRRDVVFEAIGYSKFSDV 60

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
              V+V  I  D +     +DP +P+AN  G V YPN+N ++E  ++ +  R Y AN   
Sbjct: 61  LKKVQVADIIRDDTPPKLVYDPSNPLANKDGYVAYPNINPVIEMTNLIDAMRTYQANASV 120

Query: 118 IKQSHDMMTTTLDLLR 133
           I  +   +   L +LR
Sbjct: 121 IDSAKQTIQAALGILR 136


>gi|319781683|ref|YP_004141159.1| flagellar basal-body rod protein FlgC [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317167571|gb|ADV11109.1| flagellar basal-body rod protein FlgC [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 138

 Score =  113 bits (283), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 71/137 (51%), Positives = 93/137 (67%), Gaps = 3/137 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD L A+  +A SGL  QS R++++SEN+ANA++TG  PGSDPYRRKTISF   +  + G
Sbjct: 1   MDALTAALKVAASGLGAQSERLRVVSENLANAQSTGTAPGSDPYRRKTISFVSELDRASG 60

Query: 61  VR---VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
                V  I  D S F  EF PG+  A+  G VK PNVNVL+E ADM E NR Y ANLQ 
Sbjct: 61  SSTVAVNSIDRDPSDFPVEFQPGNEAADEKGYVKMPNVNVLIEMADMTEANRSYEANLQV 120

Query: 118 IKQSHDMMTTTLDLLRD 134
           +KQ+ D+++ T+DL+R+
Sbjct: 121 VKQARDLISMTIDLMRN 137


>gi|254251189|ref|ZP_04944507.1| flagella basal body rod protein [Burkholderia dolosa AUO158]
 gi|124893798|gb|EAY67678.1| flagella basal body rod protein [Burkholderia dolosa AUO158]
          Length = 141

 Score =  113 bits (283), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 42/140 (30%), Positives = 70/140 (50%), Gaps = 8/140 (5%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM----- 55
           M  L+    +A S L+ QS R+ + + N+ANA +     G     ++ +   + M     
Sbjct: 1   MPSLMNIFGVAGSALSAQSQRLNVTASNLANADSATGPDGKPYKAKQVVFATDPMGGART 60

Query: 56  ---HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
               G GGVRV K+  D S     +DP +P A+ +G V+ PNV+ + E  +M   +R Y 
Sbjct: 61  ASGQGVGGVRVTKVIDDPSPMKSTYDPANPAADENGYVQMPNVDPVQEMVNMISASRSYQ 120

Query: 113 ANLQTIKQSHDMMTTTLDLL 132
           AN++T+  +  +M  TL + 
Sbjct: 121 ANVETLNTAKQLMLKTLTIG 140


>gi|220925380|ref|YP_002500682.1| flagellar basal body rod protein FlgC [Methylobacterium nodulans
           ORS 2060]
 gi|219949987|gb|ACL60379.1| flagellar basal-body rod protein FlgC [Methylobacterium nodulans
           ORS 2060]
          Length = 136

 Score =  113 bits (283), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 60/136 (44%), Positives = 86/136 (63%), Gaps = 4/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD++  +  IA SGL  QS RM++ISENIANA +   + G++PYRRK  +F   +     
Sbjct: 1   MDFM-KAIGIAASGLRAQSGRMRVISENIANADSEPKSAGAEPYRRKVPTFANRLDRELD 59

Query: 61  VRVK---KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
             V    ++  DQS F  + +PG+P A+A+G V+ PNVN+LVET DMRE  R Y ANL  
Sbjct: 60  ASVVELGRVRRDQSPFRTKHEPGNPAADANGEVRLPNVNLLVETVDMREAQRSYEANLNM 119

Query: 118 IKQSHDMMTTTLDLLR 133
           I  +  M++ T+D+L+
Sbjct: 120 ITAARRMISRTIDILK 135


>gi|260597443|ref|YP_003210014.1| flagellar basal body rod protein FlgC [Cronobacter turicensis
           z3032]
 gi|260216620|emb|CBA29913.1| Flagellar basal-body rod protein flgC [Cronobacter turicensis
           z3032]
          Length = 134

 Score =  113 bits (283), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 41/134 (30%), Positives = 68/134 (50%), Gaps = 2/134 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--G 59
             L+    IA S +  QS RM + + N+ANA +     G     ++ I   +   G+  G
Sbjct: 1   MALLNIFDIAGSAMTAQSKRMNVAASNLANADSATGPDGQPYRAKQVIFQVDAAPGAATG 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GV+V  +   Q+     ++PG+P+A+A G V+ PNV+V+ E  +    +R Y AN++ + 
Sbjct: 61  GVKVTDVVESQAPDKLVYEPGNPLADAKGYVRMPNVDVVGEMVNSMSASRSYQANVEVLN 120

Query: 120 QSHDMMTTTLDLLR 133
               MM  TL L +
Sbjct: 121 TVKSMMLKTLTLGQ 134


>gi|331269312|ref|YP_004395804.1| flagellar basal-body rod protein FlgC [Clostridium botulinum
           BKT015925]
 gi|329125862|gb|AEB75807.1| flagellar basal-body rod protein FlgC [Clostridium botulinum
           BKT015925]
          Length = 145

 Score =  113 bits (283), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 51/145 (35%), Positives = 68/145 (46%), Gaps = 13/145 (8%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGS-DPYRRKTISFEEVMHGS-- 58
               +S  I+ SGL+ +  RM  IS NI N +TT    G  +PYRRK   F+E       
Sbjct: 1   MNAFSSLRISASGLSAERLRMDTISSNITNFKTTRGKDGQKEPYRRKIAVFQENFKKELG 60

Query: 59  ----------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                      GV+   I  D+S     ++P HP A+  G V  PNVN+L E ADM    
Sbjct: 61  KNKKGYETSLNGVKAVGIVEDKSPLRRVYNPNHPDADKDGYVLMPNVNILNEMADMIAAT 120

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R Y AN+  I  S +M    L++ R
Sbjct: 121 RAYEANVTAINSSKNMFMKALEIGR 145


>gi|237731005|ref|ZP_04561486.1| flagellar basal body rod protein FlgC [Citrobacter sp. 30_2]
 gi|226906544|gb|EEH92462.1| flagellar basal body rod protein FlgC [Citrobacter sp. 30_2]
          Length = 134

 Score =  113 bits (283), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 40/134 (29%), Positives = 69/134 (51%), Gaps = 2/134 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--G 59
             L+    IA S L  QS R+ + + N+ANA +     G     ++ +   +   G+  G
Sbjct: 1   MALLNIFDIAGSALTAQSKRLNVAASNMANADSVSGPDGQPYRAKQVVFQVDAAPGAATG 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GV+V  +   Q+     ++PG+P+A+A+G VK PNV+V+ E  +    +R Y AN++ + 
Sbjct: 61  GVKVADVIESQAPDKLVYEPGNPLADANGYVKMPNVDVVGEMVNTMSASRSYQANVEVLN 120

Query: 120 QSHDMMTTTLDLLR 133
               +M  TL L +
Sbjct: 121 TVKSLMLKTLTLGQ 134


>gi|156934442|ref|YP_001438358.1| flagellar basal body rod protein FlgC [Cronobacter sakazakii ATCC
           BAA-894]
 gi|156532696|gb|ABU77522.1| hypothetical protein ESA_02273 [Cronobacter sakazakii ATCC BAA-894]
          Length = 134

 Score =  113 bits (283), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 40/134 (29%), Positives = 68/134 (50%), Gaps = 2/134 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--G 59
             L+    IA S +  QS RM + + N+ANA +     G     ++ +   +   G+  G
Sbjct: 1   MALLNIFDIAGSAMTAQSKRMNVAASNLANADSATGPDGQPYRAKQVVFQVDAAPGAATG 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GV+V  +   Q+     ++PG+P+A+A G V+ PNV+V+ E  +    +R Y AN++ + 
Sbjct: 61  GVKVTDVVESQAPDKLVYEPGNPLADAKGYVRMPNVDVVGEMVNSMSASRSYQANVEVLN 120

Query: 120 QSHDMMTTTLDLLR 133
               MM  TL L +
Sbjct: 121 TVKSMMLKTLTLGQ 134


>gi|193069522|ref|ZP_03050476.1| flagellar basal-body rod protein FlgC [Escherichia coli E110019]
 gi|192957270|gb|EDV87719.1| flagellar basal-body rod protein FlgC [Escherichia coli E110019]
          Length = 134

 Score =  113 bits (282), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 41/134 (30%), Positives = 66/134 (49%), Gaps = 2/134 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--G 59
             L+    IA S L  QS R+ +   N+ANA +     G     ++ +       G+  G
Sbjct: 1   MALLNIFDIAGSALTAQSQRLNVAVSNLANADSVTGPDGQPYRAKQVVFQVNAAPGAATG 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GV+V  +   Q+     ++PG+P+A+A G VK PNV+V+ E  +    +R Y AN++ + 
Sbjct: 61  GVKVADVIESQAPDKLVYEPGNPLADAKGYVKMPNVDVVGEMVNTMSASRSYQANVEVLN 120

Query: 120 QSHDMMTTTLDLLR 133
               MM  TL L +
Sbjct: 121 TVKSMMLKTLTLGQ 134


>gi|319898635|ref|YP_004158728.1| flagellar basal-body rod protein flgC [Bartonella clarridgeiae 73]
 gi|319402599|emb|CBI76144.1| Flagellar basal-body rod protein flgC [Bartonella clarridgeiae 73]
          Length = 138

 Score =  113 bits (282), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 68/135 (50%), Positives = 101/135 (74%), Gaps = 3/135 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG---S 58
           D LIA+  IA +GL+ QS R++II+EN+ANA +TG + G+ PY+RKT+SFE  ++    +
Sbjct: 3   DRLIAAEQIATTGLSAQSTRLRIIAENLANANSTGKSAGARPYQRKTVSFEATLNPYIDA 62

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
            GV VK+I  D++ F+  ++PGH  A+++G VKYPNVN ++E ADMRE NR Y ANLQ I
Sbjct: 63  QGVHVKRISTDKAPFIMRYEPGHLAADSNGYVKYPNVNSIIEMADMREANRSYEANLQVI 122

Query: 119 KQSHDMMTTTLDLLR 133
           +Q+ D+++ T+DLL+
Sbjct: 123 RQARDLVSQTIDLLK 137


>gi|217059|dbj|BAA02862.1| FlgC [Salmonella enterica subsp. enterica serovar Typhimurium]
 gi|581758|emb|CAA36310.1| unnamed protein product [Salmonella enterica subsp. enterica
           serovar Typhimurium]
          Length = 134

 Score =  113 bits (282), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 41/134 (30%), Positives = 69/134 (51%), Gaps = 2/134 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM--HGSG 59
             L+    IA S LA QS R+ + + N+ANA +     G     ++ +   +      +G
Sbjct: 1   MALLNIFDIAGSALAAQSKRLNVAASNLANADSVTGPDGQPYRAKQVVFQVDAAPGQATG 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GV+V  +   Q+     ++PG+P+A+A+G VK PNV+V+ E  +    +R Y AN++ + 
Sbjct: 61  GVKVASVIESQAPEKLVYEPGNPLADANGYVKMPNVDVVGEMVNTMSASRTYQANIEVLN 120

Query: 120 QSHDMMTTTLDLLR 133
               MM  TL L +
Sbjct: 121 TVKSMMLKTLTLGQ 134


>gi|24374760|ref|NP_718803.1| flagellar basal body rod protein FlgC [Shewanella oneidensis MR-1]
 gi|24349426|gb|AAN56247.1|AE015762_4 flagellar basal-body rod protein FlgC [Shewanella oneidensis MR-1]
          Length = 138

 Score =  113 bits (282), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 42/138 (30%), Positives = 64/138 (46%), Gaps = 6/138 (4%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-- 59
             L     +A SG++ QS R+   + NIANA +   +       R  I   E+       
Sbjct: 1   MGLFNIFDVAGSGMSAQSLRLNTTASNIANADSVSSSIDKTYRSRHPIFEAEMAKAQSQQ 60

Query: 60  ----GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
               GV VK I       ++E+ P HP+A+  G +  PNVNV+ E ADM   +R Y  N+
Sbjct: 61  QASQGVAVKGIVESDKPLLKEYSPDHPMADGDGFIYKPNVNVMEEMADMISASRSYQMNV 120

Query: 116 QTIKQSHDMMTTTLDLLR 133
           Q  + +  M+  TL + +
Sbjct: 121 QVAEAAKSMLQQTLGMGK 138


>gi|300716216|ref|YP_003741019.1| cell-proximal portion of basal-body rod [Erwinia billingiae Eb661]
 gi|299062052|emb|CAX59168.1| Cell-proximal portion of basal-body rod [Erwinia billingiae Eb661]
          Length = 134

 Score =  113 bits (282), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 40/134 (29%), Positives = 70/134 (52%), Gaps = 2/134 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM--HGSG 59
             L+    IA S +  QS R+ + + N+ANA +     G     ++ +   + +    +G
Sbjct: 1   MALLNIFDIAGSAMNAQSQRLNVSASNLANADSVTGPDGQPYVAKQVVFQTDAVPGSPTG 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GVRV ++  D +     ++PG+P+A+A G VK PNV+V+ ET +    +R Y AN++ + 
Sbjct: 61  GVRVAQVVDDPTPAKLVYEPGNPMADAKGYVKMPNVDVVGETVNTMSASRSYQANVEVLN 120

Query: 120 QSHDMMTTTLDLLR 133
               MM  TL + +
Sbjct: 121 TVKQMMMKTLTMGQ 134


>gi|152990371|ref|YP_001356093.1| flagellar basal-body rod protein FlgC [Nitratiruptor sp. SB155-2]
 gi|151422232|dbj|BAF69736.1| flagellar basal-body rod protein FlgC [Nitratiruptor sp. SB155-2]
          Length = 136

 Score =  113 bits (282), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 45/136 (33%), Positives = 71/136 (52%), Gaps = 8/136 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV-- 61
           +     ++ +GL+ Q  RM I++ N+ANA +        PYRRK   F+E++        
Sbjct: 2   IFKGLEVSQTGLSTQKYRMDIVASNMANANSI--DDNGVPYRRKIPIFQEILDKEQNRIP 59

Query: 62  ----RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
                +KK+  D S F  ++DP +P+A+ +G V+ PNV+ L E  DM    R Y ANL  
Sbjct: 60  LSKVAIKKVVEDPSPFKLKYDPNNPLADENGYVQLPNVDPLREMVDMISAMRTYEANLTA 119

Query: 118 IKQSHDMMTTTLDLLR 133
                DM+  T+D+L+
Sbjct: 120 FNTHKDMLLKTIDILK 135


>gi|227820856|ref|YP_002824826.1| flagellar basal body rod protein FlgC [Sinorhizobium fredii NGR234]
 gi|227339855|gb|ACP24073.1| flagellar basal-body rod protein FlgC [Sinorhizobium fredii NGR234]
          Length = 139

 Score =  113 bits (282), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 78/136 (57%), Positives = 102/136 (75%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD L ++  ++ SGL  +S R++I+SENIANAR+TGD PG+DPYRRKTISF   +  + G
Sbjct: 1   MDPLTSALKVSASGLQAESTRLRIVSENIANARSTGDVPGADPYRRKTISFAAEVDRASG 60

Query: 61  ---VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
              V V+++G D S F  EFDPG+P A+  G+VK PNVNVL+E ADMRE NR Y ANLQT
Sbjct: 61  ASLVEVQRLGTDDSDFSIEFDPGNPAADEKGMVKMPNVNVLIEMADMREANRAYEANLQT 120

Query: 118 IKQSHDMMTTTLDLLR 133
           +KQS D+++ T+DLLR
Sbjct: 121 VKQSRDLISQTIDLLR 136


>gi|255099413|ref|ZP_05328390.1| flagellar basal-body rod protein [Clostridium difficile QCD-63q42]
          Length = 134

 Score =  113 bits (282), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 44/134 (32%), Positives = 70/134 (52%), Gaps = 2/134 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-- 59
             + +   I+ SGL  +S +M IIS N+AN   T    G    R+     E   +  G  
Sbjct: 1   MSVFSGMRISASGLTAESLKMDIISSNVANINATRGPNGEAYRRKVVSFEENYDNKLGML 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GV+V  +  D+S   + +DP HP A  +G V+YPNVN+LVE  D+   +R Y +N+ T+ 
Sbjct: 61  GVKVTSVEDDKSPLKKVYDPSHPDAKPNGYVEYPNVNILVEMTDLITASRAYDSNVDTLN 120

Query: 120 QSHDMMTTTLDLLR 133
               M++  L++ +
Sbjct: 121 AQKSMISKALEIGK 134


>gi|283833632|ref|ZP_06353373.1| flagellar basal-body rod protein FlgC [Citrobacter youngae ATCC
           29220]
 gi|291071315|gb|EFE09424.1| flagellar basal-body rod protein FlgC [Citrobacter youngae ATCC
           29220]
          Length = 134

 Score =  113 bits (282), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 40/134 (29%), Positives = 69/134 (51%), Gaps = 2/134 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--G 59
             L+    IA S L  QS R+ + + N+ANA +     G     ++ +   +   G+  G
Sbjct: 1   MALLNIFDIAGSALTAQSKRLNVAASNMANADSVTGPDGQPYRAKQVVFQVDAAPGAATG 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GV+V  +   Q+     ++PG+P+A+A+G VK PNV+V+ E  +    +R Y AN++ + 
Sbjct: 61  GVKVADVIESQAPDKLVYEPGNPLADANGYVKMPNVDVVGEMVNTMSASRSYQANVEVLN 120

Query: 120 QSHDMMTTTLDLLR 133
               +M  TL L +
Sbjct: 121 TVKSLMLKTLTLGQ 134


>gi|83309714|ref|YP_419978.1| flagellar basal body rod protein FlgC [Magnetospirillum magneticum
           AMB-1]
 gi|82944555|dbj|BAE49419.1| Flagellar basal body rod protein [Magnetospirillum magneticum
           AMB-1]
          Length = 136

 Score =  113 bits (282), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 57/136 (41%), Positives = 81/136 (59%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD L  S   A SG+ VQS R+++ISEN+ANA +   TP   PYRRK ++F+  +  + G
Sbjct: 1   MDELSKSTQTAISGMKVQSQRLRVISENLANADSLAQTPEGLPYRRKVMTFKNELDRATG 60

Query: 61  V---RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
               +V K+  D + F   +DP HP A+  G V  PNVN L+E  DMRE  R Y AN+  
Sbjct: 61  TNVVKVDKVRADSAEFQRRYDPKHPAADRDGYVLAPNVNPLIEMMDMREAQRSYEANMNV 120

Query: 118 IKQSHDMMTTTLDLLR 133
           I  S  +++ T+++LR
Sbjct: 121 INASRSLLSRTIEMLR 136


>gi|254731831|ref|ZP_05190409.1| flagellar basal body rod protein FlgC [Brucella abortus bv. 4 str.
           292]
 gi|260759600|ref|ZP_05871948.1| flagellar basal-body rod protein FlgC [Brucella abortus bv. 4 str.
           292]
 gi|260669918|gb|EEX56858.1| flagellar basal-body rod protein FlgC [Brucella abortus bv. 4 str.
           292]
          Length = 140

 Score =  113 bits (282), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 71/136 (52%), Positives = 98/136 (72%), Gaps = 3/136 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
           D L ++  IA SGL+ QS R++I+SENIANA++T  T  +DPYRRKT+SF   +    G 
Sbjct: 4   DALQSTLKIAASGLSTQSTRLRIVSENIANAQSTARTADTDPYRRKTVSFRTELEQGTGA 63

Query: 62  ---RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
              RV ++G D S F+E++DP HP A+A G VKYPNVN++VE ADMRE NR Y ANLQ +
Sbjct: 64  AEVRVAEVGKDTSPFIEQYDPSHPAADARGYVKYPNVNMVVEMADMREANRSYEANLQVV 123

Query: 119 KQSHDMMTTTLDLLRD 134
           +Q+ ++++ T+DLLR 
Sbjct: 124 RQARELISMTIDLLRS 139


>gi|71280491|ref|YP_268220.1| flagellar basal-body rod protein FlgC [Colwellia psychrerythraea
           34H]
 gi|71146231|gb|AAZ26704.1| flagellar basal-body rod protein FlgC [Colwellia psychrerythraea
           34H]
          Length = 143

 Score =  113 bits (282), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 37/142 (26%), Positives = 59/142 (41%), Gaps = 10/142 (7%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             L     I  SG++ QS R+   + NIANA +   +       R  +    +   + G 
Sbjct: 1   MSLFNVFDITGSGMSAQSVRLNTTASNIANADSVSSSADKTYRARHPVFAAAMQEAAAGQ 60

Query: 62  ----------RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
                      V  I         E+ P HP+A+  G +  PNVNV+ E  +M   +R Y
Sbjct: 61  GKSDGSGVGVNVLGIVESDKPLNVEYAPSHPMADKDGYIYKPNVNVIEEMTNMISASRSY 120

Query: 112 MANLQTIKQSHDMMTTTLDLLR 133
             N+Q  + + +M+  TL L +
Sbjct: 121 QTNVQLAESAKNMLNKTLQLGQ 142


>gi|91776307|ref|YP_546063.1| flagellar basal-body rod protein FlgC [Methylobacillus flagellatus
           KT]
 gi|91710294|gb|ABE50222.1| flagellar basal-body rod protein FlgC [Methylobacillus flagellatus
           KT]
          Length = 135

 Score =  113 bits (282), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 39/135 (28%), Positives = 72/135 (53%), Gaps = 3/135 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-- 59
             L    +I+ S ++ Q  R+ +++ N+ANA +   + G     +  +     ++  G  
Sbjct: 1   MSLFNVFNISGSAMSAQGQRLNVVASNLANADSVTSSNGQPYRTKHIVFSAVPVNAKGDA 60

Query: 60  -GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
            GV+V++I  DQ+    ++DP HP+A+A+G V  PNVNV  E  +M   +R Y  N++T+
Sbjct: 61  QGVKVQQIVEDQAPPQLKYDPKHPLADANGYVAMPNVNVTEEMVNMISASRSYQNNVETM 120

Query: 119 KQSHDMMTTTLDLLR 133
             +  M+  TL + +
Sbjct: 121 NAAKSMLLKTLTIGQ 135


>gi|71906389|ref|YP_283976.1| flagellar basal-body rod protein FlgC [Dechloromonas aromatica RCB]
 gi|71846010|gb|AAZ45506.1| Flagellar basal-body rod protein FlgC [Dechloromonas aromatica RCB]
          Length = 137

 Score =  113 bits (281), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 38/137 (27%), Positives = 66/137 (48%), Gaps = 4/137 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-- 59
             L     +++S +  QS R+   + N+ANA +     G     ++ +     M  +G  
Sbjct: 1   MSLFNVFQVSSSAMTAQSMRLNTTASNLANADSVISADGKPYRAKQVVFEATPMGNAGDS 60

Query: 60  --GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
             GVRV++I  D S     +DP +P A+  G V +PNVNV+ E  +M   +R Y  N++ 
Sbjct: 61  SKGVRVRQIVEDASPPRLVYDPKNPAADEKGYVAFPNVNVVEEMTNMISASRSYQTNVEV 120

Query: 118 IKQSHDMMTTTLDLLRD 134
           +  +  M+  TL + + 
Sbjct: 121 MNTAKTMLLRTLSIGQS 137


>gi|254519424|ref|ZP_05131480.1| flagellar basal-body rod protein FlgC [Clostridium sp. 7_2_43FAA]
 gi|226913173|gb|EEH98374.1| flagellar basal-body rod protein FlgC [Clostridium sp. 7_2_43FAA]
          Length = 134

 Score =  113 bits (281), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 52/135 (38%), Positives = 72/135 (53%), Gaps = 4/135 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-- 59
             +  +  I+ SGL+ +  RM  I+ NI NA TT    G  PY RK   F+E +  +   
Sbjct: 1   MGIFNTMRISASGLSAERLRMDTITSNITNATTTRGEDGK-PYVRKIAVFQENLDKANKL 59

Query: 60  -GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
            GV+  +I  D+S     +DP HP AN  G V  PNVN+L E AD+   +R Y AN+ T+
Sbjct: 60  NGVKAVEIVEDESPLKSVYDPTHPDANEDGYVTMPNVNLLNEMADIIAASRAYEANVDTL 119

Query: 119 KQSHDMMTTTLDLLR 133
             S  M T +L+L R
Sbjct: 120 NASKSMFTKSLELGR 134


>gi|170768138|ref|ZP_02902591.1| flagellar basal-body rod protein FlgC [Escherichia albertii
           TW07627]
 gi|170122904|gb|EDS91835.1| flagellar basal-body rod protein FlgC [Escherichia albertii
           TW07627]
          Length = 134

 Score =  113 bits (281), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 40/134 (29%), Positives = 66/134 (49%), Gaps = 2/134 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--G 59
             L+    IA S L  QS R+ + + N+ANA +     G     ++ +       G+  G
Sbjct: 1   MALLNIFDIAGSALTAQSQRLNVAASNLANADSVTGPDGQPYRAKQVVFQVNAAPGAATG 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GV+V  +   Q+     ++PG+P+A+A G VK PNV+V+ E  +    +R Y AN++ + 
Sbjct: 61  GVKVADVIESQAPDKWVYEPGNPLADAKGYVKMPNVDVVGEMVNTMSASRSYQANVEVLN 120

Query: 120 QSHDMMTTTLDLLR 133
               MM   L L +
Sbjct: 121 TVKSMMLKNLTLGQ 134


>gi|332525068|ref|ZP_08401248.1| flagellar basal-body rod protein FlgC [Rubrivivax benzoatilyticus
           JA2]
 gi|332108357|gb|EGJ09581.1| flagellar basal-body rod protein FlgC [Rubrivivax benzoatilyticus
           JA2]
          Length = 139

 Score =  113 bits (281), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 38/139 (27%), Positives = 64/139 (46%), Gaps = 6/139 (4%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH----- 56
             +     ++ S ++ QS R+ +++ N+ANA T     G     R+ +    +M      
Sbjct: 1   MSMFRIFDVSGSAVSAQSQRLNVVASNLANADTVAGPDGQAYKARQVVFQTALMDAGADP 60

Query: 57  -GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
             + GVRV  I  D S      DP HP A+A G V + NVN + E  DM   +R Y  N+
Sbjct: 61  ASAAGVRVSTIREDASPGRRVHDPKHPAADAEGYVTFSNVNAVQEMVDMISASRSYQNNV 120

Query: 116 QTIKQSHDMMTTTLDLLRD 134
           + +  +  ++  TL + + 
Sbjct: 121 EVMNTAKTLLQKTLQMGQS 139


>gi|239817167|ref|YP_002946077.1| flagellar basal-body rod protein FlgC [Variovorax paradoxus S110]
 gi|239803744|gb|ACS20811.1| flagellar basal-body rod protein FlgC [Variovorax paradoxus S110]
          Length = 138

 Score =  113 bits (281), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 40/131 (30%), Positives = 65/131 (49%), Gaps = 2/131 (1%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV--MHGSGGVR 62
           +    +A S +A QS RM + + N+ANA +     G     ++ +   +       GGV+
Sbjct: 8   MNIFSVAGSAMAAQSQRMNVTASNLANAESVAGPDGKPYRAKQVVFEVDASGQQDIGGVK 67

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
           V  +  D S     FDP +P A+A G V  PNVNV+ E  +M   +R Y AN++ +  + 
Sbjct: 68  VAGVIEDPSPLKMVFDPKNPHADAKGYVAMPNVNVVEEMTNMISASRSYQANVEVLNTAK 127

Query: 123 DMMTTTLDLLR 133
            +M  TL + +
Sbjct: 128 TLMVKTLSIGQ 138


>gi|1086559|gb|AAB68966.1| FlgC [Agrobacterium tumefaciens]
 gi|2459712|gb|AAB71788.1| FlgC [Agrobacterium tumefaciens]
          Length = 139

 Score =  113 bits (281), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 78/136 (57%), Positives = 107/136 (78%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD L A++ ++ SGL VQS R++I+SENIANAR+TGDTPG+DPYRRKT++F   +    G
Sbjct: 1   MDPLSAASKMSGSGLEVQSTRLRIVSENIANARSTGDTPGADPYRRKTVTFGSELDHVSG 60

Query: 61  V---RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           V   +VKK+GVD+  FV E+DPG+P A+ +G+VK PNVNV++E ADMRE NR Y ANLQ 
Sbjct: 61  VERVKVKKLGVDRGDFVHEYDPGNPAADTNGMVKMPNVNVVIEMADMREANRSYDANLQV 120

Query: 118 IKQSHDMMTTTLDLLR 133
           I+Q+ D++ +T+DLL+
Sbjct: 121 IRQTRDLVASTIDLLK 136


>gi|322832562|ref|YP_004212589.1| flagellar basal-body rod protein FlgC [Rahnella sp. Y9602]
 gi|321167763|gb|ADW73462.1| flagellar basal-body rod protein FlgC [Rahnella sp. Y9602]
          Length = 134

 Score =  113 bits (281), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 38/134 (28%), Positives = 70/134 (52%), Gaps = 2/134 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM--HGSG 59
             ++    IA S LA QS R+ + + N+ANA +     G     ++ +   +      +G
Sbjct: 1   MSMLGIFDIAGSALAAQSQRLNVSASNMANADSVTGPDGKPYKAKQVVFQVDAAPGQETG 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GV+V ++  D +     ++PG+P+A+A G V+ PNV+V+ E  +    +R Y AN++ + 
Sbjct: 61  GVKVAQVVDDPAPMRMVYEPGNPMADAKGYVQMPNVDVVSEMVNTISASRSYQANVEVLN 120

Query: 120 QSHDMMTTTLDLLR 133
            +  +M  TL L +
Sbjct: 121 TTKSLMMKTLTLGQ 134


>gi|88799019|ref|ZP_01114600.1| flagellar basal-body rod protein FlgC [Reinekea sp. MED297]
 gi|88778246|gb|EAR09440.1| flagellar basal-body rod protein FlgC [Reinekea sp. MED297]
          Length = 146

 Score =  113 bits (281), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 38/146 (26%), Positives = 61/146 (41%), Gaps = 14/146 (9%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE--------- 52
             L     I+ SG+  QS R+   + N+ANA++   +       RK +            
Sbjct: 1   MSLGNVFDISGSGMNAQSIRLNTTASNLANAQSVSSSIDETYRARKPVFQHIQSQYIDRS 60

Query: 53  -----EVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                       GV V  I    +     ++P HP+A+  G V YPNVNV+ E ADM   
Sbjct: 61  LVPVDMDYDVGNGVEVAAIVEKDAPLEIRYEPTHPMADEEGYVYYPNVNVVEEMADMMSA 120

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
           +R +  N++    +  +M  TL + +
Sbjct: 121 SRSFTVNVEVFNTAKTLMQKTLTMGK 146


>gi|331006032|ref|ZP_08329374.1| Flagellar basal-body rod protein FlgC [gamma proteobacterium
           IMCC1989]
 gi|330420161|gb|EGG94485.1| Flagellar basal-body rod protein FlgC [gamma proteobacterium
           IMCC1989]
          Length = 140

 Score =  113 bits (281), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 39/140 (27%), Positives = 62/140 (44%), Gaps = 8/140 (5%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS--------FEE 53
             L +   IA SG+  QS R+   + N+ANA     +       R  +          + 
Sbjct: 1   MSLDSVFSIAGSGMNAQSLRLNTTASNLANADAAASSIDETYRGRHPVFASLKDTLSMDS 60

Query: 54  VMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
             + S GV V  I    +     ++PGHP++N  G V YPNVNV+ E  +M   +R +  
Sbjct: 61  NGNASVGVGVLGIVESDAPLQPRYEPGHPLSNEEGYVFYPNVNVVEEMTNMISASRSFQI 120

Query: 114 NLQTIKQSHDMMTTTLDLLR 133
           N++ +  +  MM   L L +
Sbjct: 121 NVEVMNSAKQMMQRALTLGK 140


>gi|255021352|ref|ZP_05293400.1| Flagellar basal-body rod protein flgC [Acidithiobacillus caldus
           ATCC 51756]
 gi|254969215|gb|EET26729.1| Flagellar basal-body rod protein flgC [Acidithiobacillus caldus
           ATCC 51756]
          Length = 138

 Score =  113 bits (281), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 38/137 (27%), Positives = 65/137 (47%), Gaps = 6/137 (4%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-- 59
             L +   +A+S L  QS R+ +++ N+ANA +   + G     R+ +     +H     
Sbjct: 1   MSLFSVLDVASSALTAQSYRLNVVASNLANANSATSSDGQPYRAREVVFAATPLHSGQAP 60

Query: 60  ----GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
               GV+V  +          ++PG+P ANA G V+ PNVN + E  +M   +R Y AN+
Sbjct: 61  AGVEGVQVAGVVEKPGPLKLVYEPGNPAANAEGYVQMPNVNPVDEMVNMISASRAYQANV 120

Query: 116 QTIKQSHDMMTTTLDLL 132
             +  +  ++  TL L 
Sbjct: 121 NVMNTTKALLQKTLTLG 137


>gi|95929847|ref|ZP_01312588.1| flagellar basal-body rod protein FlgC [Desulfuromonas acetoxidans
           DSM 684]
 gi|95134143|gb|EAT15801.1| flagellar basal-body rod protein FlgC [Desulfuromonas acetoxidans
           DSM 684]
          Length = 143

 Score =  113 bits (281), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 46/143 (32%), Positives = 67/143 (46%), Gaps = 11/143 (7%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--- 58
             +  S +I++S L  Q  R+  IS N+ANA TT    G    R+  +     +  +   
Sbjct: 1   MDIFTSLNISSSALKAQRIRLDTISSNMANAETTRTPEGGPYRRKMVVFEPAQVSFADHL 60

Query: 59  --------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRL 110
                    GV+V +I  + S     FDP HP AN  G V  PN+++L ET DM    R 
Sbjct: 61  SAKEKKALNGVQVSQIVTEDSEPRLIFDPSHPDANDQGYVALPNIDLLKETTDMMLATRA 120

Query: 111 YMANLQTIKQSHDMMTTTLDLLR 133
           Y AN+ TIK +  M    L++ +
Sbjct: 121 YEANITTIKSAKRMALKALEIGK 143


>gi|229918625|ref|YP_002887271.1| flagellar basal-body rod protein FlgC [Exiguobacterium sp. AT1b]
 gi|229470054|gb|ACQ71826.1| flagellar basal-body rod protein FlgC [Exiguobacterium sp. AT1b]
          Length = 142

 Score =  113 bits (281), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 45/141 (31%), Positives = 69/141 (48%), Gaps = 9/141 (6%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDT---PGSDPYRRKTISFEEVM--- 55
             +  S HI+ S L  Q  RM  +S NIANA+TT          PY RK    +E     
Sbjct: 1   MGMFDSFHISASALTSQRLRMDTVSANIANAQTTRGKLVDGEWQPYTRKMTVLQEAPFRK 60

Query: 56  ---HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
                +GGV+V +I  D + +   ++P HP A+  G V+ PNV++L E  D+    R Y 
Sbjct: 61  RLDAVNGGVQVSQIIEDDAPYKLVYNPNHPDADERGYVQMPNVDLLKEMVDLMGATRSYE 120

Query: 113 ANLQTIKQSHDMMTTTLDLLR 133
           AN+  +  S  M+   +++ +
Sbjct: 121 ANIAAMNASKAMLVKAMEIGK 141


>gi|319790422|ref|YP_004152055.1| flagellar basal-body rod protein FlgC [Thermovibrio ammonificans
           HB-1]
 gi|317114924|gb|ADU97414.1| flagellar basal-body rod protein FlgC [Thermovibrio ammonificans
           HB-1]
          Length = 135

 Score =  113 bits (281), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 46/135 (34%), Positives = 68/135 (50%), Gaps = 7/135 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR- 62
           +     ++ +G+  Q  RM + + N+ANA +        PYRR+   FE V+    GV+ 
Sbjct: 2   IFKGLEVSVTGMLAQRVRMDVAASNLANANSV--DDNGQPYRRRVPIFEAVLDEVNGVKT 59

Query: 63  ----VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
               VKKI  D S F + +DP +P+A   G V  PNV+ L E  DM    R Y ANL   
Sbjct: 60  YRVKVKKIVEDPSPFRKIYDPSNPLAGPDGYVTLPNVDPLREMVDMISAMRSYEANLTAF 119

Query: 119 KQSHDMMTTTLDLLR 133
               +M+  T+D+L+
Sbjct: 120 NTRKNMIVNTIDILK 134


>gi|170743258|ref|YP_001771913.1| flagellar basal body rod protein FlgC [Methylobacterium sp. 4-46]
 gi|168197532|gb|ACA19479.1| flagellar basal-body rod protein FlgC [Methylobacterium sp. 4-46]
          Length = 136

 Score =  112 bits (280), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 60/136 (44%), Positives = 85/136 (62%), Gaps = 4/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD++  +  IA SGL  QS RM++ISENIANA +     G +PYRRK  +F   +     
Sbjct: 1   MDFM-KAIGIAASGLRAQSGRMRVISENIANADSEPTRAGVEPYRRKVPTFANRLDRELD 59

Query: 61  VRVK---KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
            R+    ++  DQ+ F  + DPG+PVA+A G V+ PNVN+LVET DMRE  R Y ANL  
Sbjct: 60  ARMVDLGRVRRDQAPFRTKHDPGNPVADAKGDVQLPNVNLLVETVDMREAQRSYEANLNM 119

Query: 118 IKQSHDMMTTTLDLLR 133
           +  +  M++ T+D+L+
Sbjct: 120 VTAARRMISRTIDILK 135


>gi|295111496|emb|CBL28246.1| flagellar basal-body rod protein FlgC [Synergistetes bacterium
           SGP1]
          Length = 139

 Score =  112 bits (280), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 44/135 (32%), Positives = 61/135 (45%), Gaps = 6/135 (4%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR-- 62
             S  +A S L      M  IS N+AN  TT    G    RR  +  E +    GG R  
Sbjct: 4   FDSMEVAGSALTAHRLWMDTISSNLANINTTRTLSGGPYKRRVPVFAEMLDRTIGGYRDI 63

Query: 63  ----VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
               V  I  D++     + P HP A+  G V YPNVN++ E  DM   +R Y ANL  +
Sbjct: 64  GGVRVTAITEDRTAPRMTYQPDHPDADKDGYVAYPNVNLVREMTDMLVASRAYEANLSVV 123

Query: 119 KQSHDMMTTTLDLLR 133
             + +M    L+++R
Sbjct: 124 TTAREMWNGALEVMR 138


>gi|183220163|ref|YP_001838159.1| flagellar basal body rod protein FlgC [Leptospira biflexa serovar
           Patoc strain 'Patoc 1 (Paris)']
 gi|189910283|ref|YP_001961838.1| flagellar basal body rod protein FlgC [Leptospira biflexa serovar
           Patoc strain 'Patoc 1 (Ames)']
 gi|167774959|gb|ABZ93260.1| Endoflagellar proximal basal body rod protein [Leptospira biflexa
           serovar Patoc strain 'Patoc 1 (Ames)']
 gi|167778585|gb|ABZ96883.1| Flagellar basal-body rod protein FlgC [Leptospira biflexa serovar
           Patoc strain 'Patoc 1 (Paris)']
          Length = 153

 Score =  112 bits (280), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 51/152 (33%), Positives = 71/152 (46%), Gaps = 20/152 (13%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKT------------- 48
             +  S +I+ +GL+ Q  RM +IS NIAN+ TT +T G  P+RR               
Sbjct: 1   MGMFDSINISATGLSAQRLRMDVISNNIANSTTTRNTNGDGPFRRDRVILTPINLRTQWK 60

Query: 49  ---ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVA----NASGIVKYPNVNVLVET 101
                F        GV+V KI  D S     +DP HP A       G V+ PN+N++ E 
Sbjct: 61  SPVYPFGVAPGEGKGVKVMKIEKDMSPLRLTYDPTHPDAIQTGPKKGYVELPNINIVTEM 120

Query: 102 ADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            DM   +R Y AN+Q I  S  MM   +++ R
Sbjct: 121 TDMISASRSYEANVQLINGSKAMMNKAMEIGR 152


>gi|83720057|ref|YP_440799.1| flagellar basal body rod protein FlgC [Burkholderia thailandensis
           E264]
 gi|167579486|ref|ZP_02372360.1| flagellar basal body rod protein FlgC [Burkholderia thailandensis
           TXDOH]
 gi|167617583|ref|ZP_02386214.1| flagellar basal body rod protein FlgC [Burkholderia thailandensis
           Bt4]
 gi|257140550|ref|ZP_05588812.1| flagellar basal body rod protein FlgC [Burkholderia thailandensis
           E264]
 gi|83653882|gb|ABC37945.1| flagellar basal-body rod protein FlgC [Burkholderia thailandensis
           E264]
          Length = 141

 Score =  112 bits (280), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 40/140 (28%), Positives = 68/140 (48%), Gaps = 8/140 (5%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM----- 55
           M  L+    +A S ++ QS R+ + + N+ANA +     G     ++ +     M     
Sbjct: 1   MPSLMNIFDVAGSAMSAQSQRLNVTASNLANADSVTGPDGKPYKAKQVVFATAPMGGART 60

Query: 56  ---HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
               G GGV+V K+  D S     +DP +P A+ +G V  PNV+ + E  +M   +R Y 
Sbjct: 61  ASGQGVGGVQVTKVIDDPSPMKTTYDPSNPAADQNGYVTMPNVDPVQEMVNMISASRSYQ 120

Query: 113 ANLQTIKQSHDMMTTTLDLL 132
           AN++T+  +  +M  TL + 
Sbjct: 121 ANVETLNTAKQLMLKTLTIG 140


>gi|167465320|ref|ZP_02330409.1| flagellar basal body rod protein FlgC [Paenibacillus larvae subsp.
           larvae BRL-230010]
          Length = 149

 Score =  112 bits (280), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 48/149 (32%), Positives = 68/149 (45%), Gaps = 17/149 (11%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDT---PGSDPYRRKTISFEEVMHGS 58
             L     I++S L  Q  RM +IS NIANA +T          PY+RK +  E     +
Sbjct: 1   MRLTNGFDISSSALTAQRLRMDVISSNIANADSTRGKFVDGKWVPYQRKMVVVEPKNQTN 60

Query: 59  --------------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
                          GVRV  I  DQ+ F   ++P HP ++A G V  PNV++  E  DM
Sbjct: 61  FAQNLQNAMKNGTGQGVRVSNIVGDQTPFKRVYNPVHPDSDADGYVYMPNVDIQKEMVDM 120

Query: 105 RETNRLYMANLQTIKQSHDMMTTTLDLLR 133
               R Y AN+  +  +  M+T  L++ R
Sbjct: 121 ISATRSYEANVTALNATKGMITKALEIGR 149


>gi|167835109|ref|ZP_02461992.1| flagellar basal body rod protein FlgC [Burkholderia thailandensis
           MSMB43]
          Length = 141

 Score =  112 bits (280), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 40/140 (28%), Positives = 68/140 (48%), Gaps = 8/140 (5%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM----- 55
           M  L+    +A S ++ QS R+ + + N+ANA +     G     ++ +     M     
Sbjct: 1   MPSLMNIFDVAGSAMSAQSQRLNVTASNLANADSVTGPDGKPYKAKQVVFATAPMGRART 60

Query: 56  ---HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
               G GGV+V K+  D S     +DP +P A+ +G V  PNV+ + E  +M   +R Y 
Sbjct: 61  ASGQGVGGVQVTKVVDDPSPMKTTYDPSNPAADQNGYVTMPNVDPVQEMVNMISASRSYQ 120

Query: 113 ANLQTIKQSHDMMTTTLDLL 132
           AN++T+  +  +M  TL + 
Sbjct: 121 ANVETLNTAKQLMLKTLTIG 140


>gi|126697817|ref|YP_001086714.1| flagellar basal-body rod protein [Clostridium difficile 630]
 gi|254973910|ref|ZP_05270382.1| flagellar basal-body rod protein [Clostridium difficile QCD-66c26]
 gi|255091296|ref|ZP_05320774.1| flagellar basal-body rod protein [Clostridium difficile CIP 107932]
 gi|255305270|ref|ZP_05349442.1| flagellar basal-body rod protein [Clostridium difficile ATCC 43255]
 gi|255312954|ref|ZP_05354537.1| flagellar basal-body rod protein [Clostridium difficile QCD-76w55]
 gi|255515713|ref|ZP_05383389.1| flagellar basal-body rod protein [Clostridium difficile QCD-97b34]
 gi|255648807|ref|ZP_05395709.1| flagellar basal-body rod protein [Clostridium difficile QCD-37x79]
 gi|306518922|ref|ZP_07405269.1| flagellar basal body rod protein FlgC [Clostridium difficile
           QCD-32g58]
 gi|115249254|emb|CAJ67067.1| Flagellar basal-body rod protein FlgC [Clostridium difficile]
          Length = 134

 Score =  112 bits (280), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 45/134 (33%), Positives = 70/134 (52%), Gaps = 2/134 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-- 59
             + +   I+ SGL  +S +M IIS N+AN   T    G    R+     E   +  G  
Sbjct: 1   MSVFSGMRISASGLTAESLKMDIISSNVANINATRGPNGEAYRRKVVSFEENYDNKLGML 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GV+V  +  D+S   E +DP HP A  +G V+YPNVN+LVE  D+   +R Y +N+ T+ 
Sbjct: 61  GVKVTSVEDDKSPLKEVYDPSHPDAKPNGYVEYPNVNILVEMTDLITASRAYDSNVDTLN 120

Query: 120 QSHDMMTTTLDLLR 133
               M++  L++ +
Sbjct: 121 AQKSMISKALEIGK 134


>gi|167585192|ref|ZP_02377580.1| flagellar basal-body rod protein FlgC [Burkholderia ubonensis Bu]
          Length = 141

 Score =  112 bits (280), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 43/140 (30%), Positives = 70/140 (50%), Gaps = 8/140 (5%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM----- 55
           M  L+    +A S L+ QS R+ + + NIANA +     G     ++ +   +       
Sbjct: 1   MPSLMNIFGVAGSALSAQSQRLNVTASNIANADSATGPDGKPYKAKQVVFAADPQGRART 60

Query: 56  ---HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
               G GGVRV K+  D S     +DP +P A+A+G V+ PNV+ + E  +M   +R Y 
Sbjct: 61  ASGQGVGGVRVAKVIDDPSPMKSTYDPANPAADANGYVQMPNVDPVQEMVNMISASRSYQ 120

Query: 113 ANLQTIKQSHDMMTTTLDLL 132
           AN++T+  +  +M  TL + 
Sbjct: 121 ANVETLNTAKQLMLKTLTIG 140


>gi|254504860|ref|ZP_05117011.1| flagellar basal-body rod protein FlgC [Labrenzia alexandrii DFL-11]
 gi|222440931|gb|EEE47610.1| flagellar basal-body rod protein FlgC [Labrenzia alexandrii DFL-11]
          Length = 138

 Score =  112 bits (280), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 73/136 (53%), Positives = 93/136 (68%), Gaps = 3/136 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
           D L A+  IA SGL  QS RM+I+SEN+ANAR+TG+  G DPYRRKTI+FE   +     
Sbjct: 3   DPLSATLQIAASGLKAQSDRMRIVSENLANARSTGEASGDDPYRRKTITFESEFNRVTQA 62

Query: 62  R---VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
               VK IG D++ F  E+DPGHP A+  G VK PNVN L+E ADMRETNR Y ANL+ +
Sbjct: 63  NLVAVKGIGTDKAPFTVEYDPGHPAADVDGYVKMPNVNTLMELADMRETNRTYEANLKVM 122

Query: 119 KQSHDMMTTTLDLLRD 134
            Q+ +M+   +DLLR+
Sbjct: 123 TQAREMVMRHIDLLRN 138


>gi|145298489|ref|YP_001141330.1| flagellar basal body rod protein FlgC [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|142851261|gb|ABO89582.1| flagellar basal body rod protein FlgC [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 139

 Score =  112 bits (279), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 40/139 (28%), Positives = 69/139 (49%), Gaps = 6/139 (4%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-- 59
             L     IA S ++ QS R+  ++ N+ANA +   +     + R+ I   ++       
Sbjct: 1   MSLFKVFDIAGSAMSAQSVRLNTVASNMANADSVSSSVEKTYHARRPIFAAQLDQAMSDK 60

Query: 60  ----GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
               GV VK I   ++  ++E++P HP+A+  G +  PNVN++ E ADM   +R Y  N+
Sbjct: 61  QSSVGVEVKGIVESKAPLLKEYNPNHPMADDDGYIFKPNVNMVEEMADMINASRSYQTNV 120

Query: 116 QTIKQSHDMMTTTLDLLRD 134
           Q    +  M+  TL+L + 
Sbjct: 121 QVADSAKKMLQQTLNLGKS 139


>gi|75675326|ref|YP_317747.1| flagellar basal body rod protein FlgC [Nitrobacter winogradskyi
           Nb-255]
 gi|74420196|gb|ABA04395.1| Flagellar basal-body rod protein FlgC [Nitrobacter winogradskyi
           Nb-255]
          Length = 141

 Score =  112 bits (279), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 62/135 (45%), Positives = 82/135 (60%), Gaps = 3/135 (2%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
             + S  IA SGL  Q+ RM++ISENIANA +T   PG DPYRRK  +F   +  +   +
Sbjct: 7   DFMRSMSIATSGLRAQAGRMRVISENIANANSTAQAPGGDPYRRKVPTFSSALDRALDAK 66

Query: 63  VK---KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           V    ++  D STF  + +PG+P A+ SG VKYPNVN LVE  DMR+  R Y ANL  I 
Sbjct: 67  VVTLGRVRPDTSTFRIKHEPGNPAADTSGNVKYPNVNPLVEMTDMRDAQRSYEANLNIIS 126

Query: 120 QSHDMMTTTLDLLRD 134
            +  M+  TLD+L+ 
Sbjct: 127 ATRRMIQRTLDILKS 141


>gi|259907632|ref|YP_002647988.1| Flagellar basal-body rod protein, FlgC [Erwinia pyrifoliae Ep1/96]
 gi|224963254|emb|CAX54738.1| Flagellar basal-body rod protein, FlgC [Erwinia pyrifoliae Ep1/96]
 gi|283477474|emb|CAY73390.1| Flagellar basal-body rod protein flgC [Erwinia pyrifoliae DSM
           12163]
 gi|310764862|gb|ADP09812.1| Flagellar basal-body rod protein, FlgC [Erwinia sp. Ejp617]
          Length = 134

 Score =  112 bits (279), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 38/134 (28%), Positives = 67/134 (50%), Gaps = 2/134 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM--HGSG 59
             L +   I+ S +A QS R+ + + N+ANA +     G     R+     +    +  G
Sbjct: 1   MSLFSVFDISGSAMAAQSKRLNVSASNMANADSVVGPDGQPYRARQVTFEVDAAAGNEIG 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GV+V ++    +     ++PG+P+A+  G V+ PNVNV+ E  +    +R Y AN++ + 
Sbjct: 61  GVKVGEVVESSAPDRLVYEPGNPLADQQGYVRMPNVNVVDEMVNTLSASRSYQANVEVMN 120

Query: 120 QSHDMMTTTLDLLR 133
            +  MM  TL L +
Sbjct: 121 SAKAMMLKTLSLGQ 134


>gi|289548424|ref|YP_003473412.1| flagellar basal-body rod protein FlgC [Thermocrinis albus DSM
           14484]
 gi|289182041|gb|ADC89285.1| flagellar basal-body rod protein FlgC [Thermocrinis albus DSM
           14484]
          Length = 137

 Score =  112 bits (279), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 45/139 (32%), Positives = 66/139 (47%), Gaps = 8/139 (5%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG- 59
           M  +     ++ SG+  Q  R+ +I+ N+AN  +   T   +PYRR    FE V      
Sbjct: 1   MMEVFKVFEVSASGMYAQRVRINVIASNLANYESY--TREGEPYRRLEPVFEAVETPGNL 58

Query: 60  -----GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
                 VRV +I    + F   FDP +P A+  G V+ PNV+V  E  DM    R Y AN
Sbjct: 59  SKGLVPVRVVEIRRSDAPFRLLFDPTNPRADRDGFVRLPNVDVTAEMVDMLSALRSYEAN 118

Query: 115 LQTIKQSHDMMTTTLDLLR 133
           L     + +++  TL+L R
Sbjct: 119 LTAFNATKEIVQRTLELWR 137


>gi|212639569|ref|YP_002316089.1| flagellar basal body rod protein FlgC [Anoxybacillus flavithermus
           WK1]
 gi|212561049|gb|ACJ34104.1| Flagellar basal body rod protein FlgC [Anoxybacillus flavithermus
           WK1]
          Length = 145

 Score =  112 bits (279), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 46/145 (31%), Positives = 70/145 (48%), Gaps = 15/145 (10%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGD---TPGSDPYRRKTISFEEVMHGS-- 58
           +  S +++ S L  Q  RM +IS N+AN  TT          PYRRK +  +     S  
Sbjct: 1   MFQSFNVSASALTAQRLRMDVISANMANVDTTRAKMVDGKWQPYRRKMVVMQPNESFSSF 60

Query: 59  ----------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                     GGV+V +I  DQ+ F   +DP HP A+ +G V+ PNV+ L E  D+    
Sbjct: 61  LNQAMNERSTGGVKVTEIIEDQTPFKLVYDPSHPDADENGYVQLPNVDPLKEMVDLMSAT 120

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R Y AN+  +  +  M+   L++ +
Sbjct: 121 RSYEANVTVLNATKGMLMKALEIGK 145


>gi|311992325|gb|ADQ26736.1| proximal rod protein [Aeromonas hydrophila]
          Length = 138

 Score =  112 bits (279), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 41/138 (29%), Positives = 70/138 (50%), Gaps = 6/138 (4%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG----- 57
            L     IA S ++ QS R+  ++ N+ANA +   +     + R+ I   ++        
Sbjct: 1   SLFKVFDIAGSAMSAQSVRLNTVASNMANADSVSSSVEKTYHARRPIFAAQLDQAMSDKQ 60

Query: 58  -SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
            S GV VK I   ++  ++E++P HP+A+  G +  PNVN++ E ADM   +R Y  N+Q
Sbjct: 61  ASAGVEVKGIVESEAPLLKEYNPNHPMADKDGFIFKPNVNMVEEMADMINASRSYQTNVQ 120

Query: 117 TIKQSHDMMTTTLDLLRD 134
               +  M+  TL+L + 
Sbjct: 121 VADSAKKMLQQTLNLGKS 138


>gi|254292929|ref|YP_003058952.1| flagellar basal-body rod protein FlgC [Hirschia baltica ATCC 49814]
 gi|254041460|gb|ACT58255.1| flagellar basal-body rod protein FlgC [Hirschia baltica ATCC 49814]
          Length = 138

 Score =  112 bits (279), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 56/134 (41%), Positives = 83/134 (61%), Gaps = 3/134 (2%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV- 61
            L+++   A SGL  Q+ R+++ +EN+ANA +TGDTPG+DPY+RK   F+  +    G  
Sbjct: 4   DLMSAMSSAASGLRAQTVRIRVSAENLANANSTGDTPGADPYQRKVPVFKNYLDRESGAE 63

Query: 62  --RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
             +V  +  D + F  +FDP HP A+  G+VKY NV+ LVE  DMRE  R Y ANL  ++
Sbjct: 64  RVKVSGVHNDTAPFTVKFDPTHPAADEGGMVKYSNVSALVEMTDMREAQRAYEANLNVVE 123

Query: 120 QSHDMMTTTLDLLR 133
            S  M+   +D+L+
Sbjct: 124 ASRSMLLAAVDILK 137


>gi|91792662|ref|YP_562313.1| flagellar basal body rod protein FlgC [Shewanella denitrificans
           OS217]
 gi|91714664|gb|ABE54590.1| flagellar basal-body rod protein FlgC [Shewanella denitrificans
           OS217]
          Length = 138

 Score =  112 bits (279), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 41/138 (29%), Positives = 66/138 (47%), Gaps = 6/138 (4%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF------EEVM 55
             L     ++ SG+A QS R+   + NIANA +   +       R  I         +  
Sbjct: 1   MSLFNIFDVSGSGMAAQSIRLNTTASNIANADSVSSSVDKTYRARHPIFEAELNKAHDQQ 60

Query: 56  HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
           +G+ GV+V+ I       ++E+ P HP+A+  G +  PNVNV+ E ADM   +R Y  N+
Sbjct: 61  NGTKGVQVRAIVESDKPLLKEYSPSHPMADGDGFIYKPNVNVMEEMADMISASRSYQMNV 120

Query: 116 QTIKQSHDMMTTTLDLLR 133
           Q    +  M+  TL + +
Sbjct: 121 QVADATKTMLQQTLRMGK 138


>gi|163781740|ref|ZP_02176740.1| flagellar biosynthesis FlgC [Hydrogenivirga sp. 128-5-R1-1]
 gi|159882960|gb|EDP76464.1| flagellar biosynthesis FlgC [Hydrogenivirga sp. 128-5-R1-1]
          Length = 137

 Score =  111 bits (278), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 43/137 (31%), Positives = 65/137 (47%), Gaps = 4/137 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGS----DPYRRKTISFEEVMH 56
           M+ L  +  I+ SG+  Q  RM  ++ N+AN      T       +   +   + E V  
Sbjct: 1   MNDLFRTFEISASGMYAQRLRMNTVASNLANYEAYKQTGEPFRKLEVVFQAIYNPERVKK 60

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
           G   V V +I    + F   +DP +P A+A G V+ PNV+++ E ADM    R Y ANL 
Sbjct: 61  GEIPVAVTQIRESDAPFKVIYDPDNPRADARGYVRLPNVDLVKEMADMISAVRSYEANLN 120

Query: 117 TIKQSHDMMTTTLDLLR 133
               + DM   T++L R
Sbjct: 121 AFNLTKDMANRTIELWR 137


>gi|254246963|ref|ZP_04940284.1| Flagellar basal-body rod protein FlgC [Burkholderia cenocepacia
           PC184]
 gi|124871739|gb|EAY63455.1| Flagellar basal-body rod protein FlgC [Burkholderia cenocepacia
           PC184]
          Length = 141

 Score =  111 bits (278), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 42/140 (30%), Positives = 71/140 (50%), Gaps = 8/140 (5%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM----- 55
           M  L+    +A S L+ QS R+ + + N+ANA +     G     ++ +   + +     
Sbjct: 1   MPSLMNIFGVAGSALSAQSQRLNVTASNLANADSATGPDGKPYKAKQVVFATDPLGGART 60

Query: 56  ---HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
               G GGVRV K+  D S     +DP +P A+A+G V+ PNV+ + E  +M   +R Y 
Sbjct: 61  ASGQGVGGVRVTKVMDDPSPMKSTYDPANPAADANGYVQMPNVDPVQEMVNMISASRSYQ 120

Query: 113 ANLQTIKQSHDMMTTTLDLL 132
           AN++T+  +  +M  TL + 
Sbjct: 121 ANVETLNTAKTLMLKTLTIG 140


>gi|330830305|ref|YP_004393257.1| flagellar basal-body rod protein FlgC [Aeromonas veronii B565]
 gi|328805441|gb|AEB50640.1| Flagellar basal-body rod protein FlgC [Aeromonas veronii B565]
          Length = 139

 Score =  111 bits (278), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 39/139 (28%), Positives = 69/139 (49%), Gaps = 6/139 (4%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-- 59
             L     IA S ++ QS R+  ++ N+ANA +   +  +  + R+ +   ++       
Sbjct: 1   MSLFKVFDIAGSAMSAQSVRLNTVASNMANADSVSSSVENTYHARRPVFAAQLDQAMSDK 60

Query: 60  ----GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
               GV VK I   ++  ++E++P HP+A+  G +  PNVN++ E ADM   +R Y  N+
Sbjct: 61  QGSVGVEVKGIVESKAPLLKEYNPNHPMADKDGFIFKPNVNMVEEMADMINASRSYQTNV 120

Query: 116 QTIKQSHDMMTTTLDLLRD 134
           Q    +  M+  TL L + 
Sbjct: 121 QVADSAKKMLQQTLQLGKS 139


>gi|117919770|ref|YP_868962.1| flagellar basal body rod protein FlgC [Shewanella sp. ANA-3]
 gi|117612102|gb|ABK47556.1| flagellar basal-body rod protein FlgC [Shewanella sp. ANA-3]
          Length = 138

 Score =  111 bits (278), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 43/138 (31%), Positives = 65/138 (47%), Gaps = 6/138 (4%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-- 59
             L     +A SG++ QS R+   + NIANA +   +       R  I   E+       
Sbjct: 1   MSLFNIFDVAGSGMSAQSLRLNTTASNIANADSVSSSVDKTYRSRHPIFEAEMAKAQSQQ 60

Query: 60  ----GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
               GV VK I       ++E+ P HP+A+A G +  PNVNV+ E ADM   +R Y  N+
Sbjct: 61  QASQGVTVKGIVESDKPLLKEYSPDHPMADADGFIYKPNVNVMEEMADMISASRSYQMNV 120

Query: 116 QTIKQSHDMMTTTLDLLR 133
           Q  + +  M+  TL + +
Sbjct: 121 QVAEAAKSMLQQTLGMGK 138


>gi|300311350|ref|YP_003775442.1| flagellar basal-body rod protein [Herbaspirillum seropedicae SmR1]
 gi|300074135|gb|ADJ63534.1| Flagellar basal-body rod protein [Herbaspirillum seropedicae SmR1]
          Length = 134

 Score =  111 bits (278), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 41/135 (30%), Positives = 70/135 (51%), Gaps = 4/135 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH---GS 58
             L    ++A S ++ QS R+   + NIANA +   +P   PY+ K + F+ +       
Sbjct: 1   MSLSNIFNVAGSAMSAQSQRLNATASNIANADS-ATSPDGTPYKAKQVVFQAIPVGGVKD 59

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
            GV+V  +  DQ+     +DP HP+A+ +G V  PNVN + E  +M   +R Y  N++T+
Sbjct: 60  SGVKVAAVVEDQAPPKLVYDPKHPMADGNGYVAMPNVNPVEEMVNMISASRAYQTNVETM 119

Query: 119 KQSHDMMTTTLDLLR 133
             +  M+  TL + +
Sbjct: 120 NTAKAMLVKTLTIGQ 134


>gi|2275159|gb|AAB81411.1| FlgC [Sinorhizobium meliloti]
          Length = 138

 Score =  111 bits (278), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 74/135 (54%), Positives = 99/135 (73%), Gaps = 3/135 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
           D L  +  ++ SGL  +S R++I+SENIANAR+TGD PG+DP+RRKTISF   +  + G 
Sbjct: 1   DPLTLALKVSASGLQAESTRLRIVSENIANARSTGDAPGADPFRRKTISFAAEVDRASGA 60

Query: 62  ---RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
               V+++G D S F  EFDPG+P A+  G+VK PN+N+L+E ADMRE NR Y ANLQTI
Sbjct: 61  SLVEVERLGTDDSEFNIEFDPGNPAADEKGMVKLPNLNILIEMADMREANRAYEANLQTI 120

Query: 119 KQSHDMMTTTLDLLR 133
           KQS D+++ T+DLLR
Sbjct: 121 KQSRDLISQTIDLLR 135


>gi|332088752|gb|EGI93864.1| flagellar basal-body rod protein FlgC [Shigella boydii 5216-82]
          Length = 134

 Score =  111 bits (278), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 39/134 (29%), Positives = 65/134 (48%), Gaps = 2/134 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--G 59
             L+    IA S L  QS R+ + + N+ANA +     G     ++ +       G+  G
Sbjct: 1   MALLNIFDIAGSALTAQSQRLNVAASNLANADSVTGPDGQPYRAKQVVFQVNAAPGAATG 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GV+V  +   Q+     ++PG+ +A+A G VK PNV+V+ E  +    +R Y AN++ + 
Sbjct: 61  GVKVADVIESQAPDKLVYEPGNQLADAKGYVKMPNVDVVGEMVNTMSASRSYQANVEVLN 120

Query: 120 QSHDMMTTTLDLLR 133
               MM   L L +
Sbjct: 121 TVKSMMLKPLTLGQ 134


>gi|302342345|ref|YP_003806874.1| flagellar basal-body rod protein FlgC [Desulfarculus baarsii DSM
           2075]
 gi|301638958|gb|ADK84280.1| flagellar basal-body rod protein FlgC [Desulfarculus baarsii DSM
           2075]
          Length = 147

 Score =  111 bits (278), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 50/147 (34%), Positives = 69/147 (46%), Gaps = 15/147 (10%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKT------------- 48
              + S  I+ SGL+ Q  R+ IIS+N+ANA TT    G    RR T             
Sbjct: 1   MDFVTSMEISASGLSAQRTRLNIISQNLANAETTRTAEGGPYRRRVTVMSAQPFVSHLEQ 60

Query: 49  --ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
              S  +      GV V +I  D S F +  DP HP A+A G V YPNV+V+ E  ++  
Sbjct: 61  AIDSPPQQQDPRKGVLVNEIAQDNSPFKKVHDPSHPDADADGYVLYPNVDVVTEMVNLIS 120

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
             R Y AN+  +  S +M    L++ R
Sbjct: 121 ATRSYEANVSAVGASKNMALKALEIAR 147


>gi|124268256|ref|YP_001022260.1| flagellar basal body rod protein [Methylibium petroleiphilum PM1]
 gi|124261031|gb|ABM96025.1| flagellar basal body rod protein [Methylibium petroleiphilum PM1]
          Length = 138

 Score =  111 bits (278), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 35/138 (25%), Positives = 66/138 (47%), Gaps = 6/138 (4%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-- 59
             ++   +++ S ++ QS R+ +++ N+ANA T     G     R+ +         G  
Sbjct: 1   MSMLNIFNVSGSAVSAQSQRLNVVASNLANADTVAGPDGKAYKARQVVFQTLPFQQPGEA 60

Query: 60  ----GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
               GV+V ++  D +   +  DP HP A+A G V Y NVN + E  +M   +R Y  N+
Sbjct: 61  GTAAGVQVSQVTEDNAPGRKVLDPKHPQADADGYVTYSNVNAVEEMVNMISASRSYQNNI 120

Query: 116 QTIKQSHDMMTTTLDLLR 133
           + +  +  ++  TL + +
Sbjct: 121 EVMNTAKTLLLKTLQMGQ 138


>gi|255321464|ref|ZP_05362622.1| flagellar basal-body rod protein FlgC [Campylobacter showae RM3277]
 gi|255301320|gb|EET80579.1| flagellar basal-body rod protein FlgC [Campylobacter showae RM3277]
          Length = 165

 Score =  111 bits (277), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 47/164 (28%), Positives = 69/164 (42%), Gaps = 31/164 (18%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRK------------- 47
           M   ++   I+  GL+ Q  RM +IS NIANA T     G    RR+             
Sbjct: 1   MSNYLSDFDISGYGLSAQRFRMNVISSNIANANTVRTAEGGPYRRREVIFKAVDFDSVLN 60

Query: 48  ------------------TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGI 89
                                 ++       V V KI  D   F  ++DP HP A+A G 
Sbjct: 61  DEVAKKHNLLEYENPLDDKFYTKDAKPAIMSVVVDKIVRDDKDFKLKYDPSHPDADARGY 120

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           V YPN+N ++E AD+ E  R Y AN+   + +  +  + L+LL+
Sbjct: 121 VAYPNINPVIEMADLIEATRAYQANVSAFQSAKTIAQSALELLQ 164


>gi|118589983|ref|ZP_01547387.1| flagellar basal-body rod protein C [Stappia aggregata IAM 12614]
 gi|118437480|gb|EAV44117.1| flagellar basal-body rod protein C [Stappia aggregata IAM 12614]
          Length = 138

 Score =  111 bits (277), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 69/136 (50%), Positives = 94/136 (69%), Gaps = 3/136 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
           D L A+  I+ +GL  QS R++++SEN+ANAR+TG+  G DPYRRKTI+FE     +   
Sbjct: 3   DPLSATLQISGAGLRAQSERLRVVSENLANARSTGEAAGDDPYRRKTITFESEFSRAVQA 62

Query: 62  R---VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
               VK IG D++ F  E+DPGHP A+ +G VK PNVN L+E ADMRETNR Y ANL+ +
Sbjct: 63  NLVSVKGIGEDKAEFAVEYDPGHPAADENGYVKMPNVNTLLELADMRETNRSYEANLKVM 122

Query: 119 KQSHDMMTTTLDLLRD 134
            Q+ +M+   +DLLR+
Sbjct: 123 TQAREMVMRNIDLLRN 138


>gi|27381986|ref|NP_773515.1| flagellar basal body rod protein FlgC [Bradyrhizobium japonicum
           USDA 110]
 gi|27355156|dbj|BAC52140.1| flagellar basal-body rod protein [Bradyrhizobium japonicum USDA
           110]
          Length = 138

 Score =  111 bits (277), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 74/136 (54%), Positives = 98/136 (72%), Gaps = 3/136 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
           D L AS  +A+SGL  QS RM+I+SEN+ANA +TG T G+DPY+RKTI+F+  M  + G 
Sbjct: 3   DSLSASLTVASSGLEAQSTRMRIVSENLANATSTGRTAGADPYQRKTITFDAAMDRASGA 62

Query: 62  R---VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
           +   VK++GVD + +  E+DPGHP A+ SG VK PNVN+++E ADMRE NR Y ANLQ +
Sbjct: 63  QLAKVKEVGVDTTPYRVEYDPGHPAADKSGYVKLPNVNMMIEMADMREVNRSYEANLQVV 122

Query: 119 KQSHDMMTTTLDLLRD 134
           KQ   M+  T+DLLR 
Sbjct: 123 KQVRSMLGMTIDLLRS 138


>gi|120613057|ref|YP_972735.1| flagellar basal-body rod protein FlgC [Acidovorax citrulli AAC00-1]
 gi|120591521|gb|ABM34961.1| flagellar basal-body rod protein FlgC [Acidovorax citrulli AAC00-1]
          Length = 134

 Score =  111 bits (277), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 35/134 (26%), Positives = 63/134 (47%), Gaps = 2/134 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-- 59
             + +   ++ S ++ Q+ R+ +++ N+AN        G     R+ +     M G G  
Sbjct: 1   MSMFSIFGVSGSAISAQAQRLNVVASNLANVDAVAGPDGQAYKARQVVFQTAPMGGEGAA 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GVRV  I   Q+      DP HP A+A G V + NVN + E  +M   +R Y  N++ + 
Sbjct: 61  GVRVSAISESQAPGKRVLDPTHPQADAEGYVTHSNVNPVEEMVNMISASRSYQNNVEVLN 120

Query: 120 QSHDMMTTTLDLLR 133
            +  ++  TL + +
Sbjct: 121 TTKSLLLKTLQMGQ 134


>gi|78067839|ref|YP_370608.1| flagellar basal body rod protein FlgC [Burkholderia sp. 383]
 gi|77968584|gb|ABB09964.1| Flagellar basal-body rod protein FlgC [Burkholderia sp. 383]
          Length = 141

 Score =  111 bits (277), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 41/140 (29%), Positives = 71/140 (50%), Gaps = 8/140 (5%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM----- 55
           M  L+    +A S L+ QS R+ + + N+ANA +     G     ++ +   + +     
Sbjct: 1   MPSLMNIFGVAGSALSAQSQRLNVTASNLANADSATGPDGKPYKAKQVVFATDPIGGART 60

Query: 56  ---HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
               G GGVRV K+  D S     +DP +P A+++G V+ PNV+ + E  +M   +R Y 
Sbjct: 61  ASGQGVGGVRVTKVMDDPSPMKSTYDPSNPAADSNGYVQMPNVDPVQEMVNMISASRSYQ 120

Query: 113 ANLQTIKQSHDMMTTTLDLL 132
           AN++T+  +  +M  TL + 
Sbjct: 121 ANVETLNTAKTLMLKTLTIG 140


>gi|301631992|ref|XP_002945075.1| PREDICTED: flagellar basal-body rod protein flgC-like [Xenopus
           (Silurana) tropicalis]
          Length = 134

 Score =  111 bits (277), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 35/134 (26%), Positives = 64/134 (47%), Gaps = 2/134 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM--HGSG 59
             + +  +++ S ++ QS R+ +++ N+AN        G     R+ +     M    + 
Sbjct: 1   MSIFSIFNVSGSAISAQSQRLNVVASNLANVDAVAGPDGQAYKARQVVFQTTPMGSDSAA 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GVRV+ I   Q      FDPGHP A+  G V + NVN + E  +M   +R Y  N++ + 
Sbjct: 61  GVRVRSIEESQVPGRRVFDPGHPSADGEGYVNHSNVNAVEEMVNMISASRSYQNNVEVMN 120

Query: 120 QSHDMMTTTLDLLR 133
            +  ++  TL + +
Sbjct: 121 TAKTLLLKTLQMGQ 134


>gi|84502401|ref|ZP_01000537.1| flagellar basal body rod protein [Oceanicola batsensis HTCC2597]
 gi|84389213|gb|EAQ02010.1| flagellar basal body rod protein [Oceanicola batsensis HTCC2597]
          Length = 136

 Score =  111 bits (277), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 57/136 (41%), Positives = 84/136 (61%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD L +   I+ SG+  Q  R++++SEN+ANA +T  +PG DPYRRKTI+FEE++    G
Sbjct: 1   MDPLKSILTISASGMLAQGERLKVVSENVANASSTAMSPGEDPYRRKTITFEELLDSESG 60

Query: 61  V---RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           V    V  I  D S F   F+P HP A+  G +K  NV+ ++E A+MRE +R Y AN+  
Sbjct: 61  VSTVGVSSIDRDDSDFSLRFEPSHPAADEQGFIKVSNVSPIMEMANMREASRSYEANMNL 120

Query: 118 IKQSHDMMTTTLDLLR 133
            + +  M +  +DLL+
Sbjct: 121 FEAARRMRSQVIDLLK 136


>gi|292489135|ref|YP_003532022.1| flagellar basal-body rod protein FlgC [Erwinia amylovora CFBP1430]
 gi|292900254|ref|YP_003539623.1| flagellar basal-body rod protein [Erwinia amylovora ATCC 49946]
 gi|291200102|emb|CBJ47228.1| flagellar basal-body rod protein [Erwinia amylovora ATCC 49946]
 gi|291554569|emb|CBA22184.1| Flagellar basal-body rod protein flgC [Erwinia amylovora CFBP1430]
 gi|312173293|emb|CBX81548.1| Flagellar basal-body rod protein flgC [Erwinia amylovora ATCC
           BAA-2158]
          Length = 134

 Score =  111 bits (277), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 38/134 (28%), Positives = 67/134 (50%), Gaps = 2/134 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM--HGSG 59
             L +   I+ S +A QS R+ + + N+ANA +     G     R+     +    +  G
Sbjct: 1   MSLFSVFDISGSAMAAQSKRLNVSASNMANADSAVGPDGQPYRARQVTFEVDAAAGNEIG 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GV+V ++    +     ++PG+P+A+  G V+ PNVNV+ E  +    +R Y AN++ + 
Sbjct: 61  GVKVGEVVESSAPDRLVYEPGNPLADQQGYVRMPNVNVVDEMVNTLSASRSYQANVEVMN 120

Query: 120 QSHDMMTTTLDLLR 133
            +  MM  TL L +
Sbjct: 121 SAKAMMLKTLSLGQ 134


>gi|117621411|ref|YP_857345.1| flagellar basal body rod protein FlgC [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|117562818|gb|ABK39766.1| flagellar basal-body rod protein FlgC [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
          Length = 139

 Score =  111 bits (277), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 41/139 (29%), Positives = 70/139 (50%), Gaps = 6/139 (4%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG---- 57
             L     IA S ++ QS R+  ++ N+ANA +   +     + R+ I   ++       
Sbjct: 1   MSLFKVFDIAGSAMSAQSVRLNTVASNMANADSVSSSVEKTYHARRPIFAAQLDQAMSDK 60

Query: 58  --SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
             S GV VK I   ++  ++E++P HP+A+  G +  PNVN++ E ADM   +R Y  N+
Sbjct: 61  QASAGVEVKGIVESEAPLLKEYNPNHPMADKDGFIFKPNVNMVEEMADMINASRSYQTNV 120

Query: 116 QTIKQSHDMMTTTLDLLRD 134
           Q    +  M+  TL+L + 
Sbjct: 121 QVADSAKKMLQQTLNLGKS 139


>gi|254473329|ref|ZP_05086726.1| flagellar basal-body rod protein FlgC [Pseudovibrio sp. JE062]
 gi|211957445|gb|EEA92648.1| flagellar basal-body rod protein FlgC [Pseudovibrio sp. JE062]
          Length = 139

 Score =  111 bits (277), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 73/137 (53%), Positives = 100/137 (72%), Gaps = 3/137 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           +D L+AS  I++SGL VQS RM+I+SEN+AN ++TGDTPG++PY+RKTI+F+  +  + G
Sbjct: 2   IDPLVASLKISSSGLRVQSQRMRIVSENLANVQSTGDTPGANPYQRKTITFKSEVDRALG 61

Query: 61  VR---VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
                VK IG D+  +  EFDP HP A+ +G VKYPNVN L+E ADMRE +R Y A LQ 
Sbjct: 62  ANLVAVKNIGSDKGDYRVEFDPSHPAADENGNVKYPNVNTLIELADMREASRSYEAGLQM 121

Query: 118 IKQSHDMMTTTLDLLRD 134
           + +S +M+T T+DLLR 
Sbjct: 122 MVKSREMITRTIDLLRS 138


>gi|326319095|ref|YP_004236767.1| flagellar basal-body rod protein FlgC [Acidovorax avenae subsp.
           avenae ATCC 19860]
 gi|323375931|gb|ADX48200.1| flagellar basal-body rod protein FlgC [Acidovorax avenae subsp.
           avenae ATCC 19860]
          Length = 134

 Score =  111 bits (277), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 34/134 (25%), Positives = 62/134 (46%), Gaps = 2/134 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-- 59
             + +   ++ S ++ Q+ R+ +++ N+AN        G     R+ +     M   G  
Sbjct: 1   MSMFSIFGVSGSAISAQAQRLNVVASNLANVDAVAGPDGQAYKARQVVFQTAPMGDEGAA 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GVRV  I   Q+      DP HP A+A G V + NVN + E  +M   +R Y  N++ + 
Sbjct: 61  GVRVSAISESQAPGKRVLDPTHPQADAEGYVTHSNVNPVEEMVNMISASRSYQNNVEVLN 120

Query: 120 QSHDMMTTTLDLLR 133
            +  ++  TL + +
Sbjct: 121 TTKSLLLKTLQMGQ 134


>gi|146307871|ref|YP_001188336.1| flagellar basal body rod protein FlgC [Pseudomonas mendocina ymp]
 gi|145576072|gb|ABP85604.1| flagellar basal-body rod protein FlgC [Pseudomonas mendocina ymp]
          Length = 147

 Score =  111 bits (276), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 46/147 (31%), Positives = 69/147 (46%), Gaps = 15/147 (10%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             L +  +IA +G++ QS R+  IS NIANA T   +       R  +         GG 
Sbjct: 1   MSLASVFNIAGTGMSAQSTRLNTISSNIANAETVSSSIDQTYRARHPVFATVFQQAQGGD 60

Query: 62  R---------------VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
           R               V  +  DQS+ +  ++P HP+ANA G V YPNVNV+ E ADM  
Sbjct: 61  RGSLFAEQDEAGRGVQVLGVVEDQSSLMPRYEPDHPMANADGYVYYPNVNVVEEMADMIS 120

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
            +R +  N++ +  +  M+   L L +
Sbjct: 121 ASRAFQTNVEMMNTAKQMLQRVLTLGQ 147


>gi|222053600|ref|YP_002535962.1| flagellar basal-body rod protein FlgC [Geobacter sp. FRC-32]
 gi|221562889|gb|ACM18861.1| flagellar basal-body rod protein FlgC [Geobacter sp. FRC-32]
          Length = 146

 Score =  111 bits (276), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 47/146 (32%), Positives = 65/146 (44%), Gaps = 14/146 (9%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM------ 55
                S  I+ S L  +  RM +IS N+ANA +T    G    R+  +   E +      
Sbjct: 1   MDFFTSMDISASALTAERTRMNLISSNLANAGSTRTAEGGPYKRKDAVFAAEPVVEPFSS 60

Query: 56  --------HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                        V V +I  DQ+    ++DP HP A+A G V  PNVNV+ E ADM   
Sbjct: 61  ILKKAGGSMEPKQVGVVQITEDQTPPRLQYDPTHPDADAKGYVALPNVNVVEEMADMIAA 120

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y AN+   + +  M   TL+L R
Sbjct: 121 TRTYEANVTAAQAAKSMALKTLELGR 146


>gi|77165840|ref|YP_344365.1| flagellar basal-body rod protein FlgC [Nitrosococcus oceani ATCC
           19707]
 gi|254433209|ref|ZP_05046717.1| flagellar basal-body rod protein FlgC [Nitrosococcus oceani AFC27]
 gi|76884154|gb|ABA58835.1| Flagellar basal-body rod protein FlgC [Nitrosococcus oceani ATCC
           19707]
 gi|207089542|gb|EDZ66813.1| flagellar basal-body rod protein FlgC [Nitrosococcus oceani AFC27]
          Length = 137

 Score =  111 bits (276), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 35/136 (25%), Positives = 63/136 (46%), Gaps = 5/136 (3%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS-----FEEVMH 56
             L     IA + ++ Q+ R+   + N+ANA +   +       R+ +            
Sbjct: 1   MSLFKVFDIAGTAMSAQTLRLNTTASNLANADSVSSSIDQTYRARQPVFATLLDKFNPEA 60

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
            +GGV+V  +    +   +E+ P HP+AN +G + +PNVN + E A+M   +R Y  N++
Sbjct: 61  PAGGVQVLGVVESGAPLQQEYAPDHPMANEAGYIFHPNVNSIEEMANMISASRNYENNVE 120

Query: 117 TIKQSHDMMTTTLDLL 132
               S  ++  TL L 
Sbjct: 121 MANTSKQLLLRTLQLG 136


>gi|53717912|ref|YP_106898.1| flagellar basal body rod protein FlgC [Burkholderia pseudomallei
           K96243]
 gi|53724563|ref|YP_104796.1| flagellar basal body rod protein FlgC [Burkholderia mallei ATCC
           23344]
 gi|76809289|ref|YP_331878.1| flagellar basal body rod protein FlgC [Burkholderia pseudomallei
           1710b]
 gi|121599639|ref|YP_994289.1| flagellar basal body rod protein FlgC [Burkholderia mallei SAVP1]
 gi|124385719|ref|YP_001028062.1| flagellar basal body rod protein FlgC [Burkholderia mallei NCTC
           10229]
 gi|126439110|ref|YP_001057320.1| flagellar basal body rod protein FlgC [Burkholderia pseudomallei
           668]
 gi|126450357|ref|YP_001082869.1| flagellar basal body rod protein FlgC [Burkholderia mallei NCTC
           10247]
 gi|126454889|ref|YP_001064562.1| flagellar basal body rod protein FlgC [Burkholderia pseudomallei
           1106a]
 gi|134283634|ref|ZP_01770333.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           305]
 gi|167001534|ref|ZP_02267329.1| flagellar basal-body rod protein FlgC [Burkholderia mallei PRL-20]
 gi|167717658|ref|ZP_02400894.1| flagellar basal body rod protein FlgC [Burkholderia pseudomallei
           DM98]
 gi|167736701|ref|ZP_02409475.1| flagellar basal body rod protein FlgC [Burkholderia pseudomallei
           14]
 gi|167813799|ref|ZP_02445479.1| flagellar basal body rod protein FlgC [Burkholderia pseudomallei
           91]
 gi|167822316|ref|ZP_02453787.1| flagellar basal body rod protein FlgC [Burkholderia pseudomallei 9]
 gi|167843906|ref|ZP_02469414.1| flagellar basal body rod protein FlgC [Burkholderia pseudomallei
           B7210]
 gi|167892408|ref|ZP_02479810.1| flagellar basal body rod protein FlgC [Burkholderia pseudomallei
           7894]
 gi|167900906|ref|ZP_02488111.1| flagellar basal body rod protein FlgC [Burkholderia pseudomallei
           NCTC 13177]
 gi|167909125|ref|ZP_02496216.1| flagellar basal body rod protein FlgC [Burkholderia pseudomallei
           112]
 gi|167917162|ref|ZP_02504253.1| flagellar basal body rod protein FlgC [Burkholderia pseudomallei
           BCC215]
 gi|217424916|ref|ZP_03456412.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           576]
 gi|226199800|ref|ZP_03795351.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           Pakistan 9]
 gi|237810459|ref|YP_002894910.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           MSHR346]
 gi|238562527|ref|ZP_00440313.2| flagellar basal-body rod protein FlgC [Burkholderia mallei GB8
           horse 4]
 gi|242316173|ref|ZP_04815189.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           1106b]
 gi|254174790|ref|ZP_04881451.1| flagellar basal-body rod protein FlgC [Burkholderia mallei ATCC
           10399]
 gi|254182142|ref|ZP_04888739.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           1655]
 gi|254188072|ref|ZP_04894584.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           Pasteur 52237]
 gi|254197006|ref|ZP_04903430.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           S13]
 gi|254201894|ref|ZP_04908258.1| flagellar basal-body rod protein FlgC [Burkholderia mallei FMH]
 gi|254207228|ref|ZP_04913579.1| flagellar basal-body rod protein FlgC [Burkholderia mallei JHU]
 gi|254258642|ref|ZP_04949696.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           1710a]
 gi|254295812|ref|ZP_04963269.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           406e]
 gi|254359730|ref|ZP_04976001.1| flagellar basal-body rod protein FlgC [Burkholderia mallei
           2002721280]
 gi|42766726|gb|AAS45446.1| putative flagellar biosynthesis protein [Burkholderia pseudomallei]
 gi|52208326|emb|CAH34259.1| flagellar basal-body rod protein [Burkholderia pseudomallei K96243]
 gi|52427986|gb|AAU48579.1| flagellar basal-body rod protein FlgC [Burkholderia mallei ATCC
           23344]
 gi|76578742|gb|ABA48217.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           1710b]
 gi|121228449|gb|ABM50967.1| flagellar basal-body rod protein FlgC [Burkholderia mallei SAVP1]
 gi|124293739|gb|ABN03008.1| flagellar basal-body rod protein FlgC [Burkholderia mallei NCTC
           10229]
 gi|126218603|gb|ABN82109.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           668]
 gi|126228531|gb|ABN92071.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           1106a]
 gi|126243227|gb|ABO06320.1| flagellar basal-body rod protein FlgC [Burkholderia mallei NCTC
           10247]
 gi|134245043|gb|EBA45138.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           305]
 gi|147747788|gb|EDK54864.1| flagellar basal-body rod protein FlgC [Burkholderia mallei FMH]
 gi|147752770|gb|EDK59836.1| flagellar basal-body rod protein FlgC [Burkholderia mallei JHU]
 gi|148028944|gb|EDK86876.1| flagellar basal-body rod protein FlgC [Burkholderia mallei
           2002721280]
 gi|157805705|gb|EDO82875.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           406e]
 gi|157935752|gb|EDO91422.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           Pasteur 52237]
 gi|160695835|gb|EDP85805.1| flagellar basal-body rod protein FlgC [Burkholderia mallei ATCC
           10399]
 gi|169653749|gb|EDS86442.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           S13]
 gi|184212680|gb|EDU09723.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           1655]
 gi|217391936|gb|EEC31962.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           576]
 gi|225928151|gb|EEH24187.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           Pakistan 9]
 gi|237504017|gb|ACQ96335.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           MSHR346]
 gi|238522487|gb|EEP85931.1| flagellar basal-body rod protein FlgC [Burkholderia mallei GB8
           horse 4]
 gi|242139412|gb|EES25814.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           1106b]
 gi|243062736|gb|EES44922.1| flagellar basal-body rod protein FlgC [Burkholderia mallei PRL-20]
 gi|254217331|gb|EET06715.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           1710a]
          Length = 141

 Score =  111 bits (276), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 40/140 (28%), Positives = 68/140 (48%), Gaps = 8/140 (5%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM----- 55
           M  L+    +A S ++ QS R+ + + N+ANA +     G     ++ +     M     
Sbjct: 1   MPSLMNIFDVAGSAMSAQSQRLNVTASNLANADSVTGPDGKPYKAKQVVFATAPMGRART 60

Query: 56  ---HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
               G GGV+V K+  D S     +DP +P A+ +G V  PNV+ + E  +M   +R Y 
Sbjct: 61  ASGQGVGGVQVSKVIDDPSPMKTAYDPSNPAADQNGYVTMPNVDPVQEMVNMISASRSYQ 120

Query: 113 ANLQTIKQSHDMMTTTLDLL 132
           AN++T+  +  +M  TL + 
Sbjct: 121 ANVETLNTAKQLMLKTLTIG 140


>gi|323165582|gb|EFZ51369.1| flagellar basal-body rod protein FlgC [Shigella sonnei 53G]
          Length = 134

 Score =  111 bits (276), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 41/134 (30%), Positives = 67/134 (50%), Gaps = 2/134 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--G 59
             L+    IA S L  QS R+ + + N+ANA +     G     ++ +       G+  G
Sbjct: 1   MALLNIFDIAGSALTAQSQRLNVAASNLANADSVTGPDGQPYRAKQVVFQVNAAPGAATG 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GV+V  +   Q+     ++PG+P+A+A G VK PNV+V+ E  +    +R Y AN++ + 
Sbjct: 61  GVKVADVIESQAPDKLVYEPGNPLADAKGYVKMPNVDVVGEMVNTMSASRSYQANVEVLN 120

Query: 120 QSHDMMTTTLDLLR 133
               MM  TL L +
Sbjct: 121 MVKSMMLKTLTLGQ 134


>gi|320354315|ref|YP_004195654.1| flagellar basal-body rod protein FlgC [Desulfobulbus propionicus
           DSM 2032]
 gi|320122817|gb|ADW18363.1| flagellar basal-body rod protein FlgC [Desulfobulbus propionicus
           DSM 2032]
          Length = 145

 Score =  111 bits (276), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 50/144 (34%), Positives = 66/144 (45%), Gaps = 13/144 (9%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH----- 56
             +  +  IA SGL  Q+ R+  IS N+AN+ TT    G    ++  +   E +      
Sbjct: 1   MDIFTTFDIAASGLKAQTMRLNTISANLANSETTSTPEGGPYKKKSVVFQTENLPFKQHL 60

Query: 57  --------GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                    + GV+V KI  D S     +DP HP A   G V+ PNVNVL E  DM  T 
Sbjct: 61  NNSLLAQGQAQGVKVAKIIEDTSEPQRVYDPTHPDAKEDGYVEMPNVNVLKEMVDMMSTT 120

Query: 109 RLYMANLQTIKQSHDMMTTTLDLL 132
           R Y AN  TIK +  M    LD+ 
Sbjct: 121 RSYEANTTTIKSAKRMAMRALDIG 144


>gi|225849147|ref|YP_002729311.1| flagellar basal-body rod protein FlgC [Sulfurihydrogenibium
           azorense Az-Fu1]
 gi|225643183|gb|ACN98233.1| flagellar basal-body rod protein FlgC [Sulfurihydrogenibium
           azorense Az-Fu1]
          Length = 137

 Score =  111 bits (276), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 45/136 (33%), Positives = 69/136 (50%), Gaps = 7/136 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV-- 61
           +     ++ SG+  +  R+ + + N+AN  +T    G  PYRRK   FE V+        
Sbjct: 2   IFKGLEVSVSGMQAERVRIDLSASNLANVNSTRAEDGQ-PYRRKVPVFEAVLDSQSKNTP 60

Query: 62  ----RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
               RVK+I  D S F  +FDP +P A+ +G V+ PNV+ + E  DM    R Y ANL  
Sbjct: 61  IYKVRVKEIQTDPSPFKLKFDPNNPDADQNGYVRLPNVDPIREMVDMMSAMRSYEANLTA 120

Query: 118 IKQSHDMMTTTLDLLR 133
                DM+  +L+++R
Sbjct: 121 FNTHKDMILKSLEIIR 136


>gi|34498342|ref|NP_902557.1| flagellar basal-body rod protein flgC [Chromobacterium violaceum
           ATCC 12472]
 gi|34104196|gb|AAQ60555.1| flagellar basal-body rod protein flgC [Chromobacterium violaceum
           ATCC 12472]
          Length = 136

 Score =  111 bits (276), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 41/136 (30%), Positives = 69/136 (50%), Gaps = 4/136 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF----EEVMHG 57
             L    +I+ S L+ QS R+ +++ N+ANA +   + G     R  +      +     
Sbjct: 1   MSLSNLFNISGSALSAQSMRLNVVASNLANAESATSSTGQPYKGRHVVFTAVPVDAAQPQ 60

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
             GVRV  +  DQS    +++PG+P+A+  G V  PNVNV+ E ADM   +R Y  N++ 
Sbjct: 61  VAGVRVTSVVEDQSPPRLKYEPGNPLADERGYVTMPNVNVVEEMADMIAASRAYQNNVEM 120

Query: 118 IKQSHDMMTTTLDLLR 133
           +  +  ++  TL L +
Sbjct: 121 MNTAKSLLQKTLQLGQ 136


>gi|224825162|ref|ZP_03698268.1| flagellar basal-body rod protein FlgC [Lutiella nitroferrum 2002]
 gi|224602833|gb|EEG09010.1| flagellar basal-body rod protein FlgC [Lutiella nitroferrum 2002]
          Length = 136

 Score =  111 bits (276), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 41/136 (30%), Positives = 64/136 (47%), Gaps = 4/136 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF----EEVMHG 57
             L     IA S L  QS R+ +++ NIANA +   + G     R  +            
Sbjct: 1   MSLSNVFTIAGSALTAQSMRLNVVASNIANAESATSSTGQPYQGRHVVFTAIPVSATQPQ 60

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
             GVRV  +  D +    ++DPG+P+A+  G V  PNVN + E ADM    R Y  N++ 
Sbjct: 61  VAGVRVTSVVEDTTPPRLKYDPGNPLADQRGYVNLPNVNPVEEMADMISAARSYQTNVEL 120

Query: 118 IKQSHDMMTTTLDLLR 133
           +  + +++  TL L +
Sbjct: 121 MNTAKNLLQKTLQLGQ 136


>gi|126175148|ref|YP_001051297.1| flagellar basal body rod protein FlgC [Shewanella baltica OS155]
 gi|125998353|gb|ABN62428.1| flagellar basal-body rod protein FlgC [Shewanella baltica OS155]
          Length = 138

 Score =  111 bits (276), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 43/138 (31%), Positives = 66/138 (47%), Gaps = 6/138 (4%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-- 59
             L +   +A SG++ QS R+   + NIANA +   +       R  I   E+       
Sbjct: 1   MSLFSIFDVAGSGMSAQSVRLNTTASNIANADSVSSSVDKTYRARHPIFEAEMAKAQSQQ 60

Query: 60  ----GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
               GV VK I       ++E+ P HP+A+A G +  PNVNV+ E ADM   +R Y  N+
Sbjct: 61  QASQGVAVKGIVESDKPLLKEYSPDHPMADADGFIYKPNVNVMEEMADMISASRSYQMNV 120

Query: 116 QTIKQSHDMMTTTLDLLR 133
           Q  + +  M+  TL + +
Sbjct: 121 QVAEAAKSMLQQTLGMGK 138


>gi|114562340|ref|YP_749853.1| flagellar basal body rod protein FlgC [Shewanella frigidimarina
           NCIMB 400]
 gi|114333633|gb|ABI71015.1| flagellar basal-body rod protein FlgC [Shewanella frigidimarina
           NCIMB 400]
          Length = 138

 Score =  111 bits (276), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 41/138 (29%), Positives = 67/138 (48%), Gaps = 6/138 (4%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM------ 55
             L    +++ SG++ QS R+   + NIANA +   +       R  +   E++      
Sbjct: 1   MSLFNIFNVSGSGMSAQSVRLNTTASNIANADSVSSSVDKTYRARHPVFEAEMLKANSQQ 60

Query: 56  HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
           + S GV VK I       ++E+ P HP+A+  G +  PNVNV+ E ADM   +R Y  N+
Sbjct: 61  NSSPGVTVKGIVESDKPLLKEYSPDHPMADGDGFIYKPNVNVMEEMADMISASRSYQMNV 120

Query: 116 QTIKQSHDMMTTTLDLLR 133
           Q    +  M+  TL + +
Sbjct: 121 QVADATKSMLQQTLRMGK 138


>gi|317047689|ref|YP_004115337.1| flagellar basal-body rod protein FlgC [Pantoea sp. At-9b]
 gi|316949306|gb|ADU68781.1| flagellar basal-body rod protein FlgC [Pantoea sp. At-9b]
          Length = 134

 Score =  111 bits (276), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 40/134 (29%), Positives = 67/134 (50%), Gaps = 2/134 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH--GSG 59
             L+    IA S +  QS R+ + + N+ANA +     G     ++ +   +      +G
Sbjct: 1   MALLNIFDIAGSAMTAQSQRLNVSASNLANADSVTGPDGQPYVAKQVVFQTDAAPGMATG 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GV+V  +  D S     +DPG+P+A+  G VK PNV+V+ ET +    +R Y AN++ + 
Sbjct: 61  GVKVAGVVDDPSPAKLVYDPGNPMADQKGYVKMPNVDVVAETVNTMSASRSYQANVEVLN 120

Query: 120 QSHDMMTTTLDLLR 133
               MM  TL + +
Sbjct: 121 TVKSMMMKTLTMGQ 134


>gi|330818587|ref|YP_004362292.1| flagellar basal-body rod protein FlgC [Burkholderia gladioli BSR3]
 gi|327370980|gb|AEA62336.1| flagellar basal-body rod protein FlgC [Burkholderia gladioli BSR3]
          Length = 141

 Score =  111 bits (276), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 39/140 (27%), Positives = 71/140 (50%), Gaps = 8/140 (5%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM----- 55
           M  L+    +A S ++ +S R+ + + N+ANA +     G     ++ +   + +     
Sbjct: 1   MPSLMNIFDVAGSAMSAESQRLNVTASNLANADSVTGPDGKPYRAKQVVFETQPVGNART 60

Query: 56  ---HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
               G GGV+VK++  D S     +DP +P A+A+G V  PNV+ + E  +M   +R Y 
Sbjct: 61  RSGQGVGGVQVKQVIDDPSPMKTNYDPSNPAADANGYVTMPNVDPVQEMVNMISASRSYQ 120

Query: 113 ANLQTIKQSHDMMTTTLDLL 132
           AN++T+  +  +M  TL + 
Sbjct: 121 ANVETLNTAKQLMLKTLTIG 140


>gi|153001474|ref|YP_001367155.1| flagellar basal body rod protein FlgC [Shewanella baltica OS185]
 gi|160876205|ref|YP_001555521.1| flagellar basal body rod protein FlgC [Shewanella baltica OS195]
 gi|151366092|gb|ABS09092.1| flagellar basal-body rod protein FlgC [Shewanella baltica OS185]
 gi|160861727|gb|ABX50261.1| flagellar basal-body rod protein FlgC [Shewanella baltica OS195]
 gi|315268395|gb|ADT95248.1| flagellar basal-body rod protein FlgC [Shewanella baltica OS678]
          Length = 138

 Score =  111 bits (276), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 43/138 (31%), Positives = 66/138 (47%), Gaps = 6/138 (4%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-- 59
             L +   +A SG++ QS R+   + NIANA +   +       R  I   E+       
Sbjct: 1   MSLFSIFDVAGSGMSAQSVRLNTTASNIANADSVSSSVDKTYRSRHPIFEAEMAKAQSQQ 60

Query: 60  ----GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
               GV VK I       ++E+ P HP+A+A G +  PNVNV+ E ADM   +R Y  N+
Sbjct: 61  QASQGVAVKGIVESDKPLLKEYSPDHPMADADGFIYKPNVNVMEEMADMISASRSYQMNV 120

Query: 116 QTIKQSHDMMTTTLDLLR 133
           Q  + +  M+  TL + +
Sbjct: 121 QVAEAAKSMLQQTLGMGK 138


>gi|217972596|ref|YP_002357347.1| flagellar basal body rod protein FlgC [Shewanella baltica OS223]
 gi|304409980|ref|ZP_07391599.1| flagellar basal-body rod protein FlgC [Shewanella baltica OS183]
 gi|307302307|ref|ZP_07582065.1| flagellar basal-body rod protein FlgC [Shewanella baltica BA175]
 gi|217497731|gb|ACK45924.1| flagellar basal-body rod protein FlgC [Shewanella baltica OS223]
 gi|304351389|gb|EFM15788.1| flagellar basal-body rod protein FlgC [Shewanella baltica OS183]
 gi|306914345|gb|EFN44766.1| flagellar basal-body rod protein FlgC [Shewanella baltica BA175]
          Length = 138

 Score =  111 bits (276), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 43/138 (31%), Positives = 66/138 (47%), Gaps = 6/138 (4%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-- 59
             L +   +A SG++ QS R+   + NIANA +   +       R  I   E+       
Sbjct: 1   MSLFSIFDVAGSGMSAQSVRLNTTASNIANADSVSSSVDKTYRSRHPIFEAEMAKAQSQQ 60

Query: 60  ----GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
               GV VK I       ++E+ P HP+A+A G +  PNVNV+ E ADM   +R Y  N+
Sbjct: 61  QASQGVAVKGIVESDRPLLKEYSPDHPMADADGFIYKPNVNVMEEMADMISASRSYQMNV 120

Query: 116 QTIKQSHDMMTTTLDLLR 133
           Q  + +  M+  TL + +
Sbjct: 121 QVAEAAKSMLQQTLGMGK 138


>gi|260222465|emb|CBA32056.1| Flagellar basal-body rod protein flgC [Curvibacter putative
           symbiont of Hydra magnipapillata]
          Length = 134

 Score =  111 bits (276), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 33/134 (24%), Positives = 62/134 (46%), Gaps = 2/134 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM--HGSG 59
             + +  +++ S ++ QS R+ +++ N+ANA       G     R+ +     M    S 
Sbjct: 1   MSMFSIFNVSGSAVSAQSQRLNVVASNLANADAVAGPDGQGYKSRQVVFETVPMGSEASS 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GV+V  I        +  +P HP A+A G V   NVN + E  +M   +R Y  N++ + 
Sbjct: 61  GVKVSSIKESNEPLRKVHNPLHPSADADGYVTQSNVNPVEEMVNMISASRSYQNNVEVMN 120

Query: 120 QSHDMMTTTLDLLR 133
            +  ++  TL + +
Sbjct: 121 TAKSLLLKTLQMGQ 134


>gi|330502732|ref|YP_004379601.1| flagellar basal body rod protein FlgC [Pseudomonas mendocina NK-01]
 gi|328917018|gb|AEB57849.1| flagellar basal body rod protein FlgC [Pseudomonas mendocina NK-01]
          Length = 147

 Score =  111 bits (276), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 46/147 (31%), Positives = 69/147 (46%), Gaps = 15/147 (10%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             L +  +IA +G++ QS R+  IS NIANA T   +       R  +         GG 
Sbjct: 1   MSLASVFNIAGTGMSAQSTRLNTISSNIANAETVSSSLDQTYRARHPVFATVFQQAQGGD 60

Query: 62  R---------------VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
           R               V  +  DQS+ +  ++P HP+ANA G V YPNVNV+ E ADM  
Sbjct: 61  RGSLFAEQDEAGRGVQVLGVIEDQSSLMPRYEPDHPMANADGYVYYPNVNVVEEMADMIS 120

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
            +R +  N++ +  +  M+   L L +
Sbjct: 121 ASRAFQTNVEMMNTAKQMLQRVLTLGQ 147


>gi|302037602|ref|YP_003797924.1| flagellar basal-body rod protein FlgC [Candidatus Nitrospira
           defluvii]
 gi|300605666|emb|CBK41999.1| Flagellar basal-body rod protein FlgC [Candidatus Nitrospira
           defluvii]
          Length = 149

 Score =  111 bits (276), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 42/149 (28%), Positives = 66/149 (44%), Gaps = 17/149 (11%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR--------------- 46
             L  S  ++ S L     R+ +I+ N+ANA++T  + G    RR               
Sbjct: 1   MELTDSLAVSVSALDAHRHRLNVIASNLANAQSTKTSTGGPYRRRDVVFQAAPVSPTFQK 60

Query: 47  --KTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
             K ++         GV+V ++  D+      +DP HP A+  G V  PNVNV+ E  +M
Sbjct: 61  AFKQVTSGPGRQALDGVKVARVIEDKKPGQTVYDPRHPDADKKGFVTMPNVNVMEEMVNM 120

Query: 105 RETNRLYMANLQTIKQSHDMMTTTLDLLR 133
              +R Y AN+Q I  +  M    L++ R
Sbjct: 121 IGASRAYEANVQAINATRTMWNRALEIGR 149


>gi|167568105|ref|ZP_02361021.1| flagellar basal body rod protein FlgC [Burkholderia oklahomensis
           EO147]
 gi|167574223|ref|ZP_02367097.1| flagellar basal body rod protein FlgC [Burkholderia oklahomensis
           C6786]
          Length = 141

 Score =  111 bits (276), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 40/140 (28%), Positives = 68/140 (48%), Gaps = 8/140 (5%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM----- 55
           M  L+    +A S ++ QS R+ + + N+ANA +     G     ++ +     M     
Sbjct: 1   MPSLMNIFDVAGSAMSAQSQRLNVTASNLANADSVTGPDGKPYKAKQVVFATAPMGRART 60

Query: 56  ---HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
               G GGV+V K+  D S     +DP +P A+ +G V  PNV+ + E  +M   +R Y 
Sbjct: 61  ASGQGVGGVQVTKVIDDPSPMKTAYDPSNPAADQNGYVTMPNVDPVQEMVNMISASRSYQ 120

Query: 113 ANLQTIKQSHDMMTTTLDLL 132
           AN++T+  +  +M  TL + 
Sbjct: 121 ANVETLNTAKQLMLKTLTIG 140


>gi|21672602|ref|NP_660669.1| flagellar basal-body rod protein FlgC [Buchnera aphidicola str. Sg
           (Schizaphis graminum)]
 gi|25008458|sp|Q8K9K8|FLGC_BUCAP RecName: Full=Flagellar basal-body rod protein flgC
 gi|21623233|gb|AAM67880.1| flagellar basal-body rod protein FlgC [Buchnera aphidicola str. Sg
           (Schizaphis graminum)]
          Length = 136

 Score =  111 bits (276), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 40/135 (29%), Positives = 69/135 (51%), Gaps = 4/135 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGS--DPYRRKTISFEEVMHGS- 58
             L+   +IA S ++ QS ++ +I+ N+ANA +     G       +K I   + +  S 
Sbjct: 1   MSLLNILNIAGSAMSAQSEKINVIASNLANAESIVCKDGKFYPYIAKKVIFKLDPLKNSL 60

Query: 59  -GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
            GGV+V  I  D +     +DP +P++N +G V   NVN + ET +    +R Y AN++ 
Sbjct: 61  IGGVKVFSIINDLNPMKLIYDPSNPLSNKNGYVLQTNVNPVSETINHISASRSYQANVEV 120

Query: 118 IKQSHDMMTTTLDLL 132
           +K +  M+  TL + 
Sbjct: 121 LKTAKSMIMKTLSIG 135


>gi|114320055|ref|YP_741738.1| flagellar basal-body rod protein FlgC [Alkalilimnicola ehrlichii
           MLHE-1]
 gi|114226449|gb|ABI56248.1| flagellar basal-body rod protein FlgC [Alkalilimnicola ehrlichii
           MLHE-1]
          Length = 151

 Score =  111 bits (276), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 33/150 (22%), Positives = 61/150 (40%), Gaps = 18/150 (12%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS----------- 50
             L     ++ SG+  Q  R+  ++ N+AN+ T   +P      R+ +            
Sbjct: 1   MSLFKVFDVSGSGMNAQQTRLNTVASNLANSETVAGSPEQAYRSRQPVFASVLQAAQQGQ 60

Query: 51  -------FEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETAD 103
                    +    + GV+V+ I    +     + P HP A+  G V   NVN + E  +
Sbjct: 61  AAGNPNHPGDARGTNVGVKVEDIVQSDAPVQPLYMPNHPQADEQGYVYRSNVNPVEEMTN 120

Query: 104 MRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           M   +R Y  N++ +  S +++  TL L +
Sbjct: 121 MISASRSYQNNVEVMNTSKELLLQTLRLGQ 150


>gi|260886629|ref|ZP_05897892.1| flagellar basal-body rod protein FlgC [Selenomonas sputigena ATCC
           35185]
 gi|330839539|ref|YP_004414119.1| flagellar basal-body rod protein FlgC [Selenomonas sputigena ATCC
           35185]
 gi|260863772|gb|EEX78272.1| flagellar basal-body rod protein FlgC [Selenomonas sputigena ATCC
           35185]
 gi|329747303|gb|AEC00660.1| flagellar basal-body rod protein FlgC [Selenomonas sputigena ATCC
           35185]
          Length = 147

 Score =  110 bits (275), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 47/147 (31%), Positives = 65/147 (44%), Gaps = 15/147 (10%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV------- 54
             +      + SGL  +  RM +IS NIANA TT    G   +RR  +            
Sbjct: 1   MSMFGGIDASASGLTAERLRMDVISNNIANANTTRSVEGGPYHRRYVVFQPRERGKEDFA 60

Query: 55  --------MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
                        GVR  KI  D+S     +DPGHP ANA G V+ PN+N++ E  DM  
Sbjct: 61  STLRQKLDNQAGNGVRAMKIEEDRSQGPLVYDPGHPDANADGYVERPNINIVQEMVDMIT 120

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
            +R Y AN+  I  +  M    L++ +
Sbjct: 121 ASRAYEANVTAINAAKGMAQNALNIGK 147


>gi|325295411|ref|YP_004281925.1| flagellar basal-body rod protein FlgC [Desulfurobacterium
           thermolithotrophum DSM 11699]
 gi|325065859|gb|ADY73866.1| flagellar basal-body rod protein FlgC [Desulfurobacterium
           thermolithotrophum DSM 11699]
          Length = 135

 Score =  110 bits (275), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 46/135 (34%), Positives = 71/135 (52%), Gaps = 7/135 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---- 59
           +     ++ +G+ VQ  R+ I S N+ANA +       +PYRRK   FE V+  +     
Sbjct: 2   IFKGLEVSLTGMEVQRVRIDIHSSNLANANSV--DENGNPYRRKIPIFESVLEKTAKGEI 59

Query: 60  -GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
             V+VKKI  D S +  ++DP +P+A+ +G VK PNV+ + E  DM    R Y ANL   
Sbjct: 60  YRVKVKKIVEDPSPYKLKYDPSNPLADKNGYVKLPNVDPIREMVDMISAMRTYEANLTAF 119

Query: 119 KQSHDMMTTTLDLLR 133
                M+   +D+L+
Sbjct: 120 NTHKGMLLNAIDILK 134


>gi|117923583|ref|YP_864200.1| flagellar basal-body rod protein FlgC [Magnetococcus sp. MC-1]
 gi|117607339|gb|ABK42794.1| flagellar basal-body rod protein FlgC [Magnetococcus sp. MC-1]
          Length = 141

 Score =  110 bits (275), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 51/142 (35%), Positives = 70/142 (49%), Gaps = 10/142 (7%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG--- 57
           MD+L  S  +  SGLA Q  RM IISEN+ANA+TT    G    RR  +           
Sbjct: 1   MDFLT-SFKVTASGLAAQRLRMNIISENVANAQTTRTPEGGPYKRRDPVFMSRPFQDYLT 59

Query: 58  ------SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
                 + GV V ++ VD      ++DP HP ANA G V  PN++V+ E  +M   +R Y
Sbjct: 60  REESAGATGVAVDRVNVDHRPPRLQYDPNHPDANADGYVAMPNIDVMTEMVNMMSASRSY 119

Query: 112 MANLQTIKQSHDMMTTTLDLLR 133
            AN+  +  S  M    L++ R
Sbjct: 120 EANVSVLNASKQMALKALEIGR 141


>gi|187478183|ref|YP_786207.1| flagellar basal body rod protein FlgC [Bordetella avium 197N]
 gi|115422769|emb|CAJ49297.1| flagellar basal-body rod protein [Bordetella avium 197N]
          Length = 139

 Score =  110 bits (275), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 6/139 (4%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM------ 55
             L++   I+ S LA QS R+ + + N+ANA +     G     R+ +            
Sbjct: 1   MSLLSIFEISGSALAAQSQRLNVAASNLANADSVAGPDGQPYRARQVVFQMNPALGQAAG 60

Query: 56  HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
              GGV+V  +  D S     FDP +P+A+A G V  PNV+ + ET +M   +R Y AN+
Sbjct: 61  QEIGGVKVAAVVEDASPLKMVFDPKNPMADAQGYVAMPNVDPVAETVNMIAASRSYQANI 120

Query: 116 QTIKQSHDMMTTTLDLLRD 134
           + +  +  +M  TL + + 
Sbjct: 121 EVLNTAKQLMQRTLTIGQS 139


>gi|317406203|gb|EFV86452.1| flagellar basal-body rod protein FlgC [Achromobacter xylosoxidans
           C54]
          Length = 139

 Score =  110 bits (275), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 45/139 (32%), Positives = 72/139 (51%), Gaps = 6/139 (4%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRK------TISFEEVM 55
             L++   IA S L+ QS RM + + N+ANA +     G     R+        + + + 
Sbjct: 1   MSLLSIFDIAGSALSAQSQRMNVAASNMANADSVVGPDGQPYRARQVVFQVNPPAGQALG 60

Query: 56  HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
              GGVRV  + VDQS   + +DP HP+A+A G V  PNV+ + ET +M   +R Y AN+
Sbjct: 61  REIGGVRVAGVVVDQSPLKQVYDPKHPLADAQGYVSMPNVDPVAETVNMIAASRSYQANV 120

Query: 116 QTIKQSHDMMTTTLDLLRD 134
           + +  +  +M  TL + + 
Sbjct: 121 EVLNTAKSLMQKTLTIGQS 139


>gi|302392398|ref|YP_003828218.1| flagellar basal-body rod protein FlgC [Acetohalobium arabaticum DSM
           5501]
 gi|302204475|gb|ADL13153.1| flagellar basal-body rod protein FlgC [Acetohalobium arabaticum DSM
           5501]
          Length = 145

 Score =  110 bits (275), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 39/145 (26%), Positives = 61/145 (42%), Gaps = 13/145 (8%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKT------------- 48
             L +  ++++SG+  Q  RM +IS NIAN  TT    G    ++               
Sbjct: 1   MGLFSGMNVSSSGMTAQRLRMDLISNNIANINTTRTDDGGPYKKKSPVFKAKNDQGFSLP 60

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            S  +      GV V  I          ++P HP AN  G V+ PN+++  E  DM   +
Sbjct: 61  NSDAQSNQVGQGVEVSSIKESSKPPKLVYNPQHPDANEEGYVEMPNIDIASEMVDMVSAS 120

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R Y AN+  +  S  M  + L + +
Sbjct: 121 RAYEANVTALNTSKQMAKSALKIGK 145


>gi|220934392|ref|YP_002513291.1| flagellar basal-body rod protein FlgC [Thioalkalivibrio sp.
           HL-EbGR7]
 gi|219995702|gb|ACL72304.1| flagellar basal-body rod protein FlgC [Thioalkalivibrio sp.
           HL-EbGR7]
          Length = 139

 Score =  110 bits (275), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 39/139 (28%), Positives = 65/139 (46%), Gaps = 5/139 (3%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M  L     ++ S L+ QS R+  I+ N+ANA+    TP      +  +    +      
Sbjct: 1   MSNLFKIFDVSGSALSAQSVRLNAIASNMANAQVASQTPEGAYRAKHPVFASVLQAAGQS 60

Query: 61  -----VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
                VRV  +   Q+  V E+ P HP+AN  G +  PNV+V+ E A+M   +R Y  N+
Sbjct: 61  GSATPVRVVNVLESQAEPVAEYAPNHPLANEQGYIFKPNVSVVEEMANMISASRSYQNNV 120

Query: 116 QTIKQSHDMMTTTLDLLRD 134
           + +  +  ++  TL L + 
Sbjct: 121 EVMNTTKQLLLRTLQLGQS 139


>gi|113969604|ref|YP_733397.1| flagellar basal body rod protein FlgC [Shewanella sp. MR-4]
 gi|114046836|ref|YP_737386.1| flagellar basal body rod protein FlgC [Shewanella sp. MR-7]
 gi|113884288|gb|ABI38340.1| flagellar basal-body rod protein FlgC [Shewanella sp. MR-4]
 gi|113888278|gb|ABI42329.1| flagellar basal-body rod protein FlgC [Shewanella sp. MR-7]
          Length = 138

 Score =  110 bits (275), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 43/138 (31%), Positives = 66/138 (47%), Gaps = 6/138 (4%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-- 59
             L +   +A SG++ QS R+   + NIANA +   +       R  I   E+       
Sbjct: 1   MSLFSIFDVAGSGMSAQSVRLNTTASNIANADSVSSSIDKTYRSRHPIFEAEMAKAQSQQ 60

Query: 60  ----GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
               GV VK I       ++E+ P HP+A+A G +  PNVNV+ E ADM   +R Y  N+
Sbjct: 61  QASQGVAVKGIVESDKPLLKEYSPDHPMADADGFIYKPNVNVMEEMADMISASRSYQMNV 120

Query: 116 QTIKQSHDMMTTTLDLLR 133
           Q  + +  M+  TL + +
Sbjct: 121 QVAEAAKSMLQQTLGMGK 138


>gi|218516085|ref|ZP_03512925.1| flagellar basal body rod protein FlgC [Rhizobium etli 8C-3]
          Length = 132

 Score =  110 bits (275), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 81/131 (61%), Positives = 102/131 (77%), Gaps = 3/131 (2%)

Query: 7   SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV---RV 63
           +  IA SGL  QS R++I+SENIANAR+TGDTPG+DPYRRKTI+F + M  + GV    V
Sbjct: 1   AMKIAGSGLEAQSTRLRIVSENIANARSTGDTPGADPYRRKTITFGQQMDRASGVETVNV 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
           KK+GVD+  F  EFDP +P A+A G+VK PNVNVLVE ADMRE NR Y ANLQTIKQ+ D
Sbjct: 61  KKVGVDEGDFSTEFDPSNPAADAKGVVKLPNVNVLVEMADMREANRSYDANLQTIKQTRD 120

Query: 124 MMTTTLDLLRD 134
           ++++T+DLL+ 
Sbjct: 121 LISSTIDLLKS 131


>gi|160896081|ref|YP_001561663.1| flagellar basal-body rod protein FlgC [Delftia acidovorans SPH-1]
 gi|160361665|gb|ABX33278.1| flagellar basal-body rod protein FlgC [Delftia acidovorans SPH-1]
          Length = 134

 Score =  110 bits (275), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 35/134 (26%), Positives = 63/134 (47%), Gaps = 2/134 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-- 59
             + +   I+ S ++ QS R+ +++ N+AN        G     R+ +     M   G  
Sbjct: 1   MSMFSIFSISGSAVSAQSQRLNVVASNLANVDAVAGPDGKAYQARQVVFQTVAMGEEGSS 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GVRV  I  D +      DP HP+A+A G V + NV+ + E  +M   +R Y  N++ + 
Sbjct: 61  GVRVSAISQDNTPGRRIHDPQHPLADAEGYVTHSNVSAVDEMVNMISASRSYQNNVEVMN 120

Query: 120 QSHDMMTTTLDLLR 133
            +  ++  TL + +
Sbjct: 121 TTKSLLLKTLQMGQ 134


>gi|121533765|ref|ZP_01665592.1| flagellar basal-body rod protein FlgC [Thermosinus carboxydivorans
           Nor1]
 gi|121307756|gb|EAX48671.1| flagellar basal-body rod protein FlgC [Thermosinus carboxydivorans
           Nor1]
          Length = 143

 Score =  110 bits (275), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 51/143 (35%), Positives = 66/143 (46%), Gaps = 11/143 (7%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-- 59
             L  +   A SG+  +  RM +IS NIANA TT    G    R+  I        S   
Sbjct: 1   MGLFTAIDAAASGMTAERLRMDVISNNIANANTTRTPEGGPYRRQMVIFQPRAGQNSFAD 60

Query: 60  ---------GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRL 110
                    GVRV  I  D++ F + FDP HP ANA+G V  PNVN++ E  DM    R 
Sbjct: 61  LLSGKVENVGVRVVGIVKDEAPFRQVFDPNHPDANAAGYVAMPNVNIIAEMVDMMTAARA 120

Query: 111 YMANLQTIKQSHDMMTTTLDLLR 133
           Y AN+  I  +  M    L++ R
Sbjct: 121 YEANVTAINAAKSMALKALEIGR 143


>gi|148256779|ref|YP_001241364.1| flagellar basal body rod protein FlgC [Bradyrhizobium sp. BTAi1]
 gi|146408952|gb|ABQ37458.1| flagellar basal-body rod protein FlgC (cell-proximal rod protein)
           [Bradyrhizobium sp. BTAi1]
          Length = 141

 Score =  110 bits (275), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 63/135 (46%), Positives = 83/135 (61%), Gaps = 3/135 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
              + S  IA SGL  Q+ RM++ISENIANA +T    G DPYRRK  +F   +  +   
Sbjct: 6   SDFVRSMSIATSGLRAQAGRMRVISENIANADSTAAKAGGDPYRRKVPTFSSALDRALDA 65

Query: 62  RVK---KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
           +V    K+  DQS+F  ++DP +P A+ASG VKYPNVN LVE  DMR+  R Y ANL  I
Sbjct: 66  KVVTLGKVVPDQSSFRVKYDPSNPAADASGNVKYPNVNPLVEMTDMRDAQRSYEANLNII 125

Query: 119 KQSHDMMTTTLDLLR 133
             +  M+  TLD+L+
Sbjct: 126 GATRRMIQRTLDILK 140


>gi|269792948|ref|YP_003317852.1| flagellar basal-body rod protein FlgC [Thermanaerovibrio
           acidaminovorans DSM 6589]
 gi|269100583|gb|ACZ19570.1| flagellar basal-body rod protein FlgC [Thermanaerovibrio
           acidaminovorans DSM 6589]
          Length = 139

 Score =  110 bits (275), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 49/135 (36%), Positives = 62/135 (45%), Gaps = 6/135 (4%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM------HGS 58
             S  +A S L      M  IS N+AN  TT    G    RR  I  E +M        S
Sbjct: 4   FRSVDVAGSALTAHRVWMDAISSNLANVNTTRTPEGGPYVRRVPIFQERLMAAMKDGSTS 63

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
            GV+V  I  D       + P HP AN  G V YPNVNV+ E ADM   +R Y ANL  +
Sbjct: 64  SGVKVVAIERDPLPPRMVYQPDHPDANQEGYVAYPNVNVVREMADMMVASRAYEANLTVV 123

Query: 119 KQSHDMMTTTLDLLR 133
           +    M  + +D++R
Sbjct: 124 ETGKAMWNSAIDIMR 138


>gi|52080221|ref|YP_079012.1| flagellar basal body rod protein FlgC [Bacillus licheniformis ATCC
           14580]
 gi|52785598|ref|YP_091427.1| flagellar basal body rod protein FlgC [Bacillus licheniformis ATCC
           14580]
 gi|319646000|ref|ZP_08000230.1| flagellar basal-body rod protein [Bacillus sp. BT1B_CT2]
 gi|52003432|gb|AAU23374.1| flagellar basal-body rod protein [Bacillus licheniformis ATCC
           14580]
 gi|52348100|gb|AAU40734.1| FlgC [Bacillus licheniformis ATCC 14580]
 gi|317391750|gb|EFV72547.1| flagellar basal-body rod protein [Bacillus sp. BT1B_CT2]
          Length = 150

 Score =  110 bits (275), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 46/150 (30%), Positives = 66/150 (44%), Gaps = 18/150 (12%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDT---PGSDPYRRK----------- 47
             +  S +I+ S L  Q  RM  +S N+AN  TT          PYRRK           
Sbjct: 1   MGVFNSINISASALTAQRVRMDTVSSNLANMDTTRAKLVDGQWQPYRRKLVSTAPKGESF 60

Query: 48  ----TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETAD 103
                 S         GV+V KI  D++ F   +DP HP AN  G V+ PNV+ L E  D
Sbjct: 61  SSVLQSSMNASARVGEGVKVTKISEDKTPFKLVYDPTHPDANEDGYVQMPNVDPLKEMVD 120

Query: 104 MRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  + R Y AN+  +  +  M+   L++ +
Sbjct: 121 LMSSTRSYEANVTAMNATKGMLMKALEIGK 150


>gi|207728344|ref|YP_002256738.1| flagellar basal-body rod protein flgc [Ralstonia solanacearum
           MolK2]
 gi|207739739|ref|YP_002258132.1| flagellar basal-body rod protein flgc [Ralstonia solanacearum
           IPO1609]
 gi|206591590|emb|CAQ57202.1| flagellar basal-body rod protein flgc [Ralstonia solanacearum
           MolK2]
 gi|206593121|emb|CAQ60027.1| flagellar basal-body rod protein flgc [Ralstonia solanacearum
           IPO1609]
          Length = 168

 Score =  110 bits (275), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 38/135 (28%), Positives = 62/135 (45%), Gaps = 3/135 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV--MHGSG 59
             L     +A S L  QS RM +++ N+ANA +     G+    ++ +   E      + 
Sbjct: 34  MSLFKVMDVAGSALTAQSKRMNVVASNLANAESVTGPDGTAYRAKQVVFSPEQGTDGYAT 93

Query: 60  GVRVKKIGVDQ-STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
           GV V  +  D  +       PG+P+A+A G V  PNV+V+ E  +M   +R Y AN++  
Sbjct: 94  GVSVDGVVEDTVTPMKRMHQPGNPLADADGYVTMPNVDVVDEMVNMISASRSYQANVEVA 153

Query: 119 KQSHDMMTTTLDLLR 133
             +  M    L L +
Sbjct: 154 NTTKTMAAKALTLGQ 168


>gi|223040442|ref|ZP_03610716.1| flagellar basal-body rod protein FlgC [Campylobacter rectus RM3267]
 gi|222878292|gb|EEF13399.1| flagellar basal-body rod protein FlgC [Campylobacter rectus RM3267]
          Length = 165

 Score =  110 bits (275), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 48/164 (29%), Positives = 70/164 (42%), Gaps = 31/164 (18%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF--------- 51
           M   ++   I+  GL+ Q  RM +IS NIANA T     G    RR+ I           
Sbjct: 1   MSNYLSDFDISGYGLSAQRFRMNVISSNIANANTVRTAEGGPYRRREVIFKAVDFDSVLN 60

Query: 52  ----------------------EEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGI 89
                                 ++       V V KI  D   F  ++DP HP A+A G 
Sbjct: 61  DEVAKKHNLLEYENPLDDKSYTKDAKPAIMSVVVDKIVRDDKDFKLKYDPSHPDADARGY 120

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           V YPN+N ++E AD+ E  R Y AN+   + +  +  + L+LL+
Sbjct: 121 VAYPNINPVIEMADLIEATRAYQANVSAFQSAKTIAQSALELLQ 164


>gi|312115251|ref|YP_004012847.1| flagellar basal-body rod protein FlgC [Rhodomicrobium vannielii
           ATCC 17100]
 gi|311220380|gb|ADP71748.1| flagellar basal-body rod protein FlgC [Rhodomicrobium vannielii
           ATCC 17100]
          Length = 139

 Score =  110 bits (275), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 68/136 (50%), Positives = 91/136 (66%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD L AS  IA SGL+ QS R+++ +EN+AN+ +TG TPG+ PY RK +SF++ +  + G
Sbjct: 3   MDNLSASLAIAGSGLSAQSQRIRVATENLANSESTGKTPGALPYTRKILSFDQELDAATG 62

Query: 61  VRVKKIGV---DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
             +  IG    D+S +  E  PGHP A+A G VK PNVNVLVE AD+RE  R Y ANLQ 
Sbjct: 63  AELVIIGDVDADRSPYRIENIPGHPAADAQGNVKLPNVNVLVELADIREGTRSYEANLQV 122

Query: 118 IKQSHDMMTTTLDLLR 133
           IKQ   + T T+D+L+
Sbjct: 123 IKQVRHLETLTIDILK 138


>gi|146341894|ref|YP_001206942.1| flagellar basal body rod protein FlgC [Bradyrhizobium sp. ORS278]
 gi|146194700|emb|CAL78725.1| flagellar basal-body rod protein FlgC (cell-proximal rod protein)
           [Bradyrhizobium sp. ORS278]
          Length = 141

 Score =  110 bits (275), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 62/135 (45%), Positives = 83/135 (61%), Gaps = 3/135 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
              + S  IA SGL  Q+ RM++ISENIANA +T    G DPYRRK  +F   +  +   
Sbjct: 6   SDFLRSMTIATSGLRAQAGRMRVISENIANADSTAAKAGGDPYRRKVPTFTSALDRALDA 65

Query: 62  RVK---KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
           +V    K+  DQS+F  ++DP +P A+ASG VKYPNVN L+E  DMR+  R Y ANL  I
Sbjct: 66  KVVTLGKVVPDQSSFRVKYDPSNPAADASGNVKYPNVNPLIEMTDMRDAQRSYEANLNII 125

Query: 119 KQSHDMMTTTLDLLR 133
             +  M+  TLD+L+
Sbjct: 126 GATRRMIQRTLDILK 140


>gi|39936948|ref|NP_949224.1| flagellar basal body rod protein FlgC [Rhodopseudomonas palustris
           CGA009]
 gi|192292776|ref|YP_001993381.1| flagellar basal body rod protein FlgC [Rhodopseudomonas palustris
           TIE-1]
 gi|39650805|emb|CAE29328.1| flagellar basal-body rod protein flgC [Rhodopseudomonas palustris
           CGA009]
 gi|192286525|gb|ACF02906.1| flagellar basal-body rod protein FlgC [Rhodopseudomonas palustris
           TIE-1]
          Length = 141

 Score =  110 bits (275), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 58/135 (42%), Positives = 82/135 (60%), Gaps = 3/135 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
           +    S  IA SGL  Q+ RM++ISEN+ANA +T   PG DPYRRK  +F   +  +   
Sbjct: 6   NDFARSMGIATSGLRAQAGRMRVISENVANADSTAQNPGGDPYRRKVPTFTSALDRTLDA 65

Query: 62  RVK---KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
           RV    ++  D S F  +++P +P A+A+G VKYPNVN ++E  DMR+  R Y ANL  I
Sbjct: 66  RVVALGRVKPDTSAFRVKYEPTNPAADANGNVKYPNVNPVIEMTDMRDAQRSYEANLNVI 125

Query: 119 KQSHDMMTTTLDLLR 133
             +  M+  TLD+L+
Sbjct: 126 SATRRMIQRTLDILK 140


>gi|115353120|ref|YP_774959.1| flagellar basal body rod protein FlgC [Burkholderia ambifaria AMMD]
 gi|170703094|ref|ZP_02893914.1| flagellar basal-body rod protein FlgC [Burkholderia ambifaria
           IOP40-10]
 gi|171321836|ref|ZP_02910737.1| flagellar basal-body rod protein FlgC [Burkholderia ambifaria
           MEX-5]
 gi|172061974|ref|YP_001809626.1| flagellar basal body rod protein FlgC [Burkholderia ambifaria
           MC40-6]
 gi|115283108|gb|ABI88625.1| flagellar basal-body rod protein FlgC [Burkholderia ambifaria AMMD]
 gi|170131991|gb|EDT00499.1| flagellar basal-body rod protein FlgC [Burkholderia ambifaria
           IOP40-10]
 gi|171092874|gb|EDT38126.1| flagellar basal-body rod protein FlgC [Burkholderia ambifaria
           MEX-5]
 gi|171994491|gb|ACB65410.1| flagellar basal-body rod protein FlgC [Burkholderia ambifaria
           MC40-6]
          Length = 141

 Score =  110 bits (274), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 43/140 (30%), Positives = 71/140 (50%), Gaps = 8/140 (5%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM----- 55
           M  L+    +A S L+ QS R+ + + N+ANA +     G     ++ +   + M     
Sbjct: 1   MPSLMNIFGVAGSALSAQSQRLNVTASNLANADSATGPDGKPYKAKQVVFATDPMGGART 60

Query: 56  ---HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
               G GGVRV K+  D S     +DP +P A+A+G V+ PNV+ + E  +M   +R Y 
Sbjct: 61  ASGQGVGGVRVTKVMDDPSPMKSTYDPANPSADANGYVQMPNVDPVQEMVNMISASRSYQ 120

Query: 113 ANLQTIKQSHDMMTTTLDLL 132
           AN++T+  +  +M  TL + 
Sbjct: 121 ANVETLNTAKTLMLKTLTIG 140


>gi|188581884|ref|YP_001925329.1| flagellar basal body rod protein FlgC [Methylobacterium populi
           BJ001]
 gi|179345382|gb|ACB80794.1| flagellar basal-body rod protein FlgC [Methylobacterium populi
           BJ001]
          Length = 136

 Score =  110 bits (274), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 61/136 (44%), Positives = 82/136 (60%), Gaps = 4/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD+L  S  IA SGL  QS RM+II+ENIANA +   TPG DPYRRK  +F         
Sbjct: 1   MDFL-KSLGIAASGLKAQSGRMRIIAENIANADSAAQTPGGDPYRRKIPTFTNRFDRELN 59

Query: 61  VRVK---KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
             V    ++  D + F  ++DPG+P A+A G V+ PNVN L+E  DMRE  R Y ANL  
Sbjct: 60  ASVVEAGRVRRDPTPFRTKYDPGNPAADARGEVRLPNVNGLIENMDMREAQRSYEANLNM 119

Query: 118 IKQSHDMMTTTLDLLR 133
           +  +  M++ TL++L+
Sbjct: 120 VTATRRMISRTLEILK 135


>gi|289208112|ref|YP_003460178.1| flagellar basal-body rod protein FlgC [Thioalkalivibrio sp. K90mix]
 gi|288943743|gb|ADC71442.1| flagellar basal-body rod protein FlgC [Thioalkalivibrio sp. K90mix]
          Length = 139

 Score =  110 bits (274), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 38/138 (27%), Positives = 65/138 (47%), Gaps = 5/138 (3%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG--- 57
           M  L    + + S L  QS R+  ++ N+ANA T    P      ++ +    +      
Sbjct: 1   MSDLFNLFNTSASALTAQSVRLNTVASNLANANTVATNPDEAYRAKQVLFQTVMNQADPN 60

Query: 58  --SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
             S GVRV  I   Q+     ++P HP AN  G +  P ++V+ E A+M   +R Y AN+
Sbjct: 61  GASNGVRVAGIDESQAPPQPHYEPNHPQANEDGYIFRPAISVVEEMANMMSASRNYEANV 120

Query: 116 QTIKQSHDMMTTTLDLLR 133
           + ++ S  ++  TL + +
Sbjct: 121 EVMETSRQLLQRTLQIGQ 138


>gi|297538894|ref|YP_003674663.1| flagellar basal-body rod protein FlgC [Methylotenera sp. 301]
 gi|297258241|gb|ADI30086.1| flagellar basal-body rod protein FlgC [Methylotenera sp. 301]
          Length = 135

 Score =  110 bits (274), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 38/134 (28%), Positives = 66/134 (49%), Gaps = 2/134 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM--HGSG 59
             L    +I+ S ++ Q+ R+  ++ N+ANA +     G+    ++ +          + 
Sbjct: 1   MSLFNVFNISGSAMSAQAQRLNTVASNLANADSATSANGTPYKAKQVVFSATPTGSPDAS 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GV+V K+  D S     +DP HP+AN  G V  PNVNV  E  +M   +R Y  N++T+ 
Sbjct: 61  GVKVLKVIEDNSPAKVVYDPKHPLANDKGYVTMPNVNVTEEMVNMISASRAYQNNVETMN 120

Query: 120 QSHDMMTTTLDLLR 133
            +  M+  TL + +
Sbjct: 121 AAKTMLLKTLTIGQ 134


>gi|152980444|ref|YP_001353109.1| FlgC flagellar basal body rod protein [Janthinobacterium sp.
           Marseille]
 gi|151280521|gb|ABR88931.1| FlgC flagellar basal body rod protein [Janthinobacterium sp.
           Marseille]
          Length = 135

 Score =  110 bits (274), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 44/135 (32%), Positives = 69/135 (51%), Gaps = 3/135 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH---GS 58
             L    +++ S ++ QS R+ ++S NIANA +T    G     ++     + M     S
Sbjct: 1   MSLFNIFNVSGSAMSAQSQRLNVVSSNIANAESTTSADGKTYRAKQVEFQAQQMKGGATS 60

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
            GVRV ++  D S     FDP HP A+ +G V  PNVNV+ E  +M   +R Y  N++T+
Sbjct: 61  TGVRVNRVVEDTSPLKMVFDPKHPNADETGHVAMPNVNVVEEMVNMISASRSYQTNVETM 120

Query: 119 KQSHDMMTTTLDLLR 133
             +  M+  TL L +
Sbjct: 121 NTAKTMLLKTLTLGQ 135


>gi|107023955|ref|YP_622282.1| flagellar basal body rod protein FlgC [Burkholderia cenocepacia AU
           1054]
 gi|116691042|ref|YP_836665.1| flagellar basal body rod protein FlgC [Burkholderia cenocepacia
           HI2424]
 gi|170734376|ref|YP_001766323.1| flagellar basal body rod protein FlgC [Burkholderia cenocepacia
           MC0-3]
 gi|206558966|ref|YP_002229726.1| flagellar basal body rod protein FlgC [Burkholderia cenocepacia
           J2315]
 gi|105894144|gb|ABF77309.1| flagellar basal-body rod protein FlgC [Burkholderia cenocepacia AU
           1054]
 gi|116649131|gb|ABK09772.1| flagellar basal-body rod protein FlgC [Burkholderia cenocepacia
           HI2424]
 gi|169817618|gb|ACA92201.1| flagellar basal-body rod protein FlgC [Burkholderia cenocepacia
           MC0-3]
 gi|198035003|emb|CAR50875.1| flagellar basal-body rod protein FlgC (putative proximal rod
           protein) [Burkholderia cenocepacia J2315]
          Length = 141

 Score =  110 bits (274), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 43/140 (30%), Positives = 71/140 (50%), Gaps = 8/140 (5%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM----- 55
           M  L+    +A S L+ QS R+ + + N+ANA +     G     ++ +   + M     
Sbjct: 1   MPSLMNIFGVAGSALSAQSQRLNVTASNLANADSATGPDGKPYKAKQVVFATDPMGGART 60

Query: 56  ---HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
               G GGVRV K+  D S     +DP +P A+A+G V+ PNV+ + E  +M   +R Y 
Sbjct: 61  ASGQGVGGVRVTKVMDDPSPMKSTYDPANPAADANGYVQMPNVDPVQEMVNMISASRSYQ 120

Query: 113 ANLQTIKQSHDMMTTTLDLL 132
           AN++T+  +  +M  TL + 
Sbjct: 121 ANVETLNTAKTLMLKTLTIG 140


>gi|116694217|ref|YP_728428.1| flagellar basal body rod protein [Ralstonia eutropha H16]
 gi|113528716|emb|CAJ95063.1| flagellar basal body rod protein [Ralstonia eutropha H16]
          Length = 135

 Score =  109 bits (273), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 41/135 (30%), Positives = 66/135 (48%), Gaps = 3/135 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--- 58
              +    +A S +A QS RM + + N+ANA +     G     ++ +       G    
Sbjct: 1   MPAMNIFDVAGSAMAAQSQRMNVTASNLANADSVVSPDGQAYRAKQVVFGMAPTPGQTDI 60

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
           GGV+V+ +  D S      +P HP+ANA G V  PNVN + E  +M   +R Y AN++ +
Sbjct: 61  GGVQVRGVSEDPSPPRMVHNPTHPMANAQGYVVMPNVNPVEEMVNMISASRSYQANVEVL 120

Query: 119 KQSHDMMTTTLDLLR 133
             + +MM  TL + +
Sbjct: 121 NTAKNMMLKTLTIGQ 135


>gi|226939376|ref|YP_002794449.1| FlgC1 [Laribacter hongkongensis HLHK9]
 gi|226714302|gb|ACO73440.1| FlgC1 [Laribacter hongkongensis HLHK9]
          Length = 137

 Score =  109 bits (273), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 39/137 (28%), Positives = 62/137 (45%), Gaps = 4/137 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRK----TISFEEVMHG 57
             L     IA S L  QS R+ +++ NIAN  +   + G     R+     I        
Sbjct: 1   MSLNRVLDIAGSALTAQSKRLNVVASNIANVDSAVASNGEPYKARRIVFTPIPVSPAEPK 60

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
              V V  I  DQS     ++P HP+A+A+G V  PN+N + E  DM   +R Y  N++ 
Sbjct: 61  VAKVAVTAIVEDQSPPRMNYNPAHPLADANGYVTMPNINPVEEMTDMISASRAYQTNVEM 120

Query: 118 IKQSHDMMTTTLDLLRD 134
           +  +  ++  TL + + 
Sbjct: 121 MNTTKQLLQKTLSIGQS 137


>gi|104782845|ref|YP_609343.1| flagellar basal body rod protein FlgC [Pseudomonas entomophila L48]
 gi|95111832|emb|CAK16556.1| flagellar cell-proximal portion of basal-body rod FlgC [Pseudomonas
           entomophila L48]
          Length = 147

 Score =  109 bits (273), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 46/147 (31%), Positives = 66/147 (44%), Gaps = 15/147 (10%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             L +  +IA SG++ Q+ R+  ++ NIANA T   +       R  +         GGV
Sbjct: 1   MSLASVFNIAGSGMSAQNTRLNTVASNIANAETVSSSLDQTYRARHPVFATTFQQAQGGV 60

Query: 62  ---------------RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
                          +VK I  DQS     ++P HP AN  G V YPNVNV+ E ADM  
Sbjct: 61  GQSLFEDQGEAGQGVQVKGIIEDQSNLEARYEPNHPAANKDGYVYYPNVNVVEEMADMIS 120

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
            +R +  N + +  +  MM   L L +
Sbjct: 121 ASRAFQTNAELMNTAKTMMQKVLTLGQ 147


>gi|296103613|ref|YP_003613759.1| Flagellar basal-body rod protein, FlgC [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
 gi|295058072|gb|ADF62810.1| Flagellar basal-body rod protein, FlgC [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
          Length = 134

 Score =  109 bits (273), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 37/134 (27%), Positives = 66/134 (49%), Gaps = 2/134 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM--HGSG 59
             L +   I+ S +A QS R+ + + N+ANA +     G     R+ +   +       G
Sbjct: 1   MSLFSVFDISGSAMAAQSRRLNVSASNMANADSVAGPDGQPYRARQVVFSVDASVGQEIG 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GV+V  +    +     ++PG+P+A+  G V+ PNVNV+ E  +    +R Y AN++ + 
Sbjct: 61  GVQVSDVVESSAPDRLVYEPGNPLADEQGYVRMPNVNVMNEMVNTISASRSYQANVEVMN 120

Query: 120 QSHDMMTTTLDLLR 133
            +  +M  TL L +
Sbjct: 121 SAKSLMLKTLTLGQ 134


>gi|309388815|gb|ADO76695.1| flagellar basal-body rod protein FlgC [Halanaerobium praevalens DSM
           2228]
          Length = 143

 Score =  109 bits (273), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 52/141 (36%), Positives = 71/141 (50%), Gaps = 13/141 (9%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH------- 56
           +     I+ SGL  Q  RM  IS NIANA TT D  G+   R+  I  +++ +       
Sbjct: 1   MFKGIDISASGLTAQRLRMDTISSNIANAETTRDENGNTYRRKTPIFRQKLENKMGAAEV 60

Query: 57  ------GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRL 110
                  SGGV V +I  DQS F  E+ P HP AN  G V+ PNV+V+ E  +M + +R 
Sbjct: 61  GNGSSLNSGGVEVDQIAEDQSPFRLEYRPNHPDANEEGYVELPNVSVMTEMVNMIDASRA 120

Query: 111 YMANLQTIKQSHDMMTTTLDL 131
           Y AN Q I     M  + L++
Sbjct: 121 YEANTQAISNYKSMANSALNI 141


>gi|300114801|ref|YP_003761376.1| flagellar basal-body rod protein FlgC [Nitrosococcus watsonii
           C-113]
 gi|299540738|gb|ADJ29055.1| flagellar basal-body rod protein FlgC [Nitrosococcus watsonii
           C-113]
          Length = 137

 Score =  109 bits (273), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 35/137 (25%), Positives = 65/137 (47%), Gaps = 5/137 (3%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH----- 56
             L     IA + ++ Q+ R+   + N+ANA +   +       R+ +    +       
Sbjct: 1   MSLFKVFDIAGTAMSAQTLRLNTTASNLANADSVSSSIHQTYRARQPVFATLLDELNPAA 60

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
            +GGV+V  +    +   +E+ P HP+AN +G + +PNVN + E A+M   +R Y  N++
Sbjct: 61  PAGGVQVLGVVESGAPLQQEYAPDHPMANEAGYIFHPNVNSIEEMANMISASRSYQNNVE 120

Query: 117 TIKQSHDMMTTTLDLLR 133
               S  ++  TL L +
Sbjct: 121 MANTSKQLLLRTLQLGQ 137


>gi|221069324|ref|ZP_03545429.1| flagellar basal-body rod protein FlgC [Comamonas testosteroni KF-1]
 gi|264676568|ref|YP_003276474.1| flagellar basal-body rod protein FlgC [Comamonas testosteroni
           CNB-2]
 gi|299531288|ref|ZP_07044698.1| flagellar basal-body rod protein FlgC [Comamonas testosteroni S44]
 gi|220714347|gb|EED69715.1| flagellar basal-body rod protein FlgC [Comamonas testosteroni KF-1]
 gi|262207080|gb|ACY31178.1| flagellar basal-body rod protein FlgC [Comamonas testosteroni
           CNB-2]
 gi|298720695|gb|EFI61642.1| flagellar basal-body rod protein FlgC [Comamonas testosteroni S44]
          Length = 134

 Score =  109 bits (273), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 34/134 (25%), Positives = 65/134 (48%), Gaps = 2/134 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM--HGSG 59
             + +  +I+ S ++ QS R+ +++ N+AN        GS    R+ +     M   GS 
Sbjct: 1   MSMFSIFNISGSAVSAQSQRLNVVASNLANVDAVAGPDGSVYKARQVVFQTVPMGNDGSA 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GV+V  I  D +      DP +P+A+  G V + NV+ + E  +M   +R Y  N++ + 
Sbjct: 61  GVKVNAISEDNTPGRRIHDPSNPLADGEGYVTHSNVSAVDEMVNMISASRSYQNNVEVMN 120

Query: 120 QSHDMMTTTLDLLR 133
            +  ++  TL + +
Sbjct: 121 TAKTLLLKTLQMGQ 134


>gi|294140182|ref|YP_003556160.1| flagellar basal-body rod protein FlgC [Shewanella violacea DSS12]
 gi|293326651|dbj|BAJ01382.1| flagellar basal-body rod protein FlgC [Shewanella violacea DSS12]
          Length = 138

 Score =  109 bits (273), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 41/138 (29%), Positives = 67/138 (48%), Gaps = 6/138 (4%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV------M 55
             L    ++A SG++ QS R+   + NIANA +   +       R  I   E+       
Sbjct: 1   MSLFNIFNVAGSGMSAQSIRLNTTASNIANADSVSSSVDKTYRARHPIFEAEMAKASYQQ 60

Query: 56  HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
             S  V+VK I    +  ++E+ P HP+A+  G +  PNVNV+ E A+M   +R Y  N+
Sbjct: 61  QSSPSVKVKGIVESDAPLLKEYSPNHPMADGDGFIYKPNVNVMEEMANMISASRSYQMNV 120

Query: 116 QTIKQSHDMMTTTLDLLR 133
           Q  + +  M+  TL + +
Sbjct: 121 QVAEAAKSMLQQTLRIGK 138


>gi|319409189|emb|CBI82833.1| Flagellar basal-body rod protein flgC [Bartonella schoenbuchensis
           R1]
          Length = 137

 Score =  109 bits (273), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 69/135 (51%), Positives = 102/135 (75%), Gaps = 3/135 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG---S 58
           D LIA+  +A +GL+ QS R++II+EN+ANA +TG +PG+ PYRRKT+SFE  ++    +
Sbjct: 3   DRLIAAEQVATTGLSAQSMRLRIIAENLANANSTGKSPGASPYRRKTVSFEAALNPHSDA 62

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
            GV+V +IG D++ F+  ++PGH  A+++G VKYPNVN +VE ADMRE NR Y ANLQ +
Sbjct: 63  QGVQVTRIGNDKAPFIMRYEPGHLAADSNGYVKYPNVNSIVEMADMREANRSYEANLQVV 122

Query: 119 KQSHDMMTTTLDLLR 133
           +Q  D+++ T+DLL+
Sbjct: 123 RQVRDLVSQTIDLLK 137


>gi|304438470|ref|ZP_07398410.1| flagellar basal-body rod protein FlgC [Selenomonas sp. oral taxon
           149 str. 67H29BP]
 gi|304368553|gb|EFM22238.1| flagellar basal-body rod protein FlgC [Selenomonas sp. oral taxon
           149 str. 67H29BP]
          Length = 151

 Score =  109 bits (273), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 48/148 (32%), Positives = 63/148 (42%), Gaps = 17/148 (11%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE--------- 52
             +      A SGL  +  RM +IS NIANA TT    G   +RR  +            
Sbjct: 1   MGMFLGIDTAASGLTAERLRMDVISNNIANANTTRTQGGGAYHRRYVVFQPREKGHGIGF 60

Query: 53  --------EVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
                     M    GVR   I  D +     ++PGHP ANA G V+ PNVN++ E  DM
Sbjct: 61  ESFLARASNRMRPGDGVRAVGIRTDNTQGPLVYEPGHPDANADGYVERPNVNIVAEMVDM 120

Query: 105 RETNRLYMANLQTIKQSHDMMTTTLDLL 132
              +R Y AN  TI  +  M+   L + 
Sbjct: 121 ISASRGYEANTTTINAAKSMVNAALRIG 148


>gi|23009956|ref|ZP_00050814.1| COG1558: Flagellar basal body rod protein [Magnetospirillum
           magnetotacticum MS-1]
          Length = 136

 Score =  109 bits (273), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 62/136 (45%), Positives = 83/136 (61%), Gaps = 4/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD++  S  IA SGL  QS RM+II+ENIANA +T  T G +PYRRK  +F         
Sbjct: 1   MDFM-KSLGIAASGLKAQSGRMRIIAENIANADSTAKTAGGEPYRRKVPTFASRFDRELD 59

Query: 61  VRV---KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
            +V    +I  D S F  ++DPG+P A+A G V+ PNVN L+E  DMRE  R Y ANL  
Sbjct: 60  AKVIEAGRIARDPSPFRTKYDPGNPAADARGEVRLPNVNGLIENMDMREAQRSYEANLNM 119

Query: 118 IKQSHDMMTTTLDLLR 133
           +  +  M++ TLD+L+
Sbjct: 120 VTATRRMISRTLDILK 135


>gi|329297212|ref|ZP_08254548.1| flagellar basal body rod protein FlgC [Plautia stali symbiont]
          Length = 134

 Score =  109 bits (273), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 40/134 (29%), Positives = 67/134 (50%), Gaps = 2/134 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--G 59
             L+    IA S +  QS R+ + + N+ NA +     G     ++ I   +   G+  G
Sbjct: 1   MALLNIFDIAGSAMTAQSQRLNVSASNLDNADSVTGPDGQPYVAKQVIFQTDAAQGAATG 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GV+V  +  D +     +DPG+P+A+  G VK PNV+V+ ET +    +R Y AN++ + 
Sbjct: 61  GVKVAGVVNDPTPAKLVYDPGNPLADQKGYVKMPNVDVVAETVNTMSASRSYQANVEVLN 120

Query: 120 QSHDMMTTTLDLLR 133
               MM  TL + +
Sbjct: 121 TVKSMMMKTLTMGQ 134


>gi|326791545|ref|YP_004309366.1| flagellar basal-body rod protein FlgC [Clostridium lentocellum DSM
           5427]
 gi|326542309|gb|ADZ84168.1| flagellar basal-body rod protein FlgC [Clostridium lentocellum DSM
           5427]
          Length = 145

 Score =  109 bits (273), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 47/145 (32%), Positives = 65/145 (44%), Gaps = 13/145 (8%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--- 58
                S  IA SGL  Q  R+ IIS+N+AN  TT    G    R+  I  +     S   
Sbjct: 1   MGFFDSMDIAASGLTAQRLRLDIISQNMANVNTTRTAEGGPYKRKTVIFEQMQNENSFSS 60

Query: 59  ----------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                      GVRV +I  D+S     ++P HP ANA G V+ PNVN + E  +M   +
Sbjct: 61  ILNKKKQSGVNGVRVARIVEDESQGALVYNPTHPDANAQGYVEMPNVNTVDEMVNMISAS 120

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R Y AN+ +      M    L++ +
Sbjct: 121 RSYEANVTSFNTMKSMFAKALEIGK 145


>gi|83858796|ref|ZP_00952318.1| flagellar basal-body rod protein [Oceanicaulis alexandrii HTCC2633]
 gi|83853619|gb|EAP91471.1| flagellar basal-body rod protein [Oceanicaulis alexandrii HTCC2633]
          Length = 138

 Score =  109 bits (273), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 57/135 (42%), Positives = 83/135 (61%), Gaps = 3/135 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
           D +  +  I+ +GL  QS+RM++I+EN+ANA +T  TP  +PY+R+   FE       G 
Sbjct: 3   DRVSETLQISAAGLRAQSSRMRVIAENVANAESTARTPEENPYQRQIPVFESEFDRQVGT 62

Query: 62  ---RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
              R+  + +D+S F   ++PGHP A+  G VKYPNV+ LVE  DMR+  R Y ANL  +
Sbjct: 63  ELVRMNDVALDESDFRMVYEPGHPAADGEGYVKYPNVSSLVELMDMRDAQRSYEANLTMV 122

Query: 119 KQSHDMMTTTLDLLR 133
           + +  M+  TLDLLR
Sbjct: 123 EGTRRMLERTLDLLR 137


>gi|126463750|ref|YP_001044864.1| flagellar basal body rod protein FlgC [Rhodobacter sphaeroides ATCC
           17029]
 gi|332559806|ref|ZP_08414128.1| flagellar basal body rod protein FlgC2 [Rhodobacter sphaeroides
           WS8N]
 gi|126105414|gb|ABN78092.1| protein of unknown function DUF1078 domain protein [Rhodobacter
           sphaeroides ATCC 17029]
 gi|332277518|gb|EGJ22833.1| flagellar basal body rod protein FlgC2 [Rhodobacter sphaeroides
           WS8N]
          Length = 126

 Score =  109 bits (273), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 54/133 (40%), Positives = 76/133 (57%), Gaps = 8/133 (6%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M  L+ S  ++ SG+  Q+ R++ +SENIANA T G       Y RKT+SF+E    SG 
Sbjct: 1   MTDLLQSLGLSASGMRSQALRLRHVSENIANADTPG-------YHRKTVSFQEDPD-SGL 52

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V    + +D+S   + + PGHP+A   G     NV+++VE AD RE  R Y ANL+   Q
Sbjct: 53  VSTGPVRLDRSELQKIYAPGHPLAGEDGYYDGSNVDLVVEVADAREAQRSYEANLRMFDQ 112

Query: 121 SHDMMTTTLDLLR 133
           +  M  + LDLLR
Sbjct: 113 ARQMTQSLLDLLR 125


>gi|292492361|ref|YP_003527800.1| flagellar basal-body rod protein FlgC [Nitrosococcus halophilus
           Nc4]
 gi|291580956|gb|ADE15413.1| flagellar basal-body rod protein FlgC [Nitrosococcus halophilus
           Nc4]
          Length = 137

 Score =  109 bits (272), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 33/136 (24%), Positives = 64/136 (47%), Gaps = 5/136 (3%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--- 58
             L     I+ + ++ Q+ R+   + N+ANA +   +       R  +    +   +   
Sbjct: 1   MSLFNIIDISGTAMSAQTLRLNTTASNLANADSVSSSVNQTYRARHPVFATVLNDFNQEE 60

Query: 59  --GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
             GGV+V  +   ++   +E+ P HP+AN +G + +PNVN + E A+M   +R Y  +++
Sbjct: 61  ATGGVQVLGVVESKAPLQQEYAPDHPMANEAGYIFHPNVNPIEEMANMISASRSYQNSVE 120

Query: 117 TIKQSHDMMTTTLDLL 132
               S  ++  TL L 
Sbjct: 121 VANTSKQLLLRTLQLG 136


>gi|260682026|ref|YP_003213311.1| flagellar basal-body rod protein [Clostridium difficile CD196]
 gi|260685624|ref|YP_003216757.1| flagellar basal-body rod protein [Clostridium difficile R20291]
 gi|260208189|emb|CBA60524.1| flagellar basal-body rod protein [Clostridium difficile CD196]
 gi|260211640|emb|CBE01891.1| flagellar basal-body rod protein [Clostridium difficile R20291]
          Length = 128

 Score =  109 bits (272), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 45/128 (35%), Positives = 68/128 (53%), Gaps = 2/128 (1%)

Query: 8   AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG--GVRVKK 65
             I+ SGL  +S +M IIS N+AN   T    G    R+     E   +  G  GV+V  
Sbjct: 1   MRISASGLTAESLKMDIISSNVANINATRGPNGEAYRRKVVSFEENYDNKLGMLGVKVTS 60

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           +  D+S   E +DP HP A  +G V+YPNVN+LVE  D+   +R Y +N+ T+     M+
Sbjct: 61  VEDDKSPLKEVYDPSHPDAKPNGYVEYPNVNILVEMTDLITASRAYDSNVDTLNAQKSMI 120

Query: 126 TTTLDLLR 133
           +  L++ +
Sbjct: 121 SKALEIGK 128


>gi|163750572|ref|ZP_02157810.1| flagellar basal-body rod protein FlgC [Shewanella benthica KT99]
 gi|161329727|gb|EDQ00716.1| flagellar basal-body rod protein FlgC [Shewanella benthica KT99]
          Length = 139

 Score =  109 bits (272), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 41/138 (29%), Positives = 67/138 (48%), Gaps = 6/138 (4%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM------ 55
             L    ++A SG++ QS R+   + NIANA +   +       R  I   E++      
Sbjct: 1   MSLFNIFNVAGSGMSAQSIRLNTTASNIANADSVSSSVDKTYRARHPIFAAEMLKASYQQ 60

Query: 56  HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
             S  V VK I    +  ++E+ P HP+A+  G +  PNVNV+ E A+M   +R Y  N+
Sbjct: 61  QSSPSVVVKGIVESDAPLLKEYSPNHPMADGDGFIYKPNVNVMEEMANMISASRSYQMNV 120

Query: 116 QTIKQSHDMMTTTLDLLR 133
           Q  + +  M+  TL + +
Sbjct: 121 QVAEAAKSMLQQTLRIGK 138


>gi|2105146|gb|AAB57897.1| FlgC [Treponema denticola]
          Length = 151

 Score =  109 bits (272), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 46/151 (30%), Positives = 62/151 (41%), Gaps = 19/151 (12%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS----------- 50
             L  S +IA +G+ V+  R  +IS NIANA +     G    R + I            
Sbjct: 1   MGLFTSINIAATGMGVERLRTDVISNNIANASSLETQEGGPFKRSRVIVGQKKSGIDWQT 60

Query: 51  ----FEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVA----NASGIVKYPNVNVLVETA 102
                        GV+V  I  D S  V      HP A       G V+YPNVN++ E  
Sbjct: 61  PFTPQNVERGVGEGVKVLSIEKDTSDTVGFMIRTHPKALKYGPKEGYVEYPNVNIVTEMV 120

Query: 103 DMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           D+   +R Y ANL  +  + DM    LD+ R
Sbjct: 121 DLISASRAYEANLAVVNGAKDMFQRALDIAR 151


>gi|32490788|ref|NP_871042.1| hypothetical protein WGLp039 [Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis]
 gi|25165994|dbj|BAC24185.1| flgC [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 133

 Score =  109 bits (272), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 44/135 (32%), Positives = 74/135 (54%), Gaps = 5/135 (3%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE---EVMHGS 58
             L+    I+ S L  QS R+ + + N+ANA +   +   +PY  K + F+         
Sbjct: 1   MSLLNIFDISGSALIAQSCRLNVSASNMANAESL--SNNGNPYSSKQVVFKLNTNFAQEI 58

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
           GGV+VKKI  D++ +   +DPG+P+A++ G VK  NVN++ E  +   ++R Y AN++ I
Sbjct: 59  GGVKVKKIIEDKTPWKILYDPGNPLADSKGYVKSSNVNMISEMINTISSSRSYQANVEVI 118

Query: 119 KQSHDMMTTTLDLLR 133
             +  M+  TL L +
Sbjct: 119 NTARSMILKTLTLGQ 133


>gi|23092313|gb|AAN08638.1| FlgC [Aeromonas hydrophila]
          Length = 139

 Score =  109 bits (272), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 41/139 (29%), Positives = 70/139 (50%), Gaps = 6/139 (4%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-- 59
             L     IA S ++ QS R+  ++ N+ANA +   +  +  + R+ I   ++       
Sbjct: 1   MSLFKVFDIAGSAMSAQSVRLNTVASNMANADSVSSSVENTYHARRPIFAAQLDQAMSDK 60

Query: 60  ----GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
               GV VK I   ++  ++E++PGHP+A+  G +  PNVN++ E ADM   +R Y  N+
Sbjct: 61  QASVGVEVKGIVESEAPLLKEYNPGHPMADKDGFIFKPNVNMVEEMADMTNASRSYQTNV 120

Query: 116 QTIKQSHDMMTTTLDLLRD 134
           Q    +  M+  TL L + 
Sbjct: 121 QVADSAKKMLQQTLQLGKS 139


>gi|288962707|ref|YP_003453001.1| flagellar basal-body rod protein [Azospirillum sp. B510]
 gi|288914973|dbj|BAI76457.1| flagellar basal-body rod protein [Azospirillum sp. B510]
          Length = 139

 Score =  109 bits (272), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 67/136 (49%), Positives = 87/136 (63%), Gaps = 3/136 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
           D L A+  IA +GL  QS R+++++EN+ANA +T    G DPYRRKT+SF+ VM    G 
Sbjct: 4   DVLGATLKIAGAGLQAQSTRLRVVAENLANADSTATAKGGDPYRRKTVSFDSVMDRGVGA 63

Query: 62  ---RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
              RVK+IG D+S F   +DP HP A+  G VK PNV  LVE  DMRE  R + A++  I
Sbjct: 64  ELVRVKQIGRDRSDFQLAYDPSHPAADDKGYVKKPNVQPLVEMMDMREAGRAFEASMNVI 123

Query: 119 KQSHDMMTTTLDLLRD 134
           +QS  MMT  +DLLR 
Sbjct: 124 EQSRAMMTRVVDLLRS 139


>gi|154686035|ref|YP_001421196.1| flagellar basal body rod protein FlgC [Bacillus amyloliquefaciens
           FZB42]
 gi|154351886|gb|ABS73965.1| FlgC [Bacillus amyloliquefaciens FZB42]
          Length = 150

 Score =  109 bits (272), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 45/147 (30%), Positives = 66/147 (44%), Gaps = 18/147 (12%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGD---TPGSDPYRRKTISFEE-------- 53
             S +I+ S L  Q  RM ++S N+AN  TT          PYRRK +S +         
Sbjct: 4   FQSLNISGSALTAQRVRMDVVSSNLANMDTTRAKQVNGEWVPYRRKLVSLQSGGESFSSL 63

Query: 54  -------VMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
                        GV+V  +  D S F   +DP +P AN  G V+ PNV+ L E  D+  
Sbjct: 64  LHSKMNGTGSAGNGVKVSGVTEDPSAFNLVYDPENPDANKDGYVQKPNVDPLKEMVDLVS 123

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
           + R Y AN+  +  S  M+   L++ +
Sbjct: 124 STRSYEANVTALNASKGMLLKALEIGK 150


>gi|119775452|ref|YP_928192.1| flagellar basal body rod protein FlgC [Shewanella amazonensis SB2B]
 gi|119767952|gb|ABM00523.1| flagellar basal-body rod protein FlgC [Shewanella amazonensis SB2B]
          Length = 137

 Score =  109 bits (272), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 41/137 (29%), Positives = 66/137 (48%), Gaps = 5/137 (3%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV-----MH 56
             L    +++ SG++ QS R+   + NIANA +   +       R  +   E+       
Sbjct: 1   MSLFNIFNVSGSGMSAQSVRLNTTASNIANADSVSSSVDKTYRARHPVFEAELAKASQQQ 60

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
            + GV VK I        +E++P HP+A+A G +  PNVNV+ E ADM   +R Y  N+Q
Sbjct: 61  SARGVNVKGIVESDKPLQKEYNPDHPMADADGFIYKPNVNVMEEMADMISASRSYQMNVQ 120

Query: 117 TIKQSHDMMTTTLDLLR 133
               +  M+  TL + +
Sbjct: 121 VADTAKSMLMQTLRMGK 137


>gi|304310785|ref|YP_003810383.1| Flagellar basal-body rod protein FlgC [gamma proteobacterium HdN1]
 gi|301796518|emb|CBL44726.1| Flagellar basal-body rod protein FlgC [gamma proteobacterium HdN1]
          Length = 145

 Score =  109 bits (272), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 38/145 (26%), Positives = 62/145 (42%), Gaps = 13/145 (8%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM------ 55
             L +   IA SG++ Q+ R+   S NIANA +   +       R  +   +        
Sbjct: 1   MSLSSVFDIAGSGMSAQTVRLNTTSSNIANAESVASSVDKTYRARHPVFMAQYTAALGNR 60

Query: 56  -------HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                    + GV V  I   Q+     ++P HP A+  G V YPNVNV+ E  +M   +
Sbjct: 61  PTDPLTGKANAGVDVVGIVESQAPLQLRYEPDHPYADEKGYVAYPNVNVVEEMTNMISAS 120

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R +  N   +  +  M++  L+L +
Sbjct: 121 RSFQTNADVMNSAKQMLSAVLNLGQ 145


>gi|89069822|ref|ZP_01157157.1| flagellar basal-body rod protein FlgC [Oceanicola granulosus
           HTCC2516]
 gi|89044623|gb|EAR50739.1| flagellar basal-body rod protein FlgC [Oceanicola granulosus
           HTCC2516]
          Length = 128

 Score =  109 bits (272), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 51/133 (38%), Positives = 71/133 (53%), Gaps = 6/133 (4%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M     +  +  SGL  QSAR++ +SENIAN+ T G        R+     +     +G 
Sbjct: 1   MSDFSQALDVVASGLRAQSARLRHVSENIANSDTPG------YRRKTVTFRDAFGATAGE 54

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V V  + +D S     FDP HP+A+ SG  +  NV++L+E AD RE  R Y ANL+  +Q
Sbjct: 55  VAVGPVRLDDSALERIFDPAHPLADESGHFEGSNVDLLIEIADAREAQRSYEANLKMFEQ 114

Query: 121 SHDMMTTTLDLLR 133
              M T+ LDLLR
Sbjct: 115 VRQMSTSLLDLLR 127


>gi|114330359|ref|YP_746581.1| flagellar basal-body rod protein FlgC [Nitrosomonas eutropha C91]
 gi|114307373|gb|ABI58616.1| flagellar basal-body rod protein FlgC [Nitrosomonas eutropha C91]
          Length = 134

 Score =  109 bits (271), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 37/134 (27%), Positives = 66/134 (49%), Gaps = 2/134 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE--VMHGSG 59
             L +  ++A S +A QS R+ +++ N+ANA +   + G     R+ +          + 
Sbjct: 1   MSLFSVFNVAGSAMAAQSQRLNVVASNLANADSATSSTGEAYRSRQVVFRTVDISADKAK 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GV+V  I  D S     +DP HP+A+  G V  PNVNV+ E  +M   +R Y  ++  + 
Sbjct: 61  GVKVAGIVHDPSPMRVVYDPKHPMADEKGYVTLPNVNVVDEMVNMMSASRSYQNSVDMMN 120

Query: 120 QSHDMMTTTLDLLR 133
            +  ++  TL + +
Sbjct: 121 VTKTLLQKTLSIGQ 134


>gi|285018211|ref|YP_003375922.1| flagellar basal body rod protein [Xanthomonas albilineans GPE PC73]
 gi|283473429|emb|CBA15934.1| probable flagellar basal body rod protein [Xanthomonas albilineans]
          Length = 135

 Score =  109 bits (271), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 34/136 (25%), Positives = 66/136 (48%), Gaps = 4/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG- 59
           M  L     +A S L  QS RM  I+ N+ANA +   +  +     + I           
Sbjct: 1   MSNL-PIFDVAGSALQAQSVRMSTIASNLANADSVAGSAEAAYKPIEPIFQAVRDPHDSA 59

Query: 60  --GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
             GV VK+I   +   ++ ++PGHP+A+A G +  P+++ + +  ++   +R Y A ++ 
Sbjct: 60  LTGVNVKEISQSKDPPIKRYEPGHPLADADGYIYSPDIDPVSQMVNLISASRNYQAGVEV 119

Query: 118 IKQSHDMMTTTLDLLR 133
           +  + ++  +TL + R
Sbjct: 120 LNTAKELALSTLTIGR 135


>gi|120598230|ref|YP_962804.1| flagellar basal body rod protein FlgC [Shewanella sp. W3-18-1]
 gi|146293692|ref|YP_001184116.1| flagellar basal body rod protein FlgC [Shewanella putrefaciens
           CN-32]
 gi|120558323|gb|ABM24250.1| flagellar basal-body rod protein FlgC [Shewanella sp. W3-18-1]
 gi|145565382|gb|ABP76317.1| flagellar basal-body rod protein FlgC [Shewanella putrefaciens
           CN-32]
 gi|319427091|gb|ADV55165.1| flagellar basal-body rod protein FlgC [Shewanella putrefaciens 200]
          Length = 138

 Score =  109 bits (271), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 43/138 (31%), Positives = 67/138 (48%), Gaps = 6/138 (4%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV------M 55
             L +   +A SG++ QS R+   + NIANA +   +       R  I   E+       
Sbjct: 1   MSLFSIFDVAGSGMSAQSVRLNTTASNIANADSVSSSIDKTYRSRHPIFEAEMAKAQSQQ 60

Query: 56  HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
             S GV V+ I       ++E+ P HP+A+A G +  PNVNV+ E ADM   +R Y  N+
Sbjct: 61  QTSQGVTVRGIVESDKPLLKEYSPDHPMADADGFIYKPNVNVMEEMADMISASRSYQMNV 120

Query: 116 QTIKQSHDMMTTTLDLLR 133
           Q  + +  M+  TL + +
Sbjct: 121 QVAEAAKSMLQQTLGMGK 138


>gi|167034946|ref|YP_001670177.1| flagellar basal body rod protein FlgC [Pseudomonas putida GB-1]
 gi|166861434|gb|ABY99841.1| flagellar basal-body rod protein FlgC [Pseudomonas putida GB-1]
          Length = 147

 Score =  109 bits (271), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 46/147 (31%), Positives = 67/147 (45%), Gaps = 15/147 (10%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG- 60
             L +  +IA SG++ Q+ R+  ++ NIANA T   +       R  +      +   G 
Sbjct: 1   MSLSSVFNIAGSGMSAQNTRLNTVASNIANAETVSSSIDQTYRARHPVFATTFQNAQAGG 60

Query: 61  --------------VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
                         V+VK I  DQST    ++P HP AN  G V YPNVNV+ E ADM  
Sbjct: 61  SQSLFEDQGEAGQGVQVKGIVEDQSTLEARYEPNHPAANKDGYVYYPNVNVVEEMADMIS 120

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
            +R +  N + +  +  MM   L L +
Sbjct: 121 ASRAFQTNAELMNTAKSMMQKVLTLGQ 147


>gi|319787123|ref|YP_004146598.1| flagellar basal-body rod protein FlgC [Pseudoxanthomonas suwonensis
           11-1]
 gi|317465635|gb|ADV27367.1| flagellar basal-body rod protein FlgC [Pseudoxanthomonas suwonensis
           11-1]
          Length = 135

 Score =  109 bits (271), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 38/136 (27%), Positives = 66/136 (48%), Gaps = 4/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-- 58
           M  L     +A S L  QS R+  I+ N+ANA     +P +     + +   +       
Sbjct: 1   MSNL-PIFDVAGSALQAQSVRLSTIASNLANADAVAGSPEAVYKPLEPVFQAQASGSDPA 59

Query: 59  -GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
             GVRV++I    +  V  ++PGHP+A+A G V  P+V+ + +  +M   +R Y A ++ 
Sbjct: 60  LTGVRVREIAQSDAPPVRRYEPGHPLADADGYVFAPDVDPVSQMVNMISASRSYQAGVEI 119

Query: 118 IKQSHDMMTTTLDLLR 133
           I  + ++   TL + R
Sbjct: 120 INTAKELAIATLSMGR 135


>gi|90423029|ref|YP_531399.1| flagellar basal body rod protein FlgC [Rhodopseudomonas palustris
           BisB18]
 gi|90105043|gb|ABD87080.1| flagellar basal-body rod protein FlgC [Rhodopseudomonas palustris
           BisB18]
          Length = 141

 Score =  108 bits (270), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 64/135 (47%), Positives = 84/135 (62%), Gaps = 3/135 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
                S  IA SGL  Q+ARM++ISENIANA +T  TPG DPYRRK  +F   +  +   
Sbjct: 6   MDFSRSMGIATSGLRAQAARMRVISENIANAESTAQTPGGDPYRRKVPTFTSALDRALDA 65

Query: 62  RVK---KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
           RV    ++  D S F  +++PG+P A+A+G VKYPNVN LVE  DMR+  R Y ANL  I
Sbjct: 66  RVVTLGRVKPDNSNFRVKYEPGNPAADAAGNVKYPNVNPLVEMTDMRDAQRSYEANLNII 125

Query: 119 KQSHDMMTTTLDLLR 133
             +  M+  TLD+L+
Sbjct: 126 SATRRMIQRTLDILK 140


>gi|127512277|ref|YP_001093474.1| flagellar basal body rod protein FlgC [Shewanella loihica PV-4]
 gi|126637572|gb|ABO23215.1| flagellar basal-body rod protein FlgC [Shewanella loihica PV-4]
          Length = 139

 Score =  108 bits (270), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 40/139 (28%), Positives = 64/139 (46%), Gaps = 6/139 (4%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV------M 55
             L    ++A SG++ QS R+   + NIANA +   +       R  +   E+       
Sbjct: 1   MSLFNIFNVAGSGMSAQSVRLNTTASNIANADSVSSSVDKTYRARHPVFEAELAKASHQQ 60

Query: 56  HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
           + S  V+V  I        +E+ P HP+A+A G +  PNVNV+ E A+M   +R Y  N+
Sbjct: 61  NTSQAVKVAGIVESDKPLQKEYSPDHPLADADGFIYKPNVNVMEEMANMISASRSYQMNV 120

Query: 116 QTIKQSHDMMTTTLDLLRD 134
           Q    +  M+  TL +   
Sbjct: 121 QVADAAKSMLQQTLRIGNS 139


>gi|114762160|ref|ZP_01441628.1| flagellar basal-body rod protein FlgC [Pelagibaca bermudensis
           HTCC2601]
 gi|114545184|gb|EAU48187.1| flagellar basal-body rod protein FlgC [Roseovarius sp. HTCC2601]
          Length = 130

 Score =  108 bits (270), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 45/133 (33%), Positives = 72/133 (54%), Gaps = 5/133 (3%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M     +  +++SGL  Q+ R++++SENIAN  T G    + P+     S       +G 
Sbjct: 1   MSAFSDALSVSSSGLRAQADRLRVVSENIANVDTPGYRRKTLPFELGEGSDGVREVQAGD 60

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
            R+     D+S     +DP HP+A+ +G     NV+++VE AD RE  R Y ANL+  +Q
Sbjct: 61  TRL-----DRSDLERIWDPHHPLADPAGFYDGTNVDLIVELADAREAQRSYEANLKMFEQ 115

Query: 121 SHDMMTTTLDLLR 133
           +  M ++ +DLLR
Sbjct: 116 TRQMSSSLMDLLR 128


>gi|302338075|ref|YP_003803281.1| flagellar basal-body rod protein FlgC [Spirochaeta smaragdinae DSM
           11293]
 gi|301635260|gb|ADK80687.1| flagellar basal-body rod protein FlgC [Spirochaeta smaragdinae DSM
           11293]
          Length = 152

 Score =  108 bits (270), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 47/152 (30%), Positives = 70/152 (46%), Gaps = 20/152 (13%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPG--------------SDPYRRK 47
             L +S ++A +G++ Q  R+ ++S+NIANA T     G              S PY R 
Sbjct: 1   MGLFSSINVAATGMSAQRLRLDVVSDNIANASTARTPEGGPFRRSRVIFRARNSQPYWRS 60

Query: 48  TISFEEVMHGSG-GVRVKKIGVD-QSTFVEEFDPGHPVA----NASGIVKYPNVNVLVET 101
                 + +G G GVRV  +  D  +     +DP HP A       G V+ PNVN++ E 
Sbjct: 61  PFLPTALDNGVGRGVRVASVQKDMDAKPKLVYDPTHPDAIQTGPKKGYVEMPNVNIVEEM 120

Query: 102 ADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            DM   +R Y AN+  +  S  M    L++ R
Sbjct: 121 VDMMSASRSYEANVAVVNGSKAMFMRALEIGR 152


>gi|302874587|ref|YP_003843220.1| flagellar basal-body rod protein FlgC [Clostridium cellulovorans
           743B]
 gi|307690802|ref|ZP_07633248.1| flagellar basal body rod protein FlgC [Clostridium cellulovorans
           743B]
 gi|302577444|gb|ADL51456.1| flagellar basal-body rod protein FlgC [Clostridium cellulovorans
           743B]
          Length = 143

 Score =  108 bits (270), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 51/144 (35%), Positives = 73/144 (50%), Gaps = 13/144 (9%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH----- 56
             +  S  I++SGL+ +  RM I+S NIAN  TT    G  PY+RK   F+E +      
Sbjct: 1   MGVFDSMRISSSGLSAERLRMDIVSSNIANVNTTRTEDG-GPYKRKIGMFQENVDKYLDS 59

Query: 57  -------GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNR 109
                   S GV+  KI  D+S     +DP HP A+  G V  PN+N+L E AD+  ++R
Sbjct: 60  TTGKYESRSLGVKATKIVEDESALKRSYDPSHPDADEQGYVTMPNINILNEMADLIASSR 119

Query: 110 LYMANLQTIKQSHDMMTTTLDLLR 133
            Y AN+  I     + T  L++ R
Sbjct: 120 AYEANVTAITAQKGIFTKALEIGR 143


>gi|170725953|ref|YP_001759979.1| flagellar basal body rod protein FlgC [Shewanella woodyi ATCC
           51908]
 gi|169811300|gb|ACA85884.1| flagellar basal-body rod protein FlgC [Shewanella woodyi ATCC
           51908]
          Length = 139

 Score =  108 bits (270), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 41/139 (29%), Positives = 66/139 (47%), Gaps = 6/139 (4%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M  L    +++ SG++ QS R+   + NIANA +   +       R  I   E+   S  
Sbjct: 1   MMSLFNIFNVSGSGMSAQSVRLNTTASNIANADSVSSSIDETYRARHPIFEAEMAKASHQ 60

Query: 61  VR------VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
            +      VK I    +   +E+ P HP+A+  G +  PNVNV+ E ADM   +R Y  N
Sbjct: 61  QQSSQSVAVKGIVESDAPLQKEYSPNHPMADTDGFIYKPNVNVMEEMADMISASRSYQMN 120

Query: 115 LQTIKQSHDMMTTTLDLLR 133
           +Q  + +  M+  TL + +
Sbjct: 121 VQVAEAAKSMLQQTLRIGK 139


>gi|312879581|ref|ZP_07739381.1| flagellar basal-body rod protein FlgC [Aminomonas paucivorans DSM
           12260]
 gi|310782872|gb|EFQ23270.1| flagellar basal-body rod protein FlgC [Aminomonas paucivorans DSM
           12260]
          Length = 139

 Score =  108 bits (270), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 46/136 (33%), Positives = 66/136 (48%), Gaps = 6/136 (4%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH------GS 58
             +  +A S L      M  +S N+AN  TT    G    R+  I  E++M        S
Sbjct: 4   FRNIDVAGSALTAHRLWMDTVSSNLANVNTTRTPSGGPYVRKVPIFQEKLMEAMKGAPSS 63

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
            GVRV +I  D       + P HP ANA G V YPNVNV+ E ADM   +R Y A++  +
Sbjct: 64  SGVRVAEIAKDPLPPRMVYQPDHPDANAEGYVAYPNVNVVREMADMLVASRAYEASVNVV 123

Query: 119 KQSHDMMTTTLDLLRD 134
           +    + T+ L+++R 
Sbjct: 124 ETGKALWTSALEIMRS 139


>gi|86157822|ref|YP_464607.1| flagellar basal-body rod protein FlgC [Anaeromyxobacter
           dehalogenans 2CP-C]
 gi|220917656|ref|YP_002492960.1| flagellar basal-body rod protein FlgC [Anaeromyxobacter
           dehalogenans 2CP-1]
 gi|85774333|gb|ABC81170.1| flagellar basal-body rod protein FlgC [Anaeromyxobacter
           dehalogenans 2CP-C]
 gi|219955510|gb|ACL65894.1| flagellar basal-body rod protein FlgC [Anaeromyxobacter
           dehalogenans 2CP-1]
          Length = 140

 Score =  108 bits (270), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 38/141 (26%), Positives = 60/141 (42%), Gaps = 9/141 (6%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-- 58
           MD+L ++ +++ SGLA +  R+ + + N+ANA TT    G    R   +        +  
Sbjct: 1   MDFL-SALNVSASGLAAERVRVNLAASNLANAETTRGPDGQPYRRLDPVLEAVPFDAALG 59

Query: 59  ------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
                  GVRV  I          F P HP A+  G V  P+VN + E  ++    + Y 
Sbjct: 60  AAGPAPSGVRVAAIAEGDGPGRRVFSPAHPDADPDGFVTLPDVNPVHEIVNLMSAQKAYE 119

Query: 113 ANLQTIKQSHDMMTTTLDLLR 133
           AN   +     M    L++ R
Sbjct: 120 ANATAVDTLKTMAQRALEIAR 140


>gi|89098646|ref|ZP_01171528.1| flagellar basal-body rod protein C [Bacillus sp. NRRL B-14911]
 gi|89086608|gb|EAR65727.1| flagellar basal-body rod protein C [Bacillus sp. NRRL B-14911]
          Length = 149

 Score =  108 bits (270), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 46/149 (30%), Positives = 65/149 (43%), Gaps = 17/149 (11%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGD---TPGSDPYRRKTISFEEVMHG- 57
             +  S +  +S L  Q  RM +IS N+AN  +T          PY RK +  +      
Sbjct: 1   MSMFHSMNTTSSALTAQRLRMDVISSNMANVDSTRGKLVNGEWQPYTRKEVVMQPQEKNF 60

Query: 58  -------------SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
                          GVRV +I  DQ+ F   +DP HP AN +G V+ PNV+ L E  D+
Sbjct: 61  SSFLNTAMNAGSAGSGVRVSEIREDQTPFKLVYDPSHPDANEAGYVQMPNVDPLREMVDL 120

Query: 105 RETNRLYMANLQTIKQSHDMMTTTLDLLR 133
               R Y AN+     S  MM   L++ +
Sbjct: 121 ISATRSYEANVTVFNASKSMMMKALEIGK 149


>gi|163852027|ref|YP_001640070.1| flagellar basal body rod protein FlgC [Methylobacterium extorquens
           PA1]
 gi|218530781|ref|YP_002421597.1| flagellar basal body rod protein FlgC [Methylobacterium
           chloromethanicum CM4]
 gi|240139294|ref|YP_002963769.1| flagellar basal-body rod protein flgC [Methylobacterium extorquens
           AM1]
 gi|254561750|ref|YP_003068845.1| flagellar basal-body rod protein flgC [Methylobacterium extorquens
           DM4]
 gi|163663632|gb|ABY30999.1| flagellar basal-body rod protein FlgC [Methylobacterium extorquens
           PA1]
 gi|218523084|gb|ACK83669.1| flagellar basal-body rod protein FlgC [Methylobacterium
           chloromethanicum CM4]
 gi|240009266|gb|ACS40492.1| flagellar basal-body rod protein flgC [Methylobacterium extorquens
           AM1]
 gi|254269028|emb|CAX24989.1| flagellar basal-body rod protein flgC [Methylobacterium extorquens
           DM4]
          Length = 136

 Score =  108 bits (270), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 61/136 (44%), Positives = 81/136 (59%), Gaps = 4/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD+L  S  IA SGL  QS RM+II+ENIANA +T  T G DPYRRK  +F         
Sbjct: 1   MDFL-KSLGIAASGLKAQSGRMRIIAENIANADSTAQTAGGDPYRRKIPTFTSRFDNELN 59

Query: 61  VRVK---KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
             V    ++  D + F  + DPG+P A+A G V+ PNVN L+E  DMRE  R Y ANL  
Sbjct: 60  ASVVEAGRVRRDPTPFRTKHDPGNPAADARGEVRLPNVNGLIENMDMREAQRSYEANLNM 119

Query: 118 IKQSHDMMTTTLDLLR 133
           +  +  M++ TL++L+
Sbjct: 120 VTATRRMISRTLEILK 135


>gi|229544391|ref|ZP_04433449.1| flagellar basal-body rod protein FlgC [Bacillus coagulans 36D1]
 gi|229324876|gb|EEN90553.1| flagellar basal-body rod protein FlgC [Bacillus coagulans 36D1]
          Length = 149

 Score =  108 bits (270), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 50/149 (33%), Positives = 71/149 (47%), Gaps = 17/149 (11%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDT---PGSDPYRRKTISFEE----- 53
             +    +I++  L+ Q  RM +IS NIANA TT DT       PYRRK +         
Sbjct: 1   MSMFTGMNISSEALSAQRLRMDVISSNIANADTTRDTYVNGKWQPYRRKEVVLAAGGGSF 60

Query: 54  ---------VMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
                    +     GV+V  I  D S F +E++P  P A+A+G V  PNV++L E   M
Sbjct: 61  ASIFRSKLGMQGAGSGVQVAGIVEDNSDFKKEYNPDDPDADANGYVTKPNVDLLTEMTGM 120

Query: 105 RETNRLYMANLQTIKQSHDMMTTTLDLLR 133
               R Y AN+  +  S  M+  TL+L +
Sbjct: 121 ISATRSYEANVTALNASKAMLMKTLELGQ 149


>gi|118444436|ref|YP_877973.1| flagellar basal body rod protein FlgC [Clostridium novyi NT]
 gi|118134892|gb|ABK61936.1| flagellar basal-body rod protein FlgC [Clostridium novyi NT]
          Length = 145

 Score =  108 bits (270), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 51/145 (35%), Positives = 68/145 (46%), Gaps = 13/145 (8%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGS-DPYRRKTISFEEVMHGS-- 58
               +S  I+ SGLA +  RM  IS NI N +TT    G   PY RK   F+E +     
Sbjct: 1   MNAFSSMRISASGLAAERLRMDTISSNITNFKTTRGKDGQRQPYIRKIAVFKENLKKELN 60

Query: 59  ----------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                      GV+   I  D+S     ++P HP A+ +G V  PNVN+L E ADM    
Sbjct: 61  KSGKGYESRLNGVKAVGIVEDKSPLRRVYNPNHPDADENGYVLMPNVNILNEMADMIAAT 120

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R Y AN+  I  S +M    L++ R
Sbjct: 121 RAYEANVTAINSSKNMFMKALEIGR 145


>gi|188534172|ref|YP_001907969.1| flagellar basal body rod protein FlgC [Erwinia tasmaniensis Et1/99]
 gi|188029214|emb|CAO97086.1| Cell-proximal portion of basal-body rod [Erwinia tasmaniensis
           Et1/99]
          Length = 134

 Score =  108 bits (270), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 42/134 (31%), Positives = 70/134 (52%), Gaps = 2/134 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--G 59
             L+    IA S +A QS R+ + + N+ANA +     G     ++ +       GS  G
Sbjct: 1   MALLNIFDIAGSAMAAQSQRLNVSASNLANADSVTGPDGQPYVAKQVVFQTNAAPGSAAG 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GV+V ++  D +     ++PG+P+A+A G VK PNV+V+ ET +    +R Y AN++ + 
Sbjct: 61  GVKVAEVIDDPAPARLVYEPGNPMADAKGYVKMPNVDVVAETVNTLSASRSYQANVEVLN 120

Query: 120 QSHDMMTTTLDLLR 133
               MM  TL + +
Sbjct: 121 TVKQMMMKTLTMGQ 134


>gi|134300249|ref|YP_001113745.1| flagellar basal-body rod protein FlgC [Desulfotomaculum reducens
           MI-1]
 gi|134052949|gb|ABO50920.1| flagellar basal-body rod protein FlgC [Desulfotomaculum reducens
           MI-1]
          Length = 145

 Score =  108 bits (270), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 48/144 (33%), Positives = 68/144 (47%), Gaps = 12/144 (8%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTG--DTPGSDPYRRKTISFEEVMHG-- 57
             L  S  I+ SG+  +  R+ +IS NIAN  T    + P S  YRR+   F E +    
Sbjct: 1   MGLFDSFGISASGMTSERLRLDLISNNIANMNTPSRPNDPNSPVYRRRVPIFAEQLRQTI 60

Query: 58  --------SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNR 109
                     GVRVK I  D +      DP HP+A+  G V YPN+N++ E  DM   +R
Sbjct: 61  STKGVEPKGAGVRVKAITEDPAPPRIVNDPSHPLADDKGNVAYPNINIVNEMVDMITASR 120

Query: 110 LYMANLQTIKQSHDMMTTTLDLLR 133
            Y AN+  +  +  M    L++ R
Sbjct: 121 TYEANVTALNAAKSMALKALEISR 144


>gi|92116946|ref|YP_576675.1| flagellar basal body rod protein FlgC [Nitrobacter hamburgensis
           X14]
 gi|91799840|gb|ABE62215.1| flagellar basal-body rod protein FlgC [Nitrobacter hamburgensis
           X14]
          Length = 141

 Score =  108 bits (270), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 62/135 (45%), Positives = 82/135 (60%), Gaps = 3/135 (2%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
             + S  IA SGL  Q+ RM++ISENIANA +T   PG DPYRRK  +F   +  +   +
Sbjct: 7   DFMRSMSIATSGLRAQAGRMRVISENIANADSTAQVPGGDPYRRKVPTFSSALDRALDAK 66

Query: 63  VK---KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           V    ++  D STF  + +P +P A+ASG VKYPNVN LVE  DMR+  R Y ANL  I 
Sbjct: 67  VVSLGRVKPDMSTFRIKHEPSNPAADASGNVKYPNVNSLVEMTDMRDAQRSYEANLNIIS 126

Query: 120 QSHDMMTTTLDLLRD 134
            +  M+  TLD+L+ 
Sbjct: 127 ATRRMIQRTLDILKS 141


>gi|77464908|ref|YP_354412.1| flagellar basal body rod protein FlgC [Rhodobacter sphaeroides
           2.4.1]
 gi|221640829|ref|YP_002527091.1| flagellar basal body rod protein FlgC [Rhodobacter sphaeroides
           KD131]
 gi|77389326|gb|ABA80511.1| putative flagellar basal-body rod protein FlgC [Rhodobacter
           sphaeroides 2.4.1]
 gi|221161610|gb|ACM02590.1| flagellar basal-body rod protein FlgC [Rhodobacter sphaeroides
           KD131]
          Length = 128

 Score =  108 bits (269), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 54/133 (40%), Positives = 76/133 (57%), Gaps = 8/133 (6%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M  L+ S  ++ SG+  Q+ R++ +SENIANA T G       Y RKT+SF+E    SG 
Sbjct: 3   MTDLLQSLGLSASGMRSQALRLRHVSENIANADTPG-------YHRKTVSFQEDPD-SGL 54

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V    + +D+S   + + PGHP+A   G     NV+++VE AD RE  R Y ANL+   Q
Sbjct: 55  VSTGPVRLDRSELQKIYAPGHPLAGEDGYYDGSNVDLVVEIADAREAQRSYEANLRMFDQ 114

Query: 121 SHDMMTTTLDLLR 133
           +  M  + LDLLR
Sbjct: 115 ARQMTQSLLDLLR 127


>gi|170741834|ref|YP_001770489.1| flagellar basal body rod protein FlgC [Methylobacterium sp. 4-46]
 gi|168196108|gb|ACA18055.1| flagellar basal-body rod protein FlgC [Methylobacterium sp. 4-46]
          Length = 138

 Score =  108 bits (269), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 70/137 (51%), Positives = 101/137 (73%), Gaps = 3/137 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           +D L ASA +A++G+ VQS R+++++ENIANA++TG  PGSDPY+RKTI+F   +  + G
Sbjct: 2   IDPLTASARLASAGMEVQSLRLRVVAENIANAQSTGVDPGSDPYQRKTITFRSELDRAAG 61

Query: 61  V---RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
                V++IGVD++ F  E +PG+P A+ +G VKYPNVNVL+E  DMRE NR Y ANLQ 
Sbjct: 62  AATVGVREIGVDRAPFRVEHEPGNPAADENGDVKYPNVNVLIEMTDMREANRSYEANLQM 121

Query: 118 IKQSHDMMTTTLDLLRD 134
           IKQ+  ++ + +DLL+ 
Sbjct: 122 IKQARALVASVIDLLKS 138


>gi|15606427|ref|NP_213807.1| flagellar biosynthesis FlgC [Aquifex aeolicus VF5]
 gi|6225342|sp|O67243|FLGC_AQUAE RecName: Full=Flagellar basal-body rod protein flgC
 gi|2983627|gb|AAC07195.1| flagellar biosynthesis FlgC [Aquifex aeolicus VF5]
          Length = 134

 Score =  108 bits (269), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 34/133 (25%), Positives = 56/133 (42%), Gaps = 5/133 (3%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M  +  +  I+ SG+  Q  RM  ++ N+AN  +        P+ R    FE V +    
Sbjct: 1   MMDIFNALDISASGMYAQRIRMNTVASNLANYESFKS--DGTPFNRLVPVFEAVENLEDP 58

Query: 61  VRVKKIGVDQST---FVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
             V     +      F   +DP +P A+  G V+ PN+  + E  DM    R Y ANL+ 
Sbjct: 59  SEVYVNVREIREVPGFKLIYDPENPNADERGYVRLPNIEPVKEMVDMITAVRSYEANLKA 118

Query: 118 IKQSHDMMTTTLD 130
              + ++   T +
Sbjct: 119 FSLTKEIFERTFE 131


>gi|316932834|ref|YP_004107816.1| flagellar basal-body rod protein FlgC [Rhodopseudomonas palustris
           DX-1]
 gi|315600548|gb|ADU43083.1| flagellar basal-body rod protein FlgC [Rhodopseudomonas palustris
           DX-1]
          Length = 141

 Score =  108 bits (269), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 60/135 (44%), Positives = 81/135 (60%), Gaps = 3/135 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
                S  IA SGL  Q+ RM++ISENIANA +T  T G DPYRRK  +F   +  S   
Sbjct: 6   MDFSRSMAIATSGLRAQAGRMRVISENIANADSTAQTAGGDPYRRKVPTFTSALDRSLDA 65

Query: 62  RVK---KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
           RV    ++  D S F  +++P +P A+A+G VKYPNVN ++E  DMR+  R Y ANL  I
Sbjct: 66  RVVALGRVKPDTSAFRVKYEPTNPAADANGNVKYPNVNPVIEMTDMRDAQRSYEANLNVI 125

Query: 119 KQSHDMMTTTLDLLR 133
             +  M+  TLD+L+
Sbjct: 126 SATRRMIQRTLDILK 140


>gi|197122865|ref|YP_002134816.1| flagellar basal-body rod protein FlgC [Anaeromyxobacter sp. K]
 gi|196172714|gb|ACG73687.1| flagellar basal-body rod protein FlgC [Anaeromyxobacter sp. K]
          Length = 140

 Score =  108 bits (269), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 38/141 (26%), Positives = 61/141 (43%), Gaps = 9/141 (6%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-- 58
           MD+L ++ +++ SGLA +  R+ + + N+ANA TT    G    R   +        +  
Sbjct: 1   MDFL-SALNVSASGLAAERVRVNLAASNLANAETTRGPDGQPYRRLDPVLEAVPFDAALG 59

Query: 59  ------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
                  GVRV  I   +      F P HP A+  G V  P+VN + E  ++    + Y 
Sbjct: 60  AAGPAPSGVRVAAIAEGEGPGRRVFSPAHPDADPDGFVTLPDVNPVHEIVNLMSAQKAYE 119

Query: 113 ANLQTIKQSHDMMTTTLDLLR 133
           AN   +     M    L++ R
Sbjct: 120 ANATAVDTLKTMAQRALEIAR 140


>gi|253996321|ref|YP_003048385.1| flagellar basal-body rod protein FlgC [Methylotenera mobilis JLW8]
 gi|253983000|gb|ACT47858.1| flagellar basal-body rod protein FlgC [Methylotenera mobilis JLW8]
          Length = 135

 Score =  108 bits (269), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 38/134 (28%), Positives = 66/134 (49%), Gaps = 2/134 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS--FEEVMHGSG 59
             L    +I+ S ++ Q+ R+  ++ N+ANA +     G+    ++ +            
Sbjct: 1   MSLFNVFNISGSAMSAQAQRLNTVASNLANADSATSANGTPYKSKQVVFSAMPSKSPDVS 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GV+V K+  D+S     +DP HP+AN  G V  PNVNV  E  +M   +R Y  N++T+ 
Sbjct: 61  GVKVTKVVEDKSAPRMIYDPKHPLANDKGYVSMPNVNVTEEMVNMISASRAYQNNVETMN 120

Query: 120 QSHDMMTTTLDLLR 133
            +  M+  TL + +
Sbjct: 121 ATKTMLMKTLTIGQ 134


>gi|16125206|ref|NP_419770.1| flagellar basal body rod protein FlgC [Caulobacter crescentus CB15]
 gi|221233942|ref|YP_002516378.1| flagellar basal body rod protein FlgC [Caulobacter crescentus
           NA1000]
 gi|13422230|gb|AAK22938.1| flagellar basal-body rod protein FlgC [Caulobacter crescentus CB15]
 gi|220963114|gb|ACL94470.1| flagellar basal-body rod protein flgC [Caulobacter crescentus
           NA1000]
          Length = 139

 Score =  108 bits (269), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 59/130 (45%), Positives = 85/130 (65%), Gaps = 1/130 (0%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRK-TISFEEVMHGSGGVRV 63
           +A+  +A+S L  Q  RM++I+ENIANA +T  T G DPYRR+  +     + G  GV++
Sbjct: 9   LATMAVASSALRAQQGRMRVIAENIANAHSTARTAGGDPYRRQVPVFKPTTVQGGEGVQM 68

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
            ++  DQS F  E+DPG+P A+A G VK PNVN +VE+ DM+E  R Y ANL  I+ +  
Sbjct: 69  LRVDPDQSAFKTEYDPGNPAADAKGYVKLPNVNTMVESLDMKEAQRAYEANLNVIETARS 128

Query: 124 MMTTTLDLLR 133
           M + TLD+L+
Sbjct: 129 MQSRTLDILK 138


>gi|229592132|ref|YP_002874251.1| flagellar basal body rod protein FlgC [Pseudomonas fluorescens
           SBW25]
 gi|229363998|emb|CAY51548.1| putative flagellar basal-body rod protein [Pseudomonas fluorescens
           SBW25]
          Length = 147

 Score =  108 bits (269), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 44/147 (29%), Positives = 65/147 (44%), Gaps = 15/147 (10%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG- 60
             L +  +IA SG++ Q+ R+  ++ NIANA T   +       R  +       G  G 
Sbjct: 1   MSLSSVFNIAGSGMSAQTTRLNTVASNIANAETVSSSIDQTYRARHPVFATMFQGGQSGG 60

Query: 61  --------------VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
                         V+V  +  DQS     ++P HP AN  G V YPNVNV+ E ADM  
Sbjct: 61  SDSLFQDQGAAGSGVQVLGVVEDQSNLEARYEPNHPAANEKGYVYYPNVNVVEEMADMIS 120

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
            +R +  N + +  +  MM   L L +
Sbjct: 121 ASRSFQTNAEMMNTAKTMMQKVLTLGQ 147


>gi|134095099|ref|YP_001100174.1| basal-body rod protein [Herminiimonas arsenicoxydans]
 gi|133739002|emb|CAL62050.1| Flagellar basal-body rod protein FlgC (Putative proximal rod
           protein) [Herminiimonas arsenicoxydans]
          Length = 134

 Score =  108 bits (269), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 43/134 (32%), Positives = 68/134 (50%), Gaps = 2/134 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF--EEVMHGSG 59
             L    ++A S ++ QS R+ ++S NIANA +T    G     ++            S 
Sbjct: 1   MSLFNIFNVAGSAMSAQSQRLNVVSSNIANAESTTSADGKTYRAKQVEFQSVPMAGATST 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GV+V+++  D S     FDP HP A+ +G V  PNVNV+ E  +M   +R Y  N++T+ 
Sbjct: 61  GVKVRQVVEDASPLKMVFDPKHPNADETGHVAMPNVNVVEEMVNMISASRSYQTNVETMN 120

Query: 120 QSHDMMTTTLDLLR 133
            +  M+  TL L +
Sbjct: 121 AAKTMLLKTLTLGQ 134


>gi|313895871|ref|ZP_07829425.1| flagellar basal-body rod protein FlgC [Selenomonas sp. oral taxon
           137 str. F0430]
 gi|312975296|gb|EFR40757.1| flagellar basal-body rod protein FlgC [Selenomonas sp. oral taxon
           137 str. F0430]
          Length = 151

 Score =  108 bits (269), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 51/148 (34%), Positives = 66/148 (44%), Gaps = 17/148 (11%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE--------- 52
             +      A SGL  +  RM +IS NIANA TT    G   +RR  +            
Sbjct: 1   MGMFLGIDAAASGLTAERLRMDVISNNIANANTTRAQGGGAYHRRYVVFQPREKGNGIGF 60

Query: 53  --------EVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
                   E M    GVR   I  D+S  V  ++PGHP ANA G V+ PNVN++ E  DM
Sbjct: 61  ESFLARASERMRPGDGVRALSIETDRSPGVLVYEPGHPDANAEGYVERPNVNIVSEMVDM 120

Query: 105 RETNRLYMANLQTIKQSHDMMTTTLDLL 132
              +R Y AN  TI  +  M+   L + 
Sbjct: 121 ISASRGYEANATTINAAKSMVNAALRIG 148


>gi|296534150|ref|ZP_06896646.1| flagellar basal-body rod protein FlgC [Roseomonas cervicalis ATCC
           49957]
 gi|296265526|gb|EFH11655.1| flagellar basal-body rod protein FlgC [Roseomonas cervicalis ATCC
           49957]
          Length = 136

 Score =  108 bits (269), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 57/135 (42%), Positives = 88/135 (65%), Gaps = 3/135 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             L  +  ++ SG++ QSAR+++++EN+AN  +TG+TPG++PYRRKT++F   +  + G 
Sbjct: 1   MDLERALSVSASGMSAQSARLRVVAENVANRDSTGETPGAEPYRRKTVTFANRLDRALGA 60

Query: 62  ---RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
              RV +IG     F E++DP HP A+A G V+ PNV+ +VE  DMRE  R Y ANL  +
Sbjct: 61  ETVRVARIGTAAGNFPEQYDPQHPAADARGYVRKPNVDSMVEMMDMREAQRSYSANLSVL 120

Query: 119 KQSHDMMTTTLDLLR 133
           + +  M+   +DLLR
Sbjct: 121 ETTRAMIQRAIDLLR 135


>gi|320529387|ref|ZP_08030475.1| flagellar basal-body rod protein FlgC [Selenomonas artemidis F0399]
 gi|320138353|gb|EFW30247.1| flagellar basal-body rod protein FlgC [Selenomonas artemidis F0399]
          Length = 151

 Score =  108 bits (269), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 51/148 (34%), Positives = 66/148 (44%), Gaps = 17/148 (11%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE--------- 52
             +      A SGL  +  RM +IS NIANA TT    G   +RR  +            
Sbjct: 1   MGMFLGIDAAASGLTAERLRMDVISNNIANANTTRAQGGGAYHRRYVVFQPREKGNGIGF 60

Query: 53  --------EVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
                   E M    GVR   I  D+S  V  ++PGHP ANA G V+ PNVN++ E  DM
Sbjct: 61  ESFLARASERMRPGDGVRALSIETDRSPGVLVYEPGHPDANAEGYVERPNVNIVSEMVDM 120

Query: 105 RETNRLYMANLQTIKQSHDMMTTTLDLL 132
              +R Y AN  TI  +  M+   L + 
Sbjct: 121 ISASRGYEANTTTINAAKSMVNAALRIG 148


>gi|168698712|ref|ZP_02730989.1| Flagellar basal body rod protein [Gemmata obscuriglobus UQM 2246]
          Length = 144

 Score =  108 bits (269), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 46/142 (32%), Positives = 71/142 (50%), Gaps = 10/142 (7%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
           + L A + I+ +G++ +  RM++I+ NIANA TT    G  PYRR+ + FEE++  + G 
Sbjct: 4   NDLFAGSAISGTGMSAERLRMEVIANNIANANTTRSANG-GPYRRQDVVFEELLGAAAGP 62

Query: 62  ---------RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
                       +   D +       PGHP A+A G V+ PNV + +E  ++    R Y 
Sbjct: 63  FGGPDLRGVVAVERVEDPTELPRVHQPGHPDADAEGFVRMPNVQLPIEMVNLLTATRAYE 122

Query: 113 ANLQTIKQSHDMMTTTLDLLRD 134
           ANL+  +    M    L LLR 
Sbjct: 123 ANLRAAQTFRQMNEQALVLLRS 144


>gi|157376218|ref|YP_001474818.1| flagellar basal body rod protein FlgC [Shewanella sediminis
           HAW-EB3]
 gi|157318592|gb|ABV37690.1| flagellar basal-body rod protein FlgC [Shewanella sediminis
           HAW-EB3]
          Length = 138

 Score =  108 bits (269), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 41/138 (29%), Positives = 64/138 (46%), Gaps = 6/138 (4%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV------M 55
             L    ++A SG++ QS R+   + NIANA     +       R  I   E+       
Sbjct: 1   MSLFDIFNVAGSGMSAQSVRLNTTASNIANADAVSSSVDETYRARHPIFEAEMAKASHQQ 60

Query: 56  HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
             S  V VK I    +   +E+ P HP+A+  G +  PNVNV+ E A+M   +R Y  N+
Sbjct: 61  QSSQAVAVKGIVESDAPLQKEYSPDHPMADGDGFIYKPNVNVMEEMANMISASRSYQMNV 120

Query: 116 QTIKQSHDMMTTTLDLLR 133
           Q  + +  M+  TL + +
Sbjct: 121 QVAEAAKSMLQQTLRIGK 138


>gi|284007175|emb|CBA72461.1| flagellar basal body rod protein FlgC [Arsenophonus nasoniae]
          Length = 135

 Score =  108 bits (269), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 40/135 (29%), Positives = 70/135 (51%), Gaps = 2/135 (1%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM--HGS 58
           M  L +   I++S L+ QS R+ + + N+ANA +     G     ++ +     +  +G 
Sbjct: 1   MMSLFSIFEISSSALSAQSQRLNVSASNMANADSVTGPNGEPYRAKQVVFSVSELSANGI 60

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
           GGV V ++  D S F  E+ P HP+A+  G ++ PNV+V  E  +    +R Y AN++ +
Sbjct: 61  GGVSVAQVVDDPSPFRLEYQPAHPLADQRGYIRKPNVDVTAEMINPISASRSYQANIEVM 120

Query: 119 KQSHDMMTTTLDLLR 133
             +  +M  TL L +
Sbjct: 121 NTTKSLMQKTLTLGQ 135


>gi|148546704|ref|YP_001266806.1| flagellar basal body rod protein FlgC [Pseudomonas putida F1]
 gi|148510762|gb|ABQ77622.1| flagellar basal-body rod protein FlgC [Pseudomonas putida F1]
          Length = 147

 Score =  108 bits (268), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 45/147 (30%), Positives = 66/147 (44%), Gaps = 15/147 (10%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             L +  +IA SG++ Q+ R+  ++ NIANA T   +       R  +      +   G 
Sbjct: 1   MSLSSVFNIAGSGMSAQNTRLNTVASNIANAETVSSSIDQTYRARHPVFATTFQNAQAGS 60

Query: 62  ---------------RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
                          +VK I  DQST    ++P HP AN  G V YPNVNV+ E ADM  
Sbjct: 61  SQSLFEDQGEAGQGVQVKGIVEDQSTLEARYEPNHPAANKDGYVYYPNVNVVEEMADMIS 120

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
            +R +  N + +  +  MM   L L +
Sbjct: 121 ASRAFQTNAELMNTAKSMMQKVLTLGQ 147


>gi|78485814|ref|YP_391739.1| flagellar basal-body rod protein FlgC [Thiomicrospira crunogena
           XCL-2]
 gi|78364100|gb|ABB42065.1| Flagellar basal-body rod protein FlgC [Thiomicrospira crunogena
           XCL-2]
          Length = 136

 Score =  108 bits (268), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 34/136 (25%), Positives = 67/136 (49%), Gaps = 4/136 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH----G 57
             +  +  I+ +G+  Q+ R+  I+ N+AN  +           ++ +    + +     
Sbjct: 1   MSMFPTLDISATGMHAQTVRLNTIASNMANVDSISSNSDETYRSKQPVFKTIMDNETGRP 60

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           +GGV V  I   ++    E++P HP+ANA G +  PNVNV+ E A+M   +R Y  N++ 
Sbjct: 61  AGGVMVDDIVESKAPLKMEYNPNHPMANAEGYIYRPNVNVVEEMANMMSASRSYETNIEV 120

Query: 118 IKQSHDMMTTTLDLLR 133
           +  S  ++  T+ + +
Sbjct: 121 LNTSKQLLLRTIQMGK 136


>gi|303326604|ref|ZP_07357046.1| flagellar basal-body rod protein FlgC [Desulfovibrio sp. 3_1_syn3]
 gi|302862592|gb|EFL85524.1| flagellar basal-body rod protein FlgC [Desulfovibrio sp. 3_1_syn3]
          Length = 146

 Score =  108 bits (268), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 46/147 (31%), Positives = 70/147 (47%), Gaps = 14/147 (9%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-- 58
           MD+L  +  I  SGL     R+  IS N+ANA+TT    G    RR  +     +     
Sbjct: 1   MDFLT-ALDIGASGLTADRTRINTISMNLANAKTTRTPQGGPYRRRTVVQAATDVDDPFS 59

Query: 59  -----------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                       GVRV  + +D+    + ++PGHP ANA G V YP++NV+ E A++   
Sbjct: 60  VHMRSALDRELKGVRVMAVTMDKRPLKQVYEPGHPDANAEGYVSYPDINVVEEMANLMSA 119

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLRD 134
            R Y AN+ T++    M    L++ + 
Sbjct: 120 QRNYEANVTTVEAIKGMYNKALEIGKS 146


>gi|78042758|ref|YP_359838.1| flagellar basal-body rod protein FlgC [Carboxydothermus
           hydrogenoformans Z-2901]
 gi|77994873|gb|ABB13772.1| flagellar basal-body rod protein FlgC [Carboxydothermus
           hydrogenoformans Z-2901]
          Length = 138

 Score =  108 bits (268), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 48/139 (34%), Positives = 67/139 (48%), Gaps = 8/139 (5%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH----- 56
               +S  I  S L      +  I +NIANA TT  TP    Y RK + FEE++      
Sbjct: 1   MAFFSSFQITASALTAHRLWLDTIVDNIANANTTR-TPAGGTYNRKDVIFEEILEAKAGF 59

Query: 57  GSGGVRVKKIGVDQ-STFVEEFDPGHPVANASG-IVKYPNVNVLVETADMRETNRLYMAN 114
             GGVRV +I  D  + +   F+P HP A+ +  +VKYPNVN+  E  ++    R Y AN
Sbjct: 60  KGGGVRVSQIVEDTKTPYRYVFNPNHPDADPNTGLVKYPNVNINDEIVNLLAAQRAYEAN 119

Query: 115 LQTIKQSHDMMTTTLDLLR 133
           +     +  M    L+L R
Sbjct: 120 VTVFNTAKAMYAKALELSR 138


>gi|86750885|ref|YP_487381.1| flagellar basal body rod protein FlgC [Rhodopseudomonas palustris
           HaA2]
 gi|86573913|gb|ABD08470.1| flagellar basal-body rod protein FlgC [Rhodopseudomonas palustris
           HaA2]
          Length = 141

 Score =  108 bits (268), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 59/134 (44%), Positives = 79/134 (58%), Gaps = 3/134 (2%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
               S  IA SGL  Q+ RM++ISENIANA +T   PG DPYRRK  +F   +  S   R
Sbjct: 7   DFARSMGIATSGLRAQAGRMRVISENIANADSTAQKPGGDPYRRKVPTFTSALDRSLDAR 66

Query: 63  VK---KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
                ++  D S F  +++P +P A+A+G VKYPNVN ++E  DMR   R Y ANL  I 
Sbjct: 67  TVALGRVKPDTSAFRLKYEPTNPAADAAGNVKYPNVNSMIEMTDMRSAQRSYEANLNVIS 126

Query: 120 QSHDMMTTTLDLLR 133
            +  M+  TLD+L+
Sbjct: 127 ATRRMIQRTLDILK 140


>gi|114765223|ref|ZP_01444355.1| flagellar basal-body rod protein C [Pelagibaca bermudensis
           HTCC2601]
 gi|114542358|gb|EAU45386.1| flagellar basal-body rod protein C [Roseovarius sp. HTCC2601]
          Length = 136

 Score =  108 bits (268), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 56/136 (41%), Positives = 81/136 (59%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD L     +A SG+  Q  R++++SEN+ANA +TG++ G DPYRRK ISF+E++    G
Sbjct: 1   MDTLKTVLSVAASGMRAQGERLKVVSENVANASSTGNSNGEDPYRRKIISFQEMVDRDSG 60

Query: 61  V---RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
                V  +  D + F   +DP HP A+  G VK  NVN ++E ++MRE +R Y ANL  
Sbjct: 61  ASMVEVDGVRRDDADFQLNYDPSHPAADEDGFVKVSNVNTILEMSNMREASRSYQANLNM 120

Query: 118 IKQSHDMMTTTLDLLR 133
            +    M +  LDLL+
Sbjct: 121 FETGRSMRSQLLDLLK 136


>gi|121607563|ref|YP_995370.1| flagellar basal-body rod protein FlgC [Verminephrobacter eiseniae
           EF01-2]
 gi|121552203|gb|ABM56352.1| flagellar basal-body rod protein FlgC [Verminephrobacter eiseniae
           EF01-2]
          Length = 134

 Score =  108 bits (268), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 36/134 (26%), Positives = 64/134 (47%), Gaps = 2/134 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM--HGSG 59
             +++  +++ S ++ Q+ R+ +++ N+AN        G     R+ +     M    + 
Sbjct: 1   MSMLSIFNLSGSAISAQAQRLNVVASNLANVDAVAGPDGQPYKARQVVFQTAPMGAPSAA 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GVRV  I   Q       DPGHP+A+A G V + NVN + E  DM    R Y  N++ + 
Sbjct: 61  GVRVIAISESQVPGRRVHDPGHPLADAQGYVTHSNVNAVQEMVDMISAARSYQNNVEVMN 120

Query: 120 QSHDMMTTTLDLLR 133
            +  ++  TL L +
Sbjct: 121 TAKSLLLKTLQLGQ 134


>gi|89092134|ref|ZP_01165089.1| flagellar basal-body rod protein FlgC [Oceanospirillum sp. MED92]
 gi|89083869|gb|EAR63086.1| flagellar basal-body rod protein FlgC [Oceanospirillum sp. MED92]
          Length = 145

 Score =  108 bits (268), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 38/144 (26%), Positives = 64/144 (44%), Gaps = 12/144 (8%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG---- 57
             L     IA S +  Q+ R+   + N+ANA +   +       RK +   +        
Sbjct: 1   MSLSNVFGIAGSAMNAQTIRLNTTASNLANAESVSSSLDETYRARKPVFAVQQTDPLAEP 60

Query: 58  --------SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNR 109
                     GV+V  I   ++   +E++P HP+A+  G V YPNVNV+ E ADM   +R
Sbjct: 61  DNEAGIAAGRGVQVLGIVESEAELRQEYNPAHPMADEQGFVYYPNVNVVEEMADMISASR 120

Query: 110 LYMANLQTIKQSHDMMTTTLDLLR 133
            +  N + +  +  M+  T+ L +
Sbjct: 121 SFQINTEIMNTAKQMLQQTIRLGQ 144


>gi|85716543|ref|ZP_01047513.1| flagellar basal body rod protein [Nitrobacter sp. Nb-311A]
 gi|85696544|gb|EAQ34432.1| flagellar basal body rod protein [Nitrobacter sp. Nb-311A]
          Length = 141

 Score =  108 bits (268), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 63/135 (46%), Positives = 82/135 (60%), Gaps = 3/135 (2%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
             + S  IA SGL  Q+ RM++ISENIAN  +T  TPG DPYRRK  +F   +  +   R
Sbjct: 7   DFMRSMSIATSGLRAQAGRMRVISENIANVDSTAQTPGGDPYRRKVPTFSSALDRTLDAR 66

Query: 63  VK---KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           V    ++  D STF  +++P +P A+ASG VKYPNVN LVE  DMR   R Y ANL  I 
Sbjct: 67  VVTLGRVKPDMSTFRVKYEPSNPAADASGNVKYPNVNSLVEMTDMRNAQRSYEANLNIIS 126

Query: 120 QSHDMMTTTLDLLRD 134
            +  M+  TLD+L+ 
Sbjct: 127 ATRRMIQRTLDILKS 141


>gi|307546970|ref|YP_003899449.1| flagellar basal body rod protein FlgC [Halomonas elongata DSM 2581]
 gi|307218994|emb|CBV44264.1| flagellar basal body rod protein FlgC [Halomonas elongata DSM 2581]
          Length = 135

 Score =  108 bits (268), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 32/133 (24%), Positives = 62/133 (46%), Gaps = 2/133 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             + +   I+ S ++ QS RM + + N+ANA +     G     ++ +        +G  
Sbjct: 1   MSMFSVFEISGSAMSAQSQRMNVTASNLANADSVAGPDGEAYRAKQVLFETRAQSRTGVG 60

Query: 62  RV--KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
            V  +++  D S    ++ P HP+A+  G V  PNV+   E  +M   +R Y AN++ + 
Sbjct: 61  GVGVREVIEDPSPMRRQYRPEHPLADDQGYVDMPNVDPAAEMVNMISASRSYQANVEVMD 120

Query: 120 QSHDMMTTTLDLL 132
            +  ++  TL + 
Sbjct: 121 TNKQLLLKTLSMG 133


>gi|167623359|ref|YP_001673653.1| flagellar basal body rod protein FlgC [Shewanella halifaxensis
           HAW-EB4]
 gi|167353381|gb|ABZ75994.1| flagellar basal-body rod protein FlgC [Shewanella halifaxensis
           HAW-EB4]
          Length = 138

 Score =  108 bits (268), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 43/138 (31%), Positives = 65/138 (47%), Gaps = 6/138 (4%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV------M 55
             L    ++A SG++ QS R+   + NIANA +   + G     R  I   E+       
Sbjct: 1   MSLFNIFNVAGSGMSAQSVRLNTTASNIANADSVSSSVGETYRARHPIFEAEMSKAQQHQ 60

Query: 56  HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
             S  V VK I        +EF P HP+A+  G +  PNVNV+ E A+M   +R Y  N+
Sbjct: 61  SASASVAVKGIVESDLPLNKEFSPDHPMADTDGFIYKPNVNVMEEMANMISASRSYQMNV 120

Query: 116 QTIKQSHDMMTTTLDLLR 133
           Q  + +  M+  TL + +
Sbjct: 121 QVTEAAKSMLQQTLRIGK 138


>gi|73539448|ref|YP_299815.1| flagellar basal-body rod protein FlgC [Ralstonia eutropha JMP134]
 gi|72122785|gb|AAZ64971.1| Flagellar basal-body rod protein FlgC [Ralstonia eutropha JMP134]
          Length = 135

 Score =  108 bits (268), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 42/135 (31%), Positives = 66/135 (48%), Gaps = 3/135 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--- 58
              +    +A S +A QS RM + + N+ANA +     G     ++ I       G    
Sbjct: 1   MPAMNIFDVAGSAMAAQSQRMNVTASNLANADSVVSPDGQAYRTKQVIFGMAPTPGQSDV 60

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
           GGV+V+ +  D S      +P HP+ANA G V  PNVN + E  +M   +R Y AN++ +
Sbjct: 61  GGVQVQGVMEDPSPPRMVHNPTHPMANAEGYVVMPNVNPVEEMVNMISASRSYQANVEVL 120

Query: 119 KQSHDMMTTTLDLLR 133
             + +MM  TL + +
Sbjct: 121 NSAKNMMLKTLTIGQ 135


>gi|291519599|emb|CBK74820.1| flagellar basal-body rod protein FlgC [Butyrivibrio fibrisolvens
           16/4]
          Length = 151

 Score =  107 bits (267), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 50/151 (33%), Positives = 74/151 (49%), Gaps = 20/151 (13%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-- 59
             L     I  +GL  Q  RM II+ENIAN  TT    G  PYRRK ++F E  + +G  
Sbjct: 1   MGLFQPFDIVATGLTAQRFRMDIIAENIANVSTTRTQNG-GPYRRKIVTFTEKNYHAGIP 59

Query: 60  ----------------GVRVKKIGVD-QSTFVEEFDPGHPVANASGIVKYPNVNVLVETA 102
                           GV+V K+  D ++ F+ E+DP HP A+ +G V+YPNVN + E  
Sbjct: 60  NFKNVLKDKQLRFYGNGVKVSKVSEDTETDFIMEYDPSHPDADENGYVRYPNVNTVTEMT 119

Query: 103 DMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++ + +R Y AN+        M    + + +
Sbjct: 120 NLIDASRSYEANVTAFDAIKSMAGYGIQIGQ 150


>gi|157961169|ref|YP_001501203.1| flagellar basal body rod protein FlgC [Shewanella pealeana ATCC
           700345]
 gi|157846169|gb|ABV86668.1| flagellar basal-body rod protein FlgC [Shewanella pealeana ATCC
           700345]
          Length = 138

 Score =  107 bits (267), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 42/138 (30%), Positives = 65/138 (47%), Gaps = 6/138 (4%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV------M 55
             L    ++A SG++ QS R+   + NIANA +   + G     R  I   E+       
Sbjct: 1   MSLFNIFNVAGSGMSAQSVRLNTTASNIANADSVSSSVGETYRARHPIFEAEMSKAQQHQ 60

Query: 56  HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
             +  V VK I        +EF P HP+A+  G +  PNVNV+ E A+M   +R Y  N+
Sbjct: 61  SAAQSVAVKGIVESDLPLNKEFSPDHPMADTDGFIYKPNVNVMEEMANMISASRSYQMNV 120

Query: 116 QTIKQSHDMMTTTLDLLR 133
           Q  + +  M+  TL + +
Sbjct: 121 QVTEAAKSMLQQTLRIGK 138


>gi|15615023|ref|NP_243326.1| flagellar basal body rod protein FlgC [Bacillus halodurans C-125]
 gi|10175080|dbj|BAB06179.1| flagellar basal-body rod protein [Bacillus halodurans C-125]
          Length = 152

 Score =  107 bits (267), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 48/152 (31%), Positives = 69/152 (45%), Gaps = 20/152 (13%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGD---TPGSDPYRRKTISFEEVMHGS 58
             +    +I+ S L  Q  RM +IS N+ANA TT         +PYRRK I+ +      
Sbjct: 1   MSIFHGMNISGSALTSQRLRMDVISANMANAETTRARQVNGEWEPYRRKMIAVQPNEQTP 60

Query: 59  -----------------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVET 101
                             GV+V  I  DQ+ F   + P HP AN  G V+ PNV+ L E 
Sbjct: 61  FSAHLHTAMKRSESKIGNGVKVSAIVEDQTPFKLVYQPDHPDANEEGYVEMPNVDPLREM 120

Query: 102 ADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            D+    R Y AN+ T+  S +++   L++ R
Sbjct: 121 VDLMSATRSYEANVTTLNASKNILMKALEIGR 152


>gi|90021857|ref|YP_527684.1| flagellar basal body rod protein FlgC [Saccharophagus degradans
           2-40]
 gi|89951457|gb|ABD81472.1| flagellar basal-body rod protein FlgC [Saccharophagus degradans
           2-40]
          Length = 144

 Score =  107 bits (267), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 37/144 (25%), Positives = 59/144 (40%), Gaps = 12/144 (8%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             L      A SG+  QS R+   + NIANA T   +  +    R  +          G 
Sbjct: 1   MSLSGIFDTAGSGMNAQSVRLNTTASNIANAETASSSADTVYRGRHPVFATVQAGYMQGQ 60

Query: 62  ------------RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNR 109
                       +V  I    +     ++PGHP A+  G V YPNVN++ E A+M   +R
Sbjct: 61  VGALDDEQEMGVQVMGIVESDAPLQRRYEPGHPQADEEGYVHYPNVNIVEEMANMISASR 120

Query: 110 LYMANLQTIKQSHDMMTTTLDLLR 133
            +  N++ +  +  M+   L L +
Sbjct: 121 SFQMNVEVMNSAKQMVQRVLQLGQ 144


>gi|311694359|gb|ADP97232.1| flagellar basal-body rod protein FlgC-like protein [marine
           bacterium HP15]
          Length = 149

 Score =  107 bits (267), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 45/148 (30%), Positives = 62/148 (41%), Gaps = 16/148 (10%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS----------- 50
             L +   IA SG+  QS R+   + NIANA T   + G     RK +            
Sbjct: 1   MSLGSIFDIAGSGMTAQSLRLNTTASNIANAETASSSTGETYRARKPVFSAIQQSLMNPG 60

Query: 51  -----FEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
                         GVRV  I    +     ++P HP AN  G V YPNVNV+ E ADM 
Sbjct: 61  QGGLPMAADEGPGAGVRVDGIVESDAELQMRYEPHHPAANEDGYVFYPNVNVVEEMADMM 120

Query: 106 ETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++R +  N+  +  +  MM   L L +
Sbjct: 121 SSSRSFQMNVDVMNTAKSMMQRILTLGQ 148


>gi|149182501|ref|ZP_01860974.1| flagellar basal-body rod protein C [Bacillus sp. SG-1]
 gi|148849761|gb|EDL63938.1| flagellar basal-body rod protein C [Bacillus sp. SG-1]
          Length = 153

 Score =  107 bits (267), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 47/153 (30%), Positives = 71/153 (46%), Gaps = 21/153 (13%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDT---PGSDPYRRKTISFE------ 52
             +  S + + S L+ Q  RM +IS N+ANA TT          PYRRK++ F+      
Sbjct: 1   MSIFHSMNTSASALSAQRLRMDVISSNMANADTTRGKLVDGEWQPYRRKSVVFQPNGGQF 60

Query: 53  -----------EVMHGSGGVRVKKIGVDQ-STFVEEFDPGHPVANASGIVKYPNVNVLVE 100
                      +      GV+V +I  D+ + F   +DP HP AN  G V+ PNV+ L E
Sbjct: 61  SSFLNKAMNTKDSGSLGNGVKVSEIKEDEETPFNLVYDPEHPDANQDGYVQMPNVDPLRE 120

Query: 101 TADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             D+    R Y AN+     +  MM  +L++ +
Sbjct: 121 MIDLISATRSYEANVTVFNANKSMMMKSLEIGK 153


>gi|332531616|ref|ZP_08407513.1| flagellar basal-body rod protein FlgC [Hylemonella gracilis ATCC
           19624]
 gi|332038979|gb|EGI75408.1| flagellar basal-body rod protein FlgC [Hylemonella gracilis ATCC
           19624]
          Length = 136

 Score =  107 bits (267), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 32/136 (23%), Positives = 66/136 (48%), Gaps = 4/136 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS----FEEVMHG 57
             + +   ++ S ++ Q+ R+ +++ N+ANA       G     R+ +     F+E   G
Sbjct: 1   MSMFSIFGVSGSAISAQAQRLNVVASNLANADAVAGPDGQFYKARQVVFETLPFDEATPG 60

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           + GV++  +   Q+     ++P HP A+A G V   NVN + E  +M   +R Y  N++ 
Sbjct: 61  AAGVKINAVTESQAPARRTYEPTHPSADADGYVNQSNVNPVEEMVNMISASRSYQNNVEV 120

Query: 118 IKQSHDMMTTTLDLLR 133
           +  +  ++  TL + +
Sbjct: 121 MNTAKTLLLKTLQMGQ 136


>gi|83594157|ref|YP_427909.1| flagellar basal body rod protein FlgC [Rhodospirillum rubrum ATCC
           11170]
 gi|83577071|gb|ABC23622.1| Flagellar basal-body rod protein FlgC [Rhodospirillum rubrum ATCC
           11170]
          Length = 137

 Score =  107 bits (267), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 59/137 (43%), Positives = 82/137 (59%), Gaps = 3/137 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD L  +A IA SGL  Q+ R++ I++N+ANA +  +  G DPYRR+ ++F+ VM    G
Sbjct: 1   MDELKQTAAIATSGLKAQTERLRTIAQNMANADSMAERQGEDPYRRRVVTFKSVMDREVG 60

Query: 61  VRVKK---IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
             + +   +  D S F  ++DP HP A+A G V  PNVN +VE  DMRE  R Y ANL  
Sbjct: 61  AEMVRTGRVREDMSAFTRKYDPSHPGADAEGYVLAPNVNPMVEMMDMREAQRSYEANLNV 120

Query: 118 IKQSHDMMTTTLDLLRD 134
           I  + +M   TL+LLR 
Sbjct: 121 ITATREMTRNTLELLRS 137


>gi|212634346|ref|YP_002310871.1| flagellar basal body rod protein FlgC [Shewanella piezotolerans
           WP3]
 gi|212555830|gb|ACJ28284.1| Flagellar basal-body rod protein FlgC [Shewanella piezotolerans
           WP3]
          Length = 138

 Score =  107 bits (266), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 44/138 (31%), Positives = 64/138 (46%), Gaps = 6/138 (4%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV------M 55
             L    ++A SG++ QS R+   + NIANA     + G     R  I   E+       
Sbjct: 1   MSLFNIFNVAGSGMSAQSVRLNTTASNIANADAVSSSAGETYRARHPIFEAEMSKAQQHQ 60

Query: 56  HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
             S  V VK I        +EF PGHP+A+  G +  PNVNV+ E A+M   +R Y  N+
Sbjct: 61  SASQSVAVKGIVESDLPLNKEFSPGHPMADTDGFIYKPNVNVMEEMANMISASRSYQMNV 120

Query: 116 QTIKQSHDMMTTTLDLLR 133
           Q    +  M+  TL + +
Sbjct: 121 QVTDAAKSMLQQTLRIGK 138


>gi|15596275|ref|NP_249769.1| flagellar basal body rod protein FlgC [Pseudomonas aeruginosa PAO1]
 gi|107100523|ref|ZP_01364441.1| hypothetical protein PaerPA_01001548 [Pseudomonas aeruginosa PACS2]
 gi|116049007|ref|YP_792191.1| flagellar basal body rod protein FlgC [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|152984084|ref|YP_001349652.1| flagellar basal body rod protein FlgC [Pseudomonas aeruginosa PA7]
 gi|218892958|ref|YP_002441827.1| flagellar basal body rod protein FlgC [Pseudomonas aeruginosa
           LESB58]
 gi|254234214|ref|ZP_04927537.1| flagellar basal-body rod protein FlgC [Pseudomonas aeruginosa
           C3719]
 gi|254239436|ref|ZP_04932758.1| flagellar basal-body rod protein FlgC [Pseudomonas aeruginosa 2192]
 gi|296390558|ref|ZP_06880033.1| flagellar basal body rod protein FlgC [Pseudomonas aeruginosa PAb1]
 gi|313106033|ref|ZP_07792292.1| flagellar basal-body rod protein FlgC [Pseudomonas aeruginosa
           39016]
 gi|9946994|gb|AAG04467.1|AE004539_9 flagellar basal-body rod protein FlgC [Pseudomonas aeruginosa PAO1]
 gi|115584228|gb|ABJ10243.1| flagellar basal-body rod protein FlgC [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|126166145|gb|EAZ51656.1| flagellar basal-body rod protein FlgC [Pseudomonas aeruginosa
           C3719]
 gi|126192814|gb|EAZ56877.1| flagellar basal-body rod protein FlgC [Pseudomonas aeruginosa 2192]
 gi|150959242|gb|ABR81267.1| flagellar basal-body rod protein FlgC [Pseudomonas aeruginosa PA7]
 gi|218773186|emb|CAW28998.1| flagellar basal-body rod protein FlgC [Pseudomonas aeruginosa
           LESB58]
 gi|310878794|gb|EFQ37388.1| flagellar basal-body rod protein FlgC [Pseudomonas aeruginosa
           39016]
          Length = 146

 Score =  107 bits (266), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 46/146 (31%), Positives = 69/146 (47%), Gaps = 14/146 (9%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-- 59
             L +  +IA SG++ QS R+  ++ NIANA T   +       R  +         G  
Sbjct: 1   MSLASVFNIAGSGMSAQSTRLNTVASNIANAETVSSSVDKTYRARHPVFSTMFQQAQGDS 60

Query: 60  ------------GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                       GV+V  I  DQS+ +  ++P HP A+A+G V YPNVNV+ E ADM   
Sbjct: 61  GSLFADQDSSGAGVQVLGIVEDQSSLMPRYEPNHPAADANGYVYYPNVNVVEEMADMISA 120

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
           +R +  N + +  +  MM   L L +
Sbjct: 121 SRAFQTNAEMMNTAKQMMQKVLTLGQ 146


>gi|292669734|ref|ZP_06603160.1| flagellar basal-body rod protein FlgC [Selenomonas noxia ATCC
           43541]
 gi|292648531|gb|EFF66503.1| flagellar basal-body rod protein FlgC [Selenomonas noxia ATCC
           43541]
          Length = 151

 Score =  107 bits (266), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 49/148 (33%), Positives = 66/148 (44%), Gaps = 17/148 (11%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE--------- 52
             +      A SGL  +  RM +IS NIANA TT    G   +RR  +            
Sbjct: 1   MGMFLGIDAAASGLTAERLRMDVISNNIANANTTRAQGGGAYHRRYVVFQPREKGNGIGF 60

Query: 53  --------EVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
                   + +    GVR   I  D+S     ++PGHP ANA G V+ PNVN++ E  DM
Sbjct: 61  ESFLARASDRLRPGDGVRAVSIETDRSQGTLVYEPGHPDANADGYVERPNVNIVAEMVDM 120

Query: 105 RETNRLYMANLQTIKQSHDMMTTTLDLL 132
              +R Y AN  TI  +  M+T  L + 
Sbjct: 121 ISASRGYEANATTINAAKSMVTAALRIG 148


>gi|26991079|ref|NP_746504.1| flagellar basal body rod protein FlgC [Pseudomonas putida KT2440]
 gi|24986114|gb|AAN69968.1|AE016635_4 flagellar basal-body rod protein FlgC [Pseudomonas putida KT2440]
 gi|313497759|gb|ADR59125.1| FlgC [Pseudomonas putida BIRD-1]
          Length = 147

 Score =  107 bits (266), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 45/147 (30%), Positives = 67/147 (45%), Gaps = 15/147 (10%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             L +  +IA SG++ Q+ R+  ++ NIANA T   +       R  +      +   G 
Sbjct: 1   MSLSSVFNIAGSGMSAQNTRLNTVASNIANAETVSSSIDQTYRARHPVFATTFQNAQAGS 60

Query: 62  ---------------RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
                          +VK I  DQST    ++P HP AN  G V YPNVNV+ E ADM  
Sbjct: 61  SQSLFEDQGEAGQGVQVKGIVEDQSTLEARYEPNHPAANKDGYVYYPNVNVVEEMADMIS 120

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
            +R +  N + +  + +MM   L L +
Sbjct: 121 ASRAFQTNAELMNTAKNMMQKVLTLGQ 147


>gi|256830790|ref|YP_003159518.1| flagellar basal-body rod protein FlgC [Desulfomicrobium baculatum
           DSM 4028]
 gi|256579966|gb|ACU91102.1| flagellar basal-body rod protein FlgC [Desulfomicrobium baculatum
           DSM 4028]
          Length = 145

 Score =  107 bits (266), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 42/146 (28%), Positives = 68/146 (46%), Gaps = 14/146 (9%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR-------------K 47
           MD++  +  +  S L  +   + +IS N+ANA+TT    G    R+              
Sbjct: 1   MDFMT-AIDVGASALKAERTHLNVISMNLANAKTTRTVDGGPYRRKEVVFKETEVQSPFS 59

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                 +     GVRV+ +  D+    + ++PGHP A+  G V YP++NV+ E  +M   
Sbjct: 60  KAMNSALDQDVKGVRVESVQNDRRPLKQVYEPGHPDADEEGYVSYPDINVVEEMTNMLSA 119

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y AN+ TI  S  M +  L++ R
Sbjct: 120 MRAYEANVSTITTSKSMFSKALEIGR 145


>gi|325982373|ref|YP_004294775.1| flagellar basal-body rod protein FlgC [Nitrosomonas sp. AL212]
 gi|325531892|gb|ADZ26613.1| flagellar basal-body rod protein FlgC [Nitrosomonas sp. AL212]
          Length = 133

 Score =  107 bits (266), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 39/132 (29%), Positives = 67/132 (50%), Gaps = 2/132 (1%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG--GV 61
           L     IA+S ++ QS R+ +++ N++NA +   + G     R+ +        +G  GV
Sbjct: 2   LFNVFGIASSAMSAQSQRLNVVASNLSNADSVTSSTGEPYRGRQVVFSTLRADANGAAGV 61

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
           +V  +  D S   + F+P HP AN SG V  PNVNV+ E  +M   +R Y  ++  +  +
Sbjct: 62  KVAGVIHDPSPMRQVFEPNHPFANTSGYVTMPNVNVVDEMVNMMSASRSYQNSVDMMNTT 121

Query: 122 HDMMTTTLDLLR 133
             ++  TL L +
Sbjct: 122 KSLLQKTLTLGQ 133


>gi|302670716|ref|YP_003830676.1| flagellar basal-body rod protein FlgC [Butyrivibrio proteoclasticus
           B316]
 gi|302395189|gb|ADL34094.1| flagellar basal-body rod protein FlgC [Butyrivibrio proteoclasticus
           B316]
          Length = 149

 Score =  107 bits (266), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 50/148 (33%), Positives = 73/148 (49%), Gaps = 16/148 (10%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV------- 54
             +  S +I +SG+  Q  RM IISENIANA TT    G  PY RK + F E        
Sbjct: 1   MNIFDSFNINSSGMTAQRFRMDIISENIANANTTRTKDGDTPYTRKVVRFAEKGTQTPFS 60

Query: 55  --------MHGSGGVRVKKIGVDQ-STFVEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
                    +   GV+V ++  D  + +   +DP HP A+A+G V YPNVN + E  ++ 
Sbjct: 61  RILNERLDHYSGRGVKVTQVQDDTWTQYNIVYDPSHPDADANGYVTYPNVNTVTEMTNLI 120

Query: 106 ETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           + +R Y AN      S ++    L+L +
Sbjct: 121 DASRSYEANATAFDASKNIAARGLELGQ 148


>gi|197120201|ref|YP_002140628.1| flagellar basal body rod protein FlgC [Geobacter bemidjiensis Bem]
 gi|197089561|gb|ACH40832.1| flagellar basal body rod protein FlgC [Geobacter bemidjiensis Bem]
          Length = 145

 Score =  107 bits (266), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 43/145 (29%), Positives = 66/145 (45%), Gaps = 13/145 (8%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
                S  I+ + LA +  RM +IS N+AN  +T    G    R+  +     +      
Sbjct: 1   MDFFTSMDISATALAAERTRMNLISSNLANVNSTRTAEGGPYRRKDAVFTATPLKEGASF 60

Query: 62  -------------RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                        +V +I  D      +++PGHP A+ +G V YPN+NV+ E ADM   +
Sbjct: 61  GAALSQATSARSVQVTQIKEDPRPPRLQYEPGHPDADPNGYVAYPNINVVEEMADMITAS 120

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R Y AN+   + S  M   TL+L+R
Sbjct: 121 RSYEANITATQASKSMALKTLELMR 145


>gi|150019082|ref|YP_001311336.1| flagellar basal body rod protein FlgC [Clostridium beijerinckii
           NCIMB 8052]
 gi|149905547|gb|ABR36380.1| flagellar basal-body rod protein FlgC [Clostridium beijerinckii
           NCIMB 8052]
          Length = 135

 Score =  107 bits (266), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 50/135 (37%), Positives = 70/135 (51%), Gaps = 3/135 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--- 58
                S  I+ +GL+ +  RM  I+ N+ANA TT    G  PY RK   F+E +  +   
Sbjct: 1   MNAFTSMQISATGLSAERLRMDTITSNMANASTTRSANGKGPYVRKVAVFQEALDANKDM 60

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
            GV+  KI  D S   + +DP HP A+++G V  PNVNVL E ADM    R Y AN+ T 
Sbjct: 61  AGVKAVKIENDPSPLRKVYDPTHPDADSNGYVTMPNVNVLNEMADMMVATRSYEANVDTF 120

Query: 119 KQSHDMMTTTLDLLR 133
                M +  L++ +
Sbjct: 121 NALKSMFSKALEIGK 135


>gi|259908814|ref|YP_002649170.1| flagellar basal body rod protein FlgC [Erwinia pyrifoliae Ep1/96]
 gi|224964436|emb|CAX55945.1| Cell-proximal portion of basal-body rod [Erwinia pyrifoliae Ep1/96]
 gi|283478796|emb|CAY74712.1| Flagellar basal-body rod protein flgC [Erwinia pyrifoliae DSM
           12163]
 gi|310767288|gb|ADP12238.1| flagellar basal body rod protein FlgC [Erwinia sp. Ejp617]
          Length = 134

 Score =  107 bits (266), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 40/134 (29%), Positives = 68/134 (50%), Gaps = 2/134 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM--HGSG 59
             L     IA S +A QS R+ + + N+ANA +     G     ++ +          +G
Sbjct: 1   MALTRIFDIAGSAMAAQSQRLNVSASNLANADSVTGPDGQPYVAKQVVFQTNAAPGSPTG 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GVRV ++  D +     ++PG+P+A+A G +K PNV+V+ ET +    +R Y AN++ + 
Sbjct: 61  GVRVAEVINDPTPAKLVYEPGNPMADARGYIKMPNVDVVAETVNTLSASRSYQANVEVLN 120

Query: 120 QSHDMMTTTLDLLR 133
               MM  TL + +
Sbjct: 121 TVKQMMMKTLTMGQ 134


>gi|170722894|ref|YP_001750582.1| flagellar basal body rod protein FlgC [Pseudomonas putida W619]
 gi|169760897|gb|ACA74213.1| flagellar basal-body rod protein FlgC [Pseudomonas putida W619]
          Length = 147

 Score =  107 bits (266), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 45/147 (30%), Positives = 67/147 (45%), Gaps = 15/147 (10%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG- 60
             L +  +IA SG++ Q+ R+  ++ NIANA T   +       R  +      +   G 
Sbjct: 1   MSLSSVFNIAGSGMSAQNTRLNTVASNIANAETVSSSIDQTYRARHPVFATTFQNAQAGG 60

Query: 61  --------------VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
                         V+VK I  DQS     ++P HP AN  G V YPNVNV+ E ADM  
Sbjct: 61  SQSLFEDQGEAGQGVQVKGIIEDQSNLEARYEPNHPAANKDGYVYYPNVNVVEEMADMIS 120

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
            +R +  N + +  + +MM   L L +
Sbjct: 121 ASRAFQTNAELMNTAKNMMQKVLTLGQ 147


>gi|317133491|ref|YP_004092805.1| flagellar basal-body rod protein FlgC [Ethanoligenens harbinense
           YUAN-3]
 gi|315471470|gb|ADU28074.1| flagellar basal-body rod protein FlgC [Ethanoligenens harbinense
           YUAN-3]
          Length = 143

 Score =  106 bits (265), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 51/143 (35%), Positives = 73/143 (51%), Gaps = 14/143 (9%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG------ 57
            + + +I  SGL  Q  RM +ISEN+AN  TT    G  PY+RKT+SF E          
Sbjct: 2   FLNALNIPGSGLTAQRLRMDVISENLANQDTTETADG-GPYQRKTVSFSERTQPTFDGYL 60

Query: 58  -------SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRL 110
                   GGV+V  I  D S F   +DP +P A A G V+ PNV+ + E  D+ E++R 
Sbjct: 61  AGATGEGPGGVQVDAIETDSSDFKLSYDPTNPNAGADGYVRLPNVDTVTEMTDLMESSRS 120

Query: 111 YMANLQTIKQSHDMMTTTLDLLR 133
           Y A++        M  ++LD+ +
Sbjct: 121 YSADVTAFNALKGMAVSSLDIGK 143


>gi|322421737|ref|YP_004200960.1| flagellar basal-body rod protein FlgC [Geobacter sp. M18]
 gi|320128124|gb|ADW15684.1| flagellar basal-body rod protein FlgC [Geobacter sp. M18]
          Length = 145

 Score =  106 bits (265), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 48/145 (33%), Positives = 70/145 (48%), Gaps = 13/145 (8%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE--------- 52
                S  I+ S LA +  RM +IS N+AN  +T    G    R+  +            
Sbjct: 1   MDFFTSMDISASALAAERTRMNLISSNLANVNSTRTAEGGPYRRKDAVFTATPVTEGKSF 60

Query: 53  ----EVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                  + +  V+V +I  DQ     +++PGHP A+A+G V YPN+NV+ E ADM   +
Sbjct: 61  GAALSRANEARSVQVTQINEDQRPPRLQYEPGHPDADANGYVAYPNINVVEEMADMITAS 120

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R Y AN+   + +  M   TLDLLR
Sbjct: 121 RSYEANITATQAAKSMALKTLDLLR 145


>gi|187935497|ref|YP_001885039.1| flagellar basal body rod protein FlgC [Clostridium botulinum B str.
           Eklund 17B]
 gi|187723650|gb|ACD24871.1| flagellar basal-body rod protein FlgC [Clostridium botulinum B str.
           Eklund 17B]
          Length = 135

 Score =  106 bits (265), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 46/135 (34%), Positives = 72/135 (53%), Gaps = 3/135 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--- 58
                S  I+ +G++ +  RM  I+ N+ N+ TT    GS PY RK   F+E +  +   
Sbjct: 1   MNAFTSMQISATGISAERLRMDTITSNMTNSSTTRSADGSGPYVRKIAVFQEALDENRKM 60

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
            G++  KI  D+S   + + P HP A+ +G V  PNVNVL E ADM  + R Y AN++T+
Sbjct: 61  AGIKPVKIVEDKSPLRKVYKPTHPDADETGYVTMPNVNVLNEMADMMVSTRSYEANVETL 120

Query: 119 KQSHDMMTTTLDLLR 133
                M +  L++ +
Sbjct: 121 NALKGMFSKALEIGK 135


>gi|225619783|ref|YP_002721040.1| flagellar basal body rod protein FlgC [Brachyspira hyodysenteriae
           WA1]
 gi|225214602|gb|ACN83336.1| flagellar basal body rod protein FlgC [Brachyspira hyodysenteriae
           WA1]
          Length = 153

 Score =  106 bits (265), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 45/152 (29%), Positives = 68/152 (44%), Gaps = 20/152 (13%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE-------- 53
             + +  + + SGL  Q  R+ +I++NIAN  TT  T G    R + I            
Sbjct: 1   MGIFSIINTSGSGLTAQRTRLDVIADNIANVNTTRTTEGGAFRRSRVIFKPRDDGNKYRS 60

Query: 54  -------VMHGSGGVRVKKIGVD-QSTFVEEFDPGHPVA----NASGIVKYPNVNVLVET 101
                    +   GVRV  I  D ++     +DP HP A      +G V+ PNVN + E 
Sbjct: 61  PFLPDALQPNVGTGVRVFSIEKDMETATRFVYDPSHPDAIKYGEKAGYVEMPNVNPVTEM 120

Query: 102 ADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            DM E +R Y AN   I+ +  M  + L+++R
Sbjct: 121 VDMMEASRAYEANSTMIQSAKTMFGSALNIIR 152


>gi|171059414|ref|YP_001791763.1| flagellar basal-body rod protein FlgC [Leptothrix cholodnii SP-6]
 gi|170776859|gb|ACB34998.1| flagellar basal-body rod protein FlgC [Leptothrix cholodnii SP-6]
          Length = 136

 Score =  106 bits (265), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 40/134 (29%), Positives = 66/134 (49%), Gaps = 2/134 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-- 59
             ++   ++A S ++ QS R+  ++ N+ANA T     G     R+ +     M   G  
Sbjct: 1   MSMLNIFNVAGSAVSAQSQRLNAVATNLANADTVAGPDGQSFKARQVMFQSVQMGEMGAA 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GV+V +I  DQS      DP HP A+A G V Y NVN + E  +M   +R Y  N++ + 
Sbjct: 61  GVKVSQITEDQSPGRRVHDPKHPQADAEGYVTYSNVNAVEEMVNMISASRSYQNNVEVMN 120

Query: 120 QSHDMMTTTLDLLR 133
            +  ++  TL + +
Sbjct: 121 TAKTLLLKTLQMGQ 134


>gi|296127542|ref|YP_003634794.1| flagellar basal-body rod protein FlgC [Brachyspira murdochii DSM
           12563]
 gi|296019358|gb|ADG72595.1| flagellar basal-body rod protein FlgC [Brachyspira murdochii DSM
           12563]
          Length = 153

 Score =  106 bits (265), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 45/152 (29%), Positives = 68/152 (44%), Gaps = 20/152 (13%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE-------- 53
             + +  + + SGL  Q  R+ +I++NIAN  TT  T G    R + I            
Sbjct: 1   MGIFSIINTSGSGLTAQRTRLDVIADNIANVNTTRTTEGGAFRRSRVIFKPRDDGNKYRS 60

Query: 54  -------VMHGSGGVRVKKIGVD-QSTFVEEFDPGHPVA----NASGIVKYPNVNVLVET 101
                    +   GVRV  I  D ++     +DP HP A      +G V+ PNVN + E 
Sbjct: 61  PFLPEALQPNVGTGVRVFSIEKDMETATRFVYDPSHPDAIKYGEKAGYVEMPNVNPVTEM 120

Query: 102 ADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            DM E +R Y AN   I+ +  M  + L+++R
Sbjct: 121 VDMMEASRAYEANSTMIQSAKTMFGSALNIIR 152


>gi|260774936|ref|ZP_05883837.1| flagellar basal-body rod protein FlgC [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260609191|gb|EEX35349.1| flagellar basal-body rod protein FlgC [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 138

 Score =  106 bits (265), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 37/138 (26%), Positives = 60/138 (43%), Gaps = 6/138 (4%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             L    ++  S ++ +S R+   S N+ANA +   +       R  +   E+     G 
Sbjct: 1   MSLFNVFNVTGSAMSAESVRLNTTSSNLANADSVSSSAKDTYKARHAVFGAELSKAKYGR 60

Query: 62  ------RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
                 +V  I         E++P HP+AN  G +  PNVNV+ E A+M   +R Y  N+
Sbjct: 61  DHTVPVQVLGIVESDKPLDAEYNPEHPLANDDGYIYKPNVNVMEEMANMISASRSYQTNV 120

Query: 116 QTIKQSHDMMTTTLDLLR 133
           Q    S  M+  TL + +
Sbjct: 121 QVADASKQMLLRTLQMGQ 138


>gi|300870979|ref|YP_003785850.1| flagellar basal body rod protein FlgC [Brachyspira pilosicoli
           95/1000]
 gi|300688678|gb|ADK31349.1| flagellar basal body rod protein, FlgC [Brachyspira pilosicoli
           95/1000]
          Length = 153

 Score =  106 bits (265), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 44/152 (28%), Positives = 68/152 (44%), Gaps = 20/152 (13%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE-------- 53
             + +  + + SGL  Q  R+ +I++NIAN  TT  T G    R + +            
Sbjct: 1   MGIFSIINTSGSGLTAQRTRLDVIADNIANVNTTRTTEGGAFRRSRVVFKPRDDGNKYRS 60

Query: 54  -------VMHGSGGVRVKKIGVD-QSTFVEEFDPGHPVA----NASGIVKYPNVNVLVET 101
                    +   GVRV  I  D ++     +DP HP A      +G V+ PNVN + E 
Sbjct: 61  PFLPEALQPNVGTGVRVFSIEKDMETATRFVYDPSHPDAIKYGEKAGYVEMPNVNPVTEM 120

Query: 102 ADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            DM E +R Y AN   I+ +  M  + L+++R
Sbjct: 121 VDMMEASRAYEANSTMIQSAKTMFGSALNIIR 152


>gi|163758013|ref|ZP_02165101.1| flagellar basal-body rod protein C [Hoeflea phototrophica DFL-43]
 gi|162284302|gb|EDQ34585.1| flagellar basal-body rod protein C [Hoeflea phototrophica DFL-43]
          Length = 142

 Score =  106 bits (265), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 77/135 (57%), Positives = 99/135 (73%), Gaps = 3/135 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
           D L  ++ IA+SGL VQ  RM+I+SEN+AN+++TGDTPG+D YRRKTISF   +  S G 
Sbjct: 5   DPLSLASRIASSGLDVQETRMRILSENLANSQSTGDTPGADAYRRKTISFSWELDRSIGA 64

Query: 62  ---RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
              +V KI  D   F  ++DPG+P AN  G+VK PNVNVLVE ADMRE NR Y ANLQT+
Sbjct: 65  SRAKVAKIDFDPGEFNVQYDPGNPAANEEGMVKLPNVNVLVELADMREANRSYEANLQTV 124

Query: 119 KQSHDMMTTTLDLLR 133
           KQ+ ++++ TLDLLR
Sbjct: 125 KQTRELVSMTLDLLR 139


>gi|238927420|ref|ZP_04659180.1| flagellar basal body rod protein [Selenomonas flueggei ATCC 43531]
 gi|238884702|gb|EEQ48340.1| flagellar basal body rod protein [Selenomonas flueggei ATCC 43531]
          Length = 151

 Score =  106 bits (265), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 47/148 (31%), Positives = 64/148 (43%), Gaps = 17/148 (11%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE--------- 52
             +      A SGL  +  RM +IS NIANA TT    G   +RR  +            
Sbjct: 1   MGMFLGIDAAASGLTAERLRMDVISNNIANANTTRTQGGGAYHRRYVVFQPREKGTGIGF 60

Query: 53  --------EVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
                     +    GVR   I  D +     ++PGHP ANA G V+ PNVN++ E  DM
Sbjct: 61  ESFLARASNRLRPGDGVRAVSIQADNTQGPLVYEPGHPDANADGYVERPNVNIVAEMVDM 120

Query: 105 RETNRLYMANLQTIKQSHDMMTTTLDLL 132
              +R Y AN  TI  +  M++  L + 
Sbjct: 121 ISASRGYEANTTTINAAKSMVSAALRIG 148


>gi|188579865|ref|YP_001923310.1| flagellar basal body rod protein FlgC [Methylobacterium populi
           BJ001]
 gi|179343363|gb|ACB78775.1| flagellar basal-body rod protein FlgC [Methylobacterium populi
           BJ001]
          Length = 138

 Score =  106 bits (265), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 66/137 (48%), Positives = 100/137 (72%), Gaps = 3/137 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           +D L++++ +A++GL  QS RM+++SEN+ANA++TG +PG+DPY RKT++F   +  + G
Sbjct: 2   IDPLLSASRLASAGLEAQSLRMRVVSENLANAQSTGASPGADPYARKTVTFRAELDRAAG 61

Query: 61  V---RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           +   R+++IG D + F  E DP +P A+ +G VK PNVN+LVE ADMRE NR Y ANLQ 
Sbjct: 62  IASVRLREIGTDDAPFRTEHDPANPAADENGNVKLPNVNMLVEMADMREANRSYEANLQV 121

Query: 118 IKQSHDMMTTTLDLLRD 134
           IKQ+  M+ + +DLL+ 
Sbjct: 122 IKQARAMVASVIDLLKS 138


>gi|312962590|ref|ZP_07777080.1| flagellar basal-body rod protein FlgC [Pseudomonas fluorescens WH6]
 gi|311283170|gb|EFQ61761.1| flagellar basal-body rod protein FlgC [Pseudomonas fluorescens WH6]
          Length = 147

 Score =  106 bits (265), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 45/147 (30%), Positives = 67/147 (45%), Gaps = 15/147 (10%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS----------- 50
             L +  +IA SG++ Q+ R+  ++ NIANA T   +       R  +            
Sbjct: 1   MSLSSVFNIAGSGMSAQTTRLNTVASNIANAETVSSSIDQTYRARHPVFATMFQAGQNGG 60

Query: 51  ----FEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
               F+E      GV+V  +  DQS     ++P HP AN  G V YPNVNV+ E ADM  
Sbjct: 61  SDSLFQEQDAAGKGVQVLGVVEDQSNLEARYEPNHPAANEKGYVYYPNVNVVEEMADMIS 120

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
            +R +  N + +  +  MM   L L +
Sbjct: 121 ASRSFQTNAEMMNTAKTMMQKVLTLGQ 147


>gi|218133658|ref|ZP_03462462.1| hypothetical protein BACPEC_01527 [Bacteroides pectinophilus ATCC
           43243]
 gi|217991033|gb|EEC57039.1| hypothetical protein BACPEC_01527 [Bacteroides pectinophilus ATCC
           43243]
          Length = 149

 Score =  106 bits (265), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 47/148 (31%), Positives = 71/148 (47%), Gaps = 16/148 (10%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-- 59
             L +  +IA+SG+  Q  R  +ISENIAN  TT  + G+   R++    E+        
Sbjct: 1   MALFSQFNIASSGMTAQRLRTDVISENIANVNTTRTSDGTPYVRKEVYFTEKGKSVQSFE 60

Query: 60  -------------GVRVKKIGVDQS-TFVEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
                        GV+V  I  D +   V+++DP HP A+ +G V YPNVNV+ E  D+ 
Sbjct: 61  HVFEAARNGIAGNGVKVTSILEDNTTDMVKKYDPSHPDADENGYVTYPNVNVVQEMTDLI 120

Query: 106 ETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  R Y AN+        M T  L++ +
Sbjct: 121 DATRSYEANVTAFNAGKSMATKGLEIGK 148


>gi|39995516|ref|NP_951467.1| flagellar basal-body rod protein FlgC [Geobacter sulfurreducens
           PCA]
 gi|39982279|gb|AAR33740.1| flagellar basal-body rod protein FlgC [Geobacter sulfurreducens
           PCA]
 gi|298504516|gb|ADI83239.1| flagellar basal body rod protein FlgC [Geobacter sulfurreducens
           KN400]
          Length = 146

 Score =  106 bits (265), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 42/144 (29%), Positives = 69/144 (47%), Gaps = 13/144 (9%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR-------------KT 48
               ++  +++S L+ +  RM +IS N+ANA +T    G    R+             ++
Sbjct: 1   MDFFSAMQVSSSALSAERTRMNLISANLANANSTRTAEGGPYKRKDAVFAATQVGEGFRS 60

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                  +   GV+V  I  D +    ++DP HP A+A G V  PNVNV+ E ADM    
Sbjct: 61  ALDRMRKNAPQGVQVTGIVEDPNPPRLQYDPSHPDADAKGYVALPNVNVVEEMADMIAAT 120

Query: 109 RLYMANLQTIKQSHDMMTTTLDLL 132
           R Y AN+  ++ + +M   TL++ 
Sbjct: 121 RAYEANVTAMQAAKNMALKTLEIG 144


>gi|308173581|ref|YP_003920286.1| flagellar component of cell-proximal portion of basal-body rod
           [Bacillus amyloliquefaciens DSM 7]
 gi|307606445|emb|CBI42816.1| flagellar component of cell-proximal portion of basal-body rod
           [Bacillus amyloliquefaciens DSM 7]
 gi|328553487|gb|AEB23979.1| flagellar basal body rod protein FlgC [Bacillus amyloliquefaciens
           TA208]
 gi|328911722|gb|AEB63318.1| flagellar component of cell-proximal portion of basal-body rod
           [Bacillus amyloliquefaciens LL3]
          Length = 150

 Score =  106 bits (265), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 45/147 (30%), Positives = 67/147 (45%), Gaps = 18/147 (12%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGD---TPGSDPYRRKTISFEE-------- 53
             S +I+ S L  Q  RM ++S N+AN  TT          PYRRK +S +         
Sbjct: 4   FQSLNISGSALTAQRVRMDVVSSNLANMDTTRAKQVNGEWVPYRRKLVSLQSGGESFSSL 63

Query: 54  -------VMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
                  +     GV+V  +  D S F   +DP +P AN  G V+ PNV+ L E  D+  
Sbjct: 64  LNSKMNGIGSAGNGVKVSAVTEDPSAFNLVYDPENPDANKDGYVQKPNVDPLKEMVDLVS 123

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
           + R Y AN+  +  S  M+   L++ +
Sbjct: 124 STRSYEANVTALNASKGMLLKALEIGK 150


>gi|82702451|ref|YP_412017.1| flagellar basal-body rod protein FlgC [Nitrosospira multiformis
           ATCC 25196]
 gi|82410516|gb|ABB74625.1| flagellar basal-body rod protein FlgC [Nitrosospira multiformis
           ATCC 25196]
          Length = 139

 Score =  106 bits (265), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 38/139 (27%), Positives = 66/139 (47%), Gaps = 7/139 (5%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM------ 55
             L     +A S +  Q+ R+ +++ N+ANA +   + G     ++ +            
Sbjct: 1   MSLFNIFTVAGSAMTAQNQRLNVVASNLANADSAASSNGQPYKAKQVVFMSTSPLGDNGI 60

Query: 56  -HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
            +G+ GVRV  +  DQS     ++P HP+AN  G V  PNVNV+ E  DM   +R Y  N
Sbjct: 61  SNGTHGVRVSGVIEDQSPMKMVYEPSHPMANPEGFVTMPNVNVVEEMVDMISASRSYQNN 120

Query: 115 LQTIKQSHDMMTTTLDLLR 133
           +  +  +  ++  TL + +
Sbjct: 121 VDMMNTAKTLLLKTLTIGQ 139


>gi|292487937|ref|YP_003530812.1| flagellar basal-body rod protein FlgC [Erwinia amylovora CFBP1430]
 gi|292899156|ref|YP_003538525.1| flagellar basal-body rod protein [Erwinia amylovora ATCC 49946]
 gi|291199004|emb|CBJ46115.1| flagellar basal-body rod protein [Erwinia amylovora ATCC 49946]
 gi|291553359|emb|CBA20404.1| Flagellar basal-body rod protein flgC [Erwinia amylovora CFBP1430]
 gi|312172058|emb|CBX80315.1| Flagellar basal-body rod protein flgC [Erwinia amylovora ATCC
           BAA-2158]
          Length = 134

 Score =  106 bits (265), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 40/134 (29%), Positives = 69/134 (51%), Gaps = 2/134 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM--HGSG 59
             L +   IA S +A QS R+ + + N+ANA +     G     ++ +          +G
Sbjct: 1   MALTSIFDIAGSAMAAQSQRLNVSASNLANADSATGPDGQPYVAKQVVFQTNAAPGSPTG 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GVRV ++  D +     ++PG+P+A+A G +K PNV+V+ ET +    +R Y AN++ + 
Sbjct: 61  GVRVAEVIDDPTPAKLVYEPGNPMADARGYIKMPNVDVVAETVNSMSASRSYQANVEVLN 120

Query: 120 QSHDMMTTTLDLLR 133
               MM  TL + +
Sbjct: 121 TVKQMMMKTLTMGQ 134


>gi|255523706|ref|ZP_05390672.1| flagellar basal-body rod protein FlgC [Clostridium carboxidivorans
           P7]
 gi|296186710|ref|ZP_06855112.1| flagellar basal-body rod protein FlgC [Clostridium carboxidivorans
           P7]
 gi|255512575|gb|EET88849.1| flagellar basal-body rod protein FlgC [Clostridium carboxidivorans
           P7]
 gi|296048747|gb|EFG88179.1| flagellar basal-body rod protein FlgC [Clostridium carboxidivorans
           P7]
          Length = 144

 Score =  106 bits (265), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 47/144 (32%), Positives = 64/144 (44%), Gaps = 11/144 (7%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM----- 55
           M     +  I+ SGL+ +  RM  I+ NIAN  TT    G    R+  +  E +      
Sbjct: 1   MIKAFNNLRISASGLSAERLRMDTIASNIANVDTTRGANGQPYRRKIAVFQENLNTQLNK 60

Query: 56  ------HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNR 109
                     GV+   I  D+S     +DP +P A+A G V  PNVNVL E ADM    R
Sbjct: 61  QNGKYEQTPLGVKAVGIVDDESPLRRVYDPSNPDADAQGYVSKPNVNVLNEMADMMVATR 120

Query: 110 LYMANLQTIKQSHDMMTTTLDLLR 133
            Y AN+  I     M +  L++ R
Sbjct: 121 AYEANIDAISSEKTMFSKALEIGR 144


>gi|154253013|ref|YP_001413837.1| flagellar basal body rod protein FlgC [Parvibaculum lavamentivorans
           DS-1]
 gi|154156963|gb|ABS64180.1| flagellar basal-body rod protein FlgC [Parvibaculum lavamentivorans
           DS-1]
          Length = 139

 Score =  106 bits (265), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 61/135 (45%), Positives = 85/135 (62%), Gaps = 3/135 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             LI S  +A SGL  QS RM++I+ENIANA +T    G DPYRRK ++FE+ ++   G 
Sbjct: 4   MDLIKSMMVAASGLKAQSGRMRVIAENIANADSTSRVAGGDPYRRKIVTFEDKLNREIGA 63

Query: 62  RVKKI---GVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
               +    +D++ F  ++ PGHP A+ +G VK PNVN +VE  DMRE  R Y ANL  I
Sbjct: 64  NTVSLGRPVLDKTEFQLKYMPGHPAADEAGYVKMPNVNGMVEAMDMREAQRSYEANLNLI 123

Query: 119 KQSHDMMTTTLDLLR 133
           + S  M++ T+D+LR
Sbjct: 124 QASRRMISQTIDILR 138


>gi|299131775|ref|ZP_07024970.1| flagellar basal-body rod protein FlgC [Afipia sp. 1NLS2]
 gi|298591912|gb|EFI52112.1| flagellar basal-body rod protein FlgC [Afipia sp. 1NLS2]
          Length = 141

 Score =  106 bits (264), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 62/136 (45%), Positives = 82/136 (60%), Gaps = 4/136 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
              + S  IA SGL  Q+ RM++ISENIANA +T  T G DPYRRK  +F   +  +   
Sbjct: 5   MDFLKSMSIATSGLRAQAGRMRVISENIANADSTASTAGGDPYRRKVPTFSSTLDRTLDA 64

Query: 62  RVKKIG----VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           +V  +G       S+F  + +PG+P A+A+G VKYPNVN LVE  DMRE  R Y ANL  
Sbjct: 65  QVVSLGRVKTDTTSSFRIKHEPGNPAADANGNVKYPNVNSLVEMTDMREAQRSYEANLNI 124

Query: 118 IKQSHDMMTTTLDLLR 133
           I  +  M+  TLD+L+
Sbjct: 125 ISATRRMIQRTLDILK 140


>gi|291617018|ref|YP_003519760.1| FlgC [Pantoea ananatis LMG 20103]
 gi|291152048|gb|ADD76632.1| FlgC [Pantoea ananatis LMG 20103]
 gi|327393469|dbj|BAK10891.1| flagellar basal-body rod protein FlgC [Pantoea ananatis AJ13355]
          Length = 134

 Score =  106 bits (264), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 38/134 (28%), Positives = 67/134 (50%), Gaps = 2/134 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             L+    IA S +  QS R+ + + N+ANA +     G     ++ +   +   G+   
Sbjct: 1   MALLNIFDIAGSAMTAQSQRLNVSASNLANADSVTGPDGQPYVAKQVVFQTDAAAGAATG 60

Query: 62  --RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
             +V ++  D +     +DPG+P+A+A G VK PNV+V+ ET +    +R Y AN++ + 
Sbjct: 61  GVKVAQVVDDPTPAKLVYDPGNPMADAKGYVKMPNVDVVAETVNTMSASRSYQANVEVLN 120

Query: 120 QSHDMMTTTLDLLR 133
               MM  TL + +
Sbjct: 121 TVKSMMMKTLTMGQ 134


>gi|149195179|ref|ZP_01872270.1| flagellar basal-body rod protein C [Caminibacter mediatlanticus
           TB-2]
 gi|149134731|gb|EDM23216.1| flagellar basal-body rod protein C [Caminibacter mediatlanticus
           TB-2]
          Length = 165

 Score =  106 bits (264), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 52/165 (31%), Positives = 77/165 (46%), Gaps = 34/165 (20%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM------ 55
              + S  I+  GL+ Q  R+ IISENIANA TT  TP   PYRRK + F+ +       
Sbjct: 1   MAFLNSFDISGYGLSAQRFRINIISENIANANTTR-TPEGGPYRRKEVIFKAIPFEDILN 59

Query: 56  ---------------------------HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASG 88
                                           V V KI  D S  + +++P +P ANA G
Sbjct: 60  KEIENSANFHKYENPLDEEGEDYKVAKPPIETVIVDKIVRDDSKPILKYEPDNPDANADG 119

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            V YPN+N ++E AD+ E  R Y AN+   + + +M  + +++L+
Sbjct: 120 YVAYPNINPVIEMADLIEATRSYQANVAAFQSAKNMAQSAINILQ 164


>gi|58039961|ref|YP_191925.1| flagellar basal body rod protein FlgC [Gluconobacter oxydans 621H]
 gi|58002375|gb|AAW61269.1| Flagellar basal-body rod protein FlgC [Gluconobacter oxydans 621H]
          Length = 135

 Score =  106 bits (264), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 58/135 (42%), Positives = 81/135 (60%), Gaps = 3/135 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             L  +  I+ SG+  Q+ R++I++EN+AN  TTG  PG+DPYRRKTI+F E +    G 
Sbjct: 1   MNLSTTIGISASGMDAQAQRLRIVAENLANQDTTGSQPGADPYRRKTITFAEHVDDETGA 60

Query: 62  R---VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
               V+ +G D S F   +DP HP A+  G VK  NV+ + E  DMRE  R Y ANL  +
Sbjct: 61  STVDVQNVGQDMSDFDTRYDPSHPAADERGYVKVSNVDSMTEMMDMREAERSYEANLNAL 120

Query: 119 KQSHDMMTTTLDLLR 133
             +  M++ TLDLL+
Sbjct: 121 SSTRTMLSRTLDLLK 135


>gi|319764537|ref|YP_004128474.1| flagellar basal-body rod protein flgc [Alicycliphilus denitrificans
           BC]
 gi|330826753|ref|YP_004390056.1| flagellar basal-body rod protein FlgC [Alicycliphilus denitrificans
           K601]
 gi|317119098|gb|ADV01587.1| flagellar basal-body rod protein FlgC [Alicycliphilus denitrificans
           BC]
 gi|329312125|gb|AEB86540.1| flagellar basal-body rod protein FlgC [Alicycliphilus denitrificans
           K601]
          Length = 134

 Score =  106 bits (264), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 33/134 (24%), Positives = 62/134 (46%), Gaps = 2/134 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM--HGSG 59
             + +  +++ S ++ QS R+ +++ N+AN        G     R+ +     M    S 
Sbjct: 1   MSMFSIFNVSGSAISAQSQRLNVVASNLANVDAVAGPDGQAYKARQVVFQTAPMGPDSSA 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GVRV  I           DP +P+A+A G V + NVN + E  +M   +R Y  N++ + 
Sbjct: 61  GVRVSTIQESGVPGRRVHDPSNPMADAEGYVTHSNVNAVEEMVNMISASRSYQNNVEVMN 120

Query: 120 QSHDMMTTTLDLLR 133
            +  ++  TL + +
Sbjct: 121 TAKSLLLKTLQMGQ 134


>gi|253573516|ref|ZP_04850859.1| flagellar basal-body rod protein FlgC [Paenibacillus sp. oral taxon
           786 str. D14]
 gi|251847044|gb|EES75049.1| flagellar basal-body rod protein FlgC [Paenibacillus sp. oral taxon
           786 str. D14]
          Length = 149

 Score =  106 bits (264), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 50/149 (33%), Positives = 68/149 (45%), Gaps = 17/149 (11%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGD---TPGSDPYRRKTISFEEVMHG- 57
             +  S  I++S L  Q  RM +IS NIANA TT        + PYRRKT+         
Sbjct: 1   MNISDSFGISSSALTAQRLRMDVISSNIANAETTRAKIVDGKAVPYRRKTVVMAPKEMDF 60

Query: 58  -------------SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
                        S GV++ KI  D S     ++P HP A++ G V  PNV++L E  DM
Sbjct: 61  DSALNSVMGKEVSSQGVKITKIQEDPSPLKPVYNPTHPDADSEGYVYMPNVDILKEMVDM 120

Query: 105 RETNRLYMANLQTIKQSHDMMTTTLDLLR 133
               R Y AN+  +  S  M T  L + +
Sbjct: 121 ISATRSYEANVTALNASKAMFTKALQIGK 149


>gi|330720177|gb|EGG98566.1| Flagellar basal-body rod protein FlgC [gamma proteobacterium
           IMCC2047]
          Length = 150

 Score =  106 bits (264), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 40/150 (26%), Positives = 66/150 (44%), Gaps = 18/150 (12%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF---------- 51
             L     +A +G++ Q+ R+  ++ NIANA +   + G     R  +            
Sbjct: 1   MSLNNIFDVAGTGMSAQTIRLNTVASNIANAESVSSSTGETYRARHPVFSVIRDQVNQDM 60

Query: 52  --------EEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETAD 103
                      M    GV+V  I   Q+   +++ P HP A+ +G V YPNV+V+ E AD
Sbjct: 61  LGGGFNNNFNGMSAGYGVKVDGIVESQAELRQKYQPDHPSADENGYVYYPNVDVVTEMAD 120

Query: 104 MRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           M   +R Y  N++ +  +  MM   L L +
Sbjct: 121 MISASRAYQTNVEIMNTAKQMMQRVLTLGQ 150


>gi|90408058|ref|ZP_01216229.1| flagellar basal-body rod protein FlgC [Psychromonas sp. CNPT3]
 gi|90310815|gb|EAS38929.1| flagellar basal-body rod protein FlgC [Psychromonas sp. CNPT3]
          Length = 140

 Score =  106 bits (264), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 37/139 (26%), Positives = 62/139 (44%), Gaps = 7/139 (5%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-- 59
             L     I+ +G++ QS R+   + N+ANA +   +       R  +   E+    G  
Sbjct: 1   MSLFRILDISATGMSAQSVRLNTTASNLANANSVSSSSEKTYRARHPVFAAELNKAKGAL 60

Query: 60  -----GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
                GV+V  I    +    E+ P  P A+  G V + NVNV+ E A+M   +R Y  N
Sbjct: 61  SSSGVGVKVLGIVESDAPLAREYAPNSPSADKDGFVYHSNVNVMEEMANMISASRSYQTN 120

Query: 115 LQTIKQSHDMMTTTLDLLR 133
           +Q    +  M++ TL + +
Sbjct: 121 VQIADAAKQMLSRTLQMGK 139


>gi|209884536|ref|YP_002288393.1| flagellar basal-body rod protein FlgC [Oligotropha carboxidovorans
           OM5]
 gi|209872732|gb|ACI92528.1| flagellar basal-body rod protein FlgC [Oligotropha carboxidovorans
           OM5]
          Length = 141

 Score =  106 bits (264), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 62/136 (45%), Positives = 82/136 (60%), Gaps = 4/136 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
              + S  IA SGL  Q+ RM++ISENIANA +T  T G DPYRRK  +F   +  S   
Sbjct: 5   MDFLKSMSIATSGLRAQAGRMRVISENIANADSTAGTAGGDPYRRKVPTFVSALDRSLDA 64

Query: 62  RVKKIGVDQST----FVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           +V  +G  ++     F  + +PG+P A+A+G VKYPNVN LVE  DMRE  R Y ANL  
Sbjct: 65  QVVSLGRIKTDTASSFRIKHEPGNPAADANGNVKYPNVNSLVEMTDMREAQRSYEANLNI 124

Query: 118 IKQSHDMMTTTLDLLR 133
           I  +  M+  TLD+L+
Sbjct: 125 ISATRRMIQRTLDILK 140


>gi|323490140|ref|ZP_08095360.1| flagellar basal body rod protein FlgC [Planococcus donghaensis
           MPA1U2]
 gi|323396188|gb|EGA89014.1| flagellar basal body rod protein FlgC [Planococcus donghaensis
           MPA1U2]
          Length = 151

 Score =  106 bits (264), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 45/151 (29%), Positives = 63/151 (41%), Gaps = 19/151 (12%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGD---TPGSDPYRRKTISFEEVMHGS 58
             L    +I++SGL     RM ++S NIANA T           PYRRKT+   +     
Sbjct: 1   MSLFTGFNISSSGLTANRLRMDVVSANIANANTNRAELVDGEWMPYRRKTVELSQSGTSP 60

Query: 59  ----------------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETA 102
                            GV+   I  DQ+ F   +DP HP A   G V+  NV+ L E  
Sbjct: 61  FSNQLQSAINRGNTAVTGVKASGIKEDQTPFTLRYDPEHPDAGEDGYVRMSNVDPLQEMV 120

Query: 103 DMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           D+    R Y AN+  +  S  M    L++ +
Sbjct: 121 DLMSATRSYEANVTALNASKSMFMKALEIGK 151


>gi|258592507|emb|CBE68816.1| flagellar basal-body rod protein FlgC (cell-proximal rod protein)
           [NC10 bacterium 'Dutch sediment']
          Length = 140

 Score =  106 bits (264), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 46/140 (32%), Positives = 68/140 (48%), Gaps = 10/140 (7%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE----------E 53
           + AS  I  + LA Q  RM +I+EN+ANA  T    G    R+  +              
Sbjct: 1   MFASMEINATALAAQRVRMNLIAENLANAEVTRTPIGGPYRRKGVVLGTRGTSAFEGLLN 60

Query: 54  VMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
                GGV V KI   Q+     ++P HP A+ +G V  PN+N ++E  D+   +R Y A
Sbjct: 61  AGAAPGGVEVLKIVESQAPPNLVYNPSHPDADTAGYVAMPNINPVMEMVDLMSASRAYEA 120

Query: 114 NLQTIKQSHDMMTTTLDLLR 133
           N+  I+ +  MMT TL++ R
Sbjct: 121 NISAIQIAKSMMTKTLEIGR 140


>gi|237653585|ref|YP_002889899.1| flagellar basal-body rod protein FlgC [Thauera sp. MZ1T]
 gi|237624832|gb|ACR01522.1| flagellar basal-body rod protein FlgC [Thauera sp. MZ1T]
          Length = 134

 Score =  106 bits (264), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 35/134 (26%), Positives = 62/134 (46%), Gaps = 2/134 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-- 59
             ++    IA S L  QS R+   + N+ANA +     G     ++ +     + G    
Sbjct: 1   MSMLNVFQIAGSALNAQSLRLNATASNLANADSVISEDGQPYRAKQVVFAARPVAGPAAV 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GV+V ++    +     F+P +P AN  G V+ PNVNV+ E  +M   +R Y  N + + 
Sbjct: 61  GVQVTQVVESAAPLRLVFEPNNPAANPDGYVEMPNVNVVEEMVNMISASRSYQNNAEVMS 120

Query: 120 QSHDMMTTTLDLLR 133
            +  ++  TL + +
Sbjct: 121 TARTLLQRTLQIGQ 134


>gi|197104391|ref|YP_002129768.1| flagellar basal-body rod protein FlgC [Phenylobacterium zucineum
           HLK1]
 gi|196477811|gb|ACG77339.1| flagellar basal-body rod protein FlgC [Phenylobacterium zucineum
           HLK1]
          Length = 138

 Score =  106 bits (264), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 67/126 (53%), Positives = 81/126 (64%), Gaps = 2/126 (1%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE--VMHGSGGVRVKKIG 67
           IA S L  Q ARM+II+EN+ANA +T   PG DPYRR+   FE   V   + GVR+ ++ 
Sbjct: 12  IAASALRAQQARMRIIAENLANANSTAKVPGGDPYRRQAPVFEPTRVAGAAQGVRMSRVE 71

Query: 68  VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
            DQS F  E+DPGHP A+  G VK PNVN LVE  DMRE  R Y ANL  I+ +  M T 
Sbjct: 72  PDQSAFRMEYDPGHPSADDRGYVKLPNVNSLVEAMDMREAQRAYEANLNVIETARAMETR 131

Query: 128 TLDLLR 133
           TLDLL+
Sbjct: 132 TLDLLK 137


>gi|311068140|ref|YP_003973063.1| flagellar basal body rod protein FlgC [Bacillus atrophaeus 1942]
 gi|310868657|gb|ADP32132.1| flagellar basal body rod protein FlgC [Bacillus atrophaeus 1942]
          Length = 149

 Score =  106 bits (264), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 45/146 (30%), Positives = 66/146 (45%), Gaps = 17/146 (11%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTP---GSDPYRRKTIS----------- 50
             S +++ S L  Q  RM ++S N+AN  TT          PYRRK +S           
Sbjct: 4   FQSLNVSGSALTAQRVRMDVVSSNLANMDTTRAKQVDGEWVPYRRKLVSLQSNGESFSSI 63

Query: 51  ---FEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                       GV+V K+  D S F   +DP +P AN  G V+ PNV+ L E  D+  +
Sbjct: 64  LHSRMSSGDAGNGVKVTKVTEDDSDFNLVYDPTNPDANEEGYVQKPNVDPLKEMVDLVSS 123

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y AN+  +  S  M+   L++ +
Sbjct: 124 TRSYEANVTAMNASKGMLLKALEIGK 149


>gi|302384099|ref|YP_003819922.1| flagellar basal-body rod protein FlgC [Brevundimonas subvibrioides
           ATCC 15264]
 gi|302194727|gb|ADL02299.1| flagellar basal-body rod protein FlgC [Brevundimonas subvibrioides
           ATCC 15264]
          Length = 144

 Score =  106 bits (264), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 57/129 (44%), Positives = 81/129 (62%), Gaps = 1/129 (0%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRK-TISFEEVMHGSGGVRVK 64
           ++  +A S L  Q +RM+II+ENIANA +T  T G  PYRR+  +     + G+ GV + 
Sbjct: 15  SAMAVAASALTAQQSRMRIIAENIANAESTARTAGGQPYRRQIPVFEARQIDGATGVSLA 74

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           ++  DQS F  E+DP HP A+A G V  PNV+ L+E+ DMRE  R Y ANL  I+ +  M
Sbjct: 75  EVRPDQSDFRREYDPSHPAADADGYVLRPNVDSLIESMDMREAQRAYEANLNVIETARTM 134

Query: 125 MTTTLDLLR 133
            + TLD+L+
Sbjct: 135 ESRTLDILK 143


>gi|149911704|ref|ZP_01900312.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
           [Moritella sp. PE36]
 gi|149805234|gb|EDM65251.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
           [Moritella sp. PE36]
          Length = 140

 Score =  106 bits (264), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 42/138 (30%), Positives = 66/138 (47%), Gaps = 6/138 (4%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV------M 55
             L     IA S ++ QS R+   + N+ANA +   + G     R  I   ++       
Sbjct: 1   MSLFRVFDIAGSAMSAQSVRLNTTASNLANANSVSSSAGETYKARYPIFQAQLDQANFSQ 60

Query: 56  HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
           + + GV V  I    +  V EF+P HP+A+ +G V  PNVN++ E A+M   +R Y  N+
Sbjct: 61  NEAVGVNVAGIVESDAPLVNEFNPNHPLADENGYVYRPNVNIMEEMANMISASRSYQTNV 120

Query: 116 QTIKQSHDMMTTTLDLLR 133
           Q    +  M+  TL L +
Sbjct: 121 QIADAAKKMLNKTLALGQ 138


>gi|150390489|ref|YP_001320538.1| flagellar basal-body rod protein FlgC [Alkaliphilus metalliredigens
           QYMF]
 gi|149950351|gb|ABR48879.1| flagellar basal-body rod protein FlgC [Alkaliphilus metalliredigens
           QYMF]
          Length = 147

 Score =  106 bits (263), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 46/147 (31%), Positives = 65/147 (44%), Gaps = 15/147 (10%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR--------------- 46
                + + + SGL  +  RM  IS+NIANA TT    GS   R+               
Sbjct: 1   MSYFNAINTSASGLTAERFRMDTISKNIANANTTRTPNGSPYKRQVVLFQSKEDAKGFSS 60

Query: 47  KTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
           +           GGV V  +  D S + + +DPGHP AN  G V  PNV+++VE A+M  
Sbjct: 61  QLERIMNNNEKPGGVEVVGVKNDSSPYRQVYDPGHPDANEEGYVLMPNVDIVVEMANMIS 120

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
             R Y AN   +  +  M    L++ R
Sbjct: 121 ATRAYEANTTALNATKSMAMKALEIGR 147


>gi|326796599|ref|YP_004314419.1| flagellar basal-body rod protein FlgC [Marinomonas mediterranea
           MMB-1]
 gi|326547363|gb|ADZ92583.1| flagellar basal-body rod protein FlgC [Marinomonas mediterranea
           MMB-1]
          Length = 149

 Score =  106 bits (263), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 37/149 (24%), Positives = 63/149 (42%), Gaps = 16/149 (10%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV------- 54
             L     I+ S ++ Q+ R+  ++ NIAN  +   +       RK +  E +       
Sbjct: 1   MSLNNIFAISGSAMSAQTIRLNTVASNIANVDSVASSVDETYRARKPVFAEMMEESMRER 60

Query: 55  ---------MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
                    +    GV+V  I    +     ++P HP++N  G V YPNVN + E ADM 
Sbjct: 61  GWRDVSDDDLQSGVGVQVAGIVESDAPLQPRYEPDHPMSNEEGYVFYPNVNPVEEMADMM 120

Query: 106 ETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
             +R +  N++ +  +  MM   L L + 
Sbjct: 121 SASRSFQTNVEVMNSAKSMMQKMLSLGQS 149


>gi|310641541|ref|YP_003946299.1| flagellar basal-body rod protein flgc [Paenibacillus polymyxa SC2]
 gi|309246491|gb|ADO56058.1| Flagellar basal-body rod protein FlgC [Paenibacillus polymyxa SC2]
          Length = 150

 Score =  106 bits (263), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 50/150 (33%), Positives = 70/150 (46%), Gaps = 18/150 (12%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSD---PYRRKTISFEEVMH-- 56
             +     I+ S L  Q  RM +IS NIANA TT     +    PYRRKT+  E      
Sbjct: 1   MKINNGFDISASALTAQRLRMDVISSNIANAETTRAKVENGQAIPYRRKTVVLEPNQSGF 60

Query: 57  -------------GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETAD 103
                         + GV+V +I  DQS     ++PGHP A+  G V  PNV+++ E  D
Sbjct: 61  ADVLKAQMEGSSTSAAGVKVSQIQEDQSPLKPVYNPGHPDADKDGYVYMPNVDIMKEMVD 120

Query: 104 MRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           M    R Y AN+  +  S  M++  L++ R
Sbjct: 121 MISATRSYEANVTALNASKAMVSKALEIGR 150


>gi|308068650|ref|YP_003870255.1| flagellar basal-body rod protein flgC [Paenibacillus polymyxa E681]
 gi|305857929|gb|ADM69717.1| Flagellar basal-body rod protein flgC [Paenibacillus polymyxa E681]
          Length = 150

 Score =  106 bits (263), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 50/150 (33%), Positives = 70/150 (46%), Gaps = 18/150 (12%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSD---PYRRKTISFEEVMH-- 56
             +     I+ S L  Q  RM +IS NIANA TT     +    PYRRKT+  E      
Sbjct: 1   MKINNGFDISASALTAQRLRMDVISSNIANAETTRAKVENGQAVPYRRKTVVLEPNQSGF 60

Query: 57  -------------GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETAD 103
                         + GV+V +I  DQS     ++PGHP A+  G V  PNV+++ E  D
Sbjct: 61  ADVLKAQMEGSSTSAAGVKVSQIQEDQSPLKPVYNPGHPDADKDGYVYMPNVDIMKEMVD 120

Query: 104 MRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           M    R Y AN+  +  S  M++  L++ R
Sbjct: 121 MISATRSYEANVTALNASKAMVSKALEIGR 150


>gi|332296506|ref|YP_004438429.1| flagellar basal-body rod protein FlgC [Thermodesulfobium narugense
           DSM 14796]
 gi|332179609|gb|AEE15298.1| flagellar basal-body rod protein FlgC [Thermodesulfobium narugense
           DSM 14796]
          Length = 134

 Score =  106 bits (263), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 44/133 (33%), Positives = 68/133 (51%), Gaps = 3/133 (2%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---G 60
            + +  IA SGL  Q  +M + + N+ANA +         ++R+ +  +E     G   G
Sbjct: 2   FLRTLEIAGSGLTAQRLKMDVAANNLANAYSNVKDKNGQIFKRQIVELQESTGKDGSFLG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V+V  I  D S     +DPG+P ANA G V+YPNVN + E   +   +R Y A+L  +  
Sbjct: 62  VKVAGIISDNSPPRMVYDPGNPEANADGYVEYPNVNPIREMVSLINASRSYEADLNVVSA 121

Query: 121 SHDMMTTTLDLLR 133
           +  M+  TLD L+
Sbjct: 122 TKSMIGQTLDELK 134


>gi|115523571|ref|YP_780482.1| flagellar basal body rod protein FlgC [Rhodopseudomonas palustris
           BisA53]
 gi|115517518|gb|ABJ05502.1| flagellar basal-body rod protein FlgC [Rhodopseudomonas palustris
           BisA53]
          Length = 141

 Score =  106 bits (263), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 59/135 (43%), Positives = 82/135 (60%), Gaps = 3/135 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
                S  IA SGL  Q+ RM++I+ENIANA++T  T G DPYRRK  +F   +  +   
Sbjct: 6   MDFSRSMAIATSGLRAQAGRMRVIAENIANAQSTAQTAGGDPYRRKVPTFTTALDRALDA 65

Query: 62  RVK---KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
           RV    ++  D S F  +++P +P A+A+G VKYPNVN L+E  DMR+  R Y ANL  I
Sbjct: 66  RVVALGRVKPDTSPFQIKYEPSNPAADAAGNVKYPNVNPLIEMTDMRDAQRSYEANLNII 125

Query: 119 KQSHDMMTTTLDLLR 133
             +  M+  TLD+L+
Sbjct: 126 SATRRMVQRTLDILK 140


>gi|27380924|ref|NP_772453.1| flagellar basal body rod protein FlgC [Bradyrhizobium japonicum
           USDA 110]
 gi|27354090|dbj|BAC51078.1| flagellar basal-body rod protein [Bradyrhizobium japonicum USDA
           110]
          Length = 141

 Score =  106 bits (263), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 61/136 (44%), Positives = 82/136 (60%), Gaps = 3/136 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
                S  IA SGL  Q+ RM++ISENIANA +T  T G DPYRRK  +F   +  +   
Sbjct: 6   SDFARSMAIATSGLRAQAGRMRVISENIANADSTSQTAGGDPYRRKVPTFSSALDRTLDA 65

Query: 62  RVK---KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
           +V    +I  DQS F  +++P +P A+A+G VKYPNVN +VE  DMR+  R Y ANL  I
Sbjct: 66  QVVTLGRIKPDQSNFRTKYEPNNPAADATGNVKYPNVNSVVEMTDMRDAQRSYEANLNII 125

Query: 119 KQSHDMMTTTLDLLRD 134
             +  M+  TLD+L+ 
Sbjct: 126 SATRRMIQRTLDILKS 141


>gi|317121813|ref|YP_004101816.1| flagellar basal-body rod protein FlgC [Thermaerobacter marianensis
           DSM 12885]
 gi|315591793|gb|ADU51089.1| flagellar basal-body rod protein FlgC [Thermaerobacter marianensis
           DSM 12885]
          Length = 179

 Score =  106 bits (263), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 41/173 (23%), Positives = 61/173 (35%), Gaps = 44/173 (25%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS------ 58
             +  IA SG+  Q  R+ +I+ N+AN  TT    G    R   +  E V   +      
Sbjct: 6   FNTFDIAASGMTAQRLRLDLIASNLANVDTTRTAQGGPYRRLVPVFQERVRPFAEVLRER 65

Query: 59  --------------------------------------GGVRVKKIGVDQSTFVEEFDPG 80
                                                  GV+V  +  D S     +DPG
Sbjct: 66  AAGFGGMSGSAGGVSGAAGWQTGGPAGGAGPALGGPALAGVQVAAVVADPSPPRLVYDPG 125

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           HP A   G V YPNV+ L+E  ++    R Y AN+     +  +    L++ R
Sbjct: 126 HPDAGPDGYVAYPNVDPLMEMVNLLAATRAYEANVAVFSAARTLALRALEIGR 178


>gi|294500941|ref|YP_003564641.1| flagellar basal-body rod protein FlgC [Bacillus megaterium QM
           B1551]
 gi|294350878|gb|ADE71207.1| flagellar basal-body rod protein FlgC [Bacillus megaterium QM
           B1551]
          Length = 149

 Score =  106 bits (263), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 43/149 (28%), Positives = 68/149 (45%), Gaps = 17/149 (11%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDT---PGSDPYRRKTISFEEV---- 54
             +  + +I +S L     RM ++S N+ANA TT  T       PY+RK +  +      
Sbjct: 1   MTIFRNMNITSSALTANRLRMDVVSSNMANAETTRGTYVNGEWQPYKRKMVVIQSDRSPS 60

Query: 55  ----------MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
                      + + GV+V  I  D + F   ++P HP AN  G VK PNV+ L E  D+
Sbjct: 61  FSSLLHSEINKNQNNGVKVTDIVEDNTPFNLVYNPTHPDANDQGYVKMPNVDPLKEMTDL 120

Query: 105 RETNRLYMANLQTIKQSHDMMTTTLDLLR 133
               R Y AN+     +  ++T  L++ +
Sbjct: 121 ISATRSYEANVTVFNTNKSILTKALEIGK 149


>gi|323495379|ref|ZP_08100456.1| flagellar basal body rod protein FlgC [Vibrio brasiliensis LMG
           20546]
 gi|323310302|gb|EGA63489.1| flagellar basal body rod protein FlgC [Vibrio brasiliensis LMG
           20546]
          Length = 138

 Score =  106 bits (263), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 37/138 (26%), Positives = 60/138 (43%), Gaps = 6/138 (4%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             L    ++  S ++ +S R+   S N+ANA +   +       R  +   E+     G 
Sbjct: 1   MSLFNVFNVTGSAMSAESVRLNTTSSNLANADSISSSAKDTYKARHAVFGAELSKAKYGR 60

Query: 62  ------RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
                 +V  I         E++P HP+AN  G +  PNVNV+ E A+M   +R Y  N+
Sbjct: 61  DHTVPVKVLGIVESDKPLNAEYNPDHPLANDEGYIYKPNVNVMEEMANMISASRSYQTNV 120

Query: 116 QTIKQSHDMMTTTLDLLR 133
           Q    S  M+  TL + +
Sbjct: 121 QLADASKQMLLRTLQMGQ 138


>gi|266621920|ref|ZP_06114855.1| flagellar basal-body rod protein FlgC [Clostridium hathewayi DSM
           13479]
 gi|288866393|gb|EFC98691.1| flagellar basal-body rod protein FlgC [Clostridium hathewayi DSM
           13479]
          Length = 144

 Score =  106 bits (263), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 41/144 (28%), Positives = 61/144 (42%), Gaps = 12/144 (8%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG---- 57
              + S +I  S L  +  R  II +N+AN  TT    G    R++    E  +      
Sbjct: 1   MGYLDSLNITGSALTAERFRTDIILQNLANQNTTRTAEGGPYRRKQVALRENQLDFKSEL 60

Query: 58  --------SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNR 109
                    GGV V+++   Q+  V  +DP HP AN  G V  PNVN   E  D+    R
Sbjct: 61  GKAMTKADRGGVYVEEVVESQNPLVPVYDPDHPDANEDGYVMMPNVNSAEEMVDLMAATR 120

Query: 110 LYMANLQTIKQSHDMMTTTLDLLR 133
            Y AN+  +  +  M    L++ +
Sbjct: 121 AYEANVTALNIAKSMALKALEIGK 144


>gi|188590422|ref|YP_001920200.1| flagellar basal body rod protein FlgC [Clostridium botulinum E3
           str. Alaska E43]
 gi|188500703|gb|ACD53839.1| flagellar basal-body rod protein FlgC [Clostridium botulinum E3
           str. Alaska E43]
          Length = 135

 Score =  106 bits (263), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 47/135 (34%), Positives = 73/135 (54%), Gaps = 3/135 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--- 58
                S  I+ +G++ +  RM  I+ N+ NA TT    GS PY RK   F+E +  +   
Sbjct: 1   MNAFTSMQISATGISAERLRMDTITSNMTNASTTRSADGSGPYVRKIAVFQEALDENRKM 60

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
            G++  KI  D+S   + ++P HP A+ +G V  PNVNVL E ADM  + R Y AN++T+
Sbjct: 61  AGIKPAKIVEDKSPLRKVYNPTHPDADETGYVTMPNVNVLNEMADMMVSTRSYEANVETL 120

Query: 119 KQSHDMMTTTLDLLR 133
                M +  L++ +
Sbjct: 121 NALKGMFSKALEIGK 135


>gi|83747656|ref|ZP_00944692.1| FlgC [Ralstonia solanacearum UW551]
 gi|300696911|ref|YP_003747572.1| FlgC: flagellar basal-body rod protein [Ralstonia solanacearum
           CFBP2957]
 gi|83725708|gb|EAP72850.1| FlgC [Ralstonia solanacearum UW551]
 gi|299073635|emb|CBJ53155.1| FlgC: Flagellar basal-body rod protein [Ralstonia solanacearum
           CFBP2957]
          Length = 135

 Score =  106 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 38/135 (28%), Positives = 62/135 (45%), Gaps = 3/135 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV--MHGSG 59
             L     +A S L  QS RM +++ N+ANA +     G+    ++ +   E      + 
Sbjct: 1   MSLFKVMDVAGSALTAQSKRMNVVASNLANAESVTGPDGTAYRAKQVVFSPEQGTDGYAT 60

Query: 60  GVRVKKIGVDQ-STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
           GV V  +  D  +       PG+P+A+A G V  PNV+V+ E  +M   +R Y AN++  
Sbjct: 61  GVSVDGVVEDTVTPMKRMHQPGNPLADADGYVTMPNVDVVDEMVNMISASRSYQANVEVA 120

Query: 119 KQSHDMMTTTLDLLR 133
             +  M    L L +
Sbjct: 121 NTTKTMAAKALTLGQ 135


>gi|168180911|ref|ZP_02615575.1| flagellar basal-body rod protein FlgC [Clostridium botulinum NCTC
           2916]
 gi|182668190|gb|EDT80169.1| flagellar basal-body rod protein FlgC [Clostridium botulinum NCTC
           2916]
          Length = 144

 Score =  105 bits (262), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 45/144 (31%), Positives = 61/144 (42%), Gaps = 11/144 (7%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR-----------KTI 49
           M     +  I+ SGL+ +  RM  I+ NIANA TT    G    R+              
Sbjct: 1   MIKAFDTMRISASGLSAERLRMDTIASNIANATTTRTENGGPYKRKIAVFEENLNNELNK 60

Query: 50  SFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNR 109
                     GV+   I  D S   + +DP HP A+  G V  PNVNVL E ADM  + R
Sbjct: 61  KNGATEKKLYGVKATGIVEDPSPVRKMYDPSHPDADEEGYVSMPNVNVLNEMADMMASVR 120

Query: 110 LYMANLQTIKQSHDMMTTTLDLLR 133
            Y AN+  +     M    L++ +
Sbjct: 121 TYEANVTVMNAEKSMFGKALEIGK 144


>gi|253702510|ref|YP_003023699.1| flagellar basal-body rod protein FlgC [Geobacter sp. M21]
 gi|251777360|gb|ACT19941.1| flagellar basal-body rod protein FlgC [Geobacter sp. M21]
          Length = 145

 Score =  105 bits (262), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 43/145 (29%), Positives = 66/145 (45%), Gaps = 13/145 (8%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
                S  I+ + LA +  RM +IS N+AN  +T    G    R+  +     +      
Sbjct: 1   MDFFTSMDISATALAAERTRMNLISSNLANVNSTRTAEGGPYRRKDAVFTATPLKEGASF 60

Query: 62  -------------RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                        +V +I  DQ     +++P HP A+ +G V YPN+NV+ E ADM   +
Sbjct: 61  GAALSKAAGARSVQVTQINEDQRPPRLQYEPSHPDADPNGYVAYPNINVVEEMADMITAS 120

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R Y AN+   + S  M   TL+L+R
Sbjct: 121 RSYEANITATQASKSMALKTLELMR 145


>gi|158320510|ref|YP_001513017.1| flagellar basal-body rod protein FlgC [Alkaliphilus oremlandii
           OhILAs]
 gi|158140709|gb|ABW19021.1| flagellar basal-body rod protein FlgC [Alkaliphilus oremlandii
           OhILAs]
          Length = 147

 Score =  105 bits (262), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 43/147 (29%), Positives = 71/147 (48%), Gaps = 15/147 (10%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--- 58
             +  S +I+ SGL  +  RM I ++NIANA TT  + G+   R+  +   +        
Sbjct: 1   MSIFNSLNISASGLTAERLRMDIATKNIANANTTRTSNGTPYRRQVVVFKTKDAPTPFSE 60

Query: 59  ------------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
                        GV V  I  D + +   ++PGHP A+ +G VK PNV+++ E A+M  
Sbjct: 61  HLKRSGGSPSKMNGVEVSSIQNDTAPYKSVYEPGHPDADENGYVKMPNVDIMTEMANMIS 120

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
            +R Y AN+  +  +  M   TL++ +
Sbjct: 121 ASRAYEANITAMNGTKSMFLKTLEIGK 147


>gi|153213630|ref|ZP_01948903.1| flagellar basal-body rod protein FlgC [Vibrio cholerae 1587]
 gi|153825350|ref|ZP_01978017.1| flagellar basal-body rod protein FlgC [Vibrio cholerae MZO-2]
 gi|153829337|ref|ZP_01982004.1| flagellar basal-body rod protein FlgC [Vibrio cholerae 623-39]
 gi|183179563|ref|ZP_02957774.1| flagellar basal-body rod protein FlgC [Vibrio cholerae MZO-3]
 gi|229513843|ref|ZP_04403305.1| flagellar basal-body rod protein FlgC [Vibrio cholerae TMA 21]
 gi|229522148|ref|ZP_04411565.1| flagellar basal-body rod protein FlgC [Vibrio cholerae TM 11079-80]
 gi|229524194|ref|ZP_04413599.1| flagellar basal-body rod protein FlgC [Vibrio cholerae bv. albensis
           VL426]
 gi|229528796|ref|ZP_04418186.1| flagellar basal-body rod protein FlgC [Vibrio cholerae 12129(1)]
 gi|254286492|ref|ZP_04961449.1| flagellar basal-body rod protein FlgC [Vibrio cholerae AM-19226]
 gi|258621047|ref|ZP_05716081.1| Flagellar basal-body rod protein flgC [Vibrio mimicus VM573]
 gi|258625275|ref|ZP_05720183.1| Flagellar basal-body rod protein flgC [Vibrio mimicus VM603]
 gi|261211324|ref|ZP_05925612.1| flagellar basal-body rod protein FlgC [Vibrio sp. RC341]
 gi|262170823|ref|ZP_06038501.1| flagellar basal-body rod protein FlgC [Vibrio mimicus MB-451]
 gi|262191691|ref|ZP_06049867.1| flagellar basal-body rod protein FlgC [Vibrio cholerae CT 5369-93]
 gi|297580845|ref|ZP_06942770.1| flagellar basal-body rod protein FlgC [Vibrio cholerae RC385]
 gi|124115829|gb|EAY34649.1| flagellar basal-body rod protein FlgC [Vibrio cholerae 1587]
 gi|148875178|gb|EDL73313.1| flagellar basal-body rod protein FlgC [Vibrio cholerae 623-39]
 gi|149741034|gb|EDM55103.1| flagellar basal-body rod protein FlgC [Vibrio cholerae MZO-2]
 gi|150423441|gb|EDN15385.1| flagellar basal-body rod protein FlgC [Vibrio cholerae AM-19226]
 gi|183012974|gb|EDT88274.1| flagellar basal-body rod protein FlgC [Vibrio cholerae MZO-3]
 gi|229332570|gb|EEN98056.1| flagellar basal-body rod protein FlgC [Vibrio cholerae 12129(1)]
 gi|229337775|gb|EEO02792.1| flagellar basal-body rod protein FlgC [Vibrio cholerae bv. albensis
           VL426]
 gi|229341073|gb|EEO06078.1| flagellar basal-body rod protein FlgC [Vibrio cholerae TM 11079-80]
 gi|229349024|gb|EEO13981.1| flagellar basal-body rod protein FlgC [Vibrio cholerae TMA 21]
 gi|258582448|gb|EEW07289.1| Flagellar basal-body rod protein flgC [Vibrio mimicus VM603]
 gi|258586435|gb|EEW11150.1| Flagellar basal-body rod protein flgC [Vibrio mimicus VM573]
 gi|260839279|gb|EEX65905.1| flagellar basal-body rod protein FlgC [Vibrio sp. RC341]
 gi|261891899|gb|EEY37885.1| flagellar basal-body rod protein FlgC [Vibrio mimicus MB-451]
 gi|262032430|gb|EEY50992.1| flagellar basal-body rod protein FlgC [Vibrio cholerae CT 5369-93]
 gi|297534671|gb|EFH73507.1| flagellar basal-body rod protein FlgC [Vibrio cholerae RC385]
 gi|327484718|gb|AEA79125.1| Flagellar basal-body rod protein FlgC [Vibrio cholerae LMA3894-4]
          Length = 138

 Score =  105 bits (262), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 39/138 (28%), Positives = 63/138 (45%), Gaps = 6/138 (4%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM------ 55
             L +  ++  S ++ +S R+   S N+ANA +   +       R  +   E+       
Sbjct: 1   MSLFSVFNVTGSAMSAESVRLNTTSSNLANADSISSSAKDTYKARHAVFGAELSKARFNR 60

Query: 56  HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
             +  V+V  I       V EF+P HP+AN  G +  PNVNV+ E A+M   +R Y  N+
Sbjct: 61  DPNVPVKVLGIVESDKPLVAEFNPEHPLANDEGYIYKPNVNVMEEMANMISASRSYQTNV 120

Query: 116 QTIKQSHDMMTTTLDLLR 133
           Q    S  M+  TL + +
Sbjct: 121 QVADASKQMLLRTLQMGQ 138


>gi|253998490|ref|YP_003050553.1| flagellar basal-body rod protein FlgC [Methylovorus sp. SIP3-4]
 gi|313200565|ref|YP_004039223.1| flagellar basal-body rod protein flgc [Methylovorus sp. MP688]
 gi|253985169|gb|ACT50026.1| flagellar basal-body rod protein FlgC [Methylovorus sp. SIP3-4]
 gi|312439881|gb|ADQ83987.1| flagellar basal-body rod protein FlgC [Methylovorus sp. MP688]
          Length = 134

 Score =  105 bits (262), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 38/134 (28%), Positives = 67/134 (50%), Gaps = 2/134 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-- 59
             L    +++ S ++ QS R+  ++ N+ANA +     G     ++ +      + +   
Sbjct: 1   MSLFNVFNVSGSAMSAQSQRLNAVASNLANADSATSANGQPYKAKQVVFSATPTNNAAVS 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GV+V+++  D S     +DP HP ANA G V  PNVNV  E  +M   +R Y  N++T+ 
Sbjct: 61  GVKVQQVIEDPSPPKVVYDPKHPAANAQGYVTMPNVNVTEEMVNMISASRAYQNNVETMN 120

Query: 120 QSHDMMTTTLDLLR 133
            +  M+  TL + +
Sbjct: 121 AAKTMLLKTLTIGQ 134


>gi|309779445|ref|ZP_07674206.1| flagellar basal-body rod protein FlgC [Ralstonia sp. 5_7_47FAA]
 gi|308921686|gb|EFP67322.1| flagellar basal-body rod protein FlgC [Ralstonia sp. 5_7_47FAA]
          Length = 135

 Score =  105 bits (262), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 37/135 (27%), Positives = 62/135 (45%), Gaps = 3/135 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV--MHGSG 59
             L     +A S L  QS RM +++ N+ANA +     G     ++ +          + 
Sbjct: 1   MSLFKVMDVAGSALTAQSKRMNVVASNLANAESVTGPDGKAYRAKQVVFSPAQESDDYAT 60

Query: 60  GVRVKKIGVDQ-STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
           GV V ++  D  +       PG+P+A+A G V  PNV+V+ E  +M   +R Y AN++  
Sbjct: 61  GVSVDRVVEDTVTPMKRMHQPGNPLADADGYVTMPNVDVVDEMVNMISASRSYQANVEVA 120

Query: 119 KQSHDMMTTTLDLLR 133
             +  M +  L L +
Sbjct: 121 NTTKTMASKALTLGQ 135


>gi|192362305|ref|YP_001982402.1| flagellar basal body rod protein FlgC [Cellvibrio japonicus
           Ueda107]
 gi|190688470|gb|ACE86148.1| flagellar basal-body rod protein FlgC [Cellvibrio japonicus
           Ueda107]
          Length = 148

 Score =  105 bits (262), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 37/148 (25%), Positives = 65/148 (43%), Gaps = 16/148 (10%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS----------- 50
             L     IA +G+  QS R+   + N+ANA++   +       R+ +            
Sbjct: 1   MALGTIFDIAGTGMNAQSLRLNTTASNLANAQSASSSVDEVYRSRQPVFAAIAQQAMGNL 60

Query: 51  -----FEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
                 +  +  + GV+V  I    +     ++PGHP A+A G V YPNVN + E A+M 
Sbjct: 61  NGAGYSQNELDANAGVQVLGIVESDAPLQRRYEPGHPKADADGYVFYPNVNPVEEMANMI 120

Query: 106 ETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             +R +  N++ +  +  M+   L L +
Sbjct: 121 SASRSFQMNVEVMNSAKQMVQRVLTLGQ 148


>gi|205373369|ref|ZP_03226173.1| flagellar basal body rod protein FlgC [Bacillus coahuilensis m4-4]
          Length = 149

 Score =  105 bits (262), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 48/149 (32%), Positives = 71/149 (47%), Gaps = 17/149 (11%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGD---TPGSDPYRRKTISFEEVMHGS 58
             +  S +I+ S L  Q  RM +IS N+ANA TT          PY RK++  +E     
Sbjct: 1   MSIFQSINISTSALTAQRLRMDVISSNVANADTTRGEYVNGEWQPYTRKSVVLQENQGNF 60

Query: 59  G-------------GVRVKKIGVD-QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
                         GV VK+I  D ++ F   FDP HP A+A G VK PNV+ L E  D+
Sbjct: 61  SSLLNQAKNTGSVNGVVVKEIKEDTETPFNLVFDPTHPDADAEGYVKMPNVDPLREMTDL 120

Query: 105 RETNRLYMANLQTIKQSHDMMTTTLDLLR 133
               R Y AN+  +  +  ++  +L++ +
Sbjct: 121 ISATRSYEANVTVMNANKALLMKSLEIGK 149


>gi|46578731|ref|YP_009539.1| flagellar basal-body rod protein FlgC [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120603705|ref|YP_968105.1| flagellar basal-body rod protein FlgC [Desulfovibrio vulgaris DP4]
 gi|46448143|gb|AAS94798.1| flagellar basal-body rod protein FlgC [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120563934|gb|ABM29678.1| flagellar basal-body rod protein FlgC [Desulfovibrio vulgaris DP4]
 gi|311232603|gb|ADP85457.1| flagellar basal-body rod protein FlgC [Desulfovibrio vulgaris RCH1]
          Length = 145

 Score =  105 bits (262), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 48/146 (32%), Positives = 70/146 (47%), Gaps = 14/146 (9%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-- 58
           MD++  +  I  S L  +   M IIS N+ANA+TT    G    R+ TI     + G   
Sbjct: 1   MDFMT-ALDIGASALTAERTNMNIISMNLANAKTTRTAEGGPYRRKTTIMAATEVDGPFS 59

Query: 59  -----------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                       GVRV  +  DQ  F   ++PGHP A+  G V YP++NV+ E A++   
Sbjct: 60  KQMESALDRELRGVRVMNVVRDQRPFKRVYEPGHPDADQQGFVSYPDINVVEEMANLMTA 119

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y AN+ T+     M +  L++ R
Sbjct: 120 QRGYEANVTTVDTVKAMYSKALEIGR 145


>gi|332297607|ref|YP_004439529.1| flagellar basal-body rod protein FlgC [Treponema brennaborense DSM
           12168]
 gi|332180710|gb|AEE16398.1| flagellar basal-body rod protein FlgC [Treponema brennaborense DSM
           12168]
          Length = 151

 Score =  105 bits (262), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 48/151 (31%), Positives = 72/151 (47%), Gaps = 19/151 (12%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG---- 57
             L  S +IA +G++V+  R  +IS+NIANA TT    G    R+  +      +     
Sbjct: 1   MGLFTSINIAATGMSVERLRTDVISDNIANASTTRTPEGGKFQRKSVVLTPIAENPTFRN 60

Query: 58  -----------SGGVRVKKIGVDQSTFVEEFDPGHPVA----NASGIVKYPNVNVLVETA 102
                        GVR+ KI  D +     +DP HP A      +G V+YPNVN++ E  
Sbjct: 61  PFVPADIDNGPGAGVRISKIVKDTAQGRMVYDPSHPDAIQSGPNAGYVEYPNVNIVNEMV 120

Query: 103 DMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           D+   +R Y AN   I+ S DM ++ L++ R
Sbjct: 121 DLISASRAYEANSSVIQGSKDMFSSALEIAR 151


>gi|312882661|ref|ZP_07742398.1| flagellar basal body rod protein FlgC [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309369622|gb|EFP97137.1| flagellar basal body rod protein FlgC [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 138

 Score =  105 bits (262), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 38/138 (27%), Positives = 61/138 (44%), Gaps = 6/138 (4%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             L    ++  S ++ +S R+   S N+ANA +   +       R  +   E+     G 
Sbjct: 1   MSLFNVFNVTGSAMSAESVRLNTTSSNLANADSISSSAKDTYKARHAVFGAELSKAKYGR 60

Query: 62  ------RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
                 +V  I   Q     E++P HP+AN  G +  PNVNV+ E A+M   +R Y  N+
Sbjct: 61  DHTVPVKVLGIVESQKPLNAEYNPDHPLANNEGYIYKPNVNVMEEMANMISASRSYQTNV 120

Query: 116 QTIKQSHDMMTTTLDLLR 133
           Q    S  M+  TL + +
Sbjct: 121 QVADASKQMLLRTLQMGQ 138


>gi|239628951|ref|ZP_04671982.1| flagellar basal-body rod protein FlgC [Clostridiales bacterium
           1_7_47_FAA]
 gi|239519097|gb|EEQ58963.1| flagellar basal-body rod protein FlgC [Clostridiales bacterium
           1_7_47FAA]
          Length = 144

 Score =  105 bits (262), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 40/144 (27%), Positives = 65/144 (45%), Gaps = 12/144 (8%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG---- 57
              + S +I  S L  +  R  II +N+AN  TT    G    R++ +  E  ++     
Sbjct: 1   MGYLDSLNITGSALTAERFRTDIIMQNLANQNTTRTADGGPYRRKQVVFRENSLNFKSEL 60

Query: 58  --------SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNR 109
                   +GGV V+++   Q+  V  +DP HP A+  G V  PNVN   E  D+   +R
Sbjct: 61  GKAMTKAENGGVYVEEVVESQNPLVPVYDPDHPDADEDGYVMMPNVNSAEEMVDLMAASR 120

Query: 110 LYMANLQTIKQSHDMMTTTLDLLR 133
            Y AN+  +  +  M    L++ +
Sbjct: 121 AYEANVTALNIAKSMALKALEIGK 144


>gi|241766918|ref|ZP_04764724.1| flagellar basal-body rod protein FlgC [Acidovorax delafieldii 2AN]
 gi|241362622|gb|EER58470.1| flagellar basal-body rod protein FlgC [Acidovorax delafieldii 2AN]
          Length = 134

 Score =  105 bits (261), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 34/134 (25%), Positives = 62/134 (46%), Gaps = 2/134 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM--HGSG 59
             + +   ++ S ++ QS R+ +++ N+AN        G     R+ +     M    S 
Sbjct: 1   MSMFSIFSVSGSAISAQSQRLNVVASNLANVDAVAGPDGQAYKARQVVFQTAPMGADSSA 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GVRV  I  + +      DP HP A+A G V + NVN + E  +M   +R Y  N++ + 
Sbjct: 61  GVRVSAISENNTPGRRIHDPSHPSADAQGYVTHSNVNAVDEMVNMISASRSYQNNVEVMN 120

Query: 120 QSHDMMTTTLDLLR 133
            +  ++  TL + +
Sbjct: 121 TAKSLLLKTLQMGQ 134


>gi|315498435|ref|YP_004087239.1| flagellar basal-body rod protein flgc [Asticcacaulis excentricus CB
           48]
 gi|315416447|gb|ADU13088.1| flagellar basal-body rod protein FlgC [Asticcacaulis excentricus CB
           48]
          Length = 140

 Score =  105 bits (261), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 56/129 (43%), Positives = 82/129 (63%), Gaps = 1/129 (0%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRK-TISFEEVMHGSGGVRVK 64
            +  +A S L  Q ARM+II+ENIANA +TG TPG+DPYR +  +     + G+ GV++ 
Sbjct: 11  PTLSVAASALRAQQARMRIIAENIANADSTGQTPGADPYRGQIPVFEAAKIDGAMGVKLA 70

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
            +  D++ F  ++DP HP A+A+G VK  NV  L+++ DMR+  R Y ANL  I+ +  M
Sbjct: 71  AVRPDEAAFEMDYDPSHPAADANGYVKRSNVKSLIQSMDMRDAQRAYEANLNVIETTRSM 130

Query: 125 MTTTLDLLR 133
              TLDLL+
Sbjct: 131 EQKTLDLLK 139


>gi|42524765|ref|NP_970145.1| flagellar basal-body rod protein [Bdellovibrio bacteriovorus HD100]
 gi|39576975|emb|CAE78204.1| flagellar basal-body rod protein [Bdellovibrio bacteriovorus HD100]
          Length = 147

 Score =  105 bits (261), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 43/147 (29%), Positives = 70/147 (47%), Gaps = 14/147 (9%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M   +    I++SG+A Q  RM  I+ NIAN  TT    G    R+  +        + G
Sbjct: 1   MADFLTGMRISSSGMAAQRMRMNTIASNIANINTTQTPEGGPYRRKDVVFEAMPDAKNFG 60

Query: 61  V--------------RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
                          +V  +  D+   + +++P HP ANA G V YPN+N++ E  +M +
Sbjct: 61  EIISSTDPAGSFQRVQVTDVISDRKAPLLKYEPDHPDANADGYVAYPNINLMEEMTNMIQ 120

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
            +R Y AN+  ++ S DM  + L++ R
Sbjct: 121 ASRSYEANVTAVQASKDMALSALEIGR 147


>gi|323705448|ref|ZP_08117023.1| flagellar basal-body rod protein FlgC [Thermoanaerobacterium
           xylanolyticum LX-11]
 gi|323535350|gb|EGB25126.1| flagellar basal-body rod protein FlgC [Thermoanaerobacterium
           xylanolyticum LX-11]
          Length = 149

 Score =  105 bits (261), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 49/149 (32%), Positives = 75/149 (50%), Gaps = 18/149 (12%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-- 59
              + S  I+ +GL  +  RM +IS+NIAN  TT  + G  PYRRK +  +E+ + S   
Sbjct: 1   MGFLNSIDISATGLTAERLRMDVISQNIANVDTTRTSNG-GPYRRKLVVLKEIDNQSSFS 59

Query: 60  --------------GVRVKKIGVDQ-STFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
                         GV V  I  D  + F   +DPG+P A+++G V YPNVN++ E  DM
Sbjct: 60  DMLNAAKGSSTVGNGVEVVSIEEDNKTPFNRVYDPGNPDADSTGYVNYPNVNIVSEMVDM 119

Query: 105 RETNRLYMANLQTIKQSHDMMTTTLDLLR 133
               R Y AN+  +  +  M+   L++ +
Sbjct: 120 ISATRAYEANVTAVNSTKSMIEKALEIGK 148


>gi|148266225|ref|YP_001232931.1| flagellar basal-body rod protein FlgC [Geobacter uraniireducens
           Rf4]
 gi|146399725|gb|ABQ28358.1| flagellar basal-body rod protein FlgC [Geobacter uraniireducens
           Rf4]
          Length = 146

 Score =  105 bits (261), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 47/146 (32%), Positives = 63/146 (43%), Gaps = 14/146 (9%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR--------------K 47
                S  I++S L  +  RM +IS N+ANA +T    G    R+               
Sbjct: 1   MDFFTSMDISSSALTAERTRMNLISSNLANANSTRTAEGGPYRRKDAVFSARPVAESFSS 60

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
             S          V V +I  DQ+    ++DP HP AN  G V  PNVNV+ E ADM   
Sbjct: 61  VFSKTGNRGVPQQVGVVQINEDQNPPRLQYDPTHPDANQQGYVALPNVNVVEEMADMIAA 120

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y AN+   + +  M   TL+L R
Sbjct: 121 TRTYEANVTAAQAAKSMAMKTLELGR 146


>gi|332981429|ref|YP_004462870.1| flagellar basal-body rod protein FlgC [Mahella australiensis 50-1
           BON]
 gi|332699107|gb|AEE96048.1| flagellar basal-body rod protein FlgC [Mahella australiensis 50-1
           BON]
          Length = 129

 Score =  105 bits (261), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 47/132 (35%), Positives = 67/132 (50%), Gaps = 3/132 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             +  + + + SGL  Q  RM IIS+NIANA TT    G    R+  +  +     SG V
Sbjct: 1   MGMFDAINNSASGLTAQRLRMDIISQNIANANTTRTPEGGPYVRQMPVFSQS---SSGMV 57

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
           +V+ I  D   F   +DP HP A+ +G V+ PNV+V  E  DM    R Y AN+  I  +
Sbjct: 58  QVQAIVSDPRPFKLTYDPSHPDADPNGYVRMPNVDVTEEMVDMVSATRSYEANVTVIDAA 117

Query: 122 HDMMTTTLDLLR 133
            +M    +D+ R
Sbjct: 118 KNMAMRAMDIAR 129


>gi|332533177|ref|ZP_08409046.1| flagellar basal-body rod protein FlgC [Pseudoalteromonas
           haloplanktis ANT/505]
 gi|332037459|gb|EGI73913.1| flagellar basal-body rod protein FlgC [Pseudoalteromonas
           haloplanktis ANT/505]
          Length = 143

 Score =  105 bits (261), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 41/142 (28%), Positives = 66/142 (46%), Gaps = 10/142 (7%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-- 59
             L     IA SG++ Q+ R+   + NI+NA T   +       R+ +   E+   S   
Sbjct: 1   MSLYNVFDIAGSGMSAQNVRLNTTASNISNANTISSSQDKTYRARQPVFAAELTKASASV 60

Query: 60  --------GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
                   GV+V  I    +    E++P HP A+ +G +  PNVNV+ E A+M   +R Y
Sbjct: 61  SNQQGSAVGVKVLGIVESDAPLQIEYNPNHPSADENGYIYKPNVNVVEEMANMISASRSY 120

Query: 112 MANLQTIKQSHDMMTTTLDLLR 133
             N+Q    +  M++ TL L +
Sbjct: 121 QTNVQVADAAKQMLSKTLLLGQ 142


>gi|168187558|ref|ZP_02622193.1| flagellar basal-body rod protein FlgC [Clostridium botulinum C str.
           Eklund]
 gi|169294598|gb|EDS76731.1| flagellar basal-body rod protein FlgC [Clostridium botulinum C str.
           Eklund]
          Length = 145

 Score =  105 bits (261), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 50/145 (34%), Positives = 68/145 (46%), Gaps = 13/145 (8%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGS-DPYRRKTISFEEVMHGS-- 58
               +S  I+ SGL+ +  RM  I  NI N +TT    G   PYRRK   F+E  +    
Sbjct: 1   MNAFSSMRISASGLSAERLRMDTIFSNITNFKTTRGKDGQKQPYRRKIAVFQENFNKELN 60

Query: 59  ----------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                      GV+   I  D+S     ++P HP A+ +G V  PNVN+L E ADM    
Sbjct: 61  KSGNGYESRLNGVKAVGIVEDKSQLRRVYNPNHPDADENGYVLMPNVNILNEMADMIAAT 120

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R Y AN+  I  S +M    L++ R
Sbjct: 121 RAYEANVTAINSSKNMFMKALEIGR 145


>gi|317153716|ref|YP_004121764.1| flagellar basal-body rod protein FlgC [Desulfovibrio aespoeensis
           Aspo-2]
 gi|316943967|gb|ADU63018.1| flagellar basal-body rod protein FlgC [Desulfovibrio aespoeensis
           Aspo-2]
          Length = 145

 Score =  105 bits (261), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 45/145 (31%), Positives = 67/145 (46%), Gaps = 14/145 (9%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS---------- 50
           MD++  +  I  SGL  Q A + +IS N+AN RTT    G    R+              
Sbjct: 1   MDFMT-ALDIGASGLKAQRATLNVISMNMANMRTTKTLEGGPYQRKSVSFESTPVYSPFD 59

Query: 51  ---FEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                ++     GV+V  +  D+  F + ++P HP AN  G V YP++NV+ E  +M   
Sbjct: 60  EAMNNQLNRELHGVKVLGVTADERPFKQVYEPHHPDANDLGYVYYPDINVVEEMTNMMNA 119

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLL 132
            R Y AN+QTI+    M    L + 
Sbjct: 120 TRGYEANVQTIESVKQMFNKALQIG 144


>gi|118581824|ref|YP_903074.1| flagellar basal-body rod protein FlgC [Pelobacter propionicus DSM
           2379]
 gi|118504534|gb|ABL01017.1| flagellar basal-body rod protein FlgC [Pelobacter propionicus DSM
           2379]
          Length = 145

 Score =  105 bits (261), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 41/145 (28%), Positives = 65/145 (44%), Gaps = 13/145 (8%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR-------------KT 48
               ++ +++ S L+ +  RM +IS N+ANA  T    G    R+               
Sbjct: 1   MDFFSAMNVSASALSAERTRMNLISSNLANANATRTPEGGPYKRKDAVFAATPVEGRFAR 60

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                       V V+++  DQS    ++DP HP AN  G V  PNVNV+ E ADM   +
Sbjct: 61  ALDGAANREIRQVEVQQVVEDQSPPRIQYDPSHPDANPQGYVAMPNVNVIEEMADMIGAS 120

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R Y AN+  ++ +  M    L++ +
Sbjct: 121 RTYEANVTAVQTAKSMALKALEISK 145


>gi|251780808|ref|ZP_04823728.1| flagellar basal-body rod protein FlgC [Clostridium botulinum E1
           str. 'BoNT E Beluga']
 gi|243085123|gb|EES51013.1| flagellar basal-body rod protein FlgC [Clostridium botulinum E1
           str. 'BoNT E Beluga']
          Length = 135

 Score =  105 bits (261), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 46/135 (34%), Positives = 71/135 (52%), Gaps = 3/135 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--- 58
                S  I+ +G++ +  RM  I+ N+ N+ TT    GS PY RK   F+E +  +   
Sbjct: 1   MNAFTSMQISATGISAERLRMDTITSNMTNSSTTRSADGSGPYVRKIAVFQEALDENRKM 60

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
            G++  KI  D+S F   + P  P A+ +G V  PNVNVL E ADM  + R Y AN++T+
Sbjct: 61  AGIKPVKIVEDKSPFRRVYKPTDPDADETGYVTMPNVNVLNEMADMMVSTRSYEANVETL 120

Query: 119 KQSHDMMTTTLDLLR 133
                M +  L++ +
Sbjct: 121 NALKGMFSKALEIGK 135


>gi|304316910|ref|YP_003852055.1| flagellar basal-body rod protein FlgC [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302778412|gb|ADL68971.1| flagellar basal-body rod protein FlgC [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 149

 Score =  104 bits (260), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 47/149 (31%), Positives = 73/149 (48%), Gaps = 18/149 (12%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-- 59
              + S  I+ +GL  +  RM +IS+NIAN  TT  + G  PYRRK +  +E+ + +   
Sbjct: 1   MGFLNSIDISATGLTAERLRMDVISQNIANVDTTRTSNG-GPYRRKLVVLKEIDNQNSFS 59

Query: 60  --------------GVRVKKIGVDQ-STFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
                         GV V  I  D  +     +DPG+P A+ +G V YPNVN++ E  DM
Sbjct: 60  DMLNTAKGIQAVGNGVEVVSIVDDNKTPLNRVYDPGNPDADNTGYVNYPNVNIVSEMVDM 119

Query: 105 RETNRLYMANLQTIKQSHDMMTTTLDLLR 133
               R Y AN+  +  +  M+   L++ +
Sbjct: 120 ISATRAYEANVTAVNSAKSMIEKALEIGK 148


>gi|226313072|ref|YP_002772966.1| flagellar basal-body rod protein FlgC [Brevibacillus brevis NBRC
           100599]
 gi|226096020|dbj|BAH44462.1| flagellar basal-body rod protein FlgC [Brevibacillus brevis NBRC
           100599]
          Length = 152

 Score =  104 bits (260), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 44/152 (28%), Positives = 61/152 (40%), Gaps = 21/152 (13%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDT---PGSDPYRRKTISFEEVMHG- 57
             L    + + S L     R+  IS NIANA  T          PYRRK +      +G 
Sbjct: 1   MSLFQGINTSASALTANRLRLDTISSNIANAEVTRANFVDGAWQPYRRKMVELSPQTNGT 60

Query: 58  -----------------SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVE 100
                              GV+V  I  D + F   +DP HP A+  G +  PNV+ + E
Sbjct: 61  FDNFLQAAVGTVSGSQGGQGVKVTAIQEDNTPFKRVYDPSHPDADQDGYLLMPNVDPMKE 120

Query: 101 TADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
             DM   +R Y AN+  +  S  MM   L++ 
Sbjct: 121 MVDMISASRSYEANVTALNASKAMMLKALEIK 152


>gi|126668556|ref|ZP_01739510.1| flagellar basal-body rod protein C [Marinobacter sp. ELB17]
 gi|126626961|gb|EAZ97604.1| flagellar basal-body rod protein C [Marinobacter sp. ELB17]
          Length = 147

 Score =  104 bits (260), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 46/147 (31%), Positives = 64/147 (43%), Gaps = 14/147 (9%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS----------- 50
             L     IA SG+  QS R+   + NIANA T   + G     RK +            
Sbjct: 1   MSLGNIFDIAGSGMTAQSLRLNTTASNIANAETASSSTGETYRARKPVFAAVQQSLLNGN 60

Query: 51  ---FEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
              F     G  GVRV+ I    +     ++P HP A+  G V YPNVNV  E ADM  +
Sbjct: 61  QPAFGSGAEGGAGVRVEGIVESDADLQMRYEPNHPAASEDGYVYYPNVNVAEEMADMMSS 120

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLRD 134
           +R +  N+  +  +  MM   L L ++
Sbjct: 121 SRSFQMNVDIMNTAKSMMQRILTLGQN 147


>gi|149927796|ref|ZP_01916047.1| flagellar basal-body rod protein FlgC [Limnobacter sp. MED105]
 gi|149823418|gb|EDM82649.1| flagellar basal-body rod protein FlgC [Limnobacter sp. MED105]
          Length = 140

 Score =  104 bits (260), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 39/138 (28%), Positives = 63/138 (45%), Gaps = 7/138 (5%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             L  S  +A   +  Q+ R+  ++ N+AN  T    P S    RK +    +   + G 
Sbjct: 1   MSLFNSFKLAGGAMQAQTTRLNTVASNLANVDTAAGDPNSVYQARKVVFEAVLQKAAPGK 60

Query: 62  -------RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
                  +VK I  D++   + FDP HP+A+  G V  PNVN + E  DM   +R Y  N
Sbjct: 61  ASLAENVQVKDIVEDKTEAKKMFDPKHPMADEDGYVYMPNVNAVEEMVDMLAASRSYQTN 120

Query: 115 LQTIKQSHDMMTTTLDLL 132
            + +  +  +M  TL++ 
Sbjct: 121 AEVMNTAKQLMLKTLNMG 138


>gi|87119678|ref|ZP_01075575.1| Flagellar basal-body rod protein FlgC [Marinomonas sp. MED121]
 gi|86165154|gb|EAQ66422.1| Flagellar basal-body rod protein FlgC [Marinomonas sp. MED121]
          Length = 149

 Score =  104 bits (260), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 38/148 (25%), Positives = 61/148 (41%), Gaps = 16/148 (10%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             L     I+ S ++ Q+ R+  ++ NIANA +   +       RK +    +     G 
Sbjct: 1   MSLNNIFAISGSAMSAQTIRLNTVASNIANADSVASSEDQTYRARKPVFSTMMQESMRGY 60

Query: 62  R----------------VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
                            VK I    +     ++P HP+AN SG V Y NVN + E ADM 
Sbjct: 61  GWNDVSNDEFGAGVGVEVKGIVESDAPLQPRYEPDHPMANESGYVYYSNVNPVEEMADMM 120

Query: 106 ETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             +R +  N++ +  +  MM   L L +
Sbjct: 121 SASRSFQTNVEVMNSAKSMMQKMLTLGQ 148


>gi|119469948|ref|ZP_01612753.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
           [Alteromonadales bacterium TW-7]
 gi|119446658|gb|EAW27931.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
           [Alteromonadales bacterium TW-7]
          Length = 143

 Score =  104 bits (260), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 41/142 (28%), Positives = 66/142 (46%), Gaps = 10/142 (7%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-- 59
             L     IA SG++ Q+ R+   + NI+NA T   +       R+ +   E+   S   
Sbjct: 1   MSLYNVFDIAGSGMSAQNVRLNTTASNISNANTISSSQDKTYRARQPVFAAELTKASESV 60

Query: 60  --------GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
                   GV+V  I    +    E++P HP A+ +G +  PNVNV+ E A+M   +R Y
Sbjct: 61  SNNQGSSVGVKVLGIVESSAPLQIEYNPNHPSADENGYIYKPNVNVVEEMANMISASRSY 120

Query: 112 MANLQTIKQSHDMMTTTLDLLR 133
             N+Q    +  M++ TL L +
Sbjct: 121 ETNVQVADAAKQMLSKTLLLGQ 142


>gi|291562032|emb|CBL40848.1| flagellar basal-body rod protein FlgC [butyrate-producing bacterium
           SS3/4]
          Length = 149

 Score =  104 bits (260), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 50/150 (33%), Positives = 66/150 (44%), Gaps = 19/150 (12%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--- 58
              + S  I+ SG++ Q  RM I +ENIAN  TT    G  PYRRK +  E     S   
Sbjct: 1   MAFLGSFDISASGMSAQRVRMDIAAENIANMDTTRTESG-GPYRRKNVLLESYSDTSFAQ 59

Query: 59  ---------------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETAD 103
                           GVRV  I  D     + ++P HP A+A G V  PNV+VL ET D
Sbjct: 60  AMENAARGKGITSRHAGVRVSGIVEDDREAKKVYNPDHPDADADGYVTMPNVDVLKETVD 119

Query: 104 MRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
                R Y AN+  +     M    L++ +
Sbjct: 120 SMSATRSYEANVTALNAIKLMAQKALEIGK 149


>gi|254419217|ref|ZP_05032941.1| flagellar basal-body rod protein FlgC [Brevundimonas sp. BAL3]
 gi|196185394|gb|EDX80370.1| flagellar basal-body rod protein FlgC [Brevundimonas sp. BAL3]
          Length = 128

 Score =  104 bits (260), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 56/127 (44%), Positives = 80/127 (62%), Gaps = 1/127 (0%)

Query: 8   AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRK-TISFEEVMHGSGGVRVKKI 66
             +A S L  Q +RM++I+ENIANA++T  TPG +PYRR+  +     + G+ GV + ++
Sbjct: 1   MAVAASALKAQQSRMRVIAENIANAQSTARTPGGEPYRRQIPVFQAREVDGATGVTLAEV 60

Query: 67  GVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
             DQ  F  ++DP HP ANA G V  PNV+ LVE  DMRE  R Y ANL  I+ +  M +
Sbjct: 61  RPDQGEFKMDYDPSHPAANAQGYVMRPNVDTLVEAMDMREAQRAYEANLNVIETARSMDS 120

Query: 127 TTLDLLR 133
            TLD+++
Sbjct: 121 RTLDIIK 127


>gi|170748109|ref|YP_001754369.1| flagellar basal body rod protein FlgC [Methylobacterium
           radiotolerans JCM 2831]
 gi|170654631|gb|ACB23686.1| flagellar basal-body rod protein FlgC [Methylobacterium
           radiotolerans JCM 2831]
          Length = 138

 Score =  104 bits (260), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 72/136 (52%), Positives = 98/136 (72%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           +D L AS+ IA SG+  QS R+++I+ENIANAR+TG T GSDPY RKTI+F   +  + G
Sbjct: 2   IDPLAASSRIAGSGMEAQSERLRVIAENIANARSTGQTAGSDPYTRKTITFRTALDRASG 61

Query: 61  VR---VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
                +++IG D++ F  E+DPG+P A+A G VK PNVN+L+E ADMRE NR Y ANLQ 
Sbjct: 62  TAAVAIRQIGEDKAPFRVEYDPGNPAADADGNVKLPNVNMLIEMADMREANRSYEANLQM 121

Query: 118 IKQSHDMMTTTLDLLR 133
           IKQ+  M+ + ++LLR
Sbjct: 122 IKQTRAMVASIIELLR 137


>gi|30248320|ref|NP_840390.1| flagella basal body rod protein [Nitrosomonas europaea ATCC 19718]
 gi|30138206|emb|CAD84214.1| Flagella basal body rod protein [Nitrosomonas europaea ATCC 19718]
          Length = 134

 Score =  104 bits (260), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 36/134 (26%), Positives = 66/134 (49%), Gaps = 2/134 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF--EEVMHGSG 59
             L +  ++A S +A QS R+ +++ N+ANA +   + G     R+ +    +     + 
Sbjct: 1   MSLFSVFNVAGSSMAAQSQRLNVVASNLANADSATSSTGEAYRSRQVVFRTIDVTADKAK 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GV+V  +  D S     +DP HP+AN  G V  PNVNV+ E  +M   +R Y  ++  + 
Sbjct: 61  GVKVAGVVNDPSPMRVVYDPKHPMANEKGYVTLPNVNVVDEMVNMMSASRSYQNSVDMMN 120

Query: 120 QSHDMMTTTLDLLR 133
            +  ++   L + +
Sbjct: 121 VTKTLLQKALTIGQ 134


>gi|260428875|ref|ZP_05782852.1| flagellar basal-body rod protein FlgC [Citreicella sp. SE45]
 gi|260419498|gb|EEX12751.1| flagellar basal-body rod protein FlgC [Citreicella sp. SE45]
          Length = 130

 Score =  104 bits (260), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 46/133 (34%), Positives = 73/133 (54%), Gaps = 4/133 (3%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M     +  +++SGL  Q++R++I+SENIAN  T G    + P+     +      G   
Sbjct: 1   MSDFSNALSVSSSGLRAQASRLRIVSENIANVDTPGYHRKTIPF----ETSGNARDGVQM 56

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V   ++ +D+S     +DP HP+A+ +G     NV+++VE AD RE  R Y ANL+  +Q
Sbjct: 57  VETGRVDLDRSDLERIYDPQHPLADEAGFYDGTNVDLIVELADAREAQRSYEANLKMFEQ 116

Query: 121 SHDMMTTTLDLLR 133
           +  M +  LDLLR
Sbjct: 117 TRQMSSNLLDLLR 129


>gi|160939631|ref|ZP_02086979.1| hypothetical protein CLOBOL_04523 [Clostridium bolteae ATCC
           BAA-613]
 gi|158437422|gb|EDP15186.1| hypothetical protein CLOBOL_04523 [Clostridium bolteae ATCC
           BAA-613]
          Length = 144

 Score =  104 bits (260), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 40/144 (27%), Positives = 65/144 (45%), Gaps = 12/144 (8%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG---- 57
              + S +I  S L  +  R  II +N+AN  TT    G    R++ +  E  ++     
Sbjct: 1   MGYLDSLNITGSALTAERFRTDIIMQNLANQNTTRTAEGGPYKRKQVVFRENTLNFKSEL 60

Query: 58  --------SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNR 109
                   +GGV V+++   Q+  V  +DP HP A+  G V  PNVN   E  D+   +R
Sbjct: 61  GKAMTKAENGGVFVEEVVESQNPSVPVYDPDHPDADEDGYVMMPNVNSAEEMVDLMAASR 120

Query: 110 LYMANLQTIKQSHDMMTTTLDLLR 133
            Y AN+  +  +  M    L++ +
Sbjct: 121 AYEANVTALNVAKSMALKALEIGK 144


>gi|23099008|ref|NP_692474.1| flagellar basal body rod protein FlgC [Oceanobacillus iheyensis
           HTE831]
 gi|22777236|dbj|BAC13509.1| flagellar basal-body rod protein [Oceanobacillus iheyensis HTE831]
          Length = 151

 Score =  104 bits (260), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 46/151 (30%), Positives = 70/151 (46%), Gaps = 19/151 (12%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSD----PYRRKTISFEEVMHG 57
             +  S + + SGL  Q  RM I+S N+ANA++T  T   D    PYRRK ++ +   + 
Sbjct: 1   MSIFNSMNTSASGLTAQRLRMDIVSSNVANAQSTRATINEDGEFEPYRRKMVTLQSEQNQ 60

Query: 58  ---------------SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETA 102
                          + GV+   I  D + F   ++P HP AN  G V+ PNV+ L E  
Sbjct: 61  FKNVLKHATSSSSTSTSGVKATSITEDNTPFNLVYNPQHPDANEQGYVEMPNVDPLKEMV 120

Query: 103 DMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           D+    R Y AN+     S  M+   L++ +
Sbjct: 121 DLMSATRSYEANITAFNASKGMLMKALEIGK 151


>gi|262404542|ref|ZP_06081097.1| flagellar basal-body rod protein FlgC [Vibrio sp. RC586]
 gi|262349574|gb|EEY98712.1| flagellar basal-body rod protein FlgC [Vibrio sp. RC586]
          Length = 138

 Score =  104 bits (260), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 39/138 (28%), Positives = 63/138 (45%), Gaps = 6/138 (4%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM------ 55
             L +  ++  S ++ +S R+   S N+ANA +   +       R  +   E+       
Sbjct: 1   MSLFSVFNVTGSAMSAESVRLNTTSSNLANADSISSSAKDTYKARHAVFGAELSKARFNR 60

Query: 56  HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
             +  V+V  I       V EF+P HP+AN  G +  PNVNV+ E A+M   +R Y  N+
Sbjct: 61  EPNVPVKVLGIVESDKPLVAEFNPEHPLANDEGYIYKPNVNVMEEMANMISASRSYQTNV 120

Query: 116 QTIKQSHDMMTTTLDLLR 133
           Q    S  M+  TL + +
Sbjct: 121 QVADASKQMLLRTLQMGQ 138


>gi|121596115|ref|YP_988011.1| flagellar basal-body rod protein FlgC [Acidovorax sp. JS42]
 gi|222112270|ref|YP_002554534.1| flagellar basal-body rod protein flgc [Acidovorax ebreus TPSY]
 gi|120608195|gb|ABM43935.1| flagellar basal-body rod protein FlgC [Acidovorax sp. JS42]
 gi|221731714|gb|ACM34534.1| flagellar basal-body rod protein FlgC [Acidovorax ebreus TPSY]
          Length = 134

 Score =  104 bits (260), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 32/134 (23%), Positives = 62/134 (46%), Gaps = 2/134 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM--HGSG 59
             + +  +++ S ++ QS R+ +++ N+AN        G     R+ +     M    + 
Sbjct: 1   MSMFSIFNVSGSAISAQSQRLNVVASNLANVDAVAGPDGQAYKARQVVFQTAPMGPESAA 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GVRV  I           DP +P+A+A G V + NVN + E  +M   +R Y  N++ + 
Sbjct: 61  GVRVSSIQESDQPGRRVHDPANPMADAEGYVTHSNVNAVEEMVNMISASRSYQNNVEVMN 120

Query: 120 QSHDMMTTTLDLLR 133
            +  ++  TL + +
Sbjct: 121 TAKTLLLKTLQMGQ 134


>gi|323498422|ref|ZP_08103418.1| flagellar basal body rod protein FlgC [Vibrio sinaloensis DSM
           21326]
 gi|323316495|gb|EGA69510.1| flagellar basal body rod protein FlgC [Vibrio sinaloensis DSM
           21326]
          Length = 138

 Score =  104 bits (260), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 37/138 (26%), Positives = 60/138 (43%), Gaps = 6/138 (4%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             L    ++  S ++ +S R+   S N+ANA +   +       R  +   E+     G 
Sbjct: 1   MSLFNVFNVTGSAMSAESVRLNTTSSNLANADSISSSAKDTYKARHAVFGAELSKAKYGN 60

Query: 62  ------RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
                 +V  I         E++P HP+AN  G +  PNVNV+ E A+M   +R Y  N+
Sbjct: 61  DHTVPVKVMGIVESDKPLSAEYNPDHPLANDEGYIYKPNVNVMEEMANMISASRSYQTNV 120

Query: 116 QTIKQSHDMMTTTLDLLR 133
           Q    S  M+  TL + +
Sbjct: 121 QVADASKQMLLRTLQMGQ 138


>gi|77359720|ref|YP_339295.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
           [Pseudoalteromonas haloplanktis TAC125]
 gi|76874631|emb|CAI85852.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
           [Pseudoalteromonas haloplanktis TAC125]
          Length = 143

 Score =  104 bits (260), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 41/142 (28%), Positives = 65/142 (45%), Gaps = 10/142 (7%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-- 59
             L     IA SG++ Q+ R+   + NI+NA T   +       R+ +   E+   S   
Sbjct: 1   MSLYNVFDIAGSGMSAQNVRLNTTASNISNANTISSSQDKTYRARQPVFAAELTKASASA 60

Query: 60  --------GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
                   GV+V  I         E++P HP A+ +G +  PNVNV+ E A+M   +R Y
Sbjct: 61  SNPQGSAVGVKVLGIVESNKPLQIEYNPNHPSADENGYIYKPNVNVVEEMANMISASRSY 120

Query: 112 MANLQTIKQSHDMMTTTLDLLR 133
             N+Q    +  M++ TL L +
Sbjct: 121 QTNVQVADAAKQMLSKTLLLGQ 142


>gi|261253616|ref|ZP_05946189.1| flagellar basal-body rod protein FlgC [Vibrio orientalis CIP
           102891]
 gi|260937007|gb|EEX92996.1| flagellar basal-body rod protein FlgC [Vibrio orientalis CIP
           102891]
          Length = 138

 Score =  104 bits (260), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 36/138 (26%), Positives = 60/138 (43%), Gaps = 6/138 (4%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             L    ++  S ++ +S R+   S N+ANA +   +       R  +   E+     G 
Sbjct: 1   MSLFNVFNVTGSAMSAESVRLNTTSSNLANADSISSSAKDTYKARHAVFGAELSKAKYGR 60

Query: 62  ------RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
                 ++  I         E++P HP+AN  G +  PNVNV+ E A+M   +R Y  N+
Sbjct: 61  DHTVPVKLMGIVESDKPLSAEYNPDHPLANDEGYIYKPNVNVMEEMANMISASRSYQTNV 120

Query: 116 QTIKQSHDMMTTTLDLLR 133
           Q    S  M+  TL + +
Sbjct: 121 QVADASKQMLLRTLQMGQ 138


>gi|254508426|ref|ZP_05120546.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus 16]
 gi|219548636|gb|EED25641.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus 16]
          Length = 138

 Score =  104 bits (260), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 37/138 (26%), Positives = 60/138 (43%), Gaps = 6/138 (4%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             L    ++  S ++ +S R+   S N+ANA +   +       R  +   E+     G 
Sbjct: 1   MSLFNVFNVTGSAMSAESVRLNTTSSNLANADSVSSSAKDTYKARHAVFGAELSKAKYGN 60

Query: 62  ------RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
                 +V  I         E++P HP+AN  G +  PNVNV+ E A+M   +R Y  N+
Sbjct: 61  DHTVPVKVMGIVESDKPLSAEYNPDHPLANDEGYIYKPNVNVMEEMANMISASRSYQTNV 120

Query: 116 QTIKQSHDMMTTTLDLLR 133
           Q    S  M+  TL + +
Sbjct: 121 QVADASKQMLLRTLQMGQ 138


>gi|115523177|ref|YP_780088.1| flagellar basal body rod protein FlgC [Rhodopseudomonas palustris
           BisA53]
 gi|115517124|gb|ABJ05108.1| flagellar basal-body rod protein FlgC [Rhodopseudomonas palustris
           BisA53]
          Length = 138

 Score =  104 bits (260), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 71/136 (52%), Positives = 95/136 (69%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           +D L AS  IA+SGL VQS R++++SEN+ANA +TG  PG++PYRRKT +F   M  + G
Sbjct: 2   IDPLQASIQIASSGLEVQSTRLRVVSENLANANSTGRAPGAEPYRRKTTTFAAEMDRAQG 61

Query: 61  VRVKKIGVDQ---STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           VRV K+       + F  E++P HP A+  G VK PNVN L+E ADMRETNR Y ANLQ 
Sbjct: 62  VRVVKVKDVGVDRTPFRVEYEPSHPAADQDGYVKLPNVNTLIEMADMRETNRSYEANLQV 121

Query: 118 IKQSHDMMTTTLDLLR 133
           +KQ+  M++ T+D+LR
Sbjct: 122 VKQARSMVSMTIDMLR 137


>gi|120554031|ref|YP_958382.1| flagellar basal body rod protein FlgC [Marinobacter aquaeolei VT8]
 gi|120323880|gb|ABM18195.1| flagellar basal-body rod protein FlgC [Marinobacter aquaeolei VT8]
          Length = 149

 Score =  104 bits (259), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 44/148 (29%), Positives = 62/148 (41%), Gaps = 16/148 (10%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS----------- 50
             L     IA SG+  QS R+   + NIANA T   +  +    RK +            
Sbjct: 1   MSLGNIFDIAGSGMTAQSLRLNTTASNIANAETASSSTDTTYRARKPVFAAIQQAMLNPD 60

Query: 51  -----FEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
                         GVRV+ I    +     ++P HP AN  G V YPNVNV+ E ADM 
Sbjct: 61  QQGFGMGSEEGPGAGVRVEGIVESDAELQMRYEPNHPAANEEGYVYYPNVNVVEEMADMM 120

Query: 106 ETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++R +  N+  +  +  MM   L L +
Sbjct: 121 SSSRSFQMNVDVMNTAKSMMQRILTLGQ 148


>gi|182418356|ref|ZP_02949651.1| flagellar basal-body rod protein FlgC [Clostridium butyricum 5521]
 gi|237666561|ref|ZP_04526546.1| flagellar basal-body rod protein FlgC [Clostridium butyricum E4
           str. BoNT E BL5262]
 gi|182377738|gb|EDT75282.1| flagellar basal-body rod protein FlgC [Clostridium butyricum 5521]
 gi|237657760|gb|EEP55315.1| flagellar basal-body rod protein FlgC [Clostridium butyricum E4
           str. BoNT E BL5262]
          Length = 135

 Score =  104 bits (259), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 50/135 (37%), Positives = 72/135 (53%), Gaps = 3/135 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--- 58
                S  I+ +GL+ +  RM  I+ N++NARTT    GS PY R+   F+E +  +   
Sbjct: 1   MNAFKSMQISATGLSAERLRMDTITSNMSNARTTRSADGSGPYVRRIAVFQEALDANKEM 60

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
            GV+  KI  D S   +E++P HP A+ +G V  PNVNVL E ADM    R Y AN+ T 
Sbjct: 61  AGVKAVKIEKDNSPLRKEYNPNHPDADENGYVTMPNVNVLNEMADMMVATRSYEANVDTF 120

Query: 119 KQSHDMMTTTLDLLR 133
                M +  L++ +
Sbjct: 121 NALKSMFSKALEIGK 135


>gi|17548564|ref|NP_521904.1| flagellar basal-body rod protein FlgC [Ralstonia solanacearum
           GMI1000]
 gi|300693335|ref|YP_003749308.1| flagellar basal-body rod protein flgc (proximal rod protein)
           [Ralstonia solanacearum PSI07]
 gi|17430812|emb|CAD17494.1| probable flagellar basal-body rod protein flgc [Ralstonia
           solanacearum GMI1000]
 gi|299075372|emb|CBJ34667.1| Flagellar basal-body rod protein flgC (proximal rod protein)
           [Ralstonia solanacearum PSI07]
          Length = 135

 Score =  104 bits (259), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 38/135 (28%), Positives = 64/135 (47%), Gaps = 3/135 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS--FEEVMHGSG 59
             L     +A S L  QS RM +++ N+ANA +     G+    ++ +    +E    + 
Sbjct: 1   MSLFKVMDVAGSALTAQSKRMNVVASNLANAESVTGPDGTAYRAKQVVFSPEQETDGYAT 60

Query: 60  GVRVKKIGVDQ-STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
           GV V ++  D  +       PG+P+A+A G V  PNV+V+ E  +M   +R Y AN++  
Sbjct: 61  GVSVDRVVEDTVTPMKRMHQPGNPLADADGYVTMPNVDVVDEMVNMISASRSYQANVEVA 120

Query: 119 KQSHDMMTTTLDLLR 133
             +  M    L L +
Sbjct: 121 NTTKTMAAKALTLGQ 135


>gi|15642198|ref|NP_231830.1| flagellar basal body rod protein FlgC [Vibrio cholerae O1 biovar El
           Tor str. N16961]
 gi|121586290|ref|ZP_01676080.1| flagellar basal-body rod protein FlgC [Vibrio cholerae 2740-80]
 gi|121726545|ref|ZP_01679794.1| flagellar basal-body rod protein FlgC [Vibrio cholerae V52]
 gi|147675208|ref|YP_001217716.1| flagellar basal body rod protein FlgC [Vibrio cholerae O395]
 gi|153817070|ref|ZP_01969737.1| flagellar basal-body rod protein FlgC [Vibrio cholerae NCTC 8457]
 gi|153820804|ref|ZP_01973471.1| flagellar basal-body rod protein FlgC [Vibrio cholerae B33]
 gi|227082323|ref|YP_002810874.1| flagellar basal-body rod protein FlgC [Vibrio cholerae M66-2]
 gi|229507724|ref|ZP_04397229.1| flagellar basal-body rod protein FlgC [Vibrio cholerae BX 330286]
 gi|229512081|ref|ZP_04401560.1| flagellar basal-body rod protein FlgC [Vibrio cholerae B33]
 gi|229519217|ref|ZP_04408660.1| flagellar basal-body rod protein FlgC [Vibrio cholerae RC9]
 gi|229607228|ref|YP_002877876.1| flagellar basal body rod protein FlgC [Vibrio cholerae MJ-1236]
 gi|254849328|ref|ZP_05238678.1| flagellar basal-body rod protein FlgC [Vibrio cholerae MO10]
 gi|255747102|ref|ZP_05421047.1| flagellar basal-body rod protein FlgC [Vibrio cholera CIRS 101]
 gi|262161354|ref|ZP_06030464.1| flagellar basal-body rod protein FlgC [Vibrio cholerae INDRE 91/1]
 gi|262167775|ref|ZP_06035477.1| flagellar basal-body rod protein FlgC [Vibrio cholerae RC27]
 gi|298500423|ref|ZP_07010228.1| flagellar basal-body rod protein FlgC [Vibrio cholerae MAK 757]
 gi|9656755|gb|AAF95344.1| flagellar basal-body rod protein FlgC [Vibrio cholerae O1 biovar El
           Tor str. N16961]
 gi|121549556|gb|EAX59582.1| flagellar basal-body rod protein FlgC [Vibrio cholerae 2740-80]
 gi|121630998|gb|EAX63377.1| flagellar basal-body rod protein FlgC [Vibrio cholerae V52]
 gi|126512338|gb|EAZ74932.1| flagellar basal-body rod protein FlgC [Vibrio cholerae NCTC 8457]
 gi|126521596|gb|EAZ78819.1| flagellar basal-body rod protein FlgC [Vibrio cholerae B33]
 gi|146317091|gb|ABQ21630.1| flagellar basal-body rod protein FlgC [Vibrio cholerae O395]
 gi|227010211|gb|ACP06423.1| flagellar basal-body rod protein FlgC [Vibrio cholerae M66-2]
 gi|227014095|gb|ACP10305.1| flagellar basal-body rod protein FlgC [Vibrio cholerae O395]
 gi|229343906|gb|EEO08881.1| flagellar basal-body rod protein FlgC [Vibrio cholerae RC9]
 gi|229352046|gb|EEO16987.1| flagellar basal-body rod protein FlgC [Vibrio cholerae B33]
 gi|229355229|gb|EEO20150.1| flagellar basal-body rod protein FlgC [Vibrio cholerae BX 330286]
 gi|229369883|gb|ACQ60306.1| flagellar basal-body rod protein FlgC [Vibrio cholerae MJ-1236]
 gi|254845033|gb|EET23447.1| flagellar basal-body rod protein FlgC [Vibrio cholerae MO10]
 gi|255735504|gb|EET90904.1| flagellar basal-body rod protein FlgC [Vibrio cholera CIRS 101]
 gi|262023840|gb|EEY42539.1| flagellar basal-body rod protein FlgC [Vibrio cholerae RC27]
 gi|262028665|gb|EEY47319.1| flagellar basal-body rod protein FlgC [Vibrio cholerae INDRE 91/1]
 gi|297541116|gb|EFH77170.1| flagellar basal-body rod protein FlgC [Vibrio cholerae MAK 757]
          Length = 138

 Score =  104 bits (259), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 38/138 (27%), Positives = 62/138 (44%), Gaps = 6/138 (4%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM------ 55
             L +  ++  S ++ +S R+   S N+ANA +   +       R  +   E+       
Sbjct: 1   MSLFSVFNVTGSAMSAESVRLNTTSSNLANADSISSSAKDTYKARHAVFGAELSKARFNR 60

Query: 56  HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
             +  V+V  I       V EF+P HP+AN  G +   NVNV+ E A+M   +R Y  N+
Sbjct: 61  DPNVPVKVLGIVESDKPLVAEFNPEHPLANDEGYIYKSNVNVMEEMANMISASRSYQTNV 120

Query: 116 QTIKQSHDMMTTTLDLLR 133
           Q    S  M+  TL + +
Sbjct: 121 QVADASKQMLLRTLQMGQ 138


>gi|83647175|ref|YP_435610.1| flagellar basal body rod protein FlgC [Hahella chejuensis KCTC
           2396]
 gi|83635218|gb|ABC31185.1| flagellar basal-body rod protein FlgC [Hahella chejuensis KCTC
           2396]
          Length = 145

 Score =  104 bits (259), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 42/145 (28%), Positives = 64/145 (44%), Gaps = 13/145 (8%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS----------- 50
             + +   IA SG+  QS R+   + N+ANA T   +       RK I            
Sbjct: 1   MAINSIFDIAGSGMTAQSVRLNTTASNLANADTASSSIDQTYRARKPIFAAVHQDALNAA 60

Query: 51  --FEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                    S GV V+ I    ++    + P HP+A+A G V YPNVNV+ E ADM   +
Sbjct: 61  IPPSINDDASRGVEVRAIVESDASLERRYQPDHPMADADGYVFYPNVNVVEEMADMMSAS 120

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R +  N++ +  +  MM   L + +
Sbjct: 121 RSFQTNVEVLNSAKTMMQRLLTIGQ 145


>gi|70731825|ref|YP_261567.1| flagellar basal body rod protein FlgC [Pseudomonas fluorescens
           Pf-5]
 gi|68346124|gb|AAY93730.1| flagellar basal-body rod protein FlgC [Pseudomonas fluorescens
           Pf-5]
          Length = 147

 Score =  104 bits (259), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 43/147 (29%), Positives = 67/147 (45%), Gaps = 15/147 (10%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS----------- 50
             L +  +IA SG++ Q+ R+  ++ NIANA +   +       R  +            
Sbjct: 1   MSLASVFNIAGSGMSAQTTRLNTVASNIANAESVSSSIDQTYRARHPVFATMFQGAQSGG 60

Query: 51  ----FEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
               F+       GV+V  +  DQS     ++P HP A+A G V YPNVNV+ E ADM  
Sbjct: 61  SDSLFQNQDAAGQGVQVLGVVEDQSNLEARYEPNHPAADAKGYVYYPNVNVVEEMADMIS 120

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
            +R +  N + +  +  MM   L L +
Sbjct: 121 ASRSFQTNAEMMNTAKTMMQKVLTLGQ 147


>gi|197103407|ref|YP_002128785.1| putative flagellar basal-body rod protein FlgC [Phenylobacterium
           zucineum HLK1]
 gi|196480683|gb|ACG80210.1| putative flagellar basal-body rod protein FlgC [Phenylobacterium
           zucineum HLK1]
          Length = 141

 Score =  104 bits (259), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 57/129 (44%), Positives = 74/129 (57%), Gaps = 2/129 (1%)

Query: 8   AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
             IA   L  Q ARM+II+ENIAN++TT  TPG DPYRR+   F  +    G V V+ + 
Sbjct: 12  MAIAAMALRAQQARMRIIAENIANSQTTAATPGGDPYRRQMPIFAPLKLEDGSVSVQLVR 71

Query: 68  V--DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
              D + F +E+ PGHP A+ SG V   NV  LVE+ D +   R Y ANL  I  SH M 
Sbjct: 72  TEPDPTAFKKEYSPGHPAADPSGYVTLSNVETLVESLDFKAAQRAYEANLNVIDTSHAME 131

Query: 126 TTTLDLLRD 134
            +T+ LL+ 
Sbjct: 132 QSTMRLLQS 140


>gi|110677659|ref|YP_680666.1| flagellar basal body rod protein FlgC [Roseobacter denitrificans
           OCh 114]
 gi|163733139|ref|ZP_02140583.1| flagellar basal-body rod protein FlgC [Roseobacter litoralis Och
           149]
 gi|109453775|gb|ABG29980.1| flagellar basal-body rod protein FlgC [Roseobacter denitrificans
           OCh 114]
 gi|161393674|gb|EDQ17999.1| flagellar basal-body rod protein FlgC [Roseobacter litoralis Och
           149]
          Length = 129

 Score =  104 bits (259), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 53/135 (39%), Positives = 78/135 (57%), Gaps = 9/135 (6%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M     S  +  SGL  Q+ R++ +SENI+NA T G       YRRK +SFE    G G 
Sbjct: 1   MSEFSKSLDVTTSGLKAQATRLRHLSENISNADTPG-------YRRKLVSFETAFGGQGV 53

Query: 61  VRVK--KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
             V+  ++ +DQST    +DP HP+A+ SG     NV++L+E +D RE  R Y ANL+  
Sbjct: 54  STVETSRVRLDQSTLERVYDPSHPMADESGYFDGSNVDLLIELSDAREAQRSYEANLKVF 113

Query: 119 KQSHDMMTTTLDLLR 133
           +Q+  M ++ ++LLR
Sbjct: 114 EQTRKMSSSLMELLR 128


>gi|126653751|ref|ZP_01725669.1| flagellar basal-body rod protein C [Bacillus sp. B14905]
 gi|126589715|gb|EAZ83851.1| flagellar basal-body rod protein C [Bacillus sp. B14905]
          Length = 153

 Score =  104 bits (258), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 46/153 (30%), Positives = 67/153 (43%), Gaps = 21/153 (13%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGD---TPGSDPYRRKTISFEEVMHG- 57
             +    +   S L  Q  RM +IS N+AN  TT         +PYRRK+++F       
Sbjct: 1   MSIFHGMNTTASALTAQRLRMDVISSNMANMDTTRARQVNGEWEPYRRKSVTFTAQEGQF 60

Query: 58  ----------------SGGVRVKKIGVD-QSTFVEEFDPGHPVANASGIVKYPNVNVLVE 100
                             GV+V +I  D ++ F   +DP HP ANA G V  PNV+ L E
Sbjct: 61  SKFMNVALGKDAKSGVGNGVKVTRIAEDRETPFKLVYDPTHPDANADGYVNLPNVDPLKE 120

Query: 101 TADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             D+    R Y AN+     +  M+T  L++ +
Sbjct: 121 MVDLMSATRSYEANVTVFNANKSMLTKALEIGK 153


>gi|169827118|ref|YP_001697276.1| flagellar basal body rod protein FlgC [Lysinibacillus sphaericus
           C3-41]
 gi|168991606|gb|ACA39146.1| Flagellar basal-body rod protein [Lysinibacillus sphaericus C3-41]
          Length = 153

 Score =  104 bits (258), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 46/153 (30%), Positives = 67/153 (43%), Gaps = 21/153 (13%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGD---TPGSDPYRRKTISFEEVMHG- 57
             +    +   S L  Q  RM +IS N+AN  TT         +PYRRK+++F       
Sbjct: 1   MSIFHGMNTTASALTAQRLRMDVISSNMANMDTTRARQVNGEWEPYRRKSVTFTAQEGQF 60

Query: 58  ----------------SGGVRVKKIGVD-QSTFVEEFDPGHPVANASGIVKYPNVNVLVE 100
                             GV+V +I  D ++ F   +DP HP ANA G V  PNV+ L E
Sbjct: 61  SKFMNVALGKDAKSGVGNGVKVTRISEDRETPFKLVYDPTHPDANADGYVNLPNVDPLKE 120

Query: 101 TADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             D+    R Y AN+     +  M+T  L++ +
Sbjct: 121 MVDLMSATRSYEANVTVFNANKSMLTKALEIGK 153


>gi|288573035|ref|ZP_06391392.1| flagellar basal-body rod protein FlgC [Dethiosulfovibrio
           peptidovorans DSM 11002]
 gi|288568776|gb|EFC90333.1| flagellar basal-body rod protein FlgC [Dethiosulfovibrio
           peptidovorans DSM 11002]
          Length = 140

 Score =  104 bits (258), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 43/140 (30%), Positives = 62/140 (44%), Gaps = 9/140 (6%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             +  S  +A S L      M  IS+N+AN  +   TP   PY R+   F++++   G  
Sbjct: 1   MRVFKSIDVAASSLTAHRLWMDTISQNLANVNS-SRTPEGGPYVRRVPVFQQILDEIGED 59

Query: 62  RVKKIG--------VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
              K G           +     + P HP A+  G V  PNV+V+ E ADM   +R Y A
Sbjct: 60  GKVKGGVKVVEIAKDTTTAPRLVYQPDHPDADQEGYVAMPNVSVVREMADMMVASRAYEA 119

Query: 114 NLQTIKQSHDMMTTTLDLLR 133
           NL     +  M T  LD+L+
Sbjct: 120 NLAVTTSAKSMWTGALDILK 139


>gi|77460471|ref|YP_349978.1| flagellar basal body rod protein FlgC [Pseudomonas fluorescens
           Pf0-1]
 gi|77384474|gb|ABA75987.1| putative flagellar basal-body rod protein [Pseudomonas fluorescens
           Pf0-1]
          Length = 147

 Score =  104 bits (258), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 44/147 (29%), Positives = 67/147 (45%), Gaps = 15/147 (10%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS----------- 50
             L +  +IA SG++ Q+ R+  ++ NIANA T   +       R  +            
Sbjct: 1   MSLSSVFNIAGSGMSAQTTRLNTVASNIANAETVSSSIDQTYRARHPVFATMFQGGQSGG 60

Query: 51  ----FEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
               F+       GV+V  +  DQS     ++P HP A+A G V YPNVNV+ E ADM  
Sbjct: 61  SNSLFQNQDAAGQGVQVMGVVEDQSNLEARYEPNHPAADAKGYVYYPNVNVVEEMADMIS 120

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
            +R +  N + +  +  MM   L L +
Sbjct: 121 ASRSFQTNAEMMNTAKTMMQKVLTLGQ 147


>gi|85712252|ref|ZP_01043303.1| Flagellar basal body rod protein [Idiomarina baltica OS145]
 gi|85693879|gb|EAQ31826.1| Flagellar basal body rod protein [Idiomarina baltica OS145]
          Length = 150

 Score =  104 bits (258), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 36/149 (24%), Positives = 59/149 (39%), Gaps = 17/149 (11%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-- 59
             L    +I+ S ++ QS R+   + N+ANA +   +       R  I    +   SG  
Sbjct: 1   MSLFNIFNISGSAMSAQSVRLNTTASNLANANSVSSSIDETYRARSPIFAAALSDASGKY 60

Query: 60  ---------------GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
                          GV+V  +         E+ P HP+A+ +G +   NVN + E A+M
Sbjct: 61  HGTELTNQTQAGQSAGVKVLGVVESDKPLQIEYAPNHPMADKNGYIYRSNVNTMEEMANM 120

Query: 105 RETNRLYMANLQTIKQSHDMMTTTLDLLR 133
              +R Y  N+Q    +  M    L L +
Sbjct: 121 ISASRSYQTNVQVADTAKTMTQRLLRLGQ 149


>gi|262276419|ref|ZP_06054228.1| flagellar basal-body rod protein FlgC [Grimontia hollisae CIP
           101886]
 gi|262220227|gb|EEY71543.1| flagellar basal-body rod protein FlgC [Grimontia hollisae CIP
           101886]
          Length = 136

 Score =  104 bits (258), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 39/136 (28%), Positives = 64/136 (47%), Gaps = 4/136 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             L    ++  S ++ +S R+   S N+ANA +   +       R  +   E+     G 
Sbjct: 1   MSLFNVFNVTGSAMSAESVRLNTTSSNLANANSVSSSAAETYKARHPVFAAELNRFQQGA 60

Query: 62  ----RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
               +VK I   Q     E++P HP+ANA G +  PNVNV+ E A+M   +R Y  N++ 
Sbjct: 61  SVPVQVKGIVESQKPLRAEYNPEHPMANADGYIYKPNVNVMEEMANMISASRSYQTNVEV 120

Query: 118 IKQSHDMMTTTLDLLR 133
            + S  M+  TL + +
Sbjct: 121 AEASKQMLMRTLQMGK 136


>gi|28211332|ref|NP_782276.1| flagellar basal body rod protein FlgC [Clostridium tetani E88]
 gi|28203772|gb|AAO36213.1| flagellar basal-body rod protein flgC [Clostridium tetani E88]
          Length = 143

 Score =  104 bits (258), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 44/143 (30%), Positives = 64/143 (44%), Gaps = 11/143 (7%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-- 59
             +  +  I+ SGL+ +  R+  I+ NI N+R+T    G    R+  I  E +       
Sbjct: 1   MKMFNNMRISASGLSAERLRIDTIASNIVNSRSTRGKNGEPYRRKVAIFQENLTKEINKQ 60

Query: 60  ---------GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRL 110
                    GV+   I  D S F   ++P HP A+ +G V  PNVN L E AD+    R 
Sbjct: 61  TGKREEVLKGVKAIGIQEDMSEFRRVYEPSHPDADENGYVLMPNVNALNEVADLIAATRS 120

Query: 111 YMANLQTIKQSHDMMTTTLDLLR 133
           Y AN+  I  S  M    L++ R
Sbjct: 121 YEANVDAINSSKSMFMKALEIGR 143


>gi|148380622|ref|YP_001255163.1| flagellar basal-body rod protein FlgC [Clostridium botulinum A str.
           ATCC 3502]
 gi|153931376|ref|YP_001384908.1| flagellar basal body rod protein FlgC [Clostridium botulinum A str.
           ATCC 19397]
 gi|153937867|ref|YP_001388377.1| flagellar basal body rod protein FlgC [Clostridium botulinum A str.
           Hall]
 gi|148290106|emb|CAL84225.1| flagellar basal-body rod protein [Clostridium botulinum A str. ATCC
           3502]
 gi|152927420|gb|ABS32920.1| flagellar basal-body rod protein FlgC [Clostridium botulinum A str.
           ATCC 19397]
 gi|152933781|gb|ABS39280.1| flagellar basal-body rod protein FlgC [Clostridium botulinum A str.
           Hall]
          Length = 144

 Score =  104 bits (258), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 44/144 (30%), Positives = 61/144 (42%), Gaps = 11/144 (7%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR-----------KTI 49
           M     +  I+ SGL+ +  RM  I+ NI+NA TT    G    R+              
Sbjct: 1   MIKAFDTMRISASGLSAERLRMDTIASNISNATTTRTENGGPYKRKIAVFEENLNNELNK 60

Query: 50  SFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNR 109
                     GV+   I  D S   + +DP HP A+  G V  PNVNVL E ADM  + R
Sbjct: 61  KNGATEKKLYGVKATGIVEDPSPVRKMYDPSHPDADEEGYVSMPNVNVLNEMADMMASVR 120

Query: 110 LYMANLQTIKQSHDMMTTTLDLLR 133
            Y AN+  +     M    L++ +
Sbjct: 121 TYEANVTVMNAEKSMFGKALEIGK 144


>gi|159045788|ref|YP_001534582.1| flagellar basal body rod protein FlgC [Dinoroseobacter shibae DFL
           12]
 gi|157913548|gb|ABV94981.1| flagellar basal-body rod protein FlgC [Dinoroseobacter shibae DFL
           12]
          Length = 130

 Score =  104 bits (258), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 44/133 (33%), Positives = 73/133 (54%), Gaps = 4/133 (3%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M  L+ S  ++ SGL  Q+ R+ ++S+NIAN  T G       +++      +   G+ G
Sbjct: 1   MGDLLKSMTVSASGLMAQAQRLNVVSQNIANVDTPGYQRKQAEFQQ----MFDTFDGTDG 56

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V V ++ +D S     +DP HP+A+ +G  +  NV+ +VE AD RE  R Y ANL++   
Sbjct: 57  VAVLRVSLDDSALKRIYDPSHPLADPTGYYEGSNVSTMVEVADAREAQRSYEANLRSFDN 116

Query: 121 SHDMMTTTLDLLR 133
           +  M  + L+LL+
Sbjct: 117 ARQMSRSLLELLK 129


>gi|91976172|ref|YP_568831.1| flagellar basal body rod protein FlgC [Rhodopseudomonas palustris
           BisB5]
 gi|91682628|gb|ABE38930.1| flagellar basal-body rod protein FlgC [Rhodopseudomonas palustris
           BisB5]
          Length = 141

 Score =  104 bits (258), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 59/134 (44%), Positives = 79/134 (58%), Gaps = 3/134 (2%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
               S  IA SGL  Q+ RM++ISENIANA +T  T G DPYRRK  +F   +  S   R
Sbjct: 7   DFARSMGIATSGLRAQAGRMRVISENIANAESTAQTAGGDPYRRKVPTFTSALDRSLDAR 66

Query: 63  VK---KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
                ++  D S F  +++P +P A+A+G VKYPNVN ++E  DMR   R Y ANL  I 
Sbjct: 67  TVALGRVKPDTSAFRVKYEPTNPSADAAGNVKYPNVNSVIEMTDMRNAQRSYEANLNVIS 126

Query: 120 QSHDMMTTTLDLLR 133
            +  M+  TLD+L+
Sbjct: 127 ATRRMIQRTLDILK 140


>gi|307731365|ref|YP_003908589.1| flagellar basal-body rod protein FlgC [Burkholderia sp. CCGE1003]
 gi|307585900|gb|ADN59298.1| flagellar basal-body rod protein FlgC [Burkholderia sp. CCGE1003]
          Length = 141

 Score =  104 bits (258), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 38/140 (27%), Positives = 68/140 (48%), Gaps = 8/140 (5%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M  L+    +A S ++ QS R+ + + N+ANA +T    G     ++ +     + G+  
Sbjct: 1   MPSLMNIFGVAGSAMSAQSQRLNVTASNLANADSTTGPDGQPYKAKQVVFAVAPLGGART 60

Query: 61  VRVKKIG--------VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
              +++G         D +     +DPG+P ANA G V  PNV+ + E  +M   +R Y 
Sbjct: 61  GSGQQVGGVQVTGVVDDPTPMKTAYDPGNPAANADGYVTLPNVDPVQEMVNMISASRSYQ 120

Query: 113 ANLQTIKQSHDMMTTTLDLL 132
           AN++T+  +  +M  TL + 
Sbjct: 121 ANVETLNTAKTLMLKTLTIG 140


>gi|269836584|ref|YP_003318812.1| flagellar basal-body rod protein FlgC [Sphaerobacter thermophilus
           DSM 20745]
 gi|269785847|gb|ACZ37990.1| flagellar basal-body rod protein FlgC [Sphaerobacter thermophilus
           DSM 20745]
          Length = 154

 Score =  104 bits (258), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 38/153 (24%), Positives = 61/153 (39%), Gaps = 21/153 (13%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF---------- 51
             +  +  ++ SGL  Q  RM +I+ NIAN  TT    G    RR+ +            
Sbjct: 1   MSIFETMRVSMSGLTAQRLRMDVIASNIANVDTTRTPEGGPYRRRQVVFTAVPATDSRPS 60

Query: 52  -----------EEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVE 100
                      +   +   GV V  I  D       ++P HP A+  G V  P+++V+ E
Sbjct: 61  AGGFQRVLAPVDPQSNAGQGVAVTAIRTDPDAVRRVYEPDHPDADEEGFVLRPDIDVITE 120

Query: 101 TADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             D+   +R Y AN+  +     M +  L + R
Sbjct: 121 MTDLLAASRAYEANVTVLNAVKAMASRALTIGR 153


>gi|330811237|ref|YP_004355699.1| flagellar basal-body rod protein [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327379345|gb|AEA70695.1| Putative flagellar basal-body rod protein [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 147

 Score =  104 bits (258), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 43/147 (29%), Positives = 67/147 (45%), Gaps = 15/147 (10%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS----------- 50
             + +  +IA S ++ Q+ R+  ++ NIANA T   +       R  +            
Sbjct: 1   MSIASVFNIAGSAMSAQTTRLNTVASNIANAETVSSSIDQTYRARHPVFATMFQGGQSGG 60

Query: 51  ----FEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
               F+E      GV+V  +  DQS     ++P HP A+A G V YPNVNV+ E ADM  
Sbjct: 61  SDSLFQEQDAAGQGVQVLGVVEDQSNLEARYEPNHPAADAKGYVYYPNVNVVEEMADMIS 120

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
            +R +  N + +  +  MM   L L +
Sbjct: 121 ASRSFQTNAEMMNTAKTMMQKVLTLGQ 147


>gi|319649569|ref|ZP_08003725.1| flagellar basal-body rod protein C [Bacillus sp. 2_A_57_CT2]
 gi|317398731|gb|EFV79413.1| flagellar basal-body rod protein C [Bacillus sp. 2_A_57_CT2]
          Length = 150

 Score =  104 bits (258), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 46/150 (30%), Positives = 64/150 (42%), Gaps = 18/150 (12%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRK-------------- 47
             +  S +   S L  Q  RM +IS N+ANA +T    G  PYRRK              
Sbjct: 1   MSMFHSMNNTASALTAQRLRMDVISSNMANADSTRSVNGDGPYRRKSVVLEPKEGQFSSF 60

Query: 48  ---TISFEEVMHGSGGVRVKKIGVD-QSTFVEEFDPGHPVANASGIVKYPNVNVLVETAD 103
               +S         GV+V +I  D ++     +DP H  AN  G V+ PNV+ L E  D
Sbjct: 61  LNMAMSRRGESSAGNGVKVSRIVEDRETPTKMVYDPTHADANEDGYVEMPNVDPLREMTD 120

Query: 104 MRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +    R Y AN+     S  MM   L++ +
Sbjct: 121 LISATRSYEANVTVFNASKGMMMKALEIGK 150


>gi|313905141|ref|ZP_07838510.1| flagellar basal-body rod protein FlgC [Eubacterium cellulosolvens
           6]
 gi|313470044|gb|EFR65377.1| flagellar basal-body rod protein FlgC [Eubacterium cellulosolvens
           6]
          Length = 151

 Score =  104 bits (258), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 42/151 (27%), Positives = 61/151 (40%), Gaps = 19/151 (12%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR--------------- 46
              + S  I+ SG++ Q  R+ I +ENIAN  TT    G    R+               
Sbjct: 1   MSFLDSFDISASGMSAQRIRLDIAAENIANVDTTRTENGGPYIRKDVVLASYGKKTTFAN 60

Query: 47  ----KTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETA 102
                      +  G  GVRV  I  D       ++P HP A+ +G V+ PNV+V  ET 
Sbjct: 61  ALRAARTGSSVISTGKRGVRVAGITDDTRETKRVYNPTHPDADVNGYVEMPNVDVTKETV 120

Query: 103 DMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           D     R Y AN+  +     M    +D+ +
Sbjct: 121 DAMSATRSYEANVTALNAIKMMTQKAMDIGK 151


>gi|89902475|ref|YP_524946.1| flagellar basal-body rod protein FlgC [Rhodoferax ferrireducens
           T118]
 gi|89347212|gb|ABD71415.1| flagellar basal-body rod protein FlgC [Rhodoferax ferrireducens
           T118]
          Length = 134

 Score =  104 bits (258), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 33/134 (24%), Positives = 62/134 (46%), Gaps = 2/134 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM--HGSG 59
             + +  +++ S ++ QS R+ +++ N+ANA       G     R+ +     M    S 
Sbjct: 1   MSMFSIFNVSGSAISAQSQRLNVVASNLANADAVAGPDGQGYKGRQVVFETVPMGSDASS 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GVRV  +        +  +P HP A+A G V   NVN + E  +M   +R Y  N++ + 
Sbjct: 61  GVRVSSVSESNEPLRKVHNPSHPSADADGYVTQSNVNPIEEMVNMISASRSYQNNVEVMN 120

Query: 120 QSHDMMTTTLDLLR 133
            +  ++  TL + +
Sbjct: 121 TAKTLLLKTLQMGQ 134


>gi|225375315|ref|ZP_03752536.1| hypothetical protein ROSEINA2194_00940 [Roseburia inulinivorans DSM
           16841]
 gi|225212804|gb|EEG95158.1| hypothetical protein ROSEINA2194_00940 [Roseburia inulinivorans DSM
           16841]
          Length = 146

 Score =  104 bits (258), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 39/146 (26%), Positives = 67/146 (45%), Gaps = 14/146 (9%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR-------------KT 48
             L  +  I+ SG+  +  RM  I+ENIAN  TT    G+   R+             + 
Sbjct: 1   MALFQAFDISASGMTAERFRMDTIAENIANVNTTRTEDGTPYRRKIVTFAEKEVTSFSRY 60

Query: 49  ISFEEVMHGSGGVRVKKIGVD-QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                      GV+V  +  D ++ F+ E+DP +P A+ +G V YPNVN + E  ++ + 
Sbjct: 61  YQNARSKFVGNGVKVSSVKEDTETDFIMEYDPSNPDADENGYVSYPNVNTVTEMTNLIDA 120

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
           +R Y AN    + +  +  + L + +
Sbjct: 121 SRAYEANTTAFEAAKSIAQSGLSIGK 146


>gi|158422260|ref|YP_001523552.1| flagellar basal body rod protein FlgC [Azorhizobium caulinodans ORS
           571]
 gi|158329149|dbj|BAF86634.1| flagellar basal-body rod protein [Azorhizobium caulinodans ORS 571]
          Length = 140

 Score =  104 bits (258), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 75/136 (55%), Positives = 99/136 (72%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           +D L  +  IA SGL VQ+ RM+++SEN+AN R+TG TPG+DPY RKTI F+  +  + G
Sbjct: 2   IDPLKVAGQIAGSGLQVQAQRMRVVSENLANMRSTGSTPGADPYTRKTIQFQAELDRTLG 61

Query: 61  V---RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
               +VK +GVDQ+ F+ E+DPG+P A+ SG+VK PNVN+L E ADMRE NR Y ANLQ 
Sbjct: 62  ASNVKVKSLGVDQAPFLTEYDPGNPAADESGMVKLPNVNMLTEMADMREANRSYEANLQM 121

Query: 118 IKQSHDMMTTTLDLLR 133
           IKQ+  M+  T+DLLR
Sbjct: 122 IKQTRSMVAMTVDLLR 137


>gi|118474843|ref|YP_891880.1| flagellar basal body rod protein FlgC [Campylobacter fetus subsp.
           fetus 82-40]
 gi|118414069|gb|ABK82489.1| flagellar basal-body rod protein FlgC [Campylobacter fetus subsp.
           fetus 82-40]
          Length = 164

 Score =  104 bits (258), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 49/164 (29%), Positives = 69/164 (42%), Gaps = 32/164 (19%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-- 58
           M YL     I+  GL+ Q  RM +IS NIANA TT    G    RR+ I           
Sbjct: 1   MAYLSD-FDISGYGLSAQRFRMNVISSNIANANTTRTAEGGPYRRREVIFKAIEFDKELN 59

Query: 59  -----------------------------GGVRVKKIGVDQSTFVEEFDPGHPVANASGI 89
                                          V V KI  D   F  ++DP HP A+A G 
Sbjct: 60  KSINSKNDFLKNENPLNDPDAPEFPKPALMSVVVDKIVRDDKDFKLKYDPTHPDADAKGY 119

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  PN+N ++E AD+ E  R Y AN+   + +  + T+ ++LL+
Sbjct: 120 IMLPNINPVIEMADLIEATRAYQANVSAFQSAKSIATSAIELLK 163


>gi|28897550|ref|NP_797155.1| flagellar basal body rod protein FlgC [Vibrio parahaemolyticus RIMD
           2210633]
 gi|153839687|ref|ZP_01992354.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus
           AQ3810]
 gi|260364609|ref|ZP_05777211.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus
           K5030]
 gi|260878286|ref|ZP_05890641.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus
           AN-5034]
 gi|260898116|ref|ZP_05906612.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus
           Peru-466]
 gi|260901951|ref|ZP_05910346.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus
           AQ4037]
 gi|5361006|gb|AAD42913.1|U12817_7 polar flagellar FlgC homolog [Vibrio parahaemolyticus]
 gi|28805762|dbj|BAC59039.1| polar flagellar FlgC [Vibrio parahaemolyticus RIMD 2210633]
 gi|149746797|gb|EDM57785.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus
           AQ3810]
 gi|308086105|gb|EFO35800.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus
           Peru-466]
 gi|308090161|gb|EFO39856.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus
           AN-5034]
 gi|308106781|gb|EFO44321.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus
           AQ4037]
 gi|308115115|gb|EFO52655.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus
           K5030]
 gi|328473455|gb|EGF44303.1| flagellar basal body rod protein FlgC [Vibrio parahaemolyticus
           10329]
          Length = 137

 Score =  104 bits (258), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 38/137 (27%), Positives = 62/137 (45%), Gaps = 5/137 (3%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG- 60
             L    ++  S ++ +S R+   S N+ANA +   +       R  +   E+ +   G 
Sbjct: 1   MSLFNVFNVTGSAMSAESVRLNTTSSNLANADSVSSSAKDTYKARHAVFGAELSNAMRGG 60

Query: 61  ----VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
               V+V  I         E++P HP+AN  G +  PNVNV+ E A+M   +R Y  N+Q
Sbjct: 61  DTVPVKVLGIVESDKPLSAEYNPDHPLANDEGYIYKPNVNVMEEMANMISASRAYQTNVQ 120

Query: 117 TIKQSHDMMTTTLDLLR 133
               S  M+  TL + +
Sbjct: 121 VADSSKQMLLRTLQMGQ 137


>gi|56964036|ref|YP_175767.1| flagellar basal body rod protein FlgC [Bacillus clausii KSM-K16]
 gi|56910279|dbj|BAD64806.1| flagellar basal-body rod protein FlgC [Bacillus clausii KSM-K16]
          Length = 148

 Score =  104 bits (258), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 43/148 (29%), Positives = 66/148 (44%), Gaps = 16/148 (10%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGD---TPGSDPYRRKTISF------- 51
             + +S +++ SGL +Q  RM + + NIANA TT          PY+R+ +         
Sbjct: 1   MTMFSSMNVSGSGLTLQRLRMDVAASNIANADTTRAERVNGEWQPYQRRMVVQGPTSMGR 60

Query: 52  ------EEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
                 +       GV  K+I  D +     +DP HP AN  G V  PNV +  E  D+ 
Sbjct: 61  FSSDLQKATAELDQGVVAKQIVRDPTPATLVYDPAHPDANEDGYVSKPNVEIAREMVDIT 120

Query: 106 ETNRLYMANLQTIKQSHDMMTTTLDLLR 133
              R Y AN+  ++ S  M+   L++ R
Sbjct: 121 SATRSYEANVTALQASKGMVMKALEIGR 148


>gi|167645332|ref|YP_001682995.1| flagellar basal body rod protein FlgC [Caulobacter sp. K31]
 gi|167347762|gb|ABZ70497.1| flagellar basal-body rod protein FlgC [Caulobacter sp. K31]
          Length = 140

 Score =  104 bits (258), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 59/131 (45%), Positives = 77/131 (58%), Gaps = 2/131 (1%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV- 63
           +A+  IA S L  Q  RM++I+ENIANA +T    G DPYRR+   F+      GG  V 
Sbjct: 9   MATMAIAASALKAQQGRMRVIAENIANANSTARVAGGDPYRRQVPVFKPTTLKGGGEGVV 68

Query: 64  -KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
             K+  D   F   +DPG+P A+A G VK PNV+ LVE  DM+E  R Y AN+  I+ S 
Sbjct: 69  MAKVDPDMKDFGTAYDPGNPAADAKGYVKLPNVDTLVEALDMKEAQRAYEANMNVIETSR 128

Query: 123 DMMTTTLDLLR 133
            M + TLD+LR
Sbjct: 129 AMESRTLDILR 139


>gi|260767771|ref|ZP_05876706.1| flagellar basal-body rod protein FlgC [Vibrio furnissii CIP 102972]
 gi|260617280|gb|EEX42464.1| flagellar basal-body rod protein FlgC [Vibrio furnissii CIP 102972]
 gi|315179397|gb|ADT86311.1| flagellar basal-body rod protein FlgC [Vibrio furnissii NCTC 11218]
          Length = 138

 Score =  104 bits (258), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 38/138 (27%), Positives = 61/138 (44%), Gaps = 6/138 (4%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM------ 55
             L    ++  S ++ +S R+   S N+ANA +   +       R  +   E+       
Sbjct: 1   MSLFNVFNVTGSAMSAESVRLNTTSSNLANADSVSSSAKDTYKARHAVFGAELSKARYNR 60

Query: 56  HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
             +  V+V  I         EF+P HP+AN  G +  PNVNV+ E A+M   +R Y  N+
Sbjct: 61  DPNVPVKVLGIVESDKPLNAEFNPDHPLANDEGYIYKPNVNVMEEMANMISASRSYQTNV 120

Query: 116 QTIKQSHDMMTTTLDLLR 133
           Q    S  M+  TL + +
Sbjct: 121 QVADASKQMLLRTLQMGQ 138


>gi|209521587|ref|ZP_03270285.1| flagellar basal-body rod protein FlgC [Burkholderia sp. H160]
 gi|209497970|gb|EDZ98127.1| flagellar basal-body rod protein FlgC [Burkholderia sp. H160]
          Length = 141

 Score =  104 bits (258), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 41/140 (29%), Positives = 70/140 (50%), Gaps = 8/140 (5%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-- 58
           M  L+    +A S ++ QS R+ + + N+ANA +T    G     ++ +     + G+  
Sbjct: 1   MPSLMNIFGVAGSAMSAQSERLNVTASNLANADSTTGPDGQPYKAKQVVFAVNPLGGARS 60

Query: 59  ------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
                 GGV+V  +  D S     ++PG+P ANA G V  PNV+ + E  +M   +R Y 
Sbjct: 61  GSGQQVGGVQVTGVVDDPSPMKTAYEPGNPAANADGYVTLPNVDPVQEMVNMISASRSYQ 120

Query: 113 ANLQTIKQSHDMMTTTLDLL 132
           AN++T+  +  +M  TL + 
Sbjct: 121 ANVETLNTAKTLMLKTLTIG 140


>gi|163738064|ref|ZP_02145480.1| flagellar basal-body rod protein FlgC [Phaeobacter gallaeciensis
           BS107]
 gi|163742540|ref|ZP_02149926.1| flagellar basal-body rod protein FlgC [Phaeobacter gallaeciensis
           2.10]
 gi|161384125|gb|EDQ08508.1| flagellar basal-body rod protein FlgC [Phaeobacter gallaeciensis
           2.10]
 gi|161388680|gb|EDQ13033.1| flagellar basal-body rod protein FlgC [Phaeobacter gallaeciensis
           BS107]
          Length = 130

 Score =  104 bits (258), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 45/133 (33%), Positives = 72/133 (54%), Gaps = 4/133 (3%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M     S  ++ S L  Q++R++ +SENI+NA T G    + P+        +V     G
Sbjct: 1   MSEFSKSLSVSASALKAQASRLRHVSENISNADTPGYRRKTVPFEAVRDLRSDVEKVEVG 60

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
                + +D+S   + FDP HP+A+ SG  +  NV++++E AD RE  R Y ANL+  +Q
Sbjct: 61  P----VRLDRSDLEQVFDPSHPLADESGHYEGSNVDLMIEIADAREAQRSYEANLKMFEQ 116

Query: 121 SHDMMTTTLDLLR 133
              M ++ +DLLR
Sbjct: 117 GRQMSSSLMDLLR 129


>gi|209545549|ref|YP_002277778.1| flagellar basal body rod protein FlgC [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|209533226|gb|ACI53163.1| flagellar basal-body rod protein FlgC [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 135

 Score =  104 bits (258), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 56/135 (41%), Positives = 83/135 (61%), Gaps = 3/135 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
                +  ++ +G+  Q  R+++ +EN+AN  TTG T G+DPYRRKTI+F+  +  + GV
Sbjct: 1   MDFSDTIGVSAAGMRAQEERLRVAAENLANKDTTGSTRGADPYRRKTITFQATLDQASGV 60

Query: 62  ---RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
              +VK IG D + F  ++DP HP A+A G VK PNVN +VE  D  E    Y ANL T+
Sbjct: 61  SSVKVKGIGQDNTPFQTKYDPSHPAADAKGYVKMPNVNSMVEIMDTHEAQHSYEANLNTM 120

Query: 119 KQSHDMMTTTLDLLR 133
           + S  M T T++L++
Sbjct: 121 QISRSMATRTINLIK 135


>gi|34557980|ref|NP_907795.1| flagellar basal body rod protein FlgC [Wolinella succinogenes DSM
           1740]
 gi|34483698|emb|CAE10695.1| FLAGELLAR BASAL-BODY ROD PROTEIN FLGC PROXIMAL ROD PROTEIN
           [Wolinella succinogenes]
          Length = 164

 Score =  103 bits (257), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 49/163 (30%), Positives = 74/163 (45%), Gaps = 31/163 (19%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR----KTISFEEVMHG 57
              ++S  I+  GL+ Q  R+ +IS NIANA TT    G    R+    K   F+EV++ 
Sbjct: 1   MAFLSSFDISGYGLSAQRFRVNMISSNIANANTTRTDEGGPYRRKEVIFKAFDFDEVLNQ 60

Query: 58  SGGVR---------------------------VKKIGVDQSTFVEEFDPGHPVANASGIV 90
             G                             V K+  D S    +++P HP AN+ G V
Sbjct: 61  KLGENNNLLKYEDPLDEDEWGLEPKPSIMSVYVDKVVRDDSQPRMKYEPSHPDANSEGYV 120

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            YPN+N +VE AD+ E  R Y AN+   + + +M +T L + +
Sbjct: 121 AYPNINPVVEMADLIEATRAYQANVSAFQSAKNMASTALTMFQ 163


>gi|323139652|ref|ZP_08074694.1| flagellar basal-body rod protein FlgC [Methylocystis sp. ATCC
           49242]
 gi|322395084|gb|EFX97643.1| flagellar basal-body rod protein FlgC [Methylocystis sp. ATCC
           49242]
          Length = 139

 Score =  103 bits (257), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 77/135 (57%), Positives = 101/135 (74%), Gaps = 3/135 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
           D L AS  +A +GLA QSAR++I+SEN+ANA++TG+TPG+DPY RKTISF   +  + GV
Sbjct: 3   DPLDASLKVAGAGLAAQSARLRIVSENMANAQSTGNTPGADPYVRKTISFANELDRASGV 62

Query: 62  R---VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
           R   V +IGVD + F  E DPG+P A+A+G VK PNVN+LVE  DMRE NR Y A+LQ +
Sbjct: 63  RLVRVNQIGVDPTPFTIEHDPGNPAADANGDVKRPNVNLLVEMGDMREANRAYEADLQVM 122

Query: 119 KQSHDMMTTTLDLLR 133
           KQS D++  T+DLL+
Sbjct: 123 KQSRDLIAMTVDLLK 137


>gi|187925763|ref|YP_001897405.1| flagellar basal body rod protein FlgC [Burkholderia phytofirmans
           PsJN]
 gi|187716957|gb|ACD18181.1| flagellar basal-body rod protein FlgC [Burkholderia phytofirmans
           PsJN]
          Length = 141

 Score =  103 bits (257), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 38/140 (27%), Positives = 68/140 (48%), Gaps = 8/140 (5%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M  L+    +A S ++ QS R+ + + N+ANA +T    G     ++ +     + G+  
Sbjct: 1   MPSLMNIFGVAGSAMSAQSQRLNVTASNLANADSTTGPDGQPYKAKQVVFAVSPLGGART 60

Query: 61  --------VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
                   V+V  +  D +     +DPG+P AN+ G V  PNV+ + E  +M   +R Y 
Sbjct: 61  ASGQQVGGVQVTGVVDDPTPMKTAYDPGNPAANSDGYVTLPNVDPVQEMVNMISASRSYQ 120

Query: 113 ANLQTIKQSHDMMTTTLDLL 132
           AN++T+  +  +M  TL + 
Sbjct: 121 ANVETLNTAKTLMLKTLTIG 140


>gi|295696111|ref|YP_003589349.1| flagellar basal-body rod protein FlgC [Bacillus tusciae DSM 2912]
 gi|295411713|gb|ADG06205.1| flagellar basal-body rod protein FlgC [Bacillus tusciae DSM 2912]
          Length = 155

 Score =  103 bits (257), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 50/150 (33%), Positives = 67/150 (44%), Gaps = 22/150 (14%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPG-SDPYRRKTISFEEVMHGSG----- 59
            +  I+ SGL+ Q  RM +I+ NIANA TT    G   PYRR+ +  E            
Sbjct: 5   DTFAISGSGLSAQRLRMDVIAGNIANADTTRRPDGTPGPYRRRMVVMEPQPAPGSFAAAL 64

Query: 60  ----------GVRVKKIGVDQSTFVEEFDPGHPVANAS------GIVKYPNVNVLVETAD 103
                     GVRV  I  D S F  ++DP +P A  +      G V+ PNV+V  E  D
Sbjct: 65  ASAGGTGVPEGVRVSAIVEDPSPFQLKYDPSNPDAVQNPASPLYGYVQLPNVDVATEMVD 124

Query: 104 MRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +   +R Y AN+  +     M    LDL R
Sbjct: 125 LISASRAYEANVTALDAGKMMAVKALDLGR 154


>gi|209695764|ref|YP_002263694.1| flagellar basal body rod protein FlgC [Aliivibrio salmonicida
           LFI1238]
 gi|208009717|emb|CAQ80021.1| flagellar basal-body rod protein FlgC [Aliivibrio salmonicida
           LFI1238]
          Length = 138

 Score =  103 bits (257), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 39/138 (28%), Positives = 63/138 (45%), Gaps = 6/138 (4%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV------M 55
             L    ++A S ++ +S R+   S N+ANA +   +       R  I   E+       
Sbjct: 1   MSLFNVFNVAGSAMSAESVRLNTTSSNMANADSVSSSASETYKARHAIFGAELSKAKYKQ 60

Query: 56  HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
             +  V+V  I   Q     E++P HP+AN  G +  PNVNV+ E A+M   +R Y  N+
Sbjct: 61  DFTVPVKVLGIVESQKPLRAEYNPDHPMANDDGYIFKPNVNVMEEMANMISASRSYQTNV 120

Query: 116 QTIKQSHDMMTTTLDLLR 133
           Q       M+ +TL + +
Sbjct: 121 QVADAGKQMLQSTLRMGQ 138


>gi|295690698|ref|YP_003594391.1| flagellar basal-body rod protein FlgC [Caulobacter segnis ATCC
           21756]
 gi|295432601|gb|ADG11773.1| flagellar basal-body rod protein FlgC [Caulobacter segnis ATCC
           21756]
          Length = 139

 Score =  103 bits (257), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 58/120 (48%), Positives = 79/120 (65%), Gaps = 1/120 (0%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRK-TISFEEVMHGSGGVRVKKIGVDQSTF 73
           L  Q  RM++I+ENIANA +T  T G DPYRR+  I     + G+ GV++ ++  DQS F
Sbjct: 19  LRAQQGRMRVIAENIANANSTATTAGGDPYRRQLPIFRPTKVQGAEGVQMVRVDPDQSDF 78

Query: 74  VEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             E+DPG+P A+A+G VK PNVN LVE  DM+E  R Y ANL  I+ +  M + TLD+L+
Sbjct: 79  KTEYDPGNPAADANGYVKLPNVNSLVEALDMKEAQRAYEANLNVIETARVMESRTLDILK 138


>gi|92114100|ref|YP_574028.1| flagellar basal-body rod protein FlgC [Chromohalobacter salexigens
           DSM 3043]
 gi|91797190|gb|ABE59329.1| flagellar basal-body rod protein FlgC [Chromohalobacter salexigens
           DSM 3043]
          Length = 135

 Score =  103 bits (257), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 40/134 (29%), Positives = 67/134 (50%), Gaps = 2/134 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--G 59
             + +   I++S ++ QS RM   + N+ANA +     G     +  +   +   GS  G
Sbjct: 1   MSMFSIFDISSSAMSAQSQRMNATASNMANADSVAGPDGEPYRAKHVMFQAQSQGGSELG 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GVR  ++  D +    E+ PGHP+A+  G V  PNV+ + E  DM   +R Y AN++ + 
Sbjct: 61  GVRATEVVEDDAPPRMEYRPGHPLADEDGYVAMPNVDPVDEMVDMIAASRSYQANVEVMN 120

Query: 120 QSHDMMTTTLDLLR 133
            S  +M  TL + +
Sbjct: 121 TSKSLMQQTLSIGQ 134


>gi|254476330|ref|ZP_05089716.1| flagellar basal-body rod protein FlgC [Ruegeria sp. R11]
 gi|214030573|gb|EEB71408.1| flagellar basal-body rod protein FlgC [Ruegeria sp. R11]
          Length = 130

 Score =  103 bits (257), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 48/133 (36%), Positives = 72/133 (54%), Gaps = 4/133 (3%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M     S  I+ S L  QS R++ +SENI+NA T G    + P+        +V   S G
Sbjct: 1   MSEFAKSLSISASALQAQSTRLRHVSENISNADTPGYRRKTVPFEAVRDLSADVEKVSVG 60

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
                + +D+S   + +DP HP+A+ SG  K  NV++++E AD RE  R Y ANL+  +Q
Sbjct: 61  P----VRLDRSDLEQVYDPSHPLADDSGHYKGSNVDLMIEIADAREAQRSYEANLKMFEQ 116

Query: 121 SHDMMTTTLDLLR 133
              M ++ +DLLR
Sbjct: 117 GRQMSSSLMDLLR 129


>gi|153953776|ref|YP_001394541.1| flagellar basal body rod protein FlgC [Clostridium kluyveri DSM
           555]
 gi|219854392|ref|YP_002471514.1| hypothetical protein CKR_1049 [Clostridium kluyveri NBRC 12016]
 gi|146346657|gb|EDK33193.1| FlgC [Clostridium kluyveri DSM 555]
 gi|219568116|dbj|BAH06100.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 143

 Score =  103 bits (257), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 47/143 (32%), Positives = 66/143 (46%), Gaps = 10/143 (6%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM----- 55
           M     +  I+ SGL+ +  RM  I+ N+AN  TT    G+   R+  +  E +      
Sbjct: 1   MIQAFNTLRISASGLSAERLRMDTIASNMANVETTKGADGNPYRRKIAVFQENLQKQLNK 60

Query: 56  -----HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRL 110
                + S GV+   I  D S F   +DP +  A+A G V  PNVN+L E ADM    R 
Sbjct: 61  AGRYENVSQGVKAVGIVEDNSEFKRVYDPTNADADADGYVSMPNVNILNEMADMMVAVRS 120

Query: 111 YMANLQTIKQSHDMMTTTLDLLR 133
           Y ANL  I     M +  LD+ +
Sbjct: 121 YEANLSAISAEKSMFSKALDIGK 143


>gi|126444366|ref|YP_001061244.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           668]
 gi|134280640|ref|ZP_01767350.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           305]
 gi|254299688|ref|ZP_04967137.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           406e]
 gi|125657216|gb|ABN48704.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei]
 gi|126223857|gb|ABN87362.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           668]
 gi|134247662|gb|EBA47746.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           305]
 gi|157809503|gb|EDO86673.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           406e]
          Length = 138

 Score =  103 bits (257), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 38/138 (27%), Positives = 61/138 (44%), Gaps = 6/138 (4%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
                 A IA S ++ Q+ R+  I+ N+ANA +   T  +    RK +        + G 
Sbjct: 1   MSFKDIAQIAGSAMSAQTVRLNTIASNLANADSASGTEDATYRARKPVFASIFQLDAQGE 60

Query: 62  ------RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
                 +V  +        +   PGHP+A+A G V YPNVN + E  DM   +R Y  N+
Sbjct: 61  PRGAAVQVLDVVKSTEPLRKVHQPGHPLADAEGNVLYPNVNPVEEMTDMLSASRAYSTNV 120

Query: 116 QTIKQSHDMMTTTLDLLR 133
           + + + + M    L L +
Sbjct: 121 EVLGRVNGMQLELLKLGQ 138


>gi|300854206|ref|YP_003779190.1| flagellar basal-body rod protein FlgC [Clostridium ljungdahlii DSM
           13528]
 gi|300434321|gb|ADK14088.1| flagellar basal-body rod protein FlgC [Clostridium ljungdahlii DSM
           13528]
          Length = 143

 Score =  103 bits (257), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 54/144 (37%), Positives = 70/144 (48%), Gaps = 12/144 (8%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM----- 55
           M     +  I+ SGL+ +   M  I+ N+ANA TT    G  PYRRK   F E +     
Sbjct: 1   MIQAFNTMRISASGLSAERLSMDTIASNMANAETTRGADGQ-PYRRKVAVFGENLSKALD 59

Query: 56  ------HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNR 109
                     GV+V  I  D S F  E+DP +P A+ASG V  PNVN+L E ADM    R
Sbjct: 60  SNGNYGDVPEGVKVVAIKDDTSPFKREYDPTNPDADASGYVSMPNVNILNEMADMMVATR 119

Query: 110 LYMANLQTIKQSHDMMTTTLDLLR 133
            Y ANL  I     M +  L++ +
Sbjct: 120 AYEANLSAINSEKSMFSKALEIGK 143


>gi|295678060|ref|YP_003606584.1| flagellar basal-body rod protein FlgC [Burkholderia sp. CCGE1002]
 gi|295437903|gb|ADG17073.1| flagellar basal-body rod protein FlgC [Burkholderia sp. CCGE1002]
          Length = 141

 Score =  103 bits (257), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 42/140 (30%), Positives = 69/140 (49%), Gaps = 8/140 (5%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM----- 55
           M  L+    +A S ++ QS R+ + + N+ANA +T    G     ++ I     +     
Sbjct: 1   MPSLMNIFGVAGSAMSAQSERLNVTASNLANADSTTGPDGQPYKAKQVIFAVNPIGGART 60

Query: 56  ---HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
                 GGVRV  +  D S     +DPG+P A+A+G V  PNV+ + E  +M   +R Y 
Sbjct: 61  RSGQQVGGVRVTGVVDDPSPMKTAYDPGNPAADANGYVTLPNVDPVQEMVNMISASRSYQ 120

Query: 113 ANLQTIKQSHDMMTTTLDLL 132
           AN++T+  +  +M  TL + 
Sbjct: 121 ANVETLNTAKTLMLKTLTIG 140


>gi|163850061|ref|YP_001638104.1| flagellar basal body rod protein FlgC [Methylobacterium extorquens
           PA1]
 gi|218528664|ref|YP_002419480.1| flagellar basal body rod protein FlgC [Methylobacterium
           chloromethanicum CM4]
 gi|240137195|ref|YP_002961664.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
           [Methylobacterium extorquens AM1]
 gi|254559207|ref|YP_003066302.1| cell-proximal portion of basal-body rod biosynthesis protein
           [Methylobacterium extorquens DM4]
 gi|163661666|gb|ABY29033.1| flagellar basal-body rod protein FlgC [Methylobacterium extorquens
           PA1]
 gi|218520967|gb|ACK81552.1| flagellar basal-body rod protein FlgC [Methylobacterium
           chloromethanicum CM4]
 gi|240007161|gb|ACS38387.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
           [Methylobacterium extorquens AM1]
 gi|254266485|emb|CAX22249.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
           [Methylobacterium extorquens DM4]
          Length = 138

 Score =  103 bits (257), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 68/137 (49%), Positives = 100/137 (72%), Gaps = 3/137 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           +D L++++ +A++GL  QS RM+++SEN+ANA++TG TPG+DPY RKT++F   +  + G
Sbjct: 2   IDPLLSASRLASAGLEAQSLRMRVVSENLANAQSTGATPGADPYARKTVTFRAELDRAAG 61

Query: 61  V---RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           V   R+++IG D + F  E DP +  A+A+G VK PNVN+LVE ADMRE NR Y ANLQ 
Sbjct: 62  VASVRLREIGTDNAPFRTEHDPANAAADANGNVKLPNVNMLVEMADMREANRSYEANLQV 121

Query: 118 IKQSHDMMTTTLDLLRD 134
           IKQ+  M+ + +DLL+ 
Sbjct: 122 IKQARAMVASVIDLLKS 138


>gi|78355402|ref|YP_386851.1| flagellar basal-body rod protein FlgC [Desulfovibrio desulfuricans
           subsp. desulfuricans str. G20]
 gi|78217807|gb|ABB37156.1| flagellar basal-body rod protein FlgC [Desulfovibrio desulfuricans
           subsp. desulfuricans str. G20]
          Length = 146

 Score =  103 bits (257), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 47/147 (31%), Positives = 74/147 (50%), Gaps = 14/147 (9%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-- 58
           MD++  +  I  S L+ +   M I S N+ANA+TT    G    R+  +     +     
Sbjct: 1   MDFMT-ALDIGASALSAERTSMNITSMNLANAKTTRTIGGGPYRRKAVVMAATEVDDPFS 59

Query: 59  -----------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                       GVRV+ I  D   F + ++PGHP A+A+G VKYP++NV+ E A++  +
Sbjct: 60  KHMQSALDRELRGVRVQHIVRDNRPFRQVYEPGHPDADANGYVKYPDINVVEEMANLMTS 119

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLRD 134
            R Y A++ TI+    M T  L++ R 
Sbjct: 120 QRGYQASVSTIEAVKSMYTKALEIGRS 146


>gi|167576660|ref|ZP_02369534.1| flagellar basal-body rod protein FlgC [Burkholderia thailandensis
           TXDOH]
          Length = 138

 Score =  103 bits (256), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 37/138 (26%), Positives = 58/138 (42%), Gaps = 6/138 (4%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
                 A IA S ++ Q+ R+  I+ N+ANA        S    RK +        + G 
Sbjct: 1   MSFKDIAQIAGSAMSAQTVRLNTIASNLANADAASGAEDSTYRARKPVFASIFQLDAQGE 60

Query: 62  ------RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
                 +V  +        +   PGHP+A+  G V YPNVN + E  DM   +R Y  N+
Sbjct: 61  PRGAAVQVLDVVKSTEPLRKVHQPGHPLADDEGNVLYPNVNPVEEMTDMLSASRAYSTNV 120

Query: 116 QTIKQSHDMMTTTLDLLR 133
           + + + + M    L L +
Sbjct: 121 EVLGRVNSMQLELLKLGQ 138


>gi|187926956|ref|YP_001893301.1| flagellar basal-body rod protein FlgC [Ralstonia pickettii 12J]
 gi|241665285|ref|YP_002983644.1| flagellar basal-body rod protein FlgC [Ralstonia pickettii 12D]
 gi|187728710|gb|ACD29874.1| flagellar basal-body rod protein FlgC [Ralstonia pickettii 12J]
 gi|240867312|gb|ACS64972.1| flagellar basal-body rod protein FlgC [Ralstonia pickettii 12D]
          Length = 135

 Score =  103 bits (256), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 38/135 (28%), Positives = 64/135 (47%), Gaps = 3/135 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF--EEVMHGSG 59
             L     +A S L  QS RM +++ N+ANA +     G+    ++ +    +E    + 
Sbjct: 1   MSLFKVMDVAGSALTAQSKRMNVVASNLANAESVTGPNGTAYRAKQVVFTPVQESDDYAT 60

Query: 60  GVRVKKIGVDQ-STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
           GV V ++  D  +       PG+P+A+A G V  PNV+V+ E  +M   +R Y AN++  
Sbjct: 61  GVSVDRVVEDTVTPMKRMHQPGNPLADADGYVTMPNVDVVDEMVNMISASRSYQANVEVA 120

Query: 119 KQSHDMMTTTLDLLR 133
             +  M    L L +
Sbjct: 121 NTTKTMAAKALTLGQ 135


>gi|240145509|ref|ZP_04744110.1| flagellar basal-body rod protein FlgC [Roseburia intestinalis
           L1-82]
 gi|257202324|gb|EEV00609.1| flagellar basal-body rod protein FlgC [Roseburia intestinalis
           L1-82]
 gi|291536000|emb|CBL09112.1| flagellar basal-body rod protein FlgC [Roseburia intestinalis
           M50/1]
 gi|291538494|emb|CBL11605.1| flagellar basal-body rod protein FlgC [Roseburia intestinalis
           XB6B4]
          Length = 146

 Score =  103 bits (256), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 38/146 (26%), Positives = 62/146 (42%), Gaps = 14/146 (9%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR-------------KT 48
             L  +  I+ SG+  +  RM  I++NIAN  TT    G+   R+             + 
Sbjct: 1   MGLFQAFDISASGMTAERFRMDTIAQNIANINTTRTEDGTPYRRKIVTFAEKTETPFSQY 60

Query: 49  ISFEEVMHGSGGVRVKKIGVDQ-STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                      GV+V  +  D  +     +DP HP A+ +G V YPNVN + E  ++ + 
Sbjct: 61  YETARARAVGNGVKVTSVKEDDETEMRMVYDPSHPDADENGYVTYPNVNTVTEMTNLIDA 120

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y AN      +  M+   L++ +
Sbjct: 121 TRAYEANTTAFDATKSMVQAALNISK 146


>gi|327480018|gb|AEA83328.1| flagellar basal body rod protein FlgC [Pseudomonas stutzeri DSM
           4166]
          Length = 147

 Score =  103 bits (256), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 43/147 (29%), Positives = 64/147 (43%), Gaps = 15/147 (10%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             L +  +IA SG++ QS R+  IS NIANA T   +       R  +        +G  
Sbjct: 1   MSLSSVFNIAGSGMSAQSTRLNTISSNIANAETVSSSVDQTYRARHPVFATVFQQANGQP 60

Query: 62  R---------------VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
                           V  +  DQS     ++P HP A+ +G V YPNVNV+ E ADM  
Sbjct: 61  DQSLFAGQDQAGVGVQVLGVVEDQSELQARYEPNHPAADEAGYVYYPNVNVVEEMADMIS 120

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
            +R +  N + +  +  M+   L L +
Sbjct: 121 ASRAFQTNAELMNTAKTMLQKVLTLGQ 147


>gi|295706287|ref|YP_003599362.1| flagellar basal-body rod protein FlgC [Bacillus megaterium DSM 319]
 gi|294803946|gb|ADF41012.1| flagellar basal-body rod protein FlgC [Bacillus megaterium DSM 319]
          Length = 149

 Score =  103 bits (256), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 42/149 (28%), Positives = 68/149 (45%), Gaps = 17/149 (11%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDT---PGSDPYRRKTISFEEV---- 54
             +  + +I +S L     RM ++S N+ANA TT  T       PY+RK +  +      
Sbjct: 1   MTIFQNMNITSSALTANRLRMDVVSSNMANAETTRGTYVNGEWQPYKRKMVVMQSDRSPS 60

Query: 55  ----------MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
                      + + GV+V  I  D + F   ++P HP AN  G V+ PNV+ L E  D+
Sbjct: 61  FSSVLHSEINKNQNNGVKVTDIVEDNTPFNLVYNPTHPDANDQGYVQMPNVDPLKEMTDL 120

Query: 105 RETNRLYMANLQTIKQSHDMMTTTLDLLR 133
               R Y AN+     +  ++T  L++ +
Sbjct: 121 ISATRSYEANVTVFNTNKSILTKALEIGK 149


>gi|153938711|ref|YP_001391964.1| flagellar basal body rod protein FlgC [Clostridium botulinum F str.
           Langeland]
 gi|152934607|gb|ABS40105.1| flagellar basal-body rod protein FlgC [Clostridium botulinum F str.
           Langeland]
 gi|295319981|gb|ADG00359.1| flagellar basal-body rod protein FlgC [Clostridium botulinum F str.
           230613]
          Length = 144

 Score =  103 bits (256), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 45/144 (31%), Positives = 62/144 (43%), Gaps = 11/144 (7%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR-----------KTI 49
           M     +  I+ SGL+ +  RM  I+ NI+NA TT    G    R+              
Sbjct: 1   MIKAFDTMRISASGLSAERLRMDTIASNISNATTTRTENGGPYKRKIAVFEENLNNELNK 60

Query: 50  SFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNR 109
                     GV+   I  D S   + +DP HP A+A G V  PNVNVL E ADM  + R
Sbjct: 61  KNGATEKKLYGVKATGIVEDPSPVRKMYDPSHPDADAEGYVSMPNVNVLNEMADMMASVR 120

Query: 110 LYMANLQTIKQSHDMMTTTLDLLR 133
            Y AN+  +     M    L++ +
Sbjct: 121 TYEANVTVMNAEKSMFGKALEIGK 144


>gi|114777413|ref|ZP_01452410.1| Flagellar basal-body rod protein FlgC [Mariprofundus ferrooxydans
           PV-1]
 gi|114552195|gb|EAU54697.1| Flagellar basal-body rod protein FlgC [Mariprofundus ferrooxydans
           PV-1]
          Length = 148

 Score =  103 bits (256), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 52/146 (35%), Positives = 74/146 (50%), Gaps = 14/146 (9%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
           + L++S HI+ SG++ Q  RM I++ENIANA +T  + G    RR+ I            
Sbjct: 3   NDLLSSMHISASGMSAQRTRMDIVAENIANAGSTRTSEGGPYRRRQVIFQAVSPAQPFSQ 62

Query: 62  --------------RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                         +   I  D+  F E +DP HP A+A GIVK PNVN + E  DM   
Sbjct: 63  VFNSSFQSEGQKSVKAAYIAQDKKPFREVYDPSHPDADARGIVKMPNVNPVEEMVDMNSA 122

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R + AN+ T++ S  M   +L+LLR
Sbjct: 123 ARSFEANVTTMEASKRMFLKSLELLR 148


>gi|91785636|ref|YP_560842.1| flagellar basal body rod protein FlgC [Burkholderia xenovorans
           LB400]
 gi|296157458|ref|ZP_06840293.1| flagellar basal-body rod protein FlgC [Burkholderia sp. Ch1-1]
 gi|91689590|gb|ABE32790.1| Flagellar basal-body rod protein FlgC [Burkholderia xenovorans
           LB400]
 gi|295892230|gb|EFG72013.1| flagellar basal-body rod protein FlgC [Burkholderia sp. Ch1-1]
          Length = 141

 Score =  103 bits (256), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 39/140 (27%), Positives = 68/140 (48%), Gaps = 8/140 (5%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M  L+    +A S ++ QS R+ + + N+ANA +T    G     ++ +     + G+  
Sbjct: 1   MPSLMNIFGVAGSAMSAQSQRLNVTASNLANADSTTGPDGQPYKAKQVVFAVSPLGGART 60

Query: 61  --------VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
                   V+V  +  D +     +DPG+P ANA G V  PNV+ + E  +M   +R Y 
Sbjct: 61  ASGQQVGGVQVTGVVDDPTPMKTAYDPGNPAANADGYVTLPNVDPVQEMVNMISASRSYQ 120

Query: 113 ANLQTIKQSHDMMTTTLDLL 132
           AN++T+  +  +M  TL + 
Sbjct: 121 ANVETLNTAKTLMLKTLTIG 140


>gi|119899029|ref|YP_934242.1| flagellar basal-body rod protein FlgC [Azoarcus sp. BH72]
 gi|119671442|emb|CAL95355.1| flagellar basal-body rod protein FlgC [Azoarcus sp. BH72]
          Length = 146

 Score =  103 bits (256), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 35/146 (23%), Positives = 64/146 (43%), Gaps = 14/146 (9%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG---- 57
             ++    IA S L  QS R+   + N+ANA +     G     ++ +   + +      
Sbjct: 1   MSMLNVFQIAGSALNAQSLRLNTTASNLANADSVIAEDGQPYRAKQVVFAAKPVGATPPV 60

Query: 58  ----------SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                     S GV+V ++    +     ++P +P ANA G V+ PNVNV+ E  +M   
Sbjct: 61  GGVRDKGAAASVGVQVTQVVESAAPMRLVYEPHNPAANAEGYVEMPNVNVVEEMVNMISA 120

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
           +R Y  N + +  +  ++  TL + +
Sbjct: 121 SRSYQNNAEVMNTAQTLLQRTLQIGQ 146


>gi|94312667|ref|YP_585876.1| flagellar basal body rod protein FlgC [Cupriavidus metallidurans
           CH34]
 gi|93356519|gb|ABF10607.1| flagellar basal body rod protein FlgC [Cupriavidus metallidurans
           CH34]
          Length = 135

 Score =  103 bits (256), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 40/132 (30%), Positives = 67/132 (50%), Gaps = 3/132 (2%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS---GGV 61
           ++   +A S +A QS RM + + N+ANA +     G     ++ I       G    GGV
Sbjct: 4   MSIFDVAGSAMAAQSQRMNVTASNLANADSAVAPNGQPYRAKQVIFEMAPTPGQSDVGGV 63

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
           +V  +  D +      +P HP+A+A+G V  PNVN + E  +M   +R Y AN++ +  +
Sbjct: 64  QVAGVMEDTAPARMVHNPSHPLADANGYVTMPNVNPVEEMVNMISASRSYQANVEVLNTA 123

Query: 122 HDMMTTTLDLLR 133
            +MM  TL + +
Sbjct: 124 KNMMLKTLTIGQ 135


>gi|149188064|ref|ZP_01866359.1| flagellar basal-body rod protein C [Vibrio shilonii AK1]
 gi|148838052|gb|EDL54994.1| flagellar basal-body rod protein C [Vibrio shilonii AK1]
          Length = 138

 Score =  103 bits (256), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 38/138 (27%), Positives = 62/138 (44%), Gaps = 6/138 (4%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM------ 55
             L    ++  S ++ +S R+   S N+ANA +   +       R  +   E+       
Sbjct: 1   MSLFNVFNVTGSAMSAESVRLNTTSSNLANADSISSSAKETYKARHAVFGAELSKAQYNR 60

Query: 56  HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
             S  V+V  I         E++P HP+AN  G +  PNVNV+ E A+M   +R Y  N+
Sbjct: 61  DHSVPVKVLGIVESDKPLSAEYNPDHPLANDEGYIYKPNVNVMEEMANMISASRSYQTNV 120

Query: 116 QTIKQSHDMMTTTLDLLR 133
           Q    S  M+ +TL + +
Sbjct: 121 QVADASKQMLLSTLRMGQ 138


>gi|288553067|ref|YP_003425002.1| flagellar basal body rod protein FlgC [Bacillus pseudofirmus OF4]
 gi|288544227|gb|ADC48110.1| flagellar basal body rod protein FlgC [Bacillus pseudofirmus OF4]
          Length = 151

 Score =  103 bits (256), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 47/151 (31%), Positives = 67/151 (44%), Gaps = 19/151 (12%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGD---TPGSDPYRRKTISFEEVMHGS 58
             L +  + + S L  Q  RM +IS N+ANA TT          PYRRK +  E      
Sbjct: 1   MTLFSGFNASASALTTQRLRMDVISSNMANAETTRARMVDGEWTPYRRKMVVVEPNQKQP 60

Query: 59  ----------------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETA 102
                            GV+   I  DQ+ F   +DP HP AN  G V+ PNV+ L E  
Sbjct: 61  FSAFLGNAMKQNSEAGTGVKASAIVEDQNPFKLLYDPTHPDANEDGYVEMPNVDPLREMV 120

Query: 103 DMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           D+    R Y AN+ ++  + +M+   L++ R
Sbjct: 121 DLMTATRSYEANVTSLNATKNMLMKALEIGR 151


>gi|323527715|ref|YP_004229868.1| flagellar basal-body rod protein FlgC [Burkholderia sp. CCGE1001]
 gi|323384717|gb|ADX56808.1| flagellar basal-body rod protein FlgC [Burkholderia sp. CCGE1001]
          Length = 141

 Score =  103 bits (256), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 39/140 (27%), Positives = 68/140 (48%), Gaps = 8/140 (5%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M  L+    +A S ++ QS R+ + + N+ANA +T    G     ++ +     + G+  
Sbjct: 1   MPSLMNIFGVAGSAMSAQSQRLNVTASNLANADSTTGPDGQPYRAKQVVFAVAPLGGART 60

Query: 61  --------VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
                   V+V  +  D +     +DPG+P ANA G V  PNV+ + E  +M   +R Y 
Sbjct: 61  ASGQQVGGVQVTGVVDDPTPMKTAYDPGNPAANADGYVTLPNVDPVQEMVNMISASRSYQ 120

Query: 113 ANLQTIKQSHDMMTTTLDLL 132
           AN++T+  +  +M  TL + 
Sbjct: 121 ANVETLNTAKTLMLKTLTIG 140


>gi|88858145|ref|ZP_01132787.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
           [Pseudoalteromonas tunicata D2]
 gi|88819762|gb|EAR29575.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
           [Pseudoalteromonas tunicata D2]
          Length = 140

 Score =  103 bits (255), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 36/139 (25%), Positives = 63/139 (45%), Gaps = 7/139 (5%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-- 59
             L     I+ +G++ QS R+   + N++NA +   +       R  +   E+   +   
Sbjct: 1   MSLFNVFDISATGMSAQSVRLNTTASNMSNANSVSSSIDQTYRARHPVFAAELTKAAASQ 60

Query: 60  -----GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
                GV+V  I         EF+P HP+A+  G +   NVNV+ E A+M   +R Y  N
Sbjct: 61  QGESVGVKVLGIVESDKPLQIEFNPTHPMADKDGFIYKSNVNVVEEMANMISASRAYQTN 120

Query: 115 LQTIKQSHDMMTTTLDLLR 133
           +Q    +  M++ T+ L +
Sbjct: 121 VQLADAAKSMLSKTIMLGQ 139


>gi|78224306|ref|YP_386053.1| flagellar basal-body rod protein FlgC [Geobacter metallireducens
           GS-15]
 gi|78195561|gb|ABB33328.1| Flagellar basal-body rod protein FlgC [Geobacter metallireducens
           GS-15]
          Length = 147

 Score =  103 bits (255), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 46/145 (31%), Positives = 68/145 (46%), Gaps = 14/145 (9%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR--------------K 47
               ++  I++S L+ +  RM +IS NIANA +T    G    R+               
Sbjct: 1   MDFFSAMQISSSALSAERTRMNLISSNIANANSTRTAEGGPYKRKDAVFAATPAAEKFQA 60

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
            +          GV+V ++  DQ+    ++DP HP ANA G V  PNVNV+ E ADM   
Sbjct: 61  AMERMRRGTSPAGVQVTQVIEDQNPPRLQYDPTHPDANAQGYVALPNVNVVEEMADMIAA 120

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLL 132
            R Y AN+  ++ +  M   TL+L 
Sbjct: 121 TRAYEANVTAVQAAKGMALKTLELG 145


>gi|168183267|ref|ZP_02617931.1| flagellar basal-body rod protein FlgC [Clostridium botulinum Bf]
 gi|170756841|ref|YP_001782281.1| flagellar basal body rod protein FlgC [Clostridium botulinum B1
           str. Okra]
 gi|226950077|ref|YP_002805168.1| flagellar basal body rod protein FlgC [Clostridium botulinum A2
           str. Kyoto]
 gi|237796104|ref|YP_002863656.1| flagellar basal body rod protein FlgC [Clostridium botulinum Ba4
           str. 657]
 gi|169122053|gb|ACA45889.1| flagellar basal-body rod protein FlgC [Clostridium botulinum B1
           str. Okra]
 gi|182673715|gb|EDT85676.1| flagellar basal-body rod protein FlgC [Clostridium botulinum Bf]
 gi|226841648|gb|ACO84314.1| flagellar basal-body rod protein FlgC [Clostridium botulinum A2
           str. Kyoto]
 gi|229263476|gb|ACQ54509.1| flagellar basal-body rod protein FlgC [Clostridium botulinum Ba4
           str. 657]
          Length = 144

 Score =  103 bits (255), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 44/144 (30%), Positives = 61/144 (42%), Gaps = 11/144 (7%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR-----------KTI 49
           M     +  I+ SGL+ +  RM  I+ NI+NA TT    G    R+              
Sbjct: 1   MIKAFDTMRISASGLSAERLRMDTIASNISNATTTRTENGGPYKRKIAVFEENLNNELNK 60

Query: 50  SFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNR 109
                     GV+   I  D S   + +DP HP A+  G V  PNVNVL E ADM  + R
Sbjct: 61  KNGATEKKLYGVKATGIVEDSSPVRKMYDPSHPDADEEGYVSMPNVNVLNEMADMMASVR 120

Query: 110 LYMANLQTIKQSHDMMTTTLDLLR 133
            Y AN+  +     M    L++ +
Sbjct: 121 TYEANVTVMNAEKSMFGKALEIGK 144


>gi|260772272|ref|ZP_05881188.1| flagellar basal-body rod protein FlgC [Vibrio metschnikovii CIP
           69.14]
 gi|260611411|gb|EEX36614.1| flagellar basal-body rod protein FlgC [Vibrio metschnikovii CIP
           69.14]
          Length = 138

 Score =  103 bits (255), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 37/138 (26%), Positives = 61/138 (44%), Gaps = 6/138 (4%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM------ 55
             L    ++  S ++ +S R+   S N+ANA +   +       R  +   E+       
Sbjct: 1   MSLFNVFNVTGSAMSAESVRLNTTSSNLANADSVSSSAKETYKARHAVFGAELNKARYHR 60

Query: 56  HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
             +  V+V  I         E++P HP+AN  G +  PNVNV+ E A+M   +R Y  N+
Sbjct: 61  DPNVPVKVLGIVESNKPLNAEYNPDHPLANDEGFIYKPNVNVMEEMANMISASRSYQTNV 120

Query: 116 QTIKQSHDMMTTTLDLLR 133
           Q    S  M+  TL + +
Sbjct: 121 QVADASKQMLLRTLQMGQ 138


>gi|302387782|ref|YP_003823604.1| flagellar basal-body rod protein FlgC [Clostridium saccharolyticum
           WM1]
 gi|302198410|gb|ADL05981.1| flagellar basal-body rod protein FlgC [Clostridium saccharolyticum
           WM1]
          Length = 148

 Score =  103 bits (255), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 42/148 (28%), Positives = 65/148 (43%), Gaps = 16/148 (10%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE-------- 53
              ++S +I+ S +  Q  R+ I SENIAN  TT    G    R+  +            
Sbjct: 1   MSFLSSMNISASAMTAQRLRLDIASENIANIDTTRTEAGGPYRRKMVVLEARSENNFRRT 60

Query: 54  --------VMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
                       +GG+RV +I  D S F   + P HP A+ +G V+ PNV+++ ET D  
Sbjct: 61  LMNAAGLGRQQSTGGIRVSQIVEDASPFKSVYSPEHPDADENGYVQMPNVDLIKETVDSM 120

Query: 106 ETNRLYMANLQTIKQSHDMMTTTLDLLR 133
              R Y AN+        M +  L++ +
Sbjct: 121 SATRSYEANITAFNAIKFMASKALEIGK 148


>gi|315648139|ref|ZP_07901240.1| flagellar basal-body rod protein FlgC [Paenibacillus vortex V453]
 gi|315276785|gb|EFU40128.1| flagellar basal-body rod protein FlgC [Paenibacillus vortex V453]
          Length = 149

 Score =  103 bits (255), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 50/149 (33%), Positives = 67/149 (44%), Gaps = 17/149 (11%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTG---DTPGSDPYRRKTISFEEVM--- 55
             +  S  I  S L  Q  RM +IS NIANA TT    +   + PYRRKT+ F+      
Sbjct: 1   MNISNSFGINASALTAQRLRMDVISSNIANAETTRARIENGQAVPYRRKTVVFQPQQESF 60

Query: 56  -----------HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
                          GV+V  +  DQ+     ++P HP AN  G V  PNV++  E  DM
Sbjct: 61  EGLLRAQMSGQDAGQGVKVAAVQEDQAPLKRVYNPTHPDANTEGYVFMPNVDITKEMVDM 120

Query: 105 RETNRLYMANLQTIKQSHDMMTTTLDLLR 133
               R Y AN+  I  S  M+   L++ R
Sbjct: 121 LAATRSYEANVTAINASKAMIMKALEIGR 149


>gi|261856362|ref|YP_003263645.1| flagellar basal-body rod protein FlgC [Halothiobacillus
           neapolitanus c2]
 gi|261836831|gb|ACX96598.1| flagellar basal-body rod protein FlgC [Halothiobacillus
           neapolitanus c2]
          Length = 133

 Score =  103 bits (255), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 1/133 (0%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-G 60
             L +  ++++S ++ QS R+   + N+ANA      P      R+ +  + +    G G
Sbjct: 1   MSLFSIFNVSSSAMSAQSLRLNATASNMANADAVATKPEDAYKAREPVFQQVMEQNGGVG 60

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           VRV  I    +     ++PG+P+AN  G V   NVN + E  +M   +R Y  N+Q +  
Sbjct: 61  VRVSGITQSTAPNPALYEPGNPLANKDGYVYSSNVNPVEEMVNMLSASRSYQTNVQMMDT 120

Query: 121 SHDMMTTTLDLLR 133
           + ++   TL L +
Sbjct: 121 AKNLALRTLQLGQ 133


>gi|28869138|ref|NP_791757.1| flagellar basal-body rod protein FlgC [Pseudomonas syringae pv.
           tomato str. DC3000]
 gi|66046709|ref|YP_236550.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           syringae B728a]
 gi|71737330|ref|YP_275565.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|213967584|ref|ZP_03395732.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           tomato T1]
 gi|237799204|ref|ZP_04587665.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           oryzae str. 1_6]
 gi|237806223|ref|ZP_04592927.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           oryzae str. 1_6]
 gi|257484951|ref|ZP_05638992.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           tabaci ATCC 11528]
 gi|289627761|ref|ZP_06460715.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           aesculi str. NCPPB3681]
 gi|289651649|ref|ZP_06482992.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           aesculi str. 2250]
 gi|298487859|ref|ZP_07005899.1| Flagellar basal-body rod protein flgC [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|301385711|ref|ZP_07234129.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           tomato Max13]
 gi|302060077|ref|ZP_07251618.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           tomato K40]
 gi|302134836|ref|ZP_07260826.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           tomato NCPPB 1108]
 gi|302185585|ref|ZP_07262258.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           syringae 642]
 gi|28852378|gb|AAO55452.1| flagellar basal-body rod protein FlgC [Pseudomonas syringae pv.
           tomato str. DC3000]
 gi|63257416|gb|AAY38512.1| Flagellar basal-body rod protein FlgC [Pseudomonas syringae pv.
           syringae B728a]
 gi|71557883|gb|AAZ37094.1| flagellar basal-body rod protein FlgC [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|213927885|gb|EEB61432.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           tomato T1]
 gi|298157584|gb|EFH98664.1| Flagellar basal-body rod protein flgC [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|320325091|gb|EFW81160.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           glycinea str. B076]
 gi|320329350|gb|EFW85343.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           glycinea str. race 4]
 gi|330866420|gb|EGH01129.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           aesculi str. 0893_23]
 gi|330875981|gb|EGH10130.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
 gi|330880520|gb|EGH14669.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           glycinea str. race 4]
 gi|330889087|gb|EGH21748.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           mori str. 301020]
 gi|330899399|gb|EGH30818.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           japonica str. M301072PT]
 gi|330943205|gb|EGH45612.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           pisi str. 1704B]
 gi|330953719|gb|EGH53979.1| flagellar basal body rod protein FlgC [Pseudomonas syringae Cit 7]
 gi|330961194|gb|EGH61454.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           maculicola str. ES4326]
 gi|330967088|gb|EGH67348.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           actinidiae str. M302091]
 gi|330972411|gb|EGH72477.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           aceris str. M302273PT]
 gi|330975974|gb|EGH76040.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           aptata str. DSM 50252]
 gi|330986466|gb|EGH84569.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           lachrymans str. M301315]
 gi|331011040|gb|EGH91096.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           tabaci ATCC 11528]
 gi|331017028|gb|EGH97084.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           lachrymans str. M302278PT]
 gi|331022059|gb|EGI02116.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           oryzae str. 1_6]
 gi|331027336|gb|EGI07391.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           oryzae str. 1_6]
          Length = 146

 Score =  103 bits (255), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 42/146 (28%), Positives = 63/146 (43%), Gaps = 14/146 (9%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS----------- 50
             L    +IA S ++ Q+ R+   + NIANA T   +       R  +            
Sbjct: 1   MSLANVFNIAGSAMSAQTTRLNTTASNIANAETVSSSMDQTYRARHPVFATVMQGQQSTG 60

Query: 51  ---FEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
              F++      GV+V  I  D S     ++P HP A+  G V YPNVNV+ E ADM   
Sbjct: 61  GSLFQDQGEAGQGVQVNGIIEDSSNLEARYEPNHPSADKDGYVYYPNVNVVEEMADMISA 120

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
           +R +  N + +  +  MM   L L +
Sbjct: 121 SRSFQTNAEIMNTAKSMMQKVLTLGQ 146


>gi|315127355|ref|YP_004069358.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
           [Pseudoalteromonas sp. SM9913]
 gi|315015869|gb|ADT69207.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
           [Pseudoalteromonas sp. SM9913]
          Length = 143

 Score =  103 bits (255), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 40/142 (28%), Positives = 65/142 (45%), Gaps = 10/142 (7%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-- 59
             L     IA SG++ Q+ R+   + NI+NA T   +       R+ +   E+   S   
Sbjct: 1   MSLYNVFDIAGSGMSAQNVRLNTTASNISNANTISSSQNETYRARQPVFAAELTKASASA 60

Query: 60  --------GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
                   GV+V  +         E++P HP A+ +G +  PNVNV+ E A+M   +R Y
Sbjct: 61  SNPQGSAVGVKVLGVVESNKPLQIEYNPNHPSADENGYIYKPNVNVVEEMANMISASRSY 120

Query: 112 MANLQTIKQSHDMMTTTLDLLR 133
             N+Q    +  M++ TL L +
Sbjct: 121 QTNVQVADAAKQMLSKTLLLGQ 142


>gi|114570487|ref|YP_757167.1| flagellar basal body rod protein FlgC [Maricaulis maris MCS10]
 gi|114340949|gb|ABI66229.1| flagellar basal-body rod protein FlgC [Maricaulis maris MCS10]
          Length = 137

 Score =  103 bits (255), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 65/136 (47%), Positives = 80/136 (58%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M     +  I+  G+  Q+ARM+IISENIANA +T    G DPYRR+   FE  +  + G
Sbjct: 1   MGNASDTMQISAFGMRAQAARMRIISENIANADSTAREAGGDPYRRQVPVFEAELDRATG 60

Query: 61  ---VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
              VR+  +  DQS F  E+DPGHP ANA G V+Y NV  LVE  DMRE  R Y ANL  
Sbjct: 61  LNAVRMTDVAHDQSEFTLEYDPGHPAANAEGYVQYSNVQTLVEMMDMREAMRSYEANLNM 120

Query: 118 IKQSHDMMTTTLDLLR 133
           I+ +  M    LDLLR
Sbjct: 121 IENARRMQERALDLLR 136


>gi|162147439|ref|YP_001601900.1| flagellar basal body rod protein FlgC [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|161786016|emb|CAP55598.1| putative flagellar basal-body rod protein flgC [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 135

 Score =  103 bits (255), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 56/135 (41%), Positives = 84/135 (62%), Gaps = 3/135 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
                +  ++ +G+  Q  R+++ +EN+AN  TTG T G+DPYRRKTI+F+  +  + GV
Sbjct: 1   MDFSDTIGVSAAGMRAQEERLRVAAENLANKDTTGSTRGADPYRRKTITFQATLDQASGV 60

Query: 62  ---RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
              +VK IG D + F  ++DP HP A+A+G VK PNVN +VE  D  E    Y ANL T+
Sbjct: 61  SSVKVKGIGQDNTPFQTKYDPSHPAADANGYVKMPNVNSMVEIMDTHEAQHSYEANLNTM 120

Query: 119 KQSHDMMTTTLDLLR 133
           + S  M T T++L++
Sbjct: 121 QISRSMATRTINLIK 135


>gi|187778746|ref|ZP_02995219.1| hypothetical protein CLOSPO_02341 [Clostridium sporogenes ATCC
           15579]
 gi|187772371|gb|EDU36173.1| hypothetical protein CLOSPO_02341 [Clostridium sporogenes ATCC
           15579]
          Length = 153

 Score =  102 bits (254), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 46/144 (31%), Positives = 66/144 (45%), Gaps = 11/144 (7%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG- 59
           M     +  I+ SGL+ +  RM  I+ NIANA TT    G    R+  +  E + +    
Sbjct: 10  MIKAFDTMRISASGLSAERLRMDTIASNIANATTTRTENGGPYKRKIAVFEENLNNELNK 69

Query: 60  ----------GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNR 109
                     GV+   I  D S   + +DP HP A+A G V  PNVNVL E ADM  + R
Sbjct: 70  KNGTNEKKLYGVKATGIVEDSSPVRKMYDPSHPDADAEGYVSMPNVNVLNEMADMMASVR 129

Query: 110 LYMANLQTIKQSHDMMTTTLDLLR 133
            Y A++  +     M    L++ +
Sbjct: 130 TYEASVTVMNAEKSMFGKALEIGK 153


>gi|304404242|ref|ZP_07385904.1| flagellar basal-body rod protein FlgC [Paenibacillus
           curdlanolyticus YK9]
 gi|304347220|gb|EFM13052.1| flagellar basal-body rod protein FlgC [Paenibacillus
           curdlanolyticus YK9]
          Length = 149

 Score =  102 bits (254), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 45/149 (30%), Positives = 62/149 (41%), Gaps = 17/149 (11%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGD---TPGSDPYRRKTISFEEVMHG- 57
             L        S L  Q  RM +IS NIANA TT          PY RK +  E      
Sbjct: 1   MRLSNGFDANASALTAQRLRMDVISSNIANAETTRAGYVNGKFVPYTRKMVVMEPANKSF 60

Query: 58  -------------SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
                        + GV+V KI  D++     ++P HP A+  G V  PNV++  E  DM
Sbjct: 61  SDVLSGQMNGTAANPGVKVTKIVEDKTPPKLVYNPSHPDADEFGYVSMPNVDIAKEMIDM 120

Query: 105 RETNRLYMANLQTIKQSHDMMTTTLDLLR 133
              +R Y AN+  +  +  M    L++ R
Sbjct: 121 ISASRSYEANITALNATKGMFAKALEIGR 149


>gi|260574405|ref|ZP_05842409.1| flagellar basal-body rod protein FlgC [Rhodobacter sp. SW2]
 gi|259023301|gb|EEW26593.1| flagellar basal-body rod protein FlgC [Rhodobacter sp. SW2]
          Length = 126

 Score =  102 bits (254), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 54/133 (40%), Positives = 79/133 (59%), Gaps = 8/133 (6%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M  L+ S  +A SG+  Q+ R++ +SENIANA T G       Y RKT+SF+E M   G 
Sbjct: 1   MADLLQSLTMAASGMEAQAMRLRHVSENIANADTPG-------YHRKTMSFQEAMD-GGT 52

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V    + +D+S  V+ +DPGHP+A+ +G     NV++++E AD RE  R Y ANL+   Q
Sbjct: 53  VEAGPVRLDRSELVKIYDPGHPLADETGHYDGSNVDLVIEIADAREAQRSYEANLKMFDQ 112

Query: 121 SHDMMTTTLDLLR 133
           +  M  +  +LLR
Sbjct: 113 ARQMTQSLFELLR 125


>gi|254466614|ref|ZP_05080025.1| flagellar basal-body rod protein FlgC [Rhodobacterales bacterium
           Y4I]
 gi|206687522|gb|EDZ48004.1| flagellar basal-body rod protein FlgC [Rhodobacterales bacterium
           Y4I]
          Length = 130

 Score =  102 bits (254), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 45/133 (33%), Positives = 74/133 (55%), Gaps = 4/133 (3%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M     +  +  SGL  Q+AR++ +SENI+NA T G    + P+        +V H   G
Sbjct: 1   MSEFSKALSVTASGLKAQAARLRHVSENISNADTPGYRRKAVPFESVRELRTDVEHVRTG 60

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
               ++ +D+S   + +DP HP+A+ SG  +  NV++++E AD RE  R Y ANL+  +Q
Sbjct: 61  ----RVTLDRSELEKVYDPSHPLADESGHFEGSNVDLMIEIADAREAQRSYEANLKMFEQ 116

Query: 121 SHDMMTTTLDLLR 133
           +  M  + ++LLR
Sbjct: 117 TRSMSASLMELLR 129


>gi|156973584|ref|YP_001444491.1| flagellar basal body rod protein FlgC [Vibrio harveyi ATCC
           BAA-1116]
 gi|156525178|gb|ABU70264.1| hypothetical protein VIBHAR_01287 [Vibrio harveyi ATCC BAA-1116]
          Length = 137

 Score =  102 bits (254), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 39/137 (28%), Positives = 62/137 (45%), Gaps = 5/137 (3%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG- 60
             L    ++  S ++ +S R+   S N+ANA +   +       R  +   E+ +   G 
Sbjct: 1   MSLFNVFNVTGSAMSAESVRLNTTSSNLANADSVSSSAKDTYKARHAVFGAELSNAMRGG 60

Query: 61  ----VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
               V+V  I         E++P HP+AN  G +  PNVNV+ E A+M   +R Y  NLQ
Sbjct: 61  DTVPVKVMGIVESDKPLNAEYNPDHPLANDEGYIYKPNVNVMEEMANMISASRAYQTNLQ 120

Query: 117 TIKQSHDMMTTTLDLLR 133
               S  M+  TL + +
Sbjct: 121 VADSSKQMLLRTLQMGQ 137


>gi|303248348|ref|ZP_07334609.1| flagellar basal-body rod protein FlgC [Desulfovibrio fructosovorans
           JJ]
 gi|302490256|gb|EFL50170.1| flagellar basal-body rod protein FlgC [Desulfovibrio fructosovorans
           JJ]
          Length = 146

 Score =  102 bits (254), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 47/146 (32%), Positives = 66/146 (45%), Gaps = 14/146 (9%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRK-------------- 47
             L  +  I +SG++ Q   M  IS N+AN RTT    G  PY RK              
Sbjct: 1   MDLFTAMDIGSSGMSAQRTLMNTISMNLANIRTTRTVNGGGPYVRKSVMLESTPIDSPFS 60

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                       GV+V  +  D   F  +++PGHP ANA G V YP++NV+ E A+M   
Sbjct: 61  EAMKTAQDRELAGVKVTGLVNDNRPFRMQYEPGHPDANAEGYVAYPDINVVEEMANMITA 120

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y A+  +I     M +  L++ R
Sbjct: 121 MRSYEASSSSIGTVKTMFSKALEIGR 146


>gi|83716764|ref|YP_438387.1| flagellar basal-body rod protein FlgC [Burkholderia thailandensis
           E264]
 gi|257141420|ref|ZP_05589682.1| flagellar basal-body rod protein FlgC [Burkholderia thailandensis
           E264]
 gi|83650589|gb|ABC34653.1| flagellar basal-body rod protein FlgC [Burkholderia thailandensis
           E264]
          Length = 138

 Score =  102 bits (254), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 38/138 (27%), Positives = 59/138 (42%), Gaps = 6/138 (4%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
                 A IA S ++ Q+ R+  I+ N+ANA        S    RK +        + G 
Sbjct: 1   MSFKDIAQIAGSAMSAQTVRLNTIASNLANADAASGAEDSTYRARKPVFASIFQLDAQGE 60

Query: 62  ------RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
                 +V  +        +   PGHP+A+A G V YPNVN + E  DM   +R Y  N+
Sbjct: 61  PRGAAVQVLDVVKSTEPLRKVHQPGHPLADAEGNVLYPNVNPVEEMTDMLSASRAYSTNV 120

Query: 116 QTIKQSHDMMTTTLDLLR 133
           + + + + M    L L +
Sbjct: 121 EVLGRVNSMQLELLKLGQ 138


>gi|153834459|ref|ZP_01987126.1| flagellar basal-body rod protein FlgC [Vibrio harveyi HY01]
 gi|163802605|ref|ZP_02196497.1| flagellar basal-body rod protein C [Vibrio sp. AND4]
 gi|148869155|gb|EDL68187.1| flagellar basal-body rod protein FlgC [Vibrio harveyi HY01]
 gi|159173688|gb|EDP58507.1| flagellar basal-body rod protein C [Vibrio sp. AND4]
          Length = 137

 Score =  102 bits (254), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 38/137 (27%), Positives = 62/137 (45%), Gaps = 5/137 (3%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG- 60
             L    ++  S ++ +S R+   S N+ANA +   +       R  +   E+ +   G 
Sbjct: 1   MSLFNVFNVTGSAMSAESVRLNTTSSNLANADSVSSSAKDTYKARHAVFGAELSNAMRGG 60

Query: 61  ----VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
               V+V  I         E++P HP+AN  G +  PNVNV+ E A+M   +R Y  N+Q
Sbjct: 61  DTVPVKVMGIVESDKPLNAEYNPDHPLANDEGYIYKPNVNVMEEMANMISASRAYQTNVQ 120

Query: 117 TIKQSHDMMTTTLDLLR 133
               S  M+  TL + +
Sbjct: 121 VADSSKQMLLRTLQMGQ 137


>gi|229826300|ref|ZP_04452369.1| hypothetical protein GCWU000182_01672 [Abiotrophia defectiva ATCC
           49176]
 gi|229789170|gb|EEP25284.1| hypothetical protein GCWU000182_01672 [Abiotrophia defectiva ATCC
           49176]
          Length = 147

 Score =  102 bits (254), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 42/144 (29%), Positives = 63/144 (43%), Gaps = 13/144 (9%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF---------- 51
             +  +  I+ +G+  Q  R  +I++NIAN  TT D  G+   R+  +            
Sbjct: 1   MSIFGAMDISATGMTAQQLRTDVIAQNIANINTTRDQNGNVYRRKNVVFTEKDVTGFSQI 60

Query: 52  --EEVMHGSGGVRVKKIGVDQ-STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                     GV+V  I  D  S     +DP HP AN  G V YPNVN + E  DM +  
Sbjct: 61  LLRTAGRVGNGVKVTSIYSDTKSPVRLVYDPSHPDANEDGYVTYPNVNTVQEMTDMIDAT 120

Query: 109 RLYMANLQTIKQSHDMMTTTLDLL 132
           R Y AN+     + +M+   L++ 
Sbjct: 121 RSYEANVTAFNATKNMILKALEMG 144


>gi|262394941|ref|YP_003286795.1| flagellar basal-body rod protein FlgC [Vibrio sp. Ex25]
 gi|262338535|gb|ACY52330.1| flagellar basal-body rod protein FlgC [Vibrio sp. Ex25]
          Length = 137

 Score =  102 bits (254), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 38/137 (27%), Positives = 62/137 (45%), Gaps = 5/137 (3%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG- 60
             L    ++  S ++ +S R+   S N+ANA +   +       R  +   E+ +   G 
Sbjct: 1   MSLFNVFNVTGSAMSAESVRLNTTSSNLANADSVSSSAKDTYKARHAVFGAELSNAMRGG 60

Query: 61  ----VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
               V+V  I         E++P HP+AN  G +  PNVNV+ E A+M   +R Y  N+Q
Sbjct: 61  DTVPVKVMGIVESDKPLSAEYNPDHPLANEEGYIYKPNVNVMEEMANMISASRAYQTNVQ 120

Query: 117 TIKQSHDMMTTTLDLLR 133
               S  M+  TL + +
Sbjct: 121 VADSSKQMLLRTLQMGQ 137


>gi|84388089|ref|ZP_00990985.1| flagellar basal body rod protein [Vibrio splendidus 12B01]
 gi|84377156|gb|EAP94026.1| flagellar basal body rod protein [Vibrio splendidus 12B01]
          Length = 137

 Score =  102 bits (254), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 36/137 (26%), Positives = 58/137 (42%), Gaps = 5/137 (3%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             L    ++  S ++ +S R+   S N+ANA +   +       R  +   E+       
Sbjct: 1   MSLFNVFNVTGSAMSAESVRLNTTSSNLANADSVSSSAEETYKARHAVFGAELNKARNSG 60

Query: 62  R-----VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
                 V  I         E++P HP+AN  G +  PNVNV+ E A+M   +R Y  N+Q
Sbjct: 61  HTVPVKVLGIVESDKPLSAEYNPDHPLANNEGYIYKPNVNVMEEMANMISASRAYQTNVQ 120

Query: 117 TIKQSHDMMTTTLDLLR 133
               S  M+  TL + +
Sbjct: 121 VADSSKQMLLRTLQMGQ 137


>gi|283853239|ref|ZP_06370490.1| flagellar basal-body rod protein FlgC [Desulfovibrio sp. FW1012B]
 gi|283571344|gb|EFC19353.1| flagellar basal-body rod protein FlgC [Desulfovibrio sp. FW1012B]
          Length = 146

 Score =  102 bits (254), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 48/146 (32%), Positives = 68/146 (46%), Gaps = 14/146 (9%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRK-------------- 47
             L  +  I +SG++ Q   M  IS N+AN +TT    G+ PY RK              
Sbjct: 1   MDLFTALDIGSSGMSAQRTLMNTISMNLANIKTTRTVNGAGPYVRKSVMLESTPVDAPFS 60

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                       GV+V  +  D   F  +++PGHP ANA G V YP++NV+ E A+M   
Sbjct: 61  KAMQSAQDRDLAGVKVTGLVNDNRPFRMQYEPGHPDANADGYVAYPDINVVEEMANMITA 120

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y A+  +I    +M T  LD+ R
Sbjct: 121 MRSYEASSSSIGTVKNMFTKALDIGR 146


>gi|91225871|ref|ZP_01260840.1| flagellar basal-body rod protein C [Vibrio alginolyticus 12G01]
 gi|91189521|gb|EAS75797.1| flagellar basal-body rod protein C [Vibrio alginolyticus 12G01]
          Length = 137

 Score =  102 bits (254), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 38/137 (27%), Positives = 62/137 (45%), Gaps = 5/137 (3%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG- 60
             L    ++  S ++ +S R+   S N+ANA +   +       R  +   E+ +   G 
Sbjct: 1   MSLFNVFNVTGSAMSAESVRLNTTSSNLANADSVSSSAKDTYKARHAVFGAELSNAMRGG 60

Query: 61  ----VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
               V+V  I         E++P HP+AN  G +  PNVNV+ E A+M   +R Y  N+Q
Sbjct: 61  DTVPVKVMGIVESDKPLNAEYNPDHPLANEEGYIYKPNVNVMEEMANMISASRAYQTNVQ 120

Query: 117 TIKQSHDMMTTTLDLLR 133
               S  M+  TL + +
Sbjct: 121 VADSSKQMLLRTLQMGQ 137


>gi|298530645|ref|ZP_07018047.1| flagellar basal-body rod protein FlgC [Desulfonatronospira
           thiodismutans ASO3-1]
 gi|298510019|gb|EFI33923.1| flagellar basal-body rod protein FlgC [Desulfonatronospira
           thiodismutans ASO3-1]
          Length = 146

 Score =  102 bits (253), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 40/145 (27%), Positives = 64/145 (44%), Gaps = 13/145 (8%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
              + S  I  S L+ +   + +IS N+ANA TT    G    R+  +     +    G 
Sbjct: 1   MSFMKSLDIGASALSAERTHLNVISMNLANANTTRTPEGGPYERKSVLFRSTPLETPFGH 60

Query: 62  -------------RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                        + +K+  DQ  F   +DP HP A+  G VK P++NV+ E A+M    
Sbjct: 61  AMQTELERELRGVKAQKVMTDQRPFKMVYDPAHPDADQEGYVKTPDINVVEEMANMLTAM 120

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R Y AN+  +  + +M    L++ R
Sbjct: 121 RTYEANVSAVTNTKNMFNKALEIGR 145


>gi|323703167|ref|ZP_08114820.1| flagellar basal-body rod protein FlgC [Desulfotomaculum nigrificans
           DSM 574]
 gi|323531826|gb|EGB21712.1| flagellar basal-body rod protein FlgC [Desulfotomaculum nigrificans
           DSM 574]
          Length = 145

 Score =  102 bits (253), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 44/144 (30%), Positives = 69/144 (47%), Gaps = 12/144 (8%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTG--DTPGSDPYRRKTISFEEVMHG-- 57
             L  S  I+ SG+  +  R+ +I+ N+AN  T G  + P +  YRR+   F E +    
Sbjct: 1   MGLFDSFAISASGMTSERLRLDLIANNVANMNTAGRPNDPNNPVYRRRVPVFAEQLRQTM 60

Query: 58  --------SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNR 109
                     GVRVK I  D +      +P +P+A+  G V YPN+N++ E  DM   +R
Sbjct: 61  AANSTEPRGAGVRVKAIVEDPAPPRIVHEPDNPLADQDGNVAYPNINIVNEMVDMITASR 120

Query: 110 LYMANLQTIKQSHDMMTTTLDLLR 133
            Y AN+  +  +  M    L++ R
Sbjct: 121 AYEANVTALNAAKSMALKALEISR 144


>gi|315636296|ref|ZP_07891546.1| flagellar basal-body rod protein FlgC [Arcobacter butzleri JV22]
 gi|315479385|gb|EFU70068.1| flagellar basal-body rod protein FlgC [Arcobacter butzleri JV22]
          Length = 154

 Score =  102 bits (253), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 40/154 (25%), Positives = 72/154 (46%), Gaps = 21/154 (13%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-- 59
                  ++A SG++ Q  R+ ++S NIANA+TT    G    +++ +  + ++  +   
Sbjct: 1   MGFFDGYNVATSGMSAQRTRINVVSANIANAKTTHTAEGGPYKKQEVVFEDVLVANTNKR 60

Query: 60  -------------------GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVE 100
                              GV V+KI    +  V ++DP HP AN  G V YP++N ++E
Sbjct: 61  TNTNDVETTNSPLSESSLRGVGVRKIIQSDAKPVLKYDPTHPDANEKGYVAYPDINPVIE 120

Query: 101 TADMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
             ++ E  R Y AN+ +      + + TL++L  
Sbjct: 121 MVNLIEAMRSYEANVTSFNTHRGIDSKTLEILNS 154


>gi|86146157|ref|ZP_01064483.1| flagellar basal body rod protein [Vibrio sp. MED222]
 gi|218708802|ref|YP_002416423.1| flagellar basal body rod protein FlgC [Vibrio splendidus LGP32]
 gi|85836104|gb|EAQ54236.1| flagellar basal body rod protein [Vibrio sp. MED222]
 gi|218321821|emb|CAV17789.1| Polar flagellar FlgC [Vibrio splendidus LGP32]
          Length = 137

 Score =  102 bits (253), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 36/137 (26%), Positives = 58/137 (42%), Gaps = 5/137 (3%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             L    ++  S ++ +S R+   S N+ANA +   +       R  +   E+       
Sbjct: 1   MSLFNVFNVTGSAMSAESVRLNTTSSNLANADSVSSSAKDTYKARHAVFGAELNQARNSG 60

Query: 62  R-----VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
                 V  I         E++P HP+AN  G +  PNVNV+ E A+M   +R Y  N+Q
Sbjct: 61  HTVPVKVLGIVESDKPLNAEYNPDHPLANNEGYIYKPNVNVMEEMANMISASRAYQTNVQ 120

Query: 117 TIKQSHDMMTTTLDLLR 133
               S  M+  TL + +
Sbjct: 121 VADSSKQMLLRTLQMGQ 137


>gi|332305613|ref|YP_004433464.1| flagellar basal-body rod protein FlgC [Glaciecola agarilytica
           4H-3-7+YE-5]
 gi|332172942|gb|AEE22196.1| flagellar basal-body rod protein FlgC [Glaciecola agarilytica
           4H-3-7+YE-5]
          Length = 140

 Score =  102 bits (253), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 37/138 (26%), Positives = 65/138 (47%), Gaps = 6/138 (4%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM------ 55
             L     IA++G++ QS R+   + N+ANA +   +       R  +   E+       
Sbjct: 1   MSLFNVMDIASTGMSAQSVRLNTTASNVANANSVSSSYDQTYKARHPVFAAELQRASQDQ 60

Query: 56  HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
           +   GV+V  +   Q+    E+ PGHP+A+ +G +  PNVN++ E ADM   ++ Y  N+
Sbjct: 61  NAGTGVQVLGVVESQAPLQIEYSPGHPMADENGYIYKPNVNIVEEMADMMSASKAYETNV 120

Query: 116 QTIKQSHDMMTTTLDLLR 133
           Q    +  +    L L +
Sbjct: 121 QVADTTKRLFRNVLRLGQ 138


>gi|84514835|ref|ZP_01002198.1| flagellar basal-body rod protein FlgC [Loktanella vestfoldensis
           SKA53]
 gi|84510994|gb|EAQ07448.1| flagellar basal-body rod protein FlgC [Loktanella vestfoldensis
           SKA53]
          Length = 139

 Score =  102 bits (253), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 36/139 (25%), Positives = 57/139 (41%), Gaps = 5/139 (3%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH---- 56
           M  +     IA   +A Q  R+  ++ NIANA T   +        + +           
Sbjct: 1   MADIKNVFDIAGRSMAAQMVRLNTVASNIANANTRSGSAEQTFRPLRPVFQTAFEGGIRN 60

Query: 57  -GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
                V VK+I           +PGHP+A+  G V  P V++  E  DM E +R Y  NL
Sbjct: 61  AERATVDVKEIVALDREAQRVHEPGHPLADEEGFVYMPPVDMNEELVDMLEASRQYQNNL 120

Query: 116 QTIKQSHDMMTTTLDLLRD 134
           + +     +M  T+D+ + 
Sbjct: 121 EVLTTMRTLMLRTVDMGKS 139


>gi|149375036|ref|ZP_01892809.1| flagellar basal-body rod protein C [Marinobacter algicola DG893]
 gi|149360925|gb|EDM49376.1| flagellar basal-body rod protein C [Marinobacter algicola DG893]
          Length = 149

 Score =  102 bits (253), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 45/148 (30%), Positives = 62/148 (41%), Gaps = 16/148 (10%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS----------- 50
             L     IA SG+  QS R+   + NIANA T   +       RK +            
Sbjct: 1   MSLGNIFDIAGSGMTAQSLRLNTTASNIANAETASSSTDQTYRARKPVFAAIQQSMLNPS 60

Query: 51  -----FEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
                F        GVRV+ I    +     ++P HP AN  G V YPNVNV+ E ADM 
Sbjct: 61  QQSLAFGSDTGPGAGVRVEGIVESDAELQMRYEPDHPAANEDGYVFYPNVNVVEEMADMM 120

Query: 106 ETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++R +  N+  +  +  MM   L L +
Sbjct: 121 SSSRSFQMNVDIMNSAKSMMQRILTLGQ 148


>gi|59712483|ref|YP_205259.1| flagellar basal body rod protein FlgC [Vibrio fischeri ES114]
 gi|197336337|ref|YP_002156702.1| flagellar basal-body rod protein FlgC [Vibrio fischeri MJ11]
 gi|24459275|gb|AAL86628.1| FlgC [Vibrio fischeri ES114]
 gi|59480584|gb|AAW86371.1| flagellar proximal rod protein FlgC [Vibrio fischeri ES114]
 gi|197317827|gb|ACH67274.1| flagellar basal-body rod protein FlgC [Vibrio fischeri MJ11]
          Length = 138

 Score =  102 bits (253), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 38/138 (27%), Positives = 64/138 (46%), Gaps = 6/138 (4%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV------M 55
             L    ++  S ++ +S R+   S N+ANA +   +       R+ +   E+       
Sbjct: 1   MSLFNVFNVTGSAMSAESVRLNTTSSNMANADSVSSSAAETYKARQAVFGAELSKAKYKQ 60

Query: 56  HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
             +  V+V  I   Q     E++P HP+AN  G +  PNVNV+ E A+M   +R Y  N+
Sbjct: 61  DHTVPVKVLGIVESQKPLRAEYNPDHPMANDDGYIFKPNVNVMEEMANMISASRSYQTNV 120

Query: 116 QTIKQSHDMMTTTLDLLR 133
           Q    S  M+ +TL + +
Sbjct: 121 QVADASKQMLQSTLRMGQ 138


>gi|239909138|ref|YP_002955880.1| flagellar basal-body rod protein FlgC [Desulfovibrio magneticus
           RS-1]
 gi|239799005|dbj|BAH77994.1| flagellar basal-body rod protein FlgC [Desulfovibrio magneticus
           RS-1]
          Length = 147

 Score =  102 bits (253), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 46/147 (31%), Positives = 66/147 (44%), Gaps = 14/147 (9%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRK-------------- 47
             L  +  I +SG++ Q   M  IS N+AN +TT    G  PY RK              
Sbjct: 1   MDLFTAMDIGSSGMSAQRTTMNTISMNLANIKTTRTVNGGGPYVRKSVMLESTPVDSPFS 60

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                       GV+V  +  D   F  +++PGHP ANA G V YP++NV+ E A+M   
Sbjct: 61  KAMQSAQDRDLAGVKVTSLVNDNRPFRMQYEPGHPDANADGYVAYPDINVVEEMANMITA 120

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLRD 134
            R Y A+  +I    +M    L++ R 
Sbjct: 121 MRSYEASSSSIGTVKNMFNKALEIGRS 147


>gi|260767921|ref|ZP_05876855.1| flagellar basal-body rod protein FlgC [Vibrio furnissii CIP 102972]
 gi|260615951|gb|EEX41136.1| flagellar basal-body rod protein FlgC [Vibrio furnissii CIP 102972]
 gi|315179624|gb|ADT86538.1| flagellar basal-body rod protein FlgC [Vibrio furnissii NCTC 11218]
          Length = 144

 Score =  101 bits (252), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 32/142 (22%), Positives = 58/142 (40%), Gaps = 10/142 (7%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE--------- 52
                   IA S +  Q+ R+  ++ N+ANA      P       K +            
Sbjct: 1   MPFTDIYSIAGSAMTAQTVRLNTVASNLANADAVSANPDDAYRALKPVFATVYNKSQLAT 60

Query: 53  -EVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
            + ++ S  VR+  +        + F+P +P+A+  G V YP+++V+ E ADM    R +
Sbjct: 61  GDNVYPSAEVRIVDVVQSAGQAEKRFEPHNPLADGDGYVYYPDIDVVAEMADMMSATRSF 120

Query: 112 MANLQTIKQSHDMMTTTLDLLR 133
             N++ +     M    L L +
Sbjct: 121 ETNVEVLSNVKSMQQGLLKLGQ 142


>gi|238924172|ref|YP_002937688.1| flagellar basal body rod protein [Eubacterium rectale ATCC 33656]
 gi|238875847|gb|ACR75554.1| flagellar basal body rod protein [Eubacterium rectale ATCC 33656]
 gi|291524901|emb|CBK90488.1| flagellar basal-body rod protein FlgC [Eubacterium rectale DSM
           17629]
          Length = 146

 Score =  101 bits (252), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 42/146 (28%), Positives = 68/146 (46%), Gaps = 14/146 (9%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR-------------KT 48
             L  + +I+ SG+  +  R  II++NIAN  TT    G+   R+             + 
Sbjct: 1   MGLFQAFNISASGMTAERFRTDIIAQNIANVNTTSTKEGTPYRRKIVTFSEKNVTPFSQI 60

Query: 49  ISFEEVMHGSGGVRVKKIGVD-QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
            S  +      GV+V  +  D  + F++E+DP +P A+A G V YPNVN + E  ++ + 
Sbjct: 61  YSSSKKAAVGNGVKVSSVTSDYSTDFIKEYDPSNPDADADGYVSYPNVNTVTEMTNLIDA 120

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y AN    + S  M    L + +
Sbjct: 121 TRAYEANATAFEASKSMAQNGLQIGK 146


>gi|254463002|ref|ZP_05076418.1| flagellar basal-body rod protein FlgC [Rhodobacterales bacterium
           HTCC2083]
 gi|206679591|gb|EDZ44078.1| flagellar basal-body rod protein FlgC [Rhodobacteraceae bacterium
           HTCC2083]
          Length = 139

 Score =  101 bits (252), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 32/139 (23%), Positives = 55/139 (39%), Gaps = 5/139 (3%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH---- 56
           M  +     IA   +A Q  R+  ++ NIANA     +        + +           
Sbjct: 1   MSDIKNVFDIAGRSMAAQMVRLNTVASNIANAEARAGSAEDAYRPLRPVFQTVFEDGMRN 60

Query: 57  -GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
                V V+ +       +   +PGHP+A+  G V    V+V  E  DM E +R Y  NL
Sbjct: 61  AERASVEVRDVIALDREPLRVHEPGHPLADEEGYVYIAPVDVNEEMVDMIEASRQYQNNL 120

Query: 116 QTIKQSHDMMTTTLDLLRD 134
           + +     +M  T+++ + 
Sbjct: 121 EVVTTMRTLMMRTVNMGKS 139


>gi|332994164|gb|AEF04219.1| flagellar basal-body rod protein FlgC [Alteromonas sp. SN2]
          Length = 140

 Score =  101 bits (252), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 34/138 (24%), Positives = 61/138 (44%), Gaps = 6/138 (4%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-- 59
             L     I+++G+  ++ R+   + NIANA +   +       R  +   E+    G  
Sbjct: 1   MSLFNVMSISSTGMEAENVRLNTTASNIANANSVSSSYDETYRARHPVFAAELQRAMGDQ 60

Query: 60  ----GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
               GV VK I    +    E+ P +P+A+  G +  PNVN++ E A+M   ++ Y  N+
Sbjct: 61  SKGVGVEVKGIVESDAPLQVEYAPHNPMADEEGYIYKPNVNIVEEMANMMSASKAYETNV 120

Query: 116 QTIKQSHDMMTTTLDLLR 133
           Q    +  +    L L +
Sbjct: 121 QVADTTKRIFRRVLQLGQ 138


>gi|325918875|ref|ZP_08180952.1| flagellar basal-body rod protein FlgC [Xanthomonas vesicatoria ATCC
           35937]
 gi|325534912|gb|EGD06831.1| flagellar basal-body rod protein FlgC [Xanthomonas vesicatoria ATCC
           35937]
          Length = 135

 Score =  101 bits (252), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 4/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-- 58
           M  L     +A S L  QS R+  I+ N+ANA +   +  +     + I   +       
Sbjct: 1   MSNL-PIFDVAGSALHAQSVRLSTIASNLANADSVAGSVEATYKPIEPIFQAQQSRQDPS 59

Query: 59  -GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
              V VK+I    +  +  ++PGHP+A+A G V  P+V+ + +  +M   +R Y A ++ 
Sbjct: 60  LTSVNVKEITTTNAPPIRRYEPGHPLADADGYVFSPDVDPVSQMVNMISASRNYQAGVEM 119

Query: 118 IKQSHDMMTTTLDLLR 133
           +  + ++   TL + R
Sbjct: 120 LNTAKELALATLTMGR 135


>gi|157738153|ref|YP_001490837.1| flagellar basal body rod protein FlgC [Arcobacter butzleri RM4018]
 gi|157700007|gb|ABV68167.1| flagellar basal body rod protein FlgC [Arcobacter butzleri RM4018]
          Length = 154

 Score =  101 bits (252), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 40/154 (25%), Positives = 72/154 (46%), Gaps = 21/154 (13%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-- 59
                  ++A SG++ Q  R+ ++S NIANA+TT    G    +++ +  + ++  +   
Sbjct: 1   MGFFDGYNVATSGMSAQRTRINVVSANIANAKTTHTAEGGPYKKQEVVFEDVLVANTNKR 60

Query: 60  -------------------GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVE 100
                              GV V+KI    +  V ++DP HP AN  G V YP++N ++E
Sbjct: 61  TNANDVETTNSPLSESSLRGVGVRKIIQSDAKPVLKYDPTHPDANEKGYVAYPDINPVIE 120

Query: 101 TADMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
             ++ E  R Y AN+ +      + + TL++L  
Sbjct: 121 MVNLIEAMRSYEANVTSFNTHRGIDSKTLEILNS 154


>gi|294679035|ref|YP_003579650.1| flagellar basal-body rod protein FlgC [Rhodobacter capsulatus SB
           1003]
 gi|294477855|gb|ADE87243.1| flagellar basal-body rod protein FlgC [Rhodobacter capsulatus SB
           1003]
          Length = 131

 Score =  101 bits (252), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 49/137 (35%), Positives = 75/137 (54%), Gaps = 11/137 (8%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG--- 57
           M    ++  ++ SGL  QS R++ +SENIANA T G       Y RK + FEE+      
Sbjct: 1   MGDFTSTLSVSASGLKAQSMRLRHVSENIANADTPG-------YHRKVVRFEELAAQKDG 53

Query: 58  -SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
            + GV +  + +DQ      +DPG P+A+ +G     NV+++VE AD R+  R Y ANL+
Sbjct: 54  GATGVELGPVELDQKELARIYDPGSPLADENGYYDGSNVDLVVEIADARQAQRSYEANLR 113

Query: 117 TIKQSHDMMTTTLDLLR 133
              Q+  M +  ++LLR
Sbjct: 114 MFDQTRQMSSALMELLR 130


>gi|291529042|emb|CBK94628.1| flagellar basal-body rod protein FlgC [Eubacterium rectale M104/1]
          Length = 146

 Score =  101 bits (252), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 42/146 (28%), Positives = 68/146 (46%), Gaps = 14/146 (9%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR-------------KT 48
             L  + +I+ SG+  +  R  II++NIAN  TT    G+   R+             + 
Sbjct: 1   MGLFQAFNISASGMTAERFRTDIIAQNIANVNTTSTKGGTPYRRKIVTFSEKNVTPFSQI 60

Query: 49  ISFEEVMHGSGGVRVKKIGVD-QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
            S  +      GV+V  +  D  + F++E+DP +P A+A G V YPNVN + E  ++ + 
Sbjct: 61  YSSSKKAAVGNGVKVSSVTSDYSTDFIKEYDPSNPDADADGYVSYPNVNTVTEMTNLIDA 120

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y AN    + S  M    L + +
Sbjct: 121 TRAYEANATAFEASKSMAQNGLQIGK 146


>gi|261407986|ref|YP_003244227.1| flagellar basal-body rod protein FlgC [Paenibacillus sp. Y412MC10]
 gi|329929277|ref|ZP_08283030.1| flagellar basal-body rod protein FlgC [Paenibacillus sp. HGF5]
 gi|261284449|gb|ACX66420.1| flagellar basal-body rod protein FlgC [Paenibacillus sp. Y412MC10]
 gi|328936646|gb|EGG33089.1| flagellar basal-body rod protein FlgC [Paenibacillus sp. HGF5]
          Length = 149

 Score =  101 bits (252), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 52/149 (34%), Positives = 71/149 (47%), Gaps = 17/149 (11%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTG---DTPGSDPYRRKTISFEEVM--- 55
             +  S  I  S L  Q  RM +IS NIANA TT    +   + PYRRKT+ F+      
Sbjct: 1   MNISNSFGINASALTAQRLRMDVISSNIANAETTRARIENGQAVPYRRKTVVFQPQQESF 60

Query: 56  -----------HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
                      +   GV+V ++  DQS   + ++P HP ANA G V  PNV++  E  DM
Sbjct: 61  EGLLRAQMNGQNAGQGVKVAQVREDQSPLKQVYNPTHPDANAEGYVFMPNVDITKEMVDM 120

Query: 105 RETNRLYMANLQTIKQSHDMMTTTLDLLR 133
               R Y AN+  I  S  M+   L++ R
Sbjct: 121 LAATRSYEANVTAINASKAMIMKALEIGR 149


>gi|32266907|ref|NP_860939.1| flagellar basal body rod protein FlgC [Helicobacter hepaticus ATCC
           51449]
 gi|32262959|gb|AAP78005.1| flagellar basal body rod protein FlgC [Helicobacter hepaticus ATCC
           51449]
          Length = 163

 Score =  101 bits (252), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 47/161 (29%), Positives = 69/161 (42%), Gaps = 31/161 (19%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF------------ 51
            ++S  I+  GL+ Q  R+  IS NIANA TT    G    RR+ I              
Sbjct: 2   FLSSFDISGYGLSAQRVRINTISSNIANANTTRTDEGGPYRRREVIFRAFDFNKVLNEKL 61

Query: 52  -------------------EEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKY 92
                              +E       V + KI  D    + ++DP HP AN+ G V Y
Sbjct: 62  GKNNQQLRYEDPLNEGDLGKEPKPAIMSVYIPKIVRDDREPLMKYDPSHPDANSEGYVAY 121

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           PNVN +VE AD+ E  R Y AN+   + + +M +  + + +
Sbjct: 122 PNVNPVVEMADLIEATRAYQANVAAFQSAKNMASNAITMFQ 162


>gi|328947992|ref|YP_004365329.1| flagellar basal-body rod protein FlgC [Treponema succinifaciens DSM
           2489]
 gi|328448316|gb|AEB14032.1| flagellar basal-body rod protein FlgC [Treponema succinifaciens DSM
           2489]
          Length = 153

 Score =  101 bits (252), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 47/150 (31%), Positives = 67/150 (44%), Gaps = 20/150 (13%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-- 59
             L  S +IA +G++V+  R  +IS NIANA TT    G    ++  I            
Sbjct: 1   MGLFTSINIAATGMSVERLRTDVISNNIANATTTRTQEGGAYRKQSVIVEPIASSNPQWR 60

Query: 60  --------------GVRVKKIGVDQSTFVEEFDPGHPVA----NASGIVKYPNVNVLVET 101
                         GVRV++I  D       +DP HP A       G V+YPNVN++ E 
Sbjct: 61  FPFVDSELDNGPGKGVRVREIIKDSEQGRMVYDPSHPDAIQSGPNKGYVEYPNVNIVNEM 120

Query: 102 ADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            +M   NR Y AN   I+ S +M  + L++
Sbjct: 121 VNMISANRAYEANSSVIQGSKEMFASALEI 150


>gi|329890582|ref|ZP_08268925.1| flagellar basal-body rod protein FlgC [Brevundimonas diminuta ATCC
           11568]
 gi|328845883|gb|EGF95447.1| flagellar basal-body rod protein FlgC [Brevundimonas diminuta ATCC
           11568]
          Length = 144

 Score =  101 bits (252), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 58/129 (44%), Positives = 84/129 (65%), Gaps = 1/129 (0%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV-MHGSGGVRVK 64
            +  +A+S L  Q +RM+II+ENIANA +T +  G  PYRR+T  F+   + G+ GV + 
Sbjct: 15  TAMAVASSALKAQQSRMRIIAENIANAESTANVAGGQPYRRQTPVFQARNVDGATGVVLA 74

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           ++  DQS F  ++DP HP ANA G V+ PNV+ LVE  DMRE  R Y ANL  I+ + +M
Sbjct: 75  EVRPDQSDFRMDYDPSHPAANAEGYVQRPNVDTLVEAMDMREAQRAYEANLNVIETARNM 134

Query: 125 MTTTLDLLR 133
            + TLD+++
Sbjct: 135 DSRTLDIIK 143


>gi|226225740|ref|YP_002759846.1| flagellar basal-body rod protein FlgC [Gemmatimonas aurantiaca
           T-27]
 gi|226088931|dbj|BAH37376.1| flagellar basal-body rod protein FlgC [Gemmatimonas aurantiaca
           T-27]
          Length = 183

 Score =  101 bits (252), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 43/183 (23%), Positives = 69/183 (37%), Gaps = 52/183 (28%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-- 58
           M  +  S  IA SG++ Q  RM+ I++NIANA  T  T G+   RR+ +        +  
Sbjct: 1   MRPMFKSMGIAASGISAQRQRMETIAQNIANADVTRGTDGTPYKRREVVLESATAQNALF 60

Query: 59  --------------------------------------------------GGVRVKKIGV 68
                                                              GVRV  +  
Sbjct: 61  NPGNVTAQTLGNQNVAGAPAFEVPITDAAQTFQVPVLPVTGGADGVMGGEFGVRVAGVAE 120

Query: 69  DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
           DQ      ++PGHP A+ +G V+YP+++   E   + +  R+Y AN    + +  M+   
Sbjct: 121 DQGEGRLVYEPGHPDADGNGYVRYPDIDTTQELVKLMDAKRIYEANAAVFQTAKSMLRAA 180

Query: 129 LDL 131
           LD+
Sbjct: 181 LDI 183


>gi|327441057|dbj|BAK17422.1| flagellar basal body rod protein [Solibacillus silvestris StLB046]
          Length = 154

 Score =  101 bits (251), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 47/153 (30%), Positives = 71/153 (46%), Gaps = 21/153 (13%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGD---TPGSDPYRRKTISFEEVMHG- 57
             +  S +   S L  Q  RM +IS NIAN  TT         +PYR+K+++ +E     
Sbjct: 1   MSIFHSMNTTASALTTQRLRMDVISSNIANVDTTRAKQVNGEWEPYRKKSVTLKEQEGQF 60

Query: 58  ----------------SGGVRVKKIGVD-QSTFVEEFDPGHPVANASGIVKYPNVNVLVE 100
                             GV+V  I  D ++ F   +DP HP ANA G V+  NV+VL E
Sbjct: 61  SNFLNMAIGKTEKNGIGNGVKVSSIKEDTETPFKLMYDPSHPDANAEGYVQMSNVDVLKE 120

Query: 101 TADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             D+   +R Y AN+     + +M+T  L++ +
Sbjct: 121 MVDLISASRSYEANITAFNANKNMLTKALEIGK 153


>gi|289666045|ref|ZP_06487626.1| flagellar basal body rod protein FlgC [Xanthomonas campestris pv.
           vasculorum NCPPB702]
          Length = 135

 Score =  101 bits (251), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 4/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-- 58
           M  L     +A S L  QS R+  I+ N+ANA +   +  +     + I   +       
Sbjct: 1   MSNL-PIFDVAGSALHAQSVRLSTIASNLANADSVAGSAEATYKPIEPIFQAQQSRRDPS 59

Query: 59  -GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
              V VK+I    +  +  ++PGHP+A+A G V  P+V+ + +  +M   +R Y A ++ 
Sbjct: 60  LTSVNVKEITTTNAPPIRRYEPGHPLADAEGYVFSPDVDPVSQMVNMISASRNYQAGVEM 119

Query: 118 IKQSHDMMTTTLDLLR 133
           +  + ++   TL + R
Sbjct: 120 LNTAKELALATLTMGR 135


>gi|54307268|ref|YP_128288.1| FlgC flagellar basal-body rod protein [Photobacterium profundum
           SS9]
 gi|46911688|emb|CAG18486.1| Hypothetical FlgC flagellar basal-body rod protein [Photobacterium
           profundum SS9]
          Length = 138

 Score =  101 bits (251), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 31/138 (22%), Positives = 60/138 (43%), Gaps = 5/138 (3%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
                   IA S ++ Q+ R+  ++ N+ANA     +  +  + ++ +    ++     V
Sbjct: 1   MSFSTIYDIAGSAMSAQTIRLNTVASNLANADVVSGSDKTGYHAKRPVFSTVMIDMDSPV 60

Query: 62  RVKKIGVDQ-----STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
              K+ +D            ++P HP AN  G V +  VNV+ E ADM   +R +  N+ 
Sbjct: 61  PGAKVQIDDVIESTEPLRRRYEPNHPKANNEGYVFHSTVNVVEEMADMMAASRNFETNVN 120

Query: 117 TIKQSHDMMTTTLDLLRD 134
            + ++  M  + L L + 
Sbjct: 121 VMSRARSMQQSILRLGQS 138


>gi|103488385|ref|YP_617946.1| flagellar basal-body rod protein FlgC [Sphingopyxis alaskensis
           RB2256]
 gi|98978462|gb|ABF54613.1| flagellar basal-body rod protein FlgC [Sphingopyxis alaskensis
           RB2256]
          Length = 267

 Score =  101 bits (251), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 30/134 (22%), Positives = 59/134 (44%), Gaps = 1/134 (0%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-G 59
           M+   +   I+   ++ Q  R+   + N+ANA T   +        K +    +      
Sbjct: 134 MNGSFSVFDISGRAMSAQLVRLNTTASNLANAGTVAGSEAGAFRSLKPVFRTVMDDHGRA 193

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
            V++ +I   +    +  DP +P+A+A G V    V+   E  +M ET R Y  N+Q ++
Sbjct: 194 TVQIDQITTSKMAPSKRHDPSNPLADADGNVWEAAVDSAAELVEMVETARQYQNNVQVLE 253

Query: 120 QSHDMMTTTLDLLR 133
            +  ++  TL + +
Sbjct: 254 TAKGLINETLRMGQ 267


>gi|224437870|ref|ZP_03658817.1| flagellar basal body rod protein FlgC [Helicobacter cinaedi CCUG
           18818]
 gi|313144319|ref|ZP_07806512.1| flagellar basal body rod protein FlgC [Helicobacter cinaedi CCUG
           18818]
 gi|313129350|gb|EFR46967.1| flagellar basal body rod protein FlgC [Helicobacter cinaedi CCUG
           18818]
          Length = 163

 Score =  101 bits (251), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 46/161 (28%), Positives = 70/161 (43%), Gaps = 31/161 (19%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF------------ 51
            ++S  I+  GL+ Q  R+  IS NIANA TT    G    RR+ +              
Sbjct: 2   FLSSFDISGYGLSAQRVRVNTISSNIANANTTRTDEGGPYRRREVVFRAFDFNKILNEKL 61

Query: 52  -------------------EEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKY 92
                              +E       V ++KI  D    + ++DP HP AN+ G V Y
Sbjct: 62  GKNNQQLKYEDPLNEGDLGKEPKPAIMSVYIQKIVRDDREPLMKYDPSHPDANSEGYVAY 121

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           PNVN +VE AD+ E  R Y AN+   + + +M +  + + +
Sbjct: 122 PNVNPVVEMADLIEATRAYQANVAAFQSAKNMASNAITMFQ 162


>gi|78047588|ref|YP_363763.1| flagellar basal body rod protein FlgC [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|84624086|ref|YP_451458.1| flagellar basal body rod protein FlgC [Xanthomonas oryzae pv.
           oryzae MAFF 311018]
 gi|166712064|ref|ZP_02243271.1| flagellar basal body rod protein FlgC [Xanthomonas oryzae pv.
           oryzicola BLS256]
 gi|188576754|ref|YP_001913683.1| flagellar basal body rod protein FlgC [Xanthomonas oryzae pv.
           oryzae PXO99A]
 gi|188576945|ref|YP_001913874.1| flagellar basal body rod protein FlgC [Xanthomonas oryzae pv.
           oryzae PXO99A]
 gi|325927873|ref|ZP_08189097.1| flagellar basal-body rod protein FlgC [Xanthomonas perforans
           91-118]
 gi|78036018|emb|CAJ23709.1| flagellar basal body rod protein [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|84368026|dbj|BAE69184.1| flagellar biosynthesis protein [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|188521206|gb|ACD59151.1| flagellar basal-body rod protein FlgC [Xanthomonas oryzae pv.
           oryzae PXO99A]
 gi|188521397|gb|ACD59342.1| flagellar basal-body rod protein FlgC [Xanthomonas oryzae pv.
           oryzae PXO99A]
 gi|325541713|gb|EGD13231.1| flagellar basal-body rod protein FlgC [Xanthomonas perforans
           91-118]
          Length = 135

 Score =  101 bits (251), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 4/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-- 58
           M  L     +A S L  QS R+  I+ N+ANA +   +  +     + I   +       
Sbjct: 1   MSNL-PIFDVAGSALHAQSVRLSTIASNLANADSVAGSAEATYKPIEPIFQAQQSRQDPS 59

Query: 59  -GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
              V VK+I    +  +  ++PGHP+A+A G V  P+V+ + +  +M   +R Y A ++ 
Sbjct: 60  LTSVNVKEITTTNAPPIRRYEPGHPLADADGYVFSPDVDPVSQMVNMISASRNYQAGVEM 119

Query: 118 IKQSHDMMTTTLDLLR 133
           +  + ++   TL + R
Sbjct: 120 LNTAKELALATLTMGR 135


>gi|224825775|ref|ZP_03698879.1| flagellar basal-body rod protein FlgC [Lutiella nitroferrum 2002]
 gi|224601999|gb|EEG08178.1| flagellar basal-body rod protein FlgC [Lutiella nitroferrum 2002]
          Length = 140

 Score =  101 bits (251), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 34/138 (24%), Positives = 59/138 (42%), Gaps = 7/138 (5%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH----- 56
                 + IA S +  Q+ R+  ++ N+ANA +   + G+    RK +            
Sbjct: 1   MAFRDISRIAGSAMTAQTVRLNTVASNLANAESASGSEGAAFRARKPVFATVYRGADSDG 60

Query: 57  --GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
                 V+V  +    S   +  +P +P+A+A G V YPNVN + E  DM   +R +  N
Sbjct: 61  AWQGASVQVLDVVKSDSPLRKVHEPSNPLADADGNVFYPNVNPVEEMTDMMSASRAFQTN 120

Query: 115 LQTIKQSHDMMTTTLDLL 132
           ++ + +   M    L L 
Sbjct: 121 VEVLARVKTMQQDLLKLG 138


>gi|254255085|ref|ZP_04948402.1| Flagellar basal body rod protein [Burkholderia dolosa AUO158]
 gi|124899730|gb|EAY71573.1| Flagellar basal body rod protein [Burkholderia dolosa AUO158]
          Length = 133

 Score =  101 bits (251), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 36/132 (27%), Positives = 60/132 (45%), Gaps = 1/132 (0%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M      + IA S +A Q+ R+  I+ N+ANA T   T G+    RK +           
Sbjct: 1   MMSFKDISQIAGSAMAAQTVRLDTIASNLANADT-AGTEGTAYRARKPVFAAVYEGHGAR 59

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V+V  +         +++PG P+A+ +G+V Y NV+ + E  DM   +R +  N + + +
Sbjct: 60  VQVLDVIELDDPPAAKYEPGSPLADENGMVYYSNVSAVEEMTDMMAASRAFSTNAEVLSR 119

Query: 121 SHDMMTTTLDLL 132
              M    L L 
Sbjct: 120 VKAMQQDLLRLG 131


>gi|109899404|ref|YP_662659.1| flagellar basal-body rod protein FlgC [Pseudoalteromonas atlantica
           T6c]
 gi|109701685|gb|ABG41605.1| flagellar basal-body rod protein FlgC [Pseudoalteromonas atlantica
           T6c]
          Length = 140

 Score =  101 bits (251), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 37/138 (26%), Positives = 64/138 (46%), Gaps = 6/138 (4%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM------ 55
             L     IA++G++ QS R+   + N+ANA +   +       R  +   E+       
Sbjct: 1   MSLFNVMDIASTGMSAQSVRLNTTASNVANANSVSSSYDQTYKARHPVFAAELQRASQDQ 60

Query: 56  HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
           +   GV+V  I    +    E+ PGHP+A+ +G +  PNVN++ E ADM   ++ Y  N+
Sbjct: 61  NAGTGVQVMGIVESDAPLQIEYSPGHPMADENGYIYKPNVNIVEEMADMMSASKAYETNV 120

Query: 116 QTIKQSHDMMTTTLDLLR 133
           Q    +  +    L L +
Sbjct: 121 QVADTTKRLFRNVLRLGQ 138


>gi|21242729|ref|NP_642311.1| flagellar basal body rod protein FlgC [Xanthomonas axonopodis pv.
           citri str. 306]
 gi|294625272|ref|ZP_06703911.1| flagellar biosynthesis cell-proximal portion of basal-body rod
           [Xanthomonas fuscans subsp. aurantifolii str. ICPB
           11122]
 gi|294664589|ref|ZP_06729930.1| flagellar biosynthesis cell-proximal portion of basal-body rod
           [Xanthomonas fuscans subsp. aurantifolii str. ICPB
           10535]
 gi|21108205|gb|AAM36847.1| flagellar biosynthesis cell-proximal portion of basal-body rod
           [Xanthomonas axonopodis pv. citri str. 306]
 gi|268589170|gb|ACZ06861.1| flagella basal body rod protein [Xanthomonas axonopodis pv.
           glycines]
 gi|292600446|gb|EFF44544.1| flagellar biosynthesis cell-proximal portion of basal-body rod
           [Xanthomonas fuscans subsp. aurantifolii str. ICPB
           11122]
 gi|292605646|gb|EFF48956.1| flagellar biosynthesis cell-proximal portion of basal-body rod
           [Xanthomonas fuscans subsp. aurantifolii str. ICPB
           10535]
          Length = 135

 Score =  101 bits (251), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 4/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-- 58
           M  L     +A S L  QS R+  I+ N+ANA +   +  +     + I   +       
Sbjct: 1   MSNL-PIFDVAGSALHAQSVRLSTIASNLANADSVAGSAEATYKPIEPIFQAQQSRQDPS 59

Query: 59  -GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
              V VK+I    +  +  ++PGHP+A+A G V  P+V+ + +  +M   +R Y A ++ 
Sbjct: 60  LTSVNVKEITTTNAPPIRRYEPGHPLADAEGYVFSPDVDPVSQMVNMISASRNYQAGVEM 119

Query: 118 IKQSHDMMTTTLDLLR 133
           +  + ++   TL + R
Sbjct: 120 LNTAKELALATLTMGR 135


>gi|296531769|ref|ZP_06894591.1| flagellar basal-body rod protein FlgC [Roseomonas cervicalis ATCC
           49957]
 gi|296267908|gb|EFH13713.1| flagellar basal-body rod protein FlgC [Roseomonas cervicalis ATCC
           49957]
          Length = 146

 Score =  101 bits (251), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 54/135 (40%), Positives = 78/135 (57%), Gaps = 3/135 (2%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV- 61
            L  +   A SG+  Q+ RM++ +ENIANA +T   PG D YRRK I+F+  +  + G  
Sbjct: 12  PLTQAMATAASGMNTQATRMRVSAENIANASSTAAVPGGDAYRRKLITFDRAVDRATGAQ 71

Query: 62  --RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
             R+  I  D   F  ++DP HP A+  G VK PNV+ LVE AD+R   R Y A++  ++
Sbjct: 72  LVRMDSIRNDPRDFRTQYDPAHPAADERGYVKLPNVDTLVEQADLRAAGRSYEASMAVLQ 131

Query: 120 QSHDMMTTTLDLLRD 134
           Q+  +   TLD+LR 
Sbjct: 132 QARALYGKTLDILRS 146


>gi|291277450|ref|YP_003517222.1| flagellar basal-body rod protein [Helicobacter mustelae 12198]
 gi|290964644|emb|CBG40498.1| flagellar basal-body rod protein [Helicobacter mustelae 12198]
          Length = 164

 Score =  101 bits (251), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 47/163 (28%), Positives = 68/163 (41%), Gaps = 31/163 (19%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG---- 57
              ++S  I+  GL+ Q  R  IIS NIANA TT    G    R++ +      +     
Sbjct: 1   MAFLSSFDISGYGLSAQRFRTNIISSNIANANTTRTDEGGPYRRQEVVFKAFDFNKILNE 60

Query: 58  ---------------------------SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
                                         V V K+  D    + ++DP HP ANA G V
Sbjct: 61  KIAKENENLAYEDPLDEKEFGKLPKPAIMSVYVDKVVRDDREPLMKYDPSHPDANADGYV 120

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            YPNVN +VE AD+ E  R Y AN+   + + +M    + +L+
Sbjct: 121 AYPNVNPVVEMADLIEATRAYQANVAAFQSAKNMANNAITMLQ 163


>gi|27363707|ref|NP_759235.1| flagellar basal body rod protein FlgC [Vibrio vulnificus CMCP6]
 gi|37679145|ref|NP_933754.1| flagellar basal body rod protein FlgC [Vibrio vulnificus YJ016]
 gi|320157111|ref|YP_004189490.1| flagellar basal-body rod protein FlgC [Vibrio vulnificus MO6-24/O]
 gi|27359823|gb|AAO08762.1| flagellar basal-body rod protein FlgC [Vibrio vulnificus CMCP6]
 gi|37197887|dbj|BAC93725.1| flagellar basal body rod protein FlgC [Vibrio vulnificus YJ016]
 gi|319932423|gb|ADV87287.1| flagellar basal-body rod protein FlgC [Vibrio vulnificus MO6-24/O]
          Length = 138

 Score =  101 bits (251), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 36/138 (26%), Positives = 60/138 (43%), Gaps = 6/138 (4%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             L    ++  S ++ +S R+   S N+ANA +   +       R  +   E+ +     
Sbjct: 1   MSLFNVFNVTGSAMSAESVRLNTTSSNLANADSVSSSAKDTYKARHAVFGAELSNAMYNR 60

Query: 62  ------RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
                 +V  I         E++P HP+AN  G +  PNVNV+ E A+M   +R Y  N+
Sbjct: 61  GDTVPVKVLGIVESDKPLSAEYNPEHPLANDEGYIYKPNVNVMEEMANMISASRAYQTNV 120

Query: 116 QTIKQSHDMMTTTLDLLR 133
           Q    S  M+  TL + +
Sbjct: 121 QVADASKQMLLRTLQMGQ 138


>gi|254438373|ref|ZP_05051867.1| flagellar basal-body rod protein FlgC [Octadecabacter antarcticus
           307]
 gi|198253819|gb|EDY78133.1| flagellar basal-body rod protein FlgC [Octadecabacter antarcticus
           307]
          Length = 138

 Score =  101 bits (250), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 33/138 (23%), Positives = 54/138 (39%), Gaps = 5/138 (3%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH---- 56
           M  L     IA   +A Q  R+  ++ NIANA     +        + +           
Sbjct: 1   MSDLKNVFDIAGRSMAAQMVRLNTVASNIANANARAGSAEETFRPLRPVFKVAFEDGLRD 60

Query: 57  -GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
                V V  I       +   +PGHP+A+  G V    V+V  E  DM E +R +  NL
Sbjct: 61  AERSTVDVVDIVSLDRLPLRVLEPGHPLADEEGFVYVAPVDVNEEMVDMLEASRQFQNNL 120

Query: 116 QTIKQSHDMMTTTLDLLR 133
           + +     +M  T+++ +
Sbjct: 121 EVVTTMRTLMLRTVNMGQ 138


>gi|21231399|ref|NP_637316.1| flagellar basal body rod protein FlgC [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66768548|ref|YP_243310.1| flagellar basal body rod protein FlgC [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|21113065|gb|AAM41240.1| flagellar biosynthesis, cell-proximal portion of basal-body rod
           [Xanthomonas campestris pv. campestris str. ATCC 33913]
 gi|66573880|gb|AAY49290.1| flagellar biosynthesis, cell-proximal portion of basal-body rod
           [Xanthomonas campestris pv. campestris str. 8004]
          Length = 135

 Score =  101 bits (250), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 4/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-- 58
           M  L     +A S L  QS R+  I+ N+ANA +   +  +     + I   +       
Sbjct: 1   MSNL-PIFDVAGSALHAQSVRLSTIASNLANADSIAGSAEATYKPIEPIFQAQQNRQDPS 59

Query: 59  -GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
              V VK+I    +  +  ++PGHP+A+A G V  P+V+ + +  +M   +R Y A ++ 
Sbjct: 60  LTSVNVKEITTTNAPPIRRYEPGHPLADADGYVFSPDVDPVSQMVNMISASRNYQAGVEM 119

Query: 118 IKQSHDMMTTTLDLLR 133
           +  + ++   TL + R
Sbjct: 120 LNTAKELALATLTMGR 135


>gi|188991643|ref|YP_001903653.1| flagellar basal body rod protein FlgC [Xanthomonas campestris pv.
           campestris str. B100]
 gi|167733403|emb|CAP51604.1| unnamed protein product [Xanthomonas campestris pv. campestris]
          Length = 135

 Score =  101 bits (250), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 4/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-- 58
           M  L     +A S L  QS R+  I+ N+ANA +   +  +     + I   +       
Sbjct: 1   MSNL-PIFDVAGSALHAQSVRLSTIASNLANADSVAGSAEATYKPIEPIFQAQQNRQDPS 59

Query: 59  -GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
              V VK+I    +  +  ++PGHP+A+A G V  P+V+ + +  +M   +R Y A ++ 
Sbjct: 60  LTSVNVKEITTTNAPPIRRYEPGHPLADADGYVFSPDVDPVSQMVNMISASRNYQAGVEM 119

Query: 118 IKQSHDMMTTTLDLLR 133
           +  + ++   TL + R
Sbjct: 120 LNTAKELALATLTMGR 135


>gi|119503642|ref|ZP_01625725.1| flagellar basal-body rod protein FlgC [marine gamma proteobacterium
           HTCC2080]
 gi|119460704|gb|EAW41796.1| flagellar basal-body rod protein FlgC [marine gamma proteobacterium
           HTCC2080]
          Length = 134

 Score =  101 bits (250), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 39/134 (29%), Positives = 63/134 (47%), Gaps = 2/134 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-- 59
             L  S  IA + L+ Q+ R+  I+ N+ANA +   T       R  I    +   S   
Sbjct: 1   MSLFDSMSIAGTALSAQTTRINTIASNMANANSVSSTAEDTFKARAPIFQAVLEGESDQL 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GVRV  I        +EF+P HP+AN  G +  P+++V  + A+M   +R + + ++ I 
Sbjct: 61  GVRVTSIEEVGGEARQEFEPAHPLANEEGFIYKPDIDVTQQMANMMSASRSFQSAIEVIN 120

Query: 120 QSHDMMTTTLDLLR 133
            S  +   TL L +
Sbjct: 121 TSKQLALRTLTLGK 134


>gi|190574265|ref|YP_001972110.1| flagellar basal body rod protein FlgC [Stenotrophomonas maltophilia
           K279a]
 gi|190012187|emb|CAQ45810.1| putative flagellar basal-body rod protein FlgC [Stenotrophomonas
           maltophilia K279a]
          Length = 135

 Score =  101 bits (250), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 35/136 (25%), Positives = 66/136 (48%), Gaps = 4/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF---EEVMHG 57
           M  L     IA S L  QS RM  I+ N++NA T   +  +     + I      +    
Sbjct: 1   MSNL-PIFDIAGSALQAQSVRMSTIASNLSNADTVAGSADAVYKPLEPIFQAVTSKNDPN 59

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
              V+VK+I    +  ++ ++PGHP+A+  G +  P+V+ + +  ++  T+R Y A ++ 
Sbjct: 60  ITSVKVKEITQSDAAPIKRYEPGHPLADGDGYIYQPDVDPVAQMVNLISTSRNYQAGVEM 119

Query: 118 IKQSHDMMTTTLDLLR 133
           +  + ++   TL + R
Sbjct: 120 LTTAKELALATLTMGR 135


>gi|114566383|ref|YP_753537.1| flagellar basal body rod protein [Syntrophomonas wolfei subsp.
           wolfei str. Goettingen]
 gi|114337318|gb|ABI68166.1| flagellar basal body rod protein [Syntrophomonas wolfei subsp.
           wolfei str. Goettingen]
          Length = 155

 Score =  101 bits (250), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 44/155 (28%), Positives = 68/155 (43%), Gaps = 23/155 (14%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
              + S   + SGL  Q  RM  I+ N+AN  TT     + PYRR+ + FE     +   
Sbjct: 1   MGFLNSIDTSASGLTAQRLRMDTIASNMANVETTRVDNRTGPYRRQVVVFEARNASAPKK 60

Query: 62  R-----------------------VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVL 98
           R                       +++I  +++ +   +DP HP A+  G V YPNVN++
Sbjct: 61  RFQRFLEEQSQTFNAANSGVRVKQIREINENEAPYRRVYDPSHPEADNEGYVNYPNVNIV 120

Query: 99  VETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            E  +M    R Y AN Q I+ +  +    LD+ R
Sbjct: 121 EEMINMISATRAYEANAQVIEATKSIAMRALDIGR 155


>gi|323492340|ref|ZP_08097493.1| flagellar basal body rod protein FlgC [Vibrio brasiliensis LMG
           20546]
 gi|323313387|gb|EGA66498.1| flagellar basal body rod protein FlgC [Vibrio brasiliensis LMG
           20546]
          Length = 144

 Score =  101 bits (250), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 34/142 (23%), Positives = 60/142 (42%), Gaps = 10/142 (7%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDP----------YRRKTISF 51
                   IA S +  Q+ R+  ++ N+ANA      P              Y +  ++ 
Sbjct: 1   MSFTDIYSIAGSAMNAQTVRLNTVASNLANADAVSANPDDAYKALKPVFATVYNKTQLTA 60

Query: 52  EEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
            E  + +  VR+  +   +    + F+P +P+AN  G V YP+V+V+ E ADM    R +
Sbjct: 61  SEGAYPNAEVRIVDVVQSEGKAEKRFEPSNPLANDEGYVYYPDVDVVSEMADMMSATRSF 120

Query: 112 MANLQTIKQSHDMMTTTLDLLR 133
             N++ +     M    L L +
Sbjct: 121 ETNVEVLTNVKSMQQGLLKLGQ 142


>gi|295097205|emb|CBK86295.1| flagellar basal-body rod protein FlgC [Enterobacter cloacae subsp.
           cloacae NCTC 9394]
          Length = 134

 Score =  101 bits (250), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 39/134 (29%), Positives = 67/134 (50%), Gaps = 2/134 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM--HGSG 59
             L +   I+ S +A QS R+ + + N+ANA +     G     R+ +   +     G G
Sbjct: 1   MSLFSVFDISGSAMAAQSKRLNVSASNMANADSVAGPDGQPYRARQVMFEADTSAGQGIG 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GVRV  +    +     ++PG+P+A+  G V+ PNVNV+ E  +    +R Y AN++ + 
Sbjct: 61  GVRVSDVVESTAPDRLVYEPGNPLADEQGYVRMPNVNVVNEMVNTISASRSYQANVEVMN 120

Query: 120 QSHDMMTTTLDLLR 133
            +  +M  TL L +
Sbjct: 121 SARALMQKTLTLGQ 134


>gi|254785369|ref|YP_003072798.1| flagellar basal body rod protein FlgC [Teredinibacter turnerae
           T7901]
 gi|237685992|gb|ACR13256.1| flagellar basal-body rod protein FlgC [Teredinibacter turnerae
           T7901]
          Length = 145

 Score =  101 bits (250), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 37/145 (25%), Positives = 61/145 (42%), Gaps = 13/145 (8%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF---------- 51
             L    ++A SG+  QS R+   + NIANA  +  +  +    R  +            
Sbjct: 1   MSLSNIFNVAGSGMNAQSIRLNTTASNIANAEASSASADTTYRGRHPVFASVQAAMLNGG 60

Query: 52  ---EEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                    + GVRV  I   Q+     ++P  P A+  G V YPNVNV+ E  +M   +
Sbjct: 61  DALYSEDQSAVGVRVDGIVESQAPLQPRYEPESPNADEDGYVYYPNVNVVEEMTNMISAS 120

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R +  N++ +  +  M+   L L +
Sbjct: 121 RSFQVNVEVMNSAKQMVQRVLTLGQ 145


>gi|86139479|ref|ZP_01058048.1| flagellar basal-body rod protein FlgC [Roseobacter sp. MED193]
 gi|85823982|gb|EAQ44188.1| flagellar basal-body rod protein FlgC [Roseobacter sp. MED193]
          Length = 130

 Score =  101 bits (250), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 46/133 (34%), Positives = 71/133 (53%), Gaps = 4/133 (3%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M     S  +  SGL  Q+ R++ +SENI+NA T G    S P+        +V     G
Sbjct: 1   MSEFSNSLSVTASGLKAQATRLRHVSENISNADTPGYRRKSVPFEAARDLENDVERVKTG 60

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
               ++ +D+S     +DP HP+A+ SG  +  NV++++E AD RE  R Y ANL+  +Q
Sbjct: 61  ----RVVLDRSDLENVYDPSHPLADESGHYEGSNVDLMIEIADAREAQRSYDANLKMFEQ 116

Query: 121 SHDMMTTTLDLLR 133
           +  M  + +DLLR
Sbjct: 117 TRGMSASLMDLLR 129


>gi|78776565|ref|YP_392880.1| flagellar basal body rod protein FlgC [Sulfurimonas denitrificans
           DSM 1251]
 gi|78497105|gb|ABB43645.1| Flagellar basal-body rod protein FlgC [Sulfurimonas denitrificans
           DSM 1251]
          Length = 164

 Score =  100 bits (249), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 46/164 (28%), Positives = 71/164 (43%), Gaps = 31/164 (18%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-- 58
           M   + S  I+  GL+ Q  R+  IS+NIANA+TT    G    R++ +      +    
Sbjct: 1   MSNFLNSFDISGYGLSAQRVRVNTISQNIANAQTTRTDEGGPYRRKEVVFKAIDFNQEFN 60

Query: 59  -----------------------------GGVRVKKIGVDQSTFVEEFDPGHPVANASGI 89
                                          V V KI  D     +++DP HP A+A+G 
Sbjct: 61  KALNGMTESAKYEDPLDEGDFGKRVNPAIMSVVVDKISRDDKEPQKKYDPAHPDADANGY 120

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           V YPN+N ++E AD+ E  R Y AN+   + S  +  + + LL+
Sbjct: 121 VAYPNINPVIEMADLVEATRSYQANVAAFESSKSIANSAISLLQ 164


>gi|251772446|gb|EES53013.1| flagellar basal-body rod protein FlgC [Leptospirillum
           ferrodiazotrophum]
          Length = 145

 Score =  100 bits (249), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 37/143 (25%), Positives = 59/143 (41%), Gaps = 13/143 (9%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
                +  I+ SGL  +  R+ +++ N+ANA  T   P     RR  I        S   
Sbjct: 1   MGFSDAMRISASGLEAERVRLNVLAGNLANADATRGNPNGTYERRDVIFAAVAPGRSFSD 60

Query: 62  -------------RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                        RV  +  D    V  +DP +P A+  G V +PNV+ L E  ++ + +
Sbjct: 61  ILNSPQESPVKEVRVLGMVRDPRPLVRVYDPNNPDADRDGYVMHPNVSKLEEMTNLIDAS 120

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y ANL  +  +  M +  L +
Sbjct: 121 RAYEANLTAMDTTKRMASKDLTI 143


>gi|291558197|emb|CBL35314.1| flagellar basal-body rod protein FlgC [Eubacterium siraeum V10Sc8a]
          Length = 160

 Score =  100 bits (249), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 43/160 (26%), Positives = 67/160 (41%), Gaps = 27/160 (16%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE-------- 53
              ++S +IA SG+A +  R+ +IS+N+ANA+TT    G+   R+  +  E         
Sbjct: 1   MAFLSSLNIAASGMAAERLRLDVISQNVANAKTTRTEDGTPYRRQVVLFSENKGFNSVLE 60

Query: 54  -------------------VMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPN 94
                                  + GV V +I  D++     +DP HP A+ +G    PN
Sbjct: 61  ETIAKRKEKIAGGVPANTVSATKNKGVLVTEIVEDETPLTPVYDPTHPDADENGYYYLPN 120

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
           V+V  E  D     R Y ANL  +     M  T L +  +
Sbjct: 121 VDVAEEQMDAMAATRSYEANLAVLNAVKSMAQTALSIGNN 160


>gi|220913734|ref|YP_002489043.1| flagellar basal-body rod protein FlgC [Arthrobacter
           chlorophenolicus A6]
 gi|219860612|gb|ACL40954.1| flagellar basal-body rod protein FlgC [Arthrobacter
           chlorophenolicus A6]
          Length = 130

 Score =  100 bits (249), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 29/129 (22%), Positives = 54/129 (41%), Gaps = 2/129 (1%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
             +  IA + L V    +  +S+N+AN      T G     R             GV V+
Sbjct: 3   FDAIGIAGTALTVHRKWLDAVSDNLANMNNAARTDGEAFRAR--YIEAAEGTDGTGVYVR 60

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
                 +     + P HP+A+A G V+YP++++  +   +    R Y AN Q + ++ + 
Sbjct: 61  STPEGDAEGRMVYQPDHPLADAEGYVRYPDIDLAEQMGALIVAQRGYQANAQVVDRARET 120

Query: 125 MTTTLDLLR 133
               L++ +
Sbjct: 121 YLAALEIGK 129


>gi|219681697|ref|YP_002468083.1| flagellar basal-body rod protein FlgC [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
 gi|257471393|ref|ZP_05635392.1| flagellar basal-body rod protein FlgC [Buchnera aphidicola str.
           LSR1 (Acyrthosiphon pisum)]
 gi|219624540|gb|ACL30695.1| flagellar basal-body rod protein FlgC [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
          Length = 136

 Score =  100 bits (249), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 40/134 (29%), Positives = 64/134 (47%), Gaps = 4/134 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGS-DPYRRKTISF---EEVMHG 57
             L+   +IA S +  QS ++ +I+ N+AN  +T    G   PY  K + F         
Sbjct: 1   MSLLNIFNIAGSAMIAQSQKLNVIASNLANMDSTIYKNGKFYPYIAKQVVFSLDTSKNSK 60

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
            GGV++  I  D S     +DP +P+AN  G +   NVN + E  +     R Y AN++ 
Sbjct: 61  IGGVKISAIIDDPSPMKLIYDPNNPMANNKGYILASNVNPITEMVNNIAAARSYQANIEV 120

Query: 118 IKQSHDMMTTTLDL 131
           +K +  M+  TL +
Sbjct: 121 LKTAKSMIMKTLTI 134


>gi|212637783|ref|YP_002314308.1| flagellar basal-body rod protein FlgC [Shewanella piezotolerans
           WP3]
 gi|212559267|gb|ACJ31721.1| Flagellar basal-body rod protein FlgC [Shewanella piezotolerans
           WP3]
          Length = 139

 Score =  100 bits (249), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 32/137 (23%), Positives = 55/137 (40%), Gaps = 6/137 (4%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
                   IA +G+  Q+ R+  ++ N+ANA    ++P       K +          G 
Sbjct: 1   MSFSEIYQIAGAGMNAQTIRLNTVASNLANAGAAAESPDQAFRALKPVFSTIYKQTQEGQ 60

Query: 62  ------RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
                  V  I    +     ++P HP A+  G V Y NVN + E ADM   +R +  ++
Sbjct: 61  VAGAHVEVSAIVETDAPLDLRYEPDHPFADEQGYVAYSNVNTVEEMADMMAASRSFETSV 120

Query: 116 QTIKQSHDMMTTTLDLL 132
           + + ++  M    L L 
Sbjct: 121 EVMNRARSMQQGLLQLG 137


>gi|51894141|ref|YP_076832.1| flagella basal body rod protein [Symbiobacterium thermophilum IAM
           14863]
 gi|51857830|dbj|BAD41988.1| flagella basal body rod protein [Symbiobacterium thermophilum IAM
           14863]
          Length = 147

 Score =  100 bits (249), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 46/147 (31%), Positives = 67/147 (45%), Gaps = 15/147 (10%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-- 59
             +  +   + S L  +  RM +I+ N+AN RTT    G    RR  +  E     +   
Sbjct: 1   MRMFQAMEASASALTAERLRMDVIANNLANYRTTRTAEGGPYRRRTVVVEERPNTFASEL 60

Query: 60  ------------GVRVKKIGVDQSTFVEEFDPGHPVANA-SGIVKYPNVNVLVETADMRE 106
                       GVRV +I  D S F E  DP HP A+  +GIV+ PNV++L E  D+  
Sbjct: 61  ARQAGRPAEPGLGVRVTQIVEDPSPFKEVHDPTHPDADPVTGIVRLPNVDLLQEITDLML 120

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
             R+Y ANL     + +M    L++ R
Sbjct: 121 AQRMYDANLTAFNAAKNMALRALEIGR 147


>gi|218887374|ref|YP_002436695.1| flagellar basal-body rod protein FlgC [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|218758328|gb|ACL09227.1| flagellar basal-body rod protein FlgC [Desulfovibrio vulgaris str.
           'Miyazaki F']
          Length = 145

 Score =  100 bits (249), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 46/146 (31%), Positives = 66/146 (45%), Gaps = 14/146 (9%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-- 58
           MD++  +  I  S L  +   M IIS N+AN +TT    G    R+ TI   + +     
Sbjct: 1   MDFMT-AIDIGASALNAERTNMNIISMNLANVKTTRTEQGGPYRRKTTIMAAQDIDDPFA 59

Query: 59  -----------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                       GVRV  +  D       ++PGHP A+  G V YP++NV+ E A +   
Sbjct: 60  KHMQGALDRELKGVRVMHVATDSRPLKRVYEPGHPDADQDGFVAYPDINVVEEMASLMTA 119

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y AN+ TI     M T  L++ R
Sbjct: 120 QRGYEANVTTIDTVKAMYTKALEISR 145


>gi|15616944|ref|NP_240157.1| flagellar basal-body rod protein FlgC [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|219682252|ref|YP_002468636.1| flagellar basal-body rod protein FlgC [Buchnera aphidicola str.
           Tuc7 (Acyrthosiphon pisum)]
 gi|11386805|sp|P57420|FLGC_BUCAI RecName: Full=Flagellar basal-body rod protein flgC
 gi|25298910|pir||C84969 flagellar basal-body rod protein flgC [imported] - Buchnera sp.
           (strain APS)
 gi|10039009|dbj|BAB13043.1| flagellar basal-body rod protein flgC [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|219621985|gb|ACL30141.1| flagellar basal-body rod protein FlgC [Buchnera aphidicola str.
           Tuc7 (Acyrthosiphon pisum)]
 gi|311086076|gb|ADP66158.1| flagellar basal-body rod protein FlgC [Buchnera aphidicola str.
           LL01 (Acyrthosiphon pisum)]
 gi|311086647|gb|ADP66728.1| flagellar basal-body rod protein FlgC [Buchnera aphidicola str.
           TLW03 (Acyrthosiphon pisum)]
 gi|311087233|gb|ADP67313.1| flagellar basal-body rod protein FlgC [Buchnera aphidicola str.
           JF99 (Acyrthosiphon pisum)]
 gi|311087752|gb|ADP67831.1| flagellar basal-body rod protein FlgC [Buchnera aphidicola str.
           JF98 (Acyrthosiphon pisum)]
          Length = 136

 Score =  100 bits (249), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 40/134 (29%), Positives = 64/134 (47%), Gaps = 4/134 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGS-DPYRRKTISF---EEVMHG 57
             L+   +IA S +  QS ++ +I+ N+AN  +T    G   PY  K + F         
Sbjct: 1   MSLLNIFNIAGSAMIAQSQKLNVIASNLANMDSTIYKNGKFYPYIAKQVVFSLDTAKNSK 60

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
            GGV++  I  D S     +DP +P+AN  G +   NVN + E  +     R Y AN++ 
Sbjct: 61  IGGVKISAIIDDPSPMKLIYDPNNPMANNKGYILASNVNPITEMVNNIAAARSYQANIEV 120

Query: 118 IKQSHDMMTTTLDL 131
           +K +  M+  TL +
Sbjct: 121 LKTAKSMIMKTLTI 134


>gi|157692298|ref|YP_001486760.1| flagellar basal body rod protein FlgC [Bacillus pumilus SAFR-032]
 gi|157681056|gb|ABV62200.1| flagellar basal body rod protein [Bacillus pumilus SAFR-032]
          Length = 150

 Score =  100 bits (249), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 42/150 (28%), Positives = 69/150 (46%), Gaps = 18/150 (12%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTP---GSDPYRRK----------- 47
             + +  + + S L  Q  RM ++S N+AN  TT         +PYRRK           
Sbjct: 1   MSIFSGVNASASALTAQRLRMDVVSSNLANMDTTRAKQVDGNWEPYRRKLVTLQPSGESF 60

Query: 48  ----TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETAD 103
                 S         GV+  KI  D++ F  ++DP +P AN +G V+ PNV+ L E  D
Sbjct: 61  SSILNSSMNSSGKLGNGVKATKITEDETPFNLQYDPTNPDANENGYVQTPNVDPLKEMVD 120

Query: 104 MRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  ++R Y AN+  +  +  M+   L++ +
Sbjct: 121 LISSSRSYEANVTALNANKSMLMKALEIGK 150


>gi|299534789|ref|ZP_07048119.1| flagellar basal body rod protein FlgC [Lysinibacillus fusiformis
           ZC1]
 gi|298729877|gb|EFI70422.1| flagellar basal body rod protein FlgC [Lysinibacillus fusiformis
           ZC1]
          Length = 153

 Score =  100 bits (249), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 45/153 (29%), Positives = 66/153 (43%), Gaps = 21/153 (13%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGD---TPGSDPYRRKTISFEEVMHG- 57
             +    +   S L  Q  RM +IS N+AN  TT         +PYRRK+++        
Sbjct: 1   MSIFHGMNTTASALTAQRLRMDVISSNMANMDTTRARQVNGEWEPYRRKSVTLSAQEGQF 60

Query: 58  ----------------SGGVRVKKIGVDQ-STFVEEFDPGHPVANASGIVKYPNVNVLVE 100
                             GV++ +I  DQ + F   +DP HP ANA G V  PNV+ L E
Sbjct: 61  SNFLNVALGKNAKSGVGNGVKITRISEDQETPFKLVYDPTHPDANADGYVNMPNVDPLKE 120

Query: 101 TADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             D+    R Y AN+     +  M+T  L++ +
Sbjct: 121 MVDLMSATRSYEANITVFNANKSMLTKALEIGK 153


>gi|148261124|ref|YP_001235251.1| flagellar basal body rod protein FlgC [Acidiphilium cryptum JF-5]
 gi|326404525|ref|YP_004284607.1| flagellar basal-body rod protein FlgC [Acidiphilium multivorum
           AIU301]
 gi|146402805|gb|ABQ31332.1| flagellar basal-body rod protein FlgC [Acidiphilium cryptum JF-5]
 gi|325051387|dbj|BAJ81725.1| flagellar basal-body rod protein FlgC [Acidiphilium multivorum
           AIU301]
          Length = 134

 Score =  100 bits (249), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 62/129 (48%), Positives = 85/129 (65%), Gaps = 3/129 (2%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV---R 62
            +  I  +GL+ Q AR+Q+I++N+ANA +TG TPGS+PY+RKTISF++V   + G    +
Sbjct: 5   TTLDITAAGLSAQDARLQVIAQNLANADSTGSTPGSNPYQRKTISFQDVFSQTTGTDLVQ 64

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
           V  IG D + F  ++DP +P ANA G VK PNVN LVE  DM++  R Y ANL  +  + 
Sbjct: 65  VANIGKDTAPFPMKYDPSNPAANAQGYVKLPNVNSLVELMDMQQAERSYDANLSVMNATR 124

Query: 123 DMMTTTLDL 131
            MMT TL L
Sbjct: 125 GMMTRTLGL 133


>gi|308273186|emb|CBX29789.1| Flagellar basal-body rod protein flgC [uncultured Desulfobacterium
           sp.]
          Length = 140

 Score =  100 bits (248), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 45/140 (32%), Positives = 67/140 (47%), Gaps = 8/140 (5%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-- 59
              + S  I++SGL  Q  RM II+EN++N  TT    G    R+      E +      
Sbjct: 1   MNFMESLKISSSGLYAQRKRMDIIAENLSNIETTRTEKGGPYRRKMIAIGSEPIDSFDEV 60

Query: 60  ------GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
                 GVRV  I  D+S F   ++P HP A+  G +  PNV++ VE A+M      + A
Sbjct: 61  LDSQLEGVRVDAIVEDESPFRIVYNPSHPDADKDGCLSKPNVDLAVEMANMLMARNAFSA 120

Query: 114 NLQTIKQSHDMMTTTLDLLR 133
           NL  IK +  M+   L++ +
Sbjct: 121 NLSAIKSTRQMVLKALEIGK 140


>gi|90411003|ref|ZP_01219017.1| flagellar basal body rod protein [Photobacterium profundum 3TCK]
 gi|90328216|gb|EAS44527.1| flagellar basal body rod protein [Photobacterium profundum 3TCK]
          Length = 138

 Score =  100 bits (248), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 39/138 (28%), Positives = 63/138 (45%), Gaps = 6/138 (4%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             L    ++  S ++ +S R+   S N+ANA +   +       R  I    +   S   
Sbjct: 1   MSLFNVFNVTGSAMSAESVRLNTTSSNLANANSVSSSAEETYKARHPIFAAALNSASYQR 60

Query: 62  ------RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
                 +VK I   Q     E++P HP+AN  G +  PNVNV+ E A+M   +R Y +N+
Sbjct: 61  AESVPVQVKGIVESQKPLRAEYNPQHPLANDEGYIYKPNVNVMEEMANMISASRSYQSNV 120

Query: 116 QTIKQSHDMMTTTLDLLR 133
           Q    S  M+ +TL + +
Sbjct: 121 QVADASKQMLMSTLQMGK 138


>gi|167750732|ref|ZP_02422859.1| hypothetical protein EUBSIR_01710 [Eubacterium siraeum DSM 15702]
 gi|167656411|gb|EDS00541.1| hypothetical protein EUBSIR_01710 [Eubacterium siraeum DSM 15702]
 gi|291532066|emb|CBK97651.1| flagellar basal-body rod protein FlgC [Eubacterium siraeum 70/3]
          Length = 160

 Score =  100 bits (248), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 43/160 (26%), Positives = 67/160 (41%), Gaps = 27/160 (16%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE-------- 53
              ++S +IA SG+A +  R+ +IS+N+ANA+TT    G+   R+  +  E         
Sbjct: 1   MAFLSSLNIAASGMAAERLRLDVISQNVANAKTTRTEDGTPYRRQVVLFSENKGFNSVLE 60

Query: 54  -------------------VMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPN 94
                                  + GV V +I  D++     +DP HP A+ +G    PN
Sbjct: 61  ETIAKRKEKIAGGVPANTVSATKNKGVLVTEIVEDETPLTPVYDPTHPDADENGYYYLPN 120

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
           V+V  E  D     R Y ANL  +     M  T L +  +
Sbjct: 121 VDVAEEEMDAMAATRSYEANLAVLNAVKSMAQTALSIGNN 160


>gi|148976392|ref|ZP_01813098.1| flagellar basal-body rod protein C [Vibrionales bacterium SWAT-3]
 gi|145964215|gb|EDK29471.1| flagellar basal-body rod protein C [Vibrionales bacterium SWAT-3]
          Length = 137

 Score =  100 bits (248), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 36/137 (26%), Positives = 60/137 (43%), Gaps = 5/137 (3%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-----H 56
             L    ++  S ++ +S R+   S N+ANA +   +       R  +   E+       
Sbjct: 1   MSLFNVFNVTGSAMSAESVRLNTTSSNLANADSVSSSAKETYKARHAVFGAELNRARNSD 60

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
            +  V+V  I         E++P HP+AN  G +   NVNV+ E A+M   +R Y  N+Q
Sbjct: 61  HTVPVKVLGIVESDKPLSAEYNPDHPLANNEGFIYKSNVNVMEEMANMISASRAYQTNVQ 120

Query: 117 TIKQSHDMMTTTLDLLR 133
               S  M+  TL + +
Sbjct: 121 VADSSKQMLLRTLQMGQ 137


>gi|167626153|ref|YP_001676447.1| flagellar basal-body rod protein FlgC [Shewanella halifaxensis
           HAW-EB4]
 gi|167356175|gb|ABZ78788.1| flagellar basal-body rod protein FlgC [Shewanella halifaxensis
           HAW-EB4]
          Length = 139

 Score =  100 bits (248), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 33/137 (24%), Positives = 55/137 (40%), Gaps = 6/137 (4%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
                   IA +G+  Q+ R+  ++ N+ANA    ++P       K +          G 
Sbjct: 1   MSFAEIYQIAGAGMNAQTIRLNTVASNLANAGAAAESPDEAFRALKPVFSTIYKQTQEGQ 60

Query: 62  ------RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
                  V  I    +     ++P HP A+  G V Y NVN + E ADM   +R +  N+
Sbjct: 61  VAGAHVEVSAIVQSDAPLDLRYEPDHPYADEQGYVAYSNVNTVEEMADMMAASRSFETNV 120

Query: 116 QTIKQSHDMMTTTLDLL 132
           + + ++  M    L L 
Sbjct: 121 EIMNRARSMQQGLLQLG 137


>gi|221636059|ref|YP_002523935.1| flagellar basal-body rod protein FlgC [Thermomicrobium roseum DSM
           5159]
 gi|221158060|gb|ACM07178.1| flagellar basal-body rod protein FlgC [Thermomicrobium roseum DSM
           5159]
          Length = 151

 Score =  100 bits (248), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 41/150 (27%), Positives = 66/150 (44%), Gaps = 18/150 (12%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG---- 57
             ++ +  ++ S L  Q  RM + + N+AN  TT    G    RR+ +   E        
Sbjct: 1   MGILETMRVSLSALTAQRVRMDVTASNLANVDTTRTPQGGPYLRRQVVFATEQPSPFARL 60

Query: 58  --------------SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETAD 103
                           GV+V  I VD+    E +DP HP A+A+GIV+YP+++V+ E  +
Sbjct: 61  VQTRTGLVETTPSAGRGVQVAGIVVDRRAVREVYDPTHPDADANGIVRYPDIDVVSEMTN 120

Query: 104 MRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +    R Y AN+  +     M    L + R
Sbjct: 121 LMAATRAYEANVTVLDALKTMAMRALSIGR 150


>gi|85858815|ref|YP_461017.1| flagellar basal-body rod protein [Syntrophus aciditrophicus SB]
 gi|85721906|gb|ABC76849.1| flagellar basal-body rod protein [Syntrophus aciditrophicus SB]
          Length = 143

 Score =  100 bits (248), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 50/145 (34%), Positives = 71/145 (48%), Gaps = 14/145 (9%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM----- 55
           MD+L  S  I +SG A Q A+M +I+ N+AN  TT  TP   PY+RK   F         
Sbjct: 1   MDFLT-SFRICSSGFAAQRAKMDVIASNLANVSTT-STPEGGPYKRKVAIFSSENVKQKF 58

Query: 56  -------HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                       V +K++  D  T  + +DP HP A+  G V  PNVNV++E  DM   +
Sbjct: 59  RFGDRLRDAIREVALKEVVEDGETVRKVYDPSHPDADQQGNVAMPNVNVMMEMTDMITAS 118

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R Y A +     + +M   TLD+ +
Sbjct: 119 RAYEACVTAFDATKNMALKTLDIGK 143


>gi|54308095|ref|YP_129115.1| flagellar basal body rod protein FlgC [Photobacterium profundum
           SS9]
 gi|46912521|emb|CAG19313.1| Putative flagellar basal body rod protein FlgC [Photobacterium
           profundum SS9]
          Length = 138

 Score =  100 bits (248), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 39/138 (28%), Positives = 63/138 (45%), Gaps = 6/138 (4%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             L    ++  S ++ +S R+   S N+ANA +   +       R  I    +   S   
Sbjct: 1   MSLFNVFNVTGSAMSAESVRLNTTSSNLANANSVSSSAEETYRARHPIFAAALNSASYQR 60

Query: 62  ------RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
                 +VK I   Q     E++P HP+AN  G +  PNVNV+ E A+M   +R Y +N+
Sbjct: 61  AESVPVQVKGIVESQKPLRAEYNPQHPLANDEGYIYKPNVNVMEEMANMISASRSYQSNV 120

Query: 116 QTIKQSHDMMTTTLDLLR 133
           Q    S  M+ +TL + +
Sbjct: 121 QVADASKQMLMSTLQMGK 138


>gi|301168115|emb|CBW27701.1| flagellar basal-body rod protein [Bacteriovorax marinus SJ]
          Length = 146

 Score =  100 bits (248), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 44/146 (30%), Positives = 70/146 (47%), Gaps = 13/146 (8%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG---- 57
             L+ S  I++SGLA    RM  IS NIANA+TT    G    R++ +   E        
Sbjct: 1   MDLLTSLKISSSGLAANKKRMASISSNIANAQTTRTAEGGPYRRKEVVFGSEPARETFSE 60

Query: 58  ---------SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                    +  V+  ++       + +++P HP AN  G V YP++NV+ E A+M   +
Sbjct: 61  ILEGELGEKAQTVQATEVISTNRPPILKYEPNHPDANDQGYVAYPDINVMEEMANMISAS 120

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLRD 134
           R Y AN+  +  + +M    L+L R+
Sbjct: 121 RAYEANINAMNTTKNMAMKALELGRN 146


>gi|170748652|ref|YP_001754912.1| flagellar basal body rod protein FlgC [Methylobacterium
           radiotolerans JCM 2831]
 gi|170655174|gb|ACB24229.1| flagellar basal-body rod protein FlgC [Methylobacterium
           radiotolerans JCM 2831]
          Length = 135

 Score =  100 bits (248), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 54/135 (40%), Positives = 78/135 (57%), Gaps = 3/135 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
                S  +A +GL  QS RM+II+ENIANA +   + G+ PYRRK  +F   +    G 
Sbjct: 1   MEFTKSLAVAAAGLKAQSGRMRIIAENIANADSAPASAGAQPYRRKIPTFTSHLDDETGA 60

Query: 62  R---VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
           R     ++  D S F  +++PG+P A+A G+V+ PNVN L+E  D+RE  R Y ANL  I
Sbjct: 61  RLVEAGRVKRDPSAFRTKYEPGNPAADAQGVVQMPNVNALIENMDLREAQRSYEANLNMI 120

Query: 119 KQSHDMMTTTLDLLR 133
             +  M+  TL +L+
Sbjct: 121 SATRKMLAQTLGILK 135


>gi|146281769|ref|YP_001171922.1| flagellar basal body rod protein FlgC [Pseudomonas stutzeri A1501]
 gi|145569974|gb|ABP79080.1| flagellar basal-body rod protein FlgC [Pseudomonas stutzeri A1501]
          Length = 134

 Score =  100 bits (248), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 40/134 (29%), Positives = 58/134 (43%), Gaps = 15/134 (11%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG--------------- 59
           ++ QS R+  IS NIANA T   +       R  +         G               
Sbjct: 1   MSAQSTRLNTISSNIANAETVSSSVDQTYRARHPVFATVFQQAGGQPNESLFAGQDQAGA 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GV+V  +  DQ      ++P HP A+ SG V YPNVNV+ E ADM   +R +  N + + 
Sbjct: 61  GVQVLGVVEDQGELQARYEPNHPAADESGYVYYPNVNVVEEMADMISASRAFQTNAELMN 120

Query: 120 QSHDMMTTTLDLLR 133
            +  M+   L L +
Sbjct: 121 TAKTMLQKVLTLGQ 134


>gi|242278628|ref|YP_002990757.1| flagellar basal-body rod protein FlgC [Desulfovibrio salexigens DSM
           2638]
 gi|242121522|gb|ACS79218.1| flagellar basal-body rod protein FlgC [Desulfovibrio salexigens DSM
           2638]
          Length = 147

 Score =  100 bits (248), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 41/144 (28%), Positives = 64/144 (44%), Gaps = 13/144 (9%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS----------- 50
                +  I  SGL  Q   + ++S N+ANA+TT    G    R+               
Sbjct: 1   MNFFTALDIGASGLKAQREYLNVVSMNMANAKTTRTAEGGPYRRKSVSMESSPVLSPFET 60

Query: 51  --FEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
              +++     GV V+ I  D   F E ++P HP A+  GIV+YP++NV+ E  +M   +
Sbjct: 61  AMNQQLNQQLRGVTVRGIVSDTRPFKEVYEPNHPDADKKGIVRYPDINVVEEMVNMITIS 120

Query: 109 RLYMANLQTIKQSHDMMTTTLDLL 132
           R Y AN Q +  +  M    L + 
Sbjct: 121 RSYEANAQAVDSAKRMFNRALRIG 144


>gi|325921022|ref|ZP_08182904.1| flagellar basal-body rod protein FlgC [Xanthomonas gardneri ATCC
           19865]
 gi|325548504|gb|EGD19476.1| flagellar basal-body rod protein FlgC [Xanthomonas gardneri ATCC
           19865]
          Length = 135

 Score =   99 bits (247), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 34/136 (25%), Positives = 63/136 (46%), Gaps = 4/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-- 58
           M  L     +A S L  QS R+  I+ N+ANA +   +  +     + I           
Sbjct: 1   MSNL-PIFDVAGSALHAQSVRLSTIASNLANADSVAGSAEATYKPIEPIFQARQNRQDPS 59

Query: 59  -GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
              V VK+I    +  +  ++PGHP+A+A G V  P+V+ + +  +M   +R Y A ++ 
Sbjct: 60  LTSVNVKEITTTNAPPIRRYEPGHPLADADGYVFSPDVDPVAQMVNMISASRNYQAGVEM 119

Query: 118 IKQSHDMMTTTLDLLR 133
           +  + ++   T+ + R
Sbjct: 120 LNTAKELALATITMGR 135


>gi|289670504|ref|ZP_06491579.1| flagellar basal body rod protein FlgC [Xanthomonas campestris pv.
           musacearum NCPPB4381]
          Length = 135

 Score =   99 bits (247), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 4/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-- 58
           M  L     +A S L   S R+  I+ N+ANA +   +  +     + I   +       
Sbjct: 1   MSNL-PIFDVAGSALHAHSVRLSTIASNLANADSVAGSAEATYKPIEPIFQAQQSRRDPS 59

Query: 59  -GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
              V VK+I    +  +  ++PGHP+A+A G V  P+V+ + +  +M  T+R Y A ++ 
Sbjct: 60  LTSVNVKEITTTNAPPIRRYEPGHPLADAEGYVFSPDVDPVSQMVNMISTSRNYQAGVEM 119

Query: 118 IKQSHDMMTTTLDLLR 133
           +  + ++   TL + R
Sbjct: 120 LNTAKELALATLTMGR 135


>gi|194015045|ref|ZP_03053662.1| flagellar basal-body rod protein FlgC [Bacillus pumilus ATCC 7061]
 gi|194014071|gb|EDW23636.1| flagellar basal-body rod protein FlgC [Bacillus pumilus ATCC 7061]
          Length = 150

 Score =   99 bits (247), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 41/150 (27%), Positives = 70/150 (46%), Gaps = 18/150 (12%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTP---GSDPYRRKTIS-------- 50
             + +  + + S L  Q  RM ++S N+AN  TT         +PYRRK ++        
Sbjct: 1   MSIFSGVNASASALTAQRLRMDVVSSNLANMDTTRAKQVDGNWEPYRRKLVTLQPSGESF 60

Query: 51  -------FEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETAD 103
                           GV+  KI  D++ F  ++DP +P AN +G V+ PNV+ L E  D
Sbjct: 61  SSILNSNMNSSGKLGNGVKATKITEDETPFNLQYDPTNPDANENGYVQTPNVDPLKEMVD 120

Query: 104 MRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  ++R Y AN+  +  +  M+   L++ +
Sbjct: 121 LISSSRSYEANVTALNANKSMLMKALEIGK 150


>gi|163789652|ref|ZP_02184090.1| Flagellar basal body rod protein FlgC [Carnobacterium sp. AT7]
 gi|159875184|gb|EDP69250.1| Flagellar basal body rod protein FlgC [Carnobacterium sp. AT7]
          Length = 145

 Score =   99 bits (247), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 48/142 (33%), Positives = 69/142 (48%), Gaps = 12/142 (8%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG---- 57
             +  S  I  SGL+++  ++  IS NIAN  TT    G  PY +K + FEE +      
Sbjct: 1   MSIFDSMQINASGLSLERLKLDTISTNIANVNTTRTEDGEGPYLKKEVVFEESLKQVETS 60

Query: 58  --------SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNR 109
                   S GV+  +I  +    V E+DP HP AN  G V+  NVN+  E  DM  T R
Sbjct: 61  LNGQGTEKSFGVKPTEIRENTDDIVMEYDPTHPDANEEGYVQQSNVNMADEMIDMMTTLR 120

Query: 110 LYMANLQTIKQSHDMMTTTLDL 131
            Y AN+  +  S +M++  L +
Sbjct: 121 TYDANVTAMNASKEMLSKALQI 142


>gi|152997584|ref|YP_001342419.1| flagellar basal-body rod protein FlgC [Marinomonas sp. MWYL1]
 gi|150838508|gb|ABR72484.1| flagellar basal-body rod protein FlgC [Marinomonas sp. MWYL1]
          Length = 151

 Score =   99 bits (247), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 37/149 (24%), Positives = 62/149 (41%), Gaps = 16/149 (10%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-- 59
             L     I+ S ++ Q+ R+  I+ N+AN  +   +       RK +  + +       
Sbjct: 3   MSLSNIFTISGSAMSAQTIRLNTIASNMANVDSAASSADQTYRARKPVFSQMMNDSMREY 62

Query: 60  --------------GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
                         GV+V  I    +     ++P HP+AN  G V YPNVN + E ADM 
Sbjct: 63  GWNNANKDDTGAGVGVKVDGIVESDAPLQPRYEPDHPMANEDGYVFYPNVNPMEEMADMM 122

Query: 106 ETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
             +R +  N++ +  +  MM   L L + 
Sbjct: 123 SASRSFQTNVEIMNSAKSMMQKMLTLGQS 151


>gi|86153269|ref|ZP_01071473.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
           jejuni HB93-13]
 gi|121612733|ref|YP_001000227.1| flagellar basal body rod protein FlgC [Campylobacter jejuni subsp.
           jejuni 81-176]
 gi|167005182|ref|ZP_02270940.1| flagellar basal body rod protein FlgC [Campylobacter jejuni subsp.
           jejuni 81-176]
 gi|85842995|gb|EAQ60206.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
           jejuni HB93-13]
 gi|87250029|gb|EAQ72987.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
           jejuni 81-176]
          Length = 164

 Score =   99 bits (247), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 55/164 (33%), Positives = 70/164 (42%), Gaps = 32/164 (19%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRK------------- 47
           M YL     I+  GL+ Q  RM +IS NIANA TT    G    RR+             
Sbjct: 1   MAYLSD-FDISGYGLSAQRFRMNVISSNIANANTTRTAEGGPYRRREVIFKATDFDKLLN 59

Query: 48  ------------------TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGI 89
                               S EE       V V K+  D   F  ++DP HP ANA G 
Sbjct: 60  EQINKDNNFLKYENPLNDPSSPEEAKPPIQSVVVDKVVRDDKDFRMKYDPSHPDANAEGY 119

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           V YPNVN ++E AD+ E  R Y AN+     +  +  + +DLLR
Sbjct: 120 VAYPNVNPVIEMADLIEATRAYQANVSAFTSAKTIAQSAIDLLR 163


>gi|299068730|emb|CBJ39969.1| FlgC: Flagellar basal-body rod protein [Ralstonia solanacearum
           CMR15]
          Length = 129

 Score =   99 bits (247), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 37/129 (28%), Positives = 63/129 (48%), Gaps = 3/129 (2%)

Query: 8   AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS--FEEVMHGSGGVRVKK 65
             +A S L  QS RM +++ N+ANA +     G+    ++ +    +E    + GV V +
Sbjct: 1   MDVAGSALTAQSKRMNVVASNLANAESVTGPDGTAYRAKQVVFSPEQETDGYATGVSVDR 60

Query: 66  IGVDQ-STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           +  D  +       PG+P+A+A G V  PNV+V+ E  +M   +R Y AN++    +  M
Sbjct: 61  VVEDTVTPMKRMHQPGNPLADADGYVTMPNVDVVDEMVNMISASRSYQANVEVANTTKTM 120

Query: 125 MTTTLDLLR 133
               L L +
Sbjct: 121 AAKALTLGQ 129


>gi|291484170|dbj|BAI85245.1| flagellar basal body rod protein FlgC [Bacillus subtilis subsp.
           natto BEST195]
          Length = 150

 Score =   99 bits (247), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 46/147 (31%), Positives = 68/147 (46%), Gaps = 18/147 (12%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGD---TPGSDPYRRKTISFEE-------- 53
             S +++ S L  Q  RM ++S N+AN  TT          PYRRK +S +         
Sbjct: 4   FHSLNVSASALTAQRVRMDVVSSNLANMDTTRAKQVNGEWVPYRRKMVSLQSKGESFSSI 63

Query: 54  -------VMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
                    +   GV+V KI  D S F   +DP  P ANA G V+ PNV+ L E  D+  
Sbjct: 64  LNSQMSGSGNAGNGVKVSKITEDDSDFNLVYDPTDPDANADGYVQKPNVDPLKEMVDLVS 123

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
           + R Y AN+  +  +  M+   L++ +
Sbjct: 124 STRSYEANVTAMNATKGMLMKALEIGK 150


>gi|310816827|ref|YP_003964791.1| flagellar basal-body rod protein FlgC [Ketogulonicigenium vulgare
           Y25]
 gi|308755562|gb|ADO43491.1| flagellar basal-body rod protein FlgC [Ketogulonicigenium vulgare
           Y25]
          Length = 127

 Score =   99 bits (247), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 54/133 (40%), Positives = 73/133 (54%), Gaps = 7/133 (5%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M     +  IA SG+  Q++RM+  SENIANA T G       Y RK +SF       G 
Sbjct: 1   MADFSTTLSIAASGMQAQASRMRFTSENIANADTPG-------YHRKLVSFRAAHANDGT 53

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V   ++ +D++   E +DP HP+AN  G     NV++L+E AD RE +R Y ANL+   Q
Sbjct: 54  VEASRVRLDRAPLAEIYDPAHPLANDQGNYSGSNVDLLIEIADAREASRSYEANLKVFDQ 113

Query: 121 SHDMMTTTLDLLR 133
              M T+ LDLLR
Sbjct: 114 VRQMSTSLLDLLR 126


>gi|238796902|ref|ZP_04640406.1| Flagellar basal-body rod protein flgC [Yersinia mollaretii ATCC
           43969]
 gi|238719162|gb|EEQ10974.1| Flagellar basal-body rod protein flgC [Yersinia mollaretii ATCC
           43969]
          Length = 121

 Score =   99 bits (247), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 36/121 (29%), Positives = 59/121 (48%), Gaps = 2/121 (1%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM--HGSGGVRVKKIGVDQST 72
           +A QS R+ + + N+ANA +     G     R+ I   +       GGVRV  +      
Sbjct: 1   MAAQSKRLNVSASNMANADSIAGPDGQPYRARQVIFQVDSAPGQEIGGVRVGDVVESTEP 60

Query: 73  FVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
               ++P +P+A+  G V+ PNVNV+ E  +    +R Y AN++ +  +  MM  TL L 
Sbjct: 61  DRMVYEPANPLADDKGYVRMPNVNVVSEMVNTISASRSYQANVEVMNTAKSMMLKTLTLG 120

Query: 133 R 133
           +
Sbjct: 121 Q 121


>gi|188592115|ref|YP_001796713.1| flgc: flagellar basal-body rod protein [Cupriavidus taiwanensis LMG
           19424]
 gi|170938489|emb|CAP63476.1| FlgC: Flagellar basal-body rod protein [Cupriavidus taiwanensis LMG
           19424]
          Length = 122

 Score =   99 bits (247), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 39/122 (31%), Positives = 62/122 (50%), Gaps = 3/122 (2%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS---GGVRVKKIGVDQS 71
           +A QS RM + + N+ANA +     G     ++ +       G    GGV+V+ +  D S
Sbjct: 1   MAAQSQRMNVTASNLANADSVVSPDGQAYRAKQVVFGMAPTPGQTDIGGVQVQGVSEDPS 60

Query: 72  TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
                 +P HP+ANA G V  PNVN + E  +M   +R Y AN++ +  + +MM  TL +
Sbjct: 61  PPRMVHNPTHPMANAQGYVVMPNVNPVEEMVNMISASRSYQANVEVLNTAKNMMLKTLTI 120

Query: 132 LR 133
            +
Sbjct: 121 GQ 122


>gi|149912830|ref|ZP_01901364.1| flagellar basal-body rod protein FlgC [Roseobacter sp. AzwK-3b]
 gi|149813236|gb|EDM73062.1| flagellar basal-body rod protein FlgC [Roseobacter sp. AzwK-3b]
          Length = 130

 Score =   99 bits (247), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 44/133 (33%), Positives = 70/133 (52%), Gaps = 4/133 (3%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M     S  ++ SGL  Q+ R++ +SENIANA T G    +  +  +      V H   G
Sbjct: 1   MSGFSESLSVSASGLKAQAQRLRHVSENIANADTPGYRRKTVSFEARAAGMSGVHHVETG 60

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
               ++ +D+S     ++P HP+A+ +G     NV +++E AD RE  R Y ANL+   Q
Sbjct: 61  ----RVRLDRSDLARVYEPSHPMADETGHFDSSNVQLVIEIADAREAQRSYEANLKMFDQ 116

Query: 121 SHDMMTTTLDLLR 133
           +  M ++ +DLLR
Sbjct: 117 ARQMSSSLMDLLR 129


>gi|296274007|ref|YP_003656638.1| flagellar basal-body rod protein FlgC [Arcobacter nitrofigilis DSM
           7299]
 gi|296098181|gb|ADG94131.1| flagellar basal-body rod protein FlgC [Arcobacter nitrofigilis DSM
           7299]
          Length = 153

 Score =   99 bits (247), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 47/153 (30%), Positives = 75/153 (49%), Gaps = 20/153 (13%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--- 58
                  +IA+SG++ Q  R+ ++S NIANA+TT  T G    ++  +  E ++  +   
Sbjct: 1   MGFFDGYNIASSGMSAQRTRINVVSANIANAKTTHSTDGGPYKKQNVVFQEMLLSENEKL 60

Query: 59  -----------------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVET 101
                             GV +K+I   +   + +F+P HP ANA G V YPN+N ++E 
Sbjct: 61  KANDNQDKQSTLPSKNLSGVGIKQIVESKDKPIMKFEPDHPDANADGYVAYPNINPVIEM 120

Query: 102 ADMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
            D+ E  R Y AN+     +  + T TL+LLR 
Sbjct: 121 VDLIEAMRSYEANVSAFTTTKTIDTKTLELLRS 153


>gi|307720251|ref|YP_003891391.1| flagellar basal-body rod protein FlgC [Sulfurimonas autotrophica
           DSM 16294]
 gi|306978344|gb|ADN08379.1| flagellar basal-body rod protein FlgC [Sulfurimonas autotrophica
           DSM 16294]
          Length = 164

 Score =   99 bits (247), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 47/164 (28%), Positives = 72/164 (43%), Gaps = 31/164 (18%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG--- 57
           M   + S  I+  GL+ Q  R+  IS NIANA+TT    G    RR+ +      +    
Sbjct: 1   MSNFLNSFDISGYGLSAQRVRVNTISSNIANAQTTRTDEGGPYRRREVVFKAINFNDVYN 60

Query: 58  ----------------------------SGGVRVKKIGVDQSTFVEEFDPGHPVANASGI 89
                                          V V K+  D S  + +F+P +P A+A+G 
Sbjct: 61  KALGENTQSAKYEDPLNEGEFGKKVNPAIMSVVVDKVIRDDSKPLMKFEPNNPDADANGY 120

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           V YPN+N +VE +D+ E  R Y AN+   + + DM  + + LL+
Sbjct: 121 VAYPNINPVVEMSDLVEATRSYQANVAAFQSAKDMANSAISLLQ 164


>gi|16078682|ref|NP_389501.1| flagellar basal body rod protein FlgC [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221309494|ref|ZP_03591341.1| flagellar basal body rod protein FlgC [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221313819|ref|ZP_03595624.1| flagellar basal body rod protein FlgC [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221318743|ref|ZP_03600037.1| flagellar basal body rod protein FlgC [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221323014|ref|ZP_03604308.1| flagellar basal body rod protein FlgC [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|321315385|ref|YP_004207672.1| flagellar basal body rod protein FlgC [Bacillus subtilis BSn5]
 gi|120294|sp|P24501|FLGC_BACSU RecName: Full=Flagellar basal-body rod protein flgC
 gi|142916|gb|AAA22442.1| flgC [Bacillus subtilis]
 gi|2633991|emb|CAB13492.1| flagellar component of cell-proximal portion of basal-body rod
           [Bacillus subtilis subsp. subtilis str. 168]
 gi|320021659|gb|ADV96645.1| flagellar basal body rod protein FlgC [Bacillus subtilis BSn5]
          Length = 150

 Score =   99 bits (247), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 46/147 (31%), Positives = 68/147 (46%), Gaps = 18/147 (12%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGD---TPGSDPYRRKTISFEE-------- 53
             S +++ S L  Q  RM ++S N+AN  TT          PYRRK +S +         
Sbjct: 4   FHSLNVSASALTAQRVRMDVVSSNLANMDTTRAKQVNGEWVPYRRKMVSLQSKGESFSSI 63

Query: 54  -------VMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
                    +   GV+V KI  D S F   +DP  P ANA G V+ PNV+ L E  D+  
Sbjct: 64  LNSQMSGSGNAGNGVKVSKITEDDSDFNLVYDPTDPDANAEGYVQKPNVDPLKEMVDLVS 123

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
           + R Y AN+  +  +  M+   L++ +
Sbjct: 124 STRSYEANVTAMNATKGMLMKALEIGK 150


>gi|296135675|ref|YP_003642917.1| flagellar basal-body rod protein FlgC [Thiomonas intermedia K12]
 gi|294339845|emb|CAZ88208.1| Flagellar basal-body rod protein flgC (Putative proximal rod
           protein) [Thiomonas sp. 3As]
 gi|295795797|gb|ADG30587.1| flagellar basal-body rod protein FlgC [Thiomonas intermedia K12]
          Length = 138

 Score =   99 bits (247), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 36/123 (29%), Positives = 63/123 (51%), Gaps = 6/123 (4%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-- 59
             L ++  +ANSGL  +S R+ +++ N+ANA +   + G     R+ +   + + G G  
Sbjct: 1   MSLFSALDVANSGLTAESYRLNVVASNLANANSAVSSNGQPYRAREVVFAAQPLSGPGVP 60

Query: 60  ----GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
               GV+V  +          ++PG+P+AN  G V YPNVN + E  +M   +R Y A++
Sbjct: 61  AGVNGVQVAGVVEKPGPLKLVYEPGNPLANKDGYVSYPNVNPVDEMVNMISASRAYQADV 120

Query: 116 QTI 118
             +
Sbjct: 121 NVM 123


>gi|254511648|ref|ZP_05123715.1| flagellar basal-body rod protein FlgC [Rhodobacteraceae bacterium
           KLH11]
 gi|221535359|gb|EEE38347.1| flagellar basal-body rod protein FlgC [Rhodobacteraceae bacterium
           KLH11]
          Length = 128

 Score =   99 bits (247), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 45/133 (33%), Positives = 72/133 (54%), Gaps = 6/133 (4%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M     S   + S L  Q+AR++ +SENI+NA T G        R+          G+  
Sbjct: 1   MSDFSHSLTASASALRAQAARLRHVSENISNADTPG------YRRKTVPFETVKRGGAEL 54

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V+V  + +D+    + +DPGHP+A+ +G  +  NV++++E AD RE  R Y ANL+   Q
Sbjct: 55  VQVGHVKLDRRDPGQIYDPGHPMADEAGYYRGSNVDLMIEIADAREAQRSYEANLKMFDQ 114

Query: 121 SHDMMTTTLDLLR 133
           +  M ++ +DLLR
Sbjct: 115 TRQMSSSLMDLLR 127


>gi|220904841|ref|YP_002480153.1| flagellar basal-body rod protein FlgC [Desulfovibrio desulfuricans
           subsp. desulfuricans str. ATCC 27774]
 gi|219869140|gb|ACL49475.1| flagellar basal-body rod protein FlgC [Desulfovibrio desulfuricans
           subsp. desulfuricans str. ATCC 27774]
          Length = 145

 Score =   99 bits (247), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 45/146 (30%), Positives = 70/146 (47%), Gaps = 14/146 (9%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-- 58
           MD++  +  I+ SGLA    R+  IS N+ANA+TT    G    RR  +     +     
Sbjct: 1   MDFMT-AFDISASGLAADRTRINTISMNLANAKTTRTPLGGPYRRRSVVQQTADVDDPFS 59

Query: 59  -----------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                       GVRV  + +D   F   ++PG+P ANA G V YP++NV+ E A++   
Sbjct: 60  VHMRSALDRAVKGVRVMAVTMDNRPFKRVYEPGNPDANAEGYVMYPDINVVEEMANLMTA 119

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R + AN+ T+     M    L++ +
Sbjct: 120 QRNFEANVTTVDAIKGMYVKALEIGK 145


>gi|160880851|ref|YP_001559819.1| flagellar basal-body rod protein FlgC [Clostridium phytofermentans
           ISDg]
 gi|160429517|gb|ABX43080.1| flagellar basal-body rod protein FlgC [Clostridium phytofermentans
           ISDg]
          Length = 150

 Score = 99.6 bits (246), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 40/150 (26%), Positives = 66/150 (44%), Gaps = 18/150 (12%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR--------------- 46
             +    +I+ SG++ Q  RM IIS+NIAN  TT D  G+   R+               
Sbjct: 1   MSIFNGMNISASGMSAQRLRMDIISQNIANVETTRDENGNPYRRKTVVFSERESGSFGTV 60

Query: 47  --KTISFEEVMHGSGGVRVKKIGVDQ-STFVEEFDPGHPVANASGIVKYPNVNVLVETAD 103
             +  + +       GV+V  I  D  +     ++P HP A+  G V  PNVN + E  +
Sbjct: 61  LAQKAASKASDTQGNGVKVTAIVEDHVTAMKRVYNPSHPDADQDGYVTMPNVNTVTEMTN 120

Query: 104 MRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +    R Y AN+     + +M+   L++ +
Sbjct: 121 LISATRSYEANVTAFNATKNMLLKGLEVGK 150


>gi|328958286|ref|YP_004375672.1| flagellar basal body rod protein FlgC [Carnobacterium sp. 17-4]
 gi|328674610|gb|AEB30656.1| flagellar basal body rod protein FlgC [Carnobacterium sp. 17-4]
          Length = 145

 Score = 99.6 bits (246), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 49/142 (34%), Positives = 69/142 (48%), Gaps = 12/142 (8%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG---- 57
             +  S  I  SGL+++  ++  IS NIAN  TT    G  PY +K + FEE        
Sbjct: 1   MSIFDSMQINASGLSLERLKLDTISTNIANVNTTRTEDGEGPYLKKEVVFEESFKQVETS 60

Query: 58  --------SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNR 109
                   S GV+  +I  +    V E++P HP AN  G V+ PNVN+  E  DM  T R
Sbjct: 61  LAGQGTEKSFGVKPTEIRENTEDIVMEYNPTHPDANEEGYVQMPNVNMADEMIDMMTTLR 120

Query: 110 LYMANLQTIKQSHDMMTTTLDL 131
            Y AN+  +  S +M+T  L +
Sbjct: 121 TYDANVTAMNASKEMLTKALQI 142


>gi|54297180|ref|YP_123549.1| flagellar basal body rod protein FlgC [Legionella pneumophila str.
           Paris]
 gi|53750965|emb|CAH12376.1| Flagellar basal-body rod protein FlgC [Legionella pneumophila str.
           Paris]
          Length = 140

 Score = 99.6 bits (246), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 30/139 (21%), Positives = 58/139 (41%), Gaps = 8/139 (5%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--- 58
             L A   IA S +  ++ R+   + N++NA     +P      +  +      + +   
Sbjct: 1   MSLNAIFDIAASAMTAETVRLTTSAGNMSNANVEAGSPDEVYQAKYPVFKSVQENANQWI 60

Query: 59  -----GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
                 GV++  I    +     +DP  P+A+  G V   N+N + E A++   +R Y  
Sbjct: 61  GEQIKAGVKLDGIYQSDAEPHRRYDPNSPIADKDGFVYTSNINYVEEMANIISASRSYQM 120

Query: 114 NLQTIKQSHDMMTTTLDLL 132
           N++ +  +  +M  TL L 
Sbjct: 121 NIELLNTTKQLMQRTLQLG 139


>gi|322432998|ref|YP_004210247.1| flagellar basal-body rod protein FlgC [Acidobacterium sp. MP5ACTX9]
 gi|321165225|gb|ADW70929.1| flagellar basal-body rod protein FlgC [Acidobacterium sp. MP5ACTX9]
          Length = 148

 Score = 99.6 bits (246), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 37/145 (25%), Positives = 64/145 (44%), Gaps = 15/145 (10%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH-------- 56
                I+ S L+ +  R ++I+ N+ANA TT    G    R++ +               
Sbjct: 4   FDMLQISGSALSAERQRSEVIAANMANAETTHTDTGGPFKRKEVVFSSASDSSFHLTFAK 63

Query: 57  -------GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNR 109
                    G VR+ +I  D +  V  ++PGHP A+  G V YP +N + E  D+  + R
Sbjct: 64  TGGLSGKTPGTVRISQIVDDTAAPVMRYEPGHPDADKDGFVAYPAINPVQEMVDLMGSTR 123

Query: 110 LYMANLQTIKQSHDMMTTTLDLLRD 134
            Y  N   +  +  M+  ++D+L+ 
Sbjct: 124 AYQLNASAVSAAKQMIQQSIDILKS 148


>gi|149203129|ref|ZP_01880100.1| flagellar basal-body rod protein FlgC [Roseovarius sp. TM1035]
 gi|149143675|gb|EDM31711.1| flagellar basal-body rod protein FlgC [Roseovarius sp. TM1035]
          Length = 130

 Score = 99.6 bits (246), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 45/133 (33%), Positives = 68/133 (51%), Gaps = 4/133 (3%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M     +  ++ SGL  Q+ R+Q +SENIANA T G    +  +             +G 
Sbjct: 1   MSDFSNALSVSASGLKAQAQRLQHVSENIANADTPGYRRKTVSFEAT----HAGTGTAGA 56

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V V ++ +DQS     +DP HP+A+ +G  +   V++++E AD RE  R Y ANL+   Q
Sbjct: 57  VTVSRVHLDQSAPQRIYDPSHPLADETGHYQGSTVDLMIEIADAREAQRSYEANLKMFDQ 116

Query: 121 SHDMMTTTLDLLR 133
              M    +DLLR
Sbjct: 117 VRQMSAGLMDLLR 129


>gi|157959904|ref|YP_001499938.1| flagellar basal-body rod protein FlgC [Shewanella pealeana ATCC
           700345]
 gi|157844904|gb|ABV85403.1| flagellar basal-body rod protein FlgC [Shewanella pealeana ATCC
           700345]
          Length = 139

 Score = 99.6 bits (246), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 32/137 (23%), Positives = 55/137 (40%), Gaps = 6/137 (4%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
                   IA +G+  Q+ R+  ++ N+ANA    ++P       K +          G 
Sbjct: 1   MSFAEIYQIAGAGMNAQTIRLNTVASNLANAGAAAESPDQAFRALKPVFSTIYKQTQEGE 60

Query: 62  ------RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
                  V  I    +     ++P HP A+  G V Y NVN + E ADM   +R +  ++
Sbjct: 61  LAGAHVEVSAIVQSDAPLDLRYEPNHPFADEQGYVAYSNVNTVEEMADMMAASRSFETSV 120

Query: 116 QTIKQSHDMMTTTLDLL 132
           + + ++  M    L L 
Sbjct: 121 EVMNRARSMQQGLLQLG 137


>gi|259417635|ref|ZP_05741554.1| flagellar basal-body rod protein FlgC [Silicibacter sp. TrichCH4B]
 gi|259346541|gb|EEW58355.1| flagellar basal-body rod protein FlgC [Silicibacter sp. TrichCH4B]
          Length = 130

 Score = 99.6 bits (246), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 45/133 (33%), Positives = 74/133 (55%), Gaps = 4/133 (3%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M     S  +  SGL  Q+AR+  +SENI+NA T G    +  ++       +V      
Sbjct: 1   MSDFSKSLSVTASGLRAQAARLTHVSENISNADTPGYRRKTVSFQAVRDLETDVSQ---- 56

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V+V ++ +D+S   + +DP HP+A+ +G  +  NV++++E AD RE  R Y ANL+   Q
Sbjct: 57  VKVGRVSLDRSELEQVYDPSHPLADETGHYEGSNVDLMIEIADAREAQRTYEANLKMFDQ 116

Query: 121 SHDMMTTTLDLLR 133
           +  M ++ +DLLR
Sbjct: 117 TRQMSSSLMDLLR 129


>gi|254516987|ref|ZP_05129045.1| flagellar basal-body rod protein FlgC [gamma proteobacterium
           NOR5-3]
 gi|219674492|gb|EED30860.1| flagellar basal-body rod protein FlgC [gamma proteobacterium
           NOR5-3]
          Length = 140

 Score = 99.6 bits (246), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 36/140 (25%), Positives = 62/140 (44%), Gaps = 8/140 (5%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--- 58
             L  +  +A + L  QS R+  IS N+ANA     +       +  +    +   +   
Sbjct: 1   MSLFDAIGVAATSLDAQSQRLNTISSNLANANAVSSSAEETYRAQYPVFETMLNDLTTGN 60

Query: 59  -----GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
                 GVRV  I   +   V E+ P HP+A+  G +  P +N + E A+M E +R Y  
Sbjct: 61  GADGVAGVRVTGIAQSELPAVREYVPTHPLADDEGFIYRPAINSVEEMANMMEASRSYQD 120

Query: 114 NLQTIKQSHDMMTTTLDLLR 133
           +++ +  +  ++  TL L R
Sbjct: 121 SIEAMNTAKQLILRTLTLGR 140


>gi|167770222|ref|ZP_02442275.1| hypothetical protein ANACOL_01565 [Anaerotruncus colihominis DSM
           17241]
 gi|167667544|gb|EDS11674.1| hypothetical protein ANACOL_01565 [Anaerotruncus colihominis DSM
           17241]
          Length = 145

 Score = 99.6 bits (246), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 43/144 (29%), Positives = 62/144 (43%), Gaps = 12/144 (8%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--- 58
              + S  I  S L  +  RM  I +NIAN+ TT    G    R++ +  E  +      
Sbjct: 1   MSFMKSMDIVGSALTAERFRMDTILQNIANSNTTRTPEGEPYRRKQVVFQERAIDFQSAL 60

Query: 59  ---------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNR 109
                    GGVRV ++   Q  F   +DP HP AN  G V YPNVN+  E  D+   + 
Sbjct: 61  ADASNRIERGGVRVTEVVESQRDFTPVYDPSHPDANEDGYVMYPNVNLTEERVDLMAASN 120

Query: 110 LYMANLQTIKQSHDMMTTTLDLLR 133
            Y ANL  +     +    L++ +
Sbjct: 121 AYDANLTALAVVKSLALKALEIGK 144


>gi|194365682|ref|YP_002028292.1| flagellar basal body rod protein FlgC [Stenotrophomonas maltophilia
           R551-3]
 gi|254521317|ref|ZP_05133372.1| flagellar basal-body rod protein FlgC [Stenotrophomonas sp. SKA14]
 gi|194348486|gb|ACF51609.1| flagellar basal-body rod protein FlgC [Stenotrophomonas maltophilia
           R551-3]
 gi|219718908|gb|EED37433.1| flagellar basal-body rod protein FlgC [Stenotrophomonas sp. SKA14]
          Length = 135

 Score = 99.6 bits (246), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 36/136 (26%), Positives = 68/136 (50%), Gaps = 4/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF---EEVMHG 57
           M  L     IA S L  QS RM  I+ N++NA T   +  +     + I      +    
Sbjct: 1   MSNL-PIFDIAGSALQAQSVRMSTIASNLSNADTVAGSADAVYKPLEPIFQAVTSKNDPN 59

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
              V+VK+I   ++  ++ ++PGHP+A+A G +  P+V+ + +  ++  T+R Y A ++ 
Sbjct: 60  ITSVKVKEITQSEAAPIKRYEPGHPLADADGYIYQPDVDPVAQMVNLISTSRNYQAGVEM 119

Query: 118 IKQSHDMMTTTLDLLR 133
           +  + ++   TL + R
Sbjct: 120 LTTAKELALATLTMGR 135


>gi|34497157|ref|NP_901372.1| flagellar basal-body rod protein flgC [Chromobacterium violaceum
           ATCC 12472]
 gi|34103014|gb|AAQ59377.1| flagellar basal-body rod protein flgC [Chromobacterium violaceum
           ATCC 12472]
          Length = 134

 Score = 99.6 bits (246), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 37/133 (27%), Positives = 60/133 (45%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
                 + IA S +  Q+ R+  ++ NIANA T      S    RK +   ++     GV
Sbjct: 1   MSFRDISRIAGSAMTAQTVRLNTVASNIANADTASGAEQSAYRGRKPVFSSQMQGEGMGV 60

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
           +V  +  +Q    +  +PG+P+A+A G V Y NVN + E  DM    R +  N++ + + 
Sbjct: 61  QVLDVVQNQEPVRKAHEPGNPLADADGNVFYSNVNAVEEMTDMLSATRAFQTNVEVLAKV 120

Query: 122 HDMMTTTLDLLRD 134
             M    L L   
Sbjct: 121 KTMQQDLLKLGDS 133


>gi|260438810|ref|ZP_05792626.1| flagellar basal-body rod protein FlgC [Butyrivibrio crossotus DSM
           2876]
 gi|292808799|gb|EFF68004.1| flagellar basal-body rod protein FlgC [Butyrivibrio crossotus DSM
           2876]
          Length = 145

 Score = 99.6 bits (246), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 48/144 (33%), Positives = 68/144 (47%), Gaps = 13/144 (9%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKT------------I 49
             + +  +IA SG+  Q  R  IIS NIANA TT    G    RR              +
Sbjct: 1   MAIFSGMNIAASGMTAQRLRTDIISGNIANANTTRTAEGGPYTRRNVLLTQKTSLNFGDV 60

Query: 50  SFEEVMHGSGGVRVKKIGVD-QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
             E +     GV+V  I  D ++ +   +DP HP A+ +G VKYPNVN++ E  D+ +  
Sbjct: 61  FNETLQGAGNGVKVVAITKDTETDYNLVYDPSHPDADENGYVKYPNVNIVNEMTDLIDAT 120

Query: 109 RLYMANLQTIKQSHDMMTTTLDLL 132
           R Y AN      S  M +  L+L+
Sbjct: 121 RSYEANATAFDASKSMASKGLELM 144


>gi|254485520|ref|ZP_05098725.1| flagellar basal-body rod protein FlgC [Roseobacter sp. GAI101]
 gi|214042389|gb|EEB83027.1| flagellar basal-body rod protein FlgC [Roseobacter sp. GAI101]
          Length = 130

 Score = 99.6 bits (246), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 43/133 (32%), Positives = 73/133 (54%), Gaps = 4/133 (3%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M     +  +++SGL  Q+ R++ +SENI+NA T G       ++    +   +      
Sbjct: 1   MSDFSNALDVSSSGLRAQANRLRHLSENISNADTPGYRRKLVSFQ----TAFSLGDAPAK 56

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V+  K+ +DQ+   + +DP HP+A+ +G     NVN+L+E AD +E  R Y ANL+  +Q
Sbjct: 57  VQTGKVHLDQTALEKVYDPAHPLADDTGQYDGSNVNLLIELADAKEAQRSYEANLKMFEQ 116

Query: 121 SHDMMTTTLDLLR 133
           +  M +  +DLLR
Sbjct: 117 TRKMSSGLMDLLR 129


>gi|332702980|ref|ZP_08423068.1| flagellar basal-body rod protein FlgC [Desulfovibrio africanus str.
           Walvis Bay]
 gi|332553129|gb|EGJ50173.1| flagellar basal-body rod protein FlgC [Desulfovibrio africanus str.
           Walvis Bay]
          Length = 147

 Score = 99.6 bits (246), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 41/147 (27%), Positives = 67/147 (45%), Gaps = 14/147 (9%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS---------- 50
           MD++  +  +A SGL  +  ++ IIS N+AN  TT    G    R+  +           
Sbjct: 1   MDFMT-ALDVAASGLTAKRTQLNIISSNLANINTTRTAEGGPYRRKTVVFQTTGTRSPFD 59

Query: 51  ---FEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
               + +     GV++  I  D   F    DPGHP A+  G V++P++NV+ E A M   
Sbjct: 60  SAMMDAMERELKGVKISHITKDNRPFKIVNDPGHPDADEFGNVRFPDINVVEEMAHMITA 119

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLRD 134
            R Y AN  +++    M +  L + + 
Sbjct: 120 MRSYEANAASVESIKSMFSKALQIGQS 146


>gi|260431752|ref|ZP_05785723.1| flagellar basal-body rod protein FlgC [Silicibacter
           lacuscaerulensis ITI-1157]
 gi|260415580|gb|EEX08839.1| flagellar basal-body rod protein FlgC [Silicibacter
           lacuscaerulensis ITI-1157]
          Length = 128

 Score = 99.2 bits (245), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 46/133 (34%), Positives = 72/133 (54%), Gaps = 6/133 (4%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M     S  +  S L  Q+AR++ +SENI+NA T G        R+          G+  
Sbjct: 1   MGDFSKSLEVTASALRAQAARLRHVSENISNADTPG------YRRKTVPFEAVHKDGADL 54

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V+  ++ +DQS     +DPGHP+A+ SG  +  NV++++E AD RE  R Y ANL+   Q
Sbjct: 55  VQAGRVRLDQSKLSRIYDPGHPLADESGHYQGSNVDLMIEIADAREAQRSYEANLKMFDQ 114

Query: 121 SHDMMTTTLDLLR 133
           +  M ++ ++LLR
Sbjct: 115 ARQMSSSLMELLR 127


>gi|284989558|ref|YP_003408112.1| hypothetical protein Gobs_0980 [Geodermatophilus obscurus DSM
           43160]
 gi|284062803|gb|ADB73741.1| protein of unknown function DUF1078 domain protein
           [Geodermatophilus obscurus DSM 43160]
          Length = 134

 Score = 99.2 bits (245), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 35/130 (26%), Positives = 58/130 (44%), Gaps = 1/130 (0%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRK-TISFEEVMHGSGGVRV 63
             S  I+ SGL V    +  +S+NIAN      T       R       +   G GGVRV
Sbjct: 4   FDSLGISGSGLLVHRKWLDAVSDNIANINNVTSTDQDAFQERLIVAQAVDYGSGEGGVRV 63

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
            +     +      +P HP+A+A+G V+YP++++  +   +    R Y ANL  ++++  
Sbjct: 64  ARAEYGSAEGRMVHEPDHPLADANGYVRYPDIDLGDQMTQLIMAQRGYQANLAVVERATT 123

Query: 124 MMTTTLDLLR 133
                L L +
Sbjct: 124 AYQAALQLGK 133


>gi|182412250|ref|YP_001817316.1| flagellar basal-body rod protein FlgC [Opitutus terrae PB90-1]
 gi|177839464|gb|ACB73716.1| flagellar basal-body rod protein FlgC [Opitutus terrae PB90-1]
          Length = 139

 Score = 99.2 bits (245), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 47/140 (33%), Positives = 72/140 (51%), Gaps = 9/140 (6%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG- 60
             LI+   I    L  Q  R+ ++++NIANA+TT  TP   PY+R+ +SFE  +    G 
Sbjct: 1   MNLISGIDITAGALNAQKTRLDMVAQNIANAQTTR-TPNGGPYQRQVVSFETELVRREGL 59

Query: 61  -------VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
                  V+V  +  D+S   + F+P HP A   G+V  PNVN+  E  D+   +R Y A
Sbjct: 60  SGPALQSVKVANVTADRSPGQQVFNPQHPDAGPDGLVTMPNVNLSYEMVDLITASRAYEA 119

Query: 114 NLQTIKQSHDMMTTTLDLLR 133
           NL  ++ +  M   TL + +
Sbjct: 120 NLAVVRNARQMAVKTLQIGK 139


>gi|56695104|ref|YP_165451.1| flagellar basal body rod protein FlgC [Ruegeria pomeroyi DSS-3]
 gi|56676841|gb|AAV93507.1| flagellar basal-body rod protein FlgC [Ruegeria pomeroyi DSS-3]
          Length = 135

 Score = 99.2 bits (245), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 42/133 (31%), Positives = 71/133 (53%), Gaps = 4/133 (3%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M     S  +  S L  Q+ R++ +SENI+NA T G    + P+  +    + V   + G
Sbjct: 6   MSEFSKSLSVTASALRAQATRLRHVSENISNADTPGYRRKTVPFEVERGRDDGVERVTTG 65

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
               ++ +D+    + FDP HP+A+ +G  +  NV++++E AD RE  R Y ANL+   Q
Sbjct: 66  ----RVKLDRRQLPDIFDPSHPLADETGHYQGSNVDLMIEIADAREAQRSYEANLKLFDQ 121

Query: 121 SHDMMTTTLDLLR 133
           +  M  + ++LLR
Sbjct: 122 ARQMSASLMELLR 134


>gi|300024608|ref|YP_003757219.1| flagellar basal-body rod protein FlgC [Hyphomicrobium denitrificans
           ATCC 51888]
 gi|299526429|gb|ADJ24898.1| flagellar basal-body rod protein FlgC [Hyphomicrobium denitrificans
           ATCC 51888]
          Length = 139

 Score = 99.2 bits (245), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 73/136 (53%), Positives = 99/136 (72%), Gaps = 3/136 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
           D LIAS   A SGL  QS+RM+++SENIANA TTG TPG+DPY+RKTISF+ VM  + G 
Sbjct: 3   DPLIASTRSAASGLFAQSSRMRVVSENIANASTTGKTPGADPYQRKTISFQSVMDENAGA 62

Query: 62  ---RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
              +V KI  D++ F  ++ PG+  A+++G+VK PNVN+LVE ADMRE +R Y AN Q I
Sbjct: 63  DLVQVDKISHDETPFETQYMPGNAAADSNGMVKMPNVNMLVELADMREASRSYTANTQVI 122

Query: 119 KQSHDMMTTTLDLLRD 134
           KQ  ++++ T+DL+R 
Sbjct: 123 KQVRELVSMTIDLMRS 138


>gi|329901228|ref|ZP_08272753.1| Flagellar basal-body rod protein FlgC [Oxalobacteraceae bacterium
           IMCC9480]
 gi|327549160|gb|EGF33752.1| Flagellar basal-body rod protein FlgC [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 122

 Score = 99.2 bits (245), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 35/122 (28%), Positives = 64/122 (52%), Gaps = 3/122 (2%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH---GSGGVRVKKIGVDQS 71
           ++ Q+ R+ +++ NIANA +T  T G     ++ +     +     + GV+V K+  D +
Sbjct: 1   MSAQAQRLNVVASNIANADSTTSTNGQVYKAKQVVFSAVPVGGDAAASGVKVDKVLEDTA 60

Query: 72  TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
                +DP HP A+  G V  PNVNV+ E  +M   +R Y  N++T+  +  ++  TL +
Sbjct: 61  APRLVYDPKHPQADEKGYVSMPNVNVVEEMVNMISASRSYQTNVETMNAAKTLLLKTLTI 120

Query: 132 LR 133
            +
Sbjct: 121 GQ 122


>gi|297584033|ref|YP_003699813.1| flagellar basal-body rod protein FlgC [Bacillus selenitireducens
           MLS10]
 gi|297142490|gb|ADH99247.1| flagellar basal-body rod protein FlgC [Bacillus selenitireducens
           MLS10]
          Length = 142

 Score = 99.2 bits (245), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 43/141 (30%), Positives = 64/141 (45%), Gaps = 21/141 (14%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGD---TPGSDPYRRKTISFEEVMHGSG- 59
           +    +++ SGL  Q  RM ++S N+ANA +T         +PYRRK ++FE        
Sbjct: 1   MFHGMNVSASGLTSQRLRMDVVSSNMANAESTRGRFVDGEWEPYRRKMVTFEPNRTSGSR 60

Query: 60  -----------------GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETA 102
                            GV+V +I  D+S F   +DP HP AN  G V+ PNV+ L E  
Sbjct: 61  FQDHFRHAVNRNATTGDGVKVGEIIEDESPFRMRYDPDHPDANEDGYVELPNVDPLKEMI 120

Query: 103 DMRETNRLYMANLQTIKQSHD 123
           D+    R Y A + +     +
Sbjct: 121 DLMSATRSYEAGVTSFDAHKN 141


>gi|90579907|ref|ZP_01235715.1| flagellar basal body rod protein [Vibrio angustum S14]
 gi|90438792|gb|EAS63975.1| flagellar basal body rod protein [Vibrio angustum S14]
          Length = 138

 Score = 99.2 bits (245), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 38/138 (27%), Positives = 60/138 (43%), Gaps = 6/138 (4%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             L    ++  S ++ +S R+   S N+ANA +   +       R  I    +   S   
Sbjct: 1   MSLFNVFNVTGSAMSAESVRLNTTSSNLANANSVSSSAEETYKARHPIFAAALNSASYHQ 60

Query: 62  ------RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
                 +VK I         E++P HP+AN  G +  PNVNV+ E A+M   +R Y  N+
Sbjct: 61  SSSVPVQVKGIVESDKPLSAEYNPEHPMANVEGFIYKPNVNVMEEMANMISASRSYQNNV 120

Query: 116 QTIKQSHDMMTTTLDLLR 133
           Q    S  M+  TL + +
Sbjct: 121 QVADASKQMLMKTLQMGK 138


>gi|330445346|ref|ZP_08308998.1| flagellar basal-body rod protein FlgC [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
 gi|328489537|dbj|GAA03495.1| flagellar basal-body rod protein FlgC [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
          Length = 138

 Score = 99.2 bits (245), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 39/138 (28%), Positives = 62/138 (44%), Gaps = 6/138 (4%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             L    ++  S ++ +S R+   S N+ANA +   +       R  I    +   S   
Sbjct: 1   MSLFNVFNVTGSAMSAESVRLNTTSSNLANANSVSSSAEETYKARHPIFAAALESASYNR 60

Query: 62  ------RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
                 +VK I   +     E++P HP+ANA G +  PNVNV+ E A+M   +R Y  N+
Sbjct: 61  EDSVPVQVKGIVESERPLTAEYNPDHPMANAQGFIYKPNVNVMEEMANMISASRSYQNNV 120

Query: 116 QTIKQSHDMMTTTLDLLR 133
           Q    S  M+  TL + +
Sbjct: 121 QVADASKQMLMKTLQMGK 138


>gi|254458686|ref|ZP_05072110.1| flagellar basal-body rod protein FlgC [Campylobacterales bacterium
           GD 1]
 gi|207084452|gb|EDZ61740.1| flagellar basal-body rod protein FlgC [Campylobacterales bacterium
           GD 1]
          Length = 163

 Score = 99.2 bits (245), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 48/163 (29%), Positives = 72/163 (44%), Gaps = 31/163 (19%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--- 58
              ++S  I+  GL+ Q  R+  IS+NIANA+TT    G    R++ +      +     
Sbjct: 1   MSFLSSFDISGYGLSAQRVRVNTISQNIANAQTTRTEEGGPYRRKEVVFKAIDFNEQFNK 60

Query: 59  ----------------------------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
                                         V V KI  D S    +FDP HP A+A+G V
Sbjct: 61  AIGKMTDSAKFEDPLNEGDFGKKVNPAIMSVIVDKISRDDSEPKMKFDPSHPDADANGYV 120

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            YPN+N ++E AD+ E  R Y AN+   + S +M  + + LL+
Sbjct: 121 AYPNINPVIEMADLVEATRSYQANVAAFESSKNMANSAISLLQ 163


>gi|57238273|ref|YP_178646.1| flagellar basal body rod protein FlgC [Campylobacter jejuni RM1221]
 gi|57167077|gb|AAW35856.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni RM1221]
 gi|315057945|gb|ADT72274.1| Flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
           jejuni S3]
          Length = 164

 Score = 99.2 bits (245), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 55/164 (33%), Positives = 70/164 (42%), Gaps = 32/164 (19%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRK------------- 47
           M YL     I+  GL+ Q  RM +IS NIANA TT    G    RR+             
Sbjct: 1   MAYLSD-FDISGYGLSAQRFRMNVISSNIANANTTRTAEGGPYRRREVIFKATDFDKLLN 59

Query: 48  ------------------TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGI 89
                               S EE       V V K+  D   F  ++DP HP ANA G 
Sbjct: 60  ERINKDNNFLKYENPLNDPSSPEEAKPAIQSVVVDKVVRDDKDFRMKYDPSHPDANAEGY 119

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           V YPNVN ++E AD+ E  R Y AN+     +  +  + +DLLR
Sbjct: 120 VAYPNVNPVIEMADLIEATRAYQANVSAFTSAKTIAQSAIDLLR 163


>gi|99082804|ref|YP_614958.1| flagellar basal body rod protein FlgC [Ruegeria sp. TM1040]
 gi|99039084|gb|ABF65696.1| Flagellar basal-body rod protein flgC [Ruegeria sp. TM1040]
          Length = 130

 Score = 99.2 bits (245), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 45/133 (33%), Positives = 74/133 (55%), Gaps = 4/133 (3%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M     S  +  SGL  Q+AR+  +SENI+NA T G    +  ++       +V      
Sbjct: 1   MSDFSKSLSVTASGLRAQAARLTHVSENISNADTPGYRRKTVSFQSVRDLETDVSQ---- 56

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           VRV ++ +D++   + +DP HP+A+ +G  +  NV++++E AD RE  R Y ANL+   Q
Sbjct: 57  VRVGRVSLDRTELEQVYDPSHPLADETGHYEGSNVDLMIEIADAREAQRTYEANLKMFDQ 116

Query: 121 SHDMMTTTLDLLR 133
           +  M ++ +DLLR
Sbjct: 117 TRQMSSSLMDLLR 129


>gi|189426355|ref|YP_001953532.1| flagellar basal-body rod protein FlgC [Geobacter lovleyi SZ]
 gi|189422614|gb|ACD97012.1| flagellar basal-body rod protein FlgC [Geobacter lovleyi SZ]
          Length = 145

 Score = 98.8 bits (244), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 43/145 (29%), Positives = 67/145 (46%), Gaps = 13/145 (8%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             L  + + ++S L  +  RM +IS N+AN  TT    G    R+  +        + G 
Sbjct: 1   MDLFTAMNTSSSALTAERTRMNLISSNLANVNTTRTPEGGPYKRKDAVFAATAPVDAFGK 60

Query: 62  -------------RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                         V +I  D+S    ++DP HP AN  G V  PNVNV+ E ADM    
Sbjct: 61  ALGGAADRHVREVNVVEIVEDKSAPRMQYDPAHPDANPQGYVALPNVNVVEEMADMITAT 120

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R+Y AN+ + + + +M   TL++ +
Sbjct: 121 RVYEANVMSAQAAKNMALKTLEISK 145


>gi|319944137|ref|ZP_08018415.1| flagellar basal-body rod protein FlgC [Lautropia mirabilis ATCC
           51599]
 gi|319742631|gb|EFV95040.1| flagellar basal-body rod protein FlgC [Lautropia mirabilis ATCC
           51599]
          Length = 149

 Score = 98.8 bits (244), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 41/149 (27%), Positives = 67/149 (44%), Gaps = 16/149 (10%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV------ 54
           M  L+    +A S L+ QS R+  ++ N+ANA T     GS    R+ +    +      
Sbjct: 1   MSSLMNILPLAGSALSAQSQRLNTVASNLANADTVAGPDGSVYKARQVVFKPAMVEARQA 60

Query: 55  ----------MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
                        S GVRV  +  D +   + +DP +P ANA G V + NVNV+ E  +M
Sbjct: 61  AGARQWSTRGASASMGVRVVDVIEDPTPGKQTYDPKNPAANAEGYVMHSNVNVIEEMVNM 120

Query: 105 RETNRLYMANLQTIKQSHDMMTTTLDLLR 133
              +R Y  N++ +  +  +   TL + +
Sbjct: 121 ISASRSYQNNVEMMNTAQQLALKTLSIGQ 149


>gi|56460254|ref|YP_155535.1| flagellar basal body rod protein [Idiomarina loihiensis L2TR]
 gi|56179264|gb|AAV81986.1| Flagellar basal body rod protein [Idiomarina loihiensis L2TR]
          Length = 150

 Score = 98.8 bits (244), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 38/149 (25%), Positives = 60/149 (40%), Gaps = 17/149 (11%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-- 59
             L    ++  S ++ QS R+   + N+ANA +   +       R  +    +   SG  
Sbjct: 1   MSLFNIFNVTGSAMSAQSVRLNTTASNLANANSISSSIDETYRARNPVFATALADASGNY 60

Query: 60  ---------------GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
                          GV+V  I   Q     E+ P HP+A+ SG +  PNVN + E A+M
Sbjct: 61  KGNSLTNQTQAGQEAGVKVMGIVESQDPLQIEYAPNHPMADESGYIYRPNVNTMEEMANM 120

Query: 105 RETNRLYMANLQTIKQSHDMMTTTLDLLR 133
              +R Y  N+Q    +  M    L L +
Sbjct: 121 ISASRSYQTNVQVADTAKTMTQRLLRLGQ 149


>gi|323698500|ref|ZP_08110412.1| flagellar basal-body rod protein FlgC [Desulfovibrio sp. ND132]
 gi|323458432|gb|EGB14297.1| flagellar basal-body rod protein FlgC [Desulfovibrio desulfuricans
           ND132]
          Length = 145

 Score = 98.8 bits (244), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 45/145 (31%), Positives = 72/145 (49%), Gaps = 14/145 (9%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRK------------- 47
           MD++  +  I+ SGL  Q A++ +IS N+AN RTT    G    R+              
Sbjct: 1   MDFMT-ALDISASGLTAQRAQLNVISMNMANMRTTETAGGGPYQRKTVSFEATPVYSPFD 59

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
               +++     GV+V  +  D   F + ++P HP AN  G V YP++NV+ E A+M + 
Sbjct: 60  QAMQDQLNRNLEGVKVTGVLADNRPFKQVYEPNHPDANDQGYVFYPDINVVEEMANMMQA 119

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLL 132
            R Y AN+QT++   +M    L + 
Sbjct: 120 MRGYEANVQTVQAVKNMFQKALTIG 144


>gi|225159033|ref|ZP_03725343.1| flagellar basal-body rod protein FlgC [Opitutaceae bacterium TAV2]
 gi|224802412|gb|EEG20674.1| flagellar basal-body rod protein FlgC [Opitutaceae bacterium TAV2]
          Length = 140

 Score = 98.8 bits (244), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 48/140 (34%), Positives = 68/140 (48%), Gaps = 8/140 (5%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-- 59
             L++     +S L  Q  R+ II++NIANA TT    G    R+      E+ +  G  
Sbjct: 1   MNLLSGIGPTSSALNAQKTRLDIIAQNIANAHTTRGPNGLPYQRQMVSFESELTNKLGQI 60

Query: 60  ------GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
                  VRV  +  D +     +DP HP A+ASG+V  PNVN+  E  D+   +R Y A
Sbjct: 61  DGVPLRSVRVSSVSGDTTAGQRVYDPQHPDADASGMVTMPNVNLAYEMVDLITASRTYEA 120

Query: 114 NLQTIKQSHDMMTTTLDLLR 133
           NLQ +K S  M    L++ R
Sbjct: 121 NLQVVKNSRQMALKALEIGR 140


>gi|52841449|ref|YP_095248.1| flagellar basal body rod protein FlgC [Legionella pneumophila
           subsp. pneumophila str. Philadelphia 1]
 gi|54294161|ref|YP_126576.1| flagellar basal body rod protein FlgC [Legionella pneumophila str.
           Lens]
 gi|148358804|ref|YP_001250011.1| flagellar basal body rod protein FlgC [Legionella pneumophila str.
           Corby]
 gi|296106849|ref|YP_003618549.1| flagellar basal-body rod protein FlgC [Legionella pneumophila
           2300/99 Alcoy]
 gi|52628560|gb|AAU27301.1| flagellar basal body rod protein FlgC [Legionella pneumophila
           subsp. pneumophila str. Philadelphia 1]
 gi|53753993|emb|CAH15464.1| Flagellar basal-body rod protein FlgC [Legionella pneumophila str.
           Lens]
 gi|148280577|gb|ABQ54665.1| flagellar basal body rod protein FlgC [Legionella pneumophila str.
           Corby]
 gi|295648750|gb|ADG24597.1| flagellar basal-body rod protein FlgC [Legionella pneumophila
           2300/99 Alcoy]
 gi|307609975|emb|CBW99504.1| flagellar basal-body rod protein FlgC [Legionella pneumophila 130b]
          Length = 140

 Score = 98.8 bits (244), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 30/139 (21%), Positives = 58/139 (41%), Gaps = 8/139 (5%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--- 58
             L A   IA S +  ++ R+   + N++NA     +P      +  +      + +   
Sbjct: 1   MSLNAIFDIAASAMTAETVRLTTSAGNMSNANVEAGSPDEVYQAKYPVFKSVQENANQWM 60

Query: 59  -----GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
                 GV++  I    +     +DP  P+A+  G V   N+N + E A++   +R Y  
Sbjct: 61  GEQIKAGVKLDGIYESDAEPHRRYDPNSPIADKDGFVYTSNINYVEEMANIISASRSYQM 120

Query: 114 NLQTIKQSHDMMTTTLDLL 132
           N++ +  +  +M  TL L 
Sbjct: 121 NIELLNTTKQLMQRTLQLG 139


>gi|296330833|ref|ZP_06873308.1| flagellar basal body rod protein FlgC [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305674351|ref|YP_003866023.1| flagellar component of cell-proximal portion of basal-body rod
           [Bacillus subtilis subsp. spizizenii str. W23]
 gi|296151838|gb|EFG92712.1| flagellar basal body rod protein FlgC [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305412595|gb|ADM37714.1| flagellar component of cell-proximal portion of basal-body rod
           [Bacillus subtilis subsp. spizizenii str. W23]
          Length = 150

 Score = 98.8 bits (244), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 46/147 (31%), Positives = 68/147 (46%), Gaps = 18/147 (12%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGD---TPGSDPYRRKTISFEE-------- 53
             S +++ S L  Q  RM ++S N+AN  TT          PYRRK +S +         
Sbjct: 4   FHSLNVSASALTAQRVRMDVVSSNLANMDTTRAKQVNGEWMPYRRKMVSLQSKGESFSSI 63

Query: 54  -------VMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
                    +   GV+V KI  D S F   +DP  P ANA G V+ PNV+ L E  D+  
Sbjct: 64  LNSQMSGSGNAGNGVKVSKITEDDSEFNLVYDPTDPDANAEGYVQKPNVDPLKEMVDLVS 123

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
           + R Y AN+  +  +  M+   L++ +
Sbjct: 124 STRSYEANVTAMNATKGMLMKALEIGK 150


>gi|258404782|ref|YP_003197524.1| flagellar basal-body rod protein FlgC [Desulfohalobium retbaense
           DSM 5692]
 gi|257797009|gb|ACV67946.1| flagellar basal-body rod protein FlgC [Desulfohalobium retbaense
           DSM 5692]
          Length = 142

 Score = 98.8 bits (244), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 47/141 (33%), Positives = 64/141 (45%), Gaps = 10/141 (7%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE-------- 53
             L  +  I+ S +  QS RM   S N+AN  TT    G   YR+  +   +        
Sbjct: 1   MNLFTAMDISASAMTAQSLRMNAASSNLANTETTRTASGEPYYRKSVVLSPKNSFDDELA 60

Query: 54  --VMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
             +  G  GV V  I  DQ    + +DPGHP AN  G V  P++NVL E  D+    R Y
Sbjct: 61  SRLPEGVAGVEVAAIRQDQEALRDVYDPGHPDANGEGYVTMPDINVLEEMTDIMAATRAY 120

Query: 112 MANLQTIKQSHDMMTTTLDLL 132
            AN+ +IK S  M    L++ 
Sbjct: 121 EANVTSIKASQRMAVKALEIG 141


>gi|298345988|ref|YP_003718675.1| flagellar basal body rod protein [Mobiluncus curtisii ATCC 43063]
 gi|304390254|ref|ZP_07372208.1| flagellar basal-body rod protein FlgC [Mobiluncus curtisii subsp.
           curtisii ATCC 35241]
 gi|315654575|ref|ZP_07907481.1| flagellar basal-body rod protein FlgC [Mobiluncus curtisii ATCC
           51333]
 gi|315657519|ref|ZP_07910401.1| flagellar basal-body rod protein FlgC [Mobiluncus curtisii subsp.
           holmesii ATCC 35242]
 gi|298236049|gb|ADI67181.1| flagellar basal body rod protein [Mobiluncus curtisii ATCC 43063]
 gi|304326736|gb|EFL93980.1| flagellar basal-body rod protein FlgC [Mobiluncus curtisii subsp.
           curtisii ATCC 35241]
 gi|315491039|gb|EFU80658.1| flagellar basal-body rod protein FlgC [Mobiluncus curtisii ATCC
           51333]
 gi|315491991|gb|EFU81600.1| flagellar basal-body rod protein FlgC [Mobiluncus curtisii subsp.
           holmesii ATCC 35242]
          Length = 132

 Score = 98.8 bits (244), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 30/129 (23%), Positives = 52/129 (40%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
             +  IA +G+ V    +  IS+NIAN  TT          R  ++         G  V 
Sbjct: 4   FGAIGIAGTGMTVNRKWLDCISDNIANINTTKPMNEEAFRARYVVAQAVDYGRPAGTMVS 63

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
            I +  +     +DP  P AN  G V++P++++  +   +    R Y AN   + ++   
Sbjct: 64  GIALGGTDGRIVYDPRDPNANEEGYVRHPDIDLGSQMTQLIMAQRAYQANAAVVDRAKST 123

Query: 125 MTTTLDLLR 133
               L + R
Sbjct: 124 YEAALQIGR 132


>gi|332140544|ref|YP_004426282.1| flagellar basal-body rod protein FlgC [Alteromonas macleodii str.
           'Deep ecotype']
 gi|327550566|gb|AEA97284.1| flagellar basal-body rod protein FlgC [Alteromonas macleodii str.
           'Deep ecotype']
          Length = 140

 Score = 98.8 bits (244), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 32/138 (23%), Positives = 61/138 (44%), Gaps = 6/138 (4%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH----- 56
             L     I+++G+  ++ R+   + NIANA +   +       R  +    +       
Sbjct: 1   MSLFNVMQISSTGMEAENVRLNTTASNIANANSVSSSYDETYRARHPVFATALQDAMRDQ 60

Query: 57  -GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
               GV+VK I    +    E+ P +P+A+ +G +  PNVN++ E A+M   ++ Y  N+
Sbjct: 61  SKGAGVQVKGIVESDAPLQVEYSPNNPMADENGYIYKPNVNIVEEMANMMSASKAYETNV 120

Query: 116 QTIKQSHDMMTTTLDLLR 133
           Q    +  +    L L +
Sbjct: 121 QVADTTKRIFRRVLQLGQ 138


>gi|222055648|ref|YP_002538010.1| flagellar basal-body rod protein FlgC [Geobacter sp. FRC-32]
 gi|221564937|gb|ACM20909.1| flagellar basal-body rod protein FlgC [Geobacter sp. FRC-32]
          Length = 139

 Score = 98.8 bits (244), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 47/137 (34%), Positives = 64/137 (46%), Gaps = 9/137 (6%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG----- 59
           + +  I+ S L  +  RM +IS N+ANA +T    G    R+  +    +   S      
Sbjct: 1   MDAMEISASALTAERTRMNLISSNLANANSTRTDEGGQYRRKDAVFATVLDGASANMEGG 60

Query: 60  ----GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
               GV V  I  DQS    ++DPGHP A   G V YPNVN++ E ADM    R Y AN 
Sbjct: 61  TEVIGVEVVNIIEDQSPPRLQYDPGHPDAREDGYVAYPNVNIVEEMADMVTATRAYEANT 120

Query: 116 QTIKQSHDMMTTTLDLL 132
             +K   DM    L++ 
Sbjct: 121 TAMKAGMDMQMKALEIG 137


>gi|86151838|ref|ZP_01070052.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
           jejuni 260.94]
 gi|148925898|ref|ZP_01809585.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni CG8486]
 gi|157414808|ref|YP_001482064.1| flagellar basal body rod protein FlgC [Campylobacter jejuni subsp.
           jejuni 81116]
 gi|205355383|ref|ZP_03222154.1| flagellar basaL body rod protein [Campylobacter jejuni subsp.
           jejuni CG8421]
 gi|283954185|ref|ZP_06371710.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
           jejuni 414]
 gi|283955949|ref|ZP_06373439.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
           jejuni 1336]
 gi|315124050|ref|YP_004066054.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
           jejuni ICDCCJ07001]
 gi|85841467|gb|EAQ58715.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
           jejuni 260.94]
 gi|145844884|gb|EDK21988.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni CG8486]
 gi|157385772|gb|ABV52087.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni 81116]
 gi|205346617|gb|EDZ33249.1| flagellar basaL body rod protein [Campylobacter jejuni subsp.
           jejuni CG8421]
 gi|283792609|gb|EFC31388.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
           jejuni 1336]
 gi|283794464|gb|EFC33208.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
           jejuni 414]
 gi|284925790|gb|ADC28142.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
           jejuni IA3902]
 gi|315017772|gb|ADT65865.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
           jejuni ICDCCJ07001]
 gi|315931721|gb|EFV10676.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
           jejuni 327]
          Length = 164

 Score = 98.8 bits (244), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 55/164 (33%), Positives = 70/164 (42%), Gaps = 32/164 (19%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRK------------- 47
           M YL     I+  GL+ Q  RM +IS NIANA TT    G    RR+             
Sbjct: 1   MAYLSD-FDISGYGLSAQRFRMNVISSNIANANTTRTAEGGPYRRREVIFKATDFDKLLN 59

Query: 48  ------------------TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGI 89
                               S EE       V V K+  D   F  ++DP HP ANA G 
Sbjct: 60  EQINKDNNFLKYENPLNDPSSPEEAKPAIQSVVVDKVVRDDKDFRMKYDPSHPDANAEGY 119

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           V YPNVN ++E AD+ E  R Y AN+     +  +  + +DLLR
Sbjct: 120 VAYPNVNPVIEMADLIEATRAYQANVSAFTSAKTIAQSAIDLLR 163


>gi|94968682|ref|YP_590730.1| flagellar basal-body rod protein FlgC [Candidatus Koribacter
           versatilis Ellin345]
 gi|94550732|gb|ABF40656.1| flagellar basal-body rod protein FlgC [Candidatus Koribacter
           versatilis Ellin345]
          Length = 145

 Score = 98.4 bits (243), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 42/145 (28%), Positives = 66/145 (45%), Gaps = 13/145 (8%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--- 58
             L      +   +A +  R +I++ N+ANA TT    G    R++ I            
Sbjct: 1   MNLFDQIRTSGGAMAAERLRAEIVAGNMANAETTRTAEGGPYRRKQVIFSSAQPTFGMVL 60

Query: 59  ----------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                     GGVRV  I  D    V  ++PGHP ANA G+V YPN++ + ET D+    
Sbjct: 61  AKAGGEPAIGGGVRVLDIVQDSRDPVLRYEPGHPDANAEGMVAYPNIDPIEETVDLMSAL 120

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R Y  N   ++ +  M+  +L++L+
Sbjct: 121 RSYQLNASAVQAAKQMIQQSLEILK 145


>gi|88811799|ref|ZP_01127053.1| flagellar basal body rod protein [Nitrococcus mobilis Nb-231]
 gi|88791190|gb|EAR22303.1| flagellar basal body rod protein [Nitrococcus mobilis Nb-231]
          Length = 139

 Score = 98.4 bits (243), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 34/138 (24%), Positives = 62/138 (44%), Gaps = 5/138 (3%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           +  L     +A S ++ Q+ R+ I + N+ANA T   TP      R+ +    +      
Sbjct: 2   IMALFDIFDVAGSAMSAQALRLNITASNMANADTVASTPERAYKARQPVFAAALNTAHDT 61

Query: 61  V-----RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
           V     +++ +    +     + P +P+A+A G V   NVN +    +M   +R Y  N+
Sbjct: 62  VSAVPVQLRGVVTSSAAAEPLYQPNNPLADADGYVYRSNVNTVEAMVNMISASRSYQNNV 121

Query: 116 QTIKQSHDMMTTTLDLLR 133
           + +  S D++  TL L R
Sbjct: 122 EVVSTSRDLLLQTLRLGR 139


>gi|57167572|ref|ZP_00366712.1| flagellar basal-body rod protein FlgC [Campylobacter coli RM2228]
 gi|305433078|ref|ZP_07402234.1| flagellar basal-body rod protein FlgC [Campylobacter coli JV20]
 gi|57020694|gb|EAL57358.1| flagellar basal-body rod protein FlgC [Campylobacter coli RM2228]
 gi|304443779|gb|EFM36436.1| flagellar basal-body rod protein FlgC [Campylobacter coli JV20]
          Length = 164

 Score = 98.4 bits (243), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 55/164 (33%), Positives = 70/164 (42%), Gaps = 32/164 (19%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRK------------- 47
           M YL     I+  GL+ Q  RM +IS NIANA TT    G    RR+             
Sbjct: 1   MAYLSD-FDISGYGLSAQRFRMNVISSNIANANTTRTAEGGPYRRREVIFKATDFDKLLN 59

Query: 48  ------------------TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGI 89
                               S EE       V V K+  D   F  ++DP HP ANA G 
Sbjct: 60  EQINKDNNFLKYENPLNDPSSPEEAKPAIQSVVVDKVVRDDKDFRMKYDPSHPDANAQGY 119

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           V YPNVN ++E AD+ E  R Y AN+     +  +  + +DLLR
Sbjct: 120 VAYPNVNPVIEMADLIEATRAYQANVSAFTSAKTIAQSAIDLLR 163


>gi|322379367|ref|ZP_08053738.1| flagellar basal body rod protein FlgC [Helicobacter suis HS1]
 gi|322380862|ref|ZP_08054952.1| flagellar basal body rod protein FlgC [Helicobacter suis HS5]
 gi|321146713|gb|EFX41523.1| flagellar basal body rod protein FlgC [Helicobacter suis HS5]
 gi|321148185|gb|EFX42714.1| flagellar basal body rod protein FlgC [Helicobacter suis HS1]
          Length = 165

 Score = 98.4 bits (243), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 48/164 (29%), Positives = 73/164 (44%), Gaps = 31/164 (18%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF--------- 51
           M   ++S  I+  GL+ Q  R  +IS NIANA TT    G    R++ +           
Sbjct: 1   MRMFLSSFDISGYGLSAQRVRANLISSNIANANTTRTDEGGPYRRQEAVFKSFDFNKVLN 60

Query: 52  ----------------------EEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGI 89
                                 E+      GV ++KI  D    + ++DP HP A+A+G 
Sbjct: 61  EKLAKNNDLMEYEDPLDESDEIEKPNPPIMGVYIEKIVRDDKAPLLKYDPSHPDADANGY 120

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           V YPNVN +VE AD+ E  R Y AN+   + + +M    + +L+
Sbjct: 121 VSYPNVNPVVEMADLIEATRAYQANVAAFQSTKNMAANAIGMLQ 164


>gi|86149025|ref|ZP_01067257.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
           jejuni CF93-6]
 gi|88596860|ref|ZP_01100096.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
           jejuni 84-25]
 gi|218562179|ref|YP_002343958.1| flagellar basal body rod protein FlgC [Campylobacter jejuni subsp.
           jejuni NCTC 11168]
 gi|85840383|gb|EAQ57640.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
           jejuni CF93-6]
 gi|88190549|gb|EAQ94522.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
           jejuni 84-25]
 gi|112359885|emb|CAL34673.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni NCTC 11168]
 gi|315928561|gb|EFV07858.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
           jejuni 305]
          Length = 164

 Score = 98.4 bits (243), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 55/164 (33%), Positives = 70/164 (42%), Gaps = 32/164 (19%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRK------------- 47
           M YL     I+  GL+ Q  RM +IS NIANA TT    G    RR+             
Sbjct: 1   MAYLSD-FDISGYGLSAQRFRMNVISSNIANANTTRTAEGGPYRRREVIFKATDFDKLLN 59

Query: 48  ------------------TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGI 89
                               S EE       V V K+  D   F  ++DP HP ANA G 
Sbjct: 60  EQINKDNNFLKYENPLNDPSSPEEAKPAIQSVVVDKVVRDDKDFRMKYDPSHPDANAEGY 119

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           V YPNVN ++E AD+ E  R Y AN+     +  +  + +DLLR
Sbjct: 120 VAYPNVNPVIEMADLIEATRAYQANVSAFTSAKTISQSAIDLLR 163


>gi|56551509|ref|YP_162348.1| flagellar basal-body rod protein FlgC [Zymomonas mobilis subsp.
           mobilis ZM4]
 gi|260752884|ref|YP_003225777.1| flagellar basal-body rod protein FlgC [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
 gi|4378860|gb|AAD19728.1| flagellar basal-body rod protein [Zymomonas mobilis subsp. mobilis
           ZM4]
 gi|56543083|gb|AAV89237.1| flagellar basal-body rod protein FlgC [Zymomonas mobilis subsp.
           mobilis ZM4]
 gi|258552247|gb|ACV75193.1| flagellar basal-body rod protein FlgC [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
          Length = 134

 Score = 98.4 bits (243), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 34/134 (25%), Positives = 60/134 (44%), Gaps = 1/134 (0%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-G 59
           MD  ++   I+   ++ Q  R+   + N+ANA +   +  +  +  K I           
Sbjct: 1   MDRPLSIFDISGRAMSAQLVRLNTNASNLANANSVASSKEAAFHPLKPIFSTVTQSPGIA 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
            V+V K+    S   +  DP HP+A+ +G V    V+   E  +M ET R Y  N+Q ++
Sbjct: 61  TVKVDKVVATGSPPTQIHDPTHPLADENGDVWAAGVDTAQEMVEMIETARDYQNNVQVMQ 120

Query: 120 QSHDMMTTTLDLLR 133
            +  +   TL + R
Sbjct: 121 TAKSLTLDTLKMER 134


>gi|257095361|ref|YP_003169002.1| flagellar basal-body rod protein FlgC [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257047885|gb|ACV37073.1| flagellar basal-body rod protein FlgC [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 134

 Score = 98.4 bits (243), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 35/122 (28%), Positives = 60/122 (49%), Gaps = 2/122 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-- 59
             ++ +  +A S L  QS R+  ++ N+ANA +   + G     ++ +     M      
Sbjct: 1   MSILNAFQVAGSALTAQSLRLNAVASNLANADSVVGSDGKPYRAKQVVFVATPMGSPAAE 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GVRVK++  D S     +DP +P A+  G V  PNVNV+ E  +M   +R Y  N++ + 
Sbjct: 61  GVRVKQVVEDSSPGRRVYDPRNPAADDRGYVTMPNVNVVDEMTNMISASRSYQTNVEVMN 120

Query: 120 QS 121
            +
Sbjct: 121 TA 122


>gi|329849687|ref|ZP_08264533.1| flagellar basal-body rod protein FlgC [Asticcacaulis biprosthecum
           C19]
 gi|328841598|gb|EGF91168.1| flagellar basal-body rod protein FlgC [Asticcacaulis biprosthecum
           C19]
          Length = 138

 Score = 98.4 bits (243), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 54/117 (46%), Positives = 75/117 (64%), Gaps = 1/117 (0%)

Query: 18  QSARMQIISENIANARTTGDTPGSDPYRRK-TISFEEVMHGSGGVRVKKIGVDQSTFVEE 76
           Q ARM++ +ENIANA + G TPG+DPYRR+  +     + G+ GVR+ ++  D   F  E
Sbjct: 21  QQARMRVTAENIANASSLGTTPGADPYRRQIPVFQSTNIDGATGVRLARVVPDMKEFATE 80

Query: 77  FDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +DP HP A+A G VK PNV+ L E+ DMRE  R Y ANL  I+ + DM    L++L+
Sbjct: 81  YDPSHPAADAQGYVKRPNVDTLTESMDMREAQRAYEANLNVIETARDMNQKILNILQ 137


>gi|307747446|gb|ADN90716.1| Flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
           jejuni M1]
          Length = 164

 Score = 98.4 bits (243), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 55/164 (33%), Positives = 70/164 (42%), Gaps = 32/164 (19%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRK------------- 47
           M YL     I+  GL+ Q  RM +IS NIANA TT    G    RR+             
Sbjct: 1   MAYLSD-FDISGYGLSAQRFRMNVISSNIANANTTRTAEGGPYRRREVIFKATDFDKLLN 59

Query: 48  ------------------TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGI 89
                               S EE       V V K+  D   F  ++DP HP ANA G 
Sbjct: 60  EQINKDNNFLKYENPLNDPSSPEEAKPAIQSVVVDKVVRDDKDFRMKYDPSHPDANAEGY 119

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           V YPNVN ++E AD+ E  R Y AN+     +  +  + +DLLR
Sbjct: 120 VAYPNVNPVIEMADLIEATRAYQANVSAFTSAKTIAQSAVDLLR 163


>gi|89056688|ref|YP_512139.1| flagellar basal body rod protein FlgC [Jannaschia sp. CCS1]
 gi|88866237|gb|ABD57114.1| flagellar basal-body rod protein FlgC [Jannaschia sp. CCS1]
          Length = 130

 Score = 98.0 bits (242), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 44/133 (33%), Positives = 66/133 (49%), Gaps = 4/133 (3%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M     +  +A SG+  Q+ R+  +SENIANA T G       +  +            G
Sbjct: 1   MTDFSNALSVAASGMRAQTQRLTHVSENIANADTPGYQRKITSFEVERGFSAVEGQVRTG 60

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
                + +DQ+     FDP HP+A+ +G  +  NV++++E AD RE NR Y ANL+   Q
Sbjct: 61  P----VRLDQTALPVIFDPSHPMADEAGSYEGSNVDLVIELADAREANRSYEANLRIFDQ 116

Query: 121 SHDMMTTTLDLLR 133
              M ++  DLLR
Sbjct: 117 IRQMSSSLNDLLR 129


>gi|85706171|ref|ZP_01037266.1| flagellar basal-body rod protein FlgC [Roseovarius sp. 217]
 gi|85669335|gb|EAQ24201.1| flagellar basal-body rod protein FlgC [Roseovarius sp. 217]
          Length = 130

 Score = 98.0 bits (242), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 51/136 (37%), Positives = 74/136 (54%), Gaps = 10/136 (7%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M     +  ++ SGL  Q+ R+  +SENIANA T G       YRRKT+SFE    GS G
Sbjct: 1   MSDFSNALSVSASGLKAQAQRLVHVSENIANADTPG-------YRRKTVSFETAFAGSEG 53

Query: 61  VR---VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
                V ++ +D+    + +DP HP+A+ +G  +   V++++E AD RE  R Y ANL+ 
Sbjct: 54  TGAVEVSRVNLDRRELQKIYDPSHPLADETGHYQGSTVDLMIEIADAREAQRSYEANLKM 113

Query: 118 IKQSHDMMTTTLDLLR 133
             Q   M    +DLLR
Sbjct: 114 FDQVRQMSAGLMDLLR 129


>gi|224373713|ref|YP_002608085.1| flagellar basal body rod protein FlgC [Nautilia profundicola AmH]
 gi|223589296|gb|ACM93032.1| flagellar basal-body rod protein FlgC [Nautilia profundicola AmH]
          Length = 165

 Score = 98.0 bits (242), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 43/165 (26%), Positives = 70/165 (42%), Gaps = 32/165 (19%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
                S  I+  GL+ Q  R+ IISENIANA TT    G    R++ I            
Sbjct: 1   MGFFNSFDISGYGLSAQRFRINIISENIANANTTRTDEGGPYRRKEVIFKAVPFEEQLNQ 60

Query: 62  RVKK--------------------------------IGVDQSTFVEEFDPGHPVANASGI 89
            +++                                +  D S  + ++DP +P A+A+G 
Sbjct: 61  EIEQNSKFHQYENPLDEEGENYAVAKPPIETVVVDKVVRDDSKPILKYDPSNPDADANGY 120

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
           V YPN+N ++E AD+ E  R Y AN+   + +  M  + +++L+ 
Sbjct: 121 VAYPNINPVIEMADLLEATRAYQANVAAFQSAKTMANSAINILQS 165


>gi|268680292|ref|YP_003304723.1| flagellar basal-body rod protein FlgC [Sulfurospirillum deleyianum
           DSM 6946]
 gi|268618323|gb|ACZ12688.1| flagellar basal-body rod protein FlgC [Sulfurospirillum deleyianum
           DSM 6946]
          Length = 163

 Score = 98.0 bits (242), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 45/163 (27%), Positives = 72/163 (44%), Gaps = 31/163 (19%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS----------- 50
              ++S  I++ GL+ Q  RM +IS NIANA TT  + G    R+  +            
Sbjct: 1   MAYLSSFDISSYGLSAQRFRMDLISSNIANANTTRTSEGGPYQRKDVVFKAVDFSKTLNE 60

Query: 51  --------------------FEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
                                E        V V K+  D+S F  +++P HP AN  G V
Sbjct: 61  KIAENNNMLEYENPLDDAFLQENANPAIMSVVVDKVVRDESEFTYKYEPSHPDANEEGYV 120

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            YPN+N ++E A++ E  R Y AN+   + +  +  + +D+L+
Sbjct: 121 AYPNINPVIEMANLIEATRAYQANVSAFQSAKAIAQSAIDILK 163


>gi|94987301|ref|YP_595234.1| flagellar basal body rod protein [Lawsonia intracellularis
           PHE/MN1-00]
 gi|94731550|emb|CAJ54913.1| Flagellar basal body rod protein [Lawsonia intracellularis
           PHE/MN1-00]
          Length = 146

 Score = 98.0 bits (242), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 41/146 (28%), Positives = 68/146 (46%), Gaps = 14/146 (9%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-- 58
           MD++  +  I  S L+     + + + N+ANA+TT    G    R+  I     +     
Sbjct: 1   MDFMT-AFDIGASALSADRTTINVTAMNLANAKTTRTPEGGPYRRKTVIRAATDVDEPFS 59

Query: 59  -----------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                       GVR+  +  D     + ++PGHP A+ +G+V YP++NV+ E A++   
Sbjct: 60  KQMQSALDRELKGVRILNVLPDNRPPKQIYEPGHPDADENGMVSYPDINVVEEMANLMTA 119

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
           +R Y AN  TI    +M    LD+ R
Sbjct: 120 SRNYEANSTTIDTVKNMYMRALDIGR 145


>gi|89075493|ref|ZP_01161904.1| Putative flagellar basal body rod protein FlgC [Photobacterium sp.
           SKA34]
 gi|89048765|gb|EAR54336.1| Putative flagellar basal body rod protein FlgC [Photobacterium sp.
           SKA34]
          Length = 138

 Score = 98.0 bits (242), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 39/138 (28%), Positives = 61/138 (44%), Gaps = 6/138 (4%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             L    ++  S ++ +S R+   S N+ANA +   +       R  I    +   S   
Sbjct: 1   MSLFNVFNVTGSAMSAESVRLNTTSSNLANANSVSSSAEETYKARHPIFAAALNSASYHQ 60

Query: 62  ------RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
                 +VK I         E++P HP+ANA G +  PNVNV+ E A+M   +R Y  N+
Sbjct: 61  SSSVPVQVKGIIESDKPLSAEYNPEHPMANAEGFIYKPNVNVMEEMANMISASRSYQNNV 120

Query: 116 QTIKQSHDMMTTTLDLLR 133
           Q    S  M+  TL + +
Sbjct: 121 QVADASKQMLMKTLQMGK 138


>gi|83646783|ref|YP_435218.1| flagellar basal-body rod protein FlgC [Hahella chejuensis KCTC
           2396]
 gi|83634826|gb|ABC30793.1| flagellar basal-body rod protein FlgC [Hahella chejuensis KCTC
           2396]
          Length = 133

 Score = 98.0 bits (242), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 40/133 (30%), Positives = 61/133 (45%), Gaps = 2/133 (1%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-G 59
           MDYL     I+ SGL  Q  R+Q ++ N+AN  +T    G+       ++  E   GS  
Sbjct: 1   MDYL-QVFDISGSGLDFQKLRLQAVATNLANVYSTSSKAGAAFKPLMAVATAEQSGGSLR 59

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GV   ++         ++DP HP ANA G V+ P +N + E   M    R Y AN+  + 
Sbjct: 60  GVGDMQLVERDVEPRLKYDPAHPHANADGYVEMPAINPVDEMTSMMLATRAYEANVSVLS 119

Query: 120 QSHDMMTTTLDLL 132
            +  M    L++ 
Sbjct: 120 AAKTMALKALEIG 132


>gi|332669188|ref|YP_004452196.1| flagellar basal-body rod protein FlgC [Cellulomonas fimi ATCC 484]
 gi|332338226|gb|AEE44809.1| flagellar basal-body rod protein FlgC [Cellulomonas fimi ATCC 484]
          Length = 132

 Score = 98.0 bits (242), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 32/133 (24%), Positives = 62/133 (46%), Gaps = 1/133 (0%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             +  +  IA++GL V    +  +S+N++N  T   T     +R K +   E    + GV
Sbjct: 1   MTIFGAIGIASTGLTVHRKWLDAVSDNLSNLSTVRPTSEEA-FRAKYVVAAESAGENQGV 59

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
           +V  I    +     ++PGHP+A+  G V+YP++++  +   +    R Y AN   + ++
Sbjct: 60  QVAGIVEGSAEGRLVYEPGHPLADEDGYVRYPDIDMSSQMTQLMMAQRGYQANAAVVDRA 119

Query: 122 HDMMTTTLDLLRD 134
            +     L + R 
Sbjct: 120 RETYNAALQIGRS 132


>gi|254227981|ref|ZP_04921411.1| flagellar basal-body rod protein FlgC [Vibrio sp. Ex25]
 gi|151939477|gb|EDN58305.1| flagellar basal-body rod protein FlgC [Vibrio sp. Ex25]
          Length = 144

 Score = 98.0 bits (242), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 32/142 (22%), Positives = 61/142 (42%), Gaps = 10/142 (7%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDP----------YRRKTISF 51
                   I  S +  Q+ R+  ++ N+ANA      P              Y++  ++ 
Sbjct: 1   MSFTDIYSITGSAMTAQTVRLNTVASNLANADAVSANPDDAYKALKPVFATVYQKAQLTT 60

Query: 52  EEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
           E  ++ +  VR+  +  +     + F+P +P+AN  G V YP+++V+ E ADM    R +
Sbjct: 61  ENGVYPNAEVRIVDVVKNAGEAEKRFEPNNPLANGEGYVYYPDIDVVAEMADMMSATRSF 120

Query: 112 MANLQTIKQSHDMMTTTLDLLR 133
             N++ +     M    L L +
Sbjct: 121 ETNVEVLSNVKSMQQGLLRLGQ 142


>gi|255264378|ref|ZP_05343720.1| flagellar basal-body rod protein FlgC [Thalassiobium sp. R2A62]
 gi|255106713|gb|EET49387.1| flagellar basal-body rod protein FlgC [Thalassiobium sp. R2A62]
          Length = 130

 Score = 98.0 bits (242), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 48/133 (36%), Positives = 71/133 (53%), Gaps = 4/133 (3%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M     S  I+ SG+A Q+ R++  SENIANA T G    +  +       +     + G
Sbjct: 1   MSDFSNSLAISASGMAAQTDRLRFTSENIANADTPGYRRKTTSFEAIVEQGQSTGAVTTG 60

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
             V    +D++     FDP HP+A+ASG  +  NV++L+E AD RE  R Y ANL+   Q
Sbjct: 61  PMV----LDKTELDRVFDPSHPMADASGYYQGTNVDLLIEIADAREAQRSYEANLKMFDQ 116

Query: 121 SHDMMTTTLDLLR 133
           S  M ++ ++LLR
Sbjct: 117 SRQMSSSLMELLR 129


>gi|108563932|ref|YP_628248.1| flagellar basal body rod protein FlgC [Helicobacter pylori HPAG1]
 gi|188528350|ref|YP_001911037.1| flagellar basal body rod protein FlgC [Helicobacter pylori Shi470]
 gi|217033829|ref|ZP_03439254.1| hypothetical protein HP9810_877g33 [Helicobacter pylori 98-10]
 gi|107837705|gb|ABF85574.1| flagellar basal-body rod protein [Helicobacter pylori HPAG1]
 gi|188144590|gb|ACD49007.1| flagellar basal body rod protein FlgC [Helicobacter pylori Shi470]
 gi|216943727|gb|EEC23170.1| hypothetical protein HP9810_877g33 [Helicobacter pylori 98-10]
 gi|308062841|gb|ADO04729.1| flagellar basal body rod protein FlgC [Helicobacter pylori Cuz20]
 gi|315585965|gb|ADU40346.1| flagellar basal-body rod protein FlgC [Helicobacter pylori 35A]
 gi|317013372|gb|ADU83980.1| flagellar basal body rod protein FlgC [Helicobacter pylori
           Lithuania75]
 gi|317179760|dbj|BAJ57548.1| flagellar basal body rod protein FlgC [Helicobacter pylori F30]
 gi|317181261|dbj|BAJ59047.1| flagellar basal body rod protein FlgC [Helicobacter pylori F32]
          Length = 161

 Score = 98.0 bits (242), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 48/159 (30%), Positives = 71/159 (44%), Gaps = 29/159 (18%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS------------- 50
            ++S  I+  GL+ Q  R  +IS NIANA TT  + G    R++ +              
Sbjct: 2   FLSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGGPYRRQEAVFKAFDFNEILNQKI 61

Query: 51  ----------------FEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPN 94
                            +  +     V V KI  D S  + ++DP HP ANA G V YPN
Sbjct: 62  AQNHQITPYEDPLDEGDDNPLIPITSVVVDKIVRDDSEPLMKYDPSHPDANAQGYVAYPN 121

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           VN +VE AD+ E  R Y AN+   + + +M    + +L+
Sbjct: 122 VNAVVEMADLVEATRAYQANVAAFQSAKNMAQNAIGMLQ 160


>gi|126734103|ref|ZP_01749850.1| flagellar basal-body rod protein FlgC [Roseobacter sp. CCS2]
 gi|126716969|gb|EBA13833.1| flagellar basal-body rod protein FlgC [Roseobacter sp. CCS2]
          Length = 130

 Score = 97.6 bits (241), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 45/133 (33%), Positives = 65/133 (48%), Gaps = 4/133 (3%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M     +  +A SG+  Q++R++ +SENIAN      TPG                 +G 
Sbjct: 1   MTDFSDAISVATSGMKAQASRLRHVSENIANTD----TPGYRRKAITFEELVTQGRTTGA 56

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V    + +DQ+     +DP HP+A+ +G     NVN+L+E AD RE  R Y ANL+   Q
Sbjct: 57  VETGPLRLDQTELKRVYDPSHPLADDTGHYNGSNVNLLIEIADAREAQRSYEANLKMFDQ 116

Query: 121 SHDMMTTTLDLLR 133
              M +   DLLR
Sbjct: 117 VRQMSSALNDLLR 129


>gi|239995127|ref|ZP_04715651.1| flagellar basal-body rod protein FlgC [Alteromonas macleodii ATCC
           27126]
          Length = 140

 Score = 97.6 bits (241), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 32/138 (23%), Positives = 61/138 (44%), Gaps = 6/138 (4%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH----- 56
             L     I+++G+  ++ R+   + NIANA +   +       R  +    +       
Sbjct: 1   MSLFNVMQISSTGMEAENVRLNTTASNIANANSVSSSYDETYRARHPVFATALQDAMRDQ 60

Query: 57  -GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
               GV+VK I    +    E+ P +P+A+ +G +  PNVN++ E A+M   ++ Y  N+
Sbjct: 61  SKGAGVQVKGIVESDAPLQMEYSPNNPMADENGYIYKPNVNIVEEMANMMSASKAYETNV 120

Query: 116 QTIKQSHDMMTTTLDLLR 133
           Q    +  +    L L +
Sbjct: 121 QVADTTKRIFRRVLQLGQ 138


>gi|260779349|ref|ZP_05888241.1| flagellar basal-body rod protein FlgC [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260605513|gb|EEX31808.1| flagellar basal-body rod protein FlgC [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 144

 Score = 97.6 bits (241), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 33/142 (23%), Positives = 59/142 (41%), Gaps = 10/142 (7%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDP----------YRRKTISF 51
                   IA S +  Q+ R+  ++ N+ANA      P              Y +  +S 
Sbjct: 1   MSFTDIYSIAGSAMNAQTVRLNTVASNLANADAVSANPDDAYKALKPVFATVYSKTQLSA 60

Query: 52  EEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
            +  + +  VR+  +        + F+P +P+AN  G V YP+++V+ E ADM    R +
Sbjct: 61  SKESYPNAEVRIVDVVQSAGQAEKRFEPSNPLANDEGYVYYPDIDVVSEMADMMSATRSF 120

Query: 112 MANLQTIKQSHDMMTTTLDLLR 133
             N++ +     M    L L +
Sbjct: 121 ETNVEVLSNVKSMQQGLLRLGQ 142


>gi|119384843|ref|YP_915899.1| flagellar basal body rod protein FlgC [Paracoccus denitrificans
           PD1222]
 gi|119374610|gb|ABL70203.1| flagellar basal body rod protein [Paracoccus denitrificans PD1222]
          Length = 130

 Score = 97.6 bits (241), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 43/133 (32%), Positives = 67/133 (50%), Gaps = 4/133 (3%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M   +++  +A SG+  Q+ R++ ISENIANA T G       +R +          + G
Sbjct: 1   MTNSLSATELAVSGMKSQAVRLRHISENIANADTPGYRRKLVAFREQVDFGRPTGAVTPG 60

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
                   D+       DP HP+A+  G     NV++++E AD +E  R Y ANL+  +Q
Sbjct: 61  PP----RFDRRELPRIHDPAHPMADEEGYYSGSNVDLIIEIADAKEAGRSYEANLRVFEQ 116

Query: 121 SHDMMTTTLDLLR 133
           S  M ++ LDL+R
Sbjct: 117 SRQMGSSLLDLIR 129


>gi|237753202|ref|ZP_04583682.1| flagellar basal-body rod protein flgc proximal rod protein
           [Helicobacter winghamensis ATCC BAA-430]
 gi|229375469|gb|EEO25560.1| flagellar basal-body rod protein flgc proximal rod protein
           [Helicobacter winghamensis ATCC BAA-430]
          Length = 166

 Score = 97.6 bits (241), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 44/164 (26%), Positives = 70/164 (42%), Gaps = 34/164 (20%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKT--------------- 48
            ++S  I+  GL+ Q  R+ +IS NIANA TT    G    RR+                
Sbjct: 2   FLSSFDISGYGLSAQRQRVNLISSNIANANTTRTDEGGPYRRRELVLKAFDFDKVLNQKY 61

Query: 49  -------------------ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGI 89
                                  +       V V KI  D +    +++P HP AN+ G 
Sbjct: 62  EKSNNLLEYEDPLNEMDSFDEQRKPKPALMSVYVDKIVRDDTQPRMKYEPSHPDANSEGY 121

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           V YPN+N +VE AD+ E ++ Y AN+   + + +M +T + + +
Sbjct: 122 VAYPNINPVVEMADLIEASKAYQANVAVFQSAKNMASTAISMFQ 165


>gi|261840251|gb|ACY00017.1| flagellar basal body rod protein FlgC [Helicobacter pylori 52]
 gi|332674370|gb|AEE71187.1| flagellar basal-body rod protein FlgC [Helicobacter pylori 83]
          Length = 161

 Score = 97.6 bits (241), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 48/159 (30%), Positives = 71/159 (44%), Gaps = 29/159 (18%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS------------- 50
            ++S  I+  GL+ Q  R  +IS NIANA TT  + G    R++ +              
Sbjct: 2   FLSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGGPYRRQEAVFKAFDFNEILNQKI 61

Query: 51  ----------------FEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPN 94
                            +  +     V V KI  D S  + ++DP HP ANA G V YPN
Sbjct: 62  AQNHQIAPYEDPLDEGDDNPLIPITSVVVDKIVRDDSEPLMKYDPSHPDANAQGYVAYPN 121

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           VN +VE AD+ E  R Y AN+   + + +M    + +L+
Sbjct: 122 VNAVVEMADLVEATRAYQANVAAFQSAKNMAQNAIGMLQ 160


>gi|313683371|ref|YP_004061109.1| flagellar basal-body rod protein flgc [Sulfuricurvum kujiense DSM
           16994]
 gi|313156231|gb|ADR34909.1| flagellar basal-body rod protein FlgC [Sulfuricurvum kujiense DSM
           16994]
          Length = 164

 Score = 97.3 bits (240), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 47/164 (28%), Positives = 70/164 (42%), Gaps = 31/164 (18%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG---- 57
              + S  I+  GL+ Q  R+  IS NIANA+TT    G    R++ I      +     
Sbjct: 1   MAFLNSFDISGYGLSAQRVRVNTISANIANAQTTRTNEGGPYRRQEVIFKAIDFNKVYNK 60

Query: 58  ---------------------------SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
                                         V V KI  D      +FDP HP A+A+G V
Sbjct: 61  ALENETSALEYSDPLKEGLAGLKPNPAIMSVVVDKISRDDKAPKMKFDPSHPDADANGYV 120

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
            YPN+N +VE AD+ E  R Y AN+   + + +M  + + +L++
Sbjct: 121 AYPNINPVVEMADLVEATRSYQANVAAFESAKNMAGSAISILQN 164


>gi|315452789|ref|YP_004073059.1| flagellar basal-body rod protein [Helicobacter felis ATCC 49179]
 gi|315131841|emb|CBY82469.1| flagellar basal-body rod protein [Helicobacter felis ATCC 49179]
          Length = 163

 Score = 97.3 bits (240), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 49/161 (30%), Positives = 73/161 (45%), Gaps = 31/161 (19%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF------------ 51
            ++S  I+  GL+ Q  R  +IS NIANA TT    G    R++ I              
Sbjct: 2   FLSSFDISGYGLSAQRVRANLISSNIANANTTRTDEGGPYRRQEAIFKSFDFNKILNEKL 61

Query: 52  -------------------EEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKY 92
                              E+      GV ++KI  D    + ++DP HP A+A+G V Y
Sbjct: 62  AQNNNLMEYEDPLDESDEIEKPNPPITGVYIEKIVRDDKAPLLKYDPTHPDADANGYVSY 121

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           PNVN +VE AD+ E  R Y AN+   + + +M T  + +L+
Sbjct: 122 PNVNPVVEMADLIEATRAYQANVAAFQSTKNMATNAIGMLQ 162


>gi|15646165|ref|NP_208349.1| flagellar basal body rod protein FlgC [Helicobacter pylori 26695]
 gi|217031711|ref|ZP_03437215.1| hypothetical protein HPB128_155g24 [Helicobacter pylori B128]
 gi|298737153|ref|YP_003729683.1| flagellar basal-body rod protein FlgC [Helicobacter pylori B8]
 gi|2314741|gb|AAD08598.1| flagellar basal-body rod protein (flgC) [Helicobacter pylori 26695]
 gi|216946558|gb|EEC25158.1| hypothetical protein HPB128_155g24 [Helicobacter pylori B128]
 gi|298356347|emb|CBI67219.1| flagellar basal-body rod protein FlgC [Helicobacter pylori B8]
          Length = 161

 Score = 97.3 bits (240), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 48/159 (30%), Positives = 70/159 (44%), Gaps = 29/159 (18%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH------- 56
            ++S  I+  GL+ Q  R  +IS NIANA TT  + G    R++ +      +       
Sbjct: 2   FLSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGGPYRRQEAVFKAFDFNEILNQKI 61

Query: 57  ----------------------GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPN 94
                                     V V KI  D S  + ++DP HP ANA G V YPN
Sbjct: 62  AQNNQITPYEDPLDEGDEYPLIPITSVVVDKIVRDDSEPLMKYDPSHPDANAQGYVAYPN 121

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           VN +VE AD+ E  R Y AN+   + + +M    + +L+
Sbjct: 122 VNAVVEMADLVEATRAYQANVAAFQSAKNMAQNAIGMLQ 160


>gi|317010250|gb|ADU80830.1| flagellar basal body rod protein FlgC [Helicobacter pylori India7]
          Length = 161

 Score = 97.3 bits (240), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 48/159 (30%), Positives = 71/159 (44%), Gaps = 29/159 (18%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS------------- 50
            ++S  I+  GL+ Q  R  +IS NIANA TT  + G    R++ +              
Sbjct: 2   FLSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGGPYRRQEAVFKAFDFNEILNQKI 61

Query: 51  ----------------FEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPN 94
                            +  +     V V KI  D S  + ++DP HP ANA G V YPN
Sbjct: 62  AQNHQITPYEDPLDEGDDNSLIPITSVVVDKIVRDDSEPLMKYDPSHPDANAQGYVAYPN 121

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           VN +VE AD+ E  R Y AN+   + + +M    + +L+
Sbjct: 122 VNAVVEMADLVEATRAYQANVAAFQSAKNMAQNAIGMLQ 160


>gi|241761153|ref|ZP_04759242.1| flagellar basal-body rod protein FlgC [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
 gi|241374772|gb|EER64233.1| flagellar basal-body rod protein FlgC [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
          Length = 134

 Score = 97.3 bits (240), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 34/134 (25%), Positives = 60/134 (44%), Gaps = 1/134 (0%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-G 59
           MD  ++   I+   ++ Q  R+   + N+ANA +   +  +  +  K I           
Sbjct: 1   MDRPLSIFDISGRAMSAQLVRLNTNASNLANANSVASSKEAAFHPLKPIFSTVTQSPGIA 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
            V+V K+    S   +  DP HP+A+ +G V    V+   E  +M ET R Y  N+Q ++
Sbjct: 61  TVKVNKVVATGSPPTQIHDPTHPLADENGDVWAAGVDTAQEMVEMIETARDYQNNVQVMQ 120

Query: 120 QSHDMMTTTLDLLR 133
            +  +   TL + R
Sbjct: 121 TAKSLTLDTLKMER 134


>gi|89072317|ref|ZP_01158896.1| flagellar basal body rod protein [Photobacterium sp. SKA34]
 gi|89051849|gb|EAR57301.1| flagellar basal body rod protein [Photobacterium sp. SKA34]
          Length = 144

 Score = 97.3 bits (240), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 34/141 (24%), Positives = 59/141 (41%), Gaps = 10/141 (7%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDP----------YRRKTISF 51
                   IA S +  Q+ R+  ++ N+ANA      P              Y +  ++ 
Sbjct: 1   MAFTDIYSIAGSAMNAQTIRLNTVASNLANADAVAANPDDAYKALKPVFATVYNKTQLTG 60

Query: 52  EEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
           E+  + S  VR+  +        + F+P +P+AN  G V YP+++V+ E ADM    R +
Sbjct: 61  EQADYPSAEVRIMDVVQHAGDAEKRFEPSNPLANEEGYVYYPDIDVVAEMADMMSATRSF 120

Query: 112 MANLQTIKQSHDMMTTTLDLL 132
             N++ +     M    L L 
Sbjct: 121 ETNVEVLSNVKSMQQGLLRLG 141


>gi|119477955|ref|ZP_01618055.1| flagellar basal-body rod protein FlgC [marine gamma proteobacterium
           HTCC2143]
 gi|119448868|gb|EAW30110.1| flagellar basal-body rod protein FlgC [marine gamma proteobacterium
           HTCC2143]
          Length = 147

 Score = 97.3 bits (240), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 40/147 (27%), Positives = 60/147 (40%), Gaps = 15/147 (10%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG---- 57
             L     IA  G++ QS R+   + N+ANA+            R  +     M      
Sbjct: 1   MSLANVFDIAGMGMSAQSIRLNTTASNLANAQAASSNIDEVYRARHPVFETMRMDMMANN 60

Query: 58  -----------SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
                      S G+RV  I    +  V  ++P H  A+  G V YPNVNV+ E ADM  
Sbjct: 61  NGSMPTLADDASMGMRVTGIVESDAPLVRRYEPNHLKADEEGYVYYPNVNVVEEMADMIS 120

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
            +R +  N++ +  +  MM   L L +
Sbjct: 121 ASRSFQVNVELMNSAKQMMQGLLRLGQ 147


>gi|317182784|dbj|BAJ60568.1| flagellar basal body rod protein FlgC [Helicobacter pylori F57]
          Length = 161

 Score = 97.3 bits (240), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 49/159 (30%), Positives = 71/159 (44%), Gaps = 29/159 (18%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKT--------------- 48
            ++S  I+  GL+ Q  R  +IS NIANA TT  + G    R++                
Sbjct: 2   FLSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGGPYRRQEAVFKAFDFNEILNQKI 61

Query: 49  --------------ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPN 94
                          S +  +     V V KI  D S  + ++DP HP ANA G V YPN
Sbjct: 62  AQNHQITPYEDPLDESDDNPLIPITSVVVDKIVRDDSEPLMKYDPSHPDANAQGYVAYPN 121

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           VN +VE AD+ E  R Y AN+   + + +M    + +L+
Sbjct: 122 VNAVVEMADLVEATRAYQANVAAFQSAKNMAQNAIGMLQ 160


>gi|297380732|gb|ADI35619.1| flagellar basal-body rod protein FlgC [Helicobacter pylori v225d]
          Length = 161

 Score = 97.3 bits (240), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 48/159 (30%), Positives = 70/159 (44%), Gaps = 29/159 (18%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS------------- 50
            ++S  I+  GL+ Q  R  +IS NIANA TT  + G    R++ +              
Sbjct: 2   FLSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGGPYRRQEAVFKAFDFNEILNQKI 61

Query: 51  ----------------FEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPN 94
                               +     V V KI  D S  + ++DP HP ANA G V YPN
Sbjct: 62  AQNHQITPYEDPLDEGDNNPLIPITSVVVDKIVRDDSEPLMKYDPSHPDANAQGYVAYPN 121

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           VN +VE AD+ E  R Y AN+   + + +M    + +L+
Sbjct: 122 VNAVVEMADLVEATRAYQANVAAFQSAKNMAQNAIGMLQ 160


>gi|261838846|gb|ACX98612.1| flagellar basal-body rod protein [Helicobacter pylori 51]
          Length = 161

 Score = 96.9 bits (239), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 48/159 (30%), Positives = 71/159 (44%), Gaps = 29/159 (18%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS------------- 50
            ++S  I+  GL+ Q  R  +IS NIANA TT  + G    R++ +              
Sbjct: 2   FLSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGGPYRRQEAVFKAFDFNEILNQKI 61

Query: 51  ----------------FEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPN 94
                            +  +     V V KI  D S  + ++DP HP ANA G V YPN
Sbjct: 62  AQNHQITPYENPLDEGDDNPLIPITSVVVDKIVRDDSEPLMKYDPSHPDANAQGYVAYPN 121

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           VN +VE AD+ E  R Y AN+   + + +M    + +L+
Sbjct: 122 VNAVVEMADLVEATRAYQANVAAFQSAKNMAQNAIGMLQ 160


>gi|327478807|gb|AEA82117.1| flagellar basal body rod protein FlgC [Pseudomonas stutzeri DSM
           4166]
          Length = 142

 Score = 96.9 bits (239), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 30/140 (21%), Positives = 57/140 (40%), Gaps = 9/140 (6%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--- 58
               +   IA S +  Q+ R+  ++ N+AN  +    P      RK +      + S   
Sbjct: 1   MSFDSIYRIAGSSMNAQTVRLNTVASNLANTDSAAANPADVYQARKPMFAAVYENNSLTR 60

Query: 59  ------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
                   V+V  +    +     ++PG+P+A+  G V YP++N + E  DM    R + 
Sbjct: 61  GVGLGGAHVQVLDVVTSGAEPKRRYEPGNPLADGEGYVYYPDINEIEEMTDMMSATRSFE 120

Query: 113 ANLQTIKQSHDMMTTTLDLL 132
             ++ + +   M  + L L 
Sbjct: 121 TGVEVLNRVKSMQQSLLRLG 140


>gi|227876737|ref|ZP_03994846.1| flagellar basal body rod protein [Mobiluncus mulieris ATCC 35243]
 gi|269976264|ref|ZP_06183260.1| flagellar basal-body rod protein FlgC [Mobiluncus mulieris 28-1]
 gi|306817684|ref|ZP_07451426.1| flagellar basal-body rod protein FlgC [Mobiluncus mulieris ATCC
           35239]
 gi|307699910|ref|ZP_07636961.1| flagellar basal-body rod protein FlgC [Mobiluncus mulieris
           FB024-16]
 gi|227842634|gb|EEJ52834.1| flagellar basal body rod protein [Mobiluncus mulieris ATCC 35243]
 gi|269935593|gb|EEZ92131.1| flagellar basal-body rod protein FlgC [Mobiluncus mulieris 28-1]
 gi|304649498|gb|EFM46781.1| flagellar basal-body rod protein FlgC [Mobiluncus mulieris ATCC
           35239]
 gi|307614948|gb|EFN94166.1| flagellar basal-body rod protein FlgC [Mobiluncus mulieris
           FB024-16]
          Length = 132

 Score = 96.9 bits (239), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 31/129 (24%), Positives = 55/129 (42%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
             +  IA +G+ V    +  IS+NIAN  TT          R  ++         G  V 
Sbjct: 4   FGAIGIAGTGMTVNRKWLDCISDNIANINTTKPMNEEAFRARYVVAQAVDYGRPAGTMVA 63

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
            I +  +     +DP  P ANA G V++P++++  + + +    R Y AN   + ++   
Sbjct: 64  GIALGGTDGRIVYDPKDPNANAEGYVRHPDIDLGSQMSQLIMAQRAYQANAAVVDRAKAT 123

Query: 125 MTTTLDLLR 133
             + L + R
Sbjct: 124 YESALQIGR 132


>gi|296124187|ref|YP_003631965.1| flagellar basal-body rod protein FlgC [Planctomyces limnophilus DSM
           3776]
 gi|296016527|gb|ADG69766.1| flagellar basal-body rod protein FlgC [Planctomyces limnophilus DSM
           3776]
          Length = 137

 Score = 96.9 bits (239), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 46/136 (33%), Positives = 66/136 (48%), Gaps = 7/136 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH------- 56
           +  +  I+ SGL  Q  RM  I+ NIAN  TT +  G     ++ +   +          
Sbjct: 1   MFHTLDISTSGLIAQRTRMDTIAGNIANVNTTQNEEGKIAPFQRRLVMMQPASVGATSPT 60

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
           GS GV         S     ++PGHP ANA G V YPN+NV+ E  +  E +R Y AN+ 
Sbjct: 61  GSQGVASTVEIDTVSPPRMAYEPGHPHANAEGKVLYPNINVVTEFVNAMEASRAYEANVT 120

Query: 117 TIKQSHDMMTTTLDLL 132
           T++ + DM+  T  LL
Sbjct: 121 TMEVTKDMIQNTFRLL 136


>gi|238782790|ref|ZP_04626819.1| Flagellar basal-body rod protein flgC [Yersinia bercovieri ATCC
           43970]
 gi|238716213|gb|EEQ08196.1| Flagellar basal-body rod protein flgC [Yersinia bercovieri ATCC
           43970]
          Length = 121

 Score = 96.9 bits (239), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 36/121 (29%), Positives = 59/121 (48%), Gaps = 2/121 (1%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM--HGSGGVRVKKIGVDQST 72
           +A QS R+ + + N+ANA +     G     R+ +           GGVRV  +      
Sbjct: 1   MAAQSKRLNVSASNMANADSAVGPDGQPYRARQVVFQVNSAPGQEIGGVRVSDVMESSDP 60

Query: 73  FVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
               ++PG+P+A+  G V+ PNVNV+ E  +    +R Y AN++ +  +  MM  TL L 
Sbjct: 61  DRMVYEPGNPLADDKGYVRMPNVNVVSEMVNTISASRSYQANVEVLNTAKSMMLKTLTLG 120

Query: 133 R 133
           +
Sbjct: 121 Q 121


>gi|109948140|ref|YP_665368.1| flagellar basal body rod protein FlgC [Helicobacter acinonychis
           str. Sheeba]
 gi|109715361|emb|CAK00369.1| flagellar basal-body rod protein [Helicobacter acinonychis str.
           Sheeba]
          Length = 161

 Score = 96.9 bits (239), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 48/159 (30%), Positives = 71/159 (44%), Gaps = 29/159 (18%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS------------- 50
            ++S  I+  GL+ Q  R  +IS NIANA TT  + G    R++ +              
Sbjct: 2   FLSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGGPYRRQEAVFKAFDFNEVLNQKI 61

Query: 51  ----------------FEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPN 94
                            +  +     V V KI  D S  + ++DP HP ANA G V YPN
Sbjct: 62  AQNNQIIPYEDPLDEGDDNPLIPITSVVVDKIVRDDSEPLMKYDPSHPDANAQGYVAYPN 121

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           VN +VE AD+ E  R Y AN+   + + +M    + +L+
Sbjct: 122 VNAVVEMADLVEATRAYQANVAAFQSAKNMAQNAIGMLQ 160


>gi|325109010|ref|YP_004270078.1| flagellar basal-body rod protein FlgC [Planctomyces brasiliensis
           DSM 5305]
 gi|324969278|gb|ADY60056.1| flagellar basal-body rod protein FlgC [Planctomyces brasiliensis
           DSM 5305]
          Length = 133

 Score = 96.9 bits (239), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 40/132 (30%), Positives = 64/132 (48%), Gaps = 3/132 (2%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS---GG 60
           +  +  I  SGL  Q  R+  I+EN+AN +TT D  G+    ++          S    G
Sbjct: 1   MFRTIDIITSGLVAQRQRLNTIAENVANQQTTRDAEGNVSPFQRRFVTFAADSDSTEAAG 60

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V+ +    DQ+     ++PGHP ANA G V YP +N++ E  +  E +R Y AN+ +   
Sbjct: 61  VKFEVEKDDQTPPRLVYEPGHPDANAEGYVAYPAINMVTEFVNAMEASRAYEANVVSFST 120

Query: 121 SHDMMTTTLDLL 132
           +  +    L +L
Sbjct: 121 TQKIGEMALRIL 132


>gi|256833243|ref|YP_003161970.1| flagellar basal body rod protein [Jonesia denitrificans DSM 20603]
 gi|256686774|gb|ACV09667.1| flagellar basal body rod protein [Jonesia denitrificans DSM 20603]
          Length = 134

 Score = 96.5 bits (238), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 29/131 (22%), Positives = 60/131 (45%), Gaps = 1/131 (0%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV-MHGSGGVRV 63
             +  IA++GL V    +  +S+N+AN  T   T       R  I+        + G +V
Sbjct: 4   FGAIGIASTGLTVNRKWLDAVSDNLANVNTVRPTDEEAFQARYVIAQAAGGPRDTAGTQV 63

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
             I +  +     ++P HP+A+  G V+YP++++  + + +    R Y A+   ++++  
Sbjct: 64  AGIELGSAEGRLVYEPDHPLADEGGYVRYPDIDLSSQMSQLIMAQRGYQASTAVVERARA 123

Query: 124 MMTTTLDLLRD 134
                L + R+
Sbjct: 124 TYEQALSIGRN 134


>gi|153951079|ref|YP_001398445.1| flagellar basal body rod protein FlgC [Campylobacter jejuni subsp.
           doylei 269.97]
 gi|152938525|gb|ABS43266.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
           doylei 269.97]
          Length = 164

 Score = 96.5 bits (238), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 54/164 (32%), Positives = 69/164 (42%), Gaps = 32/164 (19%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRK------------- 47
           M YL     I+  GL+ Q  RM +IS NIAN  TT    G    RR+             
Sbjct: 1   MAYLSD-FDISGYGLSAQRFRMSVISSNIANVNTTRTAEGGPYRRREVIFKATDFDKLLN 59

Query: 48  ------------------TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGI 89
                               S EE       V V K+  D   F  ++DP HP ANA G 
Sbjct: 60  EQINKNNNFLKYENPLNDPSSPEEAKPAIQSVVVDKVVRDDKDFRMKYDPSHPDANAEGY 119

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           V YPNVN ++E AD+ E  R Y AN+     +  +  + +DLLR
Sbjct: 120 VAYPNVNPVIEMADLIEATRAYQANVSAFTSAKTIAQSAIDLLR 163


>gi|210135737|ref|YP_002302176.1| flagellar basal body rod protein FlgC [Helicobacter pylori P12]
 gi|210133705|gb|ACJ08696.1| flagellar basal-body rod protein FlgC [Helicobacter pylori P12]
          Length = 161

 Score = 96.5 bits (238), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 48/159 (30%), Positives = 71/159 (44%), Gaps = 29/159 (18%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS------------- 50
            ++S  I+  GL+ Q  R  +IS NIANA TT  + G    R++ +              
Sbjct: 2   FLSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGGPYRRQEAVFKAFDFNEILNQKI 61

Query: 51  ----------------FEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPN 94
                            +  +     V V KI  D S  + ++DP HP ANA G V YPN
Sbjct: 62  AQNNQITPYEDPLDEGDDNPLIPITSVVVDKIVRDDSEPLMKYDPSHPDANAQGYVAYPN 121

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           VN +VE AD+ E  R Y AN+   + + +M    + +L+
Sbjct: 122 VNAVVEMADLVEATRAYQANVAAFQSAKNMAQNAIGMLQ 160


>gi|167630287|ref|YP_001680786.1| flagellar basal-body rod protein flgc, putative [Heliobacterium
           modesticaldum Ice1]
 gi|167593027|gb|ABZ84775.1| flagellar basal-body rod protein flgc, putative [Heliobacterium
           modesticaldum Ice1]
          Length = 159

 Score = 96.5 bits (238), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 50/158 (31%), Positives = 67/158 (42%), Gaps = 26/158 (16%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGD----TPGSDPYRRKTISFEEVMHG 57
              ++S   + SGL  Q  RM IIS N+AN  TT        G  PYRR+   F      
Sbjct: 1   MRFLSSIDTSASGLTAQRFRMDIISNNLANVNTTRTGNSDADGVLPYRRQIPVFAARQAE 60

Query: 58  S------------------GGVRVKKIGVDQSTFVEEFDPGHPVA----NASGIVKYPNV 95
           +                  GGVRV  +  D+S F   +DP HP A      +G V+ PNV
Sbjct: 61  ADTFASALSAAENRRNATGGGVRVVAVAEDESAFKMIYDPQHPDAIRTGPLTGYVRMPNV 120

Query: 96  NVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           N + E  DM    R Y AN+  I  +  M    L++ +
Sbjct: 121 NTVTEMVDMISATRAYEANVTAINAAKSMAMKALEIGK 158


>gi|317011794|gb|ADU85541.1| flagellar basal body rod protein FlgC [Helicobacter pylori
           SouthAfrica7]
          Length = 161

 Score = 96.5 bits (238), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 49/159 (30%), Positives = 71/159 (44%), Gaps = 29/159 (18%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKT--------------- 48
            ++S  I+  GL+ Q  R  +IS NIANA TT  + G    R++                
Sbjct: 2   FLSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGGPYRRQEAVFKAFDFNEILNQKI 61

Query: 49  --------------ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPN 94
                          S +  +     V V KI  D S  + ++DP HP ANA G V YPN
Sbjct: 62  AQNNQIIPYEDPLDESDDTPLIPITSVVVDKIVRDDSEPLMKYDPSHPDANAQGYVAYPN 121

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           VN +VE AD+ E  R Y AN+   + + +M    + +L+
Sbjct: 122 VNAVVEMADLVEATRAYQANVAAFQSAKNMAQNAIGMLQ 160


>gi|332284017|ref|YP_004415928.1| flagellar basal body rod protein FlgC [Pusillimonas sp. T7-7]
 gi|330427970|gb|AEC19304.1| flagellar basal body rod protein FlgC [Pusillimonas sp. T7-7]
          Length = 138

 Score = 96.5 bits (238), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 41/135 (30%), Positives = 64/135 (47%), Gaps = 6/135 (4%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE------VMHGS 58
            +   IA S L  QS RM + + N+ANA +     G     R+ +               
Sbjct: 4   SSIFQIAGSALTAQSQRMNVTASNLANADSVAGPDGQPYRARQVVFQMAPVAGQSQAAAV 63

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
           GGVRV  +    +    ++DP +P+AN  G V  PNV+V+ ET +M   +R Y AN++ I
Sbjct: 64  GGVRVAAVVESAAPPRLQYDPKNPLANDDGYVTMPNVDVVAETVNMISASRSYQANVEVI 123

Query: 119 KQSHDMMTTTLDLLR 133
             +  +M  TL + +
Sbjct: 124 NTAKSLMMRTLSIGQ 138


>gi|307638243|gb|ADN80693.1| Flagellar basal-body rod protein [Helicobacter pylori 908]
 gi|325996836|gb|ADZ52241.1| Flagellar basal-body rod protein [Helicobacter pylori 2018]
 gi|325998428|gb|ADZ50636.1| Flagellar basal-body rod protein [Helicobacter pylori 2017]
          Length = 161

 Score = 96.5 bits (238), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 48/159 (30%), Positives = 71/159 (44%), Gaps = 29/159 (18%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF------------ 51
            ++S  I+  GL+ Q  R  +IS NIANA TT  + G    R++ +              
Sbjct: 2   FLSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGGPYRRQEAVFRAFDFNEILNQKI 61

Query: 52  -----------------EEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPN 94
                            +  +     V V KI  D S  + ++DP HP ANA G V YPN
Sbjct: 62  TQNNQITPYEDPLDEGDDNPLIPITSVVVDKIVRDDSEPLMKYDPSHPDANAQGYVAYPN 121

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           VN +VE AD+ E  R Y AN+   + + +M    + +L+
Sbjct: 122 VNAVVEMADLVEATRAYQANVAAFQSAKNMAQNAIGMLQ 160


>gi|330447901|ref|ZP_08311549.1| flagellar basal-body rod protein FlgC [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
 gi|328492092|dbj|GAA06046.1| flagellar basal-body rod protein FlgC [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
          Length = 144

 Score = 96.5 bits (238), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 34/141 (24%), Positives = 59/141 (41%), Gaps = 10/141 (7%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDP----------YRRKTISF 51
                   IA S +  Q+ R+  ++ N+ANA      P              Y +  ++ 
Sbjct: 1   MAFTDIYAIAGSAMNAQTIRLNTVASNLANADAVAANPDDAYQALKPVFATVYGKTQLTG 60

Query: 52  EEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
           E+  + S  VR+  +        + F+P +P+AN  G V YP+++V+ E ADM    R +
Sbjct: 61  EQANYPSAEVRIMDVVQHAGEAEKRFEPSNPLANEEGYVYYPDIDVVAEMADMMSATRSF 120

Query: 112 MANLQTIKQSHDMMTTTLDLL 132
             N++ +     M    L L 
Sbjct: 121 ETNVEVLSNVKSMQQGLLRLG 141


>gi|149178731|ref|ZP_01857314.1| flagellar basal-body rod potein FlgC [Planctomyces maris DSM 8797]
 gi|148842429|gb|EDL56809.1| flagellar basal-body rod potein FlgC [Planctomyces maris DSM 8797]
          Length = 137

 Score = 96.5 bits (238), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 37/136 (27%), Positives = 65/136 (47%), Gaps = 7/136 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGD-TPGSDPYRRKTISFEEVMHG----- 57
           ++    I+ S L  Q  RM  I+ NIA    + D   G +P+ R+ ++F+          
Sbjct: 1   MLKGIDISTSALVAQRQRMNTIAGNIAAVNVSHDPASGEEPFYRRMVTFQADTESLDQNA 60

Query: 58  -SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
              GV+        +   + +DPGH  A+  G V YPN++++ E  +  E  R Y AN+ 
Sbjct: 61  SGTGVKYHVEIDTDTPLRKTYDPGHRHADQDGNVTYPNIDLVTEFVNALEAGRAYEANIS 120

Query: 117 TIKQSHDMMTTTLDLL 132
            +  + +M +T+L +L
Sbjct: 121 ALDITKEMFSTSLRIL 136


>gi|308185345|ref|YP_003929478.1| flagellar basal body rod protein FlgC [Helicobacter pylori SJM180]
 gi|308061265|gb|ADO03161.1| flagellar basal body rod protein FlgC [Helicobacter pylori SJM180]
          Length = 161

 Score = 96.5 bits (238), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 48/159 (30%), Positives = 71/159 (44%), Gaps = 29/159 (18%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF------------ 51
            ++S  I+  GL+ Q  R  +IS NIANA TT  + G    R++ +              
Sbjct: 2   FLSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGGPYRRQEAVFRAFDFNEILNQKI 61

Query: 52  -----------------EEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPN 94
                            +  +     V V KI  D S  + ++DP HP ANA G V YPN
Sbjct: 62  AQNNQIIPYEDPLDEGDDNPLIPITSVVVDKIVRDDSEPLMKYDPSHPDANAQGYVAYPN 121

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           VN +VE AD+ E  R Y AN+   + + +M    + +L+
Sbjct: 122 VNAVVEMADLVEATRAYQANVAAFQSAKNMAQNAIGMLQ 160


>gi|254780090|ref|YP_003058197.1| flagellar basal body rod protein FlgC [Helicobacter pylori B38]
 gi|254002003|emb|CAX30262.1| Flagellar basal-body rod protein FlgC [Helicobacter pylori B38]
          Length = 161

 Score = 96.5 bits (238), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 47/159 (29%), Positives = 70/159 (44%), Gaps = 29/159 (18%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS------------- 50
            ++S  I+  GL+ Q  R  +IS NIAN  TT  + G    R++ +              
Sbjct: 2   FLSSFDISGYGLSAQRLRANLISSNIANVNTTRTSEGGPYRRQEAVFKAFDFNEILNQKI 61

Query: 51  ----------------FEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPN 94
                            +  +     V V KI  D S  + ++DP HP ANA G V YPN
Sbjct: 62  AQNNQIIPYEDPLDEGDDNPLIPITSVVVDKIVRDDSEPLMKYDPSHPDANAQGYVAYPN 121

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           VN +VE AD+ E  R Y AN+   + + +M    + +L+
Sbjct: 122 VNAVVEMADLVEATRAYQANVAAFQSAKNMAQNAIGMLQ 160


>gi|90577342|ref|ZP_01233153.1| flagellar basal body rod protein [Vibrio angustum S14]
 gi|90440428|gb|EAS65608.1| flagellar basal body rod protein [Vibrio angustum S14]
          Length = 144

 Score = 96.5 bits (238), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 33/141 (23%), Positives = 59/141 (41%), Gaps = 10/141 (7%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDP----------YRRKTISF 51
                   IA S +  Q+ R+  ++ N+ANA      P              Y +  ++ 
Sbjct: 1   MAFTDIYSIAGSAMNAQTIRLNTVASNLANADAVAANPNDAYKALKPVFATVYNKTQLTG 60

Query: 52  EEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
           ++  + S  VR+  +        + F+P +P+AN  G V YP+++V+ E ADM    R +
Sbjct: 61  DQADYPSAEVRIMDVVQHAGEAEKRFEPSNPLANEEGYVYYPDIDVVAEMADMMSATRSF 120

Query: 112 MANLQTIKQSHDMMTTTLDLL 132
             N++ +     M    L L 
Sbjct: 121 ETNVEVLSNVKSMQQGLLRLG 141


>gi|317178281|dbj|BAJ56070.1| flagellar basal body rod protein FlgC [Helicobacter pylori F16]
          Length = 161

 Score = 96.5 bits (238), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 48/159 (30%), Positives = 71/159 (44%), Gaps = 29/159 (18%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS------------- 50
            ++S  I+  GL+ Q  R  +IS NIANA TT  + G    R++ +              
Sbjct: 2   FLSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGGPYRRQEAVFKAFDFNEILNQKI 61

Query: 51  ----------------FEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPN 94
                            +  +     V V KI  D S  + ++DP HP ANA G V YPN
Sbjct: 62  AQNHQITPYEDPLDEGDDNPLIPITSVMVDKIVRDDSEPLMKYDPSHPDANAQGYVAYPN 121

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           VN +VE AD+ E  R Y AN+   + + +M    + +L+
Sbjct: 122 VNAVVEMADLVEATRAYQANVVAFQSAKNMAQNAIGMLQ 160


>gi|126738582|ref|ZP_01754287.1| flagellar basal-body rod protein FlgC [Roseobacter sp. SK209-2-6]
 gi|126720381|gb|EBA17087.1| flagellar basal-body rod protein FlgC [Roseobacter sp. SK209-2-6]
          Length = 130

 Score = 96.5 bits (238), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 42/133 (31%), Positives = 71/133 (53%), Gaps = 4/133 (3%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M     S ++  SGL  Q+ R++ +SENI+NA T G    + P+        +      G
Sbjct: 1   MSEFANSLNVTASGLKAQAKRLRHVSENISNADTPGYRRKTVPFLAVRELQNDAEKVETG 60

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
               ++ +D++     +DP HP+A+ +G  +  NV++++E AD RE  R Y ANL+  +Q
Sbjct: 61  ----RVTLDRTELTNIYDPTHPMADDTGHYEGSNVDLMIEIADAREAQRSYDANLKMFEQ 116

Query: 121 SHDMMTTTLDLLR 133
           +  M  + +DLLR
Sbjct: 117 TRSMSASLMDLLR 129


>gi|256376475|ref|YP_003100135.1| hypothetical protein Amir_2349 [Actinosynnema mirum DSM 43827]
 gi|255920778|gb|ACU36289.1| protein of unknown function DUF1078 domain protein [Actinosynnema
           mirum DSM 43827]
          Length = 132

 Score = 96.5 bits (238), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 33/132 (25%), Positives = 60/132 (45%), Gaps = 2/132 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             L  S  IA +G++V    +  +++NIAN      T G     R  ++        GGV
Sbjct: 1   MALFDSIGIAETGVSVHRKWLDAVADNIANVNNATSTAGPAFQARYVVARSRGED--GGV 58

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
            V  +    +     ++P +P+A+A+G V+YP++++  +   +    R Y ANL  + ++
Sbjct: 59  TVGGVLSGDAEGKIVYEPTNPLADANGNVRYPDIDLGEQMGQLIMAQRGYQANLAVVDRA 118

Query: 122 HDMMTTTLDLLR 133
                  L L R
Sbjct: 119 KTAYEAALQLGR 130


>gi|291334310|gb|ADD93971.1| predicted flagellar proximal rod protein [uncultured marine
           bacterium MedDCM-OCT-S09-C247]
          Length = 138

 Score = 96.1 bits (237), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 31/138 (22%), Positives = 54/138 (39%), Gaps = 5/138 (3%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG--- 57
           M  L     +A  G++ Q  R+  ++ N+ANAR+   +        K +           
Sbjct: 1   MADLKNIFDVAARGMSAQMVRLNTVASNLANARSVASSEAEAYRAIKPVFSTLYADDLER 60

Query: 58  --SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
                V V  I        + + PGHP A+  G +    VN   E  +M E +R Y  N+
Sbjct: 61  SGVSSVDVVDIVAVDREPEKVYQPGHPKADEDGYIYMAAVNTEEELVEMLEASRQYENNV 120

Query: 116 QTIKQSHDMMTTTLDLLR 133
           + +     +M  T+ + +
Sbjct: 121 EVVSTLRGLMMRTISMGK 138


>gi|157373209|ref|YP_001471809.1| flagellar basal-body rod protein FlgC [Shewanella sediminis
           HAW-EB3]
 gi|157315583|gb|ABV34681.1| flagellar basal-body rod protein FlgC [Shewanella sediminis
           HAW-EB3]
          Length = 139

 Score = 96.1 bits (237), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 35/137 (25%), Positives = 55/137 (40%), Gaps = 6/137 (4%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
                   IA +G+  QS R+  ++ N+ANA    +T  S     K +          G 
Sbjct: 1   MSFGEIYQIAGAGMHAQSIRLNTVASNLANAGAAAETQDSAYRALKPVFSTIYNQTQAGE 60

Query: 62  ------RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
                  V  I    +     ++P HP A+  G V Y NVN + E ADM   +R +  ++
Sbjct: 61  VSGAQVEVAAIVETDAPLDMRYEPDHPFADEQGYVAYSNVNTVEEMADMMAASRSFETSV 120

Query: 116 QTIKQSHDMMTTTLDLL 132
           + + Q+  M    L L 
Sbjct: 121 EVMNQARSMQQGLLQLG 137


>gi|308064340|gb|ADO06227.1| flagellar basal body rod protein FlgC [Helicobacter pylori Sat464]
          Length = 161

 Score = 96.1 bits (237), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 48/159 (30%), Positives = 71/159 (44%), Gaps = 29/159 (18%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS------------- 50
            ++S  I+  GL+ Q  R  +IS NIANA TT  + G    R++ +              
Sbjct: 2   FLSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGGPYRRQEAVFKAFDFNEILNQKI 61

Query: 51  ----------------FEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPN 94
                            +  +     V V KI  D S  + ++DP HP ANA G V YPN
Sbjct: 62  AQNNQIAPYEDPLDEGDDNPLIPITSVVVDKIVRDDSEPLMKYDPSHPDANAQGYVAYPN 121

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           VN +VE AD+ E  R Y AN+   + + +M    + +L+
Sbjct: 122 VNAVVEMADLVEATRAYQANVAAFQSAKNMAQNAIGMLQ 160


>gi|170737036|ref|YP_001778296.1| flagellar basal-body rod protein FlgC [Burkholderia cenocepacia
           MC0-3]
 gi|169819224|gb|ACA93806.1| flagellar basal-body rod protein FlgC [Burkholderia cenocepacia
           MC0-3]
          Length = 132

 Score = 96.1 bits (237), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 36/131 (27%), Positives = 61/131 (46%), Gaps = 1/131 (0%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
                 + IA S L+ Q+ R+  I+ N+ANA  T  T  +    RK +      +G   V
Sbjct: 1   MSFKDISQIAGSALSAQTVRLNTIASNLANA-GTSGTEETAYRARKPVFASVFQNGGARV 59

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
           +V  +           +PGHP+A+ +G+V Y NV+ + E ADM   +R +  N++ + + 
Sbjct: 60  QVLDVIATDDALAARHEPGHPLADENGMVFYSNVSAVEEMADMMAASRAFSTNVEVLTRI 119

Query: 122 HDMMTTTLDLL 132
             M    L + 
Sbjct: 120 KGMQQDLLRMG 130


>gi|208435438|ref|YP_002267104.1| flagellar basal-body rod protein [Helicobacter pylori G27]
 gi|308183713|ref|YP_003927840.1| flagellar basal body rod protein FlgC [Helicobacter pylori PeCan4]
 gi|208433367|gb|ACI28238.1| flagellar basal-body rod protein [Helicobacter pylori G27]
 gi|308065898|gb|ADO07790.1| flagellar basal body rod protein FlgC [Helicobacter pylori PeCan4]
          Length = 161

 Score = 96.1 bits (237), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 48/159 (30%), Positives = 71/159 (44%), Gaps = 29/159 (18%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF------------ 51
            ++S  I+  GL+ Q  R  +IS NIANA TT  + G    R++ +              
Sbjct: 2   FLSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGGPYRRQEAVFRAFDFNEILNQKI 61

Query: 52  -----------------EEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPN 94
                            +  +     V V KI  D S  + ++DP HP ANA G V YPN
Sbjct: 62  AQNNQITPYEDPLDEGDDNPLIPITSVVVDKIVRDDSEPLMKYDPSHPDANAQGYVAYPN 121

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           VN +VE AD+ E  R Y AN+   + + +M    + +L+
Sbjct: 122 VNAVVEMADLVEATRAYQANVAAFQSAKNMAQNAIGMLQ 160


>gi|94264091|ref|ZP_01287890.1| Flagellar basal-body rod protein FlgC [delta proteobacterium
           MLMS-1]
 gi|93455507|gb|EAT05697.1| Flagellar basal-body rod protein FlgC [delta proteobacterium
           MLMS-1]
          Length = 144

 Score = 96.1 bits (237), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 38/144 (26%), Positives = 65/144 (45%), Gaps = 12/144 (8%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             ++ + +I+ S L  + +R+ I S N+ANA TT    G     +  +     +      
Sbjct: 1   MDILTAMNISGSALKAERSRLNIASMNMANANTTRTVEGGPYRAKSVVFEARPLERDFNT 60

Query: 62  ------------RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNR 109
                        V ++  D++ F E ++P HP A+ +GIV+YPNVN   +  DM    R
Sbjct: 61  TLQGAASRLRKVEVAEVVEDRAPFREVYEPHHPDADENGIVRYPNVNTAEQMVDMMNARR 120

Query: 110 LYMANLQTIKQSHDMMTTTLDLLR 133
            Y AN+  +    +M    L++ R
Sbjct: 121 SYEANVAALDAVKEMALRALEISR 144


>gi|320107020|ref|YP_004182610.1| flagellar basal-body rod protein FlgC [Terriglobus saanensis
           SP1PR4]
 gi|319925541|gb|ADV82616.1| flagellar basal-body rod protein FlgC [Terriglobus saanensis
           SP1PR4]
          Length = 152

 Score = 95.7 bits (236), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 39/152 (25%), Positives = 62/152 (40%), Gaps = 20/152 (13%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG---- 57
             L     I+ S L  Q  R ++++ N+ANA TT    G    R+  +            
Sbjct: 1   MNLFGMMDISASALHAQRVRAEVVATNMANAETTRTADGGAYSRKHVLLASAESGNTFSS 60

Query: 58  ----------------SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVET 101
                            GGV V  +  D +  +  +DP HP A+  G V+YP++N L E 
Sbjct: 61  SFRHAGSLLSTPSQTVEGGVDVTSVEGDGAPPIRRYDPSHPDADKDGFVEYPDINPLTEM 120

Query: 102 ADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            D+    R Y  N   ++    M+  +LD+L+
Sbjct: 121 VDLMGATRSYGLNATALQAEKGMVVASLDILK 152


>gi|313901523|ref|ZP_07834970.1| flagellar basal-body rod protein FlgC [Thermaerobacter subterraneus
           DSM 13965]
 gi|313468218|gb|EFR63685.1| flagellar basal-body rod protein FlgC [Thermaerobacter subterraneus
           DSM 13965]
          Length = 188

 Score = 95.7 bits (236), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 40/184 (21%), Positives = 61/184 (33%), Gaps = 53/184 (28%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS---- 58
            + ++  IA SG+  Q  R+ +I+ N+AN  +T    G    R   +  E     +    
Sbjct: 4   GMFSTFDIAASGMTAQRLRLDLIASNLANVDSTRTPQGGPYRRLVPVFEERATPFARILR 63

Query: 59  -------------------------------------------------GGVRVKKIGVD 69
                                                            GGV+V  +  D
Sbjct: 64  ERGAVPGPVPAAGAAAGWARSPLAGVAGGPVPPVAGPGAAGPGGTGAAPGGVQVAAVVGD 123

Query: 70  QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
            S     +DP HP A   G V YPNV+ L E  ++    R Y AN+     +  +    L
Sbjct: 124 PSPPRLVYDPAHPDAGPDGYVAYPNVDPLAEMVNLLAATRAYEANVAVFAAARTLALRAL 183

Query: 130 DLLR 133
           D+ R
Sbjct: 184 DIGR 187


>gi|120597303|ref|YP_961877.1| flagellar basal-body rod protein FlgC [Shewanella sp. W3-18-1]
 gi|146294552|ref|YP_001184976.1| flagellar basal-body rod protein FlgC [Shewanella putrefaciens
           CN-32]
 gi|120557396|gb|ABM23323.1| flagellar basal-body rod protein FlgC [Shewanella sp. W3-18-1]
 gi|145566242|gb|ABP77177.1| flagellar basal-body rod protein FlgC [Shewanella putrefaciens
           CN-32]
          Length = 138

 Score = 95.7 bits (236), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 35/136 (25%), Positives = 57/136 (41%), Gaps = 5/136 (3%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG- 60
                   IA +G+  Q+ R+  ++ N+ANA    +TP S     K +          G 
Sbjct: 1   MSFGDIYQIAGAGMNAQTIRLNTVASNLANAGAAAETPESAYRALKPVFATIYDSTQQGA 60

Query: 61  ----VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
               + V  I    +     ++P HP AN  G V Y NVN + E ADM   +R +  +++
Sbjct: 61  IGASIEVSDIVQADAPLDMRYEPNHPFANEQGYVAYSNVNTIEEMADMMAASRSFETSVE 120

Query: 117 TIKQSHDMMTTTLDLL 132
            + ++  M    L L 
Sbjct: 121 VMNRARSMQQGLLQLG 136


>gi|242309757|ref|ZP_04808912.1| flagellar basal body rod protein FlgC [Helicobacter pullorum MIT
           98-5489]
 gi|239523758|gb|EEQ63624.1| flagellar basal body rod protein FlgC [Helicobacter pullorum MIT
           98-5489]
          Length = 166

 Score = 95.7 bits (236), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 47/164 (28%), Positives = 69/164 (42%), Gaps = 34/164 (20%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKT--------------- 48
            ++S  I+  GL+ Q  R+ +IS NIANA TT    G    RR+                
Sbjct: 2   FLSSFDISGYGLSAQRQRVNLISSNIANANTTRTDEGGPYRRRELILKAFNFDKVLNQKY 61

Query: 49  -------------------ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGI 89
                                  E       V V KI  D S    +++P HP AN+ G 
Sbjct: 62  ENSNNLLKYEDPLDEMDSFDEQREPKPTLMSVYVDKIVRDDSQPKMKYEPSHPDANSEGY 121

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           V YPN+N +VE AD+ E  + Y AN+   + + +M TT + + +
Sbjct: 122 VAYPNINPVVEMADLIEATKAYQANVAAFQSAKNMATTAISMFQ 165


>gi|88704308|ref|ZP_01102022.1| flagellar basal body rod protein FlgC [Congregibacter litoralis
           KT71]
 gi|88701359|gb|EAQ98464.1| flagellar basal body rod protein FlgC [Congregibacter litoralis
           KT71]
          Length = 140

 Score = 95.7 bits (236), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 37/140 (26%), Positives = 62/140 (44%), Gaps = 8/140 (5%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV------- 54
             L  +  +A + L  QS R+  IS N+ANA     +       +  +    +       
Sbjct: 1   MSLFDAISVAATSLDAQSTRLNTISSNLANANAVSSSAEETYRAQYPVFETMLNELSSAN 60

Query: 55  -MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
            M    GVRV  I       V+E+ P HP+A+  G +  P +N + E A+M E +R Y  
Sbjct: 61  GMDAVAGVRVSGITQSDLPAVKEYVPTHPMADDEGFIYRPAINSVEEMANMMEASRSYQD 120

Query: 114 NLQTIKQSHDMMTTTLDLLR 133
           +++ +  +  ++  TL L R
Sbjct: 121 SIEAMNTAKQLILRTLTLGR 140


>gi|28900120|ref|NP_799775.1| flagellar basal body rod protein FlgC [Vibrio parahaemolyticus RIMD
           2210633]
 gi|153837089|ref|ZP_01989756.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus
           AQ3810]
 gi|260365770|ref|ZP_05778266.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus
           K5030]
 gi|260880692|ref|ZP_05893047.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus
           AN-5034]
 gi|260897702|ref|ZP_05906198.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus
           Peru-466]
 gi|260899387|ref|ZP_05907782.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus
           AQ4037]
 gi|1272366|gb|AAA97474.1| LfgC [Vibrio parahaemolyticus]
 gi|28808403|dbj|BAC61608.1| LfgC [Vibrio parahaemolyticus RIMD 2210633]
 gi|149749677|gb|EDM60422.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus
           AQ3810]
 gi|308086219|gb|EFO35914.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus
           Peru-466]
 gi|308092577|gb|EFO42272.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus
           AN-5034]
 gi|308109204|gb|EFO46744.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus
           AQ4037]
 gi|308114992|gb|EFO52532.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus
           K5030]
 gi|328470099|gb|EGF41010.1| flagellar basal body rod protein FlgC [Vibrio parahaemolyticus
           10329]
          Length = 144

 Score = 95.7 bits (236), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 32/142 (22%), Positives = 62/142 (43%), Gaps = 10/142 (7%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDP----------YRRKTISF 51
                   I  S +  Q+ R+  ++ N+ANA      P              Y++  ++ 
Sbjct: 1   MSFTDIYSITGSAMTAQTVRLNTVASNLANADAVSANPDDAYKALKPVFATVYQKTQMTT 60

Query: 52  EEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
           E  ++ +  VR+  +  ++    + F+P +P+AN  G V YP+++V+ E ADM    R +
Sbjct: 61  ENGIYPNAEVRIVDVVQNKGQAEKRFEPNNPLANGEGYVYYPDIDVVAEMADMMSATRSF 120

Query: 112 MANLQTIKQSHDMMTTTLDLLR 133
             N++ +     M    L L +
Sbjct: 121 ETNVEVLANVKSMQQGLLRLGQ 142


>gi|261341496|ref|ZP_05969354.1| flagellar basal-body rod protein FlgC [Enterobacter cancerogenus
           ATCC 35316]
 gi|288316292|gb|EFC55230.1| flagellar basal-body rod protein FlgC [Enterobacter cancerogenus
           ATCC 35316]
          Length = 141

 Score = 95.3 bits (235), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 36/139 (25%), Positives = 62/139 (44%), Gaps = 8/139 (5%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--- 58
                   ++ S +  Q+ R+  I+ N+ANA T     G+    R+ +      +     
Sbjct: 1   MAFSDIYRVSGSAMTAQTVRLNTIASNLANAETPAVDEGNVYKARRPVFAAVYQNDELMS 60

Query: 59  ----GGVRVKKI-GVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
                G RV+ +  V+    V+ ++P HP+AN  G V YP++NV+ E ADM   +R +  
Sbjct: 61  DKALSGARVQVLDVVESGNAVQRYEPHHPMANPDGYVWYPDINVVEEMADMMSASRNFET 120

Query: 114 NLQTIKQSHDMMTTTLDLL 132
           N+  +     M  + L L 
Sbjct: 121 NVDVLNNVKSMQQSLLRLG 139


>gi|77918798|ref|YP_356613.1| flagellar basal-body rod protein FlgC [Pelobacter carbinolicus DSM
           2380]
 gi|77544881|gb|ABA88443.1| flagellar basal-body rod protein FlgC [Pelobacter carbinolicus DSM
           2380]
          Length = 143

 Score = 95.3 bits (235), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 41/143 (28%), Positives = 66/143 (46%), Gaps = 11/143 (7%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF---------- 51
             +  +  ++ S L+ Q  R+ +IS N+AN  TT    G    +R  +            
Sbjct: 1   MDIFTAMQVSASALSAQRTRLNVISGNLANVGTTRTPEGGPYRKRDVVFQSSQNMFEDHL 60

Query: 52  -EEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRL 110
            + +     GV V +I  +   F   + PGHP A+ +G++  PN+NV+ E  DM    R 
Sbjct: 61  QQAMDTNVQGVEVSRIQPNSRDFRTVYQPGHPDADENGMLTLPNINVMEEVVDMMTAMRS 120

Query: 111 YMANLQTIKQSHDMMTTTLDLLR 133
           Y AN+  IK +  M T  L++ R
Sbjct: 121 YEANISAIKSAQRMATKALEIGR 143


>gi|251797447|ref|YP_003012178.1| flagellar basal-body rod protein FlgC [Paenibacillus sp. JDR-2]
 gi|247545073|gb|ACT02092.1| flagellar basal-body rod protein FlgC [Paenibacillus sp. JDR-2]
          Length = 151

 Score = 95.3 bits (235), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 47/138 (34%), Positives = 63/138 (45%), Gaps = 19/138 (13%)

Query: 15  LAVQSARMQIISENIANARTTGD---TPGSDPYRRKTISFEEVMHGSG------------ 59
           L  Q  RM +IS NIANA TT          PY+RK +  E +   S             
Sbjct: 14  LTAQRLRMDVISSNIANAETTRAGYVNGQFVPYKRKMVVLEPMTQNSSFSDLLNKQLEGT 73

Query: 60  ----GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
               GV+  +I  DQS     ++P HP A+A G V  PNV+V  E  DM   +R Y AN+
Sbjct: 74  SGAQGVKATRIIEDQSPTKLVYNPTHPDADADGYVHMPNVDVAKEMVDMISASRSYEANV 133

Query: 116 QTIKQSHDMMTTTLDLLR 133
             +  S  M T  L++ +
Sbjct: 134 TALNASKAMFTKALEIGK 151


>gi|167567748|ref|ZP_02360664.1| flagellar basal-body rod protein FlgC [Burkholderia oklahomensis
           EO147]
 gi|167574699|ref|ZP_02367573.1| flagellar basal-body rod protein FlgC [Burkholderia oklahomensis
           C6786]
          Length = 138

 Score = 95.3 bits (235), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 39/138 (28%), Positives = 61/138 (44%), Gaps = 6/138 (4%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
                 A IA S +A Q+ R+  I+ N+ANA     T  S    RK +       G+ G 
Sbjct: 1   MSFKDIAQIAGSAMAAQTVRLNTIASNLANADAASSTEASTYRARKPVFASIFKVGADGE 60

Query: 62  ------RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
                 +V  +        +   PG+P+A+A G V YPNV+ + E  DM  + R Y  N+
Sbjct: 61  VNGAAVQVLDVVQSTEPLRKVHQPGNPLADADGNVLYPNVDPVEEMTDMLSSTRAYSTNV 120

Query: 116 QTIKQSHDMMTTTLDLLR 133
           + + + + M    L L +
Sbjct: 121 EVLGRVNGMQMELLKLGQ 138


>gi|224370789|ref|YP_002604953.1| FlgC [Desulfobacterium autotrophicum HRM2]
 gi|223693506|gb|ACN16789.1| FlgC [Desulfobacterium autotrophicum HRM2]
          Length = 165

 Score = 95.3 bits (235), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 43/165 (26%), Positives = 67/165 (40%), Gaps = 33/165 (20%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG---- 57
             L+ S  I+ +GLA    +M +I+EN+AN  TT    G    R+  +  ++ +      
Sbjct: 1   MDLLDSMKISATGLAAHRTKMNVIAENLANVDTTRTADGGPYRRKMVVFKDQALENFKSV 60

Query: 58  ----------------------------SGGVRVKKIGVDQSTFVEEFDPGHPVANA-SG 88
                                         GV V +I   Q  F   ++P HP A+  +G
Sbjct: 61  LEKNQQTNQVAQVEFSPIEVGKNDPQSRGTGVAVDEIVQSQEDFRLVYNPAHPDADPVTG 120

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            V  PNV+ L E ADM    R Y A++  I  +  M+   L+L +
Sbjct: 121 YVAMPNVDHLTEVADMIVAKRSYEASITAISNTKSMILKALELGK 165


>gi|89895737|ref|YP_519224.1| hypothetical protein DSY2991 [Desulfitobacterium hafniense Y51]
 gi|89335185|dbj|BAE84780.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 176

 Score = 94.9 bits (234), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 47/175 (26%), Positives = 68/175 (38%), Gaps = 43/175 (24%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTP-----GSDPYRRKTISFEEVMH 56
             +  S  I+ SGL  Q  R+ +IS NIAN  TT            PY+R+ + F+    
Sbjct: 1   MGIFGSMDISASGLTAQRLRLDVISNNIANINTTRTGQLTEGGNQIPYQRQVVVFKARGT 60

Query: 57  GSG-------------------------------GVRVKKIGVDQSTFVEEFDPGHPVAN 85
            S                                GV V+ I  D   F  E++P  P A 
Sbjct: 61  ESSFAETLNQALQGRSVSTTALLQGQTTLGTTGNGVEVQAIAEDTLPFRLEYNPDSPDAA 120

Query: 86  ASG-------IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            +         V+ PNVN++ E  DM   +R Y AN+  +  S  MMT  L++ +
Sbjct: 121 QTTEDGIPAGYVRMPNVNIVTEMVDMISASRAYEANVTALNASKAMMTKALEIGK 175


>gi|149189834|ref|ZP_01868114.1| flagellar basal body rod protein [Vibrio shilonii AK1]
 gi|148836320|gb|EDL53277.1| flagellar basal body rod protein [Vibrio shilonii AK1]
          Length = 144

 Score = 94.9 bits (234), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 33/141 (23%), Positives = 54/141 (38%), Gaps = 10/141 (7%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH----- 56
                   IA S +  Q+ R+  ++ N+ANA      P       K +            
Sbjct: 1   MSFTDIYSIAGSAMTAQTVRLNTVASNLANADAVSANPDDAYKALKPVFATVYSQTQLAA 60

Query: 57  -----GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
                 +  VR+  +    +   + F+P +P+AN  G V YP V+V+ E ADM    R +
Sbjct: 61  GQNVYPNAEVRIVDVVQSDAKADQRFEPNNPLANEEGYVYYPGVDVVAEMADMMSATRSF 120

Query: 112 MANLQTIKQSHDMMTTTLDLL 132
             N++ +     M    L L 
Sbjct: 121 ETNVEVLANVKSMQQGLLRLG 141


>gi|206896029|ref|YP_002246681.1| flagellar basal-body rod protein FlgC [Coprothermobacter
           proteolyticus DSM 5265]
 gi|206738646|gb|ACI17724.1| flagellar basal-body rod protein FlgC [Coprothermobacter
           proteolyticus DSM 5265]
          Length = 134

 Score = 94.9 bits (234), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 35/131 (26%), Positives = 60/131 (45%), Gaps = 2/131 (1%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
            +   IA S L  Q  RM +IS NIAN  TT    G   +R+       ++  + G  VK
Sbjct: 4   FSLLRIAGSALTAQRFRMDVISSNIANLETTRTPEGGPYHRKIVSFQSMMVGENQGQGVK 63

Query: 65  KIGVDQSTF-VEEFDPGHPVANASG-IVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
              + +       +DP HP A+    +V YP+++++ E  D+    R +  N   I  + 
Sbjct: 64  VAQLTEDPSERLVYDPSHPDADPETGMVHYPDMDLITELTDLMSAQRSFEMNSNAIAIAR 123

Query: 123 DMMTTTLDLLR 133
            + T ++++ R
Sbjct: 124 QVYTKSMEIGR 134


>gi|90415320|ref|ZP_01223254.1| flagellar basal-body rod protein FlgC [marine gamma proteobacterium
           HTCC2207]
 gi|90332643|gb|EAS47813.1| flagellar basal-body rod protein FlgC [marine gamma proteobacterium
           HTCC2207]
          Length = 141

 Score = 94.9 bits (234), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 35/140 (25%), Positives = 61/140 (43%), Gaps = 8/140 (5%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--- 58
             +     IA S +  Q  RM   + N+ANA T   +       ++ +    +       
Sbjct: 1   MSISNIFGIAASAMNAQMVRMNSTASNMANAGTVSSSAEDAFKAKRPVFQALLQEHQLDQ 60

Query: 59  -----GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
                GGV+V  +  D +   +  DPG+P+A+  G V   NVN + E  +M    R Y  
Sbjct: 61  GSQFLGGVKVLDMVDDTAPNKKMHDPGNPLADKDGFVFSSNVNEVTEMVEMMGAARSYQN 120

Query: 114 NLQTIKQSHDMMTTTLDLLR 133
           N++ +  + ++M  TLD+ +
Sbjct: 121 NVEVVNTARELMMRTLDITK 140


>gi|269796400|ref|YP_003315855.1| flagellar basal-body rod protein FlgC [Sanguibacter keddieii DSM
           10542]
 gi|269098585|gb|ACZ23021.1| flagellar basal-body rod protein FlgC [Sanguibacter keddieii DSM
           10542]
          Length = 134

 Score = 94.9 bits (234), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 33/131 (25%), Positives = 58/131 (44%), Gaps = 1/131 (0%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI-SFEEVMHGSGGVRV 63
             +  IA++G+ V    +  +S+N+AN  T   +  +    R  + S         GV+V
Sbjct: 4   FGAIGIASTGMTVNRKWLDAVSDNLANINTVRPSDEAAFQARYVVASAVGYPENGQGVQV 63

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
             I +  +      +P HP+A+A G VKYP V++  + + M    R Y AN   + ++  
Sbjct: 64  AGIELGSAEGRMVHEPDHPLADAEGYVKYPEVDMAGQMSQMIMAQRGYQANASVVDRAKA 123

Query: 124 MMTTTLDLLRD 134
                L + R 
Sbjct: 124 TYEAALQIGRS 134


>gi|153831731|ref|ZP_01984398.1| flagellar basal-body rod protein FlgC [Vibrio harveyi HY01]
 gi|156976139|ref|YP_001447045.1| flagellar basal body rod protein FlgC [Vibrio harveyi ATCC
           BAA-1116]
 gi|269960114|ref|ZP_06174490.1| Flagellar basal-body rod protein C [Vibrio harveyi 1DA3]
 gi|148872241|gb|EDL71058.1| flagellar basal-body rod protein FlgC [Vibrio harveyi HY01]
 gi|156527733|gb|ABU72818.1| hypothetical protein VIBHAR_04910 [Vibrio harveyi ATCC BAA-1116]
 gi|269835085|gb|EEZ89168.1| Flagellar basal-body rod protein C [Vibrio harveyi 1DA3]
          Length = 144

 Score = 94.9 bits (234), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 32/142 (22%), Positives = 61/142 (42%), Gaps = 10/142 (7%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDP----------YRRKTISF 51
                   I  S +  Q+ R+  ++ N+ANA      P              Y++  ++ 
Sbjct: 1   MSFTDIYSITGSAMTAQTVRLNTVASNLANADAVSANPDDAYKALKPVFATVYQKTQMAT 60

Query: 52  EEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
           E  ++ +  VR+  +  +     + F+P +P+AN  G V YP+++V+ E ADM    R +
Sbjct: 61  ENGVYPNAEVRIVDVVQNAGQAEKRFEPNNPLANDEGYVYYPDIDVVSEMADMMSATRSF 120

Query: 112 MANLQTIKQSHDMMTTTLDLLR 133
             N++ +     M    L L +
Sbjct: 121 ETNVEVLTNVKSMQQGLLRLGQ 142


>gi|167725928|ref|ZP_02409164.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           DM98]
 gi|167905088|ref|ZP_02492293.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           NCTC 13177]
          Length = 125

 Score = 94.9 bits (234), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 34/125 (27%), Positives = 57/125 (45%), Gaps = 6/125 (4%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV------RVKKIGV 68
           ++ Q+ R+  I+ N+ANA +   T  +    RK +        + G       +V  +  
Sbjct: 1   MSAQTVRLNTIASNLANADSASGTEDATYRARKPVFASIFQLDAQGEPRGAAVQVLDVVK 60

Query: 69  DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
                 +   PGHP+A+A G V YPNVN + E  DM   +R Y  N++ + + + M    
Sbjct: 61  STEPLRKVHQPGHPLADAEGNVLYPNVNPVEEMTDMLSASRAYSTNVEVLGRVNGMQLEL 120

Query: 129 LDLLR 133
           L L +
Sbjct: 121 LKLGQ 125


>gi|58582193|ref|YP_201209.1| flagellar basal body rod protein FlgC [Xanthomonas oryzae pv.
           oryzae KACC10331]
 gi|58426787|gb|AAW75824.1| flagellar biosynthesis cell-proximal portion of basal-body rod
           [Xanthomonas oryzae pv. oryzae KACC10331]
          Length = 127

 Score = 94.9 bits (234), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 33/126 (26%), Positives = 61/126 (48%), Gaps = 3/126 (2%)

Query: 11  ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS---GGVRVKKIG 67
           A S L  QS R+  I+ N+ANA +   +  +     + I   +          V VK+I 
Sbjct: 2   AGSALHAQSVRLSTIASNLANADSVAGSAEATYKPIEPIFQAQQSRQDPSLTSVNVKEIT 61

Query: 68  VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
              +  +  ++PGHP+A+A G V  P+V+ + +  +M   +R Y A ++ +  + ++   
Sbjct: 62  TTNAPPIRRYEPGHPLADADGYVFSPDVDPVSQMVNMISASRNYQAGVEMLNTAKELALA 121

Query: 128 TLDLLR 133
           TL + R
Sbjct: 122 TLTMGR 127


>gi|325288776|ref|YP_004264957.1| flagellar basal-body rod protein FlgC [Syntrophobotulus glycolicus
           DSM 8271]
 gi|324964177|gb|ADY54956.1| flagellar basal-body rod protein FlgC [Syntrophobotulus glycolicus
           DSM 8271]
          Length = 160

 Score = 94.9 bits (234), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 47/159 (29%), Positives = 65/159 (40%), Gaps = 27/159 (16%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTP-----GSDPYRRKTISFEEVMH 56
             L +   I+ SGL  Q  RM +IS NIAN  T             PYRR+   F     
Sbjct: 1   MSLFSGMDISASGLTAQRLRMDLISSNIANMNTNHTEATTAAGNPIPYRRQMAVFSTRNS 60

Query: 57  GS---------------GGVRVKKIGVDQSTFVEEFDPGHPVA-------NASGIVKYPN 94
            +                GV V +I  D+S F  E+DP  P A          G V++PN
Sbjct: 61  PNDFLSAFRSAGESEVGQGVSVTQILEDESPFKMEYDPESPEAAKVAEEGVPVGYVRHPN 120

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           VN++ E  DM   +R Y AN+     S  +    L++ +
Sbjct: 121 VNIVQEMIDMLSASRSYEANVTAFNASKAIAAKALEIGK 159


>gi|15612531|ref|NP_224184.1| flagellar basal body rod protein FlgC [Helicobacter pylori J99]
 gi|4156087|gb|AAD07040.1| FLAGELLAR BASAL-BODY ROD PROTEIN [Helicobacter pylori J99]
          Length = 161

 Score = 94.9 bits (234), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 48/159 (30%), Positives = 71/159 (44%), Gaps = 29/159 (18%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF------------ 51
            ++S  I+  GL+ Q  R  +IS NIANA TT  + G    R++ +              
Sbjct: 2   FLSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGGPYRRQEAVFRAFDFNEILNQKI 61

Query: 52  -----------------EEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPN 94
                            +  +     V V KI  D S  + ++DP HP ANA G V YPN
Sbjct: 62  AQNNQIIPYEDPLDEGDDNPLIPITSVVVDKIARDDSEPLMKYDPSHPDANAQGYVAYPN 121

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           VN +VE AD+ E  R Y AN+   + + +M    + +L+
Sbjct: 122 VNAVVEMADLVEATRAYQANVAAFQSAKNMAQNAIGMLQ 160


>gi|304392508|ref|ZP_07374448.1| flagellar basal-body rod protein FlgC [Ahrensia sp. R2A130]
 gi|303295138|gb|EFL89498.1| flagellar basal-body rod protein FlgC [Ahrensia sp. R2A130]
          Length = 138

 Score = 94.9 bits (234), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 70/136 (51%), Positives = 96/136 (70%), Gaps = 3/136 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD L A+  +A+SGLA QS R++++S+NIANA++T    G +PY+RKTI+F   +  +  
Sbjct: 1   MDALSAAMKVASSGLAAQSQRLEVVSQNIANAQSTSRVAGGEPYQRKTITFTSALDQANA 60

Query: 61  VR---VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
            +   V KIG D S+F  +FDP  P A+A G+VK PNVNVLVE ADMR+ NR Y +NLQ 
Sbjct: 61  AQMVDVDKIGRDPSSFSAKFDPSSPGADAKGMVKMPNVNVLVEMADMRDANRAYESNLQV 120

Query: 118 IKQSHDMMTTTLDLLR 133
           +KQ  DM+T T+DL+R
Sbjct: 121 MKQVQDMVTATIDLMR 136


>gi|149191151|ref|ZP_01869409.1| flagellar basal-body rod protein C [Vibrio shilonii AK1]
 gi|148834989|gb|EDL51968.1| flagellar basal-body rod protein C [Vibrio shilonii AK1]
          Length = 142

 Score = 94.6 bits (233), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 33/142 (23%), Positives = 57/142 (40%), Gaps = 9/142 (6%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
              +     A S ++ Q+ R+  IS N+ANA +    P       K I      H +   
Sbjct: 1   MSFLGIYETAGSAMSAQTVRLNTISSNLANADSVSGDPSKVYKPLKPIFSAVYNHFNAQE 60

Query: 62  ---------RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
                    R+  +    S     ++P +P++N  G V Y  +NV+ E ADM    R + 
Sbjct: 61  TQHQGVVPIRIADVVEVSSMMEGRYEPNNPLSNDEGYVYYSGINVVNEMADMISATRSFE 120

Query: 113 ANLQTIKQSHDMMTTTLDLLRD 134
           A+++ +     M  + + L R 
Sbjct: 121 ASVEVLGNVKSMQQSLMGLWRS 142


>gi|294084420|ref|YP_003551178.1| flagellar basal-body rod protein FlgC [Candidatus Puniceispirillum
           marinum IMCC1322]
 gi|292663993|gb|ADE39094.1| flagellar basal-body rod protein FlgC [Candidatus Puniceispirillum
           marinum IMCC1322]
          Length = 138

 Score = 94.6 bits (233), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 29/138 (21%), Positives = 52/138 (37%), Gaps = 5/138 (3%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG--- 57
           M  +     I+   +A Q  R+  I+ N+ANA     +        K +           
Sbjct: 1   MADIKNVFDISGRAMAAQMVRLNTIASNLANAGNLASSEDEAYRSMKPVFETRFADNVND 60

Query: 58  --SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
                 +V  +          + P HP ++A G V    VNV  E  +M E +R Y  N+
Sbjct: 61  SGMSTTQVVGVTKLSRKPERIYMPDHPKSDAKGFVYSAAVNVEEEFVEMLEASRQYQNNI 120

Query: 116 QTIKQSHDMMTTTLDLLR 133
           + +     +M  T+++ +
Sbjct: 121 EVVTTLRALMMRTINMGK 138


>gi|317014993|gb|ADU82429.1| flagellar basal body rod protein FlgC [Helicobacter pylori
           Gambia94/24]
          Length = 161

 Score = 94.6 bits (233), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 48/159 (30%), Positives = 71/159 (44%), Gaps = 29/159 (18%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF------------ 51
            ++S  I+  GL+ Q  R  +IS NIANA TT  + G    R++ +              
Sbjct: 2   FLSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGGPYRRQEAVFRAFDFNEILNQKI 61

Query: 52  -----------------EEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPN 94
                            +  +     V V KI  D S  + ++DP HP ANA G V YPN
Sbjct: 62  AQNNQITPYEDPLDEGDDNPLIPITSVVVDKIARDDSEPLMKYDPSHPDANAQGYVAYPN 121

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           VN +VE AD+ E  R Y AN+   + + +M    + +L+
Sbjct: 122 VNAVVEMADLVEATRAYQANVAAFQSAKNMAQNAIGMLQ 160


>gi|222824065|ref|YP_002575639.1| flagellar proximal rod protein FlgC [Campylobacter lari RM2100]
 gi|222539287|gb|ACM64388.1| flagellar proximal rod protein FlgC [Campylobacter lari RM2100]
          Length = 164

 Score = 94.6 bits (233), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 50/164 (30%), Positives = 69/164 (42%), Gaps = 32/164 (19%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRK------------- 47
           M YL     I+  GL+ Q  RM +IS NIANA TT    G    RR+             
Sbjct: 1   MAYLSD-FDISGYGLSAQRFRMNVISSNIANANTTRTAEGGPYRRREVIFKATDFNELLN 59

Query: 48  ------------------TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGI 89
                               S ++       V V K+  D   F  ++DP HP AN  G 
Sbjct: 60  KQITKDNNFLEYENPLNDPASQKDAKPAIMSVVVDKVVRDDKDFRMKYDPSHPDANEQGY 119

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           V +PN+N ++E AD+ E  R Y AN+     +  +  + +DLLR
Sbjct: 120 VAFPNINPVIEMADLIEATRAYQANVSAFTSTKTIAQSAIDLLR 163


>gi|329898291|ref|ZP_08272374.1| Flagellar basal-body rod protein FlgC [gamma proteobacterium
           IMCC3088]
 gi|328920856|gb|EGG28299.1| Flagellar basal-body rod protein FlgC [gamma proteobacterium
           IMCC3088]
          Length = 141

 Score = 94.6 bits (233), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 36/140 (25%), Positives = 59/140 (42%), Gaps = 8/140 (5%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             L     IA S LA Q+ R+   + N+ANA     T       ++ +    +     G 
Sbjct: 1   MGLTDIFDIAGSALAGQTTRLHATASNMANASNVSSTAEDAYKAKRVVFRTVLEDQIIGN 60

Query: 62  R--------VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
                    V  +  D S   + +DP +P+A+  G V   NV  + E  +M    R Y  
Sbjct: 61  VRRPAGSLLVDGVKDDPSPHRKLYDPSNPLADEDGYVYQSNVEEVEEVVEMLAAARSYQN 120

Query: 114 NLQTIKQSHDMMTTTLDLLR 133
           N++ I  +  +MT TL++L+
Sbjct: 121 NVEVINTAKQLMTRTLEVLK 140


>gi|283782090|ref|YP_003372845.1| flagellar basal-body rod protein FlgC [Pirellula staleyi DSM 6068]
 gi|283440543|gb|ADB18985.1| flagellar basal-body rod protein FlgC [Pirellula staleyi DSM 6068]
          Length = 141

 Score = 94.6 bits (233), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 37/140 (26%), Positives = 55/140 (39%), Gaps = 11/140 (7%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIAN-------ARTTGDTPGSDPYRRKTISFEEVMH 56
           +  +  I+ S L  Q  R+  IS N+AN       A            R +        H
Sbjct: 1   MHTALDISTSALVAQRIRLDTISSNLANMTSLERDASGEMKPYEGKYVRFEADPELATRH 60

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVA----NASGIVKYPNVNVLVETADMRETNRLYM 112
           G+ GV+V  I  +    +  + P HP A       G V YP +N   E  D     R Y 
Sbjct: 61  GAVGVKVSSIETETVEPLYRWQPDHPYAIKEGPRKGYVAYPRINQTAEFVDALVATRAYE 120

Query: 113 ANLQTIKQSHDMMTTTLDLL 132
           AN+  ++ + +M   TL +L
Sbjct: 121 ANVGVMEITKNMSQQTLRIL 140


>gi|145297453|ref|YP_001140294.1| flagellar basal body rod protein FlgC [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|142850225|gb|ABO88546.1| lateral flagellar basal body rod protein, LfgC [Aeromonas
           salmonicida subsp. salmonicida A449]
          Length = 141

 Score = 94.6 bits (233), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 30/139 (21%), Positives = 57/139 (41%), Gaps = 7/139 (5%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH----- 56
                   IA S +  Q+ R+  ++ N+AN  +   +  +     K +            
Sbjct: 1   MSFNRIYDIAGSAMRAQTVRLDTVASNLANVDSAAGSEDAAFRAIKPVFSTLYQRVQDAD 60

Query: 57  --GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
             G+  V++  I        +  +P +P+A+  G V Y NVN + E ADM   +R +  +
Sbjct: 61  SLGAAQVQIAGIVQSDRQVDKRLEPTNPLADQDGFVYYSNVNAVEEMADMMSASRGFETS 120

Query: 115 LQTIKQSHDMMTTTLDLLR 133
           ++ I + + M    L L +
Sbjct: 121 VEVINRINSMQQGLLRLGQ 139


>gi|163803167|ref|ZP_02197050.1| flagellar basal-body rod protein C [Vibrio sp. AND4]
 gi|159173067|gb|EDP57900.1| flagellar basal-body rod protein C [Vibrio sp. AND4]
          Length = 144

 Score = 94.6 bits (233), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 31/142 (21%), Positives = 60/142 (42%), Gaps = 10/142 (7%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDP----------YRRKTISF 51
                   I  S +  Q+ R+  ++ N+ANA      P              Y++  ++ 
Sbjct: 1   MSFTDIYSITGSAMTAQTVRLNTVASNLANADAVSANPDDAYKALKPVFATVYQKTQMTT 60

Query: 52  EEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
           +  ++ +  VR+  +        + F+P +P+AN  G V YP+++V+ E ADM    R +
Sbjct: 61  DNGVYPNAEVRIVDVVQSAGQAEQRFEPNNPLANNQGYVYYPDIDVVSEMADMMSATRSF 120

Query: 112 MANLQTIKQSHDMMTTTLDLLR 133
             N++ +     M    L L +
Sbjct: 121 ETNVEVLTNVKSMQQGLLRLGQ 142


>gi|237751239|ref|ZP_04581719.1| flagellar basal body rod protein FlgC [Helicobacter bilis ATCC
           43879]
 gi|229372605|gb|EEO22996.1| flagellar basal body rod protein FlgC [Helicobacter bilis ATCC
           43879]
          Length = 163

 Score = 94.2 bits (232), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 44/161 (27%), Positives = 72/161 (44%), Gaps = 31/161 (19%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF------------ 51
            +++  I+  GL+ Q  R+ +IS NIANA TT    G    R++ +              
Sbjct: 2   FMSTFDISGYGLSAQRVRVNVISANIANANTTRTDEGGPYRRQEVVFRAFDFNKQLNKRL 61

Query: 52  -------------------EEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKY 92
                              ++ +     V + KI  D +  + ++DP HP ANA G V Y
Sbjct: 62  AKDNNLVEYKDPLEEGAYGKKPVPPITSVYIDKIVRDDNKPLMKYDPTHPDANAQGYVAY 121

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           PNVN +VE AD+ E  R Y AN+   + + +M +  + + +
Sbjct: 122 PNVNPVVEMADLVEATRAYQANVAAFQSAKNMASNAITMFQ 162


>gi|157165285|ref|YP_001467064.1| flagellar basal body rod protein FlgC [Campylobacter concisus
           13826]
 gi|112800440|gb|EAT97784.1| flagellar basal-body rod protein FlgC [Campylobacter concisus
           13826]
          Length = 166

 Score = 94.2 bits (232), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 47/162 (29%), Positives = 70/162 (43%), Gaps = 32/162 (19%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M YL     I+  GL+ Q  RM +IS NIANA+TT    G    R++ I  E        
Sbjct: 1   MSYL-NDFDISGYGLSAQRFRMNVISSNIANAQTTRTAEGGPYRRQEVIFKEMNFDKILN 59

Query: 61  VR-------------------------------VKKIGVDQSTFVEEFDPGHPVANASGI 89
            +                               V K+  D   F  ++DP HP ANA+G 
Sbjct: 60  DQLKNSQSLLDYENPLDDPSSPKNAHPALTSVIVDKVVRDDKDFQLKYDPSHPDANANGY 119

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           V +PN+N ++E AD+ E  R Y AN+ + + +  +  + + L
Sbjct: 120 VAFPNINPVIEMADLLEATRAYQANVASFQNAKTIAQSAISL 161


>gi|126176158|ref|YP_001052307.1| flagellar basal-body rod protein FlgC [Shewanella baltica OS155]
 gi|304412510|ref|ZP_07394116.1| flagellar basal-body rod protein FlgC [Shewanella baltica OS183]
 gi|307307169|ref|ZP_07586907.1| flagellar basal-body rod protein FlgC [Shewanella baltica BA175]
 gi|125999363|gb|ABN63438.1| flagellar basal-body rod protein FlgC [Shewanella baltica OS155]
 gi|304349152|gb|EFM13564.1| flagellar basal-body rod protein FlgC [Shewanella baltica OS183]
 gi|306910408|gb|EFN40839.1| flagellar basal-body rod protein FlgC [Shewanella baltica BA175]
          Length = 138

 Score = 94.2 bits (232), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 35/136 (25%), Positives = 57/136 (41%), Gaps = 5/136 (3%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG- 60
                   IA +G+  Q+ R+  ++ N+ANA T  + P S     K +          G 
Sbjct: 1   MSFGDIYQIAGAGMNAQTIRLNTVASNLANAGTAAENPESAYRALKPVFATIYDSTQQGA 60

Query: 61  ----VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
               + V  I    +     ++P HP AN  G V Y NVN + E ADM   +R +  +++
Sbjct: 61  IGASIEVSDIVQADAPLDMRYEPNHPFANEQGYVAYSNVNTIEEMADMMAASRSFETSVE 120

Query: 117 TIKQSHDMMTTTLDLL 132
            + ++  M    L L 
Sbjct: 121 IMNRARSMQQGLLQLG 136


>gi|126462486|ref|YP_001043600.1| flagellar basal-body rod protein FlgC [Rhodobacter sphaeroides ATCC
           17029]
 gi|126104150|gb|ABN76828.1| flagellar basal-body rod protein FlgC [Rhodobacter sphaeroides ATCC
           17029]
          Length = 138

 Score = 94.2 bits (232), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 29/138 (21%), Positives = 50/138 (36%), Gaps = 5/138 (3%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG- 59
           M  + +   +    L+ Q  RM  ++ N+ANA T  D   +     + +         G 
Sbjct: 1   MSGIDSVFDVGARALSAQMVRMNTVASNLANAGTVSDKAETAFRPLRPVFETSYADAVGR 60

Query: 60  ----GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
                  V  +          + P HP A+  G V    V+V  E  +M E +R Y   L
Sbjct: 61  TGLSTTDVAGVVSLDREPARVYRPDHPQADPEGYVWEAPVSVDEEMVEMMEASRQYQNTL 120

Query: 116 QTIKQSHDMMTTTLDLLR 133
           + +     +M  T  + +
Sbjct: 121 EAVSTLRSLMARTASMGQ 138


>gi|254496885|ref|ZP_05109733.1| flagellar basal body rod protein FlgC [Legionella drancourtii
           LLAP12]
 gi|254353904|gb|EET12591.1| flagellar basal body rod protein FlgC [Legionella drancourtii
           LLAP12]
          Length = 140

 Score = 94.2 bits (232), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 32/139 (23%), Positives = 61/139 (43%), Gaps = 8/139 (5%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG---- 57
             L +   IA S L  ++AR+   + N++NA             +  I      +     
Sbjct: 1   MSLGSVFDIAGSALTAETARLTTSASNMSNANVESGNVDDVYRVKYPIFKTVQENATQWM 60

Query: 58  ----SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
               + GV++K   V  +  ++ + P +P A+A G +  PNVN + E A++   +R Y  
Sbjct: 61  GDQINAGVQLKGTYVSTADPIKHYQPNNPQADAKGFIYTPNVNYVDEMANVISASRSYQM 120

Query: 114 NLQTIKQSHDMMTTTLDLL 132
           N++ +  +  ++  TL L 
Sbjct: 121 NIELVNNAKQLIQRTLQLG 139


>gi|167614835|ref|ZP_02383470.1| flagellar basal-body rod protein FlgC [Burkholderia thailandensis
           Bt4]
          Length = 125

 Score = 93.8 bits (231), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 34/125 (27%), Positives = 55/125 (44%), Gaps = 6/125 (4%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV------RVKKIGV 68
           ++ Q+ R+  I+ N+ANA        S    RK +        + G       +V  +  
Sbjct: 1   MSAQTVRLNTIASNLANADAASGAEDSTYRARKPVFASIFQLDAQGEPRGAAVQVLDVVK 60

Query: 69  DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
                 +   PGHP+A+A G V YPNVN + E  DM   +R Y  N++ + + + M    
Sbjct: 61  STEPLRKVHQPGHPLADAEGNVLYPNVNPVEEMTDMLSASRAYSTNVEVLGRVNSMQLEL 120

Query: 129 LDLLR 133
           L L +
Sbjct: 121 LKLGQ 125


>gi|332187874|ref|ZP_08389607.1| flagellar basal-body rod protein FlgC [Sphingomonas sp. S17]
 gi|332012035|gb|EGI54107.1| flagellar basal-body rod protein FlgC [Sphingomonas sp. S17]
          Length = 136

 Score = 93.8 bits (231), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 32/131 (24%), Positives = 57/131 (43%), Gaps = 2/131 (1%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG--GVR 62
           ++   ++   ++ Q  RM   + N+ANA     +  +     K +        +G   V 
Sbjct: 6   LSIFQVSGRAMSAQLVRMNTTASNLANAGGIAGSVETAYKTMKPVFRTSFDAATGLSTVD 65

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
           V+KI        +  DP +P+A+  G V    V+   E  DM ET R Y  N++ ++ + 
Sbjct: 66  VEKIVTAGEDPTKRHDPNNPLADKDGNVFEAAVDETRELVDMMETARTYQNNVEVMQTAK 125

Query: 123 DMMTTTLDLLR 133
            ++  TL L R
Sbjct: 126 SLILDTLKLGR 136


>gi|331005439|ref|ZP_08328818.1| Flagellar basal-body rod protein FlgC [gamma proteobacterium
           IMCC1989]
 gi|330420715|gb|EGG95002.1| Flagellar basal-body rod protein FlgC [gamma proteobacterium
           IMCC1989]
          Length = 144

 Score = 93.8 bits (231), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 35/144 (24%), Positives = 63/144 (43%), Gaps = 12/144 (8%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
               +   I+ +G++VQ AR+ +++ N+AN+ TT    G      +    E +   S   
Sbjct: 1   MNYFSIFDISAAGMSVQKARVDVVALNLANSETTKTAAGGPYKPLQVSISEAIGSRSFVD 60

Query: 62  RVKKIGVD------------QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNR 109
            + + G D                     P HP A++ G+V YPN+N   E  ++ E  R
Sbjct: 61  TLNQTGSDLYGSYVSKVSSVSEPIKMVHKPNHPDADSEGMVAYPNINPASEMVNLLEATR 120

Query: 110 LYMANLQTIKQSHDMMTTTLDLLR 133
            Y AN++ +  S  +   TL++ +
Sbjct: 121 AYEANVKALNASISLAQATLEIGK 144


>gi|91224201|ref|ZP_01259464.1| flagellar basal-body rod protein C [Vibrio alginolyticus 12G01]
 gi|91191112|gb|EAS77378.1| flagellar basal-body rod protein C [Vibrio alginolyticus 12G01]
          Length = 144

 Score = 93.8 bits (231), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 32/142 (22%), Positives = 60/142 (42%), Gaps = 10/142 (7%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDP----------YRRKTISF 51
                   I  S +  Q+ R+  ++ N+ANA      P              Y++  ++ 
Sbjct: 1   MSFTDIYSITGSAMTAQTVRLNTVASNLANADAVSANPEDAYKALKPVFATVYQKTQMTT 60

Query: 52  EEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
           E   + +  VR+  +  +     + F+P +P+AN  G V YP+++V+ E ADM    R +
Sbjct: 61  ENGAYPNAEVRIVDVVKNAGDAEKRFEPNNPLANDEGYVFYPDIDVVAEMADMMSATRSF 120

Query: 112 MANLQTIKQSHDMMTTTLDLLR 133
             N++ +     M    L L +
Sbjct: 121 ETNVEVLANVKSMQQGLLRLGQ 142


>gi|74101656|gb|AAZ99746.1| FlgCL [Aeromonas hydrophila]
          Length = 141

 Score = 93.8 bits (231), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 30/139 (21%), Positives = 57/139 (41%), Gaps = 7/139 (5%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH----- 56
                   IA S +  Q+ R+  ++ N+AN  +   +  +     K +            
Sbjct: 1   MSFNRIYDIAGSAMRAQTVRLDTVASNLANVDSAAGSEEAAFRAIKPVFSTLYQRVQDAD 60

Query: 57  --GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
             G+  V++  I        +  +P +P+A+  G V Y NVN + E ADM   +R +  +
Sbjct: 61  SLGAAQVQIAGIVQSDRQVDKRLEPTNPLADQDGFVYYSNVNAVEEMADMMSASRGFETS 120

Query: 115 LQTIKQSHDMMTTTLDLLR 133
           ++ I + + M    L L +
Sbjct: 121 VEVINRINSMQQGLLRLGQ 139


>gi|124516313|gb|EAY57821.1| Flagellar basal-body rod protein FlgC [Leptospirillum rubarum]
          Length = 145

 Score = 93.8 bits (231), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 36/143 (25%), Positives = 58/143 (40%), Gaps = 13/143 (9%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--- 58
                +  IA  G+  +  RM +++ N+AN+++    P     RR  I        S   
Sbjct: 1   MGFSDAMRIAAGGMEAERVRMNVLAGNLANSQSVHGNPRGVFERRDVIFAAVRPGHSFFD 60

Query: 59  ----------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                       VRV  +  D       +DPG P A+ SG V  PNV+ L E  ++ + +
Sbjct: 61  VLRSPRESPVKEVRVMGMVRDPRPLNRVYDPGSPDADRSGYVLRPNVSKLEEMVNLLDAS 120

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y +NL  +  +  M    L +
Sbjct: 121 RAYESNLTALDDTKQMARKDLTI 143


>gi|229058378|ref|ZP_04196762.1| Flagellar basal-body rod protein FlgC [Bacillus cereus AH603]
 gi|228719887|gb|EEL71477.1| Flagellar basal-body rod protein FlgC [Bacillus cereus AH603]
          Length = 137

 Score = 93.8 bits (231), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 43/138 (31%), Positives = 72/138 (52%), Gaps = 10/138 (7%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---- 59
           +  + + + SGL      M++ S NI NA TTG  PG++PY R+++  E   + +     
Sbjct: 1   MFQAINASGSGLTTARKWMEVTSNNIVNANTTG-APGAEPYHRRSVVLESNNNFASMLDG 59

Query: 60  ----GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
               GV+VK I  D++     +DP HP AN  G V+YPN++V  E  ++    ++Y AN 
Sbjct: 60  APTNGVKVKSIETDRNE-NLVYDPTHPHANEEGYVRYPNIDVTAEMTNVMVAQKMYEANT 118

Query: 116 QTIKQSHDMMTTTLDLLR 133
             +  +  M+   L++ R
Sbjct: 119 SVLNANKKMLDKDLEIGR 136


>gi|77463654|ref|YP_353158.1| flagellar basal-body rod protein FlgC [Rhodobacter sphaeroides
           2.4.1]
 gi|77388072|gb|ABA79257.1| flagellar basal-body rod protein FlgC [Rhodobacter sphaeroides
           2.4.1]
          Length = 138

 Score = 93.8 bits (231), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 29/138 (21%), Positives = 51/138 (36%), Gaps = 5/138 (3%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG- 59
           M+ + +   +    L+ Q  RM  ++ N+ANA T  D   +     + +         G 
Sbjct: 1   MNGIDSVFDVGARALSAQMVRMNTVASNLANAGTVSDKAETAFRPLRPVFETSYADAVGR 60

Query: 60  ----GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
                  V  +          + P HP A+  G V    V+V  E  +M E +R Y   L
Sbjct: 61  TGLSTTDVAGVVSLDREPARVYRPDHPQADPEGYVWEAPVSVDEEMVEMMEASRQYQNTL 120

Query: 116 QTIKQSHDMMTTTLDLLR 133
           + +     +M  T  + +
Sbjct: 121 EAVSTLRSLMARTASMGQ 138


>gi|91794997|ref|YP_564648.1| flagellar basal-body rod protein FlgC [Shewanella denitrificans
           OS217]
 gi|91716999|gb|ABE56925.1| flagellar basal-body rod protein FlgC [Shewanella denitrificans
           OS217]
          Length = 139

 Score = 93.8 bits (231), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 35/139 (25%), Positives = 57/139 (41%), Gaps = 6/139 (4%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--- 58
                   IA +G+  Q+ R+  ++ NIANA T  +TP       K +            
Sbjct: 1   MSFGEIYQIAGAGMNAQTIRLNTVASNIANAGTAAETPEEAYRALKPVFATVYEQFQQNA 60

Query: 59  ---GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
                V V  I    +     ++P HP A+  G V Y NVN + E ADM   +R +  ++
Sbjct: 61  TSGASVEVMDIVQTSAPLDLRYEPNHPYADEQGYVAYSNVNTVDEMADMMAASRSFETSV 120

Query: 116 QTIKQSHDMMTTTLDLLRD 134
           + + ++  M    L L  +
Sbjct: 121 EIMNRARSMQQGLLQLGGN 139


>gi|148554191|ref|YP_001261773.1| flagellar basal-body rod protein FlgC [Sphingomonas wittichii RW1]
 gi|148499381|gb|ABQ67635.1| flagellar basal-body rod protein FlgC [Sphingomonas wittichii RW1]
          Length = 134

 Score = 93.8 bits (231), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 30/134 (22%), Positives = 54/134 (40%), Gaps = 1/134 (0%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-G 59
           M   ++   IA   ++ Q  R+   + N+ANA +   +        K +           
Sbjct: 1   MAGNLSVFDIAGRAMSAQMVRLNTSASNLANAGSVAGSKAEAFRAIKPVFSSVTDAPGVA 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
            V+V ++        + +DP HP A+  G V    V+   E  +M ET R Y  N+  ++
Sbjct: 61  TVKVDQVVASNIEPTKRYDPNHPKADKDGNVWEAGVDQAQELVEMMETARQYQNNVSVMQ 120

Query: 120 QSHDMMTTTLDLLR 133
            +  +   TL L +
Sbjct: 121 TAKTLTLDTLRLGK 134


>gi|206603156|gb|EDZ39636.1| Flagellar basal-body rod protein FlgC [Leptospirillum sp. Group II
           '5-way CG']
          Length = 145

 Score = 93.8 bits (231), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 37/143 (25%), Positives = 58/143 (40%), Gaps = 13/143 (9%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--- 58
                +  IA  G+  +  RM ++S N+AN+++    P     RR  I        S   
Sbjct: 1   MGFSDAMRIAAGGMEAERVRMNVLSGNLANSQSVHGNPRGVFERRDVIFAAVRPGHSFFD 60

Query: 59  ----------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                       VRV  +  D       +DPG P A+ SG V  PNV+ L E  ++ + +
Sbjct: 61  VLRSPRESPVKEVRVMGMVRDPRPLNRVYDPGSPDADRSGYVLRPNVSKLEEMVNLLDAS 120

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y +NL  +  +  M    L +
Sbjct: 121 RAYESNLTALDDTKQMARKDLTI 143


>gi|312884836|ref|ZP_07744528.1| flagellar basal body rod protein FlgC [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309367488|gb|EFP95048.1| flagellar basal body rod protein FlgC [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 145

 Score = 93.4 bits (230), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 33/142 (23%), Positives = 57/142 (40%), Gaps = 10/142 (7%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDP----------YRRKTISF 51
                   IA S +  QS R+  ++ N+ANA                     Y +  +S 
Sbjct: 1   MSFTDIYSIAGSAMNAQSVRLNTVASNLANADAVSANADDAYKALKPVFATVYNKTQLSV 60

Query: 52  EEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
            +  + +  VR+  +        + F+P +P+AN  G V YP+++V+ E ADM    R +
Sbjct: 61  SDNAYPNAEVRIVDVVQSSKQAEKRFEPSNPLANDEGYVYYPDIDVVAEMADMMSATRSF 120

Query: 112 MANLQTIKQSHDMMTTTLDLLR 133
             N+  +     M    L L +
Sbjct: 121 ETNVAVLGNVKSMQQGLLKLGQ 142


>gi|121997321|ref|YP_001002108.1| flagellar basal-body rod protein FlgC [Halorhodospira halophila
           SL1]
 gi|121588726|gb|ABM61306.1| flagellar basal-body rod protein FlgC [Halorhodospira halophila
           SL1]
          Length = 189

 Score = 93.4 bits (230), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 38/189 (20%), Positives = 61/189 (32%), Gaps = 57/189 (30%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH----- 56
             L+ +  +A +G+  Q  R+  ++ N+ANA T   +P      R+ +    +       
Sbjct: 1   MSLMNAIDVAGTGMNAQQLRLNTVASNLANAETVASSPEEAYRARQPVFAAALHQAQGGY 60

Query: 57  --------------GSGGVRVKKIGV-----------------------DQSTFVEEFDP 79
                            G  V +I                           S  V  F P
Sbjct: 61  PQGGGPQPAHTPTWAESGGPVDRISPVSFQRQFFGGEPAGVPSAGDPYASPSPSVPVFMP 120

Query: 80  ---------------GHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
                           HP A+  G V   NVN + E  +M   +R +  N++ +  S D+
Sbjct: 121 GVVESDAEIEPLYQPHHPQADDDGYVYRSNVNTVEEMTNMISASRSFQNNVEVMNTSRDL 180

Query: 125 MTTTLDLLR 133
           M  TL L R
Sbjct: 181 MLETLRLGR 189


>gi|57242334|ref|ZP_00370273.1| flagellar basal-body rod protein FlgC [Campylobacter upsaliensis
           RM3195]
 gi|315638445|ref|ZP_07893622.1| flagellar basal-body rod protein FlgC [Campylobacter upsaliensis
           JV21]
 gi|57017014|gb|EAL53796.1| flagellar basal-body rod protein FlgC [Campylobacter upsaliensis
           RM3195]
 gi|315481436|gb|EFU72063.1| flagellar basal-body rod protein FlgC [Campylobacter upsaliensis
           JV21]
          Length = 164

 Score = 93.4 bits (230), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 52/164 (31%), Positives = 71/164 (43%), Gaps = 32/164 (19%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRK------------- 47
           M YL     I+  GL+ Q  RM +IS NIANA+TT    G    RR+             
Sbjct: 1   MAYLSD-FDISGYGLSAQRFRMNVISSNIANAQTTRTAEGGPYRRREVIFKANDFDALIN 59

Query: 48  ------------------TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGI 89
                               S EE       V V K+  D   F  ++DP HP ANA G 
Sbjct: 60  QQINKDNNFLKYENPLNDPSSPEEAKPAIMSVVVDKVVRDDKDFRMKYDPSHPDANAEGY 119

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           V +PNVN ++E AD+ E  R Y AN+     +  +  + +D+L+
Sbjct: 120 VAFPNVNPVIEMADLIEATRAYQANVSAFTSAKTIAQSAIDILK 163


>gi|255598721|ref|XP_002537067.1| Flagellar basal-body rod protein flgC, putative [Ricinus communis]
 gi|223517602|gb|EEF25316.1| Flagellar basal-body rod protein flgC, putative [Ricinus communis]
          Length = 121

 Score = 93.4 bits (230), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 34/121 (28%), Positives = 64/121 (52%), Gaps = 2/121 (1%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF--EEVMHGSGGVRVKKIGVDQST 72
           ++ QS R+  ++ N+ANA +   + G     ++ +    ++  + S  V V+++  D   
Sbjct: 1   MSAQSMRLNTVASNLANADSVVSSDGKPYQSKQVVFKAVQDAANKSSTVEVERVIEDTKP 60

Query: 73  FVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
               +DP HP+ANA G +  PNVNV  E  +M   +R Y  N++T+  +  M+  TL++ 
Sbjct: 61  GKMVYDPKHPMANADGYITMPNVNVTEEMVNMISASRAYQNNVETMNAAKTMLLKTLNIG 120

Query: 133 R 133
           +
Sbjct: 121 Q 121


>gi|238916744|ref|YP_002930261.1| flagellar basal-body rod protein FlgC [Eubacterium eligens ATCC
           27750]
 gi|238872104|gb|ACR71814.1| flagellar basal-body rod protein FlgC [Eubacterium eligens ATCC
           27750]
          Length = 164

 Score = 93.4 bits (230), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 41/163 (25%), Positives = 64/163 (39%), Gaps = 32/163 (19%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---- 59
           +  + +++ SG+  Q  R  +ISENIANA TT  + G+   R+  +  E+ M G+     
Sbjct: 1   MFTAFNVSASGMTAQQLRTDVISENIANADTTRTSDGTPYVRKAVVFTEKTMTGTALGKS 60

Query: 60  ----------------------------GVRVKKIGVDQSTFVEEFDPGHPVANASGIVK 91
                                                  +     +DP HP A+ +G V 
Sbjct: 61  AYGSYGTGAYSTFSDALRLANGGVVGNGVKVTSVYEDTSTDMEMVYDPSHPDADENGYVT 120

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
           YPNVN + E  D+ + +R Y AN+     S  M T  L +   
Sbjct: 121 YPNVNTVQEMTDLIDASRSYEANISAFNASKSMATKGLSIGSS 163


>gi|218288292|ref|ZP_03492591.1| flagellar basal-body rod protein FlgC [Alicyclobacillus
           acidocaldarius LAA1]
 gi|218241651|gb|EED08824.1| flagellar basal-body rod protein FlgC [Alicyclobacillus
           acidocaldarius LAA1]
          Length = 144

 Score = 93.4 bits (230), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 40/141 (28%), Positives = 55/141 (39%), Gaps = 14/141 (9%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS------- 58
            S  I+ SGLA     + +I+ NIAN  TT    G                 S       
Sbjct: 5   TSMDISASGLAANQLWLNVIANNIANVNTTRTPQGGPYRAEIVNFAPVENDVSFQTALGQ 64

Query: 59  ------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
                 GGV V  I  D S F   +DP +P A  +G V+  NVN+  +  D+ +  R Y 
Sbjct: 65  AVQGIGGGVEVTSITQDTSPFQLIYDPSNPDA-VNGYVESSNVNLTTQMVDLIQATRAYQ 123

Query: 113 ANLQTIKQSHDMMTTTLDLLR 133
           AN      +  M  T L + +
Sbjct: 124 ANATAFDAAKQMAVTALGIGK 144


>gi|224417697|ref|ZP_03655703.1| flagellar basal body rod protein FlgC [Helicobacter canadensis MIT
           98-5491]
 gi|253827046|ref|ZP_04869931.1| flagellar basal body rod protein [Helicobacter canadensis MIT
           98-5491]
 gi|313141240|ref|ZP_07803433.1| flagellar basal body rod protein FlgC [Helicobacter canadensis MIT
           98-5491]
 gi|253510452|gb|EES89111.1| flagellar basal body rod protein [Helicobacter canadensis MIT
           98-5491]
 gi|313130271|gb|EFR47888.1| flagellar basal body rod protein FlgC [Helicobacter canadensis MIT
           98-5491]
          Length = 166

 Score = 93.4 bits (230), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 45/164 (27%), Positives = 67/164 (40%), Gaps = 34/164 (20%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKT--------------- 48
            ++S  I+  GL+ Q  R+ +IS NIANA TT    G    RR+                
Sbjct: 2   FLSSFDISGYGLSAQRQRVNLISSNIANANTTRTDEGGPYRRRELILKAFDFDKVLNQKY 61

Query: 49  -------------------ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGI 89
                                  E       V V KI  D S    +++P HP AN+ G 
Sbjct: 62  QKSNNLLKYEDPLDEMDSFNEQREPKPALMSVYVDKIVRDDSQPKMKYEPNHPDANSEGY 121

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           V YPN+N +VE AD+ E  + Y AN+   + + +M    + + +
Sbjct: 122 VAYPNINAVVEMADLIEATKAYQANVAAFQSAKNMANNAISMFQ 165


>gi|219670161|ref|YP_002460596.1| flagellar basal-body rod protein FlgC [Desulfitobacterium hafniense
           DCB-2]
 gi|219540421|gb|ACL22160.1| flagellar basal-body rod protein FlgC [Desulfitobacterium hafniense
           DCB-2]
          Length = 176

 Score = 93.4 bits (230), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 46/175 (26%), Positives = 68/175 (38%), Gaps = 43/175 (24%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGD-----TPGSDPYRRKTISFEEVMH 56
             +  S  I+ SGL  Q  R+ +IS NIAN  TT            PY+R+ + F+    
Sbjct: 1   MGIFGSMDISASGLTAQRLRLDVISNNIANINTTRTGQLTEAGNQIPYQRQVVVFKARGT 60

Query: 57  GSG-------------------------------GVRVKKIGVDQSTFVEEFDPGHPVAN 85
            S                                GV V+ I  D   F  E++P  P A 
Sbjct: 61  ESSFAETLNQALQGRSVSTTALLQGQTTSGATGNGVEVQAIAEDTLPFRLEYNPDSPDAA 120

Query: 86  ASG-------IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            +         V+ PNVN++ E  DM   +R Y AN+  +  S  MM+  L++ +
Sbjct: 121 QTTEDGIPAGYVRMPNVNIVTEMVDMISASRAYEANVTALNASKAMMSKALEIGK 175


>gi|221639497|ref|YP_002525759.1| Flagellar proximal rod protein FlgC [Rhodobacter sphaeroides KD131]
 gi|221160278|gb|ACM01258.1| Flagellar proximal rod protein FlgC [Rhodobacter sphaeroides KD131]
          Length = 139

 Score = 93.0 bits (229), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 29/138 (21%), Positives = 50/138 (36%), Gaps = 5/138 (3%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG- 59
           M  + +   +    L+ Q  RM  ++ N+ANA T  D   +     + +         G 
Sbjct: 2   MSGIDSVFDVGARALSAQMVRMNTVASNLANAGTVSDKAETAFRPLRPVFETSYADAVGR 61

Query: 60  ----GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
                  V  +          + P HP A+  G V    V+V  E  +M E +R Y   L
Sbjct: 62  TGLSTTDVAGVVSLDREPARVYRPDHPQADPEGYVWEAPVSVDEEMVEMMEASRQYQNTL 121

Query: 116 QTIKQSHDMMTTTLDLLR 133
           + +     +M  T  + +
Sbjct: 122 EAVSTLRSLMARTASMGQ 139


>gi|283784083|ref|YP_003363948.1| lateral flagellar basal-body rod protein [Citrobacter rodentium
           ICC168]
 gi|282947537|emb|CBG87089.1| lateral flagellar basal-body rod protein [Citrobacter rodentium
           ICC168]
          Length = 143

 Score = 93.0 bits (229), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 30/141 (21%), Positives = 56/141 (39%), Gaps = 10/141 (7%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
                   I+ S +  Q+ R+  ++ N+ANA     +       R  +      +   G 
Sbjct: 1   MSFTDIYQISGSAMTAQTIRLNTVASNLANAEAPASSEAQAYKARSPVFAAVYNNSLTGA 60

Query: 62  R----------VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
                        +  +     V+ ++P HP+A+ +G V YP+VNV+ + ADM   +R +
Sbjct: 61  HHRHAIDGASVQVQDVLQSGGAVKRYEPHHPMADNNGYVWYPDVNVVEQMADMMSASRDF 120

Query: 112 MANLQTIKQSHDMMTTTLDLL 132
             N+  +     M  + L L 
Sbjct: 121 ETNVDVLNNVKSMQQSLLKLG 141


>gi|15895433|ref|NP_348782.1| flagellar basal body rod protein FlgC [Clostridium acetobutylicum
           ATCC 824]
 gi|15025157|gb|AAK80122.1|AE007716_11 Flagellar basal body rod protein FlgC [Clostridium acetobutylicum
           ATCC 824]
 gi|325509579|gb|ADZ21215.1| flagellar basal body rod protein FlgC [Clostridium acetobutylicum
           EA 2018]
          Length = 143

 Score = 93.0 bits (229), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 53/132 (40%), Positives = 68/132 (51%), Gaps = 13/132 (9%)

Query: 14  GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE------------VMHGSGGV 61
           GL+ +  RM  IS NIAN  TT    G  PYRRK   F++              +   GV
Sbjct: 13  GLSAERLRMDTISSNIANISTTRTADG-GPYRRKVAVFQDNFENLFNKETGKYENKPLGV 71

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
           R  KI  D+S F  E+DPG+P ANA G V  PNVN+L E ADM  + R Y AN+  +   
Sbjct: 72  RAVKIDEDKSPFRMEYDPGNPDANADGYVAMPNVNILNEMADMMASTRAYEANVTAMNDE 131

Query: 122 HDMMTTTLDLLR 133
             M T  L++ +
Sbjct: 132 KGMYTKALEIGK 143


>gi|332558510|ref|ZP_08412832.1| FlgC [Rhodobacter sphaeroides WS8N]
 gi|332276222|gb|EGJ21537.1| FlgC [Rhodobacter sphaeroides WS8N]
          Length = 138

 Score = 93.0 bits (229), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 29/138 (21%), Positives = 51/138 (36%), Gaps = 5/138 (3%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG- 59
           M  + +  ++    L+ Q  RM  ++ N+ANA T  D   +     + +         G 
Sbjct: 1   MSGIDSVFNVGARALSAQMVRMNTVASNLANAGTVSDRAETAFRPLRPVFETSYADAVGR 60

Query: 60  ----GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
                  V  +          + P HP A+  G V    V+V  E  +M E +R Y   L
Sbjct: 61  TGLSTTDVAGVVSLDREPARVYRPDHPQADPEGYVWEAPVSVDEEMVEMMEASRQYQNTL 120

Query: 116 QTIKQSHDMMTTTLDLLR 133
           + +     +M  T  + +
Sbjct: 121 EAVSTLRSLMARTASMGQ 138


>gi|308050026|ref|YP_003913592.1| flagellar basal-body rod protein FlgC [Ferrimonas balearica DSM
           9799]
 gi|307632216|gb|ADN76518.1| flagellar basal-body rod protein FlgC [Ferrimonas balearica DSM
           9799]
          Length = 138

 Score = 93.0 bits (229), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 36/136 (26%), Positives = 58/136 (42%), Gaps = 5/136 (3%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG- 60
              +    IA S + VQS R+  ++ N+ANA        S     K +       G+GG 
Sbjct: 1   MSFVDIYQIAGSAMNVQSIRLNTVASNLANAEAAAPDEASAYRAIKPVFQTLYEQGNGGG 60

Query: 61  ----VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
               V++  +    +     ++P HP+AN  G V Y NVN + E ADM    R +  ++ 
Sbjct: 61  VSANVQIAGVVQSDAPLESRYEPDHPMANEQGYVTYSNVNTVQEMADMMAATRAFETSVD 120

Query: 117 TIKQSHDMMTTTLDLL 132
            + ++  M    L L 
Sbjct: 121 IMSRARSMQQGLLKLG 136


>gi|148980304|ref|ZP_01815991.1| flagellar basal-body rod protein C [Vibrionales bacterium SWAT-3]
 gi|145961323|gb|EDK26633.1| flagellar basal-body rod protein C [Vibrionales bacterium SWAT-3]
          Length = 142

 Score = 92.6 bits (228), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 33/142 (23%), Positives = 57/142 (40%), Gaps = 9/142 (6%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
              +     A S ++ Q+ R+  IS N+ANA +    P       K I      H +   
Sbjct: 1   MAFLGIYETAGSAMSAQTVRLNTISSNLANADSVSGDPSQVYKPLKPIFSAVYNHFNAQQ 60

Query: 62  ---------RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
                    R+  +    S     ++P +P++N  G V Y  +NV+ E ADM    R + 
Sbjct: 61  TQQQGVVPIRIADVVEVSSMMEGRYEPNNPLSNDEGYVYYSGINVVNEMADMISATRSFE 120

Query: 113 ANLQTIKQSHDMMTTTLDLLRD 134
           A+++ +     M  + + L R 
Sbjct: 121 ASVEVLGNVKSMQQSLMGLWRS 142


>gi|163939550|ref|YP_001644434.1| flagellar basal body rod protein FlgC [Bacillus weihenstephanensis
           KBAB4]
 gi|229132557|ref|ZP_04261406.1| Flagellar basal-body rod protein FlgC [Bacillus cereus BDRD-ST196]
 gi|163861747|gb|ABY42806.1| flagellar basal-body rod protein FlgC [Bacillus weihenstephanensis
           KBAB4]
 gi|228650903|gb|EEL06889.1| Flagellar basal-body rod protein FlgC [Bacillus cereus BDRD-ST196]
          Length = 137

 Score = 92.6 bits (228), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 42/138 (30%), Positives = 71/138 (51%), Gaps = 10/138 (7%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---- 59
           +  + + + SGL      M++ S NI NA TTG  PG++PY R+++  E     +     
Sbjct: 1   MFQAINASGSGLTTARKWMEVTSNNIVNANTTG-APGAEPYHRRSVVLESNNSFASMLDG 59

Query: 60  ----GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
               GV++K I  D++     +DP HP AN  G V+YPN++V  E  ++    ++Y AN 
Sbjct: 60  APTNGVKIKSIETDRNE-NLVYDPTHPHANEEGYVRYPNIDVTAEMTNVMVAQKMYEANT 118

Query: 116 QTIKQSHDMMTTTLDLLR 133
             +  +  M+   L++ R
Sbjct: 119 SVLNANKKMLDKDLEIGR 136


>gi|258511369|ref|YP_003184803.1| flagellar basal-body rod protein FlgC [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
 gi|257478095|gb|ACV58414.1| flagellar basal-body rod protein FlgC [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
          Length = 144

 Score = 92.6 bits (228), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 40/141 (28%), Positives = 56/141 (39%), Gaps = 14/141 (9%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS------- 58
            S +I+ SGLA     + +I+ NIAN  TT    G                 S       
Sbjct: 5   TSMNISASGLAANQLWLNVIANNIANVNTTRTPQGGPYRAEIVNFAPVENDVSFQTALGQ 64

Query: 59  ------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
                 GGV V  I  D S F   +DP +P A  +G V+  NVN+  +  D+ +  R Y 
Sbjct: 65  AVQGIGGGVEVTSITQDTSPFQLIYDPSNPDA-VNGYVETSNVNLTTQMVDLIQATRAYQ 123

Query: 113 ANLQTIKQSHDMMTTTLDLLR 133
           AN      +  M  T L + +
Sbjct: 124 ANATAFDAAKQMAVTALGIGK 144


>gi|68164548|gb|AAY87277.1| predicted flagellar proximal rod protein [uncultured bacterium
           BAC17H8]
          Length = 138

 Score = 92.6 bits (228), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 30/138 (21%), Positives = 53/138 (38%), Gaps = 5/138 (3%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM----- 55
           M  +     +A+  ++ Q  R+  I+ N+ANA     +        K I           
Sbjct: 1   MAGIDNIFDVASRSMSAQLVRLNTIASNLANAGNISGSEDQAYRAMKPIFKTTYAANVKD 60

Query: 56  HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
            G     V  I   +      + P HP+++  G V    VNV  E  +M E  R Y  N+
Sbjct: 61  SGISTTEVAGITTSERRPERIYMPNHPLSDQDGFVYAAAVNVEEEFVEMLEAKRQYQNNV 120

Query: 116 QTIKQSHDMMTTTLDLLR 133
           + +     +M  T+++ +
Sbjct: 121 EVVTTLRALMMRTINMGK 138


>gi|152965614|ref|YP_001361398.1| hypothetical protein Krad_1648 [Kineococcus radiotolerans SRS30216]
 gi|151360131|gb|ABS03134.1| protein of unknown function DUF1078 domain protein [Kineococcus
           radiotolerans SRS30216]
          Length = 131

 Score = 92.6 bits (228), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 33/132 (25%), Positives = 57/132 (43%), Gaps = 2/132 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             +  +  IA +G+ V    M  +S+N+AN  T   T       R             G 
Sbjct: 1   MSIFDAIGIAGTGVTVNRKWMDAVSDNLANINTATRTDEDAFAAR--YVVAAEAADGKGT 58

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
           +V  I    +      +P +P+A+ +G VKYP++++  +   +    R Y ANLQTI  +
Sbjct: 59  QVAGIVTGSTEGRMVHEPDNPLADENGYVKYPDIDMSSQMTSLMMAQRAYQANLQTITSA 118

Query: 122 HDMMTTTLDLLR 133
            +  +  L L +
Sbjct: 119 KEAYSAALQLGK 130


>gi|227873538|ref|ZP_03991783.1| flagellar basal body rod protein [Oribacterium sinus F0268]
 gi|227840628|gb|EEJ51013.1| flagellar basal body rod protein [Oribacterium sinus F0268]
          Length = 136

 Score = 92.6 bits (228), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 42/136 (30%), Positives = 58/136 (42%), Gaps = 17/136 (12%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYR-----------------RKTISFEEVMHG 57
           ++ Q  RM I +ENIAN  TT    GS   R                 R   + +     
Sbjct: 1   MSAQRVRMDIAAENIANVDTTRTEAGSAYKRKDVVLESFGERSFQQALRNAQNGKGFRGQ 60

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
             GVRV+ +  D       ++P HP A+A G V YPNV++L ET D     R Y AN+  
Sbjct: 61  HAGVRVQGVITDDREMKRVYNPNHPDADAQGYVNYPNVDILKETVDSMSATRSYEANVTA 120

Query: 118 IKQSHDMMTTTLDLLR 133
           +     M    LD+ +
Sbjct: 121 LNAMKTMAQRALDIGK 136


>gi|126730138|ref|ZP_01745950.1| flagellar basal-body rod protein FlgC [Sagittula stellata E-37]
 gi|126709518|gb|EBA08572.1| flagellar basal-body rod protein FlgC [Sagittula stellata E-37]
          Length = 129

 Score = 92.2 bits (227), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 49/135 (36%), Positives = 74/135 (54%), Gaps = 9/135 (6%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M     +  + + GL  Q+AR++++SENIAN  T G       YRRK ++F      S  
Sbjct: 1   MSAFSDALSVTSGGLTSQAARLRVVSENIANVDTPG-------YRRKQLNFAVTRGDSSL 53

Query: 61  VRVKKIGVD--QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
            RV+   +D  ++   E +DP HP+A+ +G     NV++++E AD RE  R Y ANL+  
Sbjct: 54  ARVEPGRMDLSRTPLEEVYDPSHPLADETGKYLGSNVDLMIELADAREAQRSYEANLKMF 113

Query: 119 KQSHDMMTTTLDLLR 133
            Q+  M +  LDLLR
Sbjct: 114 DQTRQMSSALLDLLR 128


>gi|229166585|ref|ZP_04294337.1| Flagellar basal-body rod protein FlgC [Bacillus cereus AH621]
 gi|228616839|gb|EEK73912.1| Flagellar basal-body rod protein FlgC [Bacillus cereus AH621]
          Length = 137

 Score = 92.2 bits (227), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 40/138 (28%), Positives = 70/138 (50%), Gaps = 10/138 (7%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---- 59
           +  + + + SGL      M++ S NI N  TTG  PG++PY R+++  E     +     
Sbjct: 1   MFQAINASGSGLTTARKWMEVTSNNIVNVNTTG-APGAEPYHRRSVVLESNNSFASMLDG 59

Query: 60  ----GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
               GV++K I  D++     ++P HP AN  G V+YPN++V  E  ++    ++Y AN 
Sbjct: 60  APTNGVKIKSIETDRNE-NLVYEPTHPHANEEGYVRYPNIDVTAEMTNVMVAQKMYEANT 118

Query: 116 QTIKQSHDMMTTTLDLLR 133
             +  +  M+   L++ R
Sbjct: 119 SVLNANKKMLDKDLEIGR 136


>gi|157147104|ref|YP_001454423.1| flagellar basal body rod protein FlgC [Citrobacter koseri ATCC
           BAA-895]
 gi|157084309|gb|ABV13987.1| hypothetical protein CKO_02881 [Citrobacter koseri ATCC BAA-895]
          Length = 141

 Score = 92.2 bits (227), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 34/139 (24%), Positives = 57/139 (41%), Gaps = 8/139 (5%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--- 58
                   ++ S +  Q+ R+  I+ N+ANA T   T       R+ +      +     
Sbjct: 1   MAFTDIYRVSGSAMTAQTVRLNTIASNLANAETASATEDGVYKARRPVFAAVYKNDELMN 60

Query: 59  -----GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
                G        V+    V+ ++P +P+AN  G V YP+VNV+ E ADM   +R +  
Sbjct: 61  SRALTGARVQVMDVVETGNAVQRYEPHNPMANTDGYVYYPDVNVVEEMADMMSASRGFET 120

Query: 114 NLQTIKQSHDMMTTTLDLL 132
           N+  +     M  + L L 
Sbjct: 121 NVDVLNSVKSMQQSLLRLG 139


>gi|262273531|ref|ZP_06051345.1| flagellar basal-body rod protein FlgC [Grimontia hollisae CIP
           101886]
 gi|262222509|gb|EEY73820.1| flagellar basal-body rod protein FlgC [Grimontia hollisae CIP
           101886]
          Length = 126

 Score = 92.2 bits (227), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 30/124 (24%), Positives = 58/124 (46%), Gaps = 5/124 (4%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV-----RVKKIGVD 69
           +A Q+ R+  ++ N+ANA     +  +    ++ +    ++    G      RVK++   
Sbjct: 1   MAAQTVRLNAVASNLANADVVSGSEQTGYRAKRPVFETVMVDKGNGTQGAMVRVKEVLES 60

Query: 70  QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
            +     ++P HP+AN  G V Y  VN + E ADM   +R +  N+  + ++  M  + L
Sbjct: 61  DAPLQRRYEPNHPLANKEGYVFYSQVNPVEEMADMMSASRNFETNVDVMTRARSMQQSIL 120

Query: 130 DLLR 133
            L +
Sbjct: 121 RLGQ 124


>gi|238752868|ref|ZP_04614333.1| Flagellar basal-body rod protein FlgC [Yersinia rohdei ATCC 43380]
 gi|238708907|gb|EEQ01160.1| Flagellar basal-body rod protein FlgC [Yersinia rohdei ATCC 43380]
          Length = 141

 Score = 91.9 bits (226), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 34/139 (24%), Positives = 56/139 (40%), Gaps = 8/139 (5%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
                   I+ S +  Q+ R+  I+ N+ANA +   +  +    R  +        S   
Sbjct: 1   MSFNNIYRISGSAMTAQTIRLNTIASNLANAESPAASEATVYKARSPVFSAVYSPRSAAA 60

Query: 62  RVKKI--------GVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
                         V+    V+ ++P HP+AN  G V YP VNV+ E ADM   +R +  
Sbjct: 61  PGGVGGAQVQVLDVVETGGSVQRYEPNHPLANPQGYVFYPQVNVVSEMADMMSASRSFET 120

Query: 114 NLQTIKQSHDMMTTTLDLL 132
           N++ +     M  + L L 
Sbjct: 121 NVEVLNSVKSMQQSVLRLG 139


>gi|74317654|ref|YP_315394.1| flagellar basal-body rod protein FlgC [Thiobacillus denitrificans
           ATCC 25259]
 gi|74057149|gb|AAZ97589.1| flagellar basal-body rod protein FlgC [Thiobacillus denitrificans
           ATCC 25259]
          Length = 134

 Score = 91.9 bits (226), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 33/119 (27%), Positives = 58/119 (48%), Gaps = 2/119 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-- 59
             L    ++A S +  QS R+  ++ N+ANA +     G     ++ +     +  +G  
Sbjct: 1   MSLFNIFNVAGSAMNAQSQRLNTVASNLANADSATSANGQPYKAKQVVFAAAPVGDNGAT 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
           GV V  +  D S     +DP +P+A+  G V  PNVNV+ E  +M   +R Y +N++ +
Sbjct: 61  GVNVAAVIDDPSPMKTVYDPKNPLADDKGYVTMPNVNVVEEMVNMISASRSYQSNVEMM 119


>gi|170694390|ref|ZP_02885544.1| flagellar basal-body rod protein FlgC [Burkholderia graminis C4D1M]
 gi|170140813|gb|EDT08987.1| flagellar basal-body rod protein FlgC [Burkholderia graminis C4D1M]
          Length = 127

 Score = 91.9 bits (226), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 36/126 (28%), Positives = 61/126 (48%), Gaps = 8/126 (6%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS--------FEEVMHGSGGVRVKKI 66
           ++ QS R+ + + N+ANA +T    G     ++ +                 GGV+V  +
Sbjct: 1   MSAQSQRLNVTASNLANADSTTGPDGQPYKAKQVVFGVAPIGGARTGSGQQVGGVQVTGV 60

Query: 67  GVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
             D +     +DPG+P ANA G V  PNV+ + E  +M   +R Y AN++T+  +  +M 
Sbjct: 61  VDDPTPMKTAYDPGNPAANADGYVTLPNVDPVQEMVNMISASRSYQANVETLNTAKTLML 120

Query: 127 TTLDLL 132
            TL + 
Sbjct: 121 KTLTIG 126


>gi|254463222|ref|ZP_05076638.1| flagellar basal-body rod protein FlgC [Rhodobacterales bacterium
           HTCC2083]
 gi|206679811|gb|EDZ44298.1| flagellar basal-body rod protein FlgC [Rhodobacteraceae bacterium
           HTCC2083]
          Length = 126

 Score = 91.9 bits (226), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 48/133 (36%), Positives = 77/133 (57%), Gaps = 8/133 (6%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M+   ++   A+SGL  QSAR++ +SENIANA          P   + I   ++   +G 
Sbjct: 1   MNDFSSALSSASSGLKAQSARLRHVSENIANAD--------TPGYHRKIVSFDLSRDTGQ 52

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V + ++ +DQS   E +DP HP+A+A G     NV++++E AD RE  R Y ANL+ + Q
Sbjct: 53  VTIGRLSLDQSQLREIYDPSHPLADAKGNYDSSNVDLIIEIADAREAQRSYEANLKMLDQ 112

Query: 121 SHDMMTTTLDLLR 133
           +  M ++ ++LLR
Sbjct: 113 TRQMSSSLIELLR 125


>gi|297569162|ref|YP_003690506.1| flagellar basal-body rod protein FlgC [Desulfurivibrio alkaliphilus
           AHT2]
 gi|296925077|gb|ADH85887.1| flagellar basal-body rod protein FlgC [Desulfurivibrio alkaliphilus
           AHT2]
          Length = 144

 Score = 91.9 bits (226), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 40/144 (27%), Positives = 68/144 (47%), Gaps = 12/144 (8%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             ++ +  I+ S L  + +R+ + S N+ANA TT    G     +  +   + +    G 
Sbjct: 1   MDILTAMKISGSALKAERSRLNVASMNLANANTTRTMEGGPYRAKSVVFEAKPLDRDFGA 60

Query: 62  RVKK------------IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNR 109
            ++             +  DQ+ F E +DP HP A+ +GIV+YPNVNV  +  DM    R
Sbjct: 61  ALQGAASRLRKVEVVEVVEDQAPFREVYDPAHPDADENGIVRYPNVNVAEQMVDMMNARR 120

Query: 110 LYMANLQTIKQSHDMMTTTLDLLR 133
            Y AN+  ++   +M    +D+ R
Sbjct: 121 SYEANVAALEAVKEMAARAMDISR 144


>gi|6502601|gb|AAF14368.1|AF133240_2 flagellar proximal rod protein FlgC [Rhodobacter sphaeroides]
          Length = 139

 Score = 91.9 bits (226), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 29/138 (21%), Positives = 51/138 (36%), Gaps = 5/138 (3%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG- 59
           M  + +  ++    L+ Q  RM  ++ N+ANA T  D   +     + +         G 
Sbjct: 2   MSGIDSVFNVGARALSAQMVRMNTVASNLANAGTVSDRAETAFRPLRPVFETSYADAVGR 61

Query: 60  ----GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
                  V  +          + P HP A+  G V    V+V  E  +M E +R Y   L
Sbjct: 62  TGLSTTDVAGVVSLDREPARVYRPDHPQADPEGYVWEAPVSVDEEMVEMMEASRQYQNTL 121

Query: 116 QTIKQSHDMMTTTLDLLR 133
           + +     +M  T  + +
Sbjct: 122 EAVSTLRSLMARTASMGQ 139


>gi|152975156|ref|YP_001374673.1| flagellar basal body rod protein FlgC [Bacillus cereus subsp.
           cytotoxis NVH 391-98]
 gi|152023908|gb|ABS21678.1| flagellar basal-body rod protein FlgC [Bacillus cytotoxicus NVH
           391-98]
          Length = 137

 Score = 91.5 bits (225), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 36/137 (26%), Positives = 65/137 (47%), Gaps = 8/137 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR-------KTISFEEVMH 56
           +  + + + SGL      M++ S+NI NA TT    G    RR       +  +      
Sbjct: 1   MFQAINASGSGLTAARKWMEVSSDNIVNANTTSAPDGEPYRRRSVVLESNRNFASMLKEA 60

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
            + GV++ +I  D +     ++P HP ANA G V+YPN+++  E  ++    ++Y AN  
Sbjct: 61  PNDGVKITRIESDPNE-NLVYNPSHPHANAEGYVRYPNIDMTAEMTNVMVAQKMYEANTS 119

Query: 117 TIKQSHDMMTTTLDLLR 133
            +  +  M+   L++ R
Sbjct: 120 VLNANKKMLDKDLEIGR 136


>gi|91202525|emb|CAJ72164.1| strongly similar to flagellar basal-body rod protein FlgC
           [Candidatus Kuenenia stuttgartiensis]
          Length = 147

 Score = 91.5 bits (225), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 41/143 (28%), Positives = 70/143 (48%), Gaps = 13/143 (9%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-- 58
           +  + ++  I+ +GL  +  RM +I+          ++P   PYRR+ + F+ +++ +  
Sbjct: 3   ISKVFSALDISATGLTAERIRMNVIAN-NIANANATNSPDGGPYRREQVEFQSILNKAAN 61

Query: 59  ----------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                     GGV+V  I   +  F + F PGHP A+ +G V+ PNVN+  E  D+   +
Sbjct: 62  LSDIDGMERLGGVKVSNIMKSKEPFNKVFIPGHPQADENGFVEMPNVNIATEMVDLVTAS 121

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y ANL  I  S D+    L +
Sbjct: 122 RSYEANLAVINSSKDITNQALSI 144


>gi|94263245|ref|ZP_01287062.1| Flagellar basal-body rod protein FlgC [delta proteobacterium
           MLMS-1]
 gi|93456463|gb|EAT06583.1| Flagellar basal-body rod protein FlgC [delta proteobacterium
           MLMS-1]
          Length = 144

 Score = 91.5 bits (225), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 37/144 (25%), Positives = 65/144 (45%), Gaps = 12/144 (8%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             ++ + +I+ S L  + +R+ I S N+ANA TT    G     +  +     +      
Sbjct: 1   MDILTAMNISGSALKAERSRLNIASMNMANANTTRTVEGGPYRAKSVVFEARPLERDFNT 60

Query: 62  RVKK------------IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNR 109
            ++             +  D++ F E ++P HP A+ +GIV+YPNVN   +  DM    R
Sbjct: 61  TLQGAASRLRKVEVVEVVEDRAPFREVYEPHHPDADENGIVRYPNVNTAEQMVDMMNARR 120

Query: 110 LYMANLQTIKQSHDMMTTTLDLLR 133
            Y AN+  +    +M    L++ R
Sbjct: 121 SYEANVAALDAVKEMALRALEISR 144


>gi|258622486|ref|ZP_05717508.1| Flagellar basal-body rod protein C [Vibrio mimicus VM573]
 gi|262173352|ref|ZP_06041029.1| flagellar basal-body rod protein FlgC [Vibrio mimicus MB-451]
 gi|258585186|gb|EEW09913.1| Flagellar basal-body rod protein C [Vibrio mimicus VM573]
 gi|261890710|gb|EEY36697.1| flagellar basal-body rod protein FlgC [Vibrio mimicus MB-451]
          Length = 144

 Score = 91.5 bits (225), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 33/141 (23%), Positives = 58/141 (41%), Gaps = 10/141 (7%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDP----------YRRKTISF 51
                   IA S +  Q+ R+  ++ N+ANA                     Y +  ++ 
Sbjct: 1   MSFTDIYSIAGSAMTAQTVRLNTVASNLANADAVSANSDDAYKALKPVFATVYNKTQMAA 60

Query: 52  EEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
            +  + S  VRV  +  +     + F+P +P+AN  G V YP+++V+ E ADM    R +
Sbjct: 61  SDSAYPSAEVRVMDVVQNAGQAEKRFEPNNPLANDEGYVYYPDIDVVAEMADMMSATRSF 120

Query: 112 MANLQTIKQSHDMMTTTLDLL 132
             N++ +     M    L L 
Sbjct: 121 ETNVEVLSNVKSMQQGLLKLG 141


>gi|83944175|ref|ZP_00956631.1| flagellar basal body rod protein [Sulfitobacter sp. EE-36]
 gi|83955124|ref|ZP_00963780.1| flagellar basal body rod protein [Sulfitobacter sp. NAS-14.1]
 gi|83840453|gb|EAP79626.1| flagellar basal body rod protein [Sulfitobacter sp. NAS-14.1]
 gi|83845042|gb|EAP82923.1| flagellar basal body rod protein [Sulfitobacter sp. EE-36]
          Length = 122

 Score = 91.1 bits (224), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 50/122 (40%), Positives = 74/122 (60%), Gaps = 3/122 (2%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV---KKIGVDQS 71
           +  Q  R++I+SEN+ANA +T  T G DPY+RKTISFE     S G  +     +  D +
Sbjct: 1   MRAQGDRLRIVSENLANASSTAQTAGGDPYQRKTISFESATDPSTGAAIVQSAGVLRDDA 60

Query: 72  TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            F   ++P HP A+ +G +K PNVN L+E ++MRE  R Y ANL  + ++ DM    ++L
Sbjct: 61  DFTLRYEPSHPAADQNGYIKMPNVNPLIEMSNMREAARSYEANLSMLDKARDMRRQLVEL 120

Query: 132 LR 133
           L+
Sbjct: 121 LK 122


>gi|195952550|ref|YP_002120840.1| flagellar basal-body rod protein FlgC [Hydrogenobaculum sp.
           Y04AAS1]
 gi|195932162|gb|ACG56862.1| flagellar basal-body rod protein FlgC [Hydrogenobaculum sp.
           Y04AAS1]
          Length = 136

 Score = 91.1 bits (224), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 33/135 (24%), Positives = 57/135 (42%), Gaps = 7/135 (5%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG- 59
           M  +  +  ++ SG+  +  RM  I+ N+AN  +        PY++    F+ V   +  
Sbjct: 1   MLDIFNAFDVSASGMYAERIRMNTIASNLANYESYKT--DGTPYQKLEPVFQAVYDRNML 58

Query: 60  ----GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
                          + F   +DP +P AN  G V+ PN+NV  E  DM    + Y ANL
Sbjct: 59  SDGLVPVNVSEIRQSNGFKLIYDPSNPHANTQGYVEEPNINVTTEMVDMITATQSYQANL 118

Query: 116 QTIKQSHDMMTTTLD 130
                + ++   T++
Sbjct: 119 SAFNMTKNIAQFTIN 133


>gi|258514001|ref|YP_003190223.1| flagellar basal-body rod protein FlgC [Desulfotomaculum acetoxidans
           DSM 771]
 gi|257777706|gb|ACV61600.1| flagellar basal-body rod protein FlgC [Desulfotomaculum acetoxidans
           DSM 771]
          Length = 140

 Score = 91.1 bits (224), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 7/124 (5%)

Query: 17  VQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH-------GSGGVRVKKIGVD 69
            +   + IIS NIAN  TT    G    R+  +  + +          +GGV V ++  D
Sbjct: 16  AERLWLDIISNNIANLNTTRTAKGGPYKRQMPVFSQRLQSVVDSAKTRAGGVEVNRVVQD 75

Query: 70  QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
            +     +DP HP A+  G V YPN+N++ E  +M    R Y AN   ++ S  M    L
Sbjct: 76  NAPPRMVYDPSHPDADQEGNVAYPNINIVNEMVNMMAARRAYEANATALEASKSMAMKAL 135

Query: 130 DLLR 133
           ++ R
Sbjct: 136 EIGR 139


>gi|32474824|ref|NP_867818.1| flagellar basal-body rod potein FlgC [Rhodopirellula baltica SH 1]
 gi|32445364|emb|CAD75365.1| flagellar basal-body rod potein FlgC [Rhodopirellula baltica SH 1]
 gi|327539962|gb|EGF26561.1| flagellar basal-body rod protein FlgC [Rhodopirellula baltica WH47]
          Length = 143

 Score = 91.1 bits (224), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 42/139 (30%), Positives = 70/139 (50%), Gaps = 9/139 (6%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSD-PYRRKTISFE----EVMHG 57
            +I++  I+ S L  Q  R+  IS NIAN  +  D  G+  PY+ + + F+         
Sbjct: 4   AMISALDISTSALVAQRTRLNAISGNIANISSLVDENGNPSPYQARQVVFQTDETASPGE 63

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVA----NASGIVKYPNVNVLVETADMRETNRLYMA 113
           + GV+V ++ +D+S  +  + P HP+A       G V YPN+++  +  D  E+ R Y A
Sbjct: 64  AAGVKVSEVMLDESEPLYRYQPDHPLAINEGKWEGYVAYPNIDLTTQMVDALESTRAYEA 123

Query: 114 NLQTIKQSHDMMTTTLDLL 132
           N+  I+ S  M    L +L
Sbjct: 124 NVGVIEISKGMSRQRLAIL 142


>gi|327254552|gb|EGE66168.1| flagellar basal-body rod protein FlgC [Escherichia coli STEC_7v]
          Length = 143

 Score = 91.1 bits (224), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 31/141 (21%), Positives = 56/141 (39%), Gaps = 10/141 (7%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG---- 57
                   I+ S +  Q+ R+  ++ N+ANA     +       R  +      H     
Sbjct: 1   MSFTDIYQISGSAMTAQTLRLNTVASNLANANAPAGSEAQAYKARSPVFAAVYHHSLLAG 60

Query: 58  ------SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
                  G     +  +     V+ ++P  P+A+A+G V YP+VNV+ + ADM   +R +
Sbjct: 61  THRHAIDGASVQVQDVLQTGGAVKRYEPHSPLADANGDVWYPDVNVVEQMADMMSASRDF 120

Query: 112 MANLQTIKQSHDMMTTTLDLL 132
             N+  +     M  + L L 
Sbjct: 121 ETNVDVLNNVKSMQQSLLKLG 141


>gi|269961597|ref|ZP_06175959.1| Flagellar basal-body rod protein flgC [Vibrio harveyi 1DA3]
 gi|269833638|gb|EEZ87735.1| Flagellar basal-body rod protein flgC [Vibrio harveyi 1DA3]
          Length = 124

 Score = 91.1 bits (224), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 36/124 (29%), Positives = 58/124 (46%), Gaps = 5/124 (4%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG-----VRVKKIGVD 69
           ++ +S R+   S N+ANA +   +       R  +   E+ +   G     V+V  I   
Sbjct: 1   MSAESVRLNTTSSNLANADSVSSSAKDTYKARHAVFGAELSNAMRGGDTVPVKVMGIVES 60

Query: 70  QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
                 E++P HP+AN  G +  PNVNV+ E A+M   +R Y  N+Q    S  M+  TL
Sbjct: 61  DKPLNAEYNPDHPLANDEGYIYKPNVNVMEEMANMISASRAYQTNVQVADSSKQMLLRTL 120

Query: 130 DLLR 133
            + +
Sbjct: 121 QMGQ 124


>gi|94495413|ref|ZP_01301993.1| flagellar cell-proximal portion protein [Sphingomonas sp. SKA58]
 gi|94424801|gb|EAT09822.1| flagellar cell-proximal portion protein [Sphingomonas sp. SKA58]
          Length = 138

 Score = 91.1 bits (224), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 31/133 (23%), Positives = 57/133 (42%), Gaps = 1/133 (0%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-GG 60
           +  +    IA   ++ Q  R+   + N+ANA     +        K +            
Sbjct: 6   NGAMNIFDIAGRAMSAQLVRLNTTASNMANAGNVTGSAQDAYRAIKPVFTSVTDSPGVST 65

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V+V  +   ++   +  DP HP+A+A+G V    V+   E  DM ET R+Y  N+Q +  
Sbjct: 66  VKVSDVVTTKAEPTKRHDPNHPLADANGDVWEAAVDSNAELVDMIETARMYQNNVQVLNT 125

Query: 121 SHDMMTTTLDLLR 133
           +  +M  T+ + +
Sbjct: 126 AKSLMLETIRIGK 138


>gi|322382305|ref|ZP_08056212.1| flagellar basal body rod protein FlgC-like protein [Paenibacillus
           larvae subsp. larvae B-3650]
 gi|321153658|gb|EFX46033.1| flagellar basal body rod protein FlgC-like protein [Paenibacillus
           larvae subsp. larvae B-3650]
          Length = 129

 Score = 91.1 bits (224), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 42/129 (32%), Positives = 60/129 (46%), Gaps = 17/129 (13%)

Query: 22  MQIISENIANARTTGDT---PGSDPYRRKTISFEEVMHGS--------------GGVRVK 64
           M +IS NIANA +T          PY+RK +  E     +               GVRV 
Sbjct: 1   MDVISSNIANADSTRGKFVDGKWVPYQRKMVVVEPKNQTNFAQNLQNAMKNGTGQGVRVS 60

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
            I  DQ+ F   ++P HP ++A G V  PNV++  E  DM    R Y AN+  +  +  M
Sbjct: 61  NIVGDQTPFKRVYNPVHPDSDADGYVYMPNVDIQKEMVDMISATRSYEANVTALNATKGM 120

Query: 125 MTTTLDLLR 133
           +T  L++ R
Sbjct: 121 ITKALEIGR 129


>gi|188583283|ref|YP_001926728.1| hypothetical protein Mpop_4075 [Methylobacterium populi BJ001]
 gi|179346781|gb|ACB82193.1| protein of unknown function DUF1078 domain protein
           [Methylobacterium populi BJ001]
          Length = 113

 Score = 91.1 bits (224), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 46/113 (40%), Positives = 63/113 (55%)

Query: 22  MQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGH 81
           M++  ENIANAR+T   P  +PYRRK   FE +   +      +I  D++ F     PGH
Sbjct: 1   MRVSVENIANARSTASAPDGEPYRRKIAVFEPITGNTEEAPAIRIVRDKTEFPTVHSPGH 60

Query: 82  PVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
           P A+A G +K PNV   VE +++R   R Y ANL+TI    D+   TL LL+ 
Sbjct: 61  PAADAGGNLKLPNVRPTVEMSELRSAMRAYEANLRTIATFDDLKGKTLALLKS 113


>gi|300936123|ref|ZP_07151062.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 21-1]
 gi|300458701|gb|EFK22194.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 21-1]
          Length = 143

 Score = 91.1 bits (224), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 31/141 (21%), Positives = 56/141 (39%), Gaps = 10/141 (7%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG---- 57
                   I+ S +  Q+ R+  ++ N+ANA     +       R  +      H     
Sbjct: 1   MSFTDIYQISGSAMTAQTLRLNTVASNLANANAPASSEAQAYKARSPVFAAVYHHSLLVG 60

Query: 58  ------SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
                  G     +  +     V+ ++P  P+A+A+G V YP+VNV+ + ADM   +R +
Sbjct: 61  THRHAIDGASVQVQDVLQTGGAVKRYEPHSPLADANGDVWYPDVNVVEQMADMMSASRDF 120

Query: 112 MANLQTIKQSHDMMTTTLDLL 132
             N+  +     M  + L L 
Sbjct: 121 ETNVDVLNNVKSMQQSLLKLG 141


>gi|146277710|ref|YP_001167869.1| flagellar basal-body rod protein FlgC [Rhodobacter sphaeroides ATCC
           17025]
 gi|145555951|gb|ABP70564.1| flagellar basal-body rod protein FlgC [Rhodobacter sphaeroides ATCC
           17025]
          Length = 138

 Score = 91.1 bits (224), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 31/138 (22%), Positives = 51/138 (36%), Gaps = 5/138 (3%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG- 59
           M  +     +    L+ Q  RM  ++ N+ANA T  DT  +     + +         G 
Sbjct: 1   MSGINNIFDVGARALSAQMVRMNTVASNLANAGTVSDTAETAFRPLRPVFETTYADAVGK 60

Query: 60  ----GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
                  V  +          + P HP A+A G V    V+V  E  +M E +R Y   L
Sbjct: 61  SGLSTTDVAAVVSLDREPARTYRPDHPQADAEGYVWEAPVSVDEEMVEMMEASRQYQNTL 120

Query: 116 QTIKQSHDMMTTTLDLLR 133
           + +     +M  T  + +
Sbjct: 121 EAVSTLRSLMARTASMGQ 138


>gi|218703523|ref|YP_002411042.1| flagellar basal body rod protein FlgC [Escherichia coli UMN026]
 gi|293403353|ref|ZP_06647444.1| flgC [Escherichia coli FVEC1412]
 gi|298378965|ref|ZP_06988846.1| flagellar basal-body rod protein FlgC [Escherichia coli FVEC1302]
 gi|300900363|ref|ZP_07118538.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 198-1]
 gi|218430620|emb|CAR11486.1| putative Flagellar basal-body rod protein flgC ( proximal rod
           protein) [Escherichia coli UMN026]
 gi|291429206|gb|EFF02226.1| flgC [Escherichia coli FVEC1412]
 gi|298280078|gb|EFI21582.1| flagellar basal-body rod protein FlgC [Escherichia coli FVEC1302]
 gi|300356119|gb|EFJ71989.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 198-1]
          Length = 143

 Score = 90.7 bits (223), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 31/141 (21%), Positives = 56/141 (39%), Gaps = 10/141 (7%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG---- 57
                   I+ S +  Q+ R+  ++ N+ANA     +       R  +      H     
Sbjct: 1   MSFTDIYQISGSAMTAQTIRLNTVASNLANANAPAGSEAQAYKARSPVFAAVYHHSLLAG 60

Query: 58  ------SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
                  G     +  +     V+ ++P  P+A+A+G V YP+VNV+ + ADM   +R +
Sbjct: 61  THRHAIDGASVQVQDVLQTGGAVKRYEPHSPLADANGDVWYPDVNVVEQMADMMSASRDF 120

Query: 112 MANLQTIKQSHDMMTTTLDLL 132
             N+  +     M  + L L 
Sbjct: 121 ETNVDVLNNVKSMQQSLLKLG 141


>gi|306813306|ref|ZP_07447499.1| flagellar basal body rod protein FlgC [Escherichia coli NC101]
 gi|305854069|gb|EFM54508.1| flagellar basal body rod protein FlgC [Escherichia coli NC101]
          Length = 143

 Score = 90.3 bits (222), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 31/141 (21%), Positives = 56/141 (39%), Gaps = 10/141 (7%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG---- 57
                   I+ S +  Q+ R+  ++ N+ANA     +       R  +      H     
Sbjct: 1   MSFTDIYQISGSAMTAQTLRLNTVASNLANANAPASSEAQAYKARSPVFAAVYHHSLLSG 60

Query: 58  ------SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
                  G     +  +     V+ ++P  P+A+A+G V YP+VNV+ + ADM   +R +
Sbjct: 61  THRHAIDGASVQVQDVLQTGGAVKRYEPHSPLADANGDVWYPDVNVVEQMADMMSASRDF 120

Query: 112 MANLQTIKQSHDMMTTTLDLL 132
             N+  +     M  + L L 
Sbjct: 121 ETNVDVLNNVKSMQQSLLKLG 141


>gi|315281376|ref|ZP_07870013.1| flagellar basal-body rod protein FlgC [Listeria marthii FSL S4-120]
 gi|313614973|gb|EFR88480.1| flagellar basal-body rod protein FlgC [Listeria marthii FSL S4-120]
          Length = 136

 Score = 90.3 bits (222), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 41/136 (30%), Positives = 68/136 (50%), Gaps = 7/136 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS------FEEVMHG 57
           +    + + S L      M++ S NIANA ++   PG  P+ RK +       FE  + G
Sbjct: 1   MFEGINTSGSALNAAKQWMEVSSNNIANADSSA-APGETPFLRKRVVLSEITPFETALTG 59

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           + GV+V +I  D  +    +DP HP AN +G V Y NV++  E  ++    ++Y AN   
Sbjct: 60  TKGVKVSEISSDTGSVKRVYDPTHPNANEAGYVNYANVDMTAEMTNLMVGQKMYAANTSA 119

Query: 118 IKQSHDMMTTTLDLLR 133
           ++ +  MM   L++ R
Sbjct: 120 LQANEKMMEKDLEIGR 135


>gi|170021362|ref|YP_001726316.1| flagellar basal body rod protein FlgC [Escherichia coli ATCC 8739]
 gi|170683008|ref|YP_001742371.1| flagellar basal body rod protein FlgC [Escherichia coli SMS-3-5]
 gi|188492955|ref|ZP_03000225.1| flagellar basal-body rod protein FlgC [Escherichia coli 53638]
 gi|260853464|ref|YP_003227355.1| putative lateral flagellar component of cell-proximal portion of
           basal-body rod [Escherichia coli O26:H11 str. 11368]
 gi|260866411|ref|YP_003232813.1| putative lateral flagellar component of cell-proximal portion of
           basal-body rod [Escherichia coli O111:H- str. 11128]
 gi|331645416|ref|ZP_08346520.1| flagellar basal-body rod protein FlgC [Escherichia coli M605]
 gi|331666544|ref|ZP_08367418.1| flagellar basal-body rod protein FlgC [Escherichia coli TA271]
 gi|331671802|ref|ZP_08372598.1| flagellar basal-body rod protein FlgC [Escherichia coli TA280]
 gi|169756290|gb|ACA78989.1| flagellar basal-body rod protein FlgC [Escherichia coli ATCC 8739]
 gi|170520726|gb|ACB18904.1| lateral flagellar basal-body rod protein LfgC [Escherichia coli
           SMS-3-5]
 gi|188488154|gb|EDU63257.1| flagellar basal-body rod protein FlgC [Escherichia coli 53638]
 gi|257752113|dbj|BAI23615.1| predicted lateral flagellar component of cell-proximal portion of
           basal-body rod [Escherichia coli O26:H11 str. 11368]
 gi|257762767|dbj|BAI34262.1| predicted lateral flagellar component of cell-proximal portion of
           basal-body rod [Escherichia coli O111:H- str. 11128]
 gi|323158105|gb|EFZ44204.1| flagellar basal-body rod protein FlgC [Escherichia coli EPECa14]
 gi|323171061|gb|EFZ56710.1| flagellar basal-body rod protein FlgC [Escherichia coli LT-68]
 gi|323181545|gb|EFZ66965.1| flagellar basal-body rod protein FlgC [Escherichia coli 1357]
 gi|331045578|gb|EGI17704.1| flagellar basal-body rod protein FlgC [Escherichia coli M605]
 gi|331065768|gb|EGI37652.1| flagellar basal-body rod protein FlgC [Escherichia coli TA271]
 gi|331070791|gb|EGI42150.1| flagellar basal-body rod protein FlgC [Escherichia coli TA280]
          Length = 143

 Score = 90.3 bits (222), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 31/141 (21%), Positives = 56/141 (39%), Gaps = 10/141 (7%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG---- 57
                   I+ S +  Q+ R+  ++ N+ANA     +       R  +      H     
Sbjct: 1   MSFTDIYQISGSAMTAQTLRLNTVASNLANANAPASSEAQAYKARSPVFAAVYHHSLLAG 60

Query: 58  ------SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
                  G     +  +     V+ ++P  P+A+A+G V YP+VNV+ + ADM   +R +
Sbjct: 61  THRHAIDGASVQVQDVLQTGGAVKRYEPHSPLADANGDVWYPDVNVVEQMADMMSASRDF 120

Query: 112 MANLQTIKQSHDMMTTTLDLL 132
             N+  +     M  + L L 
Sbjct: 121 ETNVDVLNNVKSMQQSLLKLG 141


>gi|228907377|ref|ZP_04071235.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis IBL
           200]
 gi|228852238|gb|EEM97034.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis IBL
           200]
          Length = 137

 Score = 90.3 bits (222), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 41/138 (29%), Positives = 69/138 (50%), Gaps = 10/138 (7%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---- 59
           +  + + + SGL      M++ S NI NA TT   PG+D Y R+++  E     +     
Sbjct: 1   MFQAINASGSGLTTARKWMEVTSNNIVNANTTA-APGTDLYERRSVVLESNNSFASMLDG 59

Query: 60  ----GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
               GV++K I  D++     +DP HP AN  G V+YPN++V  E  ++    ++Y AN 
Sbjct: 60  SPTNGVKIKSIEADKTE-NLVYDPTHPHANEEGYVRYPNIDVTAEMTNVMVAQKMYEANT 118

Query: 116 QTIKQSHDMMTTTLDLLR 133
             +  +  M+   L++ R
Sbjct: 119 SVLNANKKMLDKDLEIGR 136


>gi|47566127|ref|ZP_00237165.1| flagellar basal-body rod protein flgC [Bacillus cereus G9241]
 gi|206974761|ref|ZP_03235676.1| flagellar basal-body rod protein FlgC [Bacillus cereus H3081.97]
 gi|217959228|ref|YP_002337776.1| flagellar basal body rod protein FlgC [Bacillus cereus AH187]
 gi|229138444|ref|ZP_04267033.1| Flagellar basal-body rod protein FlgC [Bacillus cereus BDRD-ST26]
 gi|47557044|gb|EAL15374.1| flagellar basal-body rod protein flgC [Bacillus cereus G9241]
 gi|206746780|gb|EDZ58172.1| flagellar basal-body rod protein FlgC [Bacillus cereus H3081.97]
 gi|217065314|gb|ACJ79564.1| flagellar basal-body rod protein FlgC [Bacillus cereus AH187]
 gi|228644981|gb|EEL01224.1| Flagellar basal-body rod protein FlgC [Bacillus cereus BDRD-ST26]
          Length = 137

 Score = 90.3 bits (222), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 42/138 (30%), Positives = 69/138 (50%), Gaps = 10/138 (7%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---- 59
           +  + + + SGL      M++ S NI NA TT   PG+D Y R+++  E     +     
Sbjct: 1   MFQAINASGSGLTTARKWMEVTSNNIVNANTTA-APGADLYERRSVVLESNNSFANMLEG 59

Query: 60  ----GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
               GV++K I  D++     +DP HP AN  G V+YPNV+V  E  ++    ++Y AN 
Sbjct: 60  TPTNGVKIKSIEADKTE-NLVYDPTHPHANEEGYVRYPNVDVTAEMTNVMVAQKMYEANT 118

Query: 116 QTIKQSHDMMTTTLDLLR 133
             +  +  M+   L++ R
Sbjct: 119 SVLNANKKMLDKDLEIGR 136


>gi|229043498|ref|ZP_04191208.1| Flagellar basal-body rod protein FlgC [Bacillus cereus AH676]
 gi|229144356|ref|ZP_04272762.1| Flagellar basal-body rod protein FlgC [Bacillus cereus BDRD-ST24]
 gi|296502344|ref|YP_003664044.1| flagellar basal body rod protein FlgC [Bacillus thuringiensis
           BMB171]
 gi|228639143|gb|EEK95567.1| Flagellar basal-body rod protein FlgC [Bacillus cereus BDRD-ST24]
 gi|228725876|gb|EEL77123.1| Flagellar basal-body rod protein FlgC [Bacillus cereus AH676]
 gi|296323396|gb|ADH06324.1| flagellar basal body rod protein FlgC [Bacillus thuringiensis
           BMB171]
          Length = 137

 Score = 89.9 bits (221), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 41/138 (29%), Positives = 69/138 (50%), Gaps = 10/138 (7%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---- 59
           +  + + + SGL      M++ S NI NA TT   PG+D Y R+++  E     +     
Sbjct: 1   MFQAINASGSGLTTARKWMEVTSNNIVNANTTA-APGTDLYERRSVVLESNNSFASMLDG 59

Query: 60  ----GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
               GV++K I  D++     +DP HP AN  G V+YPN++V  E  ++    ++Y AN 
Sbjct: 60  APTNGVKIKSIEADKTE-NLVYDPTHPHANEEGYVRYPNIDVTAEMTNVMVAQKMYEANT 118

Query: 116 QTIKQSHDMMTTTLDLLR 133
             +  +  M+   L++ R
Sbjct: 119 SVLNANKKMLDKDLEIGR 136


>gi|30019789|ref|NP_831420.1| flagellar basal body rod protein FlgC [Bacillus cereus ATCC 14579]
 gi|29895334|gb|AAP08621.1| Flagellar basal-body rod protein flgC [Bacillus cereus ATCC 14579]
          Length = 137

 Score = 89.9 bits (221), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 41/138 (29%), Positives = 68/138 (49%), Gaps = 10/138 (7%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---- 59
           +  + + + SGL      MQ+ S NI NA T    PG+D Y R+++  E     +     
Sbjct: 1   MFQAINASGSGLTTARKWMQVTSNNIVNANTPA-APGADLYERRSVVLESNNSFASMLDG 59

Query: 60  ----GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
               GV++K I  D++     +DP HP AN  G V+YPN++V  E  ++    ++Y AN 
Sbjct: 60  APTNGVKIKSIEADKTE-NLVYDPTHPHANEEGYVRYPNIDVTAEMTNVMVAQKMYEANT 118

Query: 116 QTIKQSHDMMTTTLDLLR 133
             +  +  M+   L++ R
Sbjct: 119 SVLNANKKMLDKDLEIGR 136


>gi|218230982|ref|YP_002366429.1| flagellar basal body rod protein FlgC [Bacillus cereus B4264]
 gi|218158939|gb|ACK58931.1| flagellar basal-body rod protein FlgC [Bacillus cereus B4264]
          Length = 137

 Score = 89.9 bits (221), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 41/138 (29%), Positives = 69/138 (50%), Gaps = 10/138 (7%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---- 59
           +  + + + SGL      M++ S NI NA TT   PG+D Y R+++  E     +     
Sbjct: 1   MFQAINASGSGLTTARKWMEVTSNNIVNANTTA-APGADLYERRSVVLESNNSFASMLDG 59

Query: 60  ----GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
               GV++K I  D++     +DP HP AN  G V+YPN++V  E  ++    ++Y AN 
Sbjct: 60  APTNGVKIKSIEADKTE-NLVYDPTHPHANKEGYVRYPNIDVTAEMTNVMVAQKMYEANT 118

Query: 116 QTIKQSHDMMTTTLDLLR 133
             +  +  M+   L++ R
Sbjct: 119 SVLNANKKMLDKDLEIGR 136


>gi|16799794|ref|NP_470062.1| flagellar basal body rod protein FlgC [Listeria innocua Clip11262]
 gi|16802753|ref|NP_464238.1| flagellar basal body rod protein FlgC [Listeria monocytogenes
           EGD-e]
 gi|46906962|ref|YP_013351.1| flagellar basal body rod protein FlgC [Listeria monocytogenes
           serotype 4b str. F2365]
 gi|47091674|ref|ZP_00229470.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes str.
           4b H7858]
 gi|47095277|ref|ZP_00232888.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes str.
           1/2a F6854]
 gi|217965191|ref|YP_002350869.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes
           HCC23]
 gi|224498793|ref|ZP_03667142.1| flagellar basal body rod protein FlgC [Listeria monocytogenes
           Finland 1988]
 gi|224501984|ref|ZP_03670291.1| flagellar basal body rod protein FlgC [Listeria monocytogenes FSL
           R2-561]
 gi|226223342|ref|YP_002757449.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes
           Clip81459]
 gi|254824009|ref|ZP_05229010.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes FSL
           J1-194]
 gi|254829368|ref|ZP_05234055.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes FSL
           N3-165]
 gi|254830298|ref|ZP_05234953.1| flagellar basal body rod protein FlgC [Listeria monocytogenes
           10403S]
 gi|254900053|ref|ZP_05259977.1| flagellar basal body rod protein FlgC [Listeria monocytogenes
           J0161]
 gi|254911394|ref|ZP_05261406.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes
           J2818]
 gi|254932009|ref|ZP_05265368.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes
           HPB2262]
 gi|254935721|ref|ZP_05267418.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes
           F6900]
 gi|255022492|ref|ZP_05294478.1| flagellar basal body rod protein FlgC [Listeria monocytogenes FSL
           J1-208]
 gi|255025679|ref|ZP_05297665.1| flagellar basal body rod protein FlgC [Listeria monocytogenes FSL
           J2-003]
 gi|284801041|ref|YP_003412906.1| flagellar basal body rod protein FlgC [Listeria monocytogenes
           08-5578]
 gi|284994183|ref|YP_003415951.1| flagellar basal body rod protein FlgC [Listeria monocytogenes
           08-5923]
 gi|290894009|ref|ZP_06556984.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes FSL
           J2-071]
 gi|16410100|emb|CAC98789.1| lmo0711 [Listeria monocytogenes EGD-e]
 gi|16413171|emb|CAC95951.1| lin0719 [Listeria innocua Clip11262]
 gi|46880228|gb|AAT03528.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes
           serotype 4b str. F2365]
 gi|47016348|gb|EAL07270.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes str.
           1/2a F6854]
 gi|47019993|gb|EAL10730.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes str.
           4b H7858]
 gi|217334461|gb|ACK40255.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes
           HCC23]
 gi|225875804|emb|CAS04507.1| Putative flagellar basal-body rod protein FlgC [Listeria
           monocytogenes serotype 4b str. CLIP 80459]
 gi|258601782|gb|EEW15107.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes FSL
           N3-165]
 gi|258608305|gb|EEW20913.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes
           F6900]
 gi|284056603|gb|ADB67544.1| flagellar basal body rod protein FlgC [Listeria monocytogenes
           08-5578]
 gi|284059650|gb|ADB70589.1| flagellar basal body rod protein FlgC [Listeria monocytogenes
           08-5923]
 gi|290556455|gb|EFD89994.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes FSL
           J2-071]
 gi|293583560|gb|EFF95592.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes
           HPB2262]
 gi|293589332|gb|EFF97666.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes
           J2818]
 gi|293593236|gb|EFG00997.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes FSL
           J1-194]
 gi|307570250|emb|CAR83429.1| flagellar basal-body rod protein [Listeria monocytogenes L99]
 gi|313610106|gb|EFR85431.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes FSL
           F2-208]
 gi|328467276|gb|EGF38356.1| flagellar basal body rod protein FlgC [Listeria monocytogenes 1816]
 gi|328475672|gb|EGF46421.1| flagellar basal body rod protein FlgC [Listeria monocytogenes 220]
 gi|332311135|gb|EGJ24230.1| Flagellar basal-body rod protein FlgC [Listeria monocytogenes str.
           Scott A]
          Length = 136

 Score = 89.9 bits (221), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 40/136 (29%), Positives = 68/136 (50%), Gaps = 7/136 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS------FEEVMHG 57
           +    + + S L      M++ S NIANA ++   PG  P+ RK +       FE  + G
Sbjct: 1   MFEGINTSGSALNAAKQWMEVSSNNIANADSSA-APGETPFLRKRVVLSEITPFETALTG 59

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           + GV+V +I  D  +    +DP HP AN +G V Y NV++  E  ++    ++Y AN   
Sbjct: 60  TKGVKVSEISSDTGSVKRVYDPTHPNANEAGYVNYANVDMTAEMTNLMVGQKMYAANTSA 119

Query: 118 IKQSHDMMTTTLDLLR 133
           ++ +  MM   L++ +
Sbjct: 120 LQANEKMMEKDLEIGK 135


>gi|307293789|ref|ZP_07573633.1| flagellar basal-body rod protein FlgC [Sphingobium chlorophenolicum
           L-1]
 gi|306879940|gb|EFN11157.1| flagellar basal-body rod protein FlgC [Sphingobium chlorophenolicum
           L-1]
          Length = 136

 Score = 89.9 bits (221), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 30/130 (23%), Positives = 55/130 (42%), Gaps = 1/130 (0%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-GGVRV 63
           +    IA   ++ Q  R+   + N+ANA     +        K +            V+V
Sbjct: 7   MNVFDIAGRAMSAQLVRLNATASNMANAGNVTGSAAEAYRAIKPVFQSVTDSPGVSTVKV 66

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
           + +    +   +  DP HP+A+ +G V    V+   E  DM ET R+Y  N+Q +  +  
Sbjct: 67  QNVVTTNAQPTKRHDPNHPLADKNGDVWEAAVDSSAELVDMIETARMYQNNVQVLNTAKS 126

Query: 124 MMTTTLDLLR 133
           +M  T+ + +
Sbjct: 127 LMMETIRIGK 136


>gi|258625236|ref|ZP_05720148.1| Flagellar basal-body rod protein C [Vibrio mimicus VM603]
 gi|258582483|gb|EEW07320.1| Flagellar basal-body rod protein C [Vibrio mimicus VM603]
          Length = 144

 Score = 89.9 bits (221), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 33/141 (23%), Positives = 58/141 (41%), Gaps = 10/141 (7%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDP----------YRRKTISF 51
                   IA S +  Q+ R+  ++ N+ANA                     Y +  ++ 
Sbjct: 1   MSFTDIYSIAGSAMTAQTVRLNTVASNLANADAVSANSDDAYKALKPVFATVYNKTQMAA 60

Query: 52  EEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
            +  + S  VRV  +  +     + F+P +P+AN  G V YP+++V+ E ADM    R +
Sbjct: 61  SDSAYPSAEVRVMDVVQNAGQAEKRFEPNNPLANDEGYVYYPDIDVVAEMADMMSATRSF 120

Query: 112 MANLQTIKQSHDMMTTTLDLL 132
             N++ +     M    L L 
Sbjct: 121 ETNVEMLSNVKSMQQGLLKLG 141


>gi|254853085|ref|ZP_05242433.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes FSL
           R2-503]
 gi|255521221|ref|ZP_05388458.1| flagellar basal body rod protein FlgC [Listeria monocytogenes FSL
           J1-175]
 gi|300764524|ref|ZP_07074517.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes FSL
           N1-017]
 gi|258606433|gb|EEW19041.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes FSL
           R2-503]
 gi|300514878|gb|EFK41932.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes FSL
           N1-017]
          Length = 136

 Score = 89.9 bits (221), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 40/136 (29%), Positives = 67/136 (49%), Gaps = 7/136 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS------FEEVMHG 57
           +    + + S L      M++ S NIANA ++   PG  P+ RK +       FE  + G
Sbjct: 1   MFEGINTSGSALNAAKQWMEVSSNNIANADSSA-APGETPFLRKRVVLSEITPFETALTG 59

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           + GV+V +I  D       +DP HP AN +G V Y NV++  E  ++    ++Y AN   
Sbjct: 60  TKGVKVSEISSDTGNVKRVYDPTHPNANEAGYVNYANVDMTAEMTNLMVGQKMYAANTSA 119

Query: 118 IKQSHDMMTTTLDLLR 133
           ++ +  MM   L++ +
Sbjct: 120 LQANEKMMEKDLEIGK 135


>gi|293408365|ref|ZP_06652204.1| flagellar basal-body rod protein FlgC [Escherichia coli B354]
 gi|291471543|gb|EFF14026.1| flagellar basal-body rod protein FlgC [Escherichia coli B354]
          Length = 143

 Score = 89.9 bits (221), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 31/141 (21%), Positives = 56/141 (39%), Gaps = 10/141 (7%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH----- 56
                   I+ S +  Q+ R+  ++ N+ANA     +       R  +      H     
Sbjct: 1   MSFTDIYQISGSAMTAQTLRLNTVASNLANAEAPAGSEAQAYKARSPVFAAVYHHSLLAG 60

Query: 57  -----GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
                  G     +  +     V+ ++P  P+A+A+G V YP+VNV+ + ADM   +R +
Sbjct: 61  THRHAMDGASVQVQDVLQTGGAVKRYEPHSPLADANGDVWYPDVNVVEQMADMMSASRDF 120

Query: 112 MANLQTIKQSHDMMTTTLDLL 132
             N+  +     M  + L L 
Sbjct: 121 ETNVDVLNNVKSMQQSLLKLG 141


>gi|116872100|ref|YP_848881.1| flagellar basal body rod protein FlgC [Listeria welshimeri serovar
           6b str. SLCC5334]
 gi|116740978|emb|CAK20098.1| flagellar basal-body rod protein FlgC [Listeria welshimeri serovar
           6b str. SLCC5334]
          Length = 136

 Score = 89.9 bits (221), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 40/136 (29%), Positives = 68/136 (50%), Gaps = 7/136 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS------FEEVMHG 57
           +    + + S L      M++ S NIANA ++   PG  P+ RK +       FE  + G
Sbjct: 1   MFEGINTSGSALNAAKQWMEVSSNNIANADSSA-APGETPFLRKRVVLSEITPFETALTG 59

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           + GV+V +I  D  +    +DP HP AN +G V Y NV++  E  ++    ++Y AN   
Sbjct: 60  TKGVKVSEISADTGSVKRVYDPTHPNANEAGYVNYANVDMTAEMTNLMVGQKMYAANTSA 119

Query: 118 IKQSHDMMTTTLDLLR 133
           ++ +  MM   L++ +
Sbjct: 120 LQANEKMMEKDLEIGK 135


>gi|254993619|ref|ZP_05275809.1| flagellar basal body rod protein FlgC [Listeria monocytogenes FSL
           J2-064]
          Length = 136

 Score = 89.9 bits (221), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 40/136 (29%), Positives = 68/136 (50%), Gaps = 7/136 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS------FEEVMHG 57
           +    + + S L      M++ S NIANA ++   PG  P+ RK +       FE  + G
Sbjct: 1   MFEGINTSGSALNAAKQWMEVSSNNIANADSSA-APGETPFLRKRVVLSEITPFETALTG 59

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           + GV+V +I  D  +    +DP HP AN +G V Y NV++  E  ++    ++Y AN   
Sbjct: 60  TKGVKVSEISSDTGSVKRVYDPTHPNANEAGYVNYANVDMTAEMTNLMVXQKMYAANTSA 119

Query: 118 IKQSHDMMTTTLDLLR 133
           ++ +  MM   L++ +
Sbjct: 120 LQANEKMMEKDLEIGK 135


>gi|323975932|gb|EGB71026.1| flagellar basal-body rod protein FlgC [Escherichia coli TW10509]
          Length = 143

 Score = 89.5 bits (220), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 30/141 (21%), Positives = 56/141 (39%), Gaps = 10/141 (7%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG---- 57
                   I+ S +  Q+ R+  ++ N+ANA     +       R  +      H     
Sbjct: 1   MSFTDIYQISGSAMTAQTLRLNTVASNLANANAPASSEAQAYKARSPVFAAVYHHSLLAG 60

Query: 58  ------SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
                  G     +  +     ++ ++P  P+A+A+G V YP+VNV+ + ADM   +R +
Sbjct: 61  THRHAIDGASVQVQDVLQTGGALKRYEPHSPLADANGDVWYPDVNVVEQMADMMSASRDF 120

Query: 112 MANLQTIKQSHDMMTTTLDLL 132
             N+  +     M  + L L 
Sbjct: 121 ETNVDVLNNVKSMQQSLLKLG 141


>gi|146278635|ref|YP_001168794.1| flagellar basal body rod protein FlgC [Rhodobacter sphaeroides ATCC
           17025]
 gi|145556876|gb|ABP71489.1| protein of unknown function DUF1078 domain protein [Rhodobacter
           sphaeroides ATCC 17025]
          Length = 126

 Score = 89.5 bits (220), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 46/133 (34%), Positives = 69/133 (51%), Gaps = 8/133 (6%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M  L  S  ++ SG+  Q+ R++ +SENIAN           P   +     +    SG 
Sbjct: 1   MTDLSQSLSLSASGMRSQALRLRHVSENIANVD--------TPGFHRKTVSFQSEPDSGL 52

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V    + +D+S+  + +DPGHP+A+ +G     NVN++VE AD RE  R Y ANL+   Q
Sbjct: 53  VSTGPVRLDRSSLQKMYDPGHPMADDTGYYDGSNVNLVVEIADAREAQRSYEANLRMFDQ 112

Query: 121 SHDMMTTTLDLLR 133
           +  M  +  DLLR
Sbjct: 113 ARQMTQSLFDLLR 125


>gi|75761144|ref|ZP_00741136.1| Flagellar basal-body rod protein flgC [Bacillus thuringiensis
           serovar israelensis ATCC 35646]
 gi|206970905|ref|ZP_03231857.1| flagellar basal-body rod protein FlgC [Bacillus cereus AH1134]
 gi|218896677|ref|YP_002445088.1| flagellar basal-body rod protein FlgC [Bacillus cereus G9842]
 gi|228900326|ref|ZP_04064556.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis IBL
           4222]
 gi|228920455|ref|ZP_04083800.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
 gi|228952124|ref|ZP_04114219.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
           serovar kurstaki str. T03a001]
 gi|228958024|ref|ZP_04119760.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
           serovar pakistani str. T13001]
 gi|229069296|ref|ZP_04202586.1| Flagellar basal-body rod protein FlgC [Bacillus cereus F65185]
 gi|229078926|ref|ZP_04211478.1| Flagellar basal-body rod protein FlgC [Bacillus cereus Rock4-2]
 gi|229109201|ref|ZP_04238800.1| Flagellar basal-body rod protein FlgC [Bacillus cereus Rock1-15]
 gi|229127070|ref|ZP_04256069.1| Flagellar basal-body rod protein FlgC [Bacillus cereus BDRD-Cer4]
 gi|229149946|ref|ZP_04278174.1| Flagellar basal-body rod protein FlgC [Bacillus cereus m1550]
 gi|229178153|ref|ZP_04305524.1| Flagellar basal-body rod protein FlgC [Bacillus cereus 172560W]
 gi|229189841|ref|ZP_04316852.1| Flagellar basal-body rod protein FlgC [Bacillus cereus ATCC 10876]
 gi|74491372|gb|EAO54596.1| Flagellar basal-body rod protein flgC [Bacillus thuringiensis
           serovar israelensis ATCC 35646]
 gi|206734541|gb|EDZ51711.1| flagellar basal-body rod protein FlgC [Bacillus cereus AH1134]
 gi|218541427|gb|ACK93821.1| flagellar basal-body rod protein FlgC [Bacillus cereus G9842]
 gi|228593649|gb|EEK51457.1| Flagellar basal-body rod protein FlgC [Bacillus cereus ATCC 10876]
 gi|228605283|gb|EEK62733.1| Flagellar basal-body rod protein FlgC [Bacillus cereus 172560W]
 gi|228633627|gb|EEK90228.1| Flagellar basal-body rod protein FlgC [Bacillus cereus m1550]
 gi|228656423|gb|EEL12262.1| Flagellar basal-body rod protein FlgC [Bacillus cereus BDRD-Cer4]
 gi|228674211|gb|EEL29456.1| Flagellar basal-body rod protein FlgC [Bacillus cereus Rock1-15]
 gi|228704340|gb|EEL56774.1| Flagellar basal-body rod protein FlgC [Bacillus cereus Rock4-2]
 gi|228713783|gb|EEL65668.1| Flagellar basal-body rod protein FlgC [Bacillus cereus F65185]
 gi|228801649|gb|EEM48530.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
           serovar pakistani str. T13001]
 gi|228807656|gb|EEM54180.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
           serovar kurstaki str. T03a001]
 gi|228839085|gb|EEM84381.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
 gi|228859361|gb|EEN03791.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis IBL
           4222]
          Length = 137

 Score = 89.5 bits (220), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 41/138 (29%), Positives = 69/138 (50%), Gaps = 10/138 (7%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---- 59
           +  + + + SGL      M++ S NI NA TT   PG+D Y R+++  E     +     
Sbjct: 1   MFQAINASGSGLTTARKWMEVTSNNIVNANTTA-APGADLYERRSVVLESNNSFASMLDG 59

Query: 60  ----GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
               GV++K I  D++     +DP HP AN  G V+YPN++V  E  ++    ++Y AN 
Sbjct: 60  APTNGVKIKSIEADKTE-NLVYDPTHPHANEEGYVRYPNIDVTAEMTNVMVAQKMYEANT 118

Query: 116 QTIKQSHDMMTTTLDLLR 133
             +  +  M+   L++ R
Sbjct: 119 SVLNANKKMLDKDLEIGR 136


>gi|313624695|gb|EFR94652.1| flagellar basal-body rod protein FlgC [Listeria innocua FSL J1-023]
          Length = 136

 Score = 89.5 bits (220), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 40/136 (29%), Positives = 68/136 (50%), Gaps = 7/136 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS------FEEVMHG 57
           +    + + S L      M++ S NIANA ++   PG  P+ RK +       FE  + G
Sbjct: 1   MFEGINTSGSALNAAKQWMEVSSNNIANADSSA-APGETPFLRKRVVLSEITPFETALTG 59

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           + GV+V +I  D  +    +DP HP AN +G V Y NV++  E  ++    ++Y AN   
Sbjct: 60  TXGVKVSEISSDTGSVKRVYDPTHPNANEAGYVNYANVDMTAEMTNLMVGQKMYAANTSA 119

Query: 118 IKQSHDMMTTTLDLLR 133
           ++ +  MM   L++ +
Sbjct: 120 LQANEKMMEKDLEIGK 135


>gi|229172391|ref|ZP_04299950.1| Flagellar basal-body rod protein FlgC [Bacillus cereus MM3]
 gi|228610862|gb|EEK68125.1| Flagellar basal-body rod protein FlgC [Bacillus cereus MM3]
          Length = 137

 Score = 89.5 bits (220), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 37/137 (27%), Positives = 62/137 (45%), Gaps = 8/137 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKT-------ISFEEVMH 56
           +  + + + SGL      M++ S NI NA TT         RR          +      
Sbjct: 1   MFQAINASGSGLTTARKWMEVTSNNIVNANTTAAPGADLYERRSVVLESNNSFANMLEGS 60

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
            + GV++K I  D++     +DP HP AN  G V+YPN++V  E  ++    ++Y AN  
Sbjct: 61  PTNGVKIKSIEADKTE-NLVYDPTHPHANEEGYVRYPNIDVTAEMTNVMVAQKMYEANTS 119

Query: 117 TIKQSHDMMTTTLDLLR 133
            +  +  M+   L++ R
Sbjct: 120 VLNANKKMLDKDLEIGR 136


>gi|304321145|ref|YP_003854788.1| putative flagellar basal-body rod protein FlgC [Parvularcula
           bermudensis HTCC2503]
 gi|303300047|gb|ADM09646.1| putative flagellar basal-body rod protein FlgC [Parvularcula
           bermudensis HTCC2503]
          Length = 127

 Score = 89.5 bits (220), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 45/132 (34%), Positives = 73/132 (55%), Gaps = 9/132 (6%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
           D L+ S  IA  G+  QS RM+ ++EN++N  T G       Y+RK ++F         V
Sbjct: 3   DPLLTSLRIAGDGMNAQSFRMRTVNENLSNIDTPG-------YQRKMLTFST--GNEQAV 53

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
           RV ++ +      +  DPGHP+A+A G V+  NV++L E +D RE  R + AN++  +Q+
Sbjct: 54  RVSRMILSSDEARKVHDPGHPLADADGFVEMSNVDMLTELSDAREAKRSFDANIEAFRQA 113

Query: 122 HDMMTTTLDLLR 133
            +M    + L+R
Sbjct: 114 REMYAGLISLMR 125


>gi|294013084|ref|YP_003546544.1| flagellar basal-body rod protein FlgC [Sphingobium japonicum UT26S]
 gi|292676414|dbj|BAI97932.1| flagellar basal-body rod protein FlgC [Sphingobium japonicum UT26S]
          Length = 138

 Score = 89.5 bits (220), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 30/130 (23%), Positives = 55/130 (42%), Gaps = 1/130 (0%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-GGVRV 63
           +    IA   ++ Q  R+   + N+ANA     +        K +            V+V
Sbjct: 9   MNVFDIAGRAMSAQLVRLNATASNMANAGNVTGSAAEAYRAIKPVFQSVTDSPGVSTVKV 68

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
           + +    +   +  DP HP+A+ +G V    V+   E  DM ET R+Y  N+Q +  +  
Sbjct: 69  QNVVTTNAQPTKRHDPNHPLADKNGDVWEAAVDSSAELVDMIETARMYQNNVQVLNTAKS 128

Query: 124 MMTTTLDLLR 133
           +M  T+ + +
Sbjct: 129 LMMETIRIGK 138


>gi|23008564|ref|ZP_00049957.1| COG1558: Flagellar basal body rod protein [Magnetospirillum
           magnetotacticum MS-1]
          Length = 118

 Score = 89.5 bits (220), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 60/118 (50%), Positives = 87/118 (73%), Gaps = 3/118 (2%)

Query: 20  ARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV---RVKKIGVDQSTFVEE 76
            RM+++SEN+ANA++TG TPG+DPY RKT++F+  +  + G+   R+++IG D++ F  E
Sbjct: 1   MRMRVVSENLANAQSTGATPGADPYSRKTVTFQAALDRAAGIASVRLREIGTDKTPFRTE 60

Query: 77  FDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
            DP +P A+ +G VK PNVN+LVE ADMRE NR Y ANLQ IKQ+  M+ + +DLL+ 
Sbjct: 61  HDPANPAADENGNVKLPNVNMLVEMADMREANRSYEANLQVIKQARAMVASVIDLLKS 118


>gi|30261743|ref|NP_844120.1| flagellar basal body rod protein FlgC [Bacillus anthracis str.
           Ames]
 gi|47526963|ref|YP_018312.1| flagellar basal body rod protein FlgC [Bacillus anthracis str.
           'Ames Ancestor']
 gi|49184573|ref|YP_027825.1| flagellar basal body rod protein FlgC [Bacillus anthracis str.
           Sterne]
 gi|49480942|ref|YP_035864.1| flagellar basal body rod protein FlgC [Bacillus thuringiensis
           serovar konkukian str. 97-27]
 gi|52143711|ref|YP_083115.1| flagellar basal body rod protein FlgC [Bacillus cereus E33L]
 gi|65319012|ref|ZP_00391971.1| COG1558: Flagellar basal body rod protein [Bacillus anthracis str.
           A2012]
 gi|165869530|ref|ZP_02214189.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str.
           A0488]
 gi|167633252|ref|ZP_02391577.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str.
           A0442]
 gi|170686301|ref|ZP_02877523.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str.
           A0465]
 gi|170706453|ref|ZP_02896913.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str.
           A0389]
 gi|190566322|ref|ZP_03019240.1| flagellar basal-body rod protein FlgC [Bacillus anthracis
           Tsiankovskii-I]
 gi|196038959|ref|ZP_03106266.1| flagellar basal-body rod protein FlgC [Bacillus cereus NVH0597-99]
 gi|218902859|ref|YP_002450693.1| flagellar basal-body rod protein FlgC [Bacillus cereus AH820]
 gi|227815498|ref|YP_002815507.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str. CDC
           684]
 gi|228914323|ref|ZP_04077938.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
 gi|228926780|ref|ZP_04089848.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
           serovar pondicheriensis BGSC 4BA1]
 gi|228933028|ref|ZP_04095891.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
           serovar andalousiensis BGSC 4AW1]
 gi|228945347|ref|ZP_04107702.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
           serovar monterrey BGSC 4AJ1]
 gi|229090705|ref|ZP_04221938.1| Flagellar basal-body rod protein FlgC [Bacillus cereus Rock3-42]
 gi|229121296|ref|ZP_04250527.1| Flagellar basal-body rod protein FlgC [Bacillus cereus 95/8201]
 gi|229155315|ref|ZP_04283426.1| Flagellar basal-body rod protein FlgC [Bacillus cereus ATCC 4342]
 gi|229602307|ref|YP_002866143.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str.
           A0248]
 gi|254683233|ref|ZP_05147094.1| flagellar basal body rod protein FlgC [Bacillus anthracis str.
           CNEVA-9066]
 gi|254723821|ref|ZP_05185607.1| flagellar basal body rod protein FlgC [Bacillus anthracis str.
           A1055]
 gi|254740994|ref|ZP_05198682.1| flagellar basal body rod protein FlgC [Bacillus anthracis str.
           Kruger B]
 gi|254755237|ref|ZP_05207271.1| flagellar basal body rod protein FlgC [Bacillus anthracis str.
           Vollum]
 gi|254759773|ref|ZP_05211797.1| flagellar basal body rod protein FlgC [Bacillus anthracis str.
           Australia 94]
 gi|300117337|ref|ZP_07055127.1| flagellar basal body rod protein FlgC [Bacillus cereus SJ1]
 gi|301053281|ref|YP_003791492.1| flagellar basal body rod protein [Bacillus anthracis CI]
 gi|30255971|gb|AAP25606.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str.
           Ames]
 gi|47502111|gb|AAT30787.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str.
           'Ames Ancestor']
 gi|49178500|gb|AAT53876.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str.
           Sterne]
 gi|49332498|gb|AAT63144.1| flagellar basal-body rod protein [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|51977180|gb|AAU18730.1| flagellar basal-body rod protein [Bacillus cereus E33L]
 gi|164714970|gb|EDR20488.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str.
           A0488]
 gi|167531290|gb|EDR93968.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str.
           A0442]
 gi|170128551|gb|EDS97418.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str.
           A0389]
 gi|170669998|gb|EDT20739.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str.
           A0465]
 gi|190562457|gb|EDV16424.1| flagellar basal-body rod protein FlgC [Bacillus anthracis
           Tsiankovskii-I]
 gi|196030104|gb|EDX68704.1| flagellar basal-body rod protein FlgC [Bacillus cereus NVH0597-99]
 gi|218535692|gb|ACK88090.1| flagellar basal-body rod protein FlgC [Bacillus cereus AH820]
 gi|227007024|gb|ACP16767.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str. CDC
           684]
 gi|228628240|gb|EEK84956.1| Flagellar basal-body rod protein FlgC [Bacillus cereus ATCC 4342]
 gi|228662141|gb|EEL17750.1| Flagellar basal-body rod protein FlgC [Bacillus cereus 95/8201]
 gi|228692647|gb|EEL46373.1| Flagellar basal-body rod protein FlgC [Bacillus cereus Rock3-42]
 gi|228814319|gb|EEM60585.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
           serovar monterrey BGSC 4AJ1]
 gi|228826629|gb|EEM72400.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
           serovar andalousiensis BGSC 4AW1]
 gi|228832893|gb|EEM78462.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
           serovar pondicheriensis BGSC 4BA1]
 gi|228845317|gb|EEM90353.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
 gi|229266715|gb|ACQ48352.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str.
           A0248]
 gi|298725172|gb|EFI65824.1| flagellar basal body rod protein FlgC [Bacillus cereus SJ1]
 gi|300375450|gb|ADK04354.1| flagellar basal body rod protein [Bacillus cereus biovar anthracis
           str. CI]
          Length = 137

 Score = 89.5 bits (220), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 37/137 (27%), Positives = 62/137 (45%), Gaps = 8/137 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------H 56
           +  + + + SGL      M++ S NI NA TT         RR  +              
Sbjct: 1   MFQAINASGSGLTTARKWMEVTSNNIVNANTTAAPGADLYERRSVVLESNNSFANMLDGS 60

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
            + GV++K I  D++     +DP HP AN  G V+YPN++V  E  ++    ++Y AN  
Sbjct: 61  PTNGVKIKSIEADKTE-NLVYDPTHPHANEEGYVRYPNIDVTAEMTNVMVAQKMYEANTS 119

Query: 117 TIKQSHDMMTTTLDLLR 133
            +  +  M+   L++ R
Sbjct: 120 VLNANKKMLDKDLEIGR 136


>gi|218778520|ref|YP_002429838.1| flagellar basal-body rod protein FlgC [Desulfatibacillum
           alkenivorans AK-01]
 gi|218759904|gb|ACL02370.1| Flagellar basal-body rod protein FlgC [Desulfatibacillum
           alkenivorans AK-01]
          Length = 142

 Score = 89.5 bits (220), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 42/142 (29%), Positives = 69/142 (48%), Gaps = 10/142 (7%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR----------KTISF 51
             L+ + H + S L+V  A+M ++SEN+ANA TT    G    R+          +  + 
Sbjct: 1   MDLLNAMHASASALSVSRAQMNVVSENLANANTTRTANGQPYQRKFLVVSPAPVKEHENL 60

Query: 52  EEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
                   GV++  I  DQS F   + P HP A+ +G ++ PNVNV+ E A+M    R+Y
Sbjct: 61  SVGEQVVEGVKLVDIVADQSPFPMVYRPEHPDADENGNLQLPNVNVVTEMANMLMAKRVY 120

Query: 112 MANLQTIKQSHDMMTTTLDLLR 133
            +N   +  +  M    L++ +
Sbjct: 121 DSNAAALSTARSMALKALEIGK 142


>gi|323191536|gb|EFZ76797.1| flagellar basal-body rod protein FlgC [Escherichia coli RN587/1]
          Length = 143

 Score = 89.5 bits (220), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 30/141 (21%), Positives = 56/141 (39%), Gaps = 10/141 (7%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG---- 57
                   I+ S +  Q+ R+  ++ N+ANA     +       R  +      +     
Sbjct: 1   MSFTDIYQISGSAMTAQTLRLNTVASNLANANAPASSEAQAYKARSPVFAAVYHNSLLAG 60

Query: 58  ------SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
                  G     +  +     V+ ++P  P+A+A+G V YP+VNV+ + ADM   +R +
Sbjct: 61  THRHAIDGASVQVQDVLQTGGAVKRYEPHSPLADANGDVWYPDVNVVEQMADMMSASRDF 120

Query: 112 MANLQTIKQSHDMMTTTLDLL 132
             N+  +     M  + L L 
Sbjct: 121 ETNVDVLNNVKSMQQSLLKLG 141


>gi|15639388|ref|NP_218837.1| flagellar basal body rod protein FlgC [Treponema pallidum subsp.
           pallidum str. Nichols]
 gi|189025630|ref|YP_001933402.1| flagellar basal body rod protein FlgC [Treponema pallidum subsp.
           pallidum SS14]
 gi|3322680|gb|AAC65385.1| flagellar basal-body rod protein (flgC) [Treponema pallidum subsp.
           pallidum str. Nichols]
 gi|189018205|gb|ACD70823.1| flagellar basal-body rod protein [Treponema pallidum subsp.
           pallidum SS14]
          Length = 129

 Score = 89.5 bits (220), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 41/128 (32%), Positives = 58/128 (45%), Gaps = 19/128 (14%)

Query: 25  ISENIANARTTGDTPGSDPY--------------RRKTISFEEVMHGSG-GVRVKKIGVD 69
           IS+NIANA +T    G                   R     E++  G G GVRV  I  D
Sbjct: 2   ISDNIANASSTRTQEGGVFRRSRVVLAQKNPGIDWRIPFVPEQLDRGVGTGVRVVSIEKD 61

Query: 70  QSTFVEEFDPGHPVA----NASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
            +     +DP HP A      +G V+YPNV+++ E  D+   +R Y AN+  I  S +M 
Sbjct: 62  NAPSRLVYDPTHPDAILSGPKAGYVEYPNVDIVTEMVDLISASRAYEANISVISGSKEMF 121

Query: 126 TTTLDLLR 133
              L++ R
Sbjct: 122 QRALEIAR 129


>gi|118477180|ref|YP_894331.1| flagellar basal body rod protein FlgC [Bacillus thuringiensis str.
           Al Hakam]
 gi|118416405|gb|ABK84824.1| flagellar basal-body rod protein [Bacillus thuringiensis str. Al
           Hakam]
          Length = 137

 Score = 89.5 bits (220), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 41/138 (29%), Positives = 69/138 (50%), Gaps = 10/138 (7%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---- 59
           +  + + + SGL      M++ S NI NA TT   PG+D Y R+++  E     +     
Sbjct: 1   MFQAINASGSGLTTARKWMEVTSNNIVNANTTA-APGADLYERRSVVLESNNSFANMLDG 59

Query: 60  ----GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
               GV++K I  D++     +DP HP AN  G V+YPN++V  E  ++    ++Y AN 
Sbjct: 60  SLTNGVKIKSIEADKTE-NLVYDPTHPHANEEGYVRYPNIDVTAEMTNVMVAQKMYEANT 118

Query: 116 QTIKQSHDMMTTTLDLLR 133
             +  +  M+   L++ R
Sbjct: 119 SVLNANKKMLDKDLEIGR 136


>gi|262396037|ref|YP_003287890.1| flagellar basal-body rod protein FlgC [Vibrio sp. Ex25]
 gi|262339631|gb|ACY53425.1| flagellar basal-body rod protein FlgC [Vibrio sp. Ex25]
          Length = 131

 Score = 89.2 bits (219), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 30/129 (23%), Positives = 59/129 (45%), Gaps = 10/129 (7%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDP----------YRRKTISFEEVMHGSGGVRVK 64
           +  Q+ R+  ++ N+ANA      P              Y++  ++ E  ++ +  VR+ 
Sbjct: 1   MTAQTVRLNTVASNLANADAVSANPDDAYKALKPVFATVYQKAQLTTENGVYPNAEVRIV 60

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
            +  +     + F+P +P+AN  G V YP+++V+ E ADM    R +  N++ +     M
Sbjct: 61  DVVKNAGEAEKRFEPNNPLANGEGYVYYPDIDVVAEMADMMSATRSFETNVEVLSNVKSM 120

Query: 125 MTTTLDLLR 133
               L L +
Sbjct: 121 QQGLLRLGQ 129


>gi|167948872|ref|ZP_02535946.1| Flagellar basal-body rod protein FlgC [Endoriftia persephone
           'Hot96_1+Hot96_2']
          Length = 124

 Score = 89.2 bits (219), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 28/124 (22%), Positives = 58/124 (46%), Gaps = 5/124 (4%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-----GVRVKKIGVD 69
           ++ QS R+ +++ N+AN      +       R+ +    V   +      GV +  +   
Sbjct: 1   MSAQSLRLNLVASNMANVDAVSSSIDETYRARQPVFRAMVDQFNPDAPAVGVSMVGVIES 60

Query: 70  QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
           Q+  + E+ P H +A+ +G +  PNVN + E A+M   +R Y  N++    +  ++  TL
Sbjct: 61  QAPLIREYAPDHQMADEAGYIFRPNVNPVEEMANMISASRSYQGNVEVASAAKQLLMATL 120

Query: 130 DLLR 133
            + +
Sbjct: 121 RMGQ 124


>gi|196033444|ref|ZP_03100856.1| flagellar basal-body rod protein FlgC [Bacillus cereus W]
 gi|195993878|gb|EDX57834.1| flagellar basal-body rod protein FlgC [Bacillus cereus W]
          Length = 137

 Score = 89.2 bits (219), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 37/137 (27%), Positives = 62/137 (45%), Gaps = 8/137 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------H 56
           +  + + + SGL      M++ S NI NA TT         RR  +              
Sbjct: 1   MFQAINASGSGLTTARKWMEVTSNNIVNANTTAAPGADIYERRSVVLESNNSFANMLDGS 60

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
            + GV++K I  D++     +DP HP AN  G V+YPN++V  E  ++    ++Y AN  
Sbjct: 61  PTNGVKIKSIEADKTE-NLVYDPTHPHANEEGYVRYPNIDVTAEMTNVMVAQKMYEANTS 119

Query: 117 TIKQSHDMMTTTLDLLR 133
            +  +  M+   L++ R
Sbjct: 120 VLNANKKMLDKDLEIGR 136


>gi|238762361|ref|ZP_04623332.1| Flagellar basal-body rod protein FlgC [Yersinia kristensenii ATCC
           33638]
 gi|238699346|gb|EEP92092.1| Flagellar basal-body rod protein FlgC [Yersinia kristensenii ATCC
           33638]
          Length = 141

 Score = 89.2 bits (219), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 35/139 (25%), Positives = 55/139 (39%), Gaps = 8/139 (5%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
                   I+ S +  Q+ R+  I+ N+ANA +   +       R  I        S   
Sbjct: 1   MSFNNIYRISGSAMTAQTIRLNTIASNLANADSPAASAAEAYKARSPIFSAVYSPRSAAN 60

Query: 62  RVKK--------IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
                         V+    V+ ++P HP+AN  G V YP VNV+ E ADM   +R +  
Sbjct: 61  PRGVNGAQVQVLDVVEVRETVQRYEPNHPLANPQGYVFYPAVNVVSEMADMMSASRSFET 120

Query: 114 NLQTIKQSHDMMTTTLDLL 132
           N++ +     M  + L L 
Sbjct: 121 NVEVLNSVKSMQQSVLKLG 139


>gi|332162903|ref|YP_004299480.1| flagellar basal-body rod protein [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|318604250|emb|CBY25748.1| flagellar basal-body rod protein FlgC [Yersinia enterocolitica
           subsp. palearctica Y11]
 gi|325667133|gb|ADZ43777.1| Flagellar basal-body rod protein [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|330863353|emb|CBX73476.1| flagellar basal-body rod protein flgC [Yersinia enterocolitica
           W22703]
          Length = 141

 Score = 89.2 bits (219), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 33/139 (23%), Positives = 56/139 (40%), Gaps = 8/139 (5%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
                   ++ S +  Q+ R+  I+ N+ANA +   +  +    R  +        S   
Sbjct: 1   MSFNNIYRVSGSAMTAQTIRLNAIASNLANAESPAASAATVYKARSPVFSAVYSPRSATN 60

Query: 62  RVKK--------IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
                         V+    V+ ++P HP+AN  G V YP VNV+ E ADM   +R +  
Sbjct: 61  PGGVNGAQVQVLDVVETGGSVQRYEPNHPLANPQGYVFYPAVNVVSEMADMMSASRSFET 120

Query: 114 NLQTIKQSHDMMTTTLDLL 132
           N++ +     M  + L L 
Sbjct: 121 NVEVLNSVKSMQQSVLRLG 139


>gi|42780837|ref|NP_978084.1| flagellar basal body rod protein FlgC [Bacillus cereus ATCC 10987]
 gi|222095368|ref|YP_002529428.1| flagellar basal body rod protein flgc [Bacillus cereus Q1]
 gi|229195957|ref|ZP_04322710.1| Flagellar basal-body rod protein FlgC [Bacillus cereus m1293]
 gi|42736757|gb|AAS40692.1| flagellar basal-body rod protein FlgC [Bacillus cereus ATCC 10987]
 gi|221239426|gb|ACM12136.1| flagellar basal-body rod protein FlgC [Bacillus cereus Q1]
 gi|228587516|gb|EEK45581.1| Flagellar basal-body rod protein FlgC [Bacillus cereus m1293]
          Length = 137

 Score = 89.2 bits (219), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 42/138 (30%), Positives = 69/138 (50%), Gaps = 10/138 (7%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---- 59
           +  + + + SGL      M++ S NI NA TT   PG+D Y R+++  E     +     
Sbjct: 1   MFQAINASGSGLTTARKWMEVTSNNIVNANTTA-APGADLYERRSVVLESNNSFANMLDS 59

Query: 60  ----GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
               GV++K I  D++     +DP HP AN  G V+YPNV+V  E  ++    ++Y AN 
Sbjct: 60  APTNGVKIKSIEADKTE-NLVYDPTHPHANEEGYVRYPNVDVTAEMTNVMVAQKMYEANT 118

Query: 116 QTIKQSHDMMTTTLDLLR 133
             +  +  M+   L++ R
Sbjct: 119 SVLNANKKMLDKDLEIGR 136


>gi|283834457|ref|ZP_06354198.1| flagellar basal-body rod protein FlgC [Citrobacter youngae ATCC
           29220]
 gi|291070004|gb|EFE08113.1| flagellar basal-body rod protein FlgC [Citrobacter youngae ATCC
           29220]
          Length = 143

 Score = 89.2 bits (219), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 29/141 (20%), Positives = 58/141 (41%), Gaps = 10/141 (7%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
                   I+ S +  Q+ R+  ++ N+ANA +   +       R  +      +   G 
Sbjct: 1   MSFTDIYQISGSAMTAQTIRLNTVASNMANAESPASSEAQAYKARSPVFAAVYNNSLIGG 60

Query: 62  RVK----------KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
             +          +  +     V+ ++P HP+A+ +G V YP+VNV+ + ADM   +R +
Sbjct: 61  HNRHAIDGASVQVQDVMQSGGAVKRYEPHHPMADQNGFVWYPDVNVVEQMADMMSASRDF 120

Query: 112 MANLQTIKQSHDMMTTTLDLL 132
             ++  +     M  + L L 
Sbjct: 121 ETDVDVLNNVKSMQQSLLKLG 141


>gi|299822287|ref|ZP_07054173.1| flagellar basal-body rod protein FlgC [Listeria grayi DSM 20601]
 gi|299815816|gb|EFI83054.1| flagellar basal-body rod protein FlgC [Listeria grayi DSM 20601]
          Length = 136

 Score = 89.2 bits (219), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 38/136 (27%), Positives = 70/136 (51%), Gaps = 7/136 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV------MHG 57
           +  S +   S L      M+I S+NIANA ++   PG  PY RK++  +E+      ++G
Sbjct: 1   MFESINTNGSALNAAKTWMEISSDNIANANSSA-APGEAPYARKSVVLQEISPFEAKLNG 59

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
             GV+V+ I  D       +DP HP ++  G V+Y N+++  E  ++    ++Y AN   
Sbjct: 60  VNGVKVENIVSDTKNVKTVYDPTHPNSDQDGYVRYANIDLTAEMTNIMVGQKMYAANTSA 119

Query: 118 IKQSHDMMTTTLDLLR 133
           ++ +  M+   L++ +
Sbjct: 120 LQANEKMLDKELEIGK 135


>gi|149202210|ref|ZP_01879183.1| flagellar basal-body rod protein FlgC [Roseovarius sp. TM1035]
 gi|149144308|gb|EDM32339.1| flagellar basal-body rod protein FlgC [Roseovarius sp. TM1035]
          Length = 138

 Score = 89.2 bits (219), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 29/137 (21%), Positives = 54/137 (39%), Gaps = 5/137 (3%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG- 60
             +     +A+S ++ Q  R+  ++ N+ANA+    T        + +        +G  
Sbjct: 1   MMIKNIFDVASSAMSAQMVRLNTVASNMANAQAVSTTKEEAYRPLRPVFETIYADQTGQS 60

Query: 61  ----VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
                 V  +       V  + P HP+A+  G V    VN   E  +M E +R Y   L+
Sbjct: 61  GLSTTHVTDVVQLDREPVRAYRPDHPMADEEGFVYESVVNPDEEMVEMVEASRQYQNVLE 120

Query: 117 TIKQSHDMMTTTLDLLR 133
           T+     +M  T+ + +
Sbjct: 121 TVSTLRTLMARTVMMGQ 137


>gi|229029424|ref|ZP_04185507.1| Flagellar basal-body rod protein FlgC [Bacillus cereus AH1271]
 gi|228731883|gb|EEL82782.1| Flagellar basal-body rod protein FlgC [Bacillus cereus AH1271]
          Length = 137

 Score = 88.8 bits (218), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 38/137 (27%), Positives = 62/137 (45%), Gaps = 8/137 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKT-------ISFEEVMH 56
           +  + + + SGL      M++ S NI NA TT         RR          +      
Sbjct: 1   MFQAINASGSGLTTARKWMEVTSNNIVNANTTAAPGADLYERRSVVLESNNSFANMLDAA 60

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
            + GV++K I  D++     +DP HP AN  G V+YPNV+V  E  ++    ++Y AN  
Sbjct: 61  PTNGVKIKSIEADKTE-NLVYDPTHPHANEEGYVRYPNVDVTAEMTNVMVAQKMYEANTS 119

Query: 117 TIKQSHDMMTTTLDLLR 133
            +  +  M+   L++ R
Sbjct: 120 VLNANKKMLDKDLEIGR 136


>gi|167639076|ref|ZP_02397349.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str.
           A0193]
 gi|177650375|ref|ZP_02933342.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str.
           A0174]
 gi|254734585|ref|ZP_05192297.1| flagellar basal body rod protein FlgC [Bacillus anthracis str.
           Western North America USA6153]
 gi|167512866|gb|EDR88239.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str.
           A0193]
 gi|172083519|gb|EDT68579.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str.
           A0174]
          Length = 137

 Score = 88.8 bits (218), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 37/137 (27%), Positives = 62/137 (45%), Gaps = 8/137 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM-------H 56
           +  + + + SGL      M++ S NI NA TT         RR  +              
Sbjct: 1   MFQAINASGSGLTTARKWMEVTSNNIVNANTTAAPGADLYERRSVVLESNNSFANMLDRS 60

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
            + GV++K I  D++     +DP HP AN  G V+YPN++V  E  ++    ++Y AN  
Sbjct: 61  PTNGVKIKSIEADKTE-NLVYDPTHPHANEEGYVRYPNIDVTAEMTNVMVAQKMYEANTS 119

Query: 117 TIKQSHDMMTTTLDLLR 133
            +  +  M+   L++ R
Sbjct: 120 VLNANKKMLDKDLEIGR 136


>gi|254499115|ref|ZP_05111805.1| flagellar basal-body rod protein FlgC [Legionella drancourtii
           LLAP12]
 gi|254351654|gb|EET10499.1| flagellar basal-body rod protein FlgC [Legionella drancourtii
           LLAP12]
          Length = 140

 Score = 88.8 bits (218), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 30/129 (23%), Positives = 56/129 (43%), Gaps = 6/129 (4%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYR------RKTISFEEVMHGSGGVRV 63
           IA+ G+  +  R+ +++ NIAN  +     GS           K+ +         G+  
Sbjct: 9   IASQGMNAEKLRVDVVANNIANQHSLQKADGSLFQASQVVTTAKSFAELVDKPQEMGIDS 68

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
            ++  +     + + PGHP A+  G V YP V+ + E   +   +R Y AN++ I  +H 
Sbjct: 69  VEVVPENLPPSKVYQPGHPAADKQGYVNYPGVSTIDEMTTLLRASRAYEANIKIINSAHS 128

Query: 124 MMTTTLDLL 132
           +    L + 
Sbjct: 129 LYLQALSIG 137


>gi|256020226|ref|ZP_05434091.1| flagellar basal body rod protein FlgC [Shigella sp. D9]
 gi|300817272|ref|ZP_07097490.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 107-1]
 gi|307313521|ref|ZP_07593142.1| flagellar basal-body rod protein FlgC [Escherichia coli W]
 gi|332281388|ref|ZP_08393801.1| flagellar basal body rod protein FlgC [Shigella sp. D9]
 gi|300530248|gb|EFK51310.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 107-1]
 gi|306906689|gb|EFN37200.1| flagellar basal-body rod protein FlgC [Escherichia coli W]
 gi|315059540|gb|ADT73867.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli W]
 gi|323379901|gb|ADX52169.1| flagellar basal-body rod protein FlgC [Escherichia coli KO11]
 gi|332103740|gb|EGJ07086.1| flagellar basal body rod protein FlgC [Shigella sp. D9]
          Length = 143

 Score = 88.8 bits (218), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 30/141 (21%), Positives = 55/141 (39%), Gaps = 10/141 (7%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG---- 57
                   I+ S +  Q+ R+  ++ N+ANA     +       R  +      H     
Sbjct: 1   MSFTDIYQISGSAMTAQTLRLNTVASNLANANAPASSEAQAYKARSPVFAAVYHHSLLAG 60

Query: 58  ------SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
                        +  +     V+ ++P  P+A+A+G V YP+VNV+ + ADM   +R +
Sbjct: 61  THRHAIDSASVQVQDVLQTGGAVKRYEPHSPLADANGDVWYPDVNVVEQMADMMSASRDF 120

Query: 112 MANLQTIKQSHDMMTTTLDLL 132
             N+  +     M  + L L 
Sbjct: 121 ETNVDVLNNVKSMQQSLLKLG 141


>gi|228938858|ref|ZP_04101458.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
           serovar berliner ATCC 10792]
 gi|228971739|ref|ZP_04132360.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
 gi|228978348|ref|ZP_04138725.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
           Bt407]
 gi|228781365|gb|EEM29566.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
           Bt407]
 gi|228787829|gb|EEM35787.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
 gi|228820707|gb|EEM66732.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
           serovar berliner ATCC 10792]
 gi|326939358|gb|AEA15254.1| flagellar basal body rod protein FlgC [Bacillus thuringiensis
           serovar chinensis CT-43]
          Length = 137

 Score = 88.8 bits (218), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 42/138 (30%), Positives = 70/138 (50%), Gaps = 10/138 (7%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---- 59
           +  + + + SGL      M++ S NI NA TT   PG+D Y R+++  E     +     
Sbjct: 1   MFQAINASGSGLTTARKWMEVTSNNIVNANTTA-APGADLYERRSVVLESNNSFASMLDG 59

Query: 60  ----GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
               GV++K I  D++     +DP HP AN  G V+YPN++V  E  ++  T ++Y AN 
Sbjct: 60  APTNGVKIKSIEADKTE-NLVYDPTHPHANEEGYVRYPNIDVTAEMTNVMVTQKMYEANT 118

Query: 116 QTIKQSHDMMTTTLDLLR 133
             +  +  M+   L++ R
Sbjct: 119 SVLNANKKMLDKDLEIGR 136


>gi|116619479|ref|YP_821635.1| flagellar basal-body rod protein FlgC [Candidatus Solibacter
           usitatus Ellin6076]
 gi|116222641|gb|ABJ81350.1| flagellar basal-body rod protein FlgC [Candidatus Solibacter
           usitatus Ellin6076]
          Length = 144

 Score = 88.8 bits (218), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 40/144 (27%), Positives = 65/144 (45%), Gaps = 12/144 (8%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS----------- 50
             L +   +  SG++ Q AR +++ EN+ANA TT    G    R+  +            
Sbjct: 1   MSLFSLLSVGASGMSAQRARAELLVENLANAETTRTPEGGPYRRKDVVFETTTTASPFAS 60

Query: 51  -FEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNR 109
            F   +    GV V  + VD S     + PGHP A+  G V +P +N   +  D+   +R
Sbjct: 61  VFNSELQSVNGVGVSDVVVDSSDPERRYMPGHPDADKDGYVAFPKINTAEDMVDLMGASR 120

Query: 110 LYMANLQTIKQSHDMMTTTLDLLR 133
            + AN+  +    DM+  ++DL R
Sbjct: 121 SFEANVAAMSAVKDMIQRSIDLAR 144


>gi|229096230|ref|ZP_04227203.1| Flagellar basal-body rod protein FlgC [Bacillus cereus Rock3-29]
 gi|229102343|ref|ZP_04233051.1| Flagellar basal-body rod protein FlgC [Bacillus cereus Rock3-28]
 gi|229115185|ref|ZP_04244595.1| Flagellar basal-body rod protein FlgC [Bacillus cereus Rock1-3]
 gi|228668325|gb|EEL23757.1| Flagellar basal-body rod protein FlgC [Bacillus cereus Rock1-3]
 gi|228680990|gb|EEL35159.1| Flagellar basal-body rod protein FlgC [Bacillus cereus Rock3-28]
 gi|228687190|gb|EEL41095.1| Flagellar basal-body rod protein FlgC [Bacillus cereus Rock3-29]
          Length = 137

 Score = 88.8 bits (218), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 41/138 (29%), Positives = 69/138 (50%), Gaps = 10/138 (7%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---- 59
           +  + + + SGL      M++ S NI NA TT   PG+D Y R+++  E     +     
Sbjct: 1   MFQAMNASGSGLTTARKWMEVTSNNIVNANTTA-APGADLYERRSVVLESNNSFASMLDG 59

Query: 60  ----GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
               GV++K I  D++     +DP HP AN  G V+YPN++V  E  ++    ++Y AN 
Sbjct: 60  APTNGVKIKSIEADKTE-NLVYDPTHPHANEEGYVRYPNIDVTAEMTNVMVAQKMYEANT 118

Query: 116 QTIKQSHDMMTTTLDLLR 133
             +  +  M+   L++ R
Sbjct: 119 SVLNANKKMLDKDLEIGR 136


>gi|229017032|ref|ZP_04173952.1| Flagellar basal-body rod protein FlgC [Bacillus cereus AH1273]
 gi|229023213|ref|ZP_04179724.1| Flagellar basal-body rod protein FlgC [Bacillus cereus AH1272]
 gi|228738138|gb|EEL88623.1| Flagellar basal-body rod protein FlgC [Bacillus cereus AH1272]
 gi|228744303|gb|EEL94385.1| Flagellar basal-body rod protein FlgC [Bacillus cereus AH1273]
          Length = 137

 Score = 88.8 bits (218), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 35/136 (25%), Positives = 56/136 (41%), Gaps = 6/136 (4%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKT--ISFEEVMHGSGGV 61
           +  + + + S L      M++ S NI NA TTG       +RR     S     +   G 
Sbjct: 1   MFQAINASGSALTTARKWMEVTSNNIVNANTTGAPDAEPYHRRSVVLESNNNFANMLEGA 60

Query: 62  RVKKI----GVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
               +              +DP HP AN  G V+YPN+NV  E  ++    ++Y AN   
Sbjct: 61  PANGVKIKSIETDRNENLVYDPTHPHANEEGYVRYPNINVTAEMTNVMVAQKMYEANTSV 120

Query: 118 IKQSHDMMTTTLDLLR 133
           +  +  M+   L++ R
Sbjct: 121 LNANKKMLDKDLEIGR 136


>gi|301646811|ref|ZP_07246663.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 146-1]
 gi|307136856|ref|ZP_07496212.1| flagellar basal body rod protein FlgC [Escherichia coli H736]
 gi|331640711|ref|ZP_08341858.1| flagellar basal-body rod protein FlgC [Escherichia coli H736]
 gi|301075004|gb|EFK89810.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 146-1]
 gi|315616829|gb|EFU97446.1| flagellar basal-body rod protein FlgC [Escherichia coli 3431]
 gi|331040085|gb|EGI12293.1| flagellar basal-body rod protein FlgC [Escherichia coli H736]
          Length = 143

 Score = 88.8 bits (218), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 30/141 (21%), Positives = 55/141 (39%), Gaps = 10/141 (7%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG---- 57
                   I+ S +  Q+ R+  ++ N+ANA     +       R  +      H     
Sbjct: 1   MSFTDIYQISGSAMTAQTIRLNTVASNLANAEAPAGSEAQAYKARSPVFAAVYHHSLLAG 60

Query: 58  ------SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
                        +  +     V+ ++P  P+A+A+G V YP+VNV+ + ADM   +R +
Sbjct: 61  THRHAIDAASVQVQDVLQTGGAVKRYEPHSPLADANGDVWYPDVNVVEQMADMMSASRDF 120

Query: 112 MANLQTIKQSHDMMTTTLDLL 132
             N+  +     M  + L L 
Sbjct: 121 ETNVDVLNNVKSMQQSLLKLG 141


>gi|114797235|ref|YP_759001.1| flagellar basal-body rod protein [Hyphomonas neptunium ATCC 15444]
 gi|114737409|gb|ABI75534.1| flagellar basal-body rod protein [Hyphomonas neptunium ATCC 15444]
          Length = 128

 Score = 88.4 bits (217), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 44/133 (33%), Positives = 74/133 (55%), Gaps = 6/133 (4%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M+ L A+   A +G+ +QS RM + +ENI+NA T G        R+  +  +  +     
Sbjct: 1   MNPLKATQQQAVAGMELQSRRMGVTAENISNADTPG------YKRKLLMVEQSQLSSGEQ 54

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
               ++ +D++    +++P HP+A+  G V   NV+++ E ADMRE NR Y ANL + +Q
Sbjct: 55  FMASRVQLDEAEAKRDYNPEHPMADGEGYVTLSNVSIVTEMADMREANRSYEANLNSFQQ 114

Query: 121 SHDMMTTTLDLLR 133
           +  M  + LD+LR
Sbjct: 115 ARSMYRSLLDILR 127


>gi|213026534|ref|ZP_03340981.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Typhi str. 404ty]
          Length = 108

 Score = 88.4 bits (217), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 32/108 (29%), Positives = 56/108 (51%), Gaps = 2/108 (1%)

Query: 28  NIANARTTGDTPGSDPYRRKTISFEEVM--HGSGGVRVKKIGVDQSTFVEEFDPGHPVAN 85
           N+ANA +     G     ++ +   +      +GGV+V  +   Q+     ++PG+P+A+
Sbjct: 1   NLANADSVTGPDGQPYRAKQVVFQVDAAPGQATGGVKVASVIESQAPEKLVYEPGNPLAD 60

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           A+G VK PNV+V+ E  +    +R Y AN++ +     MM  TL L +
Sbjct: 61  ANGYVKMPNVDVVGEMVNTMSASRSYQANIEVLNTVKSMMLKTLTLGQ 108


>gi|289433989|ref|YP_003463861.1| flagellar basal-body rod protein FlgC [Listeria seeligeri serovar
           1/2b str. SLCC3954]
 gi|315301963|ref|ZP_07872959.1| flagellar basal-body rod protein FlgC [Listeria ivanovii FSL
           F6-596]
 gi|289170233|emb|CBH26773.1| flagellar basal-body rod protein FlgC [Listeria seeligeri serovar
           1/2b str. SLCC3954]
 gi|313629670|gb|EFR97807.1| flagellar basal-body rod protein FlgC [Listeria ivanovii FSL
           F6-596]
 gi|313639044|gb|EFS04033.1| flagellar basal-body rod protein FlgC [Listeria seeligeri FSL
           S4-171]
          Length = 136

 Score = 88.4 bits (217), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 39/136 (28%), Positives = 67/136 (49%), Gaps = 7/136 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE------VMHG 57
           +    + + S L      M++ S NIANA ++   PG  P+ RK +   E       + G
Sbjct: 1   MFEGINTSGSALNAAKQWMEVSSNNIANADSSA-APGETPFLRKRVVMSEISPFETALTG 59

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           + GV+V +I  D  +    +DP HP AN +G V Y NV++  E  ++    ++Y AN   
Sbjct: 60  TKGVKVSEISSDTGSVKRVYDPTHPNANEAGYVNYANVDMTAEMTNLMVGQKMYAANTSA 119

Query: 118 IKQSHDMMTTTLDLLR 133
           ++ +  MM   L++ +
Sbjct: 120 LQANEKMMEKDLEIGK 135


>gi|196044999|ref|ZP_03112232.1| flagellar basal-body rod protein FlgC [Bacillus cereus 03BB108]
 gi|225863603|ref|YP_002748981.1| flagellar basal-body rod protein FlgC [Bacillus cereus 03BB102]
 gi|229183936|ref|ZP_04311152.1| Flagellar basal-body rod protein FlgC [Bacillus cereus BGSC 6E1]
 gi|196024001|gb|EDX62675.1| flagellar basal-body rod protein FlgC [Bacillus cereus 03BB108]
 gi|225788684|gb|ACO28901.1| flagellar basal-body rod protein FlgC [Bacillus cereus 03BB102]
 gi|228599588|gb|EEK57192.1| Flagellar basal-body rod protein FlgC [Bacillus cereus BGSC 6E1]
 gi|324325762|gb|ADY21022.1| flagellar basal body rod protein FlgC [Bacillus thuringiensis
           serovar finitimus YBT-020]
          Length = 137

 Score = 88.0 bits (216), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 38/137 (27%), Positives = 63/137 (45%), Gaps = 8/137 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKT-------ISFEEVMH 56
           +  + + + SGL      M++ S NI NA TT     +   RR          +      
Sbjct: 1   MFQAINASGSGLTTARKWMEVTSNNIVNANTTAAPGANLYERRSVVLESNNSFANMLDSA 60

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
            + GV++K I  D++     +DP HP AN  G V+YPNV+V  E  ++    ++Y AN  
Sbjct: 61  PTNGVKIKSIEADKTE-NLVYDPTHPHANEEGYVRYPNVDVTAEMTNVMVAQKMYEANTS 119

Query: 117 TIKQSHDMMTTTLDLLR 133
            +  +  M+   L++ R
Sbjct: 120 VLNANKKMLDKDLEIGR 136


>gi|27904802|ref|NP_777928.1| flagellar basal-body rod protein FlgC [Buchnera aphidicola str. Bp
           (Baizongia pistaciae)]
 gi|46395818|sp|Q89AH9|FLGC_BUCBP RecName: Full=Flagellar basal-body rod protein flgC
 gi|27904200|gb|AAO27033.1| flagellar basal-body rod protein FlgC [Buchnera aphidicola str. Bp
           (Baizongia pistaciae)]
          Length = 136

 Score = 88.0 bits (216), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 31/136 (22%), Positives = 65/136 (47%), Gaps = 4/136 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDP----YRRKTISFEEVMHG 57
             L    +I+ S L  QS +M + ++N+AN+ +     G+                  + 
Sbjct: 1   MSLFNIFNISGSALETQSKKMDVHAKNLANSDSYIYKNGTLYPYVARIPMLQFDPISENN 60

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
            GGV++  +  D S+    ++P  P+A+++G  K  NV+++ ET +    ++ Y  NL+ 
Sbjct: 61  VGGVKMHTVAGDTSSLKSIYNPNSPIADSNGYSKVSNVDIMSETINAITASKNYQTNLEI 120

Query: 118 IKQSHDMMTTTLDLLR 133
           +  + +M+  TL + +
Sbjct: 121 LNTTKNMIMKTLTIGQ 136


>gi|117928047|ref|YP_872598.1| hypothetical protein Acel_0839 [Acidothermus cellulolyticus 11B]
 gi|117648510|gb|ABK52612.1| protein of unknown function DUF1078 domain protein [Acidothermus
           cellulolyticus 11B]
          Length = 130

 Score = 88.0 bits (216), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 35/133 (26%), Positives = 56/133 (42%), Gaps = 3/133 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M  L  +  I+ + L V    M  I++N++NA             R            GG
Sbjct: 1   MTQLFDTIGISGTALTVNRKWMDAIADNVSNANDVVPGDQPVFAPRYVQVQAA---PGGG 57

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V V  I    S  +E +DP +P A+A G V++ +V++  +   M    R Y ANL  + +
Sbjct: 58  VEVVAIRYGSSAGIESYDPTNPQADARGYVRHADVDMTSQMTQMIMAQRSYEANLAIMTR 117

Query: 121 SHDMMTTTLDLLR 133
           + D     L L +
Sbjct: 118 ATDAYKQALQLGK 130


>gi|330501135|ref|YP_004378004.1| flagellar basal body rod protein FlgC [Pseudomonas mendocina NK-01]
 gi|328915421|gb|AEB56252.1| flagellar basal body rod protein FlgC [Pseudomonas mendocina NK-01]
          Length = 142

 Score = 87.6 bits (215), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 27/142 (19%), Positives = 55/142 (38%), Gaps = 9/142 (6%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--- 58
               +   IA S +  Q+ R+  ++ N+ANA +   +       RK +      +     
Sbjct: 1   MAFDSIYRIAGSSMNAQTVRLNTVASNLANADSAAASAEDVYQARKPVFAAVYNNDQLTR 60

Query: 59  ------GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
                   V+V  +       V  ++P +P+A+  G V Y +++ + E  DM    R + 
Sbjct: 61  GVGMGGAHVQVLDVVTAGREPVRRYEPDNPLADDKGYVFYADIDQIEEMTDMMSATRSFE 120

Query: 113 ANLQTIKQSHDMMTTTLDLLRD 134
            +++ + +   M    L L   
Sbjct: 121 TSVEVLNRLKSMQQGLLKLGES 142


>gi|228984828|ref|ZP_04145000.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
           serovar tochigiensis BGSC 4Y1]
 gi|228775026|gb|EEM23420.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
           serovar tochigiensis BGSC 4Y1]
          Length = 137

 Score = 87.6 bits (215), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 37/137 (27%), Positives = 61/137 (44%), Gaps = 8/137 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKT-------ISFEEVMH 56
           +  + + + SGL      M++ S NI NA TT         RR          +      
Sbjct: 1   MFQAINASGSGLTTARKWMEVTSNNIVNANTTAAPGADLYERRSVVLESNNSFANMLDRS 60

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
            + GV +K I  D++     +DP HP AN  G V+YPN++V  E  ++    ++Y AN  
Sbjct: 61  PANGVNIKSIEADKTE-NLVYDPTHPHANEEGYVRYPNIDVTAEMTNVMVAQKMYEANTS 119

Query: 117 TIKQSHDMMTTTLDLLR 133
            +  +  M+   L++ R
Sbjct: 120 VLNANKKMLDKDLEIGR 136


>gi|146305248|ref|YP_001185713.1| flagellar basal body rod protein FlgC [Pseudomonas mendocina ymp]
 gi|145573449|gb|ABP82981.1| flagellar basal-body rod protein FlgC [Pseudomonas mendocina ymp]
          Length = 142

 Score = 87.2 bits (214), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 27/142 (19%), Positives = 54/142 (38%), Gaps = 9/142 (6%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG---- 57
               +   IA S +  Q+ R+  ++ N+ANA +           RK +      +     
Sbjct: 1   MAFDSIYRIAGSSMNAQTVRLNTVASNLANADSAAAKAEDVYQARKPVFAAVYNNDELTR 60

Query: 58  -----SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
                   V+V  +       V  ++P +P+A+  G V Y +++ + E  DM    R + 
Sbjct: 61  GVGMGGAHVQVLDVVTAGREPVRRYEPDNPLADDQGYVFYADIDQIEEMTDMMSATRSFE 120

Query: 113 ANLQTIKQSHDMMTTTLDLLRD 134
            +++ + +   M    L L   
Sbjct: 121 TSVEVLNRLKSMQQGLLKLGES 142


>gi|229160708|ref|ZP_04288700.1| Flagellar basal-body rod protein FlgC [Bacillus cereus R309803]
 gi|228622723|gb|EEK79557.1| Flagellar basal-body rod protein FlgC [Bacillus cereus R309803]
          Length = 137

 Score = 87.2 bits (214), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 37/137 (27%), Positives = 63/137 (45%), Gaps = 8/137 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKT-------ISFEEVMH 56
           +  + + + SGL      M++ S NI NA TT +       RR          +      
Sbjct: 1   MFQAINASGSGLTTARKWMEVTSNNIVNANTTAEPGADLYERRSVVLESNNSFANMLNST 60

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
            + GV++K I  D++     +DP HP AN  G V+YPN++V  E  ++    ++Y AN  
Sbjct: 61  PANGVKIKSIEADKAE-NLVYDPTHPHANEEGYVRYPNIDVTAEMTNVMIAQKMYEANTS 119

Query: 117 TIKQSHDMMTTTLDLLR 133
            +  +  M+   L++ R
Sbjct: 120 VLNANKKMLDKDLEIGR 136


>gi|254443396|ref|ZP_05056872.1| flagellar basal-body rod protein FlgC [Verrucomicrobiae bacterium
           DG1235]
 gi|198257704|gb|EDY82012.1| flagellar basal-body rod protein FlgC [Verrucomicrobiae bacterium
           DG1235]
          Length = 123

 Score = 86.9 bits (213), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 45/123 (36%), Positives = 65/123 (52%), Gaps = 12/123 (9%)

Query: 22  MQIISENIANARTTGDTPGSDPYRRKTISFEEV-----------MHGSGGVRVKKIGVDQ 70
           M II +NIANA TT   P   PY+R+T+ FE             M  + GV V+ +  D+
Sbjct: 1   MDIIGQNIANAHTTRG-PDGMPYQRQTVQFEAKLMELGRDQNGKMQTAQGVNVRDVVTDE 59

Query: 71  STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           +     F+PGHP A+  G+V+ PNVN+  E  D+   +R Y ANLQ ++ S  M    L 
Sbjct: 60  TNGPLVFNPGHPDADEKGMVQLPNVNLTHEMVDLISASRSYEANLQVVRTSKQMAQQALR 119

Query: 131 LLR 133
           + +
Sbjct: 120 IGQ 122


>gi|260768785|ref|ZP_05877719.1| flagellar basal-body rod protein FlgC [Vibrio furnissii CIP 102972]
 gi|260616815|gb|EEX42000.1| flagellar basal-body rod protein FlgC [Vibrio furnissii CIP 102972]
 gi|315180488|gb|ADT87402.1| flagellar basal-body rod protein C [Vibrio furnissii NCTC 11218]
          Length = 140

 Score = 86.9 bits (213), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 31/137 (22%), Positives = 54/137 (39%), Gaps = 7/137 (5%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
                    + S +  Q+ R+  IS N+ANA +    P       K +        S   
Sbjct: 1   MSFNGIYETSGSAMMAQTIRLNTISSNLANADSVASNPNDVYKPLKPVFTSVFNSLSAQS 60

Query: 62  -------RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
                  R+  +          ++PGHP+AN  G V +  +NV+ E ADM  + R + AN
Sbjct: 61  ASGSVPVRIADVIEVSGMSESRYEPGHPLANNEGYVYHSGINVVNEMADMMSSTRSFEAN 120

Query: 115 LQTIKQSHDMMTTTLDL 131
           ++ +     M  + + +
Sbjct: 121 VEVLNNVKSMQQSLMRI 137


>gi|50954402|ref|YP_061690.1| flagellar basal-body rod protein [Leifsonia xyli subsp. xyli str.
           CTCB07]
 gi|50950884|gb|AAT88585.1| flagellar basal-body rod protein [Leifsonia xyli subsp. xyli str.
           CTCB07]
          Length = 132

 Score = 86.9 bits (213), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 28/133 (21%), Positives = 56/133 (42%), Gaps = 2/133 (1%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M   + +  IA +G+ +    +  I +N+AN      T  ++P  ++     +    SGG
Sbjct: 1   MTVQLDAIGIAGTGMNLNQKWLDAIGDNLANIDD--TTNRANPAFQERFVLAQADSDSGG 58

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V V       +     +    P A+A G V+   +++ V+  ++    R Y AN  T+  
Sbjct: 59  VAVAGTPFGSAAGRLVYSLRDPNADAQGYVRGTGIDLSVQMTNLIMAQRAYQANANTVSS 118

Query: 121 SHDMMTTTLDLLR 133
           +  M  + L + +
Sbjct: 119 ARYMYQSALQIGQ 131


>gi|171321209|ref|ZP_02910179.1| flagellar basal-body rod protein FlgC [Burkholderia ambifaria
           MEX-5]
 gi|171093519|gb|EDT38689.1| flagellar basal-body rod protein FlgC [Burkholderia ambifaria
           MEX-5]
          Length = 149

 Score = 86.5 bits (212), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 40/149 (26%), Positives = 60/149 (40%), Gaps = 20/149 (13%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM----- 55
           M        IA SGL V+  R+++I+ N ANA      PG++PYR   +     +     
Sbjct: 1   MSD--TIFAIARSGLDVERQRLELIARNFANA-GASTAPGAEPYRPLRLVSGAQLEPAFP 57

Query: 56  ------------HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETAD 103
                           G R   I    +      D  HP A+A G+V+YP ++   E A 
Sbjct: 58  EALRRAPGGISTDRPLGTRAIGIDALDTPPRVMRDTAHPHADAQGLVRYPGLDHAAEMAL 117

Query: 104 MRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           + +T R Y AN+     +  M    LD+ 
Sbjct: 118 LVQTLRTYEANVVMFNAARSMYLRALDIG 146


>gi|323341388|ref|ZP_08081632.1| flagellar basal-body rod protein FlgC [Lactobacillus ruminis ATCC
           25644]
 gi|323091265|gb|EFZ33893.1| flagellar basal-body rod protein FlgC [Lactobacillus ruminis ATCC
           25644]
          Length = 139

 Score = 86.5 bits (212), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 37/139 (26%), Positives = 68/139 (48%), Gaps = 6/139 (4%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             +     I  SGL+++  ++ + S NIAN  TT    G    ++     E +    G  
Sbjct: 1   MSIFNGLQINASGLSLERMKLDVASTNIANVNTTRTAEGGPYKKKTVEFSENLRQAQGTN 60

Query: 62  RVKKIGV------DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
           ++   GV      + +T    +DP +P A+A+G V+ PNVN+  E  DM +  R Y AN+
Sbjct: 61  KITSAGVKVTNIAEDNTTKLTYDPTNPDADANGYVEMPNVNMADEMVDMIQAMRTYEANV 120

Query: 116 QTIKQSHDMMTTTLDLLRD 134
            + + + +++   L++ +D
Sbjct: 121 SSTEANKNILKKALEISKD 139


>gi|22127330|ref|NP_670753.1| flagellar basal body rod protein FlgC [Yersinia pestis KIM 10]
 gi|45442794|ref|NP_994333.1| flagellar basal body rod protein FlgC [Yersinia pestis biovar
           Microtus str. 91001]
 gi|51597639|ref|YP_071830.1| flagellar basal body rod protein FlgC [Yersinia pseudotuberculosis
           IP 32953]
 gi|108809057|ref|YP_652973.1| flagellar basal body rod protein FlgC [Yersinia pestis Antiqua]
 gi|108810746|ref|YP_646513.1| flagellar basal body rod protein FlgC [Yersinia pestis Nepal516]
 gi|145597815|ref|YP_001161891.1| flagellar basal body rod protein FlgC [Yersinia pestis Pestoides F]
 gi|150260251|ref|ZP_01916979.1| lateral flagellar rod protein [Yersinia pestis CA88-4125]
 gi|162418952|ref|YP_001604849.1| flagellar basal body rod protein FlgC [Yersinia pestis Angola]
 gi|165924966|ref|ZP_02220798.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165939065|ref|ZP_02227617.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|166008997|ref|ZP_02229895.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166212219|ref|ZP_02238254.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|167398642|ref|ZP_02304166.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167418994|ref|ZP_02310747.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167425145|ref|ZP_02316898.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|167466343|ref|ZP_02331047.1| flagellar basal-body rod protein FlgC [Yersinia pestis FV-1]
 gi|170022969|ref|YP_001719474.1| flagellar basal body rod protein FlgC [Yersinia pseudotuberculosis
           YPIII]
 gi|186896773|ref|YP_001873885.1| flagellar basal body rod protein FlgC [Yersinia pseudotuberculosis
           PB1/+]
 gi|218927910|ref|YP_002345785.1| flagellar basal body rod protein FlgC [Yersinia pestis CO92]
 gi|229837406|ref|ZP_04457569.1| Flagellar basal-body rod protein flgC [Yersinia pestis Pestoides A]
 gi|229840619|ref|ZP_04460778.1| Flagellar basal-body rod protein flgC [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229842830|ref|ZP_04462982.1| Flagellar basal-body rod protein flgC [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229900943|ref|ZP_04516067.1| Flagellar basal-body rod protein flgC [Yersinia pestis Nepal516]
 gi|270487675|ref|ZP_06204749.1| flagellar basal-body rod protein FlgC [Yersinia pestis KIM D27]
 gi|294502786|ref|YP_003566848.1| flagellar basal body rod protein [Yersinia pestis Z176003]
 gi|21960411|gb|AAM87004.1|AE013948_12 flagellar biosynthesis protein, cell-proximal portion of basal-body
           rod [Yersinia pestis KIM 10]
 gi|45437660|gb|AAS63210.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Microtus str. 91001]
 gi|51590921|emb|CAH22577.1| Putative flagellar basal-body rod protein [Yersinia
           pseudotuberculosis IP 32953]
 gi|108774394|gb|ABG16913.1| flagellar basal-body rod protein [Yersinia pestis Nepal516]
 gi|108780970|gb|ABG15028.1| putative flagellar basal-body rod protein [Yersinia pestis Antiqua]
 gi|115346521|emb|CAL19397.1| putative flagellar basal-body rod protein [Yersinia pestis CO92]
 gi|145209511|gb|ABP38918.1| flagellar basal-body rod protein [Yersinia pestis Pestoides F]
 gi|149289659|gb|EDM39736.1| lateral flagellar rod protein [Yersinia pestis CA88-4125]
 gi|162351767|gb|ABX85715.1| flagellar basal-body rod protein FlgC [Yersinia pestis Angola]
 gi|165913021|gb|EDR31646.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|165923166|gb|EDR40317.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165992336|gb|EDR44637.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166206965|gb|EDR51445.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|166962988|gb|EDR59009.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167051146|gb|EDR62554.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167055908|gb|EDR65689.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|169749503|gb|ACA67021.1| flagellar basal-body rod protein FlgC [Yersinia pseudotuberculosis
           YPIII]
 gi|186699799|gb|ACC90428.1| flagellar basal-body rod protein FlgC [Yersinia pseudotuberculosis
           PB1/+]
 gi|229682282|gb|EEO78374.1| Flagellar basal-body rod protein flgC [Yersinia pestis Nepal516]
 gi|229690097|gb|EEO82154.1| Flagellar basal-body rod protein flgC [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229696985|gb|EEO87032.1| Flagellar basal-body rod protein flgC [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229705529|gb|EEO91539.1| Flagellar basal-body rod protein flgC [Yersinia pestis Pestoides A]
 gi|262360818|gb|ACY57539.1| flagellar basal body rod protein [Yersinia pestis D106004]
 gi|270336179|gb|EFA46956.1| flagellar basal-body rod protein FlgC [Yersinia pestis KIM D27]
 gi|294353245|gb|ADE63586.1| flagellar basal body rod protein [Yersinia pestis Z176003]
 gi|320016713|gb|ADW00285.1| Flagellar basal-body rod protein flgC [Yersinia pestis biovar
           Medievalis str. Harbin 35]
          Length = 141

 Score = 86.5 bits (212), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 33/139 (23%), Positives = 56/139 (40%), Gaps = 8/139 (5%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
                   +A S +  Q+ R+  I+ N+ANA +   +  +    R  +        +   
Sbjct: 1   MSFNQIYRVAGSAMTAQTIRLNTIASNLANAESPAASAATVYKARSPVFSAVYSARTAAD 60

Query: 62  RVKK--------IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
                         V+    V+ ++P HP+AN  G V YP VNV+ E ADM   +R +  
Sbjct: 61  PRGVQSAQVQVLDVVEVGGSVQRYEPNHPMANPQGYVFYPAVNVVSEMADMMSASRSFET 120

Query: 114 NLQTIKQSHDMMTTTLDLL 132
           N++ +     M  + L L 
Sbjct: 121 NVEVLNSVKSMQQSVLKLG 139


>gi|153949008|ref|YP_001399632.1| flagellar basal body rod protein FlgC [Yersinia pseudotuberculosis
           IP 31758]
 gi|152960503|gb|ABS47964.1| flagellar basal-body rod protein FlgC [Yersinia pseudotuberculosis
           IP 31758]
          Length = 141

 Score = 86.1 bits (211), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 34/139 (24%), Positives = 60/139 (43%), Gaps = 8/139 (5%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE----EVMHG 57
                   +A S +  Q+ R+  I+ N+ANA +   +  +    R  +            
Sbjct: 1   MSFNQIYRVAGSAMTAQTIRLNTIASNLANAESPAASAATVYKARSPVFSAVYSARAETE 60

Query: 58  SGGVRVKKI----GVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
             G++  ++     V+    V+ ++P HP+AN  G V YP VNV+ E ADM   +R +  
Sbjct: 61  PQGIQSAQVQVLDVVEVGGSVQRYEPNHPMANPQGYVFYPAVNVVSEMADMMSASRSFET 120

Query: 114 NLQTIKQSHDMMTTTLDLL 132
           N++ +     M  + L L 
Sbjct: 121 NVEVLNSVKSMQQSVLKLG 139


>gi|154175290|ref|YP_001408541.1| flagellar basal body rod protein FlgC [Campylobacter curvus 525.92]
 gi|112803036|gb|EAU00380.1| flagellar basal-body rod protein FlgC [Campylobacter curvus 525.92]
          Length = 167

 Score = 86.1 bits (211), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 50/163 (30%), Positives = 74/163 (45%), Gaps = 32/163 (19%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF--------E 52
           M YL     I+  GL+ Q  RM +IS NIANA+TT    G    R++ I           
Sbjct: 1   MSYL-NDFDISGYGLSAQRFRMNVISSNIANAQTTRTAEGGPYRRQEVIFKAFDFDKILN 59

Query: 53  EVMHGSGGVRVKKIGVDQS-----------------------TFVEEFDPGHPVANASGI 89
           E M  SGG+   +  +D                          F+ ++DP HP ANA+G 
Sbjct: 60  EEMKNSGGLLEYENPLDDPSSPKNAHPSLMSVVVDKVVRDDKDFMLKYDPSHPDANANGY 119

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           V +PN+N ++E AD+ E  R Y AN+   + +  +  + + LL
Sbjct: 120 VAFPNINPVIEMADLVEATRAYQANVAAFQSAKMIAQSAITLL 162


>gi|239815254|ref|YP_002944164.1| flagellar basal-body rod protein FlgC [Variovorax paradoxus S110]
 gi|239801831|gb|ACS18898.1| flagellar basal-body rod protein FlgC [Variovorax paradoxus S110]
          Length = 153

 Score = 85.7 bits (210), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 58/152 (38%), Gaps = 19/152 (12%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE--------- 52
                S  I+  G+ ++  R+ + + N+ANA T     G+     + I+           
Sbjct: 1   MDYTQSFAISAIGMNIERTRVDVAALNLANANTVQGVGGTSYQPLRVIAEARSPGGEGAA 60

Query: 53  ----------EVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETA 102
                     +    + G  + ++    +     ++PGHP+AN SG V Y  V+   E  
Sbjct: 61  AFGALVSQGLDAADAAQGSPLVRVVPTNAPPRLVYEPGHPLANESGYVAYAAVDTATEMV 120

Query: 103 DMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
            M    R Y AN+  +  +  +    LD+  +
Sbjct: 121 SMMSATRAYEANVSAMNTARTLALRALDIGSN 152


>gi|225871925|ref|YP_002753379.1| flagellar basal-body rod protein FlgC [Acidobacterium capsulatum
           ATCC 51196]
 gi|225793067|gb|ACO33157.1| flagellar basal-body rod protein FlgC [Acidobacterium capsulatum
           ATCC 51196]
          Length = 165

 Score = 85.3 bits (209), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 36/164 (21%), Positives = 68/164 (41%), Gaps = 32/164 (19%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--- 58
             L+    ++ S L  +  R ++++ N+ANA TT    G    R++ +   +        
Sbjct: 1   MNLLGLLDVSGSALEAERIRAEVVAANMANANTTRTASGGPYLRKEVVFSSQAPEPGAFA 60

Query: 59  -----------------------------GGVRVKKIGVDQSTFVEEFDPGHPVANASGI 89
                                        GGVRV  +  D++  ++ +DP HP A+  G 
Sbjct: 61  NQFADQFAGGAEAPVSLQAMAGGMAEPQVGGVRVSAVLTDKNAILKRYDPSHPDADKQGY 120

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           V YP +N + E  D+    R Y  N   ++ + +M+ + L++L+
Sbjct: 121 VSYPEINPVTEMVDLMSATRSYGLNSSAVQATKNMINSALEILK 164


>gi|87307389|ref|ZP_01089534.1| flagellar basal-body rod potein FlgC [Blastopirellula marina DSM
           3645]
 gi|87290129|gb|EAQ82018.1| flagellar basal-body rod potein FlgC [Blastopirellula marina DSM
           3645]
          Length = 140

 Score = 85.3 bits (209), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 38/139 (27%), Positives = 68/139 (48%), Gaps = 10/139 (7%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGS-DPYRRKTISFEE-----VMHG 57
           +  +  I++S +  Q  R+  ++ NIAN  +  D  G   PYR + + F+         G
Sbjct: 1   MNGALDISSSAMVAQRIRLNAVTSNIANMSSLRDESGDIAPYRARHVIFQTDNAIRAQGG 60

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANAS----GIVKYPNVNVLVETADMRETNRLYMA 113
           + GV+V  I  +Q   +  + P HP+A       G V +P VN++ +  D  E +R Y A
Sbjct: 61  AAGVKVSSIEEEQVEPIYRYQPTHPLAITEGKYKGYVAHPRVNMVEQMVDALEASRAYEA 120

Query: 114 NLQTIKQSHDMMTTTLDLL 132
           N+  ++ S ++   +L +L
Sbjct: 121 NIGVVEISKNLAAQSLRIL 139


>gi|218506433|ref|ZP_03504311.1| flagellar basal body rod protein FlgC [Rhizobium etli Brasil 5]
          Length = 102

 Score = 85.3 bits (209), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 62/101 (61%), Positives = 75/101 (74%), Gaps = 3/101 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD L A+  IA SGL  QS R++I+SENIANAR+TGDTPG+DPYRRKTI+F + M    G
Sbjct: 1   MDPLSAAMKIAGSGLEAQSTRLRIVSENIANARSTGDTPGADPYRRKTITFGQQMDHVSG 60

Query: 61  ---VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVL 98
              V VKK+GVD+  F  EFDP +P A+A G+VK PNVNVL
Sbjct: 61  VETVNVKKVGVDEGDFSTEFDPSNPAADARGVVKLPNVNVL 101


>gi|225569965|ref|ZP_03778990.1| hypothetical protein CLOHYLEM_06060 [Clostridium hylemonae DSM
           15053]
 gi|225161435|gb|EEG74054.1| hypothetical protein CLOHYLEM_06060 [Clostridium hylemonae DSM
           15053]
          Length = 134

 Score = 84.9 bits (208), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 36/134 (26%), Positives = 53/134 (39%), Gaps = 15/134 (11%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRK---------------TISFEEVMHGSG 59
           +  Q  R+ I SENIAN  TT    G+   R+                     +     G
Sbjct: 1   MTAQRLRLDIASENIANIETTRTEDGTPYRRKMVVLESRKENFRSVLGRAMSGQNSANRG 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           GV    I  D +      DP HP A+ +G V+ PNV+++ ET D     R Y AN+    
Sbjct: 61  GVAAAAIIDDDTELKAVLDPEHPDADENGYVRMPNVDMIKETTDAMAATRSYEANITAFN 120

Query: 120 QSHDMMTTTLDLLR 133
               M    +++ +
Sbjct: 121 AVKLMAQKAMEIGK 134


>gi|307823529|ref|ZP_07653758.1| flagellar basal-body rod protein FlgC [Methylobacter tundripaludum
           SV96]
 gi|307735514|gb|EFO06362.1| flagellar basal-body rod protein FlgC [Methylobacter tundripaludum
           SV96]
          Length = 138

 Score = 84.9 bits (208), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 37/135 (27%), Positives = 64/135 (47%), Gaps = 6/135 (4%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV------MHGS 58
            +   IA SG+  QS R+ +++ NI+NA +   +       R+ +   E+       + +
Sbjct: 4   SSIFDIAGSGMNAQSLRLNLVASNISNANSVSSSAADVYKSRQPVFAAELDKVINKQNAT 63

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
             V V  +   Q   V E+ P HP+AN+ G +   NVN + E A+M   +R Y  N+  +
Sbjct: 64  SKVNVLGVVEGQDAPVMEYAPNHPMANSDGYIFKSNVNTVEEMANMMSASRSYQNNVDVL 123

Query: 119 KQSHDMMTTTLDLLR 133
             +  MM  TL + +
Sbjct: 124 NTAKQMMLQTLKMGQ 138


>gi|315125982|ref|YP_004067985.1| LfgC [Pseudoalteromonas sp. SM9913]
 gi|315014496|gb|ADT67834.1| LfgC [Pseudoalteromonas sp. SM9913]
          Length = 138

 Score = 84.9 bits (208), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 34/138 (24%), Positives = 58/138 (42%), Gaps = 6/138 (4%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS------FEEVM 55
               +    + S +  Q  R+  I+ N+ANA T   +        K +        ++  
Sbjct: 1   MSFNSIYDASGSAMRAQVIRLDTIASNLANADTAAGSEADAYKALKPVFSALYKQTQDSQ 60

Query: 56  HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
             S  V V  I        + ++P +P+AN  G V Y NVN L E ADM   +R Y  ++
Sbjct: 61  SISASVDVLGITESNRAVEQRYEPNNPIANNDGYVFYSNVNALEEMADMMSASRSYQTSV 120

Query: 116 QTIKQSHDMMTTTLDLLR 133
           + + + + M  + L L +
Sbjct: 121 EVMGRVNSMQQSILKLGQ 138


>gi|149908761|ref|ZP_01897422.1| LfgC [Moritella sp. PE36]
 gi|149808303|gb|EDM68242.1| LfgC [Moritella sp. PE36]
          Length = 140

 Score = 84.2 bits (206), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 30/139 (21%), Positives = 57/139 (41%), Gaps = 7/139 (5%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
                   IA SG+  Q+ R+  ++ N+AN  +   +     +  K I           +
Sbjct: 1   MSFNNIYEIAGSGMRSQTLRLNTVASNLANVNSAASSEKEAYHALKPIFSTIYQTSQETL 60

Query: 62  RVKK-------IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
            V         +   Q      ++P + +AN  G V Y NVN + E ADM   +R + ++
Sbjct: 61  EVTGASVNMLGVTRSQQAIERRYEPENTLANNDGYVFYSNVNAVAEMADMMSASRSFESS 120

Query: 115 LQTIKQSHDMMTTTLDLLR 133
            + +++ + M  + L L +
Sbjct: 121 AEVMRRVNSMQQSLLRLGQ 139


>gi|268316361|ref|YP_003290080.1| flagellar basal-body rod protein FlgC [Rhodothermus marinus DSM
           4252]
 gi|262333895|gb|ACY47692.1| flagellar basal-body rod protein FlgC [Rhodothermus marinus DSM
           4252]
          Length = 166

 Score = 84.2 bits (206), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 40/160 (25%), Positives = 65/160 (40%), Gaps = 32/160 (20%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH------- 56
           + +    A  GL  Q   M   +ENIANA TT    G+    ++ +     +        
Sbjct: 7   IFSFFRTAARGLEAQRMAMSAATENIANAATTRTDEGTPYAIKRAVHTNPEVRNRRFYEL 66

Query: 57  -------------------------GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVK 91
                                        +  +    +      E+DP HP A+A+G V 
Sbjct: 67  LSRLRTAPRTQDPRHSSSPSLLTRLPEAELGPETTIAETLRLRYEYDPTHPHADANGYVA 126

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           YP+VNV+ E A +   NR+Y ANL TI+ + +++  TL++
Sbjct: 127 YPDVNVVEEMAHLISANRIYEANLSTIQAAKEIVKRTLEI 166


>gi|255022067|ref|ZP_05294073.1| flagellar basal-body rod protein FlgC [Acidithiobacillus caldus
           ATCC 51756]
 gi|254968553|gb|EET26109.1| flagellar basal-body rod protein FlgC [Acidithiobacillus caldus
           ATCC 51756]
          Length = 141

 Score = 84.2 bits (206), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 32/136 (23%), Positives = 61/136 (44%), Gaps = 6/136 (4%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG- 60
             +I +  +  + ++ Q+AR+  +  N+ANA +   + G+    R+ +        + G 
Sbjct: 6   MSIINALSVTGAAMSAQNARLGAVVSNLANANSVTSSTGTPYKAREVVFEAVPDGTASGG 65

Query: 61  -----VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
                VRV  +   Q+     ++PG+P+AN +G V+  NVN +    DM   +R Y  ++
Sbjct: 66  IPLESVRVAGVVQSQAPSPLLYEPGNPLANKAGYVRGSNVNPIESMVDMLSASRAYQDDV 125

Query: 116 QTIKQSHDMMTTTLDL 131
                   +   TL L
Sbjct: 126 TAANVLKTIAMKTLSL 141


>gi|313634361|gb|EFS00958.1| flagellar basal-body rod protein FlgC [Listeria seeligeri FSL
           N1-067]
          Length = 138

 Score = 83.0 bits (203), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 39/138 (28%), Positives = 66/138 (47%), Gaps = 9/138 (6%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE------VMHG 57
           +    + + S L      M++ S NIANA ++   PG  P+ RK +   E       + G
Sbjct: 1   MFEGINTSGSALNAAKQWMEVSSNNIANADSSA-APGETPFLRKRVVMSEISPFETALTG 59

Query: 58  SGGVRVKKIGVDQS--TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
           + GV+V +I  D         +DP HP AN +G V Y NV++  E  ++    ++Y AN 
Sbjct: 60  TKGVKVSEISSDTGSVNVKRVYDPTHPNANEAGYVNYANVDMTAEMTNLMVGQKMYAANT 119

Query: 116 QTIKQSHDMMTTTLDLLR 133
             ++ +  MM   L++ +
Sbjct: 120 SALQANEKMMEKDLEIGK 137


>gi|119947179|ref|YP_944859.1| flagellar basal-body rod protein FlgC [Psychromonas ingrahamii 37]
 gi|119865783|gb|ABM05260.1| flagellar basal-body rod protein FlgC [Psychromonas ingrahamii 37]
          Length = 142

 Score = 83.0 bits (203), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 32/140 (22%), Positives = 56/140 (40%), Gaps = 9/140 (6%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
                    A S +  Q+ R+  IS N+ANA +            K I      + + G 
Sbjct: 1   MSFQQIFLTAGSAMTAQTVRLNTISSNLANADSFSGNKEDVFKPLKPIFATIYNNMNNGS 60

Query: 62  ---------RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
                     V  +    S   +  +P +P+ANA G V Y  ++V+ E ADM   +R + 
Sbjct: 61  ASNIRSAQVMVADVIATDSLTQQRHEPENPLANAEGNVFYSGIDVVSEMADMMSASRSFE 120

Query: 113 ANLQTIKQSHDMMTTTLDLL 132
            N++ +  +  M  + + +L
Sbjct: 121 MNVEVLNNAKSMQQSLISVL 140


>gi|257866376|ref|ZP_05646029.1| flagellar basal body rod protein FlgC [Enterococcus casseliflavus
           EC30]
 gi|257871287|ref|ZP_05650940.1| flagellar basal body rod protein FlgC [Enterococcus gallinarum EG2]
 gi|257873108|ref|ZP_05652761.1| flagellar basal body rod protein FlgC [Enterococcus casseliflavus
           EC10]
 gi|257875989|ref|ZP_05655642.1| flagellar basal body rod protein FlgC [Enterococcus casseliflavus
           EC20]
 gi|257800334|gb|EEV29362.1| flagellar basal body rod protein FlgC [Enterococcus casseliflavus
           EC30]
 gi|257805451|gb|EEV34273.1| flagellar basal body rod protein FlgC [Enterococcus gallinarum EG2]
 gi|257807272|gb|EEV36094.1| flagellar basal body rod protein FlgC [Enterococcus casseliflavus
           EC10]
 gi|257810155|gb|EEV38975.1| flagellar basal body rod protein FlgC [Enterococcus casseliflavus
           EC20]
          Length = 138

 Score = 82.6 bits (202), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 33/138 (23%), Positives = 59/138 (42%), Gaps = 7/138 (5%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             +     I  SGLA++  ++  IS NIAN  T      +   ++  +  E + +   G 
Sbjct: 1   MGMFNGLTINASGLALERLKLDTISSNIANVNTNQTQTTAAYQKKSILFSENLKNSREGT 60

Query: 62  R------VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
                  V  I  D++     +DP +P AN  G V   NV++  E   M +  R Y AN+
Sbjct: 61  PATYGVKVTGIAADETE-KLTYDPTNPAANDEGYVGQSNVDIADEMVAMLQAVRTYEANV 119

Query: 116 QTIKQSHDMMTTTLDLLR 133
              + +  ++   L++ +
Sbjct: 120 SASEMNKTILKKALEISK 137


>gi|170747377|ref|YP_001753637.1| flagellar basal body rod protein FlgC [Methylobacterium
           radiotolerans JCM 2831]
 gi|170653899|gb|ACB22954.1| flagellar basal body rod protein FlgC [Methylobacterium
           radiotolerans JCM 2831]
          Length = 136

 Score = 82.6 bits (202), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 46/118 (38%), Positives = 62/118 (52%)

Query: 14  GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTF 73
           G  VQS R++ ISEN+ANA +   TPG  PY RK   F  V   S    V +I  D + F
Sbjct: 17  GRQVQSGRIRAISENLANADSVPTTPGGAPYARKIAVFAPVAADSPRDPVGRIARDTTGF 76

Query: 74  VEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
              +DP  P A+ SG V+ PNVN  VE+AD++   R Y  +L        +   T++L
Sbjct: 77  RTRYDPTSPGADPSGYVRLPNVNSAVESADLQRVVRNYELSLSASASIKTLAQATINL 134


>gi|269965642|ref|ZP_06179755.1| Flagellar basal-body rod protein C [Vibrio alginolyticus 40B]
 gi|269829710|gb|EEZ83946.1| Flagellar basal-body rod protein C [Vibrio alginolyticus 40B]
          Length = 138

 Score = 82.2 bits (201), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 29/131 (22%), Positives = 56/131 (42%), Gaps = 10/131 (7%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDP----------YRRKTISF 51
                   I  S +  Q+ R+  ++ N+ANA      P              Y++  ++ 
Sbjct: 1   MSFTDIYSITGSAMTAQTVRLNTVASNLANADAVSANPEDAYKALKPVFATVYQKTQMTT 60

Query: 52  EEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
           E   + +  VR+  +  +     + F+P +P+AN  G V YP+++V+ E ADM    R +
Sbjct: 61  ENGAYPNAEVRIVDVVKNAGDAEKRFEPNNPLANDEGYVFYPDIDVVAEMADMMSATRSF 120

Query: 112 MANLQTIKQSH 122
             N++ +    
Sbjct: 121 ETNVEVLANVK 131


>gi|299066533|emb|CBJ37723.1| putative Flagellar basal-body rod protein FlgC [Ralstonia
           solanacearum CMR15]
          Length = 157

 Score = 82.2 bits (201), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 34/155 (21%), Positives = 61/155 (39%), Gaps = 24/155 (15%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG- 59
           MDY   +  I+ +G+AV+  R+ + S N+ANA T   T G++    + ++    M  +  
Sbjct: 1   MDYA-RAFAISAAGMAVERTRVDVASLNLANANTVLTTDGANYQPLRVVARAMPMGANQE 59

Query: 60  ----------------------GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNV 97
                                  + + +     +     ++PGHP AN  G V Y  V+ 
Sbjct: 60  AGWVSFSDRVEQGLDTPERSSLSLPLVQTEPTGAQPRMVYEPGHPFANDKGFVAYQGVDT 119

Query: 98  LVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
             E   +    R Y AN+  +  +  +    LD+ 
Sbjct: 120 ATEMVTLMSALRAYEANVVAMNTARTLSLKALDIG 154


>gi|289679031|ref|ZP_06499921.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           syringae FF5]
          Length = 124

 Score = 82.2 bits (201), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/124 (29%), Positives = 52/124 (41%), Gaps = 14/124 (11%)

Query: 24  IISENIANARTTGDTPGSDPYRRKTIS--------------FEEVMHGSGGVRVKKIGVD 69
             + NIANA T   +       R  +               F++      GV+V  I  D
Sbjct: 1   TPASNIANAETVSSSMDQTYRARHPVFATVMQGQQSTGGSLFQDQGEAGQGVQVNGIIED 60

Query: 70  QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
            S     ++P HP A+  G V YPNVNV+ E ADM   +R +  N + +  +  MM   L
Sbjct: 61  SSNLEARYEPNHPSADKDGYVYYPNVNVVEEMADMISASRSFQTNAEIMNTAKSMMQKVL 120

Query: 130 DLLR 133
            L +
Sbjct: 121 TLGQ 124


>gi|297520377|ref|ZP_06938763.1| flagellar basal body rod protein FlgC [Escherichia coli OP50]
          Length = 103

 Score = 81.8 bits (200), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 33/103 (32%), Positives = 52/103 (50%), Gaps = 3/103 (2%)

Query: 34  TTGDTPGSDPYRRKTISFEEVMHGS---GGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
            +   P   PYR K + F+         GGV+V  +   Q+     ++PG+P+A+A G V
Sbjct: 1   DSVTGPDGQPYRAKQVVFQVNAAPGAATGGVKVADVIESQAPDKLVYEPGNPLADAKGYV 60

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           K PNV+V+ E  +    +R Y AN++ +     MM  TL L +
Sbjct: 61  KMPNVDVVGEMVNTMSASRSYQANVEVLNTVKSMMLKTLTLGQ 103


>gi|325567533|ref|ZP_08144200.1| flagellar basal-body rod protein FlgC [Enterococcus casseliflavus
           ATCC 12755]
 gi|325158966|gb|EGC71112.1| flagellar basal-body rod protein FlgC [Enterococcus casseliflavus
           ATCC 12755]
          Length = 138

 Score = 81.8 bits (200), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 34/138 (24%), Positives = 60/138 (43%), Gaps = 7/138 (5%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             +     I  SGLA++  ++  IS NIAN  T      +   ++  +  E + +   G 
Sbjct: 1   MGIFNGLTINASGLALERLKLDTISSNIANVNTNQTQTTAAYQKKSILFSENLKNSREGT 60

Query: 62  R------VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
                  V  I  D++     +DP +P ANA G V   NV++  E   M +  R Y AN+
Sbjct: 61  PATYGVKVTGIAADETE-KLTYDPTNPAANAEGYVGQSNVDIADEMVAMLQAVRTYEANV 119

Query: 116 QTIKQSHDMMTTTLDLLR 133
              + +  ++   L++ +
Sbjct: 120 SASEMNKTILKKALEISK 137


>gi|323178496|gb|EFZ64074.1| flagellar basal-body rod protein FlgC [Escherichia coli 1180]
          Length = 130

 Score = 80.3 bits (196), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 29/128 (22%), Positives = 53/128 (41%), Gaps = 10/128 (7%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG----------SGGVRVK 64
           +  Q+ R+  ++ N+ANA     +       R  +      H            G     
Sbjct: 1   MTAQTLRLNTVASNLANANAPASSEAQAYKARSPVFAAVYHHSLLAGTHRHAIDGASVQV 60

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           +  +     V+ ++P  P+A+A+G V YP+VNV+ + ADM   +R +  N+  +     M
Sbjct: 61  QDVLQTGGAVKRYEPHSPLADANGDVWYPDVNVVEQMADMMSASRDFETNVDVLNNVKSM 120

Query: 125 MTTTLDLL 132
             + L L 
Sbjct: 121 QQSLLKLG 128


>gi|306841051|ref|ZP_07473775.1| flagellar basal-body rod protein FlgC [Brucella sp. BO2]
 gi|306288940|gb|EFM60240.1| flagellar basal-body rod protein FlgC [Brucella sp. BO2]
          Length = 107

 Score = 79.5 bits (194), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 53/105 (50%), Positives = 74/105 (70%), Gaps = 3/105 (2%)

Query: 33  RTTGDTPGSDPYRRKTISFEEVMHGSGGV---RVKKIGVDQSTFVEEFDPGHPVANASGI 89
           ++T  T  +DPYRRKT+SF   +    G    RV ++G D S F+E++DP HP A+A G 
Sbjct: 2   QSTARTADADPYRRKTVSFRTELEQGTGAAEVRVAEVGKDTSPFIEQYDPSHPAADARGY 61

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
           VKYPNVN++VE ADMRE NR Y ANLQ ++Q+ ++++ T+DLLR 
Sbjct: 62  VKYPNVNMVVEMADMREANRSYEANLQVVRQARELISMTIDLLRS 106


>gi|256370953|ref|YP_003108777.1| protein of unknown function DUF1078 domain protein [Acidimicrobium
           ferrooxidans DSM 10331]
 gi|256007537|gb|ACU53104.1| protein of unknown function DUF1078 domain protein [Acidimicrobium
           ferrooxidans DSM 10331]
          Length = 144

 Score = 79.1 bits (193), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 28/142 (19%), Positives = 51/142 (35%), Gaps = 12/142 (8%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG---- 57
             L  +  +A +G+  +   +  I+ N+AN      T       ++ +            
Sbjct: 1   MSLFPAIDVAATGVTTEQTWLDTIASNVANVNDQSATNQPIYQEQEVLVQPVETSPVTGV 60

Query: 58  --------SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNR 109
                     GV+V  I       V  +DP   +ANA G VK P +++  +  ++     
Sbjct: 61  ADTTTTPVGSGVQVDAIVTPLPNGVLSYDPTSTLANAQGYVKTPGISLAQQLGNLVNAQT 120

Query: 110 LYMANLQTIKQSHDMMTTTLDL 131
            Y AN+  I Q+       L +
Sbjct: 121 SYQANVAVINQAKTAYEAILGI 142


>gi|303327773|ref|ZP_07358213.1| putative flagellar basal-body rod protein [Desulfovibrio sp.
           3_1_syn3]
 gi|302862134|gb|EFL85068.1| putative flagellar basal-body rod protein [Desulfovibrio sp.
           3_1_syn3]
          Length = 133

 Score = 78.8 bits (192), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 43/132 (32%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M  +  S ++  S +   S  M + + N+AN  T G  P    Y          +     
Sbjct: 1   MSGITGSMNLGASAMNAHSWGMAVTAHNVANVNTAGFAPQHAVYATGPGGRGVRLDAVLQ 60

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
                  +             P +  S  V     ++  E   M  T R Y AN Q ++ 
Sbjct: 61  DSGVAGRLPAEVRNNPAVSTAPASMESDFVNPGGTDLGREMTQMISTQRTYEANAQVVRT 120

Query: 121 SHDMMTTTLDLL 132
              M+ T LDL 
Sbjct: 121 GDAMLGTLLDLK 132


>gi|317050615|ref|YP_004111731.1| flagellar basal-body rod protein FlgG [Desulfurispirillum indicum
           S5]
 gi|316945699|gb|ADU65175.1| flagellar basal-body rod protein FlgG [Desulfurispirillum indicum
           S5]
          Length = 262

 Score = 78.4 bits (191), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 25/130 (19%), Positives = 41/130 (31%), Gaps = 3/130 (2%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           L     I +  + +   R   +S  I N     +                 +   GG   
Sbjct: 136 LEPGIQIPDDAVEIYVGRDGTVSVQIGNQNQMQELGQITT---AKFINPAGLESVGGNIF 192

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
           K+     +  V         A A G ++  NV ++ E  +M    R Y  N + I    +
Sbjct: 193 KETSASGAPQVGIPGEDSFGAIAQGFLEQSNVQLVEEMVNMISAQRAYEINSKAITTGDE 252

Query: 124 MMTTTLDLLR 133
           M+ T   L R
Sbjct: 253 MLQTATQLKR 262



 Score = 39.1 bits (89), Expect = 0.21,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 26/67 (38%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I +   A++G+  Q   +  IS N+AN  T G       ++       +    S    +
Sbjct: 1  MIRALWTASTGMMAQQTHIDNISNNLANVNTGGFKKSRVEFQDLMYQTIKPAGASTAAGI 60

Query: 64 KKIGVDQ 70
           +   +Q
Sbjct: 61 TRPVGEQ 67


>gi|83815671|ref|YP_446718.1| flagellar basal-body rod protein FlgC [Salinibacter ruber DSM
           13855]
 gi|294508653|ref|YP_003572712.1| flagellar basal-body rod protein flgC [Salinibacter ruber M8]
 gi|83757065|gb|ABC45178.1| flagellar basal-body rod protein FlgC [Salinibacter ruber DSM
           13855]
 gi|294344982|emb|CBH25760.1| Flagellar basal-body rod protein flgC [Salinibacter ruber M8]
          Length = 166

 Score = 78.4 bits (191), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 36/162 (22%), Positives = 60/162 (37%), Gaps = 32/162 (19%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS--- 58
           +  + +   A  GL  Q  ++   +EN+ANA T+    G     ++ +   +        
Sbjct: 5   NQFLPAMKTAARGLEAQRRKLGAATENLANASTSRTEDGDPFRIKRAVQEVDNADYERLN 64

Query: 59  -----------------------------GGVRVKKIGVDQSTFVEEFDPGHPVANASGI 89
                                        G +  +    +      E+DP HP A+  G 
Sbjct: 65  RGGLDPQLELRSTNARHLREASLPPEQATGNLGPETEIEEIEKERLEYDPSHPHADEEGY 124

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           V YP+VNV  E A M   NR+Y ANL  ++ +  M   T ++
Sbjct: 125 VHYPDVNVAQEMARMTSANRVYEANLSAVEATKSMAQRTFEI 166


>gi|313620054|gb|EFR91569.1| flagellar basal-body rod protein FlgC [Listeria innocua FSL S4-378]
          Length = 121

 Score = 78.4 bits (191), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 37/122 (30%), Positives = 61/122 (50%), Gaps = 7/122 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS------FEEVMHG 57
           +    + + S L      M++ S NIANA ++   PG  P+ RK +       FE  + G
Sbjct: 1   MFEGINTSGSALNAAKQWMEVSSNNIANADSSA-APGETPFLRKRVVLSEITPFETALTG 59

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           + GV+V +I  D  +    +DP HP AN +G V Y NV++  E  ++    ++Y AN   
Sbjct: 60  TKGVKVSEISSDTGSVKRVYDPTHPNANEAGYVNYANVDMTAEMTNLMVGQKMYAANTSA 119

Query: 118 IK 119
           ++
Sbjct: 120 LQ 121


>gi|119715008|ref|YP_921973.1| flagellar basal-body rod protein [Nocardioides sp. JS614]
 gi|119535669|gb|ABL80286.1| flagellar basal-body rod protein [Nocardioides sp. JS614]
          Length = 130

 Score = 78.0 bits (190), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 33/132 (25%), Positives = 57/132 (43%), Gaps = 3/132 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
                +  IA S + V    +  ++ NIAN  T   T  +    +  I    V    GGV
Sbjct: 1   MGAFDTLTIAGSSMGVHQTWLDTLASNIANVNTVTPTSQNAFQAQMLIVRSAV---GGGV 57

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
            V  +           DPG+P+A+A G V+ P++++  +   +    R + A++Q  KQ+
Sbjct: 58  EVAGLAQSDPQGRLVSDPGNPMADADGYVRAPDMDMSTQMTQLVMAQRGFQASVQVTKQA 117

Query: 122 HDMMTTTLDLLR 133
            +  T  L + R
Sbjct: 118 QETYTAALQIGR 129


>gi|315927025|gb|EFV06380.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
           jejuni DFVF1099]
          Length = 144

 Score = 77.2 bits (188), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 47/143 (32%), Positives = 60/143 (41%), Gaps = 31/143 (21%)

Query: 22  MQIISENIANARTTGDTPGSDPYRRK-------------------------------TIS 50
           M +IS NIANA TT    G    RR+                                 S
Sbjct: 1   MNVISSNIANANTTRTAEGGPYRRREVIFKATDFDKLLNEQINKDNNFLKYENPLNDPSS 60

Query: 51  FEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRL 110
            EE       V V K+  D   F  ++DP HP ANA G V YPNVN ++E AD+ E  R 
Sbjct: 61  PEEAKPAIQSVVVDKVVRDDKDFRMKYDPSHPDANAEGYVAYPNVNPVIEMADLIEATRA 120

Query: 111 YMANLQTIKQSHDMMTTTLDLLR 133
           Y AN+     +  +  + +DLLR
Sbjct: 121 YQANVSAFTSAKTISQSAIDLLR 143


>gi|255028426|ref|ZP_05300377.1| flagellar basal body rod protein FlgC [Listeria monocytogenes LO28]
          Length = 124

 Score = 77.2 bits (188), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 38/124 (30%), Positives = 63/124 (50%), Gaps = 7/124 (5%)

Query: 16  AVQSARMQIISENIANARTTGDTPGSDPYRRKTIS------FEEVMHGSGGVRVKKIGVD 69
                 M++ S NIANA ++   PG  P+ RK +       FE  + G+ GV+V +I  D
Sbjct: 1   NAAKQWMEVSSNNIANADSSA-APGETPFLRKRVVLSEITPFETALTGTKGVKVSEISSD 59

Query: 70  QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
             +    +DP HP AN +G V Y NV++  E  ++    ++Y AN   ++ +  MM   L
Sbjct: 60  TGSVKRVYDPTHPNANEAGYVNYANVDMTAEMTNLMVGQKMYAANTSALQANEKMMEKDL 119

Query: 130 DLLR 133
           ++ +
Sbjct: 120 EIGK 123


>gi|325274802|ref|ZP_08140830.1| flagellar basal body rod protein FlgC [Pseudomonas sp. TJI-51]
 gi|324100070|gb|EGB97888.1| flagellar basal body rod protein FlgC [Pseudomonas sp. TJI-51]
          Length = 87

 Score = 76.5 bits (186), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/86 (38%), Positives = 44/86 (51%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
              FE+      GV+VK I  DQS     ++P HP AN  G V YPNVNV+ E ADM   
Sbjct: 2   QSLFEDQGEAGQGVQVKGIVEDQSNLEARYEPNHPAANKDGYVYYPNVNVVEEMADMISA 61

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
           +R +  N + +  +  MM   L L +
Sbjct: 62  SRAFQTNAELMNTAKSMMQKVLTLGQ 87


>gi|326386928|ref|ZP_08208542.1| flagellar cell-proximal portion protein [Novosphingobium
           nitrogenifigens DSM 19370]
 gi|326208608|gb|EGD59411.1| flagellar cell-proximal portion protein [Novosphingobium
           nitrogenifigens DSM 19370]
          Length = 140

 Score = 76.1 bits (185), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/127 (23%), Positives = 55/127 (43%), Gaps = 2/127 (1%)

Query: 8   AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG--GVRVKK 65
             +    ++ Q  RM   + N+ANA T            K +    +   +G   V+V+ 
Sbjct: 12  FGLTGQAMSAQLVRMNTAASNLANAGTVASNAQGAYRPLKAVFATVLDRSTGLASVKVQG 71

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           +    +T V   +P HP+A+A+G V    V+   E  +M E+ R Y   ++ ++    +M
Sbjct: 72  VYQSGATPVRTHNPDHPLADANGDVWSSPVDENAEMVEMTESARQYQNVVEAMQTGKQLM 131

Query: 126 TTTLDLL 132
             TL + 
Sbjct: 132 LDTLRMK 138


>gi|288960379|ref|YP_003450719.1| flagellar basal-body rod protein [Azospirillum sp. B510]
 gi|288912687|dbj|BAI74175.1| flagellar basal-body rod protein [Azospirillum sp. B510]
          Length = 134

 Score = 75.7 bits (184), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 38/131 (29%), Positives = 60/131 (45%), Gaps = 4/131 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTP---GSDPYRRKTISFEEVMHGSGG 60
           ++ S  IA  GL  Q+ R+   + N+AN R+T   P   GS   +R       V    G 
Sbjct: 1   MVGSIGIALGGLTAQTRRLDASASNVANVRSTSAVPAKDGSTDGKRAAYQPLAVAQTDGN 60

Query: 61  VRVKKIGVDQST-FVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
              +      +  +++E+ P    AN SG+V  PNV++  E       NR Y AN+  ++
Sbjct: 61  PGTRTTFTPITPAYLQEYAPDDSAANGSGMVAAPNVDLATERITQMAANRAYGANVAVVR 120

Query: 120 QSHDMMTTTLD 130
              +MM + LD
Sbjct: 121 TQDEMMKSLLD 131


>gi|228964727|ref|ZP_04125834.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
           serovar sotto str. T04001]
 gi|228794977|gb|EEM42476.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
           serovar sotto str. T04001]
          Length = 128

 Score = 74.9 bits (182), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 38/127 (29%), Positives = 63/127 (49%), Gaps = 10/127 (7%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---- 59
           +  + + + SGL      M++ S NI NA TT   PG+D Y R+++  E     +     
Sbjct: 1   MFQAINASGSGLTTARKWMEVTSNNIVNANTTA-APGADLYERRSVVLESNNSFASMLDG 59

Query: 60  ----GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
               GV++K I  D++     +DP HP AN  G V+YPN++V  E  ++    ++Y AN 
Sbjct: 60  APTNGVKIKSIEADKTE-NLVYDPTHPHANEEGYVRYPNIDVTAEMTNVMVAQKMYEANT 118

Query: 116 QTIKQSH 122
             +  + 
Sbjct: 119 SVLNANK 125


>gi|91791420|ref|YP_561071.1| putative flagellar basal body rod protein FlgC [Shewanella
           denitrificans OS217]
 gi|91713422|gb|ABE53348.1| putative flagellar basal body rod protein FlgC [Shewanella
           denitrificans OS217]
          Length = 127

 Score = 74.5 bits (181), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 47/124 (37%), Gaps = 5/124 (4%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVD 69
           +A +G+A +  R++  S NIA A     T            F   + G            
Sbjct: 9   VAQTGMAFERNRIEAASLNIARANVVSSTAAQV-----EPLFMAALSGEELQPGNVKLTG 63

Query: 70  QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
                  + P HP+A+  G +  P++++  E   +    R Y AN++      +M    L
Sbjct: 64  YMKSKAIYQPAHPLADKQGFIYMPDIDLAHEMVTLSSAKRAYEANIKVYNSYKEMSAKAL 123

Query: 130 DLLR 133
           ++ +
Sbjct: 124 EIGK 127


>gi|27378285|ref|NP_769814.1| flagellar basal-body rod protein [Bradyrhizobium japonicum USDA
           110]
 gi|27351432|dbj|BAC48439.1| flagellar basal-body rod protein [Bradyrhizobium japonicum USDA
           110]
          Length = 149

 Score = 73.4 bits (178), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 33/147 (22%), Positives = 60/147 (40%), Gaps = 20/147 (13%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPG--------------------SDPY 44
           ++   IA SGL+  S R+ + + NIAN  TTG  P                     +   
Sbjct: 1   MSIFSIATSGLSAASLRVSVAASNIANISTTGPLPASGGSSTSAGAGSSGIGPTFPAAYV 60

Query: 45  RRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
             +     +    + G  V  +     +++ + DP  P AN  G+V  PNV++  E  ++
Sbjct: 61  PLRVDQVSQSSGSTPGGSVATVSAVSPSYIAQSDPSAPFANEDGLVAAPNVDLAGEFVEL 120

Query: 105 RETNRLYMANLQTIKQSHDMMTTTLDL 131
                 ++AN + I+   +   + LD+
Sbjct: 121 VTAKYSFIANAKVIQAYAETTESLLDI 147


>gi|39933177|ref|NP_945453.1| putative flagellar basal-body rod protein flgC [Rhodopseudomonas
           palustris CGA009]
 gi|192288534|ref|YP_001989139.1| hypothetical protein Rpal_0101 [Rhodopseudomonas palustris TIE-1]
 gi|39652802|emb|CAE25541.1| putative flagellar basal-body rod protein flgC [Rhodopseudomonas
           palustris CGA009]
 gi|192282283|gb|ACE98663.1| protein of unknown function DUF1078 domain protein
           [Rhodopseudomonas palustris TIE-1]
          Length = 136

 Score = 73.4 bits (178), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 42/134 (31%), Positives = 62/134 (46%), Gaps = 8/134 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSD-------PYRRKTISFEEVMH 56
           + A A IA SGL   + R+++ + NIAN R+TG  PG+D       P   K +   +   
Sbjct: 1   MSAIASIAVSGLNAATRRLEVSASNIANQRSTGALPGADGTVPPGAPQAYKPLQVNQTDT 60

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
            +GG +   +       V   DP  P A+A G+V  PNV++  E          Y ANL 
Sbjct: 61  PTGGTQ-TSLATTSPATVPVSDPQAPFADADGMVAAPNVDLAQEFIGQMVAKYSYTANLA 119

Query: 117 TIKQSHDMMTTTLD 130
           +++   DM    LD
Sbjct: 120 SLQADRDMTKALLD 133


>gi|209966304|ref|YP_002299219.1| flagellar basal-body rod protein FlgC [Rhodospirillum centenum SW]
 gi|209959770|gb|ACJ00407.1| flagellar basal-body rod protein FlgC [Rhodospirillum centenum SW]
          Length = 146

 Score = 72.2 bits (175), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 16/144 (11%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTP------------GSDPYRRKTISF 51
           ++    IA SG+  Q+ R+   ++NIANAR+TG  P               P     +S 
Sbjct: 1   MVDPIAIAGSGMTAQARRLAAGADNIANARSTGALPGSAAGAPAGATGADTPRPYAPVSS 60

Query: 52  EEV----MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
            +       G G          Q  FV EF P  P A+A G+V  PNV+++ ET  M + 
Sbjct: 61  GQTAVTGPDGQGMGTRAVFRATQPAFVPEFSPDSPFADADGMVAAPNVDLVGETVAMTQG 120

Query: 108 NRLYMANLQTIKQSHDMMTTTLDL 131
              Y ANL+  + + ++    L+L
Sbjct: 121 LDAYKANLRVFEAADELTREALNL 144


>gi|78043762|ref|YP_359848.1| flagellar basal-body rod protein FlgG [Carboxydothermus
           hydrogenoformans Z-2901]
 gi|77995877|gb|ABB14776.1| flagellar basal-body rod protein FlgG [Carboxydothermus
           hydrogenoformans Z-2901]
          Length = 261

 Score = 72.2 bits (175), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 26/104 (25%), Positives = 41/104 (39%), Gaps = 2/104 (1%)

Query: 32  ARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVAN--ASGI 89
            R+ G T  + P    +    E +   G          Q++F     PG        SG 
Sbjct: 158 VRSDGTTEFAGPIGLMSFKNPETLERIGQNVYSATIDTQTSFSSPVTPGQQGQGILVSGY 217

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  NV++  E  +M  T R Y AN + I  S  M+   L++ R
Sbjct: 218 LEMSNVDLASEFTEMIVTQRGYQANARVITTSDQMLEELLNIKR 261



 Score = 35.6 bits (80), Expect = 2.5,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 28/70 (40%), Gaps = 3/70 (4%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR---RKTISFEEVMHGSGG 60
          +I S +   SGL     +M +++ NI+N  T G       +     +  +   V     G
Sbjct: 1  MIRSLYSGISGLKSHQYKMDVVANNISNVNTIGYKSSRVNFEDLIYQKTNQSGVYPSYVG 60

Query: 61 VRVKKIGVDQ 70
          + V   GVD 
Sbjct: 61 LGVNVSGVDT 70


>gi|309388846|gb|ADO76726.1| flagellar basal-body rod protein FlgG [Halanaerobium praevalens DSM
           2228]
          Length = 260

 Score = 71.8 bits (174), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 21/116 (18%), Positives = 38/116 (32%)

Query: 18  QSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEF 77
           ++  + I S+   NA   G+       +    +    +   G                  
Sbjct: 145 EATEISITSDGTINALVDGENQQLGQIQLYRFANPAGLSSEGRNLYSDTVASGQAMQGVP 204

Query: 78  DPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
                     G ++  NV V+ E  +M    R Y  N ++I+ S +M+ T   L R
Sbjct: 205 GEQGFGTVTQGFLEMSNVKVVEEMVNMIAAQRAYETNSKSIQASDEMLQTANQLKR 260



 Score = 40.6 bits (93), Expect = 0.081,   Method: Composition-based stats.
 Identities = 10/62 (16%), Positives = 23/62 (37%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I++   + +G+  Q   + +IS N+AN  T+G       +     +             
Sbjct: 1  MISALWTSATGMNSQQTNIDVISNNLANVNTSGFKKSKINFADLIYTQMRQPGTPNAQGA 60

Query: 64 KK 65
          + 
Sbjct: 61 EV 62


>gi|239907806|ref|YP_002954547.1| putative flagellar basal-body rod protein [Desulfovibrio magneticus
           RS-1]
 gi|239797672|dbj|BAH76661.1| putative flagellar basal-body rod protein [Desulfovibrio magneticus
           RS-1]
          Length = 128

 Score = 71.4 bits (173), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 35/128 (27%), Positives = 60/128 (46%), Gaps = 2/128 (1%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +  +   A S L+  S  M + + N+AN  T G        R +T    + +  S  VR 
Sbjct: 1   MTDAISAAQSALSAFSTSMAVTANNVANVNTDGYKSQDA--RLETGPDGQGVRVSDIVRD 58

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
              G  Q   V  ++       ++G+V+  NV++  +T DM +T+R + AN+ TI+    
Sbjct: 59  ASPGGYQPESVSAYNQAGVYEPSAGLVETSNVDLARQTVDMIQTSRAFEANVVTIRSQDQ 118

Query: 124 MMTTTLDL 131
           M+ T LD+
Sbjct: 119 MLGTLLDM 126


>gi|46578928|ref|YP_009736.1| flagellar basal body rod protein FlgG [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120603471|ref|YP_967871.1| flagellar basal body rod protein FlgG [Desulfovibrio vulgaris DP4]
 gi|46448340|gb|AAS94995.1| flagellar basal-body rod protein FlgG [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120563700|gb|ABM29444.1| flagellar basal-body rod protein FlgG [Desulfovibrio vulgaris DP4]
 gi|311232786|gb|ADP85640.1| flagellar basal-body rod protein FlgG [Desulfovibrio vulgaris RCH1]
          Length = 260

 Score = 71.1 bits (172), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 21/110 (19%), Positives = 34/110 (30%)

Query: 24  IISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPV 83
             + +IA     G    +      T      +   G                     +  
Sbjct: 151 TEAGHIAALDANGQELAAADIPLYTFINPAGLDAIGRNLYVPSEASGEAVEGVPGEDNVG 210

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             A G ++  NV V+ E  +M    R Y  N + I  S  M+ T ++L R
Sbjct: 211 TLAQGFLEMSNVEVVDEMVNMIVGQRAYEMNSKAISTSDQMLQTAVNLKR 260



 Score = 42.9 bits (99), Expect = 0.014,   Method: Composition-based stats.
 Identities = 14/91 (15%), Positives = 27/91 (29%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ S   A +G+  Q   + +IS N+AN  T+G       +         +   +     
Sbjct: 1  MMRSLWTAATGMVAQQLNIDVISHNLANVNTSGFKKSRAEFEDLMYQNMRIAGSATEGDS 60

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIVKYPN 94
          +     Q          H   +        N
Sbjct: 61 RIPVGIQVGMGVRPTAVHKFFSQGDFQNSGN 91


>gi|316931494|ref|YP_004106476.1| hypothetical protein Rpdx1_0099 [Rhodopseudomonas palustris DX-1]
 gi|315599208|gb|ADU41743.1| protein of unknown function DUF1078 domain protein
           [Rhodopseudomonas palustris DX-1]
          Length = 136

 Score = 71.1 bits (172), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 41/134 (30%), Positives = 60/134 (44%), Gaps = 8/134 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPG-------SDPYRRKTISFEEVMH 56
           + A A IA SGL   + R+++ + NIAN R+TG  PG         P   K +   +   
Sbjct: 1   MSAIASIAVSGLNAATRRLEVSASNIANQRSTGTLPGANGTVPAGAPQAYKPLQVNQTDT 60

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
            +GG +   +       V   DP  P A+A G+V  PNV++  E          Y ANL 
Sbjct: 61  STGGTQ-TSLATTSPATVPVSDPQAPFADADGMVAAPNVDLAQEFIGQMVAKYSYAANLA 119

Query: 117 TIKQSHDMMTTTLD 130
           +++   DM    LD
Sbjct: 120 SLQADRDMTKALLD 133


>gi|303328380|ref|ZP_07358818.1| flagellar basal-body rod protein FlgG [Desulfovibrio sp. 3_1_syn3]
 gi|302861710|gb|EFL84646.1| flagellar basal-body rod protein FlgG [Desulfovibrio sp. 3_1_syn3]
          Length = 261

 Score = 71.1 bits (172), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 22/122 (18%), Positives = 39/122 (31%), Gaps = 1/122 (0%)

Query: 14  GLAVQSARMQIISE-NIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQST 72
            +  ++  + I S  +IA   + G           T      +   G           + 
Sbjct: 140 AVPAETKNISISSTGHIAALDSEGQEIAGAEIPLYTFINPAGLDARGRNLYTPTEASGAE 199

Query: 73  FVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
                   +    A G ++  NV V+ E  +M    R Y  N + I+ S  M+   + L 
Sbjct: 200 TEGVPGTDNVGTLAQGFLEMSNVEVVDEMVNMIVGQRAYEVNSKAIQTSDSMLGMAVQLK 259

Query: 133 RD 134
           R 
Sbjct: 260 RS 261



 Score = 41.4 bits (95), Expect = 0.039,   Method: Composition-based stats.
 Identities = 14/91 (15%), Positives = 26/91 (28%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ S +   +G+  Q   + +IS N+AN  TTG       +        ++         
Sbjct: 1  MMRSLYTGATGMVAQQLNIDVISNNLANVNTTGFKKSRAEFEDLMYQTMKIAGSITEGDN 60

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIVKYPN 94
          +     Q          H            N
Sbjct: 61 RLPVGIQVGMGVRPTAVHKFFTQGDFQNTGN 91


>gi|294828153|ref|NP_712848.2| flagellar basal body rod protein FlgG [Leptospira interrogans
           serovar Lai str. 56601]
 gi|293386000|gb|AAN49866.2| endoflagellar distal basal body rod protein [Leptospira interrogans
           serovar Lai str. 56601]
          Length = 264

 Score = 70.7 bits (171), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 15/86 (17%), Positives = 29/86 (33%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                  +   G    ++                      G ++  NV ++ E   M   
Sbjct: 179 RFVNPAGLQAIGKNLFQETVASGPEIPGTPGMEGFGNVLQGFLEMSNVKIVEEMVAMIVA 238

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y +N + I+ S +M++T + L R
Sbjct: 239 QRAYESNSKAIQTSDNMLSTAISLKR 264



 Score = 41.8 bits (96), Expect = 0.031,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 18/40 (45%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          + S   A +G+  Q   +  IS N+AN  TTG       +
Sbjct: 1  MRSLWTAATGMIAQQFHIDTISNNLANVNTTGFKKNRADF 40


>gi|116331368|ref|YP_801086.1| flagellar basal body rod protein FlgG [Leptospira borgpetersenii
           serovar Hardjo-bovis JB197]
 gi|116125057|gb|ABJ76328.1| Endoflagellar distal basal body rod protein [Leptospira
           borgpetersenii serovar Hardjo-bovis JB197]
          Length = 264

 Score = 70.7 bits (171), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 15/86 (17%), Positives = 29/86 (33%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                  +   G    ++                      G ++  NV ++ E   M   
Sbjct: 179 RFVNPAGLQAIGKNLFQETVASGPEIPGTPGMEGFGNVLQGFLEMSNVKIVEEMVAMIVA 238

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y +N + I+ S +M++T + L R
Sbjct: 239 QRAYESNSKAIQTSDNMLSTAISLKR 264



 Score = 41.8 bits (96), Expect = 0.032,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 18/40 (45%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          + S   A +G+  Q   +  IS N+AN  TTG       +
Sbjct: 1  MRSLWTAATGMIAQQFHIDTISNNLANVNTTGFKKNRADF 40


>gi|220932494|ref|YP_002509402.1| flagellar basal-body rod protein FlgG [Halothermothrix orenii H
           168]
 gi|219993804|gb|ACL70407.1| flagellar basal-body rod protein FlgG [Halothermothrix orenii H
           168]
          Length = 262

 Score = 70.7 bits (171), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 25/131 (19%), Positives = 41/131 (31%), Gaps = 3/131 (2%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            +    +I     ++       I+  I N        G     R   S    ++  G   
Sbjct: 135 PIQPEIYIPEDASSISITSDGTIAVEI-NGSNQPQQIGQIELAR--FSNPAGLNSIGRNL 191

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
            K         V           A G ++  NV V+ E  +M    R Y  N + I+ + 
Sbjct: 192 FKPTVASGDPIVGTPGSPGFGTIAQGFLEMSNVKVVEEMVNMIAAQRAYEINSKAIQAAD 251

Query: 123 DMMTTTLDLLR 133
           +M+ T   L R
Sbjct: 252 EMLRTASQLRR 262



 Score = 45.6 bits (106), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 27/68 (39%), Gaps = 3/68 (4%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR---RKTISFEEVMHGSGG 60
          +I +   A +G+  Q   +  IS N+AN  TTG       ++    + I      +  GG
Sbjct: 1  MIGALWTAATGMDAQQTNIDTISNNLANVNTTGFKKTRVNFQDLMYQHIRQPGTPNSQGG 60

Query: 61 VRVKKIGV 68
               I V
Sbjct: 61 QIPVGIEV 68


>gi|222100099|ref|YP_002534667.1| Flagellar basal-body rod protein FlgG [Thermotoga neapolitana DSM
           4359]
 gi|221572489|gb|ACM23301.1| Flagellar basal-body rod protein FlgG [Thermotoga neapolitana DSM
           4359]
          Length = 268

 Score = 70.7 bits (171), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 16/86 (18%), Positives = 28/86 (32%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                  +   G                        A   G ++  NV+V+ E  DM   
Sbjct: 183 RFVNPSGLKSIGDNLYIATPASGDPIEGVPGQDGFGAIKQGFLEKSNVDVVREMVDMITA 242

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y  N + I+ + +M+ T  ++ R
Sbjct: 243 QRAYEFNSRVIQTADEMLRTATNVKR 268



 Score = 44.9 bits (104), Expect = 0.004,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 23/43 (53%)

Query: 3  YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
           ++ S + A +G++ Q  ++  I+ N+AN  TTG       ++
Sbjct: 7  SMMISLYSAATGMSAQQFKLDTIANNLANVDTTGYKKVRAEFQ 49


>gi|330809235|ref|YP_004353697.1| flagellar basal-body rod protein flgC [Pseudomonas brassicacearum
           subsp. brassicacearum NFM421]
 gi|327377343|gb|AEA68693.1| Putative Flagellar basal-body rod protein flgC [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 131

 Score = 70.3 bits (170), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 51/132 (38%), Gaps = 1/132 (0%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             L   + I    +A + +R ++ S N+A A          P               G  
Sbjct: 1   MPLDNISEIVRGSMAYERSRAEVASYNLAIANVAIGPGERSPL-LSVSPPTSFAGQLGLQ 59

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
           + +     +S      +P HP+A+ +G+V YPN+    E A +    R Y AN+++    
Sbjct: 60  QPRVHAQARSDSRLVHEPSHPMADQNGMVHYPNIEAAREMATLVSATRAYEANIRSYNSL 119

Query: 122 HDMMTTTLDLLR 133
            +M     ++ +
Sbjct: 120 REMTLKAFEIGK 131


>gi|183220919|ref|YP_001838915.1| flagellar basal body rod protein FlgG [Leptospira biflexa serovar
           Patoc strain 'Patoc 1 (Paris)']
 gi|189911015|ref|YP_001962570.1| flagellar basal body rod protein FlgG [Leptospira biflexa serovar
           Patoc strain 'Patoc 1 (Ames)']
 gi|167775691|gb|ABZ93992.1| Endoflagellar distal basal body rod protein [Leptospira biflexa
           serovar Patoc strain 'Patoc 1 (Ames)']
 gi|167779341|gb|ABZ97639.1| Flagellar basal-body rod protein FlgG (Distal rod protein)
           [Leptospira biflexa serovar Patoc strain 'Patoc 1
           (Paris)']
          Length = 265

 Score = 70.3 bits (170), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 16/86 (18%), Positives = 32/86 (37%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                  +   G    ++                  +   G ++  NV ++ E  +M   
Sbjct: 180 RFVNPAGLQAVGKNLFRETVASGQEIPGMPSQEGYGSVLQGFLEMSNVKIVEEMVNMIVA 239

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y +N +TI+ S +M++T + L R
Sbjct: 240 QRAYESNSKTIQTSDNMLSTAIGLKR 265



 Score = 42.2 bits (97), Expect = 0.026,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 18/41 (43%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          ++ S     +G+  Q   +  ++ N+AN  TTG       +
Sbjct: 1  MMRSLWTGATGMIAQQFHIDTVANNLANVNTTGFKKNRVDF 41


>gi|45657204|ref|YP_001290.1| flagellar basal body rod protein FlgG [Leptospira interrogans
           serovar Copenhageni str. Fiocruz L1-130]
 gi|45600442|gb|AAS69927.1| FlgG [Leptospira interrogans serovar Copenhageni str. Fiocruz
           L1-130]
          Length = 265

 Score = 70.3 bits (170), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 15/86 (17%), Positives = 29/86 (33%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                  +   G    ++                      G ++  NV ++ E   M   
Sbjct: 180 RFVNPAGLQAIGKNLFQETVASGPEIPGTPGMEGFGNVLQGFLEMSNVKIVEEMVAMIVA 239

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y +N + I+ S +M++T + L R
Sbjct: 240 QRAYESNSKAIQTSDNMLSTAISLKR 265



 Score = 43.7 bits (101), Expect = 0.009,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 19/41 (46%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          ++ S   A +G+  Q   +  IS N+AN  TTG       +
Sbjct: 1  MMRSLWTAATGMIAQQFHIDTISNNLANVNTTGFKKNRADF 41


>gi|94266018|ref|ZP_01289739.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
 gi|94270422|ref|ZP_01291737.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
 gi|93450809|gb|EAT01850.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
 gi|93453413|gb|EAT03835.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
          Length = 118

 Score = 70.3 bits (170), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 25/129 (19%), Positives = 48/129 (37%), Gaps = 12/129 (9%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           ++     A SGL     +    + N+AN  T G         +K           GGV  
Sbjct: 1   MVGGIQAALSGLQALQQKNSATAHNVANVNTDG--------YKKVKVSLAETTPPGGVEA 52

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
           +   +D              A+   +V+  NV++  E  +M  + R + ANL+ ++   +
Sbjct: 53  RAEKIDTPGPQV----SEQTADGPELVEKSNVDLAEEMPNMMLSRRYFQANLKVVQTEDE 108

Query: 124 MMTTTLDLL 132
            +   L++ 
Sbjct: 109 RLGNLLNIK 117


>gi|116327820|ref|YP_797540.1| flagellar basal body rod protein FlgG [Leptospira borgpetersenii
           serovar Hardjo-bovis L550]
 gi|116120564|gb|ABJ78607.1| Endoflagellar distal basal body rod protein [Leptospira
           borgpetersenii serovar Hardjo-bovis L550]
          Length = 265

 Score = 70.3 bits (170), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 15/86 (17%), Positives = 29/86 (33%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                  +   G    ++                      G ++  NV ++ E   M   
Sbjct: 180 RFVNPAGLQAIGKNLFQETVASGPEIPGTPGMEGFGNVLQGFLEMSNVKIVEEMVAMIVA 239

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y +N + I+ S +M++T + L R
Sbjct: 240 QRAYESNSKAIQTSDNMLSTAISLKR 265



 Score = 43.7 bits (101), Expect = 0.009,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 19/41 (46%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          ++ S   A +G+  Q   +  IS N+AN  TTG       +
Sbjct: 1  MMRSLWTAATGMIAQQFHIDTISNNLANVNTTGFKKNRADF 41


>gi|220905030|ref|YP_002480342.1| hypothetical protein Ddes_1767 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|219869329|gb|ACL49664.1| protein of unknown function DUF1078 domain protein [Desulfovibrio
           desulfuricans subsp. desulfuricans str. ATCC 27774]
          Length = 133

 Score = 70.3 bits (170), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 24/132 (18%), Positives = 39/132 (29%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M  +  S  +  S +   S  M + + N+AN  T G  P    Y          +     
Sbjct: 1   MSGINTSMQLGASAMNTHSWGMAVSAHNVANVSTPGFEPQRAVYATGPAGQGVRLDAVLQ 60

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
                     +    +                   N+  E   M  T   Y AN  T++ 
Sbjct: 61  RNGPVGTGGTAYNAAQAVYDVTAGLPLEAASPSGTNLAREMVSMISTQHAYKANATTVRT 120

Query: 121 SHDMMTTTLDLL 132
           +  M+ T LD+ 
Sbjct: 121 ADAMLGTLLDIK 132


>gi|163794627|ref|ZP_02188597.1| putative flagellar basal-body rod protein flgC [alpha
           proteobacterium BAL199]
 gi|159179900|gb|EDP64425.1| putative flagellar basal-body rod protein flgC [alpha
           proteobacterium BAL199]
          Length = 138

 Score = 70.3 bits (170), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 41/138 (29%), Positives = 66/138 (47%), Gaps = 8/138 (5%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIAN----ARTTGDTPGSDPYRR---KTISFEEV 54
             +  +   A SG+     R    + N+AN    A  T D P +D   R   +     + 
Sbjct: 1   MAISNALSSALSGVQAAERRFGNSANNVANLRSQAAPTVDGPATDADGRTLFRAARSVDQ 60

Query: 55  MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
              +GGVR  ++ VD S+    ++P    A+A G+V  PNV+++ ETAD     R   AN
Sbjct: 61  TTATGGVRSSQLLVDPSSIQG-YEPSAADADADGLVHRPNVDLVRETADQISGQRQLEAN 119

Query: 115 LQTIKQSHDMMTTTLDLL 132
           L TI+ + +++  TLD+ 
Sbjct: 120 LATIRAADELLQATLDIK 137


>gi|94266975|ref|ZP_01290624.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
 gi|93452330|gb|EAT02961.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
          Length = 118

 Score = 70.3 bits (170), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 25/129 (19%), Positives = 49/129 (37%), Gaps = 12/129 (9%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +++    A SGL     +    + N+AN  T G         +K           GGV  
Sbjct: 1   MVSGIQAALSGLQALQQKNSATAHNVANVNTDG--------YKKVKVSLAETTPPGGVEA 52

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
           +   +D              A+   +V+  NV++  E  +M  + R + ANL+ ++   +
Sbjct: 53  RAEKIDTPGPQV----SEQTADGPELVEKSNVDLAEEMPNMMLSRRYFQANLKVVQTEDE 108

Query: 124 MMTTTLDLL 132
            +   L++ 
Sbjct: 109 RLGNLLNIK 117


>gi|182412221|ref|YP_001817287.1| flagellar basal-body rod protein FlgG [Opitutus terrae PB90-1]
 gi|177839435|gb|ACB73687.1| flagellar basal-body rod protein FlgG [Opitutus terrae PB90-1]
          Length = 261

 Score = 69.9 bits (169), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 18/110 (16%), Positives = 40/110 (36%)

Query: 24  IISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPV 83
            IS+N     T  +   +        +    +   GG   ++     +  + +       
Sbjct: 152 AISDNGQVTLTGANGTTTFRLSVTRFANPSGLRSVGGNLYEETAASGTPEIGQPGEQGYG 211

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
               G ++  NVN++ E  ++    R Y  N ++I+ S +M+     + R
Sbjct: 212 QIMQGYIESSNVNIVEEMVNLIVAQRAYEINSKSIQTSDEMLQNVAQMKR 261



 Score = 41.8 bits (96), Expect = 0.033,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 24/63 (38%), Gaps = 3/63 (4%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR---RKTISFEEVMHGSGG 60
          +  S + A +G+  Q   +  I+ N+AN  T G       ++    +  +        GG
Sbjct: 1  MNLSLYSAATGMEAQQLNLNTIANNLANVNTPGFKRSKIEFQDLLYQKPTRASGTDSGGG 60

Query: 61 VRV 63
            V
Sbjct: 61 NIV 63


>gi|170288994|ref|YP_001739232.1| flagellar basal-body rod protein FlgG [Thermotoga sp. RQ2]
 gi|170176497|gb|ACB09549.1| flagellar basal-body rod protein FlgG [Thermotoga sp. RQ2]
          Length = 261

 Score = 69.9 bits (169), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 16/86 (18%), Positives = 28/86 (32%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                  +   G                        A   G ++  NV+V+ E  DM   
Sbjct: 176 RFVNPSGLKSIGDNLYIATPASGDPIEGVPGQDGFGAIKQGFLEKSNVDVVREMVDMITA 235

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y  N + I+ + +M+ T  ++ R
Sbjct: 236 QRAYEFNSRVIQTADEMLRTATNVKR 261



 Score = 44.5 bits (103), Expect = 0.005,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 23/42 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S + A +G++ Q  ++  I+ N+AN  TTG       ++
Sbjct: 1  MMISLYSAATGMSAQQFKLDTIANNLANVDTTGYKKVRAEFQ 42


>gi|15644290|ref|NP_229342.1| flagellar basal-body rod protein FlgG [Thermotoga maritima MSB8]
 gi|148270380|ref|YP_001244840.1| flagellar basal-body rod protein FlgG [Thermotoga petrophila RKU-1]
 gi|281412686|ref|YP_003346765.1| flagellar basal-body rod protein FlgG [Thermotoga naphthophila
           RKU-10]
 gi|4982109|gb|AAD36609.1|AE001800_19 flagellar basal-body rod protein FlgG [Thermotoga maritima MSB8]
 gi|147735924|gb|ABQ47264.1| flagellar basal-body rod protein FlgG [Thermotoga petrophila RKU-1]
 gi|281373789|gb|ADA67351.1| flagellar basal-body rod protein FlgG [Thermotoga naphthophila
           RKU-10]
          Length = 261

 Score = 69.5 bits (168), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 16/86 (18%), Positives = 28/86 (32%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                  +   G                        A   G ++  NV+V+ E  DM   
Sbjct: 176 RFVNPSGLKSIGDNLYIATPASGDPIEGVPGQDGFGAIKQGFLEKSNVDVVREMVDMITA 235

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y  N + I+ + +M+ T  ++ R
Sbjct: 236 QRAYEFNSRVIQTADEMLRTATNVKR 261



 Score = 44.1 bits (102), Expect = 0.007,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 23/42 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S + A +G++ Q  ++  I+ N+AN  TTG       ++
Sbjct: 1  MMISLYSAATGMSAQQFKLDTIANNLANVDTTGYKKVRAEFQ 42


>gi|22126388|ref|NP_669811.1| flagellar basal-body rod protein FlgG [Yersinia pestis KIM 10]
 gi|45441407|ref|NP_992946.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
           Microtus str. 91001]
 gi|108807175|ref|YP_651091.1| flagellar basal-body rod protein FlgG [Yersinia pestis Antiqua]
 gi|108812481|ref|YP_648248.1| flagellar basal-body rod protein FlgG [Yersinia pestis Nepal516]
 gi|145598608|ref|YP_001162684.1| flagellar basal-body rod protein FlgG [Yersinia pestis Pestoides F]
 gi|149366249|ref|ZP_01888284.1| flagellar basal-body rod protein FlgG [Yersinia pestis CA88-4125]
 gi|162420398|ref|YP_001606475.1| flagellar basal-body rod protein FlgG [Yersinia pestis Angola]
 gi|165925935|ref|ZP_02221767.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165938754|ref|ZP_02227309.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|166010911|ref|ZP_02231809.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166210683|ref|ZP_02236718.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|167401156|ref|ZP_02306659.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167419985|ref|ZP_02311738.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167425757|ref|ZP_02317510.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|167467493|ref|ZP_02332197.1| flagellar basal-body rod protein FlgG [Yersinia pestis FV-1]
 gi|218928924|ref|YP_002346799.1| flagellar basal-body rod protein FlgG [Yersinia pestis CO92]
 gi|229896244|ref|ZP_04511414.1| Flagellar basal-body rod protein flgG [Yersinia pestis Pestoides A]
 gi|229897179|ref|ZP_04512335.1| Flagellar basal-body rod protein flgG [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229897905|ref|ZP_04513056.1| Flagellar basal-body rod protein flgG [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229902863|ref|ZP_04517980.1| Flagellar basal-body rod protein flgG [Yersinia pestis Nepal516]
 gi|270486643|ref|ZP_06203717.1| flagellar basal-body rod protein FlgG [Yersinia pestis KIM D27]
 gi|294504028|ref|YP_003568090.1| flagellar basal-body rod protein FlgG [Yersinia pestis Z176003]
 gi|21959374|gb|AAM86062.1|AE013853_10 cell-distal portion of basal-body rod [Yersinia pestis KIM 10]
 gi|45436267|gb|AAS61823.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
           Microtus str. 91001]
 gi|108776129|gb|ABG18648.1| flagellar basal-body rod protein FlgG [Yersinia pestis Nepal516]
 gi|108779088|gb|ABG13146.1| flagellar basal-body rod protein FlgG [Yersinia pestis Antiqua]
 gi|115347535|emb|CAL20444.1| flagellar basal-body rod protein FlgG [Yersinia pestis CO92]
 gi|145210304|gb|ABP39711.1| flagellar basal-body rod protein FlgG [Yersinia pestis Pestoides F]
 gi|149292662|gb|EDM42736.1| flagellar basal-body rod protein FlgG [Yersinia pestis CA88-4125]
 gi|162353213|gb|ABX87161.1| flagellar basal-body rod protein FlgG [Yersinia pestis Angola]
 gi|165913368|gb|EDR31990.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|165922139|gb|EDR39316.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165990255|gb|EDR42556.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166207863|gb|EDR52343.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|166961680|gb|EDR57701.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167049545|gb|EDR60953.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167055156|gb|EDR64953.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|229680310|gb|EEO76409.1| Flagellar basal-body rod protein flgG [Yersinia pestis Nepal516]
 gi|229688946|gb|EEO81011.1| Flagellar basal-body rod protein flgG [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229693516|gb|EEO83565.1| Flagellar basal-body rod protein flgG [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229701167|gb|EEO89196.1| Flagellar basal-body rod protein flgG [Yersinia pestis Pestoides A]
 gi|262361786|gb|ACY58507.1| flagellar basal-body rod protein FlgG [Yersinia pestis D106004]
 gi|262366078|gb|ACY62635.1| flagellar basal-body rod protein FlgG [Yersinia pestis D182038]
 gi|270335147|gb|EFA45924.1| flagellar basal-body rod protein FlgG [Yersinia pestis KIM D27]
 gi|294354487|gb|ADE64828.1| flagellar basal-body rod protein FlgG [Yersinia pestis Z176003]
 gi|320015465|gb|ADV99036.1| Flagellar basal-body rod protein flgG [Yersinia pestis biovar
           Medievalis str. Harbin 35]
          Length = 232

 Score = 69.5 bits (168), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 23/126 (18%), Positives = 40/126 (31%), Gaps = 3/126 (2%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
            +  I  + L++   R  I+S  +   +    T         T      +   G    ++
Sbjct: 110 PAITIPANALSMTVGRDGIVSVTL---QGQTATQQVGQLTLTTFINNSGLESVGENLYQE 166

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
                +                G V+  NVNV  E  +M +T R Y  N + +  S  M+
Sbjct: 167 TASSGAPNETTPGLNGGGLLYQGYVETSNVNVAEELVNMIQTQRAYEINSKAVSTSDQML 226

Query: 126 TTTLDL 131
                L
Sbjct: 227 QKLAQL 232


>gi|120601522|ref|YP_965922.1| hypothetical protein Dvul_0472 [Desulfovibrio vulgaris DP4]
 gi|120561751|gb|ABM27495.1| protein of unknown function DUF1078 domain protein [Desulfovibrio
           vulgaris DP4]
          Length = 125

 Score = 69.1 bits (167), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 43/130 (33%), Gaps = 13/130 (10%)

Query: 8   AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
                + L      + + + NIAN  T G       Y               GVRV +I 
Sbjct: 3   IDTGWAALDAFGIGLGVTANNIANVNTDGFRASQTRYETGPG--------GEGVRVGEIR 54

Query: 68  VDQSTFVEEFDP-----GHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
              +                +     +V+  N +   E   M ET R + AN+ +I+   
Sbjct: 55  ESTTPGPLHEGMGIVEREGRMEQQRVLVEGSNTDTAREMVSMMETQRAHEANVASIRAHD 114

Query: 123 DMMTTTLDLL 132
           DM    LD++
Sbjct: 115 DMTGVVLDIM 124


>gi|121534936|ref|ZP_01666755.1| flagellar basal-body rod protein FlgG [Thermosinus carboxydivorans
           Nor1]
 gi|121306535|gb|EAX47458.1| flagellar basal-body rod protein FlgG [Thermosinus carboxydivorans
           Nor1]
          Length = 262

 Score = 69.1 bits (167), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 16/86 (18%), Positives = 28/86 (32%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                  +   G   +K+     +  V               ++  NV V+ E  +M   
Sbjct: 177 RFINPAGLDSIGRNLLKETAASGAPVVLNPGTDGAGTLVQQYLEMSNVQVVEEMVNMIVA 236

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y  N + I  + DM+    +L R
Sbjct: 237 QRAYEINAKAITTADDMLGQVANLKR 262



 Score = 44.1 bits (102), Expect = 0.007,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 25/61 (40%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ +   A SG+  Q A + +IS N+AN  TTG       ++            + G   
Sbjct: 1  MMRALWTAGSGMVAQQANVDVISNNLANVNTTGFKKSRTDFQDLMYQTIRQAGAATGADT 60

Query: 64 K 64
          +
Sbjct: 61 Q 61


>gi|242278484|ref|YP_002990613.1| flagellar basal body rod protein FlgG [Desulfovibrio salexigens DSM
           2638]
 gi|242121378|gb|ACS79074.1| flagellar basal-body rod protein FlgG [Desulfovibrio salexigens DSM
           2638]
          Length = 260

 Score = 68.7 bits (166), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 34/105 (32%)

Query: 29  IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASG 88
           IA     G    S          E  ++  G     +     +         +    A G
Sbjct: 156 IAALDKNGTELSSADITIYDFINEAGLNAVGKNLYVETEASGAAIQGTPGEDNFGTLAQG 215

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NV ++ E   +    R Y  N + I  S  M+ T +++ R
Sbjct: 216 YLEGSNVELVDEMVGLIVGQRAYETNSKAITTSDSMLQTAINVKR 260



 Score = 41.8 bits (96), Expect = 0.029,   Method: Composition-based stats.
 Identities = 13/91 (14%), Positives = 26/91 (28%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ S   A +G+  Q   + ++S N+AN  T G       +         +         
Sbjct: 1  MMRSLWTAATGMVAQQTHIDVLSNNLANVNTQGFKKSRVEFEDLMYQTMRIAGSETEGGN 60

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIVKYPN 94
          +     Q     +    H   +        N
Sbjct: 61 RLPTGMQIGMGVKEVSIHKFFSQGSFESTGN 91


>gi|302390533|ref|YP_003826354.1| flagellar basal-body rod protein FlgG [Thermosediminibacter oceani
           DSM 16646]
 gi|302201161|gb|ADL08731.1| flagellar basal-body rod protein FlgG [Thermosediminibacter oceani
           DSM 16646]
          Length = 268

 Score = 68.7 bits (166), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 43/113 (38%), Gaps = 7/113 (6%)

Query: 28  NI-ANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANA 86
           NI AN   TG     +     TI+    ++  G + V     +Q+    E+         
Sbjct: 156 NISANGTITGRDADGNIEEIGTIALARFLNPEGLLAVGNNLFEQTAASGEYQLKEDPNEP 215

Query: 87  ------SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
                  G ++  NV V+ E  ++    R Y  N + I+ + +M+    +L R
Sbjct: 216 GFGTILQGFLEMSNVQVVDEMVNLIVAQRAYEINTKAIQTADEMLGQANNLRR 268



 Score = 45.2 bits (105), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/78 (23%), Positives = 32/78 (41%), Gaps = 7/78 (8%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR-------RKTISFEEVMH 56
          ++ +   A+SG+  Q   + +IS N+AN  TTG       ++       R+   F+    
Sbjct: 1  MMRALWSASSGMLAQQLNVDVISNNLANVNTTGYKKSRVEFKDLLYETLRRPDVFQPGQG 60

Query: 57 GSGGVRVKKIGVDQSTFV 74
             G++V       ST  
Sbjct: 61 NPVGLQVGHGVRPASTTR 78


>gi|149184205|ref|ZP_01862523.1| flagellar basal-body rod protein FlgC [Erythrobacter sp. SD-21]
 gi|148831525|gb|EDL49958.1| flagellar basal-body rod protein FlgC [Erythrobacter sp. SD-21]
          Length = 113

 Score = 68.7 bits (166), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/113 (24%), Positives = 53/113 (46%), Gaps = 2/113 (1%)

Query: 22  MQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG--GVRVKKIGVDQSTFVEEFDP 79
           M   + N+ANA +   +        +T+  +E+   SG   VRV  +  + +  +   DP
Sbjct: 1   MNTAASNLANAGSVAGSEAEAYRPMRTVFEQELDRASGLSSVRVGGVVREDTAPIRRHDP 60

Query: 80  GHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           GHP+A+ +G V    V+   E  +M E +R Y   ++ +  +  +M  T+ + 
Sbjct: 61  GHPLADENGDVWEAPVDENAEMVEMLEASRQYRNMVEALSTAKQLMLETMRMK 113


>gi|302392939|ref|YP_003828759.1| flagellar basal-body rod protein FlgG [Acetohalobium arabaticum DSM
           5501]
 gi|302205016|gb|ADL13694.1| flagellar basal-body rod protein FlgG [Acetohalobium arabaticum DSM
           5501]
          Length = 262

 Score = 68.7 bits (166), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 18/86 (20%), Positives = 28/86 (32%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
             S    +   G     +        V           + G ++  NV V+ E  +M   
Sbjct: 177 RFSNPAGLKSIGRNLFAETPASGGPTVGVPAEDGFGTISQGYLEKGNVKVVEEMTNMIAA 236

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y  N + IK S  M+    +L R
Sbjct: 237 QRAYEVNSKAIKASDQMLQQANNLKR 262



 Score = 43.3 bits (100), Expect = 0.010,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 19/42 (45%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          +I S   A +G+  Q   +  IS N+AN  T G       ++
Sbjct: 1  MIRSLWTAATGMKAQQLNIDTISNNLANVNTNGFKKSRVNFQ 42


>gi|294500931|ref|YP_003564631.1| flagellar hook protein FlgE [Bacillus megaterium QM B1551]
 gi|294350868|gb|ADE71197.1| flagellar hook protein FlgE [Bacillus megaterium QM B1551]
          Length = 264

 Score = 68.7 bits (166), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 23/106 (21%), Positives = 40/106 (37%), Gaps = 1/106 (0%)

Query: 28  NIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANAS 87
           NI +A     TP +        +  E +  +GG    K     +  V            S
Sbjct: 160 NIIDANGNI-TPNTPTIELAKFANNEGLEKAGGNLFAKSVNSGNPLVGNPGASGTGTLVS 218

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             ++  NV++  E  DM    R + AN + I  S +++   ++L R
Sbjct: 219 SALEMSNVDLSEEFTDMIVAQRGFQANTRIITTSDEILQELVNLKR 264



 Score = 36.8 bits (83), Expect = 0.92,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 22/59 (37%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
          ++ S +   SG+     ++ ++  NIAN  T G   G   ++             G  R
Sbjct: 1  MLRSMYSGISGMKNFQTKLDVLGNNIANVNTYGYKKGRTTFQDLVSQQVAGATAPGANR 59


>gi|46581297|ref|YP_012105.1| flagellar basal-body rod protein [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|46450718|gb|AAS97365.1| flagellar basal-body rod protein, putative [Desulfovibrio vulgaris
           str. Hildenborough]
 gi|311234961|gb|ADP87815.1| protein of unknown function DUF1078 domain protein [Desulfovibrio
           vulgaris RCH1]
          Length = 125

 Score = 68.7 bits (166), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 22/125 (17%), Positives = 39/125 (31%), Gaps = 3/125 (2%)

Query: 8   AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
                + L      + + + NIAN  T G       Y          +            
Sbjct: 3   IDTGWAALDAFGIGLGVTANNIANVNTDGFRASQTRYETGPGGEGVRLGEIRESTTPGPL 62

Query: 68  VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
                 +   +    +     +V+  N +   E   M ET R + AN+ +I+   DM   
Sbjct: 63  H---EGMGIVEREGRMEQQRVLVEGSNTDTAREMVSMMETQRAHEANVASIRAHDDMTGV 119

Query: 128 TLDLL 132
            LD++
Sbjct: 120 VLDIM 124


>gi|302343757|ref|YP_003808286.1| flagellar basal-body rod protein FlgG [Desulfarculus baarsii DSM
           2075]
 gi|301640370|gb|ADK85692.1| flagellar basal-body rod protein FlgG [Desulfarculus baarsii DSM
           2075]
          Length = 260

 Score = 68.4 bits (165), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 26/108 (24%), Positives = 42/108 (38%), Gaps = 5/108 (4%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANA---- 86
           N   T  T   +      I      + SG + + +    +S       PG P A+     
Sbjct: 153 NGLVTALTADDEAVELGRIQLYTFPNPSGLMAIGRNYFRESPASGVAVPGDPGADQFGTL 212

Query: 87  -SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             G ++  NV+V+ E  +M    R Y AN ++I  S  M+ T   + R
Sbjct: 213 AQGFLEMSNVSVVDEMVNMIVAQRAYEANSKSITTSDQMLQTANQVKR 260



 Score = 42.6 bits (98), Expect = 0.021,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 21/41 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          ++ S + A +G+  Q   + +IS N+AN  TTG       +
Sbjct: 1  MMRSLYTAATGMTAQQLNLDVISNNLANVNTTGFKKSRADF 41


>gi|317492426|ref|ZP_07950855.1| flagellar basal-body rod protein FlgG [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316919765|gb|EFV41095.1| flagellar basal-body rod protein FlgG [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 260

 Score = 68.4 bits (165), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 23/127 (18%), Positives = 40/127 (31%), Gaps = 3/127 (2%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           + +  I  +   +   R  I+S N    +    T         T   +  +   G    +
Sbjct: 137 VPAITIPANATKLTIGRDGIVSVN---QQGQTATTQVGQLTLTTFINDAGLESVGENLYQ 193

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           +     +                G V+  NVNV  E  +M +T R Y  N + +  S  M
Sbjct: 194 ETESSGAPTESTPGLNGAGMLYQGYVETSNVNVAEELVNMIQTQRAYEINSKAVTTSDQM 253

Query: 125 MTTTLDL 131
           +     L
Sbjct: 254 LQRLTQL 260



 Score = 42.2 bits (97), Expect = 0.023,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 21/41 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I S +IA +GL  Q   M +I+ N+AN  T G       +
Sbjct: 1  MIRSLYIAKTGLEAQQTNMDVIANNLANVSTNGFKRQRAVF 41


>gi|238764394|ref|ZP_04625344.1| Flagellar basal-body rod protein flgG [Yersinia kristensenii ATCC
           33638]
 gi|238697420|gb|EEP90187.1| Flagellar basal-body rod protein flgG [Yersinia kristensenii ATCC
           33638]
          Length = 260

 Score = 68.4 bits (165), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 23/126 (18%), Positives = 39/126 (30%), Gaps = 3/126 (2%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
            +  I  + L +   R  I+S  +   +    T         T      +   G    ++
Sbjct: 138 PAITIPANALKMTIGRDGIVSVTL---QGQTATQQVGQLTLTTFINNSGLESVGENLYQE 194

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
                +                G V+  NVNV  E  +M +T R Y  N + +  S  M+
Sbjct: 195 TASSGAPNETTPGLNGGGLLYQGYVETSNVNVAEELVNMIQTQRAYEINSKAVSTSDQML 254

Query: 126 TTTLDL 131
                L
Sbjct: 255 QKLTQL 260



 Score = 44.1 bits (102), Expect = 0.007,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 20/41 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I S  IA +GL  Q   M +I+ N+AN  T G       +
Sbjct: 1  MIRSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVF 41


>gi|313141242|ref|ZP_07803435.1| flagellar basal-body rod protein distal rod protein [Helicobacter
           canadensis MIT 98-5491]
 gi|313130273|gb|EFR47890.1| flagellar basal-body rod protein distal rod protein [Helicobacter
           canadensis MIT 98-5491]
          Length = 262

 Score = 68.4 bits (165), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 17/86 (19%), Positives = 28/86 (32%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +H  G              V             G V+  NV ++ E  D+    
Sbjct: 177 FINPAGLHALGDNLYLNTNASGDPIVGTPGLNGFGQLRQGFVETSNVKLVEEMTDLIVGQ 236

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLRD 134
           R Y AN ++I+ +  M+     L R+
Sbjct: 237 RAYEANSKSIQTADSMLQIVNQLKRN 262



 Score = 35.6 bits (80), Expect = 2.5,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 19/41 (46%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          + + + A +G+  Q  ++ + S NI+N  T G       + 
Sbjct: 1  MRALYTATTGMLGQQLQIDVTSNNISNVNTFGYRKERAEFA 41


>gi|238794000|ref|ZP_04637618.1| Flagellar basal-body rod protein flgG [Yersinia intermedia ATCC
           29909]
 gi|238726632|gb|EEQ18168.1| Flagellar basal-body rod protein flgG [Yersinia intermedia ATCC
           29909]
          Length = 260

 Score = 68.4 bits (165), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 23/126 (18%), Positives = 40/126 (31%), Gaps = 3/126 (2%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
            +  I  + L++   R  I+S  +   +    T         T      +   G    ++
Sbjct: 138 PAITIPANALSMTVGRDGIVSVTL---QGQTATQQVGQLTLTTFINNSGLESIGENLYQE 194

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
                +                G V+  NVNV  E  +M +T R Y  N + +  S  M+
Sbjct: 195 TASSGAPNETTPGLNGGGLLYQGYVETSNVNVAEELVNMIQTQRAYEINSKAVSTSDQML 254

Query: 126 TTTLDL 131
                L
Sbjct: 255 QKLTQL 260



 Score = 43.7 bits (101), Expect = 0.008,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 21/61 (34%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I S  IA +GL  Q   M +I+ N+AN  T G       +                 + 
Sbjct: 1  MIRSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTMRQPGAQSSEQT 60

Query: 64 K 64
           
Sbjct: 61 T 61


>gi|51596013|ref|YP_070204.1| flagellar basal body rod protein FlgG [Yersinia pseudotuberculosis
           IP 32953]
 gi|153947499|ref|YP_001401288.1| flagellar basal body rod protein FlgG [Yersinia pseudotuberculosis
           IP 31758]
 gi|170024645|ref|YP_001721150.1| flagellar basal body rod protein FlgG [Yersinia pseudotuberculosis
           YPIII]
 gi|51589295|emb|CAH20916.1| flagellar basal-body rod protein FlgG (distal rod protein)
           [Yersinia pseudotuberculosis IP 32953]
 gi|152958994|gb|ABS46455.1| flagellar basal-body rod protein FlgG [Yersinia pseudotuberculosis
           IP 31758]
 gi|169751179|gb|ACA68697.1| flagellar basal-body rod protein FlgG [Yersinia pseudotuberculosis
           YPIII]
          Length = 260

 Score = 68.4 bits (165), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 23/126 (18%), Positives = 40/126 (31%), Gaps = 3/126 (2%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
            +  I  + L++   R  I+S  +   +    T         T      +   G    ++
Sbjct: 138 PAITIPANALSMTVGRDGIVSVTL---QGQTATQQVGQLTLTTFINNSGLESVGENLYQE 194

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
                +                G V+  NVNV  E  +M +T R Y  N + +  S  M+
Sbjct: 195 TASSGAPNETTPGLNGGGLLYQGYVETSNVNVAEELVNMIQTQRAYEINSKAVSTSDQML 254

Query: 126 TTTLDL 131
                L
Sbjct: 255 QKLAQL 260



 Score = 43.7 bits (101), Expect = 0.008,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 20/41 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I S  IA +GL  Q   M +I+ N+AN  T G       +
Sbjct: 1  MIRSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVF 41


>gi|220903671|ref|YP_002478983.1| flagellar basal body rod protein FlgG [Desulfovibrio desulfuricans
           subsp. desulfuricans str. ATCC 27774]
 gi|219867970|gb|ACL48305.1| flagellar basal-body rod protein FlgG [Desulfovibrio desulfuricans
           subsp. desulfuricans str. ATCC 27774]
          Length = 261

 Score = 68.4 bits (165), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 33/109 (30%)

Query: 26  SENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVAN 85
           S +IA     G           T      +   G                     +    
Sbjct: 153 SGHIAALDAQGQEIAGAEIPLYTFINYAGLDARGRNLFTPTEASGEAVEGIPGTDNVGTL 212

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
           A G ++  NV V+ E  +M    R Y  N ++I+ S  M+   + L R 
Sbjct: 213 AQGFLEMSNVEVVDEMVNMIVGQRAYEVNSKSIQTSDSMLGIAVQLKRS 261



 Score = 42.9 bits (99), Expect = 0.014,   Method: Composition-based stats.
 Identities = 14/92 (15%), Positives = 24/92 (26%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ S     +G+  Q   + +IS N+AN  TTG       +         +         
Sbjct: 1  MMRSLWTGATGMVAQQLNIDVISNNLANVNTTGFKKSRAEFEDLMYQTMRMAGSITEGDN 60

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIVKYPNV 95
          +     Q          H            N 
Sbjct: 61 RLPVGIQVGMGTRPTAVHKFFTQGDFQNTGNT 92


>gi|325295399|ref|YP_004281913.1| flagellar basal-body rod protein FlgG [Desulfurobacterium
           thermolithotrophum DSM 11699]
 gi|325065847|gb|ADY73854.1| flagellar basal-body rod protein FlgG [Desulfurobacterium
           thermolithotrophum DSM 11699]
          Length = 266

 Score = 68.0 bits (164), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 16/95 (16%), Positives = 31/95 (32%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           N      T      +         +   GG  + K          + +       A G +
Sbjct: 164 NTGGVQTTEEVGTIKLYRFINPAGLKALGGNLLVKTDASGEPVEGDPNTDGFGKLAQGFL 223

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           +  NVN++ E  ++    R Y  N + I  + +M+
Sbjct: 224 EASNVNIVEEMVNLIVAQRAYEVNSKGITTADEML 258



 Score = 46.0 bits (107), Expect = 0.001,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 19/41 (46%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          ++ +   + +G+  Q   + +IS NIAN  T G       +
Sbjct: 1  MLRALWTSATGMEAQQTNLDVISHNIANVNTVGFKKSRANF 41


>gi|242309754|ref|ZP_04808909.1| flagellar basal body rod protein FlgG [Helicobacter pullorum MIT
           98-5489]
 gi|239523755|gb|EEQ63621.1| flagellar basal body rod protein FlgG [Helicobacter pullorum MIT
           98-5489]
          Length = 263

 Score = 68.0 bits (164), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 17/86 (19%), Positives = 28/86 (32%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +H  G              V             G V+  NV ++ E  D+    
Sbjct: 178 FINPAGLHALGDNLYLNTNASGDPIVGTPGLNGFGQLRQGFVETSNVKLVEEMTDLIVGQ 237

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLRD 134
           R Y AN ++I+ +  M+     L R+
Sbjct: 238 RAYEANSKSIQTADSMLQIVNQLKRN 263



 Score = 37.5 bits (85), Expect = 0.63,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 20/42 (47%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ + + A +G+  Q  ++ + S NI+N  T G       + 
Sbjct: 1  MMRALYTATTGMLGQQLQIDVTSNNISNVNTFGYRKERAEFA 42


>gi|224417699|ref|ZP_03655705.1| flagellar basal body rod protein FlgG [Helicobacter canadensis MIT
           98-5491]
 gi|253827048|ref|ZP_04869933.1| flagellar distal rod protein FlgG [Helicobacter canadensis MIT
           98-5491]
 gi|253510454|gb|EES89113.1| flagellar distal rod protein FlgG [Helicobacter canadensis MIT
           98-5491]
          Length = 263

 Score = 68.0 bits (164), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 17/86 (19%), Positives = 28/86 (32%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +H  G              V             G V+  NV ++ E  D+    
Sbjct: 178 FINPAGLHALGDNLYLNTNASGDPIVGTPGLNGFGQLRQGFVETSNVKLVEEMTDLIVGQ 237

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLRD 134
           R Y AN ++I+ +  M+     L R+
Sbjct: 238 RAYEANSKSIQTADSMLQIVNQLKRN 263



 Score = 37.5 bits (85), Expect = 0.64,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 20/42 (47%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ + + A +G+  Q  ++ + S NI+N  T G       + 
Sbjct: 1  MMRALYTATTGMLGQQLQIDVTSNNISNVNTFGYRKERAEFA 42


>gi|254445900|ref|ZP_05059376.1| flagellar basal-body rod protein FlgG [Verrucomicrobiae bacterium
           DG1235]
 gi|198260208|gb|EDY84516.1| flagellar basal-body rod protein FlgG [Verrucomicrobiae bacterium
           DG1235]
          Length = 260

 Score = 68.0 bits (164), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 20/101 (19%), Positives = 33/101 (32%)

Query: 33  RTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKY 92
               D  G    +         +   GG   ++     +  V             G ++ 
Sbjct: 160 ADDSDVLGRGQLQTARFRNSSGLLALGGNLFRETDASGAPTVGNPGADGSGTLQQGYLET 219

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            NVN++ E  +M    R Y  N ++I+ S  MM     L R
Sbjct: 220 SNVNIVEEMVNMILAQRAYEINSKSIQTSDSMMQQVAQLKR 260



 Score = 41.8 bits (96), Expect = 0.031,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 25/60 (41%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +  S + A SG+  Q   + +IS NIAN  TTG       ++       + +    G  +
Sbjct: 1  MSISLYSAASGMEAQQTNLNVISNNIANVSTTGFKKSKVEFQDMFYQVPKSVGADSGGNI 60


>gi|186895116|ref|YP_001872228.1| flagellar basal body rod protein FlgG [Yersinia pseudotuberculosis
           PB1/+]
 gi|186698142|gb|ACC88771.1| flagellar basal-body rod protein FlgG [Yersinia pseudotuberculosis
           PB1/+]
          Length = 260

 Score = 68.0 bits (164), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 22/126 (17%), Positives = 39/126 (30%), Gaps = 3/126 (2%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
            +  I  + L++   R  I+S  +   +    T                +   G    ++
Sbjct: 138 PAITIPANALSMTVGRDGIVSVTL---QGQTATQQVGQLTLTIFINNSGLESVGENLYQE 194

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
                +                G V+  NVNV  E  +M +T R Y  N + +  S  M+
Sbjct: 195 TASSGAPNETTPGLNGGGLLYQGYVETSNVNVAEELVNMIQTQRAYEINSKAVSTSDQML 254

Query: 126 TTTLDL 131
                L
Sbjct: 255 QKLAQL 260



 Score = 43.7 bits (101), Expect = 0.008,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 20/41 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I S  IA +GL  Q   M +I+ N+AN  T G       +
Sbjct: 1  MIRSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVF 41


>gi|238751764|ref|ZP_04613252.1| Flagellar basal-body rod protein flgG [Yersinia rohdei ATCC 43380]
 gi|238710035|gb|EEQ02265.1| Flagellar basal-body rod protein flgG [Yersinia rohdei ATCC 43380]
          Length = 260

 Score = 68.0 bits (164), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 23/126 (18%), Positives = 40/126 (31%), Gaps = 3/126 (2%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
            +  I  + L++   R  I+S  +   +    T         T      +   G    ++
Sbjct: 138 PAITIPANALSMTVGRDGIVSVTL---QGQTATQQVGQLTLTTFINNSGLESMGENLYQE 194

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
                +                G V+  NVNV  E  +M +T R Y  N + +  S  M+
Sbjct: 195 TASSGAPNETTPGLNGGGLLYQGYVETSNVNVAEELVNMIQTQRAYEINSKAVSTSDQML 254

Query: 126 TTTLDL 131
                L
Sbjct: 255 QKLTQL 260



 Score = 43.3 bits (100), Expect = 0.010,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 20/41 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I S  IA +GL  Q   M +I+ N+AN  T G       +
Sbjct: 1  MIRSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVF 41


>gi|225619854|ref|YP_002721111.1| flagellar basal body rod protein FlgG [Brachyspira hyodysenteriae
           WA1]
 gi|225214673|gb|ACN83407.1| flagellar basal body rod protein FlgG [Brachyspira hyodysenteriae
           WA1]
          Length = 264

 Score = 67.6 bits (163), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 19/86 (22%), Positives = 32/86 (37%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
               +  +   G    K+       F  E           G V+  NV V+ E  DM   
Sbjct: 179 RFINQPGLLSIGDNLYKETIASGPAFEGEPGANGFPRIHQGFVEMSNVKVVDEMVDMIVA 238

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y  N + ++ S +++ T ++L R
Sbjct: 239 QRAYEMNSKAVQTSDNLLATVVNLKR 264



 Score = 40.6 bits (93), Expect = 0.072,   Method: Composition-based stats.
 Identities = 11/70 (15%), Positives = 21/70 (30%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ S   A SG+     +   I+ N+AN  T G       +        ++         
Sbjct: 1  MVRSLWTAASGMNGMQFKTDTIANNLANVNTIGYKKVRADFEDLIYQNLKIQGTPATEDT 60

Query: 64 KKIGVDQSTF 73
                Q+  
Sbjct: 61 VTPVGLQTGL 70


>gi|297570257|ref|YP_003691601.1| protein of unknown function DUF1078 domain protein [Desulfurivibrio
           alkaliphilus AHT2]
 gi|296926172|gb|ADH86982.1| protein of unknown function DUF1078 domain protein [Desulfurivibrio
           alkaliphilus AHT2]
          Length = 118

 Score = 67.6 bits (163), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 25/129 (19%), Positives = 51/129 (39%), Gaps = 12/129 (9%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           ++   H A SGL     +    + N AN  T G       Y++  ++  E +        
Sbjct: 1   MVTGIHSALSGLLALQQKTAATAHNTANVNTDG-------YKKVRVTLHEGVAPGTVEPR 53

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
            +        V+E       A    +V+  NV++  E  ++  + R Y ANL+ ++   +
Sbjct: 54  AEKIETPGPVVQE-----QTAAGPEMVEKSNVDLAQEMPNLMLSRRYYQANLKVVQSEDE 108

Query: 124 MMTTTLDLL 132
            + + L++ 
Sbjct: 109 RLGSLLNIK 117


>gi|15639944|ref|NP_219397.1| flagellar basal body rod protein FlgG [Treponema pallidum subsp.
           pallidum str. Nichols]
 gi|189026183|ref|YP_001933955.1| flagellar basal body rod protein FlgG [Treponema pallidum subsp.
           pallidum SS14]
 gi|3323281|gb|AAC65915.1| flagellar basal-body rod protein (flgG-1) [Treponema pallidum
           subsp. pallidum str. Nichols]
 gi|189018758|gb|ACD71376.1| flagellar basal-body rod protein [Treponema pallidum subsp.
           pallidum SS14]
 gi|291060315|gb|ADD73050.1| flagellar basal-body rod protein FlgG [Treponema pallidum subsp.
           pallidum str. Chicago]
          Length = 264

 Score = 67.6 bits (163), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 15/86 (17%), Positives = 28/86 (32%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
             +    +   GG    +                        ++  NV+ + E  +M   
Sbjct: 179 RFANNAGLAAEGGNVFTQTPASGQPIPGRPGFEGFGKVEHKFLEMSNVSTVSEMVNMIVA 238

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y  N + I+ S +M+ T + L R
Sbjct: 239 QRAYEFNSKAIQTSDNMLGTAVALKR 264



 Score = 43.3 bits (100), Expect = 0.011,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 33/75 (44%), Gaps = 7/75 (9%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ S   A +G+  Q A +  ++ N+AN  T+G       ++R+   FE++++ +     
Sbjct: 1  MVRSLWTAATGMNGQQANIDTVANNLANVNTSG-------FKRQRAEFEDLLYQTIRTAG 53

Query: 64 KKIGVDQSTFVEEFD 78
               D  T V    
Sbjct: 54 TPATEDTLTPVGVRM 68


>gi|85710162|ref|ZP_01041227.1| flagellar cell-proximal portion protein [Erythrobacter sp. NAP1]
 gi|85688872|gb|EAQ28876.1| flagellar cell-proximal portion protein [Erythrobacter sp. NAP1]
          Length = 125

 Score = 67.6 bits (163), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 27/119 (22%), Positives = 53/119 (44%), Gaps = 2/119 (1%)

Query: 14  GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG--GVRVKKIGVDQS 71
            ++ Q  RM + + N+ANA +   +        + +   E+   SG   V+   I     
Sbjct: 5   AMSAQLVRMNVATSNLANAGSVASSEAEAYRPMRAVFRAELDRASGLSSVQTAGITQSNE 64

Query: 72  TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
              + +DP HP+A+ +G V    V+   E  ++ ++ R Y   +Q ++ +  +M  TL 
Sbjct: 65  APSKRYDPSHPLADETGHVFEAPVDESAEMVEIMDSARQYQNMVQALQTAKQLMLETLR 123


>gi|123442782|ref|YP_001006759.1| flagellar basal-body rod protein FlgG [Yersinia enterocolitica
           subsp. enterocolitica 8081]
 gi|122089743|emb|CAL12596.1| flagellar basal-body rod protein FlgG [Yersinia enterocolitica
           subsp. enterocolitica 8081]
          Length = 217

 Score = 67.6 bits (163), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 22/128 (17%), Positives = 40/128 (31%), Gaps = 3/128 (2%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +  +  I  + +++   R  I+S  +        T         T      +   G    
Sbjct: 93  IQPAITIPANAMSMTVGRDGIVSVTL---PGQTATQQVGQLTLATFINNSGLESVGENLY 149

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
           ++     +                G V+  NVNV  E  +M +T R Y  N + +  S  
Sbjct: 150 QETASSGAPNETTPGLNGGGLLYQGYVETSNVNVAEELVNMIQTQRAYEINSKAVSTSDQ 209

Query: 124 MMTTTLDL 131
           M+     L
Sbjct: 210 MLQKLTQL 217


>gi|300871597|ref|YP_003786470.1| flagellar basal-body rod protein FlgG [Brachyspira pilosicoli
           95/1000]
 gi|300689298|gb|ADK31969.1| flagellar basal-body rod protein, FlgG [Brachyspira pilosicoli
           95/1000]
          Length = 264

 Score = 67.6 bits (163), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 19/86 (22%), Positives = 32/86 (37%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
               +  +   G    K+       F  E           G V+  NV V+ E  DM   
Sbjct: 179 RFINQAGLLSIGDNLYKETIASGPAFEGEAGSKGFPRIHQGFVEMSNVKVVDEMVDMIVA 238

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y  N + ++ S +++ T ++L R
Sbjct: 239 QRAYEMNSKAVQTSDNLLATVVNLKR 264



 Score = 40.6 bits (93), Expect = 0.064,   Method: Composition-based stats.
 Identities = 11/70 (15%), Positives = 21/70 (30%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ S   A SG+     +   I+ N+AN  T G       +        ++         
Sbjct: 1  MLRSLWTAASGMNGMQFKTDTIANNLANVNTIGYKKVRADFEDLIYQNLKIQGTPATEDT 60

Query: 64 KKIGVDQSTF 73
                Q+  
Sbjct: 61 VTPVGLQTGL 70


>gi|238785495|ref|ZP_04629478.1| Flagellar basal-body rod protein flgG [Yersinia bercovieri ATCC
           43970]
 gi|238713597|gb|EEQ05626.1| Flagellar basal-body rod protein flgG [Yersinia bercovieri ATCC
           43970]
          Length = 260

 Score = 67.6 bits (163), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 23/129 (17%), Positives = 41/129 (31%), Gaps = 3/129 (2%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            +  +  I  + L++   R  I+S  +   +    T         T      +   G   
Sbjct: 135 PVQPAITIPANALSMTVGRDGIVSVTL---QGQTATQQVGQLTLTTFINNSGLESMGENL 191

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
            ++     +                G V+  NVNV  E  +M +T R Y  N + +  S 
Sbjct: 192 YQETASSGAPNDTTPGLNGGGLLYQGYVETSNVNVAEELVNMIQTQRAYEINSKAVSTSD 251

Query: 123 DMMTTTLDL 131
            M+     L
Sbjct: 252 QMLQKLTQL 260



 Score = 43.3 bits (100), Expect = 0.010,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 21/61 (34%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I S  IA +GL  Q   M +I+ N+AN  T G       +                 + 
Sbjct: 1  MIRSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTMRQPGAQSSEQT 60

Query: 64 K 64
           
Sbjct: 61 T 61


>gi|237752808|ref|ZP_04583288.1| flagellar basal-body rod protein distal rod protein [Helicobacter
           winghamensis ATCC BAA-430]
 gi|229376297|gb|EEO26388.1| flagellar basal-body rod protein distal rod protein [Helicobacter
           winghamensis ATCC BAA-430]
          Length = 263

 Score = 67.6 bits (163), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 18/86 (20%), Positives = 29/86 (33%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +H  G              V           A G V+  NV ++ E  D+    
Sbjct: 178 FINPAGLHALGDNLYLNTNASGDPIVGTPGLNGFGQLAQGFVETSNVKLVEEMTDLIVGQ 237

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLRD 134
           R Y AN ++I+ +  M+     L R+
Sbjct: 238 RAYEANSKSIQTADSMLQIVNQLKRN 263



 Score = 37.2 bits (84), Expect = 0.70,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 20/42 (47%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ + + A +G+  Q  ++ + S NI+N  T G       + 
Sbjct: 1  MMRALYTATTGMLGQQLQIDVTSNNISNVNTFGYRKERAEFA 42


>gi|94987183|ref|YP_595116.1| flagellar basal body rod protein FlgG [Lawsonia intracellularis
           PHE/MN1-00]
 gi|94731432|emb|CAJ54795.1| Flagellar basal body L-ring protein [Lawsonia intracellularis
           PHE/MN1-00]
          Length = 261

 Score = 67.6 bits (163), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 19/106 (17%), Positives = 31/106 (29%)

Query: 29  IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASG 88
           I      G    +      +      +   G                     +    A G
Sbjct: 156 ITALDANGQEIAAGEIPLYSFVNPAGLDAKGRNLYIPTEASGEAVEGVPGEENLGTIAQG 215

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
            ++  NV V+ E   M    R Y  N + I+ S +M+ T + L R 
Sbjct: 216 FLEMSNVEVVDEMVQMIVGQRAYEMNSKAIQTSDNMLQTAVQLKRS 261



 Score = 43.3 bits (100), Expect = 0.010,   Method: Composition-based stats.
 Identities = 14/91 (15%), Positives = 27/91 (29%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ S   A +G+  Q   + +IS N+AN  T+G       +        ++   +     
Sbjct: 1  MMRSLWTAATGMVAQQLNIDVISNNLANTNTSGFKKSRAEFEDLMYQTMKIAGSATDGDN 60

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIVKYPN 94
          +     Q          H            N
Sbjct: 61 RIPVGIQVGMGVRPTAVHKFFTQGDFQNTGN 91


>gi|256830176|ref|YP_003158904.1| flagellar basal-body rod protein FlgG [Desulfomicrobium baculatum
           DSM 4028]
 gi|256579352|gb|ACU90488.1| flagellar basal-body rod protein FlgG [Desulfomicrobium baculatum
           DSM 4028]
          Length = 260

 Score = 67.6 bits (163), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 18/102 (17%), Positives = 30/102 (29%)

Query: 32  ARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVK 91
               G           T      +   G     +               +    A G ++
Sbjct: 159 VDKAGAEIAGTDIPVYTFVNPAGLKAMGRNLYVQTDGSGEAVESVPGENNAGTLAQGFLE 218

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             NV ++ E  +M    R Y AN ++I  +  M+ T   L R
Sbjct: 219 MSNVEIVEEMVNMIVGQRAYEANSKSITTADMMLQTANQLKR 260



 Score = 46.8 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/91 (15%), Positives = 27/91 (29%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I +   + SG+  Q   + + + N+AN  TTG       +        ++   S     
Sbjct: 1  MIRALWTSASGMIAQQLNLDVTANNLANVNTTGFKKNRAEFEDLMYQNMKIAGSSNQEGD 60

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIVKYPN 94
          +     Q          H +          N
Sbjct: 61 RLPVGMQVGMGVRPVSVHKIFTQGDFQNTGN 91


>gi|296127366|ref|YP_003634618.1| flagellar basal-body rod protein FlgG [Brachyspira murdochii DSM
           12563]
 gi|296019182|gb|ADG72419.1| flagellar basal-body rod protein FlgG [Brachyspira murdochii DSM
           12563]
          Length = 264

 Score = 67.6 bits (163), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 19/86 (22%), Positives = 32/86 (37%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
               +  +   G    K+       F  E           G V+  NV V+ E  DM   
Sbjct: 179 RFINQPGLLSIGDNLYKETIASGPAFEGEPGANGFPRIHQGFVEMSNVKVVDEMVDMIVA 238

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y  N + ++ S +++ T ++L R
Sbjct: 239 QRAYEMNSKAVQTSDNLLATVVNLKR 264



 Score = 40.6 bits (93), Expect = 0.077,   Method: Composition-based stats.
 Identities = 11/70 (15%), Positives = 22/70 (31%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ S   A SG+     +   I+ N+AN  T G       +        ++         
Sbjct: 1  MVRSLWTAASGMNGMQFKTDTIANNLANVNTIGYKKVRADFEDLIYQNLKIQGTPATEDT 60

Query: 64 KKIGVDQSTF 73
           +    Q+  
Sbjct: 61 VRPVGLQTGL 70


>gi|224370168|ref|YP_002604332.1| FlgG1 [Desulfobacterium autotrophicum HRM2]
 gi|223692885|gb|ACN16168.1| FlgG1 [Desulfobacterium autotrophicum HRM2]
          Length = 117

 Score = 67.6 bits (163), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 44/128 (34%), Gaps = 13/128 (10%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +  + + + S L     +M + + N+AN  +               S   V  G      
Sbjct: 1   MGFAINTSASALKAFGTKMAVSANNVANVYSDDF----------KKSRALVTEGQNDAVK 50

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
             I    +    E    +  A      +  N ++  E  D   T R + AN +TI+    
Sbjct: 51  VDISKVDTGGPVETRMMNGEAVVP---ELSNTDLAGEFTDQIITQRAFEANTRTIQTEDQ 107

Query: 124 MMTTTLDL 131
           M+ T LD+
Sbjct: 108 MLGTLLDI 115


>gi|332161324|ref|YP_004297901.1| flagellar basal-body rod protein FlgG [Yersinia enterocolitica
           subsp. palearctica 105.5R(r)]
 gi|318605244|emb|CBY26742.1| flagellar basal-body rod protein FlgG [Yersinia enterocolitica
           subsp. palearctica Y11]
 gi|325665554|gb|ADZ42198.1| flagellar basal-body rod protein FlgG [Yersinia enterocolitica
           subsp. palearctica 105.5R(r)]
 gi|330860604|emb|CBX70901.1| flagellar basal-body rod protein flgG [Yersinia enterocolitica
           W22703]
          Length = 260

 Score = 67.6 bits (163), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 22/128 (17%), Positives = 40/128 (31%), Gaps = 3/128 (2%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +  +  I  + +++   R  I+S  +        T         T      +   G    
Sbjct: 136 IQPAITIPANAMSMTVGRDGIVSVTL---PGQTATQQVGQLTLATFINNSGLESVGENLY 192

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
           ++     +                G V+  NVNV  E  +M +T R Y  N + +  S  
Sbjct: 193 QETASSGAPNETTPGLNGGGLLYQGYVETSNVNVAEELVNMIQTQRAYEINSKAVSTSDQ 252

Query: 124 MMTTTLDL 131
           M+     L
Sbjct: 253 MLQKLTQL 260



 Score = 43.3 bits (100), Expect = 0.010,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 21/61 (34%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I S  IA +GL  Q   M +I+ N+AN  T G       +                 + 
Sbjct: 1  MIRSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTMRQPGAQSSEQT 60

Query: 64 K 64
           
Sbjct: 61 T 61


>gi|238758108|ref|ZP_04619288.1| Flagellar basal-body rod protein flgG [Yersinia aldovae ATCC 35236]
 gi|238703646|gb|EEP96183.1| Flagellar basal-body rod protein flgG [Yersinia aldovae ATCC 35236]
          Length = 260

 Score = 67.2 bits (162), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 23/128 (17%), Positives = 39/128 (30%), Gaps = 3/128 (2%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +  +  I  + L +   R  I+S  +        T         T      +   G    
Sbjct: 136 IQPAITIPANALKMTVGRDGIVSVTL---PGQTATQQVGQLTLTTFINNSGLESVGENLY 192

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
           ++     +                G V+  NVNV  E  +M +T R Y  N + +  S  
Sbjct: 193 QETASSGAPNETTPGLNGGGLLYQGYVETSNVNVAEELVNMIQTQRAYEINSKAVSTSDQ 252

Query: 124 MMTTTLDL 131
           M+     L
Sbjct: 253 MLQKLTQL 260



 Score = 44.5 bits (103), Expect = 0.005,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 21/61 (34%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I S  IA +GL  Q   M +I+ N+AN  T G       +                 + 
Sbjct: 1  MIPSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTMRQPGAQSSEQT 60

Query: 64 K 64
           
Sbjct: 61 T 61


>gi|34558104|ref|NP_907919.1| flagellar basal body rod protein FlgG [Wolinella succinogenes DSM
           1740]
 gi|34483822|emb|CAE10819.1| FLAGELLAR BASAL-BODY ROD PROTEIN DISTAL ROD PROTEIN [Wolinella
           succinogenes]
          Length = 263

 Score = 67.2 bits (162), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 19/87 (21%), Positives = 31/87 (35%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
           T      +H  G              V+            G V+  NV ++ E  D+   
Sbjct: 177 TFINPAGLHSLGDNLYLNTNASGDPIVDTPGLNGFGQLRQGFVELSNVKLVEEMTDLITG 236

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLRD 134
            R Y AN ++I+ +  M+ T   L R+
Sbjct: 237 QRAYEANSKSIQTADSMLQTVNSLKRN 263



 Score = 38.7 bits (88), Expect = 0.25,   Method: Composition-based stats.
 Identities = 13/91 (14%), Positives = 27/91 (29%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ + + A +G+  Q  ++ + S NIAN  T G       +        E    S     
Sbjct: 1  MMRALYTATTGMMGQQLQIDVTSNNIANVNTIGYKKQRAEFADLFYQVMEYAGSSTSETT 60

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIVKYPN 94
                +            + +     +  N
Sbjct: 61 LSPTGIEVGLGVRPTAITKIFSQGNFKETGN 91


>gi|332525064|ref|ZP_08401244.1| flagellar basal-body rod protein FlgG [Rubrivivax benzoatilyticus
           JA2]
 gi|332108353|gb|EGJ09577.1| flagellar basal-body rod protein FlgG [Rubrivivax benzoatilyticus
           JA2]
          Length = 260

 Score = 67.2 bits (162), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 26/129 (20%), Positives = 38/129 (29%), Gaps = 3/129 (2%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            +     I      V  A    +    A    T  T G    +         +   GG  
Sbjct: 135 PVQPGITIPADAKTVTVADDGTVQVTTA-GNATPTTVGQ--LQLANFINPAGLESLGGNL 191

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
             +     +            A   G V+  NVNV+ E  +M  T R Y  N + I+ S 
Sbjct: 192 YAETAASGTPNTGTPGTNELGALQQGFVETSNVNVVEELVNMIATQRAYELNSKAIQTSD 251

Query: 123 DMMTTTLDL 131
            M+     L
Sbjct: 252 QMLQKLGQL 260



 Score = 42.6 bits (98), Expect = 0.020,   Method: Composition-based stats.
 Identities = 13/38 (34%), Positives = 21/38 (55%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGS 41
          ++ S  IA +G+  Q  ++ +IS N+AN  T G   G 
Sbjct: 1  MLRSLWIAKTGMEGQQTKLDVISNNLANVGTNGFKRGG 38


>gi|78358198|ref|YP_389647.1| flagellar basal body rod protein FlgG [Desulfovibrio desulfuricans
           subsp. desulfuricans str. G20]
 gi|78220603|gb|ABB39952.1| Flagellar basal body rod protein [Desulfovibrio desulfuricans
           subsp. desulfuricans str. G20]
          Length = 261

 Score = 67.2 bits (162), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 39/112 (34%), Gaps = 2/112 (1%)

Query: 24  IISEN--IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGH 81
           +++EN  IA     G+   +      T      +  +G                     +
Sbjct: 149 VVTENGHIAALDKNGEELAAADIPLYTFINPAGLQAAGRNLYLASEASGVAVEGVPGEDN 208

Query: 82  PVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
               A G ++  NV V+ E  +M    R Y  N + I+ S +M+ T   L R
Sbjct: 209 VGTIAQGFLEMSNVEVVDEMVNMIVGQRAYEMNSKAIQASDNMLQTATQLKR 260



 Score = 45.2 bits (105), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/91 (16%), Positives = 25/91 (27%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ S   A +G+  Q   +  IS N+AN  T G       +        ++     G   
Sbjct: 1  MMRSLWTAATGMIAQQLNIDTISNNLANVNTLGFKKSRAEFEDLMYQNMKIAGSVTGNDQ 60

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIVKYPN 94
          +     Q          H            N
Sbjct: 61 RIPTGIQVGLGVRPTTVHKFFTQGDYSNTGN 91


>gi|238799109|ref|ZP_04642565.1| Flagellar basal-body rod protein flgG [Yersinia mollaretii ATCC
           43969]
 gi|238717056|gb|EEQ08916.1| Flagellar basal-body rod protein flgG [Yersinia mollaretii ATCC
           43969]
          Length = 260

 Score = 67.2 bits (162), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 22/126 (17%), Positives = 40/126 (31%), Gaps = 3/126 (2%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
            +  +  + L++   R  I+S  +   +    T         T      +   G    ++
Sbjct: 138 PAITVPANALSMTVGRDGIVSVTL---QGQTATQQVGQLTLTTFINNSGLESIGENLYQE 194

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
                +                G V+  NVNV  E  +M +T R Y  N + +  S  M+
Sbjct: 195 TASSGAPNETTPGLNGGGLLYQGYVETSNVNVAEELVNMIQTQRAYEINSKAVSTSDQML 254

Query: 126 TTTLDL 131
                L
Sbjct: 255 QKLTQL 260



 Score = 43.7 bits (101), Expect = 0.008,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 21/61 (34%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I S  IA +GL  Q   M +I+ N+AN  T G       +                 + 
Sbjct: 1  MIRSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTMRQPGAQSSEQT 60

Query: 64 K 64
           
Sbjct: 61 T 61


>gi|307266107|ref|ZP_07547652.1| flagellar basal-body rod protein FlgG [Thermoanaerobacter wiegelii
           Rt8.B1]
 gi|306918889|gb|EFN49118.1| flagellar basal-body rod protein FlgG [Thermoanaerobacter wiegelii
           Rt8.B1]
          Length = 266

 Score = 67.2 bits (162), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 33/105 (31%)

Query: 29  IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASG 88
           I+     G T              + +   G    +           +   G       G
Sbjct: 162 ISVKNPDGTTQEVATLGIYNFVNPQGLLSVGSNLYEPTEASGQPGTRDDFQGRMGKVMQG 221

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NV V+ E  DM    R Y  N + I+ + +M+    +L R
Sbjct: 222 FLETSNVQVVKEMVDMIAAQRAYEINSKAIQAADEMLGIANNLRR 266



 Score = 44.9 bits (104), Expect = 0.004,   Method: Composition-based stats.
 Identities = 11/90 (12%), Positives = 26/90 (28%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ +     +G+  Q   + +I+ N+AN  TT        ++       +  +  GG   
Sbjct: 1  MMRALWSVATGMTAQQLNVDVIANNLANVNTTAFKRDRAEFKDLIYQTLQRENVYGGQGK 60

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
                                +    + P
Sbjct: 61 PVNMQVGVGVRPSAIVKDFTEGSLQQTENP 90


>gi|330721006|gb|EGG99167.1| Flagellar basal-body rod protein FlgG [gamma proteobacterium
           IMCC2047]
          Length = 261

 Score = 67.2 bits (162), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 39/124 (31%), Gaps = 3/124 (2%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            L  S  +  + L +      +IS   A    +         +         +   GG  
Sbjct: 135 ELQPSITVPANTLNITIGSDGVIS---ATVAGSSTPTQIGDIQLAEFINPTGLQAIGGNL 191

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
            K+     +                G+++  NVN++ E  DM  T R Y  N + I  S 
Sbjct: 192 YKETAASGTPTTGTPGLSGRGTIEQGVLENSNVNIVEELVDMITTQRAYEMNTKVISTSD 251

Query: 123 DMMT 126
            M+ 
Sbjct: 252 QMLQ 255



 Score = 41.8 bits (96), Expect = 0.036,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 24/61 (39%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++AS  I+ +GL+ Q   +  IS N+AN  TTG       ++                  
Sbjct: 1  MLASLWISKTGLSAQDQALASISNNLANVSTTGYKRERAVFQDLLYPVHTQPGAQSSQST 60

Query: 64 K 64
          +
Sbjct: 61 Q 61


>gi|295706277|ref|YP_003599352.1| flagellar hook protein FlgE [Bacillus megaterium DSM 319]
 gi|294803936|gb|ADF41002.1| flagellar hook protein FlgE [Bacillus megaterium DSM 319]
          Length = 263

 Score = 67.2 bits (162), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 20/106 (18%), Positives = 40/106 (37%), Gaps = 2/106 (1%)

Query: 28  NIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANAS 87
           NI +A     +  +    +   +  E +  +GG    +        V         +  S
Sbjct: 160 NIIDANGNISSNQTVELAK--FANNEGLQKAGGNLFAQSVNSGGPLVGAPGANGTGSFVS 217

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             ++  NV++  E  DM    R + AN + I  S +++   ++L R
Sbjct: 218 SALEMSNVDLSEEFTDMIVAQRGFQANTRIITTSDEILQELVNLKR 263



 Score = 36.8 bits (83), Expect = 1.1,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 22/59 (37%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
          ++ S +   SG+     ++ ++  NIAN  T G   G   ++             G  R
Sbjct: 1  MLRSMYSGISGMKNFQTKLDVLGNNIANVNTYGYKKGRTTFQDLVSQQVAGATAPGANR 59


>gi|262166284|ref|ZP_06034021.1| flagellar basal-body rod protein FlgC [Vibrio mimicus VM223]
 gi|262026000|gb|EEY44668.1| flagellar basal-body rod protein FlgC [Vibrio mimicus VM223]
          Length = 71

 Score = 67.2 bits (162), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 26/69 (37%), Positives = 36/69 (52%)

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
            I       V EF+P HP+AN  G +  PNVNV+ E A+M   +R Y  N+Q    S  M
Sbjct: 3   GIVESDKPLVAEFNPEHPLANDEGYIYKPNVNVMEEMANMISASRSYQTNVQVADASKQM 62

Query: 125 MTTTLDLLR 133
           +  TL + +
Sbjct: 63  LLRTLQMGQ 71


>gi|157363239|ref|YP_001470006.1| flagellar basal-body rod protein FlgG [Thermotoga lettingae TMO]
 gi|157313843|gb|ABV32942.1| flagellar basal-body rod protein FlgG [Thermotoga lettingae TMO]
          Length = 261

 Score = 67.2 bits (162), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 17/86 (19%), Positives = 29/86 (33%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                  +   G     +            +     A   G ++  NV+V+ E  DM   
Sbjct: 176 RFVNPSGLKAVGDNLYLETTASGEPIEGTPNQDGFGALQQGYLEKANVDVVKEMVDMITA 235

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y  N + I+ + +M+ T   L R
Sbjct: 236 QRAYELNARAIQTADNMLQTVSTLKR 261



 Score = 40.6 bits (93), Expect = 0.069,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 22/42 (52%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S + A +G+  Q  ++  IS N+AN  TTG       ++
Sbjct: 1  MMVSLYSAATGMWAQQYKLDTISNNLANVDTTGYKKVRAEFQ 42


>gi|238788317|ref|ZP_04632111.1| Flagellar basal-body rod protein flgG [Yersinia frederiksenii ATCC
           33641]
 gi|238723563|gb|EEQ15209.1| Flagellar basal-body rod protein flgG [Yersinia frederiksenii ATCC
           33641]
          Length = 260

 Score = 66.8 bits (161), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 23/128 (17%), Positives = 41/128 (32%), Gaps = 3/128 (2%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +  +  I  + L++   R  I+S  +   +    T         T      +   G    
Sbjct: 136 IQPAITIPANALSMTVGRDGIVSVTL---QGQTATQQVGQLTLTTFINNSGLESVGENLY 192

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
           ++     +                G V+  NVNV  E  +M +T R Y  N + +  S  
Sbjct: 193 QETASSGAPNDSTPGLNGAGLLYQGYVETSNVNVAEELVNMIQTQRAYEINSKAVSTSDQ 252

Query: 124 MMTTTLDL 131
           M+     L
Sbjct: 253 MLQKLTQL 260



 Score = 43.7 bits (101), Expect = 0.009,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 21/61 (34%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I S  IA +GL  Q   M +I+ N+AN  T G       +                 + 
Sbjct: 1  MIRSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTMRQPGAQSSEQT 60

Query: 64 K 64
           
Sbjct: 61 T 61


>gi|319790434|ref|YP_004152067.1| flagellar basal-body rod protein FlgG [Thermovibrio ammonificans
           HB-1]
 gi|317114936|gb|ADU97426.1| flagellar basal-body rod protein FlgG [Thermovibrio ammonificans
           HB-1]
          Length = 266

 Score = 66.8 bits (161), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 32/102 (31%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           N      T  +   +         +   GG    +          + +         G +
Sbjct: 164 NTGGQQVTEEAGTIKLYRFINPAGLKAIGGNLFVQTEASGEPIEGDPNTDGFGKLTQGFL 223

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NVN++ E  ++    R Y  N + I  + +M+ T   L 
Sbjct: 224 EASNVNIVEEMVNLIVAQRAYEINSKGIIAADEMLRTVASLK 265



 Score = 47.6 bits (111), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 19/41 (46%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          ++ +   + SG+  Q   + +IS NIAN  T G       +
Sbjct: 1  MLRALWTSASGMEAQQTNLDVISNNIANVNTVGFKRSRANF 41


>gi|114566479|ref|YP_753633.1| flagellar basal-body rod protein FlgG [Syntrophomonas wolfei subsp.
           wolfei str. Goettingen]
 gi|114337414|gb|ABI68262.1| flagellar basal-body rod protein FlgG [Syntrophomonas wolfei subsp.
           wolfei str. Goettingen]
          Length = 261

 Score = 66.8 bits (161), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 16/86 (18%), Positives = 32/86 (37%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                  +   G    +           + D  + V+  +G ++  NV ++ E  ++   
Sbjct: 176 KFINPAGLQKIGKNLYRATPNSGEAEEWQPDSDNSVSLEAGYLEMSNVQIVEEMVNLITA 235

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y  N + I  S +M+ T  +L R
Sbjct: 236 QRAYEINSKVIISSDEMLQTAANLRR 261



 Score = 39.5 bits (90), Expect = 0.16,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 21/42 (50%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S + A+SG+  Q   +  +S N+AN  T G       ++
Sbjct: 1  MMRSLYTASSGMYAQQLNIDTLSHNMANVNTVGFKKQRLEFQ 42


>gi|298529926|ref|ZP_07017328.1| flagellar basal-body rod protein FlgG [Desulfonatronospira
           thiodismutans ASO3-1]
 gi|298509300|gb|EFI33204.1| flagellar basal-body rod protein FlgG [Desulfonatronospira
           thiodismutans ASO3-1]
          Length = 260

 Score = 66.8 bits (161), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 16/106 (15%), Positives = 32/106 (30%)

Query: 28  NIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANAS 87
           NI       +                 ++ +G     +               +  +  S
Sbjct: 155 NIVCVDGDDNVIAEGEIPIYRFMNPAGLNSAGRNLYSETEASGPATEGVPGEENFGSIRS 214

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  NV ++ E  +M    R Y  N + I+ S  M+     + R
Sbjct: 215 GALESSNVEIVDEMVNMIIGQRAYEINSKAIQTSDQMLQMANQMKR 260



 Score = 41.8 bits (96), Expect = 0.034,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 18/39 (46%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSD 42
          ++ S   A +G+A Q   + + S N+AN  T G      
Sbjct: 1  MMRSLWTAATGMAAQQMNIDVTSNNLANVNTDGFKKSQA 39


>gi|326389274|ref|ZP_08210842.1| flagellar basal-body rod protein FlgG [Thermoanaerobacter
           ethanolicus JW 200]
 gi|325994637|gb|EGD53061.1| flagellar basal-body rod protein FlgG [Thermoanaerobacter
           ethanolicus JW 200]
          Length = 266

 Score = 66.8 bits (161), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 33/105 (31%)

Query: 29  IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASG 88
           I+     G T              + +   G    +           +   G       G
Sbjct: 162 ISVKNPDGTTQEVATLGIYNFVNPQGLLSVGSNLYEPTEASGQPGTRDDFQGRMGKVMQG 221

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NV V+ E  DM    R Y  N + I+ + +M+    +L R
Sbjct: 222 FLETSNVQVVKEMVDMIAAQRAYEINSKAIQAADEMLGIANNLRR 266



 Score = 47.2 bits (110), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 12/90 (13%), Positives = 27/90 (30%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ +   A +G+  Q   + +I+ N+AN  TT        ++       +  +  GG   
Sbjct: 1  MMRALWSAATGMTAQQLNVDVIANNLANVNTTAFKRDRAEFKDLIYQTLQRENVYGGQGK 60

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
                                +    + P
Sbjct: 61 PVNMQVGVGVRPSAIVKDFTEGSLQQTENP 90


>gi|269138584|ref|YP_003295284.1| flagellar basal body rod protein [Edwardsiella tarda EIB202]
 gi|267984244|gb|ACY84073.1| flagellar basal body rod protein [Edwardsiella tarda EIB202]
 gi|304558594|gb|ADM41258.1| Flagellar basal-body rod protein FlgG [Edwardsiella tarda FL6-60]
          Length = 260

 Score = 66.8 bits (161), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 22/127 (17%), Positives = 39/127 (30%), Gaps = 3/127 (2%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
             +  I  +  ++   R  I+S  +   +              T   +  +   G    +
Sbjct: 137 TPAITIPANATSMTIGRDGIVSVTL---QGQAAAQQVGQLTLSTFINDAGLESVGENLYQ 193

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           +     +                G V+  NVNV  E  +M +T R Y  N + I  S  M
Sbjct: 194 ETESSGAPTESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQTQRAYEINSKAISTSDQM 253

Query: 125 MTTTLDL 131
           +     L
Sbjct: 254 LQRLTQL 260



 Score = 42.6 bits (98), Expect = 0.021,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 21/41 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I S +IA +GL  Q   M +I+ N+AN  T G       +
Sbjct: 1  MIRSLYIAKTGLEAQQTNMDVIANNLANVSTNGFKRQRAVF 41


>gi|323175233|gb|EFZ60846.1| flagellar basal-body rod protein flgG domain protein [Escherichia
           coli LT-68]
          Length = 202

 Score = 66.8 bits (161), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 19/126 (15%), Positives = 37/126 (29%), Gaps = 3/126 (2%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
            +  I  + L++   R  ++S      +              T   +  +   G     +
Sbjct: 80  PAITIPANALSITIGRDGVVS---VTQQGQAAPVQVGQLNLTTFMNDTGLESIGENLYTE 136

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
                +                G V+  NVNV  E  +M +  R Y  N + +  +  M+
Sbjct: 137 TQSSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAYEINSKAVSTTDQML 196

Query: 126 TTTLDL 131
                L
Sbjct: 197 QKLTQL 202


>gi|86747251|ref|YP_483747.1| putative flagellar basal-body rod protein flgC [Rhodopseudomonas
           palustris HaA2]
 gi|86570279|gb|ABD04836.1| putative flagellar basal-body rod protein flgC [Rhodopseudomonas
           palustris HaA2]
          Length = 136

 Score = 66.8 bits (161), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 34/134 (25%), Positives = 55/134 (41%), Gaps = 8/134 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANART-------TGDTPGSDPYRRKTISFEEVMH 56
           + + + IA SGL   + R+++ + N+AN ++        G  P   P     +   +   
Sbjct: 1   MSSISAIAVSGLKAATRRLEVSASNVANQQSTGALPTANGAVPAGAPQAYTPLQVTQTAV 60

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
              G +   +       +   DP  P A+ SG+V  PNV++  E          Y ANL 
Sbjct: 61  PGSGTQ-TSVTPTTPGTIAIADPQAPFADESGMVAAPNVDLAQELIGQMVAKYSYTANLA 119

Query: 117 TIKQSHDMMTTTLD 130
           T+K   DM    LD
Sbjct: 120 TLKADRDMTKALLD 133


>gi|254255089|ref|ZP_04948406.1| Flagellar basal body rod protein [Burkholderia dolosa AUO158]
 gi|124899734|gb|EAY71577.1| Flagellar basal body rod protein [Burkholderia dolosa AUO158]
          Length = 261

 Score = 66.8 bits (161), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 24/134 (17%), Positives = 40/134 (29%), Gaps = 9/134 (6%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKT---ISFEEVMHGSG 59
            L+ +  I     +V       I EN   + TTG +       R           +   G
Sbjct: 134 PLVPTIDIPADATSV------TIGENGTVSVTTGSSAVPTEVGRLQLANFVNPAGLLAVG 187

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           G    + G        E           G ++  NV  + E  +M    R Y  + + + 
Sbjct: 188 GNLFVETGASGPPSEGEPGADGLGVVRQGALEGSNVQAVEEMVEMITAQRTYEMSTKVLS 247

Query: 120 QSHDMMTTTLDLLR 133
            +  MM     + R
Sbjct: 248 AADSMMQYLAQVAR 261



 Score = 41.0 bits (94), Expect = 0.056,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 29/66 (43%), Gaps = 5/66 (7%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSD-----PYRRKTISFEEVMHGS 58
          +  +  I+ +G+  Q A++Q I+ N+AN  T G            YR +     ++   +
Sbjct: 1  MNHALWISKTGIQAQDAKLQTIANNLANVNTVGFKRDRAVFEDLFYRTEQQPGAQIADNA 60

Query: 59 GGVRVK 64
           G  V+
Sbjct: 61 TGPGVQ 66


>gi|261886055|ref|ZP_06010094.1| flagellar basal body rod protein FlgG [Campylobacter fetus subsp.
           venerealis str. Azul-94]
          Length = 262

 Score = 66.8 bits (161), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 21/130 (16%), Positives = 38/130 (29%), Gaps = 3/130 (2%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           L+   +I      +       +S  +          G              +H  G    
Sbjct: 136 LLPEMNIPADATQISVGVDGTVSV-LQPGNQEMTQIGQ--IELANFINPSGLHAMGDNNF 192

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
            +     +  +             G V+  NV ++ E  D+    R Y AN + I  + +
Sbjct: 193 LETAASGAPNIGNGGTDGFGQIKQGFVEMSNVQLVEEMTDLITGQRAYEANSKAITTADE 252

Query: 124 MMTTTLDLLR 133
           M+ T   L R
Sbjct: 253 MLQTVNQLKR 262



 Score = 40.6 bits (93), Expect = 0.063,   Method: Composition-based stats.
 Identities = 14/91 (15%), Positives = 24/91 (26%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I S + A +G+  Q  ++   S NIAN  T G       +        +          
Sbjct: 1  MIRSLYTAATGMVAQQTQIDTTSHNIANVNTIGYKKNRAEFADLMYQTMQYAGTPTSTTT 60

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIVKYPN 94
                +            V       +  N
Sbjct: 61 MSPTGMEVGLGVRPTAITKVFGQGYFKETGN 91


>gi|303248239|ref|ZP_07334502.1| flagellar basal-body rod protein FlgG [Desulfovibrio fructosovorans
           JJ]
 gi|302490377|gb|EFL50288.1| flagellar basal-body rod protein FlgG [Desulfovibrio fructosovorans
           JJ]
          Length = 260

 Score = 66.8 bits (161), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 22/112 (19%), Positives = 38/112 (33%), Gaps = 2/112 (1%)

Query: 24  IISEN--IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGH 81
            I+EN  ++     GDT         T      M   G           +         +
Sbjct: 149 TITENGHLSCLDLNGDTLAETDIPLYTFINPSGMTAEGRNLYSTTQASGTANEVTPGDQN 208

Query: 82  PVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
               A G ++  NV ++ E   +    R Y AN + I  +  M+ T +++ R
Sbjct: 209 AGTLAQGYLEMSNVELVDEMVGLIVGQRAYEANSKAITTADGMLQTAVNVKR 260



 Score = 36.4 bits (82), Expect = 1.2,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 18/41 (43%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          ++ S   A +G+     ++  +S N+AN  T G       +
Sbjct: 1  MMRSLWTATTGMVAMQMQIDTMSNNLANVNTVGFKKSRAEF 41


>gi|238919261|ref|YP_002932776.1| flagellar basal body rod protein FlgG [Edwardsiella ictaluri
           93-146]
 gi|238868830|gb|ACR68541.1| flagellar basal-body rod protein FlgG, putative [Edwardsiella
           ictaluri 93-146]
          Length = 260

 Score = 66.4 bits (160), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 23/128 (17%), Positives = 40/128 (31%), Gaps = 3/128 (2%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +  +  I  +  ++   R  I+S  +   +              T   +  +   G    
Sbjct: 136 ITPAITIPANATSMTIGRDGIVSVTL---QGQAAPQQVGQLTLNTFINDAGLESMGENLY 192

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
           ++     S                G V+  NVNV  E  +M +T R Y  N + I  S  
Sbjct: 193 QETASSGSPTESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQTQRAYEINSKAISTSDQ 252

Query: 124 MMTTTLDL 131
           M+     L
Sbjct: 253 MLQRLTQL 260



 Score = 42.2 bits (97), Expect = 0.028,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 21/41 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I S +IA +GL  Q   M +I+ N+AN  T G       +
Sbjct: 1  MIRSLYIAKTGLEAQQTNMDVIANNLANVSTNGFKRQRAVF 41


>gi|134300239|ref|YP_001113735.1| hypothetical protein Dred_2400 [Desulfotomaculum reducens MI-1]
 gi|134052939|gb|ABO50910.1| protein of unknown function DUF1078 domain protein
           [Desulfotomaculum reducens MI-1]
          Length = 856

 Score = 66.4 bits (160), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 20/104 (19%), Positives = 35/104 (33%)

Query: 30  ANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGI 89
           A + T          +  T    E +  +G                + +        SG 
Sbjct: 753 AASVTPPPQDTMGVIKLVTFQNPEGLEKAGRNLFGTSVSSGEPKQGQANQSGFGTINSGY 812

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  NV++  E  +M  T R Y AN + I  S  ++   + L R
Sbjct: 813 LEMSNVDLTEEFTNMITTQRGYQANARVITVSDSLLEELIQLKR 856



 Score = 40.2 bits (92), Expect = 0.092,   Method: Composition-based stats.
 Identities = 14/82 (17%), Positives = 27/82 (32%), Gaps = 7/82 (8%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR-------RKTISFEEVMH 56
          ++ S +   SG+     RM +   NIAN  T G       ++       R   +      
Sbjct: 1  MLRSLYSGISGMRNHQTRMDVTGNNIANVNTNGYKSSRVNFQDTLSQTVRSAGNGTNPAQ 60

Query: 57 GSGGVRVKKIGVDQSTFVEEFD 78
             G+ V  +  + +    +  
Sbjct: 61 VGSGMSVGSVSNNFTQGPMQST 82


>gi|118475132|ref|YP_891713.1| flagellar basal body rod protein FlgG [Campylobacter fetus subsp.
           fetus 82-40]
 gi|118414358|gb|ABK82778.1| flagellar basal-body rod protein FlgG [Campylobacter fetus subsp.
           fetus 82-40]
          Length = 262

 Score = 66.4 bits (160), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 21/130 (16%), Positives = 38/130 (29%), Gaps = 3/130 (2%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           L+   +I      +       +S  +          G              +H  G    
Sbjct: 136 LLPEMNIPADATQISVGVDGTVSV-LQPGNQEMTQIGQ--IELANFINPSGLHAMGDNNF 192

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
            +     +  +             G V+  NV ++ E  D+    R Y AN + I  + +
Sbjct: 193 LETAASGAPNIGNGGTDGFGQIKQGFVEMSNVQLVEEMTDLITGQRAYEANSKAITTADE 252

Query: 124 MMTTTLDLLR 133
           M+ T   L R
Sbjct: 253 MLQTVNQLKR 262



 Score = 40.6 bits (93), Expect = 0.066,   Method: Composition-based stats.
 Identities = 14/91 (15%), Positives = 24/91 (26%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I S + A +G+  Q  ++   S NIAN  T G       +        +          
Sbjct: 1  MIRSLYTAATGMVAQQTQIDTTSHNIANVNTIGYKKNRAEFADLMYQTMQYAGTPTSTTT 60

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIVKYPN 94
                +            V       +  N
Sbjct: 61 MSPTGMEVGLGVRPTAITKVFGQGYFKETGN 91


>gi|289577407|ref|YP_003476034.1| flagellar basal-body rod protein FlgG [Thermoanaerobacter italicus
           Ab9]
 gi|289527120|gb|ADD01472.1| flagellar basal-body rod protein FlgG [Thermoanaerobacter italicus
           Ab9]
          Length = 266

 Score = 66.4 bits (160), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 22/112 (19%), Positives = 37/112 (33%), Gaps = 4/112 (3%)

Query: 22  MQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGH 81
           + +IS   AN    G T              + +   G    +           +   G 
Sbjct: 159 LGVISVKNAN----GTTREVATLGIYNFVNPQGLLSVGNNLYEPTEASGQPGTRDDFEGR 214

Query: 82  PVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
                 G ++  NV V+ E  DM    R Y  N + I+ + +M+    +L R
Sbjct: 215 MGKVMQGFLETSNVQVVKEMVDMIAAQRAYEINSKAIQAADEMLGIANNLRR 266



 Score = 47.2 bits (110), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 24/59 (40%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
          ++ +   A SG+  Q   + +I+ N+AN  TT        ++       +  +  GG  
Sbjct: 1  MMRALWSAASGMTAQQLNVDVIANNLANVNTTAFKRDRAEFKDLIYQTLQRENIYGGQG 59


>gi|297569153|ref|YP_003690497.1| fagellar hook-basal body protein [Desulfurivibrio alkaliphilus
           AHT2]
 gi|296925068|gb|ADH85878.1| fagellar hook-basal body protein [Desulfurivibrio alkaliphilus
           AHT2]
          Length = 806

 Score = 66.4 bits (160), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 40/111 (36%), Gaps = 4/111 (3%)

Query: 23  QIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHP 82
            II+ N +N +       +           + +H  GG   +      +    E      
Sbjct: 700 GIITGNFSNGQVLMQAKVALADFA----NLQGLHKVGGNIFRATTQSGAPVTGEPGTNGL 755

Query: 83  VANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
              A   ++  NV++  E   M  T R + AN + I  + +M+   +++ R
Sbjct: 756 GEIAPNSLEMSNVDLGTEFVKMITTQRGFQANSKMITTTDEMLNELINIKR 806


>gi|297617147|ref|YP_003702306.1| fagellar hook-basal body protein [Syntrophothermus lipocalidus DSM
           12680]
 gi|297144984|gb|ADI01741.1| fagellar hook-basal body protein [Syntrophothermus lipocalidus DSM
           12680]
          Length = 487

 Score = 66.4 bits (160), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 25/116 (21%), Positives = 39/116 (33%), Gaps = 2/116 (1%)

Query: 20  ARMQIISEN--IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEF 77
            R   I +N  I    + G T                +   GG   +         V   
Sbjct: 372 LRSITIDQNGVILGVYSNGITDNLARVALAVFQNPAGLLAKGGNLFQVSNNSGDPKVGAP 431

Query: 78  DPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
                 A   G ++  NV++  E  DM  T R + AN + I  S +M+   ++L R
Sbjct: 432 GEEAMGAILPGSLEMSNVDLSEEFTDMIVTQRGFQANSRIITTSDEMLQELVNLKR 487



 Score = 41.4 bits (95), Expect = 0.043,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 19/42 (45%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S +   SGL     RM +I  NIAN  T G       ++
Sbjct: 1  MMRSMYAGVSGLRTHQLRMDVIGNNIANVNTVGYKKSRAIFK 42


>gi|114566393|ref|YP_753547.1| flagellar hook protein [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
 gi|114337328|gb|ABI68176.1| flagellar hook protein [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
          Length = 475

 Score = 66.4 bits (160), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 20/100 (20%), Positives = 33/100 (33%)

Query: 34  TTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
             G+T                +   GG   +K        V               ++  
Sbjct: 376 DNGETRDLARVALARFQNPAGLTQLGGTMFQKSVNSGEAVVSPPTESGMGKIVPSSLEMS 435

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           NV++  E  DM  T R + AN + I  S +M+   ++L R
Sbjct: 436 NVDLSEEFTDMIVTQRGFQANSRIITTSDEMIQELVNLKR 475



 Score = 42.2 bits (97), Expect = 0.028,   Method: Composition-based stats.
 Identities = 22/91 (24%), Positives = 32/91 (35%), Gaps = 8/91 (8%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDT------PGSDPYRRKTISFEEVMHG 57
          ++ S +   SGL     RM +I  NIAN  T G          +     +  +  +    
Sbjct: 1  MMRSMYSGVSGLRNHQTRMDVIGNNIANINTAGYKKSRVVFQDTLYQTMRGATRPDSSGS 60

Query: 58 SGGVRVKKIGVDQSTFVEEFDPGHPVANASG 88
           GG     IG+  S  V   D  H  A  + 
Sbjct: 61 RGGTNPMGIGLGMS--VSSIDQIHTGAPTTA 89


>gi|254785374|ref|YP_003072803.1| flagellar basal body rod protein FlgG [Teredinibacter turnerae
           T7901]
 gi|237683455|gb|ACR10719.1| flagellar basal-body rod protein FlgG [Teredinibacter turnerae
           T7901]
          Length = 261

 Score = 66.4 bits (160), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 18/123 (14%), Positives = 37/123 (30%), Gaps = 3/123 (2%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           L  +  I ++  +V       +S  IA                        +   GG   
Sbjct: 136 LQPAITIPDNAESVTIGTDGTVSARIAGVAAPAILGNIQTVD---FVNPAGLQAIGGNLF 192

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
            +     +                G+++  NV+++ E  +M  T R Y  N + +  +  
Sbjct: 193 LETAASGNPIQGIPGQNGLGQVEQGMLENSNVDIVEEMVNMITTQRAYEMNSKIVSTADQ 252

Query: 124 MMT 126
           M+ 
Sbjct: 253 MLQ 255



 Score = 39.9 bits (91), Expect = 0.12,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 23/41 (56%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          + A+ +++ +GLA Q  ++  ++ N+ANA T G       +
Sbjct: 1  MHAALYVSKTGLAAQDTKLTTVANNLANASTVGFKRDRAVF 41


>gi|261339378|ref|ZP_05967236.1| flagellar basal-body rod protein FlgG [Enterobacter cancerogenus
           ATCC 35316]
 gi|288318179|gb|EFC57117.1| flagellar basal-body rod protein FlgG [Enterobacter cancerogenus
           ATCC 35316]
          Length = 260

 Score = 66.4 bits (160), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 19/126 (15%), Positives = 37/126 (29%), Gaps = 3/126 (2%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
            +  I  + L++   R  ++S      +              T   +  +   G     +
Sbjct: 138 PAITIPANALSITIGRDGVVS---VTQQGQAAPVQVGQLNLTTFMNDTGLESIGENLYTE 194

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
                +                G V+  NVNV  E  +M +  R Y  N + +  +  M+
Sbjct: 195 TQSSGTPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAYEINSKAVSTTDQML 254

Query: 126 TTTLDL 131
                L
Sbjct: 255 QKLTQL 260



 Score = 44.5 bits (103), Expect = 0.005,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 21/41 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I+S  IA +GL  Q   M +I+ N+AN  T G       +
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVF 41


>gi|167038473|ref|YP_001666051.1| hypothetical protein Teth39_2092 [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|320116868|ref|YP_004187027.1| flagellar basal-body rod protein FlgG [Thermoanaerobacter brockii
           subsp. finnii Ako-1]
 gi|166857307|gb|ABY95715.1| protein of unknown function DUF1078 domain protein
           [Thermoanaerobacter pseudethanolicus ATCC 33223]
 gi|319929959|gb|ADV80644.1| flagellar basal-body rod protein FlgG [Thermoanaerobacter brockii
           subsp. finnii Ako-1]
          Length = 266

 Score = 66.4 bits (160), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 33/105 (31%)

Query: 29  IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASG 88
           I+     G T              + +   G    +           +   G       G
Sbjct: 162 ISVKNPDGTTQEVATLGIYNFVNPQGLLSVGSNLYEPTEASGQPSTRDDFQGRMGKVMQG 221

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NV V+ E  DM    R Y  N + I+ + +M+    +L R
Sbjct: 222 FLETSNVQVVKEMVDMIAAQRAYEINSKAIQAADEMLGIANNLRR 266



 Score = 46.8 bits (109), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 12/90 (13%), Positives = 27/90 (30%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ +   A +G+  Q   + +I+ N+AN  TT        ++       +  +  GG   
Sbjct: 1  MMRALWSAATGMTAQQLNVDVIANNLANVNTTAFKRDRAEFKDLIYQTLQRENVYGGQGK 60

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
                                +    + P
Sbjct: 61 PVNMQVGVGVRPSAIVKDFTEGSLQQTENP 90


>gi|296102906|ref|YP_003613052.1| flagellar basal body rod protein FlgG [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
 gi|295057365|gb|ADF62103.1| flagellar basal body rod protein FlgG [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
          Length = 260

 Score = 66.4 bits (160), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 19/126 (15%), Positives = 37/126 (29%), Gaps = 3/126 (2%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
            +  I  + L++   R  ++S      +              T   +  +   G     +
Sbjct: 138 PAITIPANALSITIGRDGVVS---VTQQGQAAPVQVGQLNLTTFMNDTGLESIGENLYTE 194

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
                +                G V+  NVNV  E  +M +  R Y  N + +  +  M+
Sbjct: 195 TQSSGTPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAYEINSKAVSTTDQML 254

Query: 126 TTTLDL 131
                L
Sbjct: 255 QKLTQL 260



 Score = 44.5 bits (103), Expect = 0.005,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 21/41 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I+S  IA +GL  Q   M +I+ N+AN  T G       +
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVF 41


>gi|152990359|ref|YP_001356081.1| flagellar basal-body rod protein FlgG [Nitratiruptor sp. SB155-2]
 gi|151422220|dbj|BAF69724.1| flagellar basal-body rod protein FlgG [Nitratiruptor sp. SB155-2]
          Length = 266

 Score = 66.4 bits (160), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 15/85 (17%), Positives = 29/85 (34%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                  +   GG    +          + D       + G ++  NVN++ E  ++   
Sbjct: 181 RFINPAGLKAIGGNLFVQSEASAEPIEGDPDTNGFGKLSQGFLEMSNVNIVEEMVNLIVA 240

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLL 132
            R Y  N + I  + +M+ T   L 
Sbjct: 241 QRAYEMNSKGITTADEMLRTVATLK 265



 Score = 47.2 bits (110), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 13/61 (21%), Positives = 23/61 (37%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I +   + SG+  Q   + ++S NIAN  TTG       +        +      G   
Sbjct: 1  MIRALWTSASGMQAQQTNLDVVSNNIANVNTTGFKQSRANFEDLIYQNIKDPGVENGNGN 60

Query: 64 K 64
          +
Sbjct: 61 R 61


>gi|218886418|ref|YP_002435739.1| hypothetical protein DvMF_1322 [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|218757372|gb|ACL08271.1| protein of unknown function DUF1078 domain protein [Desulfovibrio
           vulgaris str. 'Miyazaki F']
          Length = 136

 Score = 66.1 bits (159), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 23/133 (17%), Positives = 41/133 (30%), Gaps = 6/133 (4%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +I       S L      M + + N+AN  T          +    S +       GV+V
Sbjct: 1   MIDGFGTPLSALDAFGTSMAVTANNVANMNTDEFRASDVRLQTGPASQDGQDGQERGVQV 60

Query: 64  KKIGVDQST------FVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
            +I    +                 V   +  ++  N +V  E   M    R + AN   
Sbjct: 61  AEIRQSTTEGPLRMDLRRVVHADGSVTVETSAIEGSNTDVANEMVSMLTDQRAFEANAAV 120

Query: 118 IKQSHDMMTTTLD 130
           ++   +M    +D
Sbjct: 121 VRARDEMTGILVD 133


>gi|297543694|ref|YP_003675996.1| flagellar basal-body rod protein FlgG [Thermoanaerobacter mathranii
           subsp. mathranii str. A3]
 gi|296841469|gb|ADH59985.1| flagellar basal-body rod protein FlgG [Thermoanaerobacter mathranii
           subsp. mathranii str. A3]
          Length = 266

 Score = 66.1 bits (159), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 33/105 (31%)

Query: 29  IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASG 88
           I+     G T              + +   G    +           +   G       G
Sbjct: 162 ISVKNPDGTTQEVATLGIYNFVNPQGLLSVGNNLYEPTEASGQPGTRDDFEGRMGKVMQG 221

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NV V+ E  DM    R Y  N + I+ + +M+    +L R
Sbjct: 222 FLETSNVQVVKEMVDMIAAQRAYEINSKAIQAADEMLGIANNLRR 266



 Score = 47.2 bits (110), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 24/59 (40%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
          ++ +   A SG+  Q   + +I+ N+AN  TT        ++       +  +  GG  
Sbjct: 1  MMRALWSAASGMTAQQLNVDVIANNLANVNTTAFKRDRAEFKDLIYQTLQRENIYGGQG 59


>gi|156934438|ref|YP_001438354.1| flagellar basal body rod protein FlgG [Cronobacter sakazakii ATCC
           BAA-894]
 gi|156532692|gb|ABU77518.1| hypothetical protein ESA_02269 [Cronobacter sakazakii ATCC BAA-894]
          Length = 260

 Score = 66.1 bits (159), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 20/126 (15%), Positives = 38/126 (30%), Gaps = 3/126 (2%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
            +  I  + L++   R  ++S      + T            T   +  +   G     +
Sbjct: 138 PAITIPANALSITVGRDGVVS---VTQQGTAAPVQVGQINLTTFMNDSGLESIGENLYTE 194

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
                +                G V+  NVNV  E  +M +  R Y  N + +  +  M+
Sbjct: 195 TQSSGTPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAYEINSKAVSTTDQML 254

Query: 126 TTTLDL 131
                L
Sbjct: 255 QKLTQL 260



 Score = 44.5 bits (103), Expect = 0.004,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 21/41 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I+S  IA +GL  Q   M +I+ N+AN  T G       +
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVF 41


>gi|217076897|ref|YP_002334613.1| flagellar basal-body rod protein FlgG [Thermosipho africanus
           TCF52B]
 gi|217036750|gb|ACJ75272.1| flagellar basal-body rod protein FlgG [Thermosipho africanus
           TCF52B]
          Length = 261

 Score = 66.1 bits (159), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 16/86 (18%), Positives = 30/86 (34%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                  +   G     +     +            +   G V+  NV+++ E  DM   
Sbjct: 176 RFINPSGLKAIGDNLFLETPASGTPVEGTAGQDGFGSILQGYVEKSNVDIVKEMVDMISA 235

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y  N +TI+ + +M+ T   + R
Sbjct: 236 MRAYELNSRTIQTADEMLRTASSMKR 261



 Score = 41.4 bits (95), Expect = 0.043,   Method: Composition-based stats.
 Identities = 11/35 (31%), Positives = 18/35 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDT 38
          +I   + A +G+  Q  ++  +S NIAN  T G  
Sbjct: 1  MINGLYTAATGMWAQQFKLDTLSNNIANVDTAGYK 35


>gi|260597447|ref|YP_003210018.1| flagellar basal body rod protein FlgG [Cronobacter turicensis
           z3032]
 gi|260216624|emb|CBA29921.1| Flagellar basal-body rod protein flgG [Cronobacter turicensis
           z3032]
          Length = 260

 Score = 66.1 bits (159), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 20/126 (15%), Positives = 38/126 (30%), Gaps = 3/126 (2%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
            +  I  + L++   R  ++S      + T            T   +  +   G     +
Sbjct: 138 PAITIPANALSITVGRDGVVS---VTQQGTAAPVQVGQINLTTFMNDSGLESIGENLYTE 194

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
                +                G V+  NVNV  E  +M +  R Y  N + +  +  M+
Sbjct: 195 TQSSGTPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAYEINSKAVSTTDQML 254

Query: 126 TTTLDL 131
                L
Sbjct: 255 QKLTQL 260



 Score = 44.5 bits (103), Expect = 0.005,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 21/41 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I+S  IA +GL  Q   M +I+ N+AN  T G       +
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVF 41


>gi|218887604|ref|YP_002436925.1| flagellar basal body rod protein FlgG [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|218758558|gb|ACL09457.1| flagellar basal-body rod protein FlgG [Desulfovibrio vulgaris str.
           'Miyazaki F']
          Length = 260

 Score = 66.1 bits (159), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 22/112 (19%), Positives = 35/112 (31%), Gaps = 2/112 (1%)

Query: 24  IISEN--IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGH 81
            ++EN  I+   + G           T      +   G                      
Sbjct: 149 TVTENGHISALDSNGAALAEADIPLYTFINPAGLEARGRNLYVPSEASGEAVEGVPGENQ 208

Query: 82  PVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
               A G ++  NV V+ E  +M    R Y  N + I+ S  M+ T + L R
Sbjct: 209 VGTIAQGFLEMSNVEVVDEMVNMIVGQRAYEMNSKAIQTSDTMLQTAVQLKR 260



 Score = 42.9 bits (99), Expect = 0.013,   Method: Composition-based stats.
 Identities = 14/91 (15%), Positives = 25/91 (27%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ S   A +G+  Q   + +IS N+AN  TT        +         +   +     
Sbjct: 1  MMRSLWTAATGMVAQQLNIDVISNNLANVNTTSFKKSRAEFEDLMYQNMRIAGAATEGDN 60

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIVKYPN 94
          +     Q          H            N
Sbjct: 61 RIPTGIQVGMGVRPTTVHKFFTQGDYSNTGN 91


>gi|20806699|ref|NP_621870.1| flagellar basal body and hook proteins [Thermoanaerobacter
           tengcongensis MB4]
 gi|20515153|gb|AAM23474.1| Flagellar basal body and hook proteins [Thermoanaerobacter
           tengcongensis MB4]
          Length = 266

 Score = 66.1 bits (159), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 33/105 (31%)

Query: 29  IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASG 88
           I      G T           +  + +   G    +           +   G       G
Sbjct: 162 IQVKNPDGTTQEVATLGIYNFTNPQGLLSVGNNLYEATEASGQPGTRDDFEGRMGKVMQG 221

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NV V+ E  DM    R Y  N + I+ + +M+    +L R
Sbjct: 222 FLETSNVQVVKEMVDMIAAQRAYEINSKAIQAADEMLGIANNLRR 266



 Score = 46.8 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 11/59 (18%), Positives = 24/59 (40%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
          ++ +   A +G+  Q   + +I+ N+AN  TT        ++       +  +  GG  
Sbjct: 1  MMRALWSAATGMTAQQLNVDVIANNLANVNTTAFKRDRAEFKDLIYQTLQRENVYGGQG 59


>gi|218778846|ref|YP_002430164.1| flagellar basal body rod protein FlgG [Desulfatibacillum
           alkenivorans AK-01]
 gi|218760230|gb|ACL02696.1| Flagellar basal-body rod protein FlgG [Desulfatibacillum
           alkenivorans AK-01]
          Length = 260

 Score = 66.1 bits (159), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 19/102 (18%), Positives = 32/102 (31%), Gaps = 3/102 (2%)

Query: 32  ARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVK 91
           A     T     Y     +    ++  G    K                     + G ++
Sbjct: 162 ANEEVATYDITLYD---FANPAGLYSMGRNLYKTTEASGEEVEGTPGDEGFGTISQGFLE 218

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             NVNV+ E   M    R Y AN + I+ +  M+    ++ R
Sbjct: 219 MSNVNVVEEMVTMIIAQRAYEANSKAIQTADSMLQIANNVKR 260



 Score = 41.8 bits (96), Expect = 0.029,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 19/42 (45%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++     A +G+  Q   + ++S N+AN  TT        ++
Sbjct: 1  MLRGLWTAATGMEAQQLNIDVVSNNLANINTTAFKRSRPDFQ 42


>gi|294635612|ref|ZP_06714089.1| flagellar basal-body rod protein FlgG [Edwardsiella tarda ATCC
           23685]
 gi|291091064|gb|EFE23625.1| flagellar basal-body rod protein FlgG [Edwardsiella tarda ATCC
           23685]
          Length = 260

 Score = 66.1 bits (159), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 22/127 (17%), Positives = 39/127 (30%), Gaps = 3/127 (2%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
             +  I  +  ++   R  I+S  +   +              T   +  +   G    +
Sbjct: 137 SPAITIPANATSMTIGRDGIVSVTV---QGQAAAQQVGQLTLSTFINDAGLESVGENLYQ 193

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           +     +                G V+  NVNV  E  +M +T R Y  N + I  S  M
Sbjct: 194 ETDSSGAPTESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQTQRAYEINSKAISTSDQM 253

Query: 125 MTTTLDL 131
           +     L
Sbjct: 254 LQRLTQL 260



 Score = 42.2 bits (97), Expect = 0.022,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 21/41 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I S +IA +GL  Q   M +I+ N+AN  T G       +
Sbjct: 1  MIRSLYIAKTGLEAQQTNMDVIANNLANVSTNGFKRQRAVF 41


>gi|254478074|ref|ZP_05091457.1| conserved domain protein [Carboxydibrachium pacificum DSM 12653]
 gi|214035936|gb|EEB76627.1| conserved domain protein [Carboxydibrachium pacificum DSM 12653]
          Length = 266

 Score = 66.1 bits (159), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 33/105 (31%)

Query: 29  IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASG 88
           I      G T           +  + +   G    +           +   G       G
Sbjct: 162 IQVKNPDGTTQEVATLGIYNFTNPQGLLSVGNNLYEATEASGQPGTRDDFEGRMGKVMQG 221

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NV V+ E  DM    R Y  N + I+ + +M+    +L R
Sbjct: 222 FLETSNVQVVKEMVDMIAAQRAYEINSKAIQAADEMLGIANNLRR 266



 Score = 46.8 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 11/59 (18%), Positives = 24/59 (40%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
          ++ +   A +G+  Q   + +I+ N+AN  TT        ++       +  +  GG  
Sbjct: 1  MMRALWSAATGMTAQQLNVDVIANNLANVNTTAFKRDRAEFKDLIYQTLQRENVYGGQG 59


>gi|293414371|ref|ZP_06657020.1| flagellar basal-body rod protein FlgG [Escherichia coli B185]
 gi|291434429|gb|EFF07402.1| flagellar basal-body rod protein FlgG [Escherichia coli B185]
          Length = 260

 Score = 66.1 bits (159), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 19/126 (15%), Positives = 37/126 (29%), Gaps = 3/126 (2%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
            +  I  + L++   R  ++S      +              T   +  +   G     +
Sbjct: 138 PAITIPANALSITIGRDGVVS---VTQQGQAAPVQVGQLNLTTFMNDTGLESIGENLYTE 194

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
                +                G V+  NVNV  E  +M +  R Y  N + +  +  M+
Sbjct: 195 TQSSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAYEINSKAVSTTDQML 254

Query: 126 TTTLDL 131
                L
Sbjct: 255 QKLTQL 260



 Score = 42.6 bits (98), Expect = 0.020,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 20/41 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I+   IA +GL  Q   M +I+ N+AN  T G       +
Sbjct: 1  MISLLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVF 41


>gi|218689031|ref|YP_002397243.1| flagellar basal body rod protein FlgG [Escherichia coli ED1a]
 gi|218426595|emb|CAR07423.1| flagellar component of cell-distal portion of basal-body rod
           [Escherichia coli ED1a]
          Length = 260

 Score = 66.1 bits (159), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 19/126 (15%), Positives = 37/126 (29%), Gaps = 3/126 (2%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
            +  I  + L++   R  ++S      +              T   +  +   G     +
Sbjct: 138 PAITIPANALSITIGRDGVVS---VTQQGQAAPVQVGQLNLTTFMNDTGLESIGENLYTE 194

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
                +                G V+  NVNV  E  +M +  R Y  N + +  +  M+
Sbjct: 195 TQSSGAPNESTPGLNGAGLLYQGYVEMSNVNVAEELVNMIQVQRAYEINSKAVSTTDQML 254

Query: 126 TTTLDL 131
                L
Sbjct: 255 QKLTQL 260



 Score = 44.1 bits (102), Expect = 0.007,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 21/41 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I+S  IA +GL  Q   M +I+ N+AN  T G       +
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVF 41


>gi|320173530|gb|EFW48726.1| Flagellar basal-body rod protein FlgG [Shigella dysenteriae CDC
           74-1112]
          Length = 260

 Score = 66.1 bits (159), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 19/126 (15%), Positives = 37/126 (29%), Gaps = 3/126 (2%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
            +  I  + L++   R  ++S      +              T   +  +   G     +
Sbjct: 138 PAITIPANALSITIGRDGVVS---VTQQGQAAPVQVGQLNLTTFMNDTGLESIGENLYTE 194

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
                +                G V+  NVNV  E  +M +  R Y  N + +  +  M+
Sbjct: 195 TQSSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAYEINSKAVSTTDQML 254

Query: 126 TTTLDL 131
                L
Sbjct: 255 QKLTQL 260



 Score = 44.1 bits (102), Expect = 0.006,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 21/41 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I+S  IA +GL  Q   M +I+ N+AN  T G       +
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVF 41


>gi|238755322|ref|ZP_04616665.1| Flagellar basal-body rod protein flgG [Yersinia ruckeri ATCC 29473]
 gi|238706458|gb|EEP98832.1| Flagellar basal-body rod protein flgG [Yersinia ruckeri ATCC 29473]
          Length = 260

 Score = 66.1 bits (159), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 22/126 (17%), Positives = 39/126 (30%), Gaps = 3/126 (2%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
            +  I  + L++   R  I+S      +              T   +  +   G    ++
Sbjct: 138 PAITIPANALSITVGRDGIVS---VTQQGQTAAQQVGQLTLTTFINDSGLESVGENLYQE 194

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
                +                G V+  NVNV  E  +M +T R Y  N + +  S  M+
Sbjct: 195 TASSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQTQRAYEINSKAVTTSDQML 254

Query: 126 TTTLDL 131
                L
Sbjct: 255 QKLTQL 260



 Score = 44.1 bits (102), Expect = 0.006,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 21/61 (34%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I S  IA +GL  Q   M +I+ N+AN  T G       +                 + 
Sbjct: 1  MIRSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTMRQPGAQSSEQT 60

Query: 64 K 64
           
Sbjct: 61 T 61


>gi|138894748|ref|YP_001125201.1| flagellar basal body rod protein FlgG [Geobacillus
           thermodenitrificans NG80-2]
 gi|134266261|gb|ABO66456.1| Flagellar hook protein [Geobacillus thermodenitrificans NG80-2]
          Length = 264

 Score = 66.1 bits (159), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 20/133 (15%), Positives = 43/133 (32%), Gaps = 13/133 (9%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           +D    S  I   G             N+     TG+       +    +  + +   G 
Sbjct: 145 IDPNAKSLSIGADG-------------NVTIVDDTGNLQLVGTIQLAKFANPDGLEKEGN 191

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
              ++        +            SG ++  NV++  E  +M    R + AN + I  
Sbjct: 192 NLFRETVNSGDPQIGVPGANGTGKLVSGALEMSNVDLAEEFTEMIVAQRGFQANTRIITT 251

Query: 121 SHDMMTTTLDLLR 133
           S +++   ++L +
Sbjct: 252 SDEILQELVNLKK 264



 Score = 34.1 bits (76), Expect = 7.1,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 18/42 (42%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S +     +     ++ +I  NIAN  T G   G   ++
Sbjct: 1  MLRSMYSGIGAMRNFQTKLDVIGNNIANVNTYGFKKGRTIFQ 42


>gi|332342624|gb|AEE55958.1| flagellar basal-body rod protein FlgG [Escherichia coli UMNK88]
          Length = 260

 Score = 65.7 bits (158), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 19/126 (15%), Positives = 37/126 (29%), Gaps = 3/126 (2%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
            +  I  + L++   R  ++S      +              T   +  +   G     +
Sbjct: 138 PAITIPANALSITIGRDGVVS---VTQQGQAAPVQVGQLNLTTFMNDTGLESIGENLYTE 194

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
                +                G V+  NVNV  E  +M +  R Y  N + +  +  M+
Sbjct: 195 TQSSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAYEINSKAVSTTDQML 254

Query: 126 TTTLDL 131
                L
Sbjct: 255 QKLTQL 260



 Score = 44.1 bits (102), Expect = 0.006,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 21/41 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I+S  IA +GL  Q   M +I+ N+AN  T G       +
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVF 41


>gi|268317781|ref|YP_003291500.1| flagellar basal-body rod protein FlgG [Rhodothermus marinus DSM
           4252]
 gi|262335315|gb|ACY49112.1| flagellar basal-body rod protein FlgG [Rhodothermus marinus DSM
           4252]
          Length = 262

 Score = 65.7 bits (158), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 13/86 (15%), Positives = 29/86 (33%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                  +   GG   ++        +             G ++  NV+V+ E  ++   
Sbjct: 177 RFPNPAGLRAIGGNLYEQTEASGFPILGAPGEEGFGTVKQGFLEAANVDVVQEMVNLITA 236

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y  N + +  + +M+ T   + R
Sbjct: 237 QRAYEINSKMVTTTEEMLQTASQMKR 262



 Score = 42.2 bits (97), Expect = 0.024,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 20/42 (47%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ +   A  G+  Q   +  I+ N+ANA TTG       ++
Sbjct: 1  MLRALRTAALGMNAQQTNVDNIAHNLANANTTGFKNARVVFQ 42


>gi|225158946|ref|ZP_03725258.1| flagellar basal-body rod protein FlgG [Opitutaceae bacterium TAV2]
 gi|224802441|gb|EEG20701.1| flagellar basal-body rod protein FlgG [Opitutaceae bacterium TAV2]
          Length = 260

 Score = 65.7 bits (158), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 13/87 (14%), Positives = 30/87 (34%)

Query: 47  KTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
              +    +   GG   ++     +    +             ++  NVN++ E  ++  
Sbjct: 174 TRFANPAGLRSLGGNLYEETPASGTPETGQPGEQGFGTTQQYYIESSNVNIVEEMVNLIV 233

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
             R Y  + + I+ S +M+     L R
Sbjct: 234 AQRAYEVSSKAIQTSDEMLQNVTQLKR 260



 Score = 40.2 bits (92), Expect = 0.097,   Method: Composition-based stats.
 Identities = 11/60 (18%), Positives = 19/60 (31%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +  S + A +G+  Q   +  I+ N+AN  T G       +               G   
Sbjct: 1  MNLSLYSAATGMEAQQLNLNTIANNLANVNTAGFKRSKIEFHDMLYQSPRNAGAETGNGN 60


>gi|297538898|ref|YP_003674667.1| flagellar basal-body rod protein FlgG [Methylotenera sp. 301]
 gi|297258245|gb|ADI30090.1| flagellar basal-body rod protein FlgG [Methylotenera sp. 301]
          Length = 260

 Score = 65.7 bits (158), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 22/129 (17%), Positives = 40/129 (31%), Gaps = 3/129 (2%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            +  +  +  +  +    R   +S        +  T      +  T      + G G   
Sbjct: 135 PVQPAITVPANAESFTVGRDGTVS---ITTTGSTATTQIGTLQLATFINTAGLQGKGENL 191

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
             +     +  V             G V+  NVNV+ E  +M +T R Y  N + I  S 
Sbjct: 192 FVETTASGNPTVNNPGTNGAGLLTQGYVETSNVNVVEELVNMIQTQRAYEINSKAITTSD 251

Query: 123 DMMTTTLDL 131
            M+     +
Sbjct: 252 QMLQKLTQM 260



 Score = 42.9 bits (99), Expect = 0.013,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 21/41 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I S  I+ +GL  Q  +M +I+ N+AN  T G       +
Sbjct: 1  MIRSLWISKTGLDAQQTQMDVIANNLANVSTNGFKRSRAVF 41


>gi|188997557|ref|YP_001931808.1| flagellar basal-body rod protein FlgG [Sulfurihydrogenibium sp.
           YO3AOP1]
 gi|188932624|gb|ACD67254.1| flagellar basal-body rod protein FlgG [Sulfurihydrogenibium sp.
           YO3AOP1]
          Length = 266

 Score = 65.7 bits (158), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 17/104 (16%), Positives = 34/104 (32%), Gaps = 1/104 (0%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           N+     T      +         +   GG   K           + +         G +
Sbjct: 164 NSGGQQTTEEVGNIKLYKFINPAGLKAIGGNLFKYTEASGQPIEGDPNTDAFGKLTQGFL 223

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
           +  NVN++ E  ++    R Y  N + I  + +M+  T+  L+ 
Sbjct: 224 EMSNVNIVEEMVNLIVAQRAYEVNSKGIITADEML-KTVSTLKS 266



 Score = 45.2 bits (105), Expect = 0.003,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 19/41 (46%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          ++ +   + SG+  Q   + +IS NIAN  T G       +
Sbjct: 1  MLRALWTSASGMEAQQTNLDVISHNIANVNTVGFKRSRANF 41


>gi|323697472|ref|ZP_08109384.1| flagellar basal-body rod protein FlgG [Desulfovibrio sp. ND132]
 gi|323457404|gb|EGB13269.1| flagellar basal-body rod protein FlgG [Desulfovibrio desulfuricans
           ND132]
          Length = 260

 Score = 65.7 bits (158), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 22/129 (17%), Positives = 42/129 (32%), Gaps = 13/129 (10%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
            +S  I+ +G      +   +   +A A        +      T         + GV V 
Sbjct: 145 TSSISISETGTISALDKDGTV---LATADIDLYRFQNPAGLIATGRNFYRESDASGVAVA 201

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
               D           +    A G ++  NV ++ E   +    R +  N + I  S  M
Sbjct: 202 GTPGDD----------NYGTIAQGFLEGSNVEMVDEMVGLIVGQRAFEINSKAITTSDGM 251

Query: 125 MTTTLDLLR 133
           + T +++ R
Sbjct: 252 LQTAINIKR 260



 Score = 39.5 bits (90), Expect = 0.14,   Method: Composition-based stats.
 Identities = 12/91 (13%), Positives = 25/91 (27%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ S   + +G+     ++  +S N+AN  TT        +        ++  G      
Sbjct: 1  MMRSLWTSATGMIAMQTQIDTLSNNLANVSTTAFKKSRAEFEDLMYQTLKIAGGENADGT 60

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIVKYPN 94
          +     Q          H            N
Sbjct: 61 QTPVGMQIGMGVRPVSVHKFFTQGDFQNTGN 91


>gi|195940720|ref|ZP_03086102.1| flagellar basal body rod protein FlgG [Escherichia coli O157:H7
           str. EC4024]
 gi|295096223|emb|CBK85313.1| flagellar basal-body rod protein FlgG, Gram-negative bacteria
           [Enterobacter cloacae subsp. cloacae NCTC 9394]
          Length = 260

 Score = 65.7 bits (158), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 20/126 (15%), Positives = 37/126 (29%), Gaps = 3/126 (2%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
            +  I  + L++   R  I+S      +              T   +  +   G     +
Sbjct: 138 PAITIPANALSITIGRDGIVS---VTQQGQAAPVQVGQLNLTTFMNDTGLESIGENLYTE 194

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
                +                G V+  NVNV  E  +M +  R Y  N + +  +  M+
Sbjct: 195 TQSSGTPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAYEINSKAVSTTDQML 254

Query: 126 TTTLDL 131
                L
Sbjct: 255 QKLTQL 260



 Score = 44.5 bits (103), Expect = 0.005,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 21/41 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I+S  IA +GL  Q   M +I+ N+AN  T G       +
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVF 41


>gi|24112486|ref|NP_706996.1| flagellar basal body rod protein FlgG [Shigella flexneri 2a str.
           301]
 gi|30062614|ref|NP_836785.1| flagellar basal body rod protein FlgG [Shigella flexneri 2a str.
           2457T]
 gi|24051372|gb|AAN42703.1| flagellar basal body rod protein flgG [Shigella flexneri 2a str.
           301]
 gi|30040860|gb|AAP16591.1| flagellar basal body rod protein flgG [Shigella flexneri 2a str.
           2457T]
 gi|281600496|gb|ADA73480.1| Flagellar basal body rod protein flgG [Shigella flexneri 2002017]
 gi|313650470|gb|EFS14877.1| flagellar basal-body rod protein FlgG [Shigella flexneri 2a str.
           2457T]
 gi|332758238|gb|EGJ88561.1| flagellar basal-body rod protein FlgG [Shigella flexneri 4343-70]
 gi|332759659|gb|EGJ89964.1| flagellar basal-body rod protein FlgG [Shigella flexneri 2747-71]
 gi|332761424|gb|EGJ91708.1| flagellar basal-body rod protein FlgG [Shigella flexneri K-671]
 gi|332767686|gb|EGJ97879.1| flagellar basal-body rod protein FlgG [Shigella flexneri 2930-71]
 gi|333005399|gb|EGK24917.1| flagellar basal-body rod protein FlgG [Shigella flexneri K-218]
 gi|333019426|gb|EGK38709.1| flagellar basal-body rod protein FlgG [Shigella flexneri K-304]
          Length = 260

 Score = 65.7 bits (158), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 19/126 (15%), Positives = 37/126 (29%), Gaps = 3/126 (2%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
            +  I  + L++   R  ++S      +              T   +  +   G     +
Sbjct: 138 PAITIPANALSITIGRDGVVS---VTQQGQAAPVQVGQLNLTTFMNDTGLESIGENLYTE 194

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
                +                G V+  NVNV  E  +M +  R Y  N + +  +  M+
Sbjct: 195 TQSSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAYEINSKAVSTTDQML 254

Query: 126 TTTLDL 131
                L
Sbjct: 255 QKLTQL 260



 Score = 44.1 bits (102), Expect = 0.006,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 21/41 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I+S  IA +GL  Q   M +I+ N+AN  T G       +
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVF 41


>gi|204930805|ref|ZP_03221678.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
 gi|204320264|gb|EDZ05468.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
          Length = 260

 Score = 65.7 bits (158), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 19/126 (15%), Positives = 37/126 (29%), Gaps = 3/126 (2%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
            +  I  + L++   R  ++S      +              T   +  +   G     +
Sbjct: 138 PAITIPANALSITIGRDGVVS---VTQQGQAAPVQVGQLNLTTFMNDTGLESIGENLYIE 194

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
                +                G V+  NVNV  E  +M +  R Y  N + +  +  M+
Sbjct: 195 TQSSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAYEINSKAVSTTDQML 254

Query: 126 TTTLDL 131
                L
Sbjct: 255 QKLTQL 260



 Score = 44.5 bits (103), Expect = 0.005,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 21/41 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I+S  IA +GL  Q   M +I+ N+AN  T G       +
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVF 41


>gi|218549194|ref|YP_002382985.1| flagellar basal body rod protein FlgG [Escherichia fergusonii ATCC
           35469]
 gi|218356735|emb|CAQ89363.1| flagellar component of cell-distal portion of basal-body rod
           [Escherichia fergusonii ATCC 35469]
 gi|324113873|gb|EGC07847.1| flagellar basal-body rod protein FlgG [Escherichia fergusonii B253]
 gi|325497614|gb|EGC95473.1| flagellar basal body rod protein FlgG [Escherichia fergusonii
           ECD227]
          Length = 260

 Score = 65.7 bits (158), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 19/126 (15%), Positives = 37/126 (29%), Gaps = 3/126 (2%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
            +  I  + L++   R  ++S      +              T   +  +   G     +
Sbjct: 138 PAITIPANALSITIGRDGVVS---VTQQGQAAPVQVGQLNLTTFMNDTGLESIGENLYVE 194

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
                +                G V+  NVNV  E  +M +  R Y  N + +  +  M+
Sbjct: 195 TQSSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAYEINSKAVSTTDQML 254

Query: 126 TTTLDL 131
                L
Sbjct: 255 QKLTQL 260



 Score = 44.1 bits (102), Expect = 0.006,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 21/41 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I+S  IA +GL  Q   M +I+ N+AN  T G       +
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVF 41


>gi|297616912|ref|YP_003702071.1| flagellar basal-body rod protein FlgG [Syntrophothermus lipocalidus
           DSM 12680]
 gi|297144749|gb|ADI01506.1| flagellar basal-body rod protein FlgG [Syntrophothermus lipocalidus
           DSM 12680]
          Length = 261

 Score = 65.7 bits (158), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 13/86 (15%), Positives = 33/86 (38%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
             +    +   GG   +           + +    V+  +G ++  N+ ++ E  ++   
Sbjct: 176 KFTNPAGLEKIGGNLYRPTASSGEAIDWDPEADTTVSLHAGYLEAANIQIVEEMVNLITA 235

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y  N + I+ + +M+    +L R
Sbjct: 236 QRAYEINSKVIQSADEMLGMAANLRR 261



 Score = 40.2 bits (92), Expect = 0.089,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 22/42 (52%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ + + +++G+  Q   +  I+ NIAN  TTG       ++
Sbjct: 1  MLRALYTSSTGMFAQQLNIDNIAHNIANVNTTGYKKSRVEFQ 42


>gi|283850807|ref|ZP_06368093.1| flagellar basal-body rod protein FlgG [Desulfovibrio sp. FW1012B]
 gi|283573730|gb|EFC21704.1| flagellar basal-body rod protein FlgG [Desulfovibrio sp. FW1012B]
          Length = 260

 Score = 65.7 bits (158), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 21/133 (15%), Positives = 40/133 (30%), Gaps = 8/133 (6%)

Query: 3   YLIASAHIANSGLAVQSARMQIISEN--IANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
            L  +  +          +   I+EN  ++     G   G       T      +   G 
Sbjct: 134 PLQPAFSVPA------GTKSITITENGHLSCLDQNGAAQGETDIPLYTFINSPGLTAEGR 187

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
                               +    A G ++  NV ++ E   +    R Y AN + I  
Sbjct: 188 NLYSTTQASGDAQEVTPGDQNAGTLAQGFLEMSNVELVDEMVGLIVGQRAYEANSKAITT 247

Query: 121 SHDMMTTTLDLLR 133
           +  M+ T +++ R
Sbjct: 248 ADGMLQTAVNVKR 260



 Score = 36.4 bits (82), Expect = 1.2,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 18/41 (43%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          ++ S   A +G+     ++  +S N+AN  T G       +
Sbjct: 1  MMRSLWTATTGMVAMQMQIDTMSNNLANVNTVGFKKSRAEF 41


>gi|270262399|ref|ZP_06190670.1| flagellar basal-body rod protein FlgG [Serratia odorifera 4Rx13]
 gi|270043083|gb|EFA16176.1| flagellar basal-body rod protein FlgG [Serratia odorifera 4Rx13]
          Length = 260

 Score = 65.7 bits (158), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 22/126 (17%), Positives = 39/126 (30%), Gaps = 3/126 (2%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
            +  I  + L++   R  I+S      +              T   +  +   G    ++
Sbjct: 138 PAITIPANALSITVGRDGIVS---VTQQGQTAAQQVGQLTLTTFINDSGLESVGENLYQE 194

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
                +                G V+  NVNV  E  +M +T R Y  N + +  S  M+
Sbjct: 195 TESSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQTQRAYEINSKAVSTSDQML 254

Query: 126 TTTLDL 131
                L
Sbjct: 255 QKLTQL 260



 Score = 44.5 bits (103), Expect = 0.006,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 21/61 (34%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I S  IA +GL  Q   M +I+ N+AN  T G       +                 + 
Sbjct: 1  MIPSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTMRQPGAQSSEQT 60

Query: 64 K 64
           
Sbjct: 61 T 61


>gi|239817163|ref|YP_002946073.1| flagellar basal-body rod protein FlgG [Variovorax paradoxus S110]
 gi|239803740|gb|ACS20807.1| flagellar basal-body rod protein FlgG [Variovorax paradoxus S110]
          Length = 260

 Score = 65.7 bits (158), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 21/129 (16%), Positives = 41/129 (31%), Gaps = 3/129 (2%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            +  +  +  +  ++   R  I+S          +T      +  T      +   G   
Sbjct: 135 PVQPAITLPANATSLTIGRDGIVS---ITQAGQTNTVQVGQLQLATFLNPAGLQSKGENL 191

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
             +     +              + G V+  NVNV+ E  +M  T R Y  N + ++ S 
Sbjct: 192 YAETDASGAPNQVNPGIDGAGILSQGYVEASNVNVVEELVNMIATQRAYEINSKAVQTSD 251

Query: 123 DMMTTTLDL 131
            M+     L
Sbjct: 252 QMLQRLAQL 260



 Score = 41.8 bits (96), Expect = 0.030,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 23/41 (56%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          ++ S +IA +GL  Q  ++ ++S N+AN  TTG       +
Sbjct: 1  MMRSLYIAKTGLDAQQTQLDVVSNNLANVGTTGFKRSRAVF 41


>gi|188592119|ref|YP_001796717.1| flagellar basal body rod protein flgg [Cupriavidus taiwanensis LMG
           19424]
 gi|170938493|emb|CAP63480.1| FlgG: Flagellar basal-body rod protein [Cupriavidus taiwanensis LMG
           19424]
          Length = 261

 Score = 65.7 bits (158), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/131 (19%), Positives = 43/131 (32%), Gaps = 7/131 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +  +  I  + L++   R   +S         G +      + +  +F            
Sbjct: 136 IQPAITIPANTLSMTIGRDGTVS-----VTQPGSSANVQVGQLQLATFMNPAGLESMGEN 190

Query: 64  KKIGVDQSTFVEEFDPGHPVAN--ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
             +  D S       PG   A       V+  NVNV+ E   M +T R Y  N + ++ S
Sbjct: 191 LYVQTDASGAPNTTVPGLNGAGVVQQNYVEASNVNVVEELVSMIQTQRAYEINSKAVQAS 250

Query: 122 HDMMTTTLDLL 132
             M+     L 
Sbjct: 251 DQMLQRLAQLG 261



 Score = 43.7 bits (101), Expect = 0.009,   Method: Composition-based stats.
 Identities = 16/41 (39%), Positives = 22/41 (53%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I S  IA +GL  Q  +M +IS N+AN  T G   G   +
Sbjct: 1  MIRSLWIAKTGLDAQQTQMDVISNNLANVSTNGFKRGRAVF 41


>gi|15801195|ref|NP_287212.1| flagellar basal body rod protein FlgG [Escherichia coli O157:H7
           EDL933]
 gi|15830710|ref|NP_309483.1| flagellar basal body rod protein FlgG [Escherichia coli O157:H7
           str. Sakai]
 gi|16129041|ref|NP_415596.1| flagellar component of cell-distal portion of basal-body rod
           [Escherichia coli str. K-12 substr. MG1655]
 gi|26247218|ref|NP_753258.1| flagellar basal body rod protein FlgG [Escherichia coli CFT073]
 gi|89107924|ref|AP_001704.1| flagellar component of cell-distal portion of basal-body rod
           [Escherichia coli str. K-12 substr. W3110]
 gi|91210230|ref|YP_540216.1| flagellar basal body rod protein FlgG [Escherichia coli UTI89]
 gi|110641254|ref|YP_668984.1| flagellar basal body rod protein FlgG [Escherichia coli 536]
 gi|110805095|ref|YP_688615.1| flagellar basal body rod protein FlgG [Shigella flexneri 5 str.
           8401]
 gi|117623264|ref|YP_852177.1| flagellar basal body rod protein FlgG [Escherichia coli APEC O1]
 gi|157156521|ref|YP_001462312.1| flagellar basal body rod protein FlgG [Escherichia coli E24377A]
 gi|168747146|ref|ZP_02772168.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
           str. EC4113]
 gi|168758629|ref|ZP_02783636.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
           str. EC4401]
 gi|168764490|ref|ZP_02789497.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
           str. EC4501]
 gi|168767737|ref|ZP_02792744.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
           str. EC4486]
 gi|168773923|ref|ZP_02798930.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
           str. EC4196]
 gi|168783608|ref|ZP_02808615.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
           str. EC4076]
 gi|168790013|ref|ZP_02815020.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
           str. EC869]
 gi|168802023|ref|ZP_02827030.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
           str. EC508]
 gi|170080729|ref|YP_001730049.1| flagellar component of cell-distal portion of basal-body rod
           [Escherichia coli str. K-12 substr. DH10B]
 gi|170679890|ref|YP_001744102.1| flagellar basal body rod protein FlgG [Escherichia coli SMS-3-5]
 gi|188492805|ref|ZP_03000075.1| flagellar basal-body rod protein FlgG [Escherichia coli 53638]
 gi|191168453|ref|ZP_03030241.1| flagellar basal-body rod protein FlgG [Escherichia coli B7A]
 gi|191172450|ref|ZP_03033991.1| flagellar basal-body rod protein FlgG [Escherichia coli F11]
 gi|193064556|ref|ZP_03045636.1| flagellar basal-body rod protein FlgG [Escherichia coli E22]
 gi|193069501|ref|ZP_03050455.1| flagellar basal-body rod protein FlgG [Escherichia coli E110019]
 gi|194438123|ref|ZP_03070216.1| flagellar basal-body rod protein FlgG [Escherichia coli 101-1]
 gi|195935468|ref|ZP_03080850.1| flagellar basal body rod protein FlgG [Escherichia coli O157:H7
           str. EC4024]
 gi|208806632|ref|ZP_03248969.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
           str. EC4206]
 gi|208815071|ref|ZP_03256250.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
           str. EC4045]
 gi|208822750|ref|ZP_03263069.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
           str. EC4042]
 gi|209399139|ref|YP_002269924.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
           str. EC4115]
 gi|209918332|ref|YP_002292416.1| flagellar basal body rod protein FlgG [Escherichia coli SE11]
 gi|215486287|ref|YP_002328718.1| flagellar basal body rod protein FlgG [Escherichia coli O127:H6
           str. E2348/69]
 gi|217328263|ref|ZP_03444345.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
           str. TW14588]
 gi|218553656|ref|YP_002386569.1| flagellar basal body rod protein FlgG [Escherichia coli IAI1]
 gi|218557960|ref|YP_002390873.1| flagellar basal body rod protein FlgG [Escherichia coli S88]
 gi|218694612|ref|YP_002402279.1| flagellar basal body rod protein FlgG [Escherichia coli 55989]
 gi|218700419|ref|YP_002408048.1| flagellar basal body rod protein FlgG [Escherichia coli IAI39]
 gi|218704486|ref|YP_002412005.1| flagellar basal body rod protein FlgG [Escherichia coli UMN026]
 gi|227886564|ref|ZP_04004369.1| flagellar basal body rod protein FlgG [Escherichia coli 83972]
 gi|237706936|ref|ZP_04537417.1| flagellar basal-body rod protein flgG [Escherichia sp. 3_2_53FAA]
 gi|238900332|ref|YP_002926128.1| flagellar component of cell-distal portion of basal-body rod
           [Escherichia coli BW2952]
 gi|253773898|ref|YP_003036729.1| flagellar basal body rod protein FlgG [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254161184|ref|YP_003044292.1| flagellar basal body rod protein FlgG [Escherichia coli B str.
           REL606]
 gi|254792460|ref|YP_003077297.1| flagellar basal body rod protein FlgG [Escherichia coli O157:H7
           str. TW14359]
 gi|256018665|ref|ZP_05432530.1| flagellar basal body rod protein FlgG [Shigella sp. D9]
 gi|256023224|ref|ZP_05437089.1| flagellar basal body rod protein FlgG [Escherichia sp. 4_1_40B]
 gi|260843318|ref|YP_003221096.1| flagellar component FlgG of cell-distal portion of basal-body rod
           [Escherichia coli O103:H2 str. 12009]
 gi|260854561|ref|YP_003228452.1| flagellar component FlgG of cell-distal portion of basal-body rod
           [Escherichia coli O26:H11 str. 11368]
 gi|260867441|ref|YP_003233843.1| flagellar component FlgG of cell-distal portion of basal-body rod
           [Escherichia coli O111:H- str. 11128]
 gi|261227017|ref|ZP_05941298.1| flagellar component of cell-distal portion of basal-body rod
           [Escherichia coli O157:H7 str. FRIK2000]
 gi|261256251|ref|ZP_05948784.1| flagellar component FlgG of cell-distal portion of basal-body rod
           [Escherichia coli O157:H7 str. FRIK966]
 gi|291282098|ref|YP_003498916.1| Flagellar basal-body rod protein flgG [Escherichia coli O55:H7 str.
           CB9615]
 gi|293404362|ref|ZP_06648356.1| flagellar basal-body rod protein flgG [Escherichia coli FVEC1412]
 gi|293409444|ref|ZP_06653020.1| flagellar basal-body rod protein FlgG [Escherichia coli B354]
 gi|293433368|ref|ZP_06661796.1| flagellar basal-body rod protein FlgG [Escherichia coli B088]
 gi|297516691|ref|ZP_06935077.1| flagellar basal body rod protein FlgG [Escherichia coli OP50]
 gi|298380142|ref|ZP_06989747.1| flagellar basal-body rod protein flgG [Escherichia coli FVEC1302]
 gi|300816780|ref|ZP_07097000.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 107-1]
 gi|300821141|ref|ZP_07101290.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 119-7]
 gi|300899597|ref|ZP_07117836.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 198-1]
 gi|300902469|ref|ZP_07120451.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 84-1]
 gi|300918680|ref|ZP_07135261.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 115-1]
 gi|300922604|ref|ZP_07138704.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 182-1]
 gi|300928370|ref|ZP_07143904.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 187-1]
 gi|300938643|ref|ZP_07153372.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 21-1]
 gi|300950173|ref|ZP_07164118.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 116-1]
 gi|300954382|ref|ZP_07166836.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 175-1]
 gi|300974382|ref|ZP_07172594.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 45-1]
 gi|300982619|ref|ZP_07176203.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 200-1]
 gi|301023265|ref|ZP_07187062.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 69-1]
 gi|301029707|ref|ZP_07192761.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 196-1]
 gi|301051138|ref|ZP_07197968.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 185-1]
 gi|301304983|ref|ZP_07211085.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 124-1]
 gi|301328552|ref|ZP_07221613.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 78-1]
 gi|301644990|ref|ZP_07244956.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 146-1]
 gi|306814073|ref|ZP_07448246.1| flagellar basal body rod protein FlgG [Escherichia coli NC101]
 gi|307137713|ref|ZP_07497069.1| flagellar basal body rod protein FlgG [Escherichia coli H736]
 gi|307310144|ref|ZP_07589794.1| flagellar basal-body rod protein FlgG [Escherichia coli W]
 gi|309798072|ref|ZP_07692447.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 145-7]
 gi|312968848|ref|ZP_07783055.1| flagellar basal-body rod protein FlgG [Escherichia coli 2362-75]
 gi|331641622|ref|ZP_08342757.1| flagellar basal-body rod protein FlgG [Escherichia coli H736]
 gi|331646336|ref|ZP_08347439.1| flagellar basal-body rod protein FlgG [Escherichia coli M605]
 gi|331657140|ref|ZP_08358102.1| flagellar basal-body rod protein FlgG [Escherichia coli TA206]
 gi|331662484|ref|ZP_08363407.1| flagellar basal-body rod protein FlgG [Escherichia coli TA143]
 gi|331667478|ref|ZP_08368342.1| flagellar basal-body rod protein FlgG [Escherichia coli TA271]
 gi|331672598|ref|ZP_08373387.1| flagellar basal-body rod protein FlgG [Escherichia coli TA280]
 gi|331676869|ref|ZP_08377565.1| flagellar basal-body rod protein FlgG [Escherichia coli H591]
 gi|331682580|ref|ZP_08383199.1| flagellar basal-body rod protein FlgG [Escherichia coli H299]
 gi|332279734|ref|ZP_08392147.1| flagellar basal-body rod protein FlgG [Shigella sp. D9]
 gi|78100014|sp|P0ABX7|FLGG_ECO57 RecName: Full=Flagellar basal-body rod protein flgG; AltName:
           Full=Distal rod protein
 gi|78100015|sp|P0ABX6|FLGG_ECOL6 RecName: Full=Flagellar basal-body rod protein flgG; AltName:
           Full=Distal rod protein
 gi|78100016|sp|P0ABX5|FLGG_ECOLI RecName: Full=Flagellar basal-body rod protein flgG; AltName:
           Full=Distal rod protein
 gi|12514619|gb|AAG55824.1|AE005318_1 flagellar biosynthesis, cell-distal portion of basal-body rod
           [Escherichia coli O157:H7 str. EDL933]
 gi|26107619|gb|AAN79818.1|AE016759_92 Flagellar basal-body rod protein flgG [Escherichia coli CFT073]
 gi|1787318|gb|AAC74162.1| flagellar component of cell-distal portion of basal-body rod
           [Escherichia coli str. K-12 substr. MG1655]
 gi|4062656|dbj|BAA35887.1| flagellar component of cell-distal portion of basal-body rod
           [Escherichia coli str. K12 substr. W3110]
 gi|13360920|dbj|BAB34879.1| flagellar basal body rod protein flgG [Escherichia coli O157:H7
           str. Sakai]
 gi|91071804|gb|ABE06685.1| flagellar basal body rod protein FlgG [Escherichia coli UTI89]
 gi|110342846|gb|ABG69083.1| flagellar basal-body rod protein FlgG [Escherichia coli 536]
 gi|110614643|gb|ABF03310.1| flagellar basal-body rod protein FlgG [Shigella flexneri 5 str.
           8401]
 gi|115512388|gb|ABJ00463.1| flagellar basal-body rod protein FlgG [Escherichia coli APEC O1]
 gi|157078551|gb|ABV18259.1| flagellar basal-body rod protein FlgG [Escherichia coli E24377A]
 gi|169888564|gb|ACB02271.1| flagellar component of cell-distal portion of basal-body rod
           [Escherichia coli str. K-12 substr. DH10B]
 gi|170517608|gb|ACB15786.1| flagellar basal-body rod protein FlgG [Escherichia coli SMS-3-5]
 gi|187770380|gb|EDU34224.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
           str. EC4196]
 gi|188018193|gb|EDU56315.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
           str. EC4113]
 gi|188488004|gb|EDU63107.1| flagellar basal-body rod protein FlgG [Escherichia coli 53638]
 gi|188999095|gb|EDU68081.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
           str. EC4076]
 gi|189354587|gb|EDU73006.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
           str. EC4401]
 gi|189363057|gb|EDU81476.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
           str. EC4486]
 gi|189365523|gb|EDU83939.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
           str. EC4501]
 gi|189370495|gb|EDU88911.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
           str. EC869]
 gi|189375944|gb|EDU94360.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
           str. EC508]
 gi|190901472|gb|EDV61233.1| flagellar basal-body rod protein FlgG [Escherichia coli B7A]
 gi|190907334|gb|EDV66932.1| flagellar basal-body rod protein FlgG [Escherichia coli F11]
 gi|192927808|gb|EDV82422.1| flagellar basal-body rod protein FlgG [Escherichia coli E22]
 gi|192957249|gb|EDV87698.1| flagellar basal-body rod protein FlgG [Escherichia coli E110019]
 gi|194423059|gb|EDX39053.1| flagellar basal-body rod protein FlgG [Escherichia coli 101-1]
 gi|208726433|gb|EDZ76034.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
           str. EC4206]
 gi|208731719|gb|EDZ80407.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
           str. EC4045]
 gi|208738235|gb|EDZ85918.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
           str. EC4042]
 gi|209160539|gb|ACI37972.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
           str. EC4115]
 gi|209773358|gb|ACI84991.1| flagellar basal body rod protein flgG [Escherichia coli]
 gi|209773360|gb|ACI84992.1| flagellar basal body rod protein flgG [Escherichia coli]
 gi|209773362|gb|ACI84993.1| flagellar basal body rod protein flgG [Escherichia coli]
 gi|209773364|gb|ACI84994.1| flagellar basal body rod protein flgG [Escherichia coli]
 gi|209773366|gb|ACI84995.1| flagellar basal body rod protein flgG [Escherichia coli]
 gi|209911591|dbj|BAG76665.1| flagellar basal-body rod protein FlgG [Escherichia coli SE11]
 gi|215264359|emb|CAS08716.1| flagellar component of cell-distal portion of basal-body rod
           [Escherichia coli O127:H6 str. E2348/69]
 gi|217318690|gb|EEC27116.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
           str. TW14588]
 gi|218351344|emb|CAU97050.1| flagellar component of cell-distal portion of basal-body rod
           [Escherichia coli 55989]
 gi|218360424|emb|CAQ97978.1| flagellar component of cell-distal portion of basal-body rod
           [Escherichia coli IAI1]
 gi|218364729|emb|CAR02419.1| flagellar component of cell-distal portion of basal-body rod
           [Escherichia coli S88]
 gi|218370405|emb|CAR18212.1| flagellar component of cell-distal portion of basal-body rod
           [Escherichia coli IAI39]
 gi|218431583|emb|CAR12462.1| flagellar component of cell-distal portion of basal-body rod
           [Escherichia coli UMN026]
 gi|222032831|emb|CAP75570.1| flagellar basal-body rod protein flgG [Escherichia coli LF82]
 gi|226898146|gb|EEH84405.1| flagellar basal-body rod protein flgG [Escherichia sp. 3_2_53FAA]
 gi|227836768|gb|EEJ47234.1| flagellar basal body rod protein FlgG [Escherichia coli 83972]
 gi|238861100|gb|ACR63098.1| flagellar component of cell-distal portion of basal-body rod
           [Escherichia coli BW2952]
 gi|242376882|emb|CAQ31599.1| flagellar basal-body rod protein FlgG, subunit of Flagellar Motor
           Complex and Flagellum [Escherichia coli BL21(DE3)]
 gi|253324942|gb|ACT29544.1| flagellar basal-body rod protein FlgG [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253973085|gb|ACT38756.1| flagellar component of cell-distal portion of basal-body rod
           [Escherichia coli B str. REL606]
 gi|253977299|gb|ACT42969.1| flagellar component of cell-distal portion of basal-body rod
           [Escherichia coli BL21(DE3)]
 gi|254591860|gb|ACT71221.1| flagellar component of cell-distal portion of basal-body rod
           [Escherichia coli O157:H7 str. TW14359]
 gi|257753210|dbj|BAI24712.1| flagellar component FlgG of cell-distal portion of basal-body rod
           [Escherichia coli O26:H11 str. 11368]
 gi|257758465|dbj|BAI29962.1| flagellar component FlgG of cell-distal portion of basal-body rod
           [Escherichia coli O103:H2 str. 12009]
 gi|257763797|dbj|BAI35292.1| flagellar component FlgG of cell-distal portion of basal-body rod
           [Escherichia coli O111:H- str. 11128]
 gi|260449782|gb|ACX40204.1| flagellar basal-body rod protein FlgG [Escherichia coli DH1]
 gi|281178187|dbj|BAI54517.1| flagellar basal-body rod protein FlgG [Escherichia coli SE15]
 gi|284920901|emb|CBG33964.1| flagellar basal-body rod protein FlgG [Escherichia coli 042]
 gi|290761971|gb|ADD55932.1| Flagellar basal-body rod protein flgG [Escherichia coli O55:H7 str.
           CB9615]
 gi|291324187|gb|EFE63609.1| flagellar basal-body rod protein FlgG [Escherichia coli B088]
 gi|291428948|gb|EFF01973.1| flagellar basal-body rod protein flgG [Escherichia coli FVEC1412]
 gi|291469912|gb|EFF12396.1| flagellar basal-body rod protein FlgG [Escherichia coli B354]
 gi|294490415|gb|ADE89171.1| flagellar basal-body rod protein FlgG [Escherichia coli IHE3034]
 gi|298279840|gb|EFI21348.1| flagellar basal-body rod protein flgG [Escherichia coli FVEC1302]
 gi|299877395|gb|EFI85606.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 196-1]
 gi|300297159|gb|EFJ53544.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 185-1]
 gi|300307084|gb|EFJ61604.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 200-1]
 gi|300318618|gb|EFJ68402.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 175-1]
 gi|300356868|gb|EFJ72738.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 198-1]
 gi|300397110|gb|EFJ80648.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 69-1]
 gi|300405501|gb|EFJ89039.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 84-1]
 gi|300410625|gb|EFJ94163.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 45-1]
 gi|300414174|gb|EFJ97484.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 115-1]
 gi|300421081|gb|EFK04392.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 182-1]
 gi|300450520|gb|EFK14140.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 116-1]
 gi|300456428|gb|EFK19921.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 21-1]
 gi|300463628|gb|EFK27121.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 187-1]
 gi|300526440|gb|EFK47509.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 119-7]
 gi|300530554|gb|EFK51616.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 107-1]
 gi|300839701|gb|EFK67461.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 124-1]
 gi|300844944|gb|EFK72704.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 78-1]
 gi|301076719|gb|EFK91525.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 146-1]
 gi|305852710|gb|EFM53158.1| flagellar basal body rod protein FlgG [Escherichia coli NC101]
 gi|306909862|gb|EFN40356.1| flagellar basal-body rod protein FlgG [Escherichia coli W]
 gi|307553080|gb|ADN45855.1| flagellar basal-body rod protein FlgG [Escherichia coli ABU 83972]
 gi|308118355|gb|EFO55617.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 145-7]
 gi|309701350|emb|CBJ00651.1| flagellar basal-body rod protein FlgG [Escherichia coli ETEC
           H10407]
 gi|312286250|gb|EFR14163.1| flagellar basal-body rod protein FlgG [Escherichia coli 2362-75]
 gi|312945640|gb|ADR26467.1| flagellar basal body rod protein FlgG [Escherichia coli O83:H1 str.
           NRG 857C]
 gi|315060356|gb|ADT74683.1| flagellar component of cell-distal portion of basal-body rod
           [Escherichia coli W]
 gi|315135710|dbj|BAJ42869.1| flagellar basal-body rod protein flgG [Escherichia coli DH1]
 gi|315253879|gb|EFU33847.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 85-1]
 gi|315287367|gb|EFU46778.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 110-3]
 gi|315291072|gb|EFU50435.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 153-1]
 gi|315296709|gb|EFU56004.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 16-3]
 gi|315618248|gb|EFU98838.1| flagellar basal-body rod protein FlgG [Escherichia coli 3431]
 gi|320189761|gb|EFW64417.1| Flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
           str. EC1212]
 gi|320196440|gb|EFW71063.1| Flagellar basal-body rod protein FlgG [Escherichia coli WV_060327]
 gi|320200974|gb|EFW75558.1| Flagellar basal-body rod protein FlgG [Escherichia coli EC4100B]
 gi|320637529|gb|EFX07329.1| flagellar basal body rod protein FlgG [Escherichia coli O157:H7
           str. G5101]
 gi|320643090|gb|EFX12291.1| flagellar basal body rod protein FlgG [Escherichia coli O157:H-
           str. 493-89]
 gi|320648548|gb|EFX17203.1| flagellar basal body rod protein FlgG [Escherichia coli O157:H-
           str. H 2687]
 gi|320653862|gb|EFX21936.1| flagellar basal body rod protein FlgG [Escherichia coli O55:H7 str.
           3256-97 TW 07815]
 gi|320659342|gb|EFX26911.1| flagellar basal body rod protein FlgG [Escherichia coli O55:H7 str.
           USDA 5905]
 gi|320664477|gb|EFX31628.1| flagellar basal body rod protein FlgG [Escherichia coli O157:H7
           str. LSU-61]
 gi|323156885|gb|EFZ43019.1| flagellar basal-body rod protein FlgG [Escherichia coli EPECa14]
 gi|323163703|gb|EFZ49523.1| flagellar basal-body rod protein FlgG [Escherichia coli E128010]
 gi|323175691|gb|EFZ61285.1| flagellar basal-body rod protein FlgG [Escherichia coli 1180]
 gi|323185799|gb|EFZ71160.1| flagellar basal-body rod protein FlgG [Escherichia coli 1357]
 gi|323190590|gb|EFZ75862.1| flagellar basal-body rod protein FlgG [Escherichia coli RN587/1]
 gi|323379083|gb|ADX51351.1| flagellar basal-body rod protein FlgG [Escherichia coli KO11]
 gi|323937818|gb|EGB34082.1| flagellar basal-body rod protein FlgG [Escherichia coli E1520]
 gi|323942547|gb|EGB38714.1| flagellar basal-body rod protein FlgG [Escherichia coli E482]
 gi|323947620|gb|EGB43624.1| flagellar basal-body rod protein FlgG [Escherichia coli H120]
 gi|323953236|gb|EGB49102.1| flagellar basal-body rod protein FlgG [Escherichia coli H252]
 gi|323957902|gb|EGB53614.1| flagellar basal-body rod protein FlgG [Escherichia coli H263]
 gi|323962677|gb|EGB58255.1| flagellar basal-body rod protein FlgG [Escherichia coli H489]
 gi|323967019|gb|EGB62445.1| flagellar basal-body rod protein FlgG [Escherichia coli M863]
 gi|323973333|gb|EGB68522.1| flagellar basal-body rod protein FlgG [Escherichia coli TA007]
 gi|323976549|gb|EGB71637.1| flagellar basal-body rod protein FlgG [Escherichia coli TW10509]
 gi|324007918|gb|EGB77137.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 57-2]
 gi|324013352|gb|EGB82571.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 60-1]
 gi|324017418|gb|EGB86637.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 117-3]
 gi|324117351|gb|EGC11258.1| flagellar basal-body rod protein FlgG [Escherichia coli E1167]
 gi|326339300|gb|EGD63114.1| Flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
           str. 1125]
 gi|326344739|gb|EGD68487.1| Flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
           str. 1044]
 gi|327253477|gb|EGE65115.1| flagellar basal-body rod protein FlgG [Escherichia coli STEC_7v]
 gi|330910892|gb|EGH39402.1| flagellar basal-body rod protein FlgG [Escherichia coli AA86]
 gi|331038420|gb|EGI10640.1| flagellar basal-body rod protein FlgG [Escherichia coli H736]
 gi|331045088|gb|EGI17215.1| flagellar basal-body rod protein FlgG [Escherichia coli M605]
 gi|331055388|gb|EGI27397.1| flagellar basal-body rod protein FlgG [Escherichia coli TA206]
 gi|331060906|gb|EGI32870.1| flagellar basal-body rod protein FlgG [Escherichia coli TA143]
 gi|331065063|gb|EGI36958.1| flagellar basal-body rod protein FlgG [Escherichia coli TA271]
 gi|331070241|gb|EGI41607.1| flagellar basal-body rod protein FlgG [Escherichia coli TA280]
 gi|331075558|gb|EGI46856.1| flagellar basal-body rod protein FlgG [Escherichia coli H591]
 gi|331080211|gb|EGI51390.1| flagellar basal-body rod protein FlgG [Escherichia coli H299]
 gi|332102086|gb|EGJ05432.1| flagellar basal-body rod protein FlgG [Shigella sp. D9]
 gi|333004888|gb|EGK24408.1| flagellar basal-body rod protein FlgG [Shigella flexneri VA-6]
          Length = 260

 Score = 65.7 bits (158), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 19/126 (15%), Positives = 37/126 (29%), Gaps = 3/126 (2%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
            +  I  + L++   R  ++S      +              T   +  +   G     +
Sbjct: 138 PAITIPANALSITIGRDGVVS---VTQQGQAAPVQVGQLNLTTFMNDTGLESIGENLYTE 194

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
                +                G V+  NVNV  E  +M +  R Y  N + +  +  M+
Sbjct: 195 TQSSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAYEINSKAVSTTDQML 254

Query: 126 TTTLDL 131
                L
Sbjct: 255 QKLTQL 260



 Score = 44.1 bits (102), Expect = 0.006,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 21/41 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I+S  IA +GL  Q   M +I+ N+AN  T G       +
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVF 41


>gi|237755437|ref|ZP_04584062.1| flagellar basal-body rod protein FlgG [Sulfurihydrogenibium
           yellowstonense SS-5]
 gi|237692401|gb|EEP61384.1| flagellar basal-body rod protein FlgG [Sulfurihydrogenibium
           yellowstonense SS-5]
          Length = 266

 Score = 65.7 bits (158), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 17/102 (16%), Positives = 32/102 (31%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           N+     T      +         +   GG   K           + +         G +
Sbjct: 164 NSGGQQTTEEVGNIKLYKFINPAGLKAIGGNLFKYTEASGQPIEGDPNTDAFGKLTQGFL 223

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NVN++ E  ++    R Y  N + I  + +M+ T   L 
Sbjct: 224 EMSNVNIVEEMVNLIVAQRAYEVNSKGIITADEMLRTVSTLK 265



 Score = 45.2 bits (105), Expect = 0.003,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 19/41 (46%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          ++ +   + SG+  Q   + +IS NIAN  T G       +
Sbjct: 1  MLRALWTSASGMEAQQTNLDVISHNIANVNTVGFKRSRANF 41


>gi|331652131|ref|ZP_08353150.1| flagellar basal-body rod protein FlgG [Escherichia coli M718]
 gi|331050409|gb|EGI22467.1| flagellar basal-body rod protein FlgG [Escherichia coli M718]
          Length = 260

 Score = 65.7 bits (158), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 20/126 (15%), Positives = 37/126 (29%), Gaps = 3/126 (2%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
            +  I  + L++   R  ++S      +              T   E  +   G     +
Sbjct: 138 PAITIPANALSITIGRDGVVS---VTQQGQAAPVQVGQLNLTTFMNETGLESIGENLYTE 194

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
                +                G V+  NVNV  E  +M +  R Y  N + +  +  M+
Sbjct: 195 TQSSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAYEINSKAVSTTDQML 254

Query: 126 TTTLDL 131
                L
Sbjct: 255 QKLTQL 260



 Score = 44.1 bits (102), Expect = 0.006,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 21/41 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I+S  IA +GL  Q   M +I+ N+AN  T G       +
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVF 41


>gi|260893868|ref|YP_003239965.1| fagellar hook-basal body protein [Ammonifex degensii KC4]
 gi|260866009|gb|ACX53115.1| fagellar hook-basal body protein [Ammonifex degensii KC4]
          Length = 266

 Score = 65.7 bits (158), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/152 (18%), Positives = 49/152 (32%), Gaps = 24/152 (15%)

Query: 6   ASAHIANSG--LAVQSARMQIISE-NIANARTTG------DTPGSDPYRR---------- 46
            + +I  SG  +  Q  R+Q  S  NI  A           + G     +          
Sbjct: 115 GTFYIDKSGYIVNAQGYRLQSTSNDNIQIADPDKIVSISIGSDGVISVVKSDGTKITYNI 174

Query: 47  -----KTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVET 101
                K     + +  +       +    +               SG ++  NV++  E 
Sbjct: 175 GLVTFKNPESLQRVGANLWDVTPNVTDPATPTPGAPGTDGRGYIRSGFLEMSNVDLAQEF 234

Query: 102 ADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            +M  T R Y AN + I  S +++   +DL R
Sbjct: 235 TNMIITQRGYQANARVITTSDELLRELVDLKR 266



 Score = 41.4 bits (95), Expect = 0.037,   Method: Composition-based stats.
 Identities = 15/42 (35%), Positives = 21/42 (50%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S     SGL V   RM +I+ NIAN  TTG       ++
Sbjct: 1  MLRSLFSGVSGLRVHQIRMDVIANNIANINTTGFKAARANFQ 42


>gi|157160605|ref|YP_001457923.1| flagellar basal body rod protein FlgG [Escherichia coli HS]
 gi|170020526|ref|YP_001725480.1| flagellar basal body rod protein FlgG [Escherichia coli ATCC 8739]
 gi|312971215|ref|ZP_07785393.1| flagellar basal-body rod protein FlgG [Escherichia coli 1827-70]
 gi|157066285|gb|ABV05540.1| flagellar basal-body rod protein FlgG [Escherichia coli HS]
 gi|169755454|gb|ACA78153.1| flagellar basal-body rod protein FlgG [Escherichia coli ATCC 8739]
 gi|310336417|gb|EFQ01603.1| flagellar basal-body rod protein FlgG [Escherichia coli 1827-70]
          Length = 260

 Score = 65.7 bits (158), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 19/126 (15%), Positives = 37/126 (29%), Gaps = 3/126 (2%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
            +  I  + L++   R  ++S      +              T   +  +   G     +
Sbjct: 138 PAITIPANALSITIGRDGVVS---VTQQGQAAPVQVGQLNLTTFMNDTGLESIGENLYTE 194

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
                +                G V+  NVNV  E  +M +  R Y  N + +  +  M+
Sbjct: 195 TQSSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAYEINSKAVSTTDQML 254

Query: 126 TTTLDL 131
                L
Sbjct: 255 QKLTQL 260



 Score = 44.5 bits (103), Expect = 0.005,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 21/41 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I+S  IA +GL  Q   M +I+ N+AN  T G       +
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGYKRQRAVF 41


>gi|146343395|ref|YP_001208443.1| putative flagellar basal-body rod protein (flgC) [Bradyrhizobium
           sp. ORS278]
 gi|146196201|emb|CAL80228.1| putative flagellar basal-body rod protein (flgC) [Bradyrhizobium
           sp. ORS278]
          Length = 136

 Score = 65.7 bits (158), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/136 (23%), Positives = 55/136 (40%), Gaps = 8/136 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANA-------RTTGDTPGSDPYRRKTISFEEVMH 56
           +   A  A SG+   + R+++ + N+ANA        T G+ P   P     +   +   
Sbjct: 1   MSPIASNAVSGMNAAARRLEVSASNVANARSTGALPDTNGNVPAGAPKAYDPLELVQS-D 59

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
            +GG     I    +     +DP  P AN  G+V  P V++  E          + AN +
Sbjct: 60  VAGGGTQTTIAKAGNGTSASYDPTAPFANKEGLVAAPRVDLAQEMISQLVAKYSFAANAR 119

Query: 117 TIKQSHDMMTTTLDLL 132
            +K S +M    +D+ 
Sbjct: 120 VLKASDEMSRIVIDMK 135


>gi|312126442|ref|YP_003991316.1| flagellar basal-body rod protein flgg [Caldicellulosiruptor
           hydrothermalis 108]
 gi|311776461|gb|ADQ05947.1| flagellar basal-body rod protein FlgG [Caldicellulosiruptor
           hydrothermalis 108]
          Length = 267

 Score = 65.7 bits (158), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 18/102 (17%), Positives = 34/102 (33%), Gaps = 1/102 (0%)

Query: 33  RTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVAN-ASGIVK 91
              G    S    +           + G  +  +       V E +     +    G ++
Sbjct: 166 DQDGQIQDSGFKIKIVRFINPQGLLAEGKNLYNVSATSGDPVSEEEMEGQKSRILQGFLE 225

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             NV V+ E   +    R Y  N + I+ + DM++   +L R
Sbjct: 226 MSNVQVVDEMVKLIIAQRAYEINSKAIQTADDMLSMANNLKR 267



 Score = 41.4 bits (95), Expect = 0.042,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 21/59 (35%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
          ++ + + A  G+  Q   + IIS N+AN  TT        ++              G  
Sbjct: 1  MMRALYSAALGMKAQQTNVDIISNNLANVNTTAFKKDKAEFKDLLYETLSRADVVAGDG 59


>gi|94264101|ref|ZP_01287900.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
 gi|93455517|gb|EAT05707.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
          Length = 1058

 Score = 65.7 bits (158), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 39/111 (35%), Gaps = 4/111 (3%)

Query: 23   QIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHP 82
             II+ N +N +       +           + +H  GG   +      +           
Sbjct: 952  GIITGNYSNGQVLMQAQVALADFA----NLQGLHKVGGNIFRATTQSGAPVTGMPGTNGL 1007

Query: 83   VANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
               A   ++  NV++  E   M  T R + AN + I  + +M+   +++ R
Sbjct: 1008 GEIAPNSLEQSNVDLGTEFVKMITTQRGFQANSKMITTTDEMLNELINIKR 1058


>gi|32266580|ref|NP_860612.1| flagellar basal body rod protein FlgG [Helicobacter hepaticus ATCC
           51449]
 gi|32262631|gb|AAP77678.1| flagellar distal rod protein FlgG [Helicobacter hepaticus ATCC
           51449]
          Length = 262

 Score = 65.7 bits (158), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 27/85 (31%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +H  G                            G ++  NV ++ E  D+    
Sbjct: 178 FINPAGLHSLGDNLFINTNASGDPVAGVPGLDGFGQLRQGFLELSNVKLVEEMTDLITGQ 237

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R Y AN +TI+ +  M+ T   L R
Sbjct: 238 RAYEANSKTIQTADSMLQTVNGLKR 262



 Score = 38.3 bits (87), Expect = 0.32,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 21/42 (50%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S + A++G+  Q  ++   S NIAN  TTG       + 
Sbjct: 1  MMRSLYTASTGMLGQQLQIDNTSNNIANVNTTGYKKQRAEFA 42


>gi|114777905|ref|ZP_01452819.1| flagellar basal-body rod protein FlgG [Mariprofundus ferrooxydans
           PV-1]
 gi|114551692|gb|EAU54244.1| flagellar basal-body rod protein FlgG [Mariprofundus ferrooxydans
           PV-1]
          Length = 251

 Score = 65.3 bits (157), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 24/132 (18%), Positives = 46/132 (34%), Gaps = 4/132 (3%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
           D L     I     ++Q A+   +S   ANA  T                   +   GG 
Sbjct: 124 DVLQPGITIPADAQSIQIAQDGTVSVTQANATQTVLGQIQIADFLNP----AGLAKLGGN 179

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
             +      +  +         +   G ++  NV+++ E  ++    R Y  N + I+ S
Sbjct: 180 LFQPSNASGTAVIGNPTENGLGSMTQGTLEMSNVSMVEEMVNLIAGQRAYEMNSKAIQAS 239

Query: 122 HDMMTTTLDLLR 133
            +M+ T  ++ R
Sbjct: 240 DEMLQTANNVKR 251


>gi|170768358|ref|ZP_02902811.1| flagellar basal-body rod protein FlgG [Escherichia albertii
           TW07627]
 gi|170123124|gb|EDS92055.1| flagellar basal-body rod protein FlgG [Escherichia albertii
           TW07627]
          Length = 260

 Score = 65.3 bits (157), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 19/126 (15%), Positives = 37/126 (29%), Gaps = 3/126 (2%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
            +  I  + L++   R  ++S      +              T   +  +   G     +
Sbjct: 138 PAITIPANALSITIGRDGVVS---VTQQGQAVPVQVGQLNLTTFMNDTGLESIGENLYSE 194

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
                +                G V+  NVNV  E  +M +  R Y  N + +  +  M+
Sbjct: 195 TQSSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAYEINSKAVSTTDQML 254

Query: 126 TTTLDL 131
                L
Sbjct: 255 QKLTQL 260



 Score = 44.1 bits (102), Expect = 0.006,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 21/41 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I+S  IA +GL  Q   M +I+ N+AN  T G       +
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVF 41


>gi|198244335|ref|YP_002215958.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|197938851|gb|ACH76184.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|326623706|gb|EGE30051.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Dublin str. 3246]
          Length = 260

 Score = 65.3 bits (157), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 19/126 (15%), Positives = 37/126 (29%), Gaps = 3/126 (2%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
            +  I  + L++   R  ++S      +              T   +  +   G     +
Sbjct: 138 PAITIPANALSITIGRDGVVS---VTQQGQAAPVQVGQLNLTTFMNDTGLESIGENLYIE 194

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
                +                G V+  NVNV  E  +M +  R Y  N + +  +  M+
Sbjct: 195 TQSSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAYEINSKAVSTTDQML 254

Query: 126 TTTLDL 131
                L
Sbjct: 255 QKLTQL 260



 Score = 44.5 bits (103), Expect = 0.005,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 21/41 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I+S  IA +GL  Q   M +I+ N+AN  T G       +
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVF 41


>gi|119899025|ref|YP_934238.1| flagellar basal body rod protein FlgG [Azoarcus sp. BH72]
 gi|119671438|emb|CAL95351.1| flagellar basal-body rod protein FlgG [Azoarcus sp. BH72]
          Length = 260

 Score = 65.3 bits (157), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/129 (19%), Positives = 39/129 (30%), Gaps = 3/129 (2%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            L  + +I    L V  A+   +S   A              +  T      +  +G   
Sbjct: 135 PLADNINIPADTLTVTVAKDGTVSVLQA---GQTTPTQIGAIQLATFINSGGLQSAGENL 191

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
             +          +           G V+  NVNV  E  +M  T R Y  N + I+ S 
Sbjct: 192 FLESASSGVATPNQPGTNGTGVLNQGYVETSNVNVAEELVNMIVTQRAYEMNSRAIQTSD 251

Query: 123 DMMTTTLDL 131
            M+     L
Sbjct: 252 SMLGRLTQL 260



 Score = 39.9 bits (91), Expect = 0.11,   Method: Composition-based stats.
 Identities = 13/62 (20%), Positives = 21/62 (33%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I S   A +GL  Q   + +IS N+AN  T G       +                 + 
Sbjct: 1  MIRSLWTARTGLDAQQTSLDVISNNLANVSTNGFKRQRAVFEDLLYQTMRQPGAQSTQQT 60

Query: 64 KK 65
          + 
Sbjct: 61 QV 62


>gi|323704841|ref|ZP_08116418.1| flagellar basal-body rod protein FlgG [Thermoanaerobacterium
           xylanolyticum LX-11]
 gi|323535767|gb|EGB25541.1| flagellar basal-body rod protein FlgG [Thermoanaerobacterium
           xylanolyticum LX-11]
          Length = 266

 Score = 65.3 bits (157), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 18/105 (17%), Positives = 34/105 (32%)

Query: 29  IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASG 88
           I+   + G                + +   G    +           +   G       G
Sbjct: 162 ISVKNSDGTQQDVATLGIYNFQNPDGLLDKGDNLYEATAASGDPGTRDDFQGRMGNVRQG 221

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NV V+ E  +M    R Y  N + I+ + DM++   +L R
Sbjct: 222 FLETSNVQVVNEMVNMIAAQRAYELNSKAIQAADDMLSIANNLRR 266



 Score = 47.6 bits (111), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 24/59 (40%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
          +I +   A SG+  Q   + +IS N+AN  TT        ++       +    +GG  
Sbjct: 1  MIRALWSAASGMNAQQLNVDVISNNLANVNTTAFKRDRAEFQDLIYQTLQTEDVNGGQG 59


>gi|307627452|gb|ADN71756.1| flagellar basal body rod protein FlgG [Escherichia coli UM146]
          Length = 260

 Score = 65.3 bits (157), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 19/126 (15%), Positives = 37/126 (29%), Gaps = 3/126 (2%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
            +  I  + L++   R  ++S      +              T   +  +   G     +
Sbjct: 138 PAITIPANALSITIGRDGVVS---VTQQGQAAPVQVGQLNLTTFMNDTGLESIGENLYTE 194

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
                +                G V+  NVNV  E  +M +  R Y  N + +  +  M+
Sbjct: 195 TQSSCAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAYEINSKAVSTTDQML 254

Query: 126 TTTLDL 131
                L
Sbjct: 255 QKLTQL 260



 Score = 44.5 bits (103), Expect = 0.005,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 21/41 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I+S  IA +GL  Q   M +I+ N+AN  T G       +
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVF 41


>gi|329901232|ref|ZP_08272757.1| Flagellar basal-body rod protein flgG [Oxalobacteraceae bacterium
           IMCC9480]
 gi|327549164|gb|EGF33756.1| Flagellar basal-body rod protein flgG [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 260

 Score = 65.3 bits (157), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 23/128 (17%), Positives = 42/128 (32%), Gaps = 3/128 (2%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +  +  I  +  ++   R   IS  +   + T         +  T      +   G    
Sbjct: 136 IQPAITIPAAAQSLTVGRDGTISITL---QGTAAATQIGALQLATFINPAGLESKGENLY 192

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
            + G   +              + G V+  NV+V+ E  +M +T R Y  N + I  S  
Sbjct: 193 VETGASGTANTNTPGTNGAGILSQGYVETSNVSVVEELVNMIQTQRAYEINSKAISTSDQ 252

Query: 124 MMTTTLDL 131
           M+     L
Sbjct: 253 MLAKLSQL 260



 Score = 42.9 bits (99), Expect = 0.016,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 22/41 (53%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I S  I+ +GL  Q  +M +IS N+AN  T+G       +
Sbjct: 1  MIRSLWISKTGLEAQQTQMDVISNNLANVSTSGFKRSRAVF 41


>gi|256751339|ref|ZP_05492218.1| flagellar basal-body rod protein FlgG [Thermoanaerobacter
           ethanolicus CCSD1]
 gi|256749721|gb|EEU62746.1| flagellar basal-body rod protein FlgG [Thermoanaerobacter
           ethanolicus CCSD1]
          Length = 266

 Score = 65.3 bits (157), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 17/105 (16%), Positives = 33/105 (31%)

Query: 29  IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASG 88
           I+     G T              + +   G    +           +   G       G
Sbjct: 162 ISVKNPDGTTQEVATLGIYNFVNTQGLLSVGSNLYEPTEASGQPGTRDDFEGRMGKVMQG 221

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  N+ ++ E  DM    R Y  N + I+ + +M+    +L R
Sbjct: 222 FLETSNIQIVKEMVDMIAAQRAYEINSKAIQAADEMLGIANNLRR 266



 Score = 47.6 bits (111), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 24/59 (40%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
          ++ +   A SG+  Q   + +I+ N+AN  TT        ++       +  +  GG  
Sbjct: 1  MMRALWSAASGMTAQQLNVDVIANNLANVNTTAFKRDRAEFKDLIYQTLQRENVYGGQG 59


>gi|16760055|ref|NP_455672.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Typhi str. CT18]
 gi|16764535|ref|NP_460150.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|29142174|ref|NP_805516.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
 gi|56413834|ref|YP_150909.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|62179696|ref|YP_216113.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|161614598|ref|YP_001588563.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|167553033|ref|ZP_02346783.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|167994043|ref|ZP_02575135.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|168234105|ref|ZP_02659163.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|168237261|ref|ZP_02662319.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
 gi|168244778|ref|ZP_02669710.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|168264028|ref|ZP_02686001.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|168467131|ref|ZP_02700973.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|168822622|ref|ZP_02834622.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|194446556|ref|YP_002040433.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194450313|ref|YP_002045178.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|194472223|ref|ZP_03078207.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|194734396|ref|YP_002114178.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|197251031|ref|YP_002146864.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|197262058|ref|ZP_03162132.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|197362757|ref|YP_002142394.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
 gi|200390304|ref|ZP_03216915.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|207857313|ref|YP_002243964.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|213424682|ref|ZP_03357447.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Typhi str. E02-1180]
 gi|213582039|ref|ZP_03363865.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-0664]
 gi|213613179|ref|ZP_03371005.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-2068]
 gi|213648928|ref|ZP_03378981.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Typhi str. J185]
 gi|213865503|ref|ZP_03387622.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Typhi str. M223]
 gi|224584317|ref|YP_002638115.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|238911001|ref|ZP_04654838.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Tennessee str. CDC07-0191]
 gi|289828578|ref|ZP_06546403.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-3139]
 gi|60392289|sp|P0A1J3|FLGG_SALTY RecName: Full=Flagellar basal-body rod protein flgG; AltName:
           Full=Distal rod protein
 gi|60392290|sp|P0A1J4|FLGG_SALTI RecName: Full=Flagellar basal-body rod protein flgG; AltName:
           Full=Distal rod protein
 gi|25298926|pir||AD0640 flagellar basal-body rod protein FlgG (distal rod protein)
           [imported] - Salmonella enterica subsp. enterica serovar
           Typhi (strain CT18)
 gi|47677|emb|CAA36314.1| flgG protein product (AA 1-260) [Salmonella enterica subsp.
           enterica serovar Typhimurium]
 gi|16419696|gb|AAL20109.1| flagellar biosynthesis protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|16502349|emb|CAD08303.1| flagellar basal-body rod protein FlgG (distal rod protein)
           [Salmonella enterica subsp. enterica serovar Typhi]
 gi|29137804|gb|AAO69365.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
 gi|56128091|gb|AAV77597.1| flagellar basal-body rod protein FlgG (distal rod protein)
           [Salmonella enterica subsp. enterica serovar Paratyphi A
           str. ATCC 9150]
 gi|62127329|gb|AAX65032.1| flagellar biosynthesis, cell-distal portion of basal-body rod
           [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|161363962|gb|ABX67730.1| hypothetical protein SPAB_02348 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194405219|gb|ACF65441.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194408617|gb|ACF68836.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|194458587|gb|EDX47426.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|194709898|gb|ACF89119.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|195630467|gb|EDX49093.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|197094234|emb|CAR59739.1| flagellar basal-body rod protein FlgG (distal rod protein)
           [Salmonella enterica subsp. enterica serovar Paratyphi A
           str. AKU_12601]
 gi|197214734|gb|ACH52131.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|197240313|gb|EDY22933.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|197289797|gb|EDY29158.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
 gi|199602749|gb|EDZ01295.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|205322431|gb|EDZ10270.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|205328014|gb|EDZ14778.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|205331903|gb|EDZ18667.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|205336447|gb|EDZ23211.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|205341038|gb|EDZ27802.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|205347402|gb|EDZ34033.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|206709116|emb|CAR33449.1| flagellar basal-body rod protein FlgG (distal rod protein)
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. P125109]
 gi|224468844|gb|ACN46674.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|261246390|emb|CBG24199.1| flagellar basal-body rod protein FlgG (distal rod protein)
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. D23580]
 gi|267992953|gb|ACY87838.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 14028S]
 gi|301157720|emb|CBW17212.1| flagellar basal-body rod protein FlgG (distal rod protein)
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. SL1344]
 gi|312912166|dbj|BAJ36140.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Typhimurium str. T000240]
 gi|320086381|emb|CBY96154.1| Flagellar basal-body rod protein flgG Distal rod protein
           [Salmonella enterica subsp. enterica serovar Weltevreden
           str. 2007-60-3289-1]
 gi|321223797|gb|EFX48860.1| Flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Typhimurium str. TN061786]
 gi|322616549|gb|EFY13458.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315996572]
 gi|322620510|gb|EFY17374.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-1]
 gi|322622504|gb|EFY19349.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-3]
 gi|322629655|gb|EFY26430.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-4]
 gi|322632625|gb|EFY29371.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-1]
 gi|322636880|gb|EFY33583.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-2]
 gi|322641582|gb|EFY38220.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. 531954]
 gi|322644072|gb|EFY40618.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. NC_MB110209-0054]
 gi|322650028|gb|EFY46446.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. OH_2009072675]
 gi|322653953|gb|EFY50276.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. CASC_09SCPH15965]
 gi|322658485|gb|EFY54747.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. 19N]
 gi|322663343|gb|EFY59545.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. 81038-01]
 gi|322670077|gb|EFY66217.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. MD_MDA09249507]
 gi|322674859|gb|EFY70950.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. 414877]
 gi|322676671|gb|EFY72738.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. 366867]
 gi|322682593|gb|EFY78612.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. 413180]
 gi|322686654|gb|EFY82633.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. 446600]
 gi|322714166|gb|EFZ05737.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. A50]
 gi|323129449|gb|ADX16879.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 4/74]
 gi|323195768|gb|EFZ80944.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609458-1]
 gi|323198340|gb|EFZ83444.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556150-1]
 gi|323209179|gb|EFZ94116.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. 507440-20]
 gi|323209683|gb|EFZ94612.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556152]
 gi|323217861|gb|EGA02576.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB101509-0077]
 gi|323222149|gb|EGA06533.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB102109-0047]
 gi|323224921|gb|EGA09179.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB110209-0055]
 gi|323229663|gb|EGA13786.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB111609-0052]
 gi|323232888|gb|EGA16984.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009083312]
 gi|323240623|gb|EGA24665.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009085258]
 gi|323242937|gb|EGA26958.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315731156]
 gi|323250254|gb|EGA34143.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2009159199]
 gi|323252629|gb|EGA36467.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008282]
 gi|323258843|gb|EGA42496.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008283]
 gi|323261032|gb|EGA44625.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008284]
 gi|323266941|gb|EGA50426.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008285]
 gi|323269982|gb|EGA53431.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008287]
 gi|332988070|gb|AEF07053.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Typhimurium str. UK-1]
          Length = 260

 Score = 65.3 bits (157), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 19/126 (15%), Positives = 37/126 (29%), Gaps = 3/126 (2%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
            +  I  + L++   R  ++S      +              T   +  +   G     +
Sbjct: 138 PAITIPANALSITIGRDGVVS---VTQQGQAAPVQVGQLNLTTFMNDTGLESIGENLYIE 194

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
                +                G V+  NVNV  E  +M +  R Y  N + +  +  M+
Sbjct: 195 TQSSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAYEINSKAVSTTDQML 254

Query: 126 TTTLDL 131
                L
Sbjct: 255 QKLTQL 260



 Score = 44.1 bits (102), Expect = 0.006,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 21/41 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I+S  IA +GL  Q   M +I+ N+AN  T G       +
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVF 41


>gi|152980126|ref|YP_001353113.1| FlgG flagellar basal body rod protein [Janthinobacterium sp.
           Marseille]
 gi|151280203|gb|ABR88613.1| FlgG flagellar basal body rod protein [Janthinobacterium sp.
           Marseille]
          Length = 260

 Score = 65.3 bits (157), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 27/131 (20%), Positives = 45/131 (34%), Gaps = 7/131 (5%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            +  +  I  +  A+  +R  I+S         G T  ++    +  +F           
Sbjct: 135 PIQPAIVIPANATAISISRDGIVS-----VTVPGTTAQTEVGALQVATFINPAGLESKGE 189

Query: 63  VKKIGVDQSTFVEEFDPGHPVAN--ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
              +    S      +PG   A       V+  NVNV+ E  +M +T R Y  N + I  
Sbjct: 190 NLYVETTASGNPTTNNPGTNGAGYVQQNYVETSNVNVVEEMVNMIQTQRAYEINSKAIST 249

Query: 121 SHDMMTTTLDL 131
           S  M+     L
Sbjct: 250 SDQMLQRLTQL 260



 Score = 41.4 bits (95), Expect = 0.037,   Method: Composition-based stats.
 Identities = 15/41 (36%), Positives = 22/41 (53%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I S  IA +GL  Q  +M +IS N+AN  T+G       +
Sbjct: 1  MIRSLWIAKTGLDAQQTQMDVISNNLANVSTSGFKRSRAVF 41


>gi|42526518|ref|NP_971616.1| flagellar basal body rod protein FlgG [Treponema denticola ATCC
           35405]
 gi|41816711|gb|AAS11497.1| flagellar basal-body rod protein FlgG [Treponema denticola ATCC
           35405]
 gi|325473456|gb|EGC76651.1| flagellar basal-body rod protein FlgG [Treponema denticola F0402]
          Length = 264

 Score = 65.3 bits (157), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 14/86 (16%), Positives = 28/86 (32%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                  +   G    ++     +                  ++  NV+ + E  +M   
Sbjct: 179 RFQNNAGLSAEGSNLFRQTPASGTAIPGRPGFTGFGRTEHKFLEMSNVSTVSEMVNMIVA 238

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y  N + I+ S +M+ T + L R
Sbjct: 239 QRAYEFNSKAIQTSDNMLGTAVSLKR 264



 Score = 42.2 bits (97), Expect = 0.024,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 20/41 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          ++ S   A +G+  Q A +  ++ N+AN  T+G       +
Sbjct: 1  MVRSLWTAATGMNTQQANIDTVANNLANVNTSGFKKQRAEF 41


>gi|283833628|ref|ZP_06353369.1| flagellar basal-body rod protein FlgG [Citrobacter youngae ATCC
           29220]
 gi|291071311|gb|EFE09420.1| flagellar basal-body rod protein FlgG [Citrobacter youngae ATCC
           29220]
          Length = 260

 Score = 65.3 bits (157), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 20/126 (15%), Positives = 37/126 (29%), Gaps = 3/126 (2%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
            +  I  + L++   R  I+S      +              T   +  +   G     +
Sbjct: 138 PAITIPANALSITIGRDGIVS---VTQQGQAAPVQVGQLNLTTFMNDTGLESIGENLYTE 194

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
                +                G V+  NVNV  E  +M +  R Y  N + +  +  M+
Sbjct: 195 TQSSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAYEINSKAVSTTDQML 254

Query: 126 TTTLDL 131
                L
Sbjct: 255 QKLTQL 260



 Score = 44.1 bits (102), Expect = 0.006,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 21/41 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I+S  IA +GL  Q   M +I+ N+AN  T G       +
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVF 41


>gi|114330363|ref|YP_746585.1| flagellar basal body rod protein FlgG [Nitrosomonas eutropha C91]
 gi|114307377|gb|ABI58620.1| flagellar basal-body rod protein FlgG [Nitrosomonas eutropha C91]
          Length = 260

 Score = 65.3 bits (157), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 25/129 (19%), Positives = 44/129 (34%), Gaps = 3/129 (2%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            L  S  I  + L++   R   +S  +     T    G+   +  +      +   G   
Sbjct: 135 PLQPSITIPPNTLSITIGRDGTVSV-LTPGSATPLPVGN--IQLTSFINPAGLQRFGENL 191

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
             +                      G V+  NVNV+ E  +M +T R Y  N ++I+ S 
Sbjct: 192 YLETMSSGVPNPGIPGTNGIGLLNQGFVETSNVNVVEELVEMIQTQRAYEINSRSIQTSD 251

Query: 123 DMMTTTLDL 131
            M++    L
Sbjct: 252 QMLSRLTQL 260



 Score = 45.6 bits (106), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/33 (36%), Positives = 20/33 (60%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ S  I+ +GL  Q  +M +I+ N+AN  T G
Sbjct: 1  MVRSLWISKTGLDAQQTKMDVIANNLANISTNG 33


>gi|300311354|ref|YP_003775446.1| flagellar basal-body rod protein FlgG [Herbaspirillum seropedicae
           SmR1]
 gi|300074139|gb|ADJ63538.1| flagellar basal-body rod FlgG protein [Herbaspirillum seropedicae
           SmR1]
          Length = 260

 Score = 65.3 bits (157), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 20/99 (20%), Positives = 31/99 (31%)

Query: 33  RTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKY 92
             +  T      +  T      +   G     +     +            A   G V+ 
Sbjct: 162 AGSTATTQIGTIQVATFINPAGLESRGENLYMETAASGAPNPNNPGTNGAGALWQGYVET 221

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NVNV+ E  +M +T R Y  N + I  S  M+     L
Sbjct: 222 SNVNVVEELVNMIQTQRAYEINSKAITTSDQMLAKLSQL 260



 Score = 42.6 bits (98), Expect = 0.020,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 21/41 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I S  I+ +GL  Q  ++ +IS N+AN  T G       +
Sbjct: 1  MIRSLWISKTGLDAQQTQLDVISNNLANVSTNGFKRSRAVF 41


>gi|183220929|ref|YP_001838925.1| flagellar basal-body rod protein FlgG [Leptospira biflexa serovar
           Patoc strain 'Patoc 1 (Paris)']
 gi|189911025|ref|YP_001962580.1| endoflagellar distal basal body rod protein [Leptospira biflexa
           serovar Patoc strain 'Patoc 1 (Ames)']
 gi|167775701|gb|ABZ94002.1| Endoflagellar distal basal body rod protein [Leptospira biflexa
           serovar Patoc strain 'Patoc 1 (Ames)']
 gi|167779351|gb|ABZ97649.1| Flagellar basal-body rod protein FlgG (Distal rod protein)
           [Leptospira biflexa serovar Patoc strain 'Patoc 1
           (Paris)']
          Length = 286

 Score = 65.3 bits (157), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 30/64 (46%)

Query: 70  QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
           +S     F          G ++  NV+V+ E  DM E NR Y AN +T++    ++    
Sbjct: 223 ESGEPTAFPELLAPQVLQGYLEASNVSVVTEMVDMIEVNRAYEANSKTMQTQDSLLGRLF 282

Query: 130 DLLR 133
           +++R
Sbjct: 283 EIMR 286



 Score = 48.7 bits (114), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 17/103 (16%), Positives = 33/103 (32%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           ++   +   +G+  Q  RM +++ N+AN   TG    +  ++             G  + 
Sbjct: 1   MLRGLYTGANGMISQQVRMDVVANNLANVDKTGFKKDTTVFKTFPEMLLHRYSEDGIGKT 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
                D S  V +   G  V       +   V       D+  
Sbjct: 61  PMGSFDTSPVVGKLGFGAEVNEVYTRFEQGAVKKTDNIFDLMV 103


>gi|320354342|ref|YP_004195681.1| flagellar basal-body rod protein FlgG [Desulfobulbus propionicus
           DSM 2032]
 gi|320122844|gb|ADW18390.1| flagellar basal-body rod protein FlgG [Desulfobulbus propionicus
           DSM 2032]
          Length = 260

 Score = 65.3 bits (157), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 20/122 (16%), Positives = 37/122 (30%), Gaps = 12/122 (9%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVD 69
           I+ +G+          S  + N                    +  +   G    ++    
Sbjct: 150 ISQTGVVSAIVGDDTTSTELGNVDLVD------------FVNDAGLIAIGRNLFRETEAS 197

Query: 70  QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
            +  +             G V+  NVN++ E   M  T R +  N   I  S +MM T  
Sbjct: 198 GAPLIGAPGTNGIGTLLQGYVENSNVNLVEEMTHMITTQRAFEINSNVITTSDEMMQTVT 257

Query: 130 DL 131
           ++
Sbjct: 258 NM 259



 Score = 41.0 bits (94), Expect = 0.050,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 22/41 (53%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          + S   + +G++ Q+  M +I+ N+AN  TTG       ++
Sbjct: 1  MRSLWTSTTGMSAQNLNMDVIANNLANVSTTGFKKSRADFQ 41


>gi|315185552|gb|EFU19321.1| flagellar basal-body rod protein FlgG [Spirochaeta thermophila DSM
           6578]
          Length = 264

 Score = 65.3 bits (157), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 24/45 (53%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NV+V+ E  +M    R Y  N + ++ S  M+ T ++L R
Sbjct: 220 FLEMSNVSVVNEMVEMIVAQRAYELNSKAVQTSDSMLGTAVNLKR 264



 Score = 41.0 bits (94), Expect = 0.059,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 20/42 (47%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S   A SG+  Q   +  ++ N++N  TTG       ++
Sbjct: 1  MMRSLWTAASGMVGQQYHIDTVANNLSNVNTTGFKKNRVDFQ 42


>gi|307718428|ref|YP_003873960.1| flagellar basal-body rod protein [Spirochaeta thermophila DSM 6192]
 gi|306532153|gb|ADN01687.1| flagellar basal-body rod protein [Spirochaeta thermophila DSM 6192]
          Length = 264

 Score = 65.3 bits (157), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 24/45 (53%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NV+V+ E  +M    R Y  N + ++ S  M+ T ++L R
Sbjct: 220 FLEMSNVSVVNEMVEMIVAQRAYELNSKAVQTSDSMLGTAVNLKR 264



 Score = 41.0 bits (94), Expect = 0.059,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 20/42 (47%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S   A SG+  Q   +  ++ N++N  TTG       ++
Sbjct: 1  MMRSLWTAASGMVGQQYHIDTVANNLSNVNTTGFKKNRVDFQ 42


>gi|161503733|ref|YP_001570845.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160865080|gb|ABX21703.1| hypothetical protein SARI_01818 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 260

 Score = 65.3 bits (157), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 19/126 (15%), Positives = 36/126 (28%), Gaps = 3/126 (2%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
            +  I  + L +   R  ++S      +              T   +  +   G     +
Sbjct: 138 PAITIPANALNITIGRDGVVS---VTQQGQAAPVQVGQLNLTTFMNDTGLESIGENLYIE 194

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
                +                G V+  NVNV  E  +M +  R Y  N + +  +  M+
Sbjct: 195 TQSSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAYEINSKAVSTTDQML 254

Query: 126 TTTLDL 131
                L
Sbjct: 255 QKLTQL 260



 Score = 44.1 bits (102), Expect = 0.006,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 21/41 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I+S  IA +GL  Q   M +I+ N+AN  T G       +
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVF 41


>gi|194432508|ref|ZP_03064795.1| flagellar basal-body rod protein FlgG [Shigella dysenteriae 1012]
 gi|194419395|gb|EDX35477.1| flagellar basal-body rod protein FlgG [Shigella dysenteriae 1012]
 gi|332092914|gb|EGI97982.1| flagellar basal-body rod protein FlgG [Shigella dysenteriae 155-74]
          Length = 260

 Score = 65.3 bits (157), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 19/126 (15%), Positives = 37/126 (29%), Gaps = 3/126 (2%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
            +  I  + L++   R  ++S      +              T   +  +   G     +
Sbjct: 138 PAITIPANALSISIGRDGVVS---VTQQGQAAPVQVGQLNLTTFMNDTGLESIGENLYTE 194

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
                +                G V+  NVNV  E  +M +  R Y  N + +  +  M+
Sbjct: 195 TQSSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAYEINSKAVSTTDQML 254

Query: 126 TTTLDL 131
                L
Sbjct: 255 QKLTQL 260



 Score = 44.1 bits (102), Expect = 0.006,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 21/41 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I+S  IA +GL  Q   M +I+ N+AN  T G       +
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVF 41


>gi|150020364|ref|YP_001305718.1| flagellar basal-body rod protein FlgG [Thermosipho melanesiensis
           BI429]
 gi|149792885|gb|ABR30333.1| flagellar basal-body rod protein FlgG [Thermosipho melanesiensis
           BI429]
          Length = 261

 Score = 65.3 bits (157), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 15/86 (17%), Positives = 31/86 (36%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                  +   G     +     +            +   G V+  NV+++ E  DM   
Sbjct: 176 RFINPSGLKAIGDNLYLETPASGAPVEGTAGQDGFGSILQGYVEKSNVDIVKEMVDMISA 235

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y  N +T++ + +M+ T  ++ R
Sbjct: 236 MRAYELNSRTVQTADEMLRTASNMKR 261



 Score = 41.4 bits (95), Expect = 0.040,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 20/42 (47%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          +I   + A +G+  Q  ++  +S NIAN  T G       ++
Sbjct: 1  MINGLYTAATGMWAQQFKLDTLSNNIANVDTAGYKKVKTEFQ 42


>gi|167038784|ref|YP_001661769.1| hypothetical protein Teth514_0111 [Thermoanaerobacter sp. X514]
 gi|300913631|ref|ZP_07130948.1| fagellar hook-basal body protein [Thermoanaerobacter sp. X561]
 gi|307723354|ref|YP_003903105.1| fagellar hook-basal body protein [Thermoanaerobacter sp. X513]
 gi|166853024|gb|ABY91433.1| protein of unknown function DUF1078 domain protein
           [Thermoanaerobacter sp. X514]
 gi|300890316|gb|EFK85461.1| fagellar hook-basal body protein [Thermoanaerobacter sp. X561]
 gi|307580415|gb|ADN53814.1| fagellar hook-basal body protein [Thermoanaerobacter sp. X513]
          Length = 266

 Score = 65.3 bits (157), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 17/105 (16%), Positives = 33/105 (31%)

Query: 29  IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASG 88
           I+     G T              + +   G    +           +   G       G
Sbjct: 162 ISVKNPDGTTQEVATLGIYNFVNTQGLLSVGSNLYEPTEASGQPGTRDDFEGRMGKVMQG 221

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  N+ ++ E  DM    R Y  N + I+ + +M+    +L R
Sbjct: 222 FLETSNIQIVKEMVDMIAAQRAYEINSKAIQAADEMLGIANNLRR 266



 Score = 47.9 bits (112), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 13/90 (14%), Positives = 27/90 (30%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ +   A SG+  Q   + +I+ N+AN  TT        ++       +  +  GG   
Sbjct: 1  MMRALWSAASGMTAQQLNVDVIANNLANVNTTAFKRDRAEFKDLIYQTLQRENVYGGQGK 60

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
                                +    + P
Sbjct: 61 PVNMQVGVGVRPSAIVKDFTEGSLQQTENP 90


>gi|160901817|ref|YP_001567398.1| flagellar basal-body rod protein FlgG [Petrotoga mobilis SJ95]
 gi|160359461|gb|ABX31075.1| flagellar basal-body rod protein FlgG [Petrotoga mobilis SJ95]
          Length = 261

 Score = 65.3 bits (157), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 17/86 (19%), Positives = 30/86 (34%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                  +   G     +     +            A   G ++  NV+V+ E  DM   
Sbjct: 176 RFLNPGGLKPIGNNLYSETPASGNPTEGIPGQDGFGALQQGYLEKSNVDVVKEMVDMIVA 235

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y  N +TI  + +M+ T  ++ R
Sbjct: 236 QRAYDINSKTITTADEMLRTVSNVKR 261



 Score = 40.6 bits (93), Expect = 0.069,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 23/42 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S + A +G+  +  ++ IIS N+AN  TTG       ++
Sbjct: 1  MLVSLYNAATGMNAEQRKLDIISNNLANVDTTGYKKQRAEFQ 42


>gi|154249604|ref|YP_001410429.1| flagellar basal-body rod protein FlgG [Fervidobacterium nodosum
           Rt17-B1]
 gi|154153540|gb|ABS60772.1| flagellar basal-body rod protein FlgG [Fervidobacterium nodosum
           Rt17-B1]
          Length = 261

 Score = 64.9 bits (156), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 22/130 (16%), Positives = 41/130 (31%), Gaps = 4/130 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           L  +  +  + +++  +   I+S  +A     G                  +   G    
Sbjct: 136 LSPAIVVPQNAVSLTVSPDGIVSVELA----DGTIQQLGTITLVRFVNPAGLKSIGDNLY 191

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
            +                      G V+  NV+V+ E  DM    R Y  N ++I  +  
Sbjct: 192 LQTNASGEPIEGVGGQDGFGTIMQGYVEKSNVDVVKEMVDMITAMRAYEFNSRSIITADQ 251

Query: 124 MMTTTLDLLR 133
           M+ T  +L R
Sbjct: 252 MLQTASNLRR 261



 Score = 41.4 bits (95), Expect = 0.042,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 21/42 (50%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          +I S + A +G+  Q  +M  +S NIAN  T G       ++
Sbjct: 1  MINSLYTAATGMWTQQFKMDTVSNNIANVDTAGYKKIKAEFQ 42


>gi|317153844|ref|YP_004121892.1| flagellar basal-body rod protein FlgG [Desulfovibrio aespoeensis
           Aspo-2]
 gi|316944095|gb|ADU63146.1| flagellar basal-body rod protein FlgG [Desulfovibrio aespoeensis
           Aspo-2]
          Length = 260

 Score = 64.9 bits (156), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 15/105 (14%), Positives = 29/105 (27%)

Query: 29  IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASG 88
           I+     G                  +   G    +                +    A  
Sbjct: 156 ISALDKDGAALAETDIDIYRFQNPAGLTAIGRNFYRGSEASGDAVAGTPGDENFGTLAQA 215

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NV ++ E   +    R Y  N + I  S  M+ T +++ R
Sbjct: 216 FLEGSNVEMVDEMVGLIVGQRAYEINSKAITTSDGMLQTAINIKR 260



 Score = 40.6 bits (93), Expect = 0.066,   Method: Composition-based stats.
 Identities = 13/91 (14%), Positives = 24/91 (26%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ S   A +G+      +  +S N+AN  TTG       +        ++         
Sbjct: 1  MMRSLWTAATGMVAMQTHIDTLSNNLANVNTTGFKKSRAEFEDLMYQTLQIAGTETQSGG 60

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIVKYPN 94
          +     Q          H            N
Sbjct: 61 RLPVGMQVGMGVRPVSVHKFFTQGDFKNTGN 91


>gi|225849135|ref|YP_002729299.1| flagellar basal-body rod protein FlgG [Sulfurihydrogenibium
           azorense Az-Fu1]
 gi|225644492|gb|ACN99542.1| flagellar basal-body rod protein FlgG [Sulfurihydrogenibium
           azorense Az-Fu1]
          Length = 266

 Score = 64.9 bits (156), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 32/102 (31%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           N+     T      +      +  +   G    K           + +         G +
Sbjct: 164 NSGGQQTTEEVGDIKLYRFMNQAGLKAIGQNLFKYTEASGEPIEGDPNTDGFGKITQGFL 223

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NVN++ E  ++    R Y  N + I  + +M+ T   L 
Sbjct: 224 EASNVNIVEEMVNLIVAQRAYEVNSKGIITADEMLRTVSTLK 265



 Score = 45.6 bits (106), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 19/41 (46%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          ++ +   + SG+  Q   + +IS NIAN  T G       +
Sbjct: 1  MLRALWTSASGMEAQQTNLDVISHNIANVNTVGFKRSRANF 41


>gi|218781795|ref|YP_002433113.1| hypothetical protein Dalk_3959 [Desulfatibacillum alkenivorans
           AK-01]
 gi|218763179|gb|ACL05645.1| Putative flagellar basal body rod protein [Desulfatibacillum
           alkenivorans AK-01]
          Length = 117

 Score = 64.9 bits (156), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 31/130 (23%), Positives = 51/130 (39%), Gaps = 13/130 (10%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +IA  + + S L     + Q  + N AN  T G         +KT               
Sbjct: 1   MIAGINASVSALNAYGRKFQSTANNTANIDTDG--------YKKTRVTMSEAANGSVEAK 52

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
            +     S  V E       +  S +V+  NV++  E  +     R Y ANL ++K   +
Sbjct: 53  SEKVNSPSPIVSELT-----SEGSVLVEKSNVDLAQEVTNQILAARGYEANLASVKAFDE 107

Query: 124 MMTTTLDLLR 133
           M+ +TLDL++
Sbjct: 108 MLGSTLDLIK 117


>gi|152990377|ref|YP_001356099.1| flagellar basal body and hook protein FlgE [Nitratiruptor sp.
           SB155-2]
 gi|151422238|dbj|BAF69742.1| flagellar basal body and hook protein FlgE [Nitratiruptor sp.
           SB155-2]
          Length = 533

 Score = 64.9 bits (156), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 28/48 (58%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            SG+++  NV++  E  ++    R Y AN +TI  S  ++ TT+D+ R
Sbjct: 486 RSGMLEMSNVDISQEFINLITAQRAYQANAKTITTSDQILQTTMDIKR 533



 Score = 44.1 bits (102), Expect = 0.006,   Method: Composition-based stats.
 Identities = 20/64 (31%), Positives = 28/64 (43%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ S +  NSGL      + +IS+NIAN  T G       +     S       SG  R 
Sbjct: 1  MLQSFYTGNSGLNANKTWLGVISDNIANVNTNGFKQERVNFSDLVASSLTTYSSSGAPRN 60

Query: 64 KKIG 67
          K+IG
Sbjct: 61 KEIG 64


>gi|253998486|ref|YP_003050549.1| flagellar basal-body rod protein FlgG [Methylovorus sp. SIP3-4]
 gi|313200561|ref|YP_004039219.1| flagellar basal-body rod protein flgg [Methylovorus sp. MP688]
 gi|253985165|gb|ACT50022.1| flagellar basal-body rod protein FlgG [Methylovorus sp. SIP3-4]
 gi|312439877|gb|ADQ83983.1| flagellar basal-body rod protein FlgG [Methylovorus sp. MP688]
          Length = 260

 Score = 64.9 bits (156), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 23/128 (17%), Positives = 40/128 (31%), Gaps = 3/128 (2%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +  +  I  +  ++   R   +S  + N+     T      +  T      +   G    
Sbjct: 136 IQPAITIPANAQSITVGRDGTVSVTLPNS---VATTQIGTIQLATFINPAGLQSKGENLY 192

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
            +     +                G V+  NVNV+ E   M +T R Y  N + I  S  
Sbjct: 193 VETSASGTASTNTPGANGAGVLNQGYVETSNVNVVEELVSMIQTQRAYEINSKAITTSDQ 252

Query: 124 MMTTTLDL 131
           M+     L
Sbjct: 253 MLQRLSQL 260



 Score = 42.2 bits (97), Expect = 0.027,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 21/41 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I S  I+ +GL  Q  +M +I+ N+AN  T G       +
Sbjct: 1  MIRSLWISKTGLDAQQTQMDVIANNLANVSTNGFKRSRAVF 41


>gi|323204838|gb|EFZ89832.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609460]
          Length = 255

 Score = 64.9 bits (156), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 19/126 (15%), Positives = 37/126 (29%), Gaps = 3/126 (2%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
            +  I  + L++   R  ++S      +              T   +  +   G     +
Sbjct: 133 PAITIPANALSITIGRDGVVS---VTQQGQAAPVQVGQLNLTTFMNDTGLESIGENLYIE 189

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
                +                G V+  NVNV  E  +M +  R Y  N + +  +  M+
Sbjct: 190 TQSSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAYEINSKAVSTTDQML 249

Query: 126 TTTLDL 131
                L
Sbjct: 250 QKLTQL 255



 Score = 34.5 bits (77), Expect = 4.6,   Method: Composition-based stats.
 Identities = 10/32 (31%), Positives = 15/32 (46%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +GL  Q   M +I+ N+AN  T G       +
Sbjct: 5  TGLDAQQTNMDVIANNLANVSTNGFKRQRAVF 36


>gi|82702455|ref|YP_412021.1| hypothetical protein Nmul_A1326 [Nitrosospira multiformis ATCC
           25196]
 gi|82410520|gb|ABB74629.1| conserved hypothetical protein [Nitrosospira multiformis ATCC
           25196]
          Length = 260

 Score = 64.9 bits (156), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 22/126 (17%), Positives = 42/126 (33%), Gaps = 3/126 (2%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
            +  I  +  ++   R  I+S      + +         +  T      +   G     +
Sbjct: 138 PAITIPPNAQSITVGRDGIVS---VTTQDSTTPVQVGNLQLATFINPAGLQSVGENLYVE 194

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
                +  V             G V+  NVNV+ E  +M +T R Y  N ++++ S  M+
Sbjct: 195 TASSGTPNVTNPGTDGAGLLNQGYVETSNVNVVEELVNMIQTQRAYEINSKSVQTSDQML 254

Query: 126 TTTLDL 131
                L
Sbjct: 255 QRLTQL 260



 Score = 44.5 bits (103), Expect = 0.005,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 21/41 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I S  I+ +GL  Q  +M +I+ N+AN  T G       +
Sbjct: 1  MIRSLWISKTGLDAQQTQMDVIANNLANVSTNGFKRSRAVF 41


>gi|116694221|ref|YP_728432.1| flagellar basal body rod protein FlgG [Ralstonia eutropha H16]
 gi|113528720|emb|CAJ95067.1| flagellar basal body rod protein [Ralstonia eutropha H16]
          Length = 261

 Score = 64.9 bits (156), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 26/131 (19%), Positives = 44/131 (33%), Gaps = 7/131 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +  +  I  + L++  AR   +S         G +      + +  +F            
Sbjct: 136 IQPAITIPANTLSMTIARDGTVS-----VTQPGSSANVQVGQLQLATFMNPAGLESMGEN 190

Query: 64  KKIGVDQSTFVEEFDPGHPVAN--ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
             +  D S       PG   A       V+  NVNV+ E   M +T R Y  N + ++ S
Sbjct: 191 LYVQTDASGAPNTTVPGLNGAGVVQQNYVEASNVNVVEELVSMIQTQRAYEINSKAVQAS 250

Query: 122 HDMMTTTLDLL 132
             M+     L 
Sbjct: 251 DQMLQRLSQLG 261



 Score = 43.3 bits (100), Expect = 0.010,   Method: Composition-based stats.
 Identities = 16/41 (39%), Positives = 22/41 (53%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I S  IA +GL  Q  +M +IS N+AN  T G   G   +
Sbjct: 1  MIRSLWIAKTGLDAQQTQMDVISNNLANVSTNGFKRGRAVF 41


>gi|15606190|ref|NP_213567.1| flagellar hook basal-body protein FlgG [Aquifex aeolicus VF5]
 gi|2983377|gb|AAC06963.1| flagellar hook basal-body protein FlgG [Aquifex aeolicus VF5]
          Length = 262

 Score = 64.9 bits (156), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 18/131 (13%), Positives = 40/131 (30%), Gaps = 3/131 (2%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            L     I    ++V  A    +S      +   +                 +   G   
Sbjct: 135 PLDPEITIPADAISVSIAADGTVS---VLRQGATEVEEVGRIELAKFVNPAGLRRIGNNL 191

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
             +        ++            G ++  NVN++ E  ++    R Y  N + I+ + 
Sbjct: 192 YIQTTASGEPIIDNPGNQGLGTLLQGYLESSNVNIVEEMVNLIIAQRAYEFNTKGIQAAD 251

Query: 123 DMMTTTLDLLR 133
           +M++   +L R
Sbjct: 252 EMLSQAANLRR 262



 Score = 47.2 bits (110), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 11/62 (17%), Positives = 21/62 (33%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +  +   + SG+  Q   + +IS N+AN  T G       ++       E          
Sbjct: 1  MFRALWTSASGMTAQQTNLDVISHNMANVNTVGYKKMRATFQDLLYQTVEEPGAPTSPTT 60

Query: 64 KK 65
          + 
Sbjct: 61 RS 62


>gi|221636048|ref|YP_002523924.1| flagellar hook protein FlgE [Thermomicrobium roseum DSM 5159]
 gi|221157294|gb|ACM06412.1| flagellar hook protein FlgE [Thermomicrobium roseum DSM 5159]
          Length = 423

 Score = 64.9 bits (156), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 32/85 (37%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +    +   GG             V   D G     ASG ++  NV++  E   M    
Sbjct: 339 FTNPGGLMKVGGNAYLPTVNSGEPIVGPADSGGRGKIASGYLEMSNVDLAQEFTSMIMAQ 398

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R + AN + I  S +++   ++L R
Sbjct: 399 RGFQANSRVITTSDEVLQELVNLRR 423



 Score = 44.1 bits (102), Expect = 0.006,   Method: Composition-based stats.
 Identities = 15/41 (36%), Positives = 19/41 (46%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          ++ S   A SGL      M +I  NIAN  TTG   G   +
Sbjct: 1  MMRSMFSAISGLRAHQTWMDVIGNNIANVNTTGFKVGRVRF 41


>gi|293395585|ref|ZP_06639868.1| flagellar basal-body rod protein FlgG [Serratia odorifera DSM 4582]
 gi|291421904|gb|EFE95150.1| flagellar basal-body rod protein FlgG [Serratia odorifera DSM 4582]
          Length = 260

 Score = 64.9 bits (156), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 21/126 (16%), Positives = 38/126 (30%), Gaps = 3/126 (2%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
            +  I  + L++   R  I+S      +              T   +  +   G    ++
Sbjct: 138 PAITIPANALSITVGRDGIVS---VTQQGQTAAQQVGQLTLTTFINDSGLESVGENLYQE 194

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
                +                G V+  NVNV  E  +M +  R Y  N + +  S  M+
Sbjct: 195 TESSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAYEINSKAVSTSDQML 254

Query: 126 TTTLDL 131
                L
Sbjct: 255 QKLTQL 260



 Score = 44.1 bits (102), Expect = 0.006,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 21/61 (34%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I S  IA +GL  Q   M +I+ N+AN  T G       +                 + 
Sbjct: 1  MIPSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTMRQPGAQSSEQT 60

Query: 64 K 64
           
Sbjct: 61 T 61


>gi|289804043|ref|ZP_06534672.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Typhi str. AG3]
          Length = 179

 Score = 64.9 bits (156), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 19/126 (15%), Positives = 37/126 (29%), Gaps = 3/126 (2%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
            +  I  + L++   R  ++S      +              T   +  +   G     +
Sbjct: 57  PAITIPANALSITIGRDGVVS---VTQQGQAAPVQVGQLNLTTFMNDTGLESIGENLYIE 113

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
                +                G V+  NVNV  E  +M +  R Y  N + +  +  M+
Sbjct: 114 TQSSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAYEINSKAVSTTDQML 173

Query: 126 TTTLDL 131
                L
Sbjct: 174 QKLTQL 179


>gi|307721135|ref|YP_003892275.1| flagellar basal-body rod protein FlgG [Sulfurimonas autotrophica
           DSM 16294]
 gi|306979228|gb|ADN09263.1| flagellar basal-body rod protein FlgG [Sulfurimonas autotrophica
           DSM 16294]
          Length = 262

 Score = 64.9 bits (156), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 30/85 (35%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +H  G     +                      G V+  NV ++VE  D+    
Sbjct: 178 FINPAGLHAMGDNLYIETDSSGQPVEGIPGVDGLGTIRQGFVELSNVELVVELTDLITGQ 237

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R Y AN + I  S +M+ TT +L R
Sbjct: 238 RAYDANSKIITTSDEMLQTTNNLKR 262



 Score = 36.8 bits (83), Expect = 0.97,   Method: Composition-based stats.
 Identities = 12/62 (19%), Positives = 22/62 (35%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ S + A++G+     ++   + NIAN  T G       +        E    S     
Sbjct: 1  MMQSLYTASTGMLGMQTQIDTTANNIANVNTIGFKKSRAEFADLMYHVMEYAGTSTSDTT 60

Query: 64 KK 65
          K 
Sbjct: 61 KS 62


>gi|327398495|ref|YP_004339364.1| flagellar hook-basal body protein [Hippea maritima DSM 10411]
 gi|327181124|gb|AEA33305.1| flagellar hook-basal body protein [Hippea maritima DSM 10411]
          Length = 719

 Score = 64.9 bits (156), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 33/89 (37%)

Query: 45  RRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
                +  E +   GG    +     +  +     G     A   ++  NV++  E  +M
Sbjct: 631 AMAKFANNEGLMKEGGSMYSETANSGAPLIGTAGTGGRGTFAPSHLEMSNVDLAEEFTNM 690

Query: 105 RETNRLYMANLQTIKQSHDMMTTTLDLLR 133
               R + AN ++I  S  M+   L+L R
Sbjct: 691 IIYERAFQANSRSITTSDQMIQELLNLKR 719


>gi|306820920|ref|ZP_07454540.1| flagellar basal-body rod protein FlgG [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
 gi|304551034|gb|EFM39005.1| flagellar basal-body rod protein FlgG [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
          Length = 270

 Score = 64.9 bits (156), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 17/88 (19%), Positives = 31/88 (35%)

Query: 46  RKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
           +           + G        +    V+E +         G ++  NV ++ E   M 
Sbjct: 183 KTVTFVNPEGLKAVGSNFYVPTDNSGEPVQEENETRESKIYQGYLEMSNVQLVDEMVRMI 242

Query: 106 ETNRLYMANLQTIKQSHDMMTTTLDLLR 133
              R Y  N +T++ + DM+ T   L R
Sbjct: 243 TAQRAYEINSKTVQTADDMLNTINQLKR 270



 Score = 41.4 bits (95), Expect = 0.042,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          + +   A SG+  Q   + +IS NI+N  TTG       ++
Sbjct: 1  MRALWTAASGMKAQQLNVDVISNNISNVNTTGFKAQKTEFK 41


>gi|254458078|ref|ZP_05071505.1| flagellar basal-body rod protein FlgG [Campylobacterales bacterium
           GD 1]
 gi|207085471|gb|EDZ62756.1| flagellar basal-body rod protein FlgG [Campylobacterales bacterium
           GD 1]
          Length = 262

 Score = 64.9 bits (156), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 30/85 (35%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +H  G     +                      G V+  NV ++VE  D+    
Sbjct: 178 FINPAGLHSRGDNLYLETDSSGQPVEGTPGVDGLGVLRQGFVELSNVELVVELTDLITGQ 237

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R Y +N + I  S +M+ TT +L R
Sbjct: 238 RAYDSNSKVITTSDEMLQTTNNLKR 262



 Score = 36.8 bits (83), Expect = 0.92,   Method: Composition-based stats.
 Identities = 19/108 (17%), Positives = 33/108 (30%), Gaps = 6/108 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           ++ S + A++G+     ++   + NIAN  T G         R   S       S     
Sbjct: 1   MMQSLYTASTGMLGMQTQIDTTANNIANVNTIGFK-----KSRAEFSDLMYKVMSYAGTA 55

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
                   T +E      P A      +   +       D+  T R +
Sbjct: 56  TSDVTKSPTGIEVGLGVRPTAINKIFSEGS-LKQTDNQLDVAITGRGF 102


>gi|315453484|ref|YP_004073754.1| flagellar basal-body rod protein [Helicobacter felis ATCC 49179]
 gi|315132536|emb|CBY83164.1| flagellar basal-body rod protein [Helicobacter felis ATCC 49179]
          Length = 262

 Score = 64.5 bits (155), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 28/69 (40%), Gaps = 2/69 (2%)

Query: 67  GVDQSTFVEEFDPGHPV--ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
               S      +P          G ++  NV ++ E  D+    R Y AN +TI+ + +M
Sbjct: 194 VTSASGPAIVGNPNGDGYGQLRQGFLELSNVRLVEEMTDLITAQRAYEANSKTIQTADNM 253

Query: 125 MTTTLDLLR 133
           + T   L R
Sbjct: 254 LQTVNSLKR 262



 Score = 36.4 bits (82), Expect = 1.4,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 18/41 (43%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          ++ S + A +G+  Q   +   S NIAN  T G       +
Sbjct: 1  MLRSLYSATTGMLGQQTHIDTTSNNIANVNTVGFKKQRADF 41


>gi|134300225|ref|YP_001113721.1| hypothetical protein Dred_2386 [Desulfotomaculum reducens MI-1]
 gi|134052925|gb|ABO50896.1| protein of unknown function DUF1078 domain protein
           [Desulfotomaculum reducens MI-1]
          Length = 266

 Score = 64.5 bits (155), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 19/100 (19%), Positives = 31/100 (31%)

Query: 34  TTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
             G T         T      +   G                        +  SG ++  
Sbjct: 167 EDGKTEEVGNIELFTFPAPSGLVSKGSNLYMATEASGEETSGVPGEDGIGSIYSGYLERS 226

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           NV++  E   M E  R Y AN +TI+ + +M     +L +
Sbjct: 227 NVDLATEMIGMIEAQRAYAANSRTIQTADEMWDRANNLRK 266



 Score = 41.4 bits (95), Expect = 0.040,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 16/41 (39%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I +     SG+     ++  I  NIAN  TT        +
Sbjct: 2  IIKTLSSGASGMRAHQLKLDTIGNNIANINTTAFKKNRTDF 42


>gi|74317650|ref|YP_315390.1| flagellar basal body rod protein FlgG [Thiobacillus denitrificans
           ATCC 25259]
 gi|74057145|gb|AAZ97585.1| flagellar basal body rod protein FlgG [Thiobacillus denitrificans
           ATCC 25259]
          Length = 260

 Score = 64.5 bits (155), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 20/126 (15%), Positives = 35/126 (27%), Gaps = 3/126 (2%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
            +  I      +   R   +S        +         +         +   G     +
Sbjct: 138 PAITIPADTQTLTIGRDGTVS---VTQPGSATPVTIGTLQLAMFVNPAGLQSLGENLYAE 194

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
                +                G V+  NVNV+ E  +M +T R Y  N + I+ S  M+
Sbjct: 195 TAASGTPSSSAPGSNGAGLLNQGYVETSNVNVVEELVNMIQTQRAYEINSKAIQTSDQML 254

Query: 126 TTTLDL 131
                L
Sbjct: 255 QRLTQL 260



 Score = 42.9 bits (99), Expect = 0.015,   Method: Composition-based stats.
 Identities = 15/41 (36%), Positives = 22/41 (53%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I S  IA +GL  Q  +M +IS N+AN  T+G       +
Sbjct: 1  MIRSLWIAKTGLDAQQTQMDVISNNLANVSTSGFKRARAVF 41


>gi|302872712|ref|YP_003841348.1| flagellar basal-body rod protein FlgG [Caldicellulosiruptor
           obsidiansis OB47]
 gi|302575571|gb|ADL43362.1| flagellar basal-body rod protein FlgG [Caldicellulosiruptor
           obsidiansis OB47]
          Length = 267

 Score = 64.5 bits (155), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 30/75 (40%), Gaps = 1/75 (1%)

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVAN-ASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
           G  +  +       V E +     +    G ++  NV V+ E   +    R Y  N + I
Sbjct: 193 GKNLYNVSAASGEPVSEEEMEGQKSRILQGFLEMSNVQVVDEMVKLIIAQRAYEINSKAI 252

Query: 119 KQSHDMMTTTLDLLR 133
           + + DM++   +L R
Sbjct: 253 QTADDMLSMANNLKR 267



 Score = 41.4 bits (95), Expect = 0.047,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 21/59 (35%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
          ++ + + A  G+  Q   + IIS N+AN  TT        ++              G  
Sbjct: 1  MMRALYSAALGMKAQQTNVDIISNNLANVNTTAFKKDKAEFKDLLYETLSRADVVAGDG 59


>gi|146311248|ref|YP_001176322.1| flagellar basal body rod protein FlgG [Enterobacter sp. 638]
 gi|145318124|gb|ABP60271.1| flagellar basal-body rod protein FlgG [Enterobacter sp. 638]
          Length = 260

 Score = 64.5 bits (155), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 19/126 (15%), Positives = 37/126 (29%), Gaps = 3/126 (2%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
            +  I  + L++   R  ++S      +              T   +  +   G     +
Sbjct: 138 PAITIPANSLSITIGRDGVVS---VTQQGQAAPVQVGQLNLTTFMNDTGLESIGENLYTE 194

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
                +                G V+  NVNV  E  +M +  R Y  N + +  +  M+
Sbjct: 195 TQSSGAPNESTPGLNGSGLLYQGYVETSNVNVAEELVNMIQVQRAYEINSKAVSTTDQML 254

Query: 126 TTTLDL 131
                L
Sbjct: 255 QKLTQL 260



 Score = 44.5 bits (103), Expect = 0.005,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 21/41 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I+S  IA +GL  Q   M +I+ N+AN  T G       +
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVF 41


>gi|118581849|ref|YP_903099.1| flagellar basal body rod protein FlgG [Pelobacter propionicus DSM
           2379]
 gi|118504559|gb|ABL01042.1| flagellar basal-body rod protein FlgG [Pelobacter propionicus DSM
           2379]
          Length = 262

 Score = 64.5 bits (155), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 23/132 (17%), Positives = 44/132 (33%), Gaps = 3/132 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
           D L+    I N+   +       +S   A              +    +    +   G  
Sbjct: 134 DPLLPEIVIPNNTTKIDIGSDGTVS---ATQSGQTTPTTVGTIQLALFANPAGLFSMGKN 190

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
             K+     +              A G+++  NV+V  E  +M    R Y AN + ++ +
Sbjct: 191 LYKETDSSGTPTTGTPGQDGLGTVAQGMLEMSNVSVAEEMVNMIIGQRAYEANSKAVQAA 250

Query: 122 HDMMTTTLDLLR 133
            +M+ T  +L R
Sbjct: 251 DEMLQTANNLRR 262



 Score = 42.2 bits (97), Expect = 0.025,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 20/41 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          ++ +   A SG+  Q   + +++ N+AN  TTG       +
Sbjct: 1  MMRALWTAASGMQAQQKNIDVVAHNLANVNTTGFKRSRADF 41


>gi|103488389|ref|YP_617950.1| flagellar basal body rod protein FlgG [Sphingopyxis alaskensis
           RB2256]
 gi|98978466|gb|ABF54617.1| Flagellar basal-body rod FlgG [Sphingopyxis alaskensis RB2256]
          Length = 261

 Score = 64.5 bits (155), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 39/126 (30%), Gaps = 4/126 (3%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            L  +  I      V       +S   A     G             S    +   GG  
Sbjct: 136 PLTPAIQIPEDAGNVSIGLDGTVSATAA----DGTALELGRIEIARFSNPAGLQAIGGNM 191

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
           + +     +  V             G+++  NVNV+ E  DM ET R Y  N + I  + 
Sbjct: 192 LVETQASGAPLVGGAGEEGRGTLRGGMLEGSNVNVVEELVDMIETQRAYEVNSKMISATD 251

Query: 123 DMMTTT 128
           +MM   
Sbjct: 252 EMMKNA 257



 Score = 43.3 bits (100), Expect = 0.012,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 26/60 (43%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          + + H+A +GL  QS RMQ+I+ N+AN  TTG       +   +               +
Sbjct: 3  LGALHVARTGLDAQSFRMQVIANNLANVNTTGFKRDRASFETLSYQLMTQAGAPSTAENR 62


>gi|268680164|ref|YP_003304595.1| flagellar basal-body rod protein FlgG [Sulfurospirillum deleyianum
           DSM 6946]
 gi|268618195|gb|ACZ12560.1| flagellar basal-body rod protein FlgG [Sulfurospirillum deleyianum
           DSM 6946]
          Length = 262

 Score = 64.5 bits (155), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 27/85 (31%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +H  G              V E             V+  NV ++ E  D+    
Sbjct: 178 FINPAGLHSLGDNNYINTSASGDPIVSEPGLNGLGQTRQQFVEMSNVQLVEEMTDLITGQ 237

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R Y AN + I  S +M+ T   L +
Sbjct: 238 RAYEANSKAITTSDEMLQTVNALKQ 262



 Score = 41.0 bits (94), Expect = 0.050,   Method: Composition-based stats.
 Identities = 13/91 (14%), Positives = 23/91 (25%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I S + A +G+  Q  ++   S NI+N  T G       +             S     
Sbjct: 1  MIRSLYTAATGMIAQQTQIDTTSNNISNVNTIGYKKQRAEFADLMYQTMTYAGTSTSATS 60

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIVKYPN 94
                +                    +  N
Sbjct: 61 TSPTGIEVGLGVRPTAIAKQFTQGNFKETGN 91


>gi|83647171|ref|YP_435606.1| flagellar basal body rod protein FlgG [Hahella chejuensis KCTC
           2396]
 gi|83635214|gb|ABC31181.1| Flagellar basal body rod protein [Hahella chejuensis KCTC 2396]
          Length = 261

 Score = 64.5 bits (155), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 17/124 (13%), Positives = 36/124 (29%), Gaps = 3/124 (2%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            L     + +  L +  +   ++S  +A    T                   +   G   
Sbjct: 135 PLEPGITVPDGALHLTISTDGVVSVTVA---GTATPTQVGNINTVDFINPAGLEAIGNNL 191

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
            ++                      G+V+  NV ++ E  +M  T R Y  N + +  + 
Sbjct: 192 FRETAASGDPQEGTPGLAGLGTVEQGMVETSNVEIVEEMVNMITTQRAYEMNAKVVTTAD 251

Query: 123 DMMT 126
            M+ 
Sbjct: 252 QMLQ 255



 Score = 41.8 bits (96), Expect = 0.035,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 22/42 (52%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          +  +  ++ +GLA Q   ++ IS N+AN  TTG       ++
Sbjct: 1  MHGALWVSKTGLAAQDTALKTISNNLANVNTTGFKRDRAVFQ 42


>gi|205353083|ref|YP_002226884.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|205272864|emb|CAR37793.1| flagellar basal-body rod protein FlgG (distal rod protein)
           [Salmonella enterica subsp. enterica serovar Gallinarum
           str. 287/91]
 gi|326628163|gb|EGE34506.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 9]
          Length = 260

 Score = 64.5 bits (155), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 19/126 (15%), Positives = 37/126 (29%), Gaps = 3/126 (2%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
            +  I  + L++   R  ++S      +              T   +  +   G     +
Sbjct: 138 PAITIPANALSITIGRDGVVS---VTQQGQAAPVQVGQLNLTTFMNDTGLESIGENLYIE 194

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
                +                G V+  NVNV  E  +M +  R Y  N + +  +  M+
Sbjct: 195 TQSSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAYEINCKAVSTTDQML 254

Query: 126 TTTLDL 131
                L
Sbjct: 255 QKLTQL 260



 Score = 44.9 bits (104), Expect = 0.004,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 21/41 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I+S  IA +GL  Q   M +I+ N+AN  T G       +
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVF 41


>gi|196247630|ref|ZP_03146332.1| protein of unknown function DUF1078 domain protein [Geobacillus sp.
           G11MC16]
 gi|196212414|gb|EDY07171.1| protein of unknown function DUF1078 domain protein [Geobacillus sp.
           G11MC16]
          Length = 264

 Score = 64.5 bits (155), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 16/106 (15%), Positives = 38/106 (35%)

Query: 28  NIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANAS 87
           N+     TG+       +    +  + +   G    ++        +            S
Sbjct: 159 NVTIVDDTGNLQLVGTIQLAKFANPDGLEKEGNNLFRETVNSGDPQIGVPGANGTGKLVS 218

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  NV++  E  +M    R + AN + I  S +++   ++L +
Sbjct: 219 GALEMSNVDLAEEFTEMIVAQRGFQANTRIITTSDEILQELVNLKK 264



 Score = 34.1 bits (76), Expect = 7.1,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 18/42 (42%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S +     +     ++ +I  NIAN  T G   G   ++
Sbjct: 1  MLRSMYSGIGAMRNFQTKLDVIGNNIANVNTYGFKKGRTIFQ 42


>gi|269965426|ref|ZP_06179545.1| Flagellar basal-body rod protein flgC [Vibrio alginolyticus 40B]
 gi|269829905|gb|EEZ84135.1| Flagellar basal-body rod protein flgC [Vibrio alginolyticus 40B]
          Length = 70

 Score = 64.5 bits (155), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 24/69 (34%), Positives = 35/69 (50%)

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
            I         E++P HP+AN  G +  PNVNV+ E A+M   +R Y  N+Q    S  M
Sbjct: 2   GIVESDKPLSAEYNPDHPLANEEGYIYKPNVNVMEEMANMISASRAYQTNVQVADSSKQM 61

Query: 125 MTTTLDLLR 133
           +  TL + +
Sbjct: 62  LLRTLQMGQ 70


>gi|332981440|ref|YP_004462881.1| flagellar hook-basal body protein [Mahella australiensis 50-1 BON]
 gi|332699118|gb|AEE96059.1| flagellar hook-basal body protein [Mahella australiensis 50-1 BON]
          Length = 265

 Score = 64.5 bits (155), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 21/107 (19%), Positives = 36/107 (33%), Gaps = 2/107 (1%)

Query: 29  IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVAN--A 86
           I+  +  G     D            +   G    ++             PG        
Sbjct: 159 ISGIQADGTVDTLDIVGLAKFVNPGGLEKIGQNMYRETISSGPPATGIVQPGQDGTGYLT 218

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NV++  E  DM  T R + AN + I  S +M+   ++L R
Sbjct: 219 PGALEMSNVDLSRELTDMIITQRGFQANSRVITTSDEMLQELVNLKR 265



 Score = 44.1 bits (102), Expect = 0.006,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 27/67 (40%), Gaps = 3/67 (4%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY---RRKTISFEEVMHGSGG 60
          ++ S     SGL     RM +I  NIAN  T G       +     +TI      +  GG
Sbjct: 1  MMRSMFSGVSGLRAHQTRMDVIGNNIANVNTVGFKSSRVTFQDVFNQTIKTGSAPNVLGG 60

Query: 61 VRVKKIG 67
             ++IG
Sbjct: 61 TNPQQIG 67


>gi|213026919|ref|ZP_03341366.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Typhi str. 404ty]
          Length = 149

 Score = 64.5 bits (155), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 19/126 (15%), Positives = 37/126 (29%), Gaps = 3/126 (2%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
            +  I  + L++   R  ++S      +              T   +  +   G     +
Sbjct: 27  PAITIPANALSITIGRDGVVS---VTQQGQAAPVQVGQLNLTTFMNDTGLESIGENLYIE 83

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
                +                G V+  NVNV  E  +M +  R Y  N + +  +  M+
Sbjct: 84  TQSSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAYEINSKAVSTTDQML 143

Query: 126 TTTLDL 131
                L
Sbjct: 144 QKLTQL 149


>gi|146295641|ref|YP_001179412.1| hypothetical protein Csac_0595 [Caldicellulosiruptor
           saccharolyticus DSM 8903]
 gi|145409217|gb|ABP66221.1| protein of unknown function DUF1078 domain protein
           [Caldicellulosiruptor saccharolyticus DSM 8903]
          Length = 267

 Score = 64.5 bits (155), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 19/102 (18%), Positives = 35/102 (34%), Gaps = 1/102 (0%)

Query: 33  RTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVAN-ASGIVK 91
              G    S    +           + G  +  +       V E +   P +    G ++
Sbjct: 166 DAEGQIQDSGFKIKIVRFINPQGLLAEGKNLYNVSAASGDPVSEEEIEGPKSRILQGFLE 225

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             NV V+ E   +    R Y  N + I+ + DM++   +L R
Sbjct: 226 MSNVQVVDEMVKLIIAQRAYEINSKAIQTADDMLSMANNLKR 267



 Score = 41.8 bits (96), Expect = 0.031,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 21/59 (35%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
          ++ + + A  G+  Q   + IIS N+AN  TT        ++              G  
Sbjct: 1  MMRALYSAALGMKAQQTNVDIISNNLANVNTTAFKKDKAEFKDLLYETLSRADVIAGDG 59


>gi|303248256|ref|ZP_07334519.1| protein of unknown function DUF1078 domain protein [Desulfovibrio
           fructosovorans JJ]
 gi|302490394|gb|EFL50305.1| protein of unknown function DUF1078 domain protein [Desulfovibrio
           fructosovorans JJ]
          Length = 128

 Score = 64.5 bits (155), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 29/128 (22%), Positives = 52/128 (40%), Gaps = 2/128 (1%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +  +   A S L   S  M + + N+AN  T G        R  T    +    S  V  
Sbjct: 1   MTDAISAAQSALGAMSTSMAVTANNVANVNTDGYKSQDA--RLSTGPDGQGTQVSSIVED 58

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
              G  ++  V   +          +V+  NV+++ +  +M + +R + AN+  I+ + +
Sbjct: 59  TSAGALRAETVAAENQAGAYEPQMDMVEMSNVDLVRQNVNMIQDSRAFEANVAVIRTADE 118

Query: 124 MMTTTLDL 131
           M  T LDL
Sbjct: 119 MAGTLLDL 126


>gi|317121822|ref|YP_004101825.1| flagellar hook-basal body protein [Thermaerobacter marianensis DSM
           12885]
 gi|315591802|gb|ADU51098.1| flagellar hook-basal body protein [Thermaerobacter marianensis DSM
           12885]
          Length = 406

 Score = 64.5 bits (155), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 17/60 (28%), Positives = 28/60 (46%)

Query: 74  VEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +     G   A   G ++  NV++  E  DM  T R + AN + I  S +M+   ++L R
Sbjct: 347 IGVAGTGGRGALTPGALEMSNVDLSREFVDMIVTQRGFQANSRVITTSDEMLQELVNLKR 406



 Score = 39.5 bits (90), Expect = 0.16,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 20/62 (32%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ S +   SGL     RM +I  NIAN  T G       ++              G   
Sbjct: 1  MMRSLYAGISGLQNHQLRMDVIGNNIANVNTVGFKSSRVTFKELFNQTLRGAAAPAGPTR 60

Query: 64 KK 65
            
Sbjct: 61 GG 62


>gi|322832566|ref|YP_004212593.1| flagellar basal-body rod protein FlgG [Rahnella sp. Y9602]
 gi|321167767|gb|ADW73466.1| flagellar basal-body rod protein FlgG [Rahnella sp. Y9602]
          Length = 260

 Score = 64.5 bits (155), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 22/127 (17%), Positives = 40/127 (31%), Gaps = 3/127 (2%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           I +  +  + L++   R  I+S      +              T      +   G    +
Sbjct: 137 IPAITVPANALSMTVGRDGIVS---VTTQGQTAAQQVGQLTLSTFINNSGLESLGENLYQ 193

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           +     +                G V+  NVNV  E  +M +T R Y  N + +  S +M
Sbjct: 194 ETQSSGAPTESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQTQRAYEINSKAVSTSDEM 253

Query: 125 MTTTLDL 131
           +     L
Sbjct: 254 LQKLSQL 260



 Score = 42.9 bits (99), Expect = 0.013,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 21/41 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I S +IA +GL  Q   M +I+ N+AN  T G       +
Sbjct: 1  MIPSLYIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVF 41


>gi|71906393|ref|YP_283980.1| flagellar basal body rod protein FlgG [Dechloromonas aromatica RCB]
 gi|71846014|gb|AAZ45510.1| Protein of unknown function DUF1078 [Dechloromonas aromatica RCB]
          Length = 260

 Score = 64.5 bits (155), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 23/129 (17%), Positives = 39/129 (30%), Gaps = 3/129 (2%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            L  +  I ++ L+V       +S        +  T      +  T      +  +G   
Sbjct: 135 PLQPNITIPSNALSVSVGTDGTVS---VTQSGSAATTQIGSIQLATFINPAGLQSAGQNL 191

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
             +     +                G V+  NVNV  E   M +T R Y  N + +  S 
Sbjct: 192 FLETAASGTPTPNTPGSNGAGIVNQGYVETSNVNVAEELVTMIQTQRAYELNSKVVSTSD 251

Query: 123 DMMTTTLDL 131
            M+     L
Sbjct: 252 AMLGRLTQL 260



 Score = 42.9 bits (99), Expect = 0.014,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 21/41 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I S  IA +GL  Q  ++ +IS N+AN  T G       +
Sbjct: 1  MIRSLWIARTGLDAQQTQLDVISNNLANVSTNGFKRSRAVF 41


>gi|253996317|ref|YP_003048381.1| flagellar basal-body rod protein FlgG [Methylotenera mobilis JLW8]
 gi|253982996|gb|ACT47854.1| flagellar basal-body rod protein FlgG [Methylotenera mobilis JLW8]
          Length = 260

 Score = 64.1 bits (154), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 21/124 (16%), Positives = 40/124 (32%), Gaps = 3/124 (2%)

Query: 8   AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
             + ++   +   R   +S  +A    +         +  T      + G+G     +  
Sbjct: 140 ITVPSNAQTLTVGRDGTVSVTLA---GSTAVTQIGQLQLATFINPAGLQGNGENLYVETA 196

Query: 68  VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
              +                G V+  NVNV+ E  +M +T R Y  N + I  S  M+  
Sbjct: 197 ASGTANANTPGTNGAGLLTQGYVETSNVNVVEELVNMIQTQRAYEINSKAITTSDQMLQK 256

Query: 128 TLDL 131
              +
Sbjct: 257 LTQM 260



 Score = 43.3 bits (100), Expect = 0.011,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 21/41 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I S  I+ +GL  Q  +M +IS N+AN  T G       +
Sbjct: 1  MIRSLWISKTGLDAQQTQMDVISNNLANVSTNGFKRSRAVF 41


>gi|15616948|ref|NP_240161.1| flagellar basal body rod protein FlgG [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|219681701|ref|YP_002468087.1| flagellar basal-body rod protein FlgG [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
 gi|219682256|ref|YP_002468640.1| flagellar basal-body rod protein FlgG [Buchnera aphidicola str.
           Tuc7 (Acyrthosiphon pisum)]
 gi|257471397|ref|ZP_05635396.1| flagellar basal body rod protein FlgG [Buchnera aphidicola str.
           LSR1 (Acyrthosiphon pisum)]
 gi|11386809|sp|P57424|FLGG_BUCAI RecName: Full=Flagellar basal-body rod protein flgG; AltName:
           Full=Distal rod protein
 gi|25298916|pir||G84969 flagellar basal-body rod protein flgG [imported] - Buchnera sp.
           (strain APS)
 gi|10039013|dbj|BAB13047.1| flagellar basal-body rod protein flgG [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|219621989|gb|ACL30145.1| flagellar basal-body rod protein FlgG [Buchnera aphidicola str.
           Tuc7 (Acyrthosiphon pisum)]
 gi|219624544|gb|ACL30699.1| flagellar basal-body rod protein FlgG [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
 gi|311086079|gb|ADP66161.1| flagellar basal body rod protein FlgG [Buchnera aphidicola str.
           LL01 (Acyrthosiphon pisum)]
 gi|311086651|gb|ADP66732.1| flagellar basal body rod protein FlgG [Buchnera aphidicola str.
           TLW03 (Acyrthosiphon pisum)]
 gi|311087237|gb|ADP67317.1| flagellar basal body rod protein FlgG [Buchnera aphidicola str.
           JF99 (Acyrthosiphon pisum)]
 gi|311087756|gb|ADP67835.1| flagellar basal body rod protein FlgG [Buchnera aphidicola str.
           JF98 (Acyrthosiphon pisum)]
          Length = 260

 Score = 64.1 bits (154), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 24/129 (18%), Positives = 40/129 (31%), Gaps = 3/129 (2%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            +I   +I ++   +  AR  +IS      +                     +   G   
Sbjct: 135 PIIPEINIPSNSTNINIARDGVIS---VVVQGQTQPVLLGQLNLINFVNNSGLESLGENL 191

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
            ++     S                G V+  NVNV  E  +M +T R Y  N ++I  S 
Sbjct: 192 YQETQASGSPIETTPGLNGTGVLYQGYVETSNVNVAEELVNMIQTQRAYEINSKSISTSD 251

Query: 123 DMMTTTLDL 131
            M+     L
Sbjct: 252 QMLQKLSQL 260



 Score = 43.3 bits (100), Expect = 0.012,   Method: Composition-based stats.
 Identities = 15/41 (36%), Positives = 20/41 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I S  I+ +GL  Q   M IIS N+AN  T G       +
Sbjct: 1  MIPSLWISKTGLDAQQINMNIISNNLANVSTNGFKRSRAVF 41


>gi|224370779|ref|YP_002604943.1| FlgE [Desulfobacterium autotrophicum HRM2]
 gi|223693496|gb|ACN16779.1| FlgE [Desulfobacterium autotrophicum HRM2]
          Length = 901

 Score = 64.1 bits (154), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 31/85 (36%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                  +  SGG    +     S    +         +   ++  NV++  E   M  T
Sbjct: 817 KFLNNNGLSNSGGNLFSETRDSGSAITNKPGENGLGTISPNSLEMSNVDISEEFVKMITT 876

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLL 132
            R + AN +TI    +MM T +++ 
Sbjct: 877 QRGFQANSKTITTVDEMMQTVINMK 901


>gi|291280520|ref|YP_003497355.1| flagellar basal-body rod protein FlgG [Deferribacter desulfuricans
           SSM1]
 gi|290755222|dbj|BAI81599.1| flagellar basal-body rod protein FlgG [Deferribacter desulfuricans
           SSM1]
          Length = 262

 Score = 64.1 bits (154), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 16/86 (18%), Positives = 28/86 (32%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                  +   G     +                    A GI++  NVNV+ E  ++   
Sbjct: 177 KFINPSGLRSIGKNIYLQTAASGEPTTGIPGEDGFGTLAQGILEMSNVNVVEEMVNLITG 236

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y  N + I+   +M+    +L R
Sbjct: 237 QRAYEINSKAIQTGDEMLQIVNNLKR 262



 Score = 42.6 bits (98), Expect = 0.017,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 25/63 (39%), Gaps = 3/63 (4%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ +   A SG+  Q   +  IS N+AN  T G       +        + +  +GGV  
Sbjct: 1  MLRTLWTAASGMTTQQINIDNISNNLANVNTAGFKKSRVNF---EDLLYQELKPAGGVTA 57

Query: 64 KKI 66
            I
Sbjct: 58 AGI 60


>gi|163782718|ref|ZP_02177714.1| flagellar hook basal-body protein FlgG [Hydrogenivirga sp.
           128-5-R1-1]
 gi|159881839|gb|EDP75347.1| flagellar hook basal-body protein FlgG [Hydrogenivirga sp.
           128-5-R1-1]
          Length = 262

 Score = 64.1 bits (154), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 20/127 (15%), Positives = 36/127 (28%), Gaps = 12/127 (9%)

Query: 7   SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
           S  IA  G  V   R    S                            +   G     + 
Sbjct: 148 SIGIAADG-TVTVLRQGATS-----------VEEVGRIELAKFVNPAGLRRVGNNLYIQT 195

Query: 67  GVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
                  ++            G ++  NVN++ E  ++    R Y  N + I  + +M++
Sbjct: 196 DASGEPLIDNPGNQGIGTLLQGYLESSNVNIVEEMVNLIIAQRAYEFNTKGITAADEMLS 255

Query: 127 TTLDLLR 133
              +L R
Sbjct: 256 QAANLRR 262



 Score = 47.9 bits (112), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 19/100 (19%), Positives = 35/100 (35%), Gaps = 6/100 (6%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +  +   + SG+  Q   + +IS N+AN  T G        + +    + +         
Sbjct: 1   MFRALWTSASGMTAQQTNLDVISHNMANVNTIG------FKKMRPTFQDLIYQTVREPGA 54

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETAD 103
                 +S    +   G  +A+  GI    N+N    T D
Sbjct: 55  PTSPTTRSPSGFQIGLGTYIADTYGIFTQGNINQTGNTLD 94


>gi|82544456|ref|YP_408403.1| flagellar basal body rod protein FlgG [Shigella boydii Sb227]
 gi|81245867|gb|ABB66575.1| cell-distal portion of basal-body rod [Shigella boydii Sb227]
 gi|320186975|gb|EFW61688.1| Flagellar basal-body rod protein FlgG [Shigella flexneri CDC
           796-83]
 gi|332094081|gb|EGI99133.1| flagellar basal-body rod protein FlgG [Shigella boydii 3594-74]
          Length = 260

 Score = 64.1 bits (154), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 19/126 (15%), Positives = 36/126 (28%), Gaps = 3/126 (2%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
            +  I  + L++   R  ++S      +              T   +  +   G     +
Sbjct: 138 PAITIPANALSITIGRDGVVS---VTQQGQAAPVQVGQLNLTTFMNDTGLESIGENLYTE 194

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
                +                G V+  NVNV  E  +M +  R Y  N + +  +  M 
Sbjct: 195 TQSSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAYEINSKAVSTTDQMQ 254

Query: 126 TTTLDL 131
                L
Sbjct: 255 QKLTQL 260



 Score = 44.1 bits (102), Expect = 0.007,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 21/41 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I+S  IA +GL  Q   M +I+ N+AN  T G       +
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVF 41


>gi|325295417|ref|YP_004281931.1| fagellar hook-basal body protein [Desulfurobacterium
           thermolithotrophum DSM 11699]
 gi|325065865|gb|ADY73872.1| fagellar hook-basal body protein [Desulfurobacterium
           thermolithotrophum DSM 11699]
          Length = 568

 Score = 64.1 bits (154), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 25/48 (52%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            SG+++  NV++  E  ++    R Y AN + I     ++  T+++ R
Sbjct: 521 RSGMLEMSNVDIASEFINLITAQRAYQANARVITTDDQILQETMNIKR 568



 Score = 39.9 bits (91), Expect = 0.11,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 21/41 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          ++ S + A +GL      + +IS+NIAN  T G    +  +
Sbjct: 1  MLQSFYTAFTGLNADKTWLSVISDNIANVNTVGFKKENAVF 41


>gi|320179221|gb|EFW54179.1| Flagellar basal-body rod protein FlgG [Shigella boydii ATCC 9905]
          Length = 156

 Score = 64.1 bits (154), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 19/126 (15%), Positives = 37/126 (29%), Gaps = 3/126 (2%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
            +  I  + L++   R  ++S      +              T   +  +   G     +
Sbjct: 34  PAITIPANALSITIGRDGVVS---VTQQGQAAPVQVGQLNLTTFMNDTGLESIGENLYTE 90

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
                +                G V+  NVNV  E  +M +  R Y  N + +  +  M+
Sbjct: 91  TQSSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAYEINSKAVSTTDQML 150

Query: 126 TTTLDL 131
                L
Sbjct: 151 QKLTQL 156


>gi|258592560|emb|CBE68869.1| Flagellar basal-body rod protein flgG (Distal rod protein) [NC10
           bacterium 'Dutch sediment']
          Length = 262

 Score = 64.1 bits (154), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 15/131 (11%), Positives = 36/131 (27%), Gaps = 3/131 (2%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            L     I    + +      ++S   A       +                +   G   
Sbjct: 135 ALQPEVSIPAQAMTIHVGSDGVVS---ATIPGQTASQQIGTIELSRFINPAGLQSVGRNL 191

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
                                    G ++  NV V+ E  ++  + R Y A  + ++ + 
Sbjct: 192 SLPTSASGDPTSGAPGTQGLGTIGQGFLELSNVKVVEEMVNLIMSQRAYEAGSKAVQAAD 251

Query: 123 DMMTTTLDLLR 133
           +M+  + ++ R
Sbjct: 252 EMLQVSNNIRR 262



 Score = 38.3 bits (87), Expect = 0.40,   Method: Composition-based stats.
 Identities = 19/131 (14%), Positives = 39/131 (29%), Gaps = 14/131 (10%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTP-----GSDPYRRKTISFEEVMHGS 58
           +I +   A +G+  Q   +  I+ N+AN  TTG            Y+    +      G+
Sbjct: 1   MIRALFSAVAGMQAQQLNLDNIANNLANVNTTGFKRSRLDFQDLFYQTYRPAGASTASGA 60

Query: 59  GGVRVKKIGVDQSTFVEEF-----DPGHPVANASGIVKYPNVNVLVETADMRETNRL--- 110
                 ++G        +      DP         +++      ++         R    
Sbjct: 61  EIPVGIQVGHGSKPIASQRIYIQGDPQQTENPLDLMIEGDGFFQVLRPDGTIAYTRAGSF 120

Query: 111 -YMANLQTIKQ 120
              AN + +  
Sbjct: 121 KRDANGRVVTS 131


>gi|312136039|ref|YP_004003377.1| flagellar basal-body rod protein flgg [Caldicellulosiruptor
           owensensis OL]
 gi|311776090|gb|ADQ05577.1| flagellar basal-body rod protein FlgG [Caldicellulosiruptor
           owensensis OL]
          Length = 267

 Score = 64.1 bits (154), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 30/75 (40%), Gaps = 1/75 (1%)

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVAN-ASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
           G  +  +       V E +     +    G ++  NV V+ E   +    R Y  N + I
Sbjct: 193 GKNLYNVSAASGEPVSEEEMEGQKSRILQGFLEMSNVQVVDEMVKLIIAQRAYEINSKAI 252

Query: 119 KQSHDMMTTTLDLLR 133
           + + DM++   +L R
Sbjct: 253 QTADDMLSIANNLKR 267



 Score = 41.4 bits (95), Expect = 0.045,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 21/59 (35%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
          ++ + + A  G+  Q   + IIS N+AN  TT        ++              G  
Sbjct: 1  MMRALYSAALGMKAQQTNVDIISNNLANVNTTAFKKDKAEFKDLLYETLSRADVVAGDG 59


>gi|94267501|ref|ZP_01290900.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
 gi|93451978|gb|EAT02688.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
          Length = 1069

 Score = 64.1 bits (154), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 15/79 (18%), Positives = 31/79 (39%)

Query: 55   MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
            +H  GG   +      +    +         A   ++  NV++  E   M  T R + AN
Sbjct: 991  LHKVGGNIFRATTQSGAPVTGQPGTNGLGEIAPNSLEQSNVDLGTEFVKMITTQRGFQAN 1050

Query: 115  LQTIKQSHDMMTTTLDLLR 133
             + I  + +M+   +++ R
Sbjct: 1051 SKMITTTDEMLNELINIKR 1069


>gi|119503646|ref|ZP_01625729.1| hypothetical protein MGP2080_03865 [marine gamma proteobacterium
           HTCC2080]
 gi|119460708|gb|EAW41800.1| hypothetical protein MGP2080_03865 [marine gamma proteobacterium
           HTCC2080]
          Length = 261

 Score = 64.1 bits (154), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 22/119 (18%), Positives = 35/119 (29%), Gaps = 3/119 (2%)

Query: 8   AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
             I    L++  A    +S        T         +         +   G     + G
Sbjct: 140 ITIPQDALSISIAPDGTVSVQ---QPGTPQATQVGVIQLTDFVNPSGLQARGENLFLETG 196

Query: 68  VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
              +                G V+  NVNV+ E  +M ET R Y  N + I  +  M+ 
Sbjct: 197 ASGAPLPGNPGLNGLGTLQQGFVEGSNVNVVEELVNMIETQRAYEMNSKAISTADQMLQ 255



 Score = 44.9 bits (104), Expect = 0.003,   Method: Composition-based stats.
 Identities = 16/41 (39%), Positives = 21/41 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  S  IA +GL  Q  +M  IS N+ANA T G   G   +
Sbjct: 1  MSQSLWIAKTGLDAQQTKMATISNNLANAGTNGFKRGRVIF 41


>gi|149908757|ref|ZP_01897418.1| putative flagellar basal-body rod protein [Moritella sp. PE36]
 gi|149808299|gb|EDM68238.1| putative flagellar basal-body rod protein [Moritella sp. PE36]
          Length = 261

 Score = 64.1 bits (154), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 37/124 (29%), Gaps = 3/124 (2%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            L+ S  I     ++       I+  +A                 + +    +   GG  
Sbjct: 135 PLVPSIQIPADATSITIGSDGTITAQLA---GESAPQDVGQITLASFANPAGLVALGGNL 191

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
             + G   +                  ++  NV+V+ E  DM  T R Y  N + +  + 
Sbjct: 192 YTETGSSGAAQEGVAGEASLGQIKQRGLEGSNVSVVEEMVDMISTQRAYEMNAKVVSAAD 251

Query: 123 DMMT 126
            M+ 
Sbjct: 252 KMLQ 255



 Score = 41.8 bits (96), Expect = 0.032,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 22/41 (53%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          + ++   + +GLA Q  +M II+ N+AN  TTG       +
Sbjct: 1  MSSALWTSKTGLAAQDVKMSIIANNLANVNTTGFKKDRVAF 41


>gi|218886713|ref|YP_002436034.1| hypothetical protein DvMF_1618 [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|218757667|gb|ACL08566.1| protein of unknown function DUF1078 domain protein [Desulfovibrio
           vulgaris str. 'Miyazaki F']
          Length = 525

 Score = 64.1 bits (154), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 32/85 (37%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            + ++ +   GG          +  +     G   +     ++  NV+V  E  D+    
Sbjct: 441 FNNDQGLQLEGGNLYSATTESGTANIGRAGQGIYGSIYGEKLEESNVDVSTEMVDLIVMQ 500

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R Y AN + I    +M+ T L L R
Sbjct: 501 RAYQANSKVITTVDEMLQTALGLKR 525


>gi|322380502|ref|ZP_08054691.1| flagellar basal body rod protein FlgG [Helicobacter suis HS5]
 gi|321147069|gb|EFX41780.1| flagellar basal body rod protein FlgG [Helicobacter suis HS5]
          Length = 262

 Score = 64.1 bits (154), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 31/85 (36%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +H  G   +          V   +         G ++  NV ++ E  D+    
Sbjct: 178 FINPAGLHALGDNLLAVTSASGPAIVGNANSDGYGQLRQGFLELSNVRLVEEMTDLITAQ 237

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R Y AN +TI+ + +M+ T   L R
Sbjct: 238 RAYEANSKTIQTADNMLQTVNSLKR 262



 Score = 36.0 bits (81), Expect = 1.9,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 18/41 (43%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          ++ S + A +G+  Q   +   S NIAN  T G       +
Sbjct: 1  MLRSLYSATTGMLGQQTHIDTTSNNIANVNTVGFKRQRADF 41


>gi|239907792|ref|YP_002954533.1| flagellar basal-body rod protein FlgG [Desulfovibrio magneticus
           RS-1]
 gi|239797658|dbj|BAH76647.1| flagellar basal-body rod protein FlgG [Desulfovibrio magneticus
           RS-1]
          Length = 260

 Score = 64.1 bits (154), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 18/104 (17%), Positives = 34/104 (32%), Gaps = 4/104 (3%)

Query: 30  ANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGI 89
           AN+     T         T      +   G           +         +    A G 
Sbjct: 161 ANSAELAATDIPLY----TFINNAGLTAEGRNLYSTSQASGAANEVTPGNQNAGTLAQGF 216

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  NV ++ E   +    R Y AN ++I  +  M+ T +++ R
Sbjct: 217 LEMSNVELVDEMVGLIVGQRAYEANSKSITTADGMLQTAVNIKR 260



 Score = 36.4 bits (82), Expect = 1.5,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 19/41 (46%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          ++ S   A++G+     ++  +S N+AN  T G       +
Sbjct: 1  MMRSLWTASTGMVAMQMQIDTMSNNLANVNTVGFKKSRAEF 41


>gi|225850285|ref|YP_002730519.1| flagellar basal-body rod protein FlgG [Persephonella marina EX-H1]
 gi|225645911|gb|ACO04097.1| flagellar basal-body rod protein FlgG [Persephonella marina EX-H1]
          Length = 266

 Score = 64.1 bits (154), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 17/102 (16%), Positives = 31/102 (30%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           N      T      +         +   G    K           + +       A G +
Sbjct: 164 NEGGQQTTEELTDIKLYKFINPAGLKAIGENLFKYTEASGEPIEGDPNTDGFGKLAQGFL 223

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NVN++ E  ++    R Y  N + I  + +M+ T   L 
Sbjct: 224 EASNVNIVEEMVNLIVAQRAYEINSKGIITADEMLRTVGTLK 265



 Score = 47.6 bits (111), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 19/41 (46%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I +   + SG+  Q   + +IS NIAN  T G       +
Sbjct: 1  MIRALWTSASGMGAQQTNLDVISNNIANVNTVGFKRSRANF 41


>gi|222530298|ref|YP_002574180.1| flagellar basal-body rod protein FlgG [Caldicellulosiruptor bescii
           DSM 6725]
 gi|222457145|gb|ACM61407.1| flagellar basal-body rod protein FlgG [Caldicellulosiruptor bescii
           DSM 6725]
          Length = 267

 Score = 64.1 bits (154), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 17/102 (16%), Positives = 34/102 (33%), Gaps = 1/102 (0%)

Query: 33  RTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVAN-ASGIVK 91
              G    S    +           + G  +  +       + E +     +    G ++
Sbjct: 166 DQDGQIQDSGFKIKIVRFINPQGLLAEGKNLYNVSAASGDPMSEEEMEGQKSRILQGFLE 225

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             NV V+ E   +    R Y  N + I+ + DM++   +L R
Sbjct: 226 MSNVQVVDEMVKLIIAQRAYEINSKAIQTADDMLSMANNLKR 267



 Score = 41.0 bits (94), Expect = 0.053,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 21/59 (35%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
          ++ + + A  G+  Q   + IIS N+AN  TT        ++              G  
Sbjct: 1  MMRALYSAALGMKAQQTNVDIISNNLANVNTTAFKKDKAEFKDLLYETLSRADVVAGDG 59


>gi|109946869|ref|YP_664097.1| flagellar basal body rod protein FlgG [Helicobacter acinonychis
           str. Sheeba]
 gi|109714090|emb|CAJ99098.1| flagellar basal-body rod protein FlgG [Helicobacter acinonychis
           str. Sheeba]
          Length = 262

 Score = 64.1 bits (154), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 29/85 (34%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +H  G              V   D         G ++  NV ++ E  D+    
Sbjct: 178 FVNPAGLHSMGDNLFSITNASGDAIVGNPDSQGLGKLRQGFLELSNVRLVEEMTDLITAQ 237

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R Y AN ++I+ +  M+ T   L R
Sbjct: 238 RAYEANSKSIQTADAMLQTVNSLKR 262



 Score = 40.6 bits (93), Expect = 0.075,   Method: Composition-based stats.
 Identities = 15/74 (20%), Positives = 27/74 (36%), Gaps = 5/74 (6%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSD-----PYRRKTISFEEVMHGS 58
          ++ S + A SG+  Q   +   S NIAN  TTG            Y+    +     + +
Sbjct: 1  MLRSLYSATSGMLAQQTHIDTTSNNIANVNTTGFKKSRADFNDLFYQAMQYAGTNTSNTT 60

Query: 59 GGVRVKKIGVDQST 72
                ++G+    
Sbjct: 61 LSPDGMEVGLGVRP 74


>gi|312621332|ref|YP_004022945.1| flagellar basal-body rod protein flgg [Caldicellulosiruptor
           kronotskyensis 2002]
 gi|312201799|gb|ADQ45126.1| flagellar basal-body rod protein FlgG [Caldicellulosiruptor
           kronotskyensis 2002]
          Length = 267

 Score = 64.1 bits (154), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 18/102 (17%), Positives = 34/102 (33%), Gaps = 1/102 (0%)

Query: 33  RTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVAN-ASGIVK 91
              G    S    +           + G  +  +       V E +     +    G ++
Sbjct: 166 DAEGQVQDSGLKIKIVRFINPQGLLAEGKNLYNVSAASGDPVSEEEMEGQKSRILQGFLE 225

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             NV V+ E   +    R Y  N + I+ + DM++   +L R
Sbjct: 226 MSNVQVVDEMVKLIIAQRAYEINSKAIQTADDMLSMANNLKR 267



 Score = 41.4 bits (95), Expect = 0.046,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 21/59 (35%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
          ++ + + A  G+  Q   + IIS N+AN  TT        ++              G  
Sbjct: 1  MMRALYSAALGMKAQQTNVDIISNNLANVNTTAFKKDKAEFKDLLYETLSRADVVAGDG 59


>gi|261840277|gb|ACY00043.1| flagellar basal body rod protein FlgG [Helicobacter pylori 52]
          Length = 262

 Score = 64.1 bits (154), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 29/85 (34%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +H  G              V   D         G ++  NV ++ E  D+    
Sbjct: 178 FVNPAGLHSMGDNLFSITNASGEAIVGNPDSQGLGKLRQGFLELSNVRLVEEMTDLITAQ 237

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R Y AN ++I+ +  M+ T   L R
Sbjct: 238 RAYEANSKSIQTADAMLQTVNSLKR 262



 Score = 40.6 bits (93), Expect = 0.066,   Method: Composition-based stats.
 Identities = 15/74 (20%), Positives = 27/74 (36%), Gaps = 5/74 (6%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSD-----PYRRKTISFEEVMHGS 58
          ++ S + A SG+  Q   +   S NIAN  TTG            Y+    +     + +
Sbjct: 1  MLRSLYSATSGMLAQQTHIDTTSNNIANVNTTGFKKSRTDFNDLFYQAMQYAGTNTSNTT 60

Query: 59 GGVRVKKIGVDQST 72
                ++G+    
Sbjct: 61 LSPDGMEVGLGVRP 74


>gi|224437199|ref|ZP_03658180.1| flagellar basal body rod protein FlgG [Helicobacter cinaedi CCUG
           18818]
 gi|313143665|ref|ZP_07805858.1| flagellar basal body rod protein FlgG [Helicobacter cinaedi CCUG
           18818]
 gi|313128696|gb|EFR46313.1| flagellar basal body rod protein FlgG [Helicobacter cinaedi CCUG
           18818]
          Length = 262

 Score = 64.1 bits (154), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 27/85 (31%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +H  G                            G ++  NV ++ E  D+    
Sbjct: 178 FINPAGLHSLGDNLFINTNASGDPVAGVPGLDGFGQLRQGFLELSNVKLVEEMTDLITGQ 237

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R Y AN ++I+ +  M+ T   L R
Sbjct: 238 RAYEANSKSIQTADSMLQTVNGLKR 262



 Score = 37.2 bits (84), Expect = 0.75,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 20/42 (47%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S + A +G+  Q  ++   S NIAN  TTG       + 
Sbjct: 1  MMRSLYTATTGMLGQQMQIDNTSNNIANVNTTGYKKQRAEFA 42


>gi|288574697|ref|ZP_06393054.1| flagellar basal-body rod protein FlgG [Dethiosulfovibrio
           peptidovorans DSM 11002]
 gi|288570438|gb|EFC91995.1| flagellar basal-body rod protein FlgG [Dethiosulfovibrio
           peptidovorans DSM 11002]
          Length = 262

 Score = 64.1 bits (154), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 15/86 (17%), Positives = 29/86 (33%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                  +   G    ++        +             GI++  NV V+ E  ++   
Sbjct: 177 RFVNPAGLRAIGRNLFRETAASGDPQIGNPGDDGFPTLQQGILERSNVQVVEEMVNLIVA 236

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y AN +TI+ +  ++     L R
Sbjct: 237 QRAYEANSKTIQTADRLLEVANGLKR 262



 Score = 43.3 bits (100), Expect = 0.011,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 17/42 (40%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          +I S     +G+  Q   + + S N+AN  T G       + 
Sbjct: 1  MIRSLWTGATGMVAQQTNLDVTSNNLANVNTVGYKKVRTNFA 42


>gi|90021853|ref|YP_527680.1| flagellar basal body rod protein FlgG [Saccharophagus degradans
           2-40]
 gi|89951453|gb|ABD81468.1| Flagellar basal-body rod FlgG [Saccharophagus degradans 2-40]
          Length = 261

 Score = 64.1 bits (154), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 27/78 (34%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +   GG    +     +            +   G+++  NV+++ E  +M  T 
Sbjct: 178 FVNPAGLQAIGGNLFLETASSGNPIQGTPGENGLGSIKQGMLENSNVDIVEEMVNMITTQ 237

Query: 109 RLYMANLQTIKQSHDMMT 126
           R Y  N + +  S  M+ 
Sbjct: 238 RAYEMNSKVVSTSDQMLQ 255



 Score = 42.9 bits (99), Expect = 0.015,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 23/41 (56%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          + A+ +++ +GLA Q  R+  I+ N+ANA T G       +
Sbjct: 1  MHAALYVSKTGLAAQDTRLTTIANNLANASTVGFKRDRAVF 41


>gi|308185371|ref|YP_003929504.1| flagellar basal body rod protein FlgG [Helicobacter pylori SJM180]
 gi|308061291|gb|ADO03187.1| flagellar basal body rod protein FlgG [Helicobacter pylori SJM180]
          Length = 262

 Score = 64.1 bits (154), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 29/85 (34%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +H  G              V   D         G ++  NV ++ E  D+    
Sbjct: 178 FVNPAGLHSMGDNLFSITNASGDAIVGNPDSQGLGKLRQGFLELSNVKLVEEMTDLITAQ 237

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R Y AN ++I+ +  M+ T   L R
Sbjct: 238 RAYEANSKSIQTADAMLQTVNSLKR 262



 Score = 40.6 bits (93), Expect = 0.074,   Method: Composition-based stats.
 Identities = 15/74 (20%), Positives = 27/74 (36%), Gaps = 5/74 (6%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSD-----PYRRKTISFEEVMHGS 58
          ++ S + A SG+  Q   +   S NIAN  TTG            Y+    +     + +
Sbjct: 1  MLRSLYSATSGMLAQQTHIDTTSNNIANVNTTGFKKSRADFNDLFYQAMQYAGTNTSNTT 60

Query: 59 GGVRVKKIGVDQST 72
                ++G+    
Sbjct: 61 LSPDGMEVGLGVRP 74


>gi|157371205|ref|YP_001479194.1| flagellar basal body rod protein FlgG [Serratia proteamaculans 568]
 gi|157322969|gb|ABV42066.1| flagellar basal-body rod protein FlgG [Serratia proteamaculans 568]
          Length = 260

 Score = 64.1 bits (154), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 22/126 (17%), Positives = 39/126 (30%), Gaps = 3/126 (2%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
            +  I  + L++   R  I+S      +              T   +  +   G    ++
Sbjct: 138 PAIIIPANALSITVGRDGIVS---VTQQGQTAAQQVGQLTLTTFINDSGLESMGENLYQE 194

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
                +                G V+  NVNV  E  +M +T R Y  N + +  S  M+
Sbjct: 195 TESSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQTQRAYEINSKAVSTSDQML 254

Query: 126 TTTLDL 131
                L
Sbjct: 255 QKLTQL 260



 Score = 43.7 bits (101), Expect = 0.008,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 21/61 (34%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I S  IA +GL  Q   M +I+ N+AN  T G       +                 + 
Sbjct: 1  MIPSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTMRQPGAQSSEQT 60

Query: 64 K 64
           
Sbjct: 61 T 61


>gi|332088746|gb|EGI93858.1| flagellar basal-body rod protein FlgG [Shigella boydii 5216-82]
          Length = 260

 Score = 64.1 bits (154), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 19/126 (15%), Positives = 36/126 (28%), Gaps = 3/126 (2%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
            +  I  + L++   R  ++S      +              T   +  +   G     +
Sbjct: 138 PAITIPANALSITIGRDGVVS---VTQQGQAAPVQVGQLNLTTFMNDTGLESIGENLYTE 194

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
                +                G V   NVNV  E  +M +  R Y  N + +  +  M+
Sbjct: 195 TQSSGAPNESTPGLNGAGLLYQGYVDTSNVNVAEELVNMIQVQRAYEINSKAVSTTDQML 254

Query: 126 TTTLDL 131
                L
Sbjct: 255 QKLTQL 260



 Score = 44.1 bits (102), Expect = 0.007,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 21/41 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I+S  IA +GL  Q   M +I+ N+AN  T G       +
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVF 41


>gi|308068661|ref|YP_003870266.1| flagellar basal-body rod protein flgG (Distal rod protein)
           [Paenibacillus polymyxa E681]
 gi|305857940|gb|ADM69728.1| Flagellar basal-body rod protein flgG (Distal rod protein)
           [Paenibacillus polymyxa E681]
          Length = 272

 Score = 64.1 bits (154), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 24/132 (18%), Positives = 44/132 (33%), Gaps = 8/132 (6%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
           + L  S  I+  G  VQ      +     N    G T   +P   + I            
Sbjct: 149 NDLTTSFSISQDGTIVQQLSDGTVD----NQTKVGVTKVINPEGLEKIGGSLYRATVNSG 204

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
               +    +            A  +G ++  NV++  E  +M    R + AN + I  S
Sbjct: 205 EEGAV----NPMEANSTDAGTGAIVAGQLEMSNVDLTGEFTEMIVAQRGFQANSRIITTS 260

Query: 122 HDMMTTTLDLLR 133
            +++   ++L R
Sbjct: 261 DEVLQEVVNLKR 272



 Score = 36.0 bits (81), Expect = 1.6,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 18/33 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ S +   SG+     ++ +I  NIAN  TTG
Sbjct: 1  MLRSMYSGVSGMKGFQTKLDVIGNNIANVNTTG 33


>gi|27904804|ref|NP_777930.1| flagellar basal-body rod protein FlgG [Buchnera aphidicola str. Bp
           (Baizongia pistaciae)]
 gi|38372207|sp|Q89AH7|FLGG_BUCBP RecName: Full=Flagellar basal-body rod protein flgG; AltName:
           Full=Distal rod protein
 gi|27904202|gb|AAO27035.1| flagellar basal-body rod protein FlgG [Buchnera aphidicola str. Bp
           (Baizongia pistaciae)]
          Length = 260

 Score = 64.1 bits (154), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 12/80 (15%), Positives = 25/80 (31%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
              +  +   G    ++     +  +               V+  NVN+  E  +M +  
Sbjct: 178 FVNDSGLSNIGENLYQETEASGNPSISSPGSHGTGLLYQSYVETSNVNIAEELVNMIQAQ 237

Query: 109 RLYMANLQTIKQSHDMMTTT 128
           R Y  N + I  +  M+   
Sbjct: 238 RAYEINSKVITTADQMLQKL 257



 Score = 45.2 bits (105), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 20/41 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I +  IA +GL  Q   M +I+ N+AN  T G       +
Sbjct: 1  MIPALWIAKTGLDAQQINMNVIANNLANVNTNGFKRSKAIF 41


>gi|304317903|ref|YP_003853048.1| flagellar basal-body rod protein FlgG [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302779405|gb|ADL69964.1| flagellar basal-body rod protein FlgG [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 266

 Score = 64.1 bits (154), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 18/105 (17%), Positives = 33/105 (31%)

Query: 29  IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASG 88
           I+     G                  +   G    +      +    +   G       G
Sbjct: 162 ISVKNPDGTQQDIATLGIYNFQNPNGLLNKGNNLYEATAASGAPGTRDDFQGKMGNVVQG 221

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NV V+ E  +M    R Y  N + I+ + DM++   +L R
Sbjct: 222 FLETSNVQVVNEMVNMIAAQRAYELNSKAIQAADDMLSIANNLRR 266



 Score = 46.0 bits (107), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 23/59 (38%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
          +I +   A SG+  Q   + +IS N+AN  TT        ++       +    + G  
Sbjct: 1  MIRALWSAASGMNAQQLNVDVISNNLANVNTTSFKRDRAEFQDLMYQTLQTEDVNAGQG 59


>gi|108563958|ref|YP_628274.1| flagellar basal body rod protein FlgG [Helicobacter pylori HPAG1]
 gi|207092034|ref|ZP_03239821.1| flagellar basal body rod protein FlgG [Helicobacter pylori
           HPKX_438_AG0C1]
 gi|208435465|ref|YP_002267131.1| flagellar basal-body rod protein [Helicobacter pylori G27]
 gi|210135763|ref|YP_002302202.1| flagellar basal body rod protein FlgG [Helicobacter pylori P12]
 gi|217031740|ref|ZP_03437244.1| hypothetical protein HPB128_155g53 [Helicobacter pylori B128]
 gi|254780116|ref|YP_003058223.1| flagellar basal body rod protein FlgG [Helicobacter pylori B38]
 gi|298737122|ref|YP_003729652.1| flagellar basal-body rod protein FlgG [Helicobacter pylori B8]
 gi|107837731|gb|ABF85600.1| flagellar basal-body rod protein [Helicobacter pylori HPAG1]
 gi|208433394|gb|ACI28265.1| flagellar basal-body rod protein [Helicobacter pylori G27]
 gi|210133731|gb|ACJ08722.1| flagellar basal-body rod protein [Helicobacter pylori P12]
 gi|216946587|gb|EEC25187.1| hypothetical protein HPB128_155g53 [Helicobacter pylori B128]
 gi|254002029|emb|CAX30288.1| Flagellar basal-body rod protein flgG (Distal rod protein)
           [Helicobacter pylori B38]
 gi|298356316|emb|CBI67188.1| flagellar basal-body rod protein FlgG [Helicobacter pylori B8]
 gi|307638271|gb|ADN80721.1| Flagellar basal-body rod protein [Helicobacter pylori 908]
 gi|317010275|gb|ADU80855.1| flagellar basal body rod protein FlgG [Helicobacter pylori India7]
 gi|317011821|gb|ADU85568.1| flagellar basal body rod protein FlgG [Helicobacter pylori
           SouthAfrica7]
 gi|325996863|gb|ADZ52268.1| Flagellar basal-body rod protein [Helicobacter pylori 2018]
 gi|325998456|gb|ADZ50664.1| Flagellar basal-body rod protein [Helicobacter pylori 2017]
          Length = 262

 Score = 64.1 bits (154), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 29/85 (34%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +H  G              V   D         G ++  NV ++ E  D+    
Sbjct: 178 FVNPAGLHSMGDNLFSITNASGDAIVGNPDSQGLGKLRQGFLELSNVRLVEEMTDLITAQ 237

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R Y AN ++I+ +  M+ T   L R
Sbjct: 238 RAYEANSKSIQTADAMLQTVNSLKR 262



 Score = 40.6 bits (93), Expect = 0.078,   Method: Composition-based stats.
 Identities = 15/74 (20%), Positives = 27/74 (36%), Gaps = 5/74 (6%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSD-----PYRRKTISFEEVMHGS 58
          ++ S + A SG+  Q   +   S NIAN  TTG            Y+    +     + +
Sbjct: 1  MLRSLYSATSGMLAQQTHIDTTSNNIANVNTTGFKKSRADFNDLFYQAMQYAGTNTSNTT 60

Query: 59 GGVRVKKIGVDQST 72
                ++G+    
Sbjct: 61 LSPDGMEVGLGVRP 74


>gi|15612557|ref|NP_224210.1| flagellar basal body rod protein FlgG [Helicobacter pylori J99]
 gi|4156115|gb|AAD07066.1| FLAGELLAR BASAL-BODY ROD PROTEIN (DISTAL ROD PROTEIN) [Helicobacter
           pylori J99]
 gi|317015022|gb|ADU82458.1| flagellar basal body rod protein FlgG [Helicobacter pylori
           Gambia94/24]
          Length = 262

 Score = 64.1 bits (154), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 29/85 (34%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +H  G              V   D         G ++  NV ++ E  D+    
Sbjct: 178 FVNPAGLHSMGDNLFSITNASGDAIVGNPDSQGLGKLRQGFLELSNVRLVEEMTDLITAQ 237

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R Y AN ++I+ +  M+ T   L R
Sbjct: 238 RAYEANSKSIQTADAMLQTVNSLKR 262



 Score = 40.6 bits (93), Expect = 0.078,   Method: Composition-based stats.
 Identities = 15/74 (20%), Positives = 27/74 (36%), Gaps = 5/74 (6%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSD-----PYRRKTISFEEVMHGS 58
          ++ S + A SG+  Q   +   S NIAN  TTG            Y+    +     + +
Sbjct: 1  MLRSLYSATSGMLAQQTHIDTTSNNIANVNTTGFKKSRADFNDLFYQAMQYAGTNTSNTT 60

Query: 59 GGVRVKKIGVDQST 72
                ++G+    
Sbjct: 61 LSPDGMEVGLGVRP 74


>gi|309788147|ref|ZP_07682753.1| flagellar basal-body rod protein flgG [Shigella dysenteriae 1617]
 gi|308923999|gb|EFP69500.1| flagellar basal-body rod protein flgG [Shigella dysenteriae 1617]
          Length = 156

 Score = 63.7 bits (153), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 19/126 (15%), Positives = 37/126 (29%), Gaps = 3/126 (2%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
            +  I  + L++   R  ++S      +              T   +  +   G     +
Sbjct: 34  PAITIPANALSITIGRDGVVS---VTQQGQAAPVQVGQLNLTTFMNDTGLESIGENLYTE 90

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
                +                G V+  NVNV  E  +M +  R Y  N + +  +  M+
Sbjct: 91  TQSSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAYEINSKAMSTTDQML 150

Query: 126 TTTLDL 131
                L
Sbjct: 151 QKLTQL 156


>gi|237750021|ref|ZP_04580501.1| flagellar distal rod protein FlgG [Helicobacter bilis ATCC 43879]
 gi|229374432|gb|EEO24823.1| flagellar distal rod protein FlgG [Helicobacter bilis ATCC 43879]
          Length = 262

 Score = 63.7 bits (153), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 23/128 (17%), Positives = 39/128 (30%), Gaps = 12/128 (9%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
            S +I   G          +S  + N    G        +         +HG G      
Sbjct: 147 QSINIGADG---------TVSVTLGNN---GQAEVLGQIQLVNFVNPAGLHGLGDNLYMN 194

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
                                +G ++  NV ++ E  D+    R Y AN ++I+ +  M+
Sbjct: 195 TNASGEPIEGIAGQDGLGQIRAGFLELSNVRLVSEMTDLITGQRAYEANSKSIQTADSML 254

Query: 126 TTTLDLLR 133
            T   L R
Sbjct: 255 QTVNGLKR 262



 Score = 38.3 bits (87), Expect = 0.32,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 19/41 (46%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          ++ S + A +G+  Q  ++   S NIAN  T G       +
Sbjct: 1  MMRSLYTATTGMLGQQLQIDTTSNNIANVNTVGFKRQRAEF 41


>gi|15646192|ref|NP_208376.1| flagellar basal body rod protein FlgG [Helicobacter pylori 26695]
 gi|188528376|ref|YP_001911063.1| flagellar basal body rod protein FlgG [Helicobacter pylori Shi470]
 gi|217033804|ref|ZP_03439229.1| hypothetical protein HP9810_877g8 [Helicobacter pylori 98-10]
 gi|308183740|ref|YP_003927867.1| flagellar basal body rod protein FlgG [Helicobacter pylori PeCan4]
 gi|2314768|gb|AAD08623.1| flagellar basal-body rod protein (flgG) [Helicobacter pylori 26695]
 gi|188144616|gb|ACD49033.1| flagellar basal body rod protein FlgG [Helicobacter pylori Shi470]
 gi|216943702|gb|EEC23145.1| hypothetical protein HP9810_877g8 [Helicobacter pylori 98-10]
 gi|261838871|gb|ACX98637.1| flagellar basal-body rod protein [Helicobacter pylori 51]
 gi|297380761|gb|ADI35648.1| flagellar basal-body rod protein FlgG [Helicobacter pylori v225d]
 gi|308062867|gb|ADO04755.1| flagellar basal body rod protein FlgG [Helicobacter pylori Cuz20]
 gi|308064367|gb|ADO06254.1| flagellar basal body rod protein FlgG [Helicobacter pylori Sat464]
 gi|308065925|gb|ADO07817.1| flagellar basal body rod protein FlgG [Helicobacter pylori PeCan4]
 gi|315585990|gb|ADU40371.1| flagellar basal-body rod protein FlgG [Helicobacter pylori 35A]
 gi|317178306|dbj|BAJ56095.1| flagellar basal body rod protein FlgG [Helicobacter pylori F16]
 gi|317179787|dbj|BAJ57575.1| flagellar basal body rod protein FlgG [Helicobacter pylori F30]
 gi|317181286|dbj|BAJ59072.1| flagellar basal body rod protein FlgG [Helicobacter pylori F32]
 gi|317182809|dbj|BAJ60593.1| flagellar basal body rod protein FlgG [Helicobacter pylori F57]
 gi|332674396|gb|AEE71213.1| flagellar basal-body rod protein FlgG [Helicobacter pylori 83]
          Length = 262

 Score = 63.7 bits (153), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 29/85 (34%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +H  G              V   D         G ++  NV ++ E  D+    
Sbjct: 178 FVNPAGLHSMGDNLFSITNASGEAIVGNPDSQGLGKLRQGFLELSNVRLVEEMTDLITAQ 237

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R Y AN ++I+ +  M+ T   L R
Sbjct: 238 RAYEANSKSIQTADAMLQTVNSLKR 262



 Score = 40.6 bits (93), Expect = 0.079,   Method: Composition-based stats.
 Identities = 15/74 (20%), Positives = 27/74 (36%), Gaps = 5/74 (6%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSD-----PYRRKTISFEEVMHGS 58
          ++ S + A SG+  Q   +   S NIAN  TTG            Y+    +     + +
Sbjct: 1  MLRSLYSATSGMLAQQTHIDTTSNNIANVNTTGFKKSRADFNDLFYQAMQYAGTNTSNTT 60

Query: 59 GGVRVKKIGVDQST 72
                ++G+    
Sbjct: 61 LSPDGMEVGLGVRP 74


>gi|222053732|ref|YP_002536094.1| flagellar basal-body rod protein FlgG [Geobacter sp. FRC-32]
 gi|221563021|gb|ACM18993.1| flagellar basal-body rod protein FlgG [Geobacter sp. FRC-32]
          Length = 262

 Score = 63.7 bits (153), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 17/86 (19%), Positives = 32/86 (37%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
           T S    +   G    K+     +              + G ++  NV+V  E  +M   
Sbjct: 177 TFSNPAGLSSQGHNLFKETESSGAATTGTSGQNGIGTLSQGYLEMSNVSVAEEMVNMIVG 236

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y  N + ++ + +M+ T  +L R
Sbjct: 237 QRAYEINSKAVQAADEMLQTANNLKR 262



 Score = 42.6 bits (98), Expect = 0.019,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 20/42 (47%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          +I +   A SG+  Q   + +++ N+AN  TTG       + 
Sbjct: 1  MIRALWTAASGMQAQQLNIDVVANNLANVNTTGFKKSRADFH 42


>gi|220929459|ref|YP_002506368.1| hypothetical protein Ccel_2042 [Clostridium cellulolyticum H10]
 gi|219999787|gb|ACL76388.1| protein of unknown function DUF1078 domain protein [Clostridium
           cellulolyticum H10]
          Length = 454

 Score = 63.7 bits (153), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 23/133 (17%), Positives = 46/133 (34%), Gaps = 24/133 (18%)

Query: 7   SAHIANSGL------AVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           + +I + G+        Q   + +I+  +A               +K      +   + G
Sbjct: 340 TFNIGSDGMLTGVYSNGQQQPLGLIA--LAGFDNPAG-------LQKVGGNLFIPTTNSG 390

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
              K +                   + G ++  NV++  E  DM  T R + AN + I  
Sbjct: 391 DFTKGVPAGS---------QGVGTLSPGTLEMSNVDLSREFTDMIVTQRGFQANSRIITT 441

Query: 121 SHDMMTTTLDLLR 133
           S +M+   ++L R
Sbjct: 442 SDEMLQELVNLKR 454



 Score = 42.2 bits (97), Expect = 0.025,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 20/42 (47%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S     SGL    A+M +I  N+AN  T G   G   ++
Sbjct: 1  MMRSMFSGVSGLKAHQAKMDVIGNNVANVNTLGFKAGRVTFQ 42


>gi|307546966|ref|YP_003899445.1| flagellar basal body rod protein FlgG [Halomonas elongata DSM 2581]
 gi|307218990|emb|CBV44260.1| flagellar basal body rod protein FlgG [Halomonas elongata DSM 2581]
          Length = 260

 Score = 63.7 bits (153), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 24/131 (18%), Positives = 44/131 (33%), Gaps = 7/131 (5%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKT--ISFEEVMHGSGG 60
            L  +  I  + L+V      I+S         G +  ++  +           +   GG
Sbjct: 135 PLEPAIIIPQNALSVSIGEDGIVS-----ITEPGSSESNEVGQISVSSFVNPTGLESIGG 189

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
              ++                    + G V+  NVNV+ E   M +T R Y  N + ++ 
Sbjct: 190 NLYRETTASGPRNEGIPGMNGAGRLSQGYVETSNVNVVEEMVGMIQTQRAYEINSKAVQT 249

Query: 121 SHDMMTTTLDL 131
           S +M+     L
Sbjct: 250 SDEMLARLTQL 260



 Score = 40.2 bits (92), Expect = 0.093,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 20/41 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I S   A +GL  Q  ++ +IS N+AN  T G       +
Sbjct: 1  MINSLWTAKTGLESQQVKLDVISNNLANVNTNGFKRSRAVF 41


>gi|302878278|ref|YP_003846842.1| flagellar basal-body rod protein FlgG [Gallionella
           capsiferriformans ES-2]
 gi|302581067|gb|ADL55078.1| flagellar basal-body rod protein FlgG [Gallionella
           capsiferriformans ES-2]
          Length = 260

 Score = 63.7 bits (153), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 19/129 (14%), Positives = 40/129 (31%), Gaps = 3/129 (2%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            +  +  +  + + V   R  ++S                  +  T      +   G   
Sbjct: 135 PVQPAISLPANAITVTIGRDGVVS---VTQPGVAAPVQVGSMQVTTFINPAGLMAQGENL 191

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
            ++     +              +   V+  NVNV+ E  +M +T R Y  N ++I  S 
Sbjct: 192 YQETASSGTPSTNVPGTNGSGLLSQNYVETSNVNVVEEMVNMIQTQRAYEINSKSITTSD 251

Query: 123 DMMTTTLDL 131
            M+     +
Sbjct: 252 QMLQKLSQM 260



 Score = 41.8 bits (96), Expect = 0.032,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 20/41 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I S  I+ +GL  Q  +M  I+ N+AN  T G       +
Sbjct: 1  MIRSLWISKTGLDAQQTQMDTIANNLANVSTNGFKRSRAVF 41


>gi|323703177|ref|ZP_08114830.1| fagellar hook-basal body protein [Desulfotomaculum nigrificans DSM
           574]
 gi|323531836|gb|EGB21722.1| fagellar hook-basal body protein [Desulfotomaculum nigrificans DSM
           574]
          Length = 256

 Score = 63.7 bits (153), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 23/125 (18%), Positives = 40/125 (32%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
             +   + +Q+  +  IS N            S+                 G  + K  +
Sbjct: 132 DTSGKAITLQTTPVNTISINDQGEIFVNGKTTSEGQVGIATCNNPAGLERVGNNLYKESL 191

Query: 69  DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
              T              SG ++  NV++  E  +M  T R Y AN + I  S  ++   
Sbjct: 192 ASGTPTPGTARAAGSTINSGYLEMSNVDLTEEMTNMITTQRGYQANARVITVSDTLLEEL 251

Query: 129 LDLLR 133
           + L R
Sbjct: 252 IQLKR 256



 Score = 37.9 bits (86), Expect = 0.50,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 25/65 (38%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I S +   SGL     RM ++  NIAN  T G       ++           G+  +  
Sbjct: 1  MIRSLYSGVSGLKNHQIRMDVVGNNIANVNTNGFKASRVNFQDAISQTMRSASGTPAINP 60

Query: 64 KKIGV 68
           +IG 
Sbjct: 61 SQIGT 65


>gi|289523332|ref|ZP_06440186.1| flagellar basal-body rod protein FlgG [Anaerobaculum
           hydrogeniformans ATCC BAA-1850]
 gi|289503024|gb|EFD24188.1| flagellar basal-body rod protein FlgG [Anaerobaculum
           hydrogeniformans ATCC BAA-1850]
          Length = 262

 Score = 63.7 bits (153), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 16/104 (15%), Positives = 33/104 (31%)

Query: 30  ANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGI 89
           A      +               + +   G     +        + +           G 
Sbjct: 159 ARQAGDVEPDEIGQIELARFVNPQGLRAMGKNLFLETPASGFPILGQPGEEGFGTLRQGA 218

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  NV V+ E   M  + R Y AN +TI+ + +++    +L R
Sbjct: 219 LEMSNVQVVEEMVSMIVSQRAYEANSKTIQTADELLQIANNLRR 262



 Score = 43.7 bits (101), Expect = 0.007,   Method: Composition-based stats.
 Identities = 16/74 (21%), Positives = 31/74 (41%), Gaps = 7/74 (9%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I +     +G+  Q + + +IS N+AN  TTG       Y++    FE++++  G    
Sbjct: 1  MIRALWSGATGMIAQQSNLDVISNNLANVNTTG-------YKKIRAEFEDLIYQIGREPG 53

Query: 64 KKIGVDQSTFVEEF 77
            +  D        
Sbjct: 54 APVEPDSMIPTGVQ 67


>gi|157146224|ref|YP_001453543.1| flagellar basal body rod protein FlgG [Citrobacter koseri ATCC
           BAA-895]
 gi|157083429|gb|ABV13107.1| hypothetical protein CKO_01981 [Citrobacter koseri ATCC BAA-895]
          Length = 260

 Score = 63.7 bits (153), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 19/126 (15%), Positives = 37/126 (29%), Gaps = 3/126 (2%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
            +  I  + L++   R  ++S      +              T   +  +   G     +
Sbjct: 138 PAITIPANSLSITVGRDGVVS---VTQQGQAAPVQVGQLNLTTFMNDTGLESIGENLYTE 194

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
                +                G V+  NVNV  E  +M +  R Y  N + +  +  M+
Sbjct: 195 TQSSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAYEINSKAVSTTDQML 254

Query: 126 TTTLDL 131
                L
Sbjct: 255 QKLTQL 260



 Score = 44.1 bits (102), Expect = 0.006,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 21/41 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I+S  IA +GL  Q   M +I+ N+AN  T G       +
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVF 41


>gi|317013400|gb|ADU84008.1| flagellar basal body rod protein FlgG [Helicobacter pylori
           Lithuania75]
          Length = 262

 Score = 63.7 bits (153), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 30/85 (35%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +H  G           +  V   D         G ++  NV ++ E  D+    
Sbjct: 178 FVNPAGLHSMGDNLFSITNASGNAIVGNPDSQGLGKLRQGFLELSNVRLVEEMTDLITAQ 237

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R Y AN ++I+ +  M+ T   L R
Sbjct: 238 RAYEANSKSIQTADAMLQTVNSLKR 262



 Score = 40.2 bits (92), Expect = 0.091,   Method: Composition-based stats.
 Identities = 15/74 (20%), Positives = 27/74 (36%), Gaps = 5/74 (6%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSD-----PYRRKTISFEEVMHGS 58
          ++ S + A SG+  Q   +   S NIAN  TTG            Y+    +     + +
Sbjct: 1  MLRSLYSATSGMLAQQTHIDTTSNNIANVNTTGFKKSRADFNDLFYQAMQYAGTNTSNTT 60

Query: 59 GGVRVKKIGVDQST 72
                ++G+    
Sbjct: 61 LSPDGMEVGLGVRP 74


>gi|77918760|ref|YP_356575.1| flagellar basal body rod protein FlgG [Pelobacter carbinolicus DSM
           2380]
 gi|77544843|gb|ABA88405.1| flagellar biosynthesis protein [Pelobacter carbinolicus DSM 2380]
          Length = 261

 Score = 63.7 bits (153), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 15/99 (15%), Positives = 32/99 (32%)

Query: 33  RTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKY 92
                            S    ++  G     +     +            + + G ++ 
Sbjct: 162 DGQNTPTQIGTITLTRFSNPAGLNSIGHNLFTETPTTGTPVTGNPGEDGFGSLSQGFLEG 221

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV+++ E  +M    R Y  N + IK + +M+  T +L
Sbjct: 222 SNVSIMEEMVNMIAGQRAYEINSKAIKTADEMLQMTNNL 260



 Score = 45.6 bits (106), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/62 (19%), Positives = 26/62 (41%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I +   + +G+  Q   M +I+ N+AN  + G       ++       +V    G   V
Sbjct: 1  MIRALWTSATGMEAQQVNMDVIAHNLANVNSAGFKKSRADFQDILYQTVKVAGSDGSSGV 60

Query: 64 KK 65
          ++
Sbjct: 61 EQ 62


>gi|308273521|emb|CBX30123.1| hypothetical protein N47_D29320 [uncultured Desulfobacterium sp.]
          Length = 469

 Score = 63.7 bits (153), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 16/86 (18%), Positives = 33/86 (38%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
               E+ ++  GG    +  +       +       + +   ++  NV++  E   M  T
Sbjct: 384 KFQNEQGLYKVGGNLFSQTRLSGEPITGKPGGNGLGSLSPNSLEQSNVDLATEFVRMITT 443

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y AN + I     M++  ++L R
Sbjct: 444 QRGYQANSKIITTIDQMLSELINLKR 469


>gi|312794499|ref|YP_004027422.1| flagellar basal-body rod protein flgg [Caldicellulosiruptor
           kristjanssonii 177R1B]
 gi|312876700|ref|ZP_07736680.1| flagellar basal-body rod protein FlgG [Caldicellulosiruptor
           lactoaceticus 6A]
 gi|311796540|gb|EFR12889.1| flagellar basal-body rod protein FlgG [Caldicellulosiruptor
           lactoaceticus 6A]
 gi|312181639|gb|ADQ41809.1| flagellar basal-body rod protein FlgG [Caldicellulosiruptor
           kristjanssonii 177R1B]
          Length = 267

 Score = 63.7 bits (153), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 26/62 (41%)

Query: 72  TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
              EE   G       G ++  NV V+ E   +    R Y  N + I+ + DM++   +L
Sbjct: 206 PVSEEEIEGQKSRILQGFLEMSNVQVVDEMVKLIIAQRAYEINSKAIQTADDMLSMANNL 265

Query: 132 LR 133
            R
Sbjct: 266 KR 267



 Score = 41.4 bits (95), Expect = 0.037,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 21/59 (35%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
          ++ + + A  G+  Q   + IIS N+AN  TT        ++              G  
Sbjct: 1  MMRALYSAALGMKAQQTNVDIISNNLANVNTTAFKKDKAEFKDLLYETLSRADVVAGDG 59


>gi|237653581|ref|YP_002889895.1| flagellar basal body rod protein FlgG [Thauera sp. MZ1T]
 gi|237624828|gb|ACR01518.1| flagellar basal-body rod protein FlgG [Thauera sp. MZ1T]
          Length = 260

 Score = 63.7 bits (153), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 23/128 (17%), Positives = 37/128 (28%), Gaps = 3/128 (2%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           L  + +I    L++   +   +S   A              +  T      +  +G    
Sbjct: 136 LADNINIPADALSITIGKDGTVSVLQA---GQTAPVEIGAIQLATFINSGGLQAAGENLF 192

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
            +          +           G V+  NVNV  E   M  T R Y  N + I  S  
Sbjct: 193 YETASSGVATPTQPGTNGAGVLNQGYVEVSNVNVAEELVSMIVTQRAYELNSRAISTSDQ 252

Query: 124 MMTTTLDL 131
           M+     L
Sbjct: 253 MLGRLTQL 260



 Score = 40.2 bits (92), Expect = 0.11,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 19/41 (46%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I S   A +GL  Q   + +IS N+AN  T G       +
Sbjct: 1  MIRSLWTARTGLDAQQTSLDVISNNLANVSTNGFKRQRAIF 41


>gi|92114096|ref|YP_574024.1| flagellar basal-body rod FlgG [Chromohalobacter salexigens DSM
           3043]
 gi|91797186|gb|ABE59325.1| Flagellar basal-body rod FlgG [Chromohalobacter salexigens DSM
           3043]
          Length = 260

 Score = 63.7 bits (153), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 30/131 (22%), Positives = 46/131 (35%), Gaps = 7/131 (5%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            L     I  + L+V  ++  ++S         GDT   +  +     F           
Sbjct: 135 PLDPPIVIPENALSVSISQDGVVS-----VTQPGDTAAQEVGQLTLSKFINPAGLQSMGE 189

Query: 63  VKKIGVDQSTFVEEFDPGHPVANA--SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
                 D S    +  PG   A     G V+  NVNV+ E   M ET R Y  N + ++ 
Sbjct: 190 NLYQETDASGPRNDLIPGMEGAGRLYQGYVETSNVNVVEEMVSMIETQRAYEINSKAVET 249

Query: 121 SHDMMTTTLDL 131
           S  M++    L
Sbjct: 250 SDQMLSRLTQL 260



 Score = 36.8 bits (83), Expect = 0.95,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I S   A +GL  Q  ++ +IS N++N  T G       +
Sbjct: 1  MIRSLWTAKTGLESQQVKLDVISNNLSNVSTNGFKRSRPVF 41


>gi|258404727|ref|YP_003197469.1| flagellar basal-body rod protein FlgG [Desulfohalobium retbaense
           DSM 5692]
 gi|257796954|gb|ACV67891.1| flagellar basal-body rod protein FlgG [Desulfohalobium retbaense
           DSM 5692]
          Length = 262

 Score = 63.7 bits (153), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 16/98 (16%), Positives = 30/98 (30%)

Query: 34  TTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
                           S    +   G     +     +  V+        A A   ++  
Sbjct: 164 EAATPSDLGTIELARFSNPAGLKNIGNNLHLETQSSGAPIVDLPGEDGLGALAQNFLEDS 223

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           NV+ + E  +M    R Y  N + +K + +M+  T  L
Sbjct: 224 NVSTMQEMVNMISAQRAYEINSKAVKTADEMLQMTNQL 261



 Score = 41.8 bits (96), Expect = 0.032,   Method: Composition-based stats.
 Identities = 16/86 (18%), Positives = 31/86 (36%), Gaps = 8/86 (9%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +  +   A +G+  Q   + +I+ N+AN  TTG         +K+    + +       V
Sbjct: 1  MTTALSTAATGMEAQQTIVDVIANNLANVNTTG--------FKKSRVDFQDLLYQDARNV 52

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGI 89
                ++        GH V  A+  
Sbjct: 53 GSAVTQENDVPTGTQIGHGVRTAAVY 78


>gi|34498338|ref|NP_902553.1| flagellar basal-body rod protein FlgG [Chromobacterium violaceum
           ATCC 12472]
 gi|34104192|gb|AAQ60551.1| flagellar basal-body rod protein FlgG [Chromobacterium violaceum
           ATCC 12472]
          Length = 260

 Score = 63.7 bits (153), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 18/129 (13%), Positives = 39/129 (30%), Gaps = 3/129 (2%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            L  + +I  +   +  +   ++   +A +               T    + +   G   
Sbjct: 135 PLNPNINIPATAQQITVSSAGVVQYTLAGSAAPQTA---GTILLTTFINPQGLQSIGNNL 191

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
             +                  A  SG ++  NVNV  E  +M    R +  N + +  + 
Sbjct: 192 YLQTAASGDPQDGNPQTDDRGAIKSGFLESSNVNVTEELVNMITAQRSFEMNSRAVTTAD 251

Query: 123 DMMTTTLDL 131
            M+    +L
Sbjct: 252 QMLQKLSNL 260



 Score = 39.5 bits (90), Expect = 0.18,   Method: Composition-based stats.
 Identities = 18/132 (13%), Positives = 42/132 (31%), Gaps = 18/132 (13%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSD-----PYRRKTISFEEVMHGS 58
           ++ + +IA +G+     ++ ++S N+AN  T G            Y+       ++ +G+
Sbjct: 1   MMRALYIAKTGMDTSQFQLDVVSNNLANVNTVGFKKSRGIFEDLYYQTLRQPGGQLANGN 60

Query: 59  GGVRVKKIGV-----------DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                 ++G             Q    +   P        G  +    +     +   + 
Sbjct: 61  ANPTGLQVGTGAAAVASSRIFTQGPPQQTGQPLDLQIQGDGFFRLLQPDGTTAYSRNGQF 120

Query: 108 NRLYMANLQTIK 119
            R   AN   + 
Sbjct: 121 QR--DANGNVVN 130


>gi|46578723|ref|YP_009531.1| flagella basal body rod domain-containing protein [Desulfovibrio
           vulgaris str. Hildenborough]
 gi|120603713|ref|YP_968113.1| hypothetical protein Dvul_2674 [Desulfovibrio vulgaris DP4]
 gi|46448135|gb|AAS94790.1| flagella basal body rod domain protein [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120563942|gb|ABM29686.1| protein of unknown function DUF1078 domain protein [Desulfovibrio
           vulgaris DP4]
 gi|311232595|gb|ADP85449.1| flagellar hook-basal body protein [Desulfovibrio vulgaris RCH1]
          Length = 498

 Score = 63.7 bits (153), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 14/86 (16%), Positives = 31/86 (36%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
             + E+ +   G           +    + D  +        ++  NV++  E  +M  T
Sbjct: 413 RFTSEDGLRSEGMNHYSATTESGAAQEGKADTENYGKLMGKSLEQSNVDMAREMVNMIVT 472

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R +  N + +  +  M+   L+L R
Sbjct: 473 QRGFQTNSKVVTTADTMIQKALELKR 498



 Score = 36.0 bits (81), Expect = 1.6,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 19/42 (45%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++   +   +G+  Q+  M ++  N+AN  T G       Y+
Sbjct: 1  MMHGLYTGATGMRTQAEGMNVVGNNLANVNTIGFKQSMMLYQ 42


>gi|24214555|ref|NP_712036.1| endoflagellar distal basal body rod protein [Leptospira interrogans
           serovar Lai str. 56601]
 gi|45657887|ref|YP_001973.1| hook protein [Leptospira interrogans serovar Copenhageni str.
           Fiocruz L1-130]
 gi|24195518|gb|AAN49054.1| endoflagellar distal basal body rod protein [Leptospira interrogans
           serovar Lai str. 56601]
 gi|45601128|gb|AAS70610.1| hook protein [Leptospira interrogans serovar Copenhageni str.
           Fiocruz L1-130]
          Length = 287

 Score = 63.7 bits (153), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 38/109 (34%), Gaps = 3/109 (2%)

Query: 25  ISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDP---GH 81
           I  +  N  +        P     I    V +     +        +    E  P     
Sbjct: 175 IGNDPVNGTSIDKNRFETPVLLDKIKIRTVENPRHLDKEGDSFYADTPESGEPVPFDLKD 234

Query: 82  PVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             +   G ++  NV+V+ E  +M E NR Y AN +T++    ++   ++
Sbjct: 235 EPSVLQGYLEASNVSVVTEMVEMIEVNRSYEANQKTVQTQDSLLGKLIN 283



 Score = 49.1 bits (115), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/102 (16%), Positives = 34/102 (33%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           ++   +   +G+ +Q  RM +IS N+AN   T     +  ++             G  +V
Sbjct: 1   MLRGIYTGANGMIIQQTRMDVISNNLANVDKTAFKRDTTIFKTFPELLLHRFDEDGVGKV 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
                D +  + +   G  V       +   V       D+ 
Sbjct: 61  PMGSFDTAPVIGKLGLGGEVNEVYTRFEQGAVKKTENPFDLM 102


>gi|237731009|ref|ZP_04561490.1| flagellar basal body rod protein FlgG [Citrobacter sp. 30_2]
 gi|226906548|gb|EEH92466.1| flagellar basal body rod protein FlgG [Citrobacter sp. 30_2]
          Length = 260

 Score = 63.7 bits (153), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 20/126 (15%), Positives = 37/126 (29%), Gaps = 3/126 (2%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
            +  I  + L++   R  I+S      +              T   +  +   G     +
Sbjct: 138 PAITIPANSLSITIGRDGIVS---VTQQGQAAPVQVGQLNLTTFMNDTGLESIGENLYTE 194

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
                +                G V+  NVNV  E  +M +  R Y  N + +  +  M+
Sbjct: 195 TQSSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAYEINSKAVSTTDQML 254

Query: 126 TTTLDL 131
                L
Sbjct: 255 QKLTQL 260



 Score = 44.1 bits (102), Expect = 0.006,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 21/41 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I+S  IA +GL  Q   M +I+ N+AN  T G       +
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVF 41


>gi|218135322|ref|ZP_03464126.1| hypothetical protein BACPEC_03227 [Bacteroides pectinophilus ATCC
           43243]
 gi|217990707|gb|EEC56718.1| hypothetical protein BACPEC_03227 [Bacteroides pectinophilus ATCC
           43243]
          Length = 276

 Score = 63.7 bits (153), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 18/101 (17%), Positives = 30/101 (29%)

Query: 34  TTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
                 G      +  +   +   SGG+         +                G ++  
Sbjct: 176 GNPAAIGIQFGLYQFTNPSGLDKTSGGLLAATDASGDALNESVDQVTKKSQLKQGYLEGS 235

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
           NVNV  E  ++    R Y  N + I  S +M+     L R 
Sbjct: 236 NVNVATEMVNLITAQRAYELNSKAINASDEMLQQANQLYRS 276



 Score = 44.9 bits (104), Expect = 0.004,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 25/63 (39%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ S   A SG+  Q   +  I+ N+AN  TTG    S  ++       +    +     
Sbjct: 5  MMRSLWTAASGMTAQQTNVDTIANNLANVNTTGYKTESAEFKTLLYQNLQTKTTTANGEN 64

Query: 64 KKI 66
          K +
Sbjct: 65 KPV 67


>gi|310659662|ref|YP_003937383.1| flagellar component of cell-distal portion of basal-body rod
           [Clostridium sticklandii DSM 519]
 gi|308826440|emb|CBH22478.1| flagellar component of cell-distal portion of basal-body rod
           [Clostridium sticklandii]
          Length = 266

 Score = 63.7 bits (153), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 19/77 (24%), Positives = 30/77 (38%)

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
            + G     +  +    V E D         G ++  NV ++ E   M    R Y  N +
Sbjct: 190 QAMGNNFFSLTANSGEPVIEEDESKDTKLYQGFLETSNVQLVDEMVRMIMAQRAYEINSK 249

Query: 117 TIKQSHDMMTTTLDLLR 133
           +I+ + DMM T   L R
Sbjct: 250 SIQTADDMMQTVNSLKR 266



 Score = 44.5 bits (103), Expect = 0.005,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 19/41 (46%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          + +   A SG+  Q   M  IS N+AN  TTG       ++
Sbjct: 1  MRALWTAASGMRAQQLNMDTISNNLANVNTTGFKKQKTEFK 41


>gi|90415316|ref|ZP_01223250.1| flagellar basal-body rod protein FlgG (distal rod protein) [marine
           gamma proteobacterium HTCC2207]
 gi|90332639|gb|EAS47809.1| flagellar basal-body rod protein FlgG (distal rod protein) [marine
           gamma proteobacterium HTCC2207]
          Length = 261

 Score = 63.7 bits (153), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 20/127 (15%), Positives = 45/127 (35%), Gaps = 3/127 (2%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           L+ +  +  +  ++   R  +++  ++N    G +      +         +   G   +
Sbjct: 136 LLPAITVPQNAASLTIGRDGVVTVELSNG---GGSSQIGQLQLSRFVNNSGLQPIGRNLM 192

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
           ++        V             G ++  NVNV+ E  +M ET R Y  N + I  +  
Sbjct: 193 QQTNASGDPLVVLPGADGAGMLMQGALEASNVNVVEEMVNMIETQRAYEVNSKAISAADG 252

Query: 124 MMTTTLD 130
           M+    +
Sbjct: 253 MLRFLNN 259



 Score = 45.2 bits (105), Expect = 0.003,   Method: Composition-based stats.
 Identities = 17/41 (41%), Positives = 22/41 (53%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          + AS  IA +GL  Q  RM +IS N+AN  TTG       +
Sbjct: 1  MDASLWIAKTGLTAQQTRMSVISNNLANVNTTGFKKDRAVF 41


>gi|83816512|ref|YP_446741.1| flagellar basal-body rod protein FlgG [Salinibacter ruber DSM
           13855]
 gi|294508677|ref|YP_003572736.1| flagellar basal-body rod protein FlgG [Salinibacter ruber M8]
 gi|83757906|gb|ABC46019.1| flagellar basal-body rod protein FlgG [Salinibacter ruber DSM
           13855]
 gi|294345006|emb|CBH25784.1| flagellar basal-body rod protein FlgG [Salinibacter ruber M8]
          Length = 262

 Score = 63.7 bits (153), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 17/86 (19%), Positives = 31/86 (36%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                  +   GG   ++       F+     G       G ++  NV V+ E   + + 
Sbjct: 177 RFPNSAGLRPQGGNLYEQTESSGEPFIGTPGRGGLGNVRQGFLEKGNVKVVQEMTSLIQA 236

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y  N + +  S +MM T  ++ R
Sbjct: 237 QRTYELNSRMVTTSDEMMQTANNVKR 262



 Score = 35.6 bits (80), Expect = 2.0,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 18/40 (45%)

Query: 6  ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
           S   A  G+  Q   +  I+ N++NA TTG       ++
Sbjct: 4  RSLQTAALGMQAQQTSIDNIANNLSNANTTGYKRSRVVFQ 43


>gi|296103609|ref|YP_003613755.1| Flagellar basal-body rod protein, FlgG [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
 gi|295058068|gb|ADF62806.1| Flagellar basal-body rod protein, FlgG [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
          Length = 260

 Score = 63.7 bits (153), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 21/114 (18%), Positives = 35/114 (30%), Gaps = 2/114 (1%)

Query: 20  ARMQIISENIANARTTGDTPGSDPYRRK--TISFEEVMHGSGGVRVKKIGVDQSTFVEEF 77
            ++ I S+ I + +  G        +    T      +   GG   K+     +      
Sbjct: 147 TKLNIGSDGIVSVKVPGQAEEQQIGQLTLTTFVNNAGLESIGGNLYKETQSSGAPNELNP 206

Query: 78  DPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
                       V+  NVNV  E   M +  R Y  N + +  S  M+     L
Sbjct: 207 GMESAGTLKQSYVEISNVNVAEELVTMIQVQRAYEINSKAVSASDQMLQRLSQL 260



 Score = 45.2 bits (105), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/93 (20%), Positives = 29/93 (31%), Gaps = 7/93 (7%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR-------RKTISFEEVMH 56
          +I S  IA +GL  Q   M +IS N+AN  T G       ++       R+  +     +
Sbjct: 1  MIRSLWIAKTGLEAQQLNMDVISNNLANVNTNGFKRQRAVFQDLLYQNMRQPGAQSTEQN 60

Query: 57 GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGI 89
                    GV   +       G         
Sbjct: 61 TLPSGLQLGTGVRPVSTQRVHTQGGMNQTGDEY 93


>gi|119953549|ref|YP_945759.1| flagellar basal body rod protein FlgG [Borrelia turicatae 91E135]
 gi|119862320|gb|AAX18088.1| flagellar basal-body rod protein FlgG [Borrelia turicatae 91E135]
          Length = 264

 Score = 63.7 bits (153), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 16/86 (18%), Positives = 28/86 (32%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                  ++  G    K+                      GI++  NV++  E   M   
Sbjct: 179 RFVNPAGLNAIGNNIFKETIGSGEEISGTPGSSGMGRLRQGILEMSNVSIAEEMVTMIVA 238

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y  N + I+ S +M+    +L R
Sbjct: 239 QRAYEINSKAIQTSDNMLGIANNLKR 264



 Score = 42.6 bits (98), Expect = 0.018,   Method: Composition-based stats.
 Identities = 10/33 (30%), Positives = 18/33 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ +   A SG+  Q   +  I+ N++N  TTG
Sbjct: 1  MMRALWTAASGMKAQQYNVDTIANNLSNVNTTG 33


>gi|83594175|ref|YP_427927.1| flagellar basal body rod protein FlgG [Rhodospirillum rubrum ATCC
           11170]
 gi|83577089|gb|ABC23640.1| conserved hypothetical protein [Rhodospirillum rubrum ATCC 11170]
          Length = 261

 Score = 63.4 bits (152), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 17/117 (14%), Positives = 38/117 (32%)

Query: 16  AVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVE 75
             +S  +    E +           +   +      +  ++  G   + +     +  V 
Sbjct: 145 NAESITINPTGEVLYKIDGQTALVNAGQIQTAIFPNDAGLNAIGDNYLTETAGSGAPTVG 204

Query: 76  EFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
                       G ++  NVNV+ E  ++    R Y  N + I  S +M++T   + 
Sbjct: 205 VPGSVGFGTILQGYLESSNVNVVSEITELISAQRAYEMNSKVITTSDEMLSTISRMK 261



 Score = 41.8 bits (96), Expect = 0.036,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 21/41 (51%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          + + +I  +G+  Q   +++IS NIAN  TT  T     + 
Sbjct: 1  MRALNIGATGMLAQQTNVEVISNNIANMNTTAYTRRRAEFH 41


>gi|88704304|ref|ZP_01102018.1| Flagellar basal-body rod protein flgG [Congregibacter litoralis
           KT71]
 gi|88701355|gb|EAQ98460.1| Flagellar basal-body rod protein flgG [Congregibacter litoralis
           KT71]
          Length = 243

 Score = 63.4 bits (152), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 37/123 (30%), Gaps = 3/123 (2%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           L     +    L+V  A    +S        T         +         +   G    
Sbjct: 118 LQPPITVPQDALSVTIAADGTVSVQ---QPGTAAATQIGLVQLTDFINPAGLQARGENLF 174

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
            + G   +              + G V+  NVNV+ E  +M ET R Y  N + I  +  
Sbjct: 175 LESGASGAPQPGNPGLNGLGTLSQGYVESSNVNVVEELVNMIETQRAYEMNSRAISTADQ 234

Query: 124 MMT 126
           M+ 
Sbjct: 235 MLQ 237


>gi|291518270|emb|CBK73491.1| fagellar hook-basal body proteins [Butyrivibrio fibrisolvens 16/4]
          Length = 272

 Score = 63.4 bits (152), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 21/47 (44%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NVNV  E  ++    R Y  N + I  S  M+    +L R
Sbjct: 226 QGYLEGSNVNVADEMVNLIIAQRAYEMNSKAITTSDTMLEQANNLKR 272



 Score = 39.5 bits (90), Expect = 0.17,   Method: Composition-based stats.
 Identities = 12/61 (19%), Positives = 22/61 (36%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ S     SG+  Q  ++  I+ N+AN  T      S  ++       E    +     
Sbjct: 1  MVRSLWSGASGMKGQQVQVDTIANNLANVNTMAYKSQSAQFKTLLYQTLEAESTNAQGET 60

Query: 64 K 64
          K
Sbjct: 61 K 61


>gi|327398888|ref|YP_004339757.1| flagellar basal-body rod protein FlgG [Hippea maritima DSM 10411]
 gi|327181517|gb|AEA33698.1| flagellar basal-body rod protein FlgG [Hippea maritima DSM 10411]
          Length = 262

 Score = 63.4 bits (152), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 19/118 (16%), Positives = 39/118 (33%), Gaps = 7/118 (5%)

Query: 23  QIISENIAN-------ARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVE 75
             ++ NI N                    +         +   G    ++     +  V+
Sbjct: 145 DTVAINIGNDGTVSVLEAGQQTPSQIGQIQLAYFVNPAGLKAIGHNLYQETTASGTATVD 204

Query: 76  EFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
                       G+++  NV+V+ E  +M    R Y  N + I+ S +M+ T  ++ R
Sbjct: 205 NPGSNGLGTLEQGVLEMSNVSVVQEMVEMIAAQRAYETNAKAIQTSDEMLQTANNVKR 262



 Score = 41.8 bits (96), Expect = 0.029,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 18/41 (43%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I S   A +G+  Q   +  I+ N+AN  T G       +
Sbjct: 1  MIRSLWTAATGMEAQQLNVDTIANNLANVNTVGFKRSRADF 41


>gi|78777301|ref|YP_393616.1| flagellar basal body rod protein FlgG [Sulfurimonas denitrificans
           DSM 1251]
 gi|78497841|gb|ABB44381.1| Flagellar basal-body rod FlgG [Sulfurimonas denitrificans DSM 1251]
          Length = 262

 Score = 63.4 bits (152), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 30/85 (35%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +H  G     +                      G V+  NV ++VE  D+    
Sbjct: 178 FINPAGLHSMGDNLYIETDSSGQPVEGTPGLDGLGVLRQGFVELSNVELVVELTDLITGQ 237

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R Y +N + I  S +M+ TT +L R
Sbjct: 238 RAYDSNSKVITTSDEMLQTTNNLKR 262



 Score = 37.2 bits (84), Expect = 0.70,   Method: Composition-based stats.
 Identities = 11/62 (17%), Positives = 22/62 (35%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ S + A++G+     ++   + NIAN  T G       +        +    S     
Sbjct: 1  MMQSLYTASTGMIGMQTQINTTANNIANVNTIGFKKSRAEFADLMYKVMDYAGTSTSDVT 60

Query: 64 KK 65
          K 
Sbjct: 61 KS 62


>gi|30248324|ref|NP_840394.1| flagellar basal body rod protein FlgG [Nitrosomonas europaea ATCC
           19718]
 gi|30138210|emb|CAD84218.1| Flagella basal body rod protein [Nitrosomonas europaea ATCC 19718]
          Length = 260

 Score = 63.4 bits (152), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/129 (19%), Positives = 40/129 (31%), Gaps = 3/129 (2%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            L  S  I  + L +   R   +S  +          G+   +  T      +   G   
Sbjct: 135 PLQPSITIPPNTLNITIGRDGTVSV-LTPGSALPVPVGN--IQLTTFINPAGLQRFGENL 191

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
             +                      G V+  NVNV+ E  +M +T R Y  N ++I  S 
Sbjct: 192 YLETMSSGVPNPGIPGTNGIGLLNQGFVETSNVNVVEELVEMIQTQRAYEINSRSISTSD 251

Query: 123 DMMTTTLDL 131
            M+     L
Sbjct: 252 QMLARLTQL 260



 Score = 44.9 bits (104), Expect = 0.003,   Method: Composition-based stats.
 Identities = 12/33 (36%), Positives = 20/33 (60%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ S  I+ +GL  Q  +M +I+ N+AN  T G
Sbjct: 1  MVRSLWISKTGLDAQQTKMDVIANNLANISTNG 33


>gi|323165588|gb|EFZ51375.1| flagellar basal-body rod protein flgG [Shigella sonnei 53G]
          Length = 125

 Score = 63.4 bits (152), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 19/128 (14%), Positives = 37/128 (28%), Gaps = 3/128 (2%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +  +  I  + L++   R  ++S      +              T   +  +   G    
Sbjct: 1   MQPAITIPANALSITIGRDGVVS---VTQQGQAAPVQVGQLNLTTFMNDTGLESIGENLY 57

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
            +                      G V+  NVNV  E  +M +  R Y  N + +  +  
Sbjct: 58  TETQSSGVPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAYEINSKAVSTTDQ 117

Query: 124 MMTTTLDL 131
           M+     L
Sbjct: 118 MLQKLTQL 125


>gi|311280015|ref|YP_003942246.1| flagellar basal-body rod protein FlgG [Enterobacter cloacae SCF1]
 gi|308749210|gb|ADO48962.1| flagellar basal-body rod protein FlgG [Enterobacter cloacae SCF1]
          Length = 260

 Score = 63.4 bits (152), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 19/126 (15%), Positives = 38/126 (30%), Gaps = 3/126 (2%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
            +  I  + L++   R  ++S      +   +          T   +  +   G     +
Sbjct: 138 PAITIPANTLSITIGRDGVVS---VTQQGQTNPVQVGQLNLTTFMNDAGLESIGENLYTE 194

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
                +                G V+  NVNV  E  +M +  R Y  N + +  +  M+
Sbjct: 195 TQASGAPNDTTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAYEINSKAVTTTDQML 254

Query: 126 TTTLDL 131
                L
Sbjct: 255 QKLTQL 260



 Score = 44.5 bits (103), Expect = 0.005,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 21/41 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I+S  IA +GL  Q   M +I+ N+AN  T G       +
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVF 41


>gi|295111397|emb|CBL28147.1| flagellar basal-body rod protein FlgG, Gram-negative bacteria
           [Synergistetes bacterium SGP1]
          Length = 268

 Score = 63.4 bits (152), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 19/130 (14%), Positives = 40/130 (30%), Gaps = 3/130 (2%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           L  +  +  +  +VQ  R   +   +       +                 +   G    
Sbjct: 142 LEPAMVVPENATSVQLTRTGRV---MVTIPGQTEPQEIGQLELARFINPAGLRALGDRLF 198

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
            +     +  V +           G+++  NV V+ E   M    R Y AN + I+ + +
Sbjct: 199 LETSASGAPIVGQPGQNGMPTVRQGVLEMSNVQVVEEMVGMIIAQRAYEANSKGIQTADE 258

Query: 124 MMTTTLDLLR 133
           ++     L R
Sbjct: 259 LLRIANGLKR 268



 Score = 42.9 bits (99), Expect = 0.013,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 19/41 (46%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          ++ +   + SG+  Q   + ++S N+AN  T G       +
Sbjct: 1  MLRALWSSASGMIAQQTNLDVVSHNLANVNTQGYKKRRADF 41


>gi|197122873|ref|YP_002134824.1| hypothetical protein AnaeK_2470 [Anaeromyxobacter sp. K]
 gi|196172722|gb|ACG73695.1| protein of unknown function DUF1078 domain protein
           [Anaeromyxobacter sp. K]
          Length = 428

 Score = 63.4 bits (152), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 13/85 (15%), Positives = 36/85 (42%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +  + +  +GG  +++        V     G   +  +G ++  NV++  +   +    
Sbjct: 344 FAAPDQLDRAGGNLLQQTPGSGQPVVGAAGSGGRASVVAGSLEQSNVDLAEQFVRLIAAQ 403

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R + AN +TI  +  +++  + + R
Sbjct: 404 RAFQANSKTITTADQLLSELIAMKR 428



 Score = 39.5 bits (90), Expect = 0.15,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 20/43 (46%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
            L+ +     +GL   S  + ++ +NIANA T G   G   +
Sbjct: 1  MSLLTALSSGTTGLQASSLELSVVGDNIANANTVGFKSGRAAF 43


>gi|302343734|ref|YP_003808263.1| fagellar hook-basal body protein [Desulfarculus baarsii DSM 2075]
 gi|301640347|gb|ADK85669.1| fagellar hook-basal body protein [Desulfarculus baarsii DSM 2075]
          Length = 786

 Score = 63.4 bits (152), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 31/85 (36%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +  E +   G     +              G   +  SG ++  NV++  E   M    
Sbjct: 702 FANPEGLAREGDNLWSQTTKSGEPIENTPGQGGTGSIESGALEQSNVDLATEMVKMILYQ 761

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R Y AN ++I  +  M+   ++L R
Sbjct: 762 RAYQANSKSISTTDQMLQELINLKR 786


>gi|193222346|emb|CAL62046.2| Flagellar basal-body rod protein FlgG (Distal rod protein)
           [Herminiimonas arsenicoxydans]
          Length = 260

 Score = 63.4 bits (152), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 21/129 (16%), Positives = 39/129 (30%), Gaps = 3/129 (2%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            +  +  I  +  ++  +R  I+S  +     T         +  T      +   G   
Sbjct: 135 PIQPAITIPENATSITISRDGIVSVTV---SGTTAATEIGALQLATFINPAGLMSRGENL 191

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
             +     +                  V+  NVNV+ E   M +T R Y  N + I  S 
Sbjct: 192 YVETTASGTANTNTPGSNGAGLLKQNYVETSNVNVVEELVSMIQTQRAYEINSKAITTSD 251

Query: 123 DMMTTTLDL 131
            M+     +
Sbjct: 252 QMLQRLTQI 260



 Score = 41.8 bits (96), Expect = 0.028,   Method: Composition-based stats.
 Identities = 15/41 (36%), Positives = 22/41 (53%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I S  I+ +GL  Q  +M +IS N+AN  TTG       +
Sbjct: 1  MIRSLWISKTGLDAQQTQMDVISNNLANVSTTGFKRSRAVF 41


>gi|86157813|ref|YP_464598.1| hypothetical protein Adeh_1387 [Anaeromyxobacter dehalogenans
           2CP-C]
 gi|85774324|gb|ABC81161.1| conserved hypothetical protein [Anaeromyxobacter dehalogenans
           2CP-C]
          Length = 428

 Score = 63.4 bits (152), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 13/85 (15%), Positives = 36/85 (42%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +  + +  +GG  +++        V     G   +  +G ++  NV++  +   +    
Sbjct: 344 FAAPDQLDRAGGNLLQQTPGSGQPVVGAAGAGGRASIVAGSLEQSNVDLAEQFVRLIAAQ 403

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R + AN +TI  +  +++  + + R
Sbjct: 404 RAFQANSKTITTADQLLSELIAMKR 428



 Score = 39.5 bits (90), Expect = 0.14,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 20/43 (46%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
            L+ +     +GL   S  + ++ +NIANA T G   G   +
Sbjct: 1  MSLLTALSSGTTGLQASSLELSVVGDNIANANTVGFKSGRAAF 43


>gi|238782794|ref|ZP_04626823.1| Flagellar basal-body rod protein flgG [Yersinia bercovieri ATCC
           43970]
 gi|238716217|gb|EEQ08200.1| Flagellar basal-body rod protein flgG [Yersinia bercovieri ATCC
           43970]
          Length = 260

 Score = 63.4 bits (152), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 17/84 (20%), Positives = 28/84 (33%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
           T   +  +   G    ++     +                G V+  NVNV  E  +M +T
Sbjct: 177 TFINDSGLESIGENLYRETQSSGAPNETTPGLNGSGTLRQGYVETSNVNVAEELVNMIQT 236

Query: 108 NRLYMANLQTIKQSHDMMTTTLDL 131
            R Y  N + +  S  M+     L
Sbjct: 237 QRAYEINSKAVSTSDQMLQRLTQL 260



 Score = 43.7 bits (101), Expect = 0.007,   Method: Composition-based stats.
 Identities = 15/41 (36%), Positives = 20/41 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I S  IA +GL  Q   M +IS N+AN  T G       +
Sbjct: 1  MIRSLWIAKTGLEAQQTNMDVISNNLANVSTNGFKRQRAVF 41


>gi|302671949|ref|YP_003831909.1| flagellar basal-body rod protein FlgG1 [Butyrivibrio
           proteoclasticus B316]
 gi|302396422|gb|ADL35327.1| flagellar basal-body rod protein FlgG1 [Butyrivibrio
           proteoclasticus B316]
          Length = 276

 Score = 63.4 bits (152), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 15/47 (31%), Positives = 22/47 (46%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NVNV  E  ++    R Y  N   I+ + +MM T   L R
Sbjct: 230 QGYLEGSNVNVATEMVNLIVAQRAYEMNSTAIQTTDEMMQTANGLKR 276



 Score = 42.9 bits (99), Expect = 0.014,   Method: Composition-based stats.
 Identities = 12/63 (19%), Positives = 24/63 (38%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ S   A +G+  Q   +  IS N+AN  T G       ++       + +  +     
Sbjct: 1  MVRSLWSAATGMNAQQTNVDTISNNLANVNTAGYKAQGAQFKSLLYQELQTVTTTANGAP 60

Query: 64 KKI 66
          K +
Sbjct: 61 KPV 63


>gi|320537132|ref|ZP_08037104.1| flagellar basal-body rod protein FlgG [Treponema phagedenis F0421]
 gi|320146005|gb|EFW37649.1| flagellar basal-body rod protein FlgG [Treponema phagedenis F0421]
          Length = 264

 Score = 63.4 bits (152), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 15/86 (17%), Positives = 27/86 (31%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                  +   G    K+                        ++  NV+ + E  +M   
Sbjct: 179 RFQNNAGLAAEGSNLFKQTPASGQAIPGRPGFNGFGKTEHKFLEMSNVSTVSEMVNMIVA 238

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y  N + I+ S +M+ T + L R
Sbjct: 239 QRAYEFNSKAIQTSDNMLGTAVGLKR 264



 Score = 43.3 bits (100), Expect = 0.011,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I S   A SG+  Q A +  ++ N+AN  T+G       +
Sbjct: 1  MIRSLWTAASGMNSQQANIDTVANNLANVNTSGFKKQRAEF 41


>gi|254516991|ref|ZP_05129049.1| flagellar basal-body rod protein FlgG [gamma proteobacterium
           NOR5-3]
 gi|219674496|gb|EED30864.1| flagellar basal-body rod protein FlgG [gamma proteobacterium
           NOR5-3]
          Length = 261

 Score = 63.4 bits (152), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 22/119 (18%), Positives = 37/119 (31%), Gaps = 3/119 (2%)

Query: 8   AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
             +    L+V  A    +S        T  +      +         +   G     + G
Sbjct: 140 ITVPQDALSVTIANDGTVSVQ---QPGTAASTQIGLVQLTDFINPSGLQARGENLFLESG 196

Query: 68  VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
              +              + G V+  NVNV+ E  +M ET R Y  N + I  +  M+ 
Sbjct: 197 ASGAPQPGNPGLNGLGTLSQGYVESSNVNVVEELVNMIETQRAYEMNSRAISTADQMLQ 255



 Score = 43.7 bits (101), Expect = 0.008,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 21/41 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  S  I+ +GL  Q  +M  I+ N+AN  TTG   G   +
Sbjct: 1  MNQSLWISKTGLDAQQTKMSTIANNLANVGTTGFKRGRAIF 41


>gi|163789641|ref|ZP_02184079.1| flagellar hook protein [Carnobacterium sp. AT7]
 gi|159875173|gb|EDP69239.1| flagellar hook protein [Carnobacterium sp. AT7]
          Length = 289

 Score = 63.4 bits (152), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 36/85 (42%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            S  + +  SGG    +     +            +  SG ++  NV++  E  +M  T+
Sbjct: 205 FSNPDGLQKSGGNLYTETANSGAPEAGSPGEPGYGSVRSGFLEMSNVDLANEFTEMIVTS 264

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R Y AN ++I  S  M+   ++L R
Sbjct: 265 RSYQANSRSITTSDTMLEELINLKR 289



 Score = 36.0 bits (81), Expect = 1.7,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          ++ S +   +G+     +M +IS NIAN  TT    G   +
Sbjct: 1  MLKSLYSGVTGMKNIQTKMDVISNNIANVNTTAFKTGRVRF 41


>gi|169831903|ref|YP_001717885.1| hypothetical protein Daud_1757 [Candidatus Desulforudis audaxviator
           MP104C]
 gi|169638747|gb|ACA60253.1| protein of unknown function DUF1078 domain protein [Candidatus
           Desulforudis audaxviator MP104C]
          Length = 310

 Score = 63.0 bits (151), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/133 (21%), Positives = 48/133 (36%), Gaps = 16/133 (12%)

Query: 5   IASAHIANSGLAVQSARMQIIS----ENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           + +  I  +GL   + R    +    +N  N        G+           E    + G
Sbjct: 190 LTTLRIDPNGLIFVNGRTDRAALILIDNYGNPENLTRLGGNLYEVPLRGQNAEPTPYNEG 249

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
             V   G  Q   V            SG ++  NV++  E A+M  T R + AN + I  
Sbjct: 250 WGVPDSGGGQGRLV------------SGALEMSNVDLSAEFANMITTQRGFQANARVITV 297

Query: 121 SHDMMTTTLDLLR 133
           S +M+   ++L R
Sbjct: 298 SDEMLQELINLKR 310



 Score = 43.7 bits (101), Expect = 0.008,   Method: Composition-based stats.
 Identities = 21/70 (30%), Positives = 26/70 (37%), Gaps = 6/70 (8%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I S     SGL     RM +I+ NIAN  TT    G      +    E +     G   
Sbjct: 1  MIRSLTSGVSGLRNHQVRMDVIANNIANVNTTAFKAG------RVNFQEILSQNIRGTSA 54

Query: 64 KKIGVDQSTF 73
            IGVD    
Sbjct: 55 STIGVDSINP 64


>gi|220917665|ref|YP_002492969.1| protein of unknown function DUF1078 domain protein
           [Anaeromyxobacter dehalogenans 2CP-1]
 gi|219955519|gb|ACL65903.1| protein of unknown function DUF1078 domain protein
           [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 428

 Score = 63.0 bits (151), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 13/85 (15%), Positives = 36/85 (42%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +  + +  +GG  +++        V     G   +  +G ++  NV++  +   +    
Sbjct: 344 FAAPDQLDRAGGNLLQQTPGSGQPVVGAAGSGGRASVVAGSLEQSNVDLAEQFVRLIAAQ 403

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R + AN +TI  +  +++  + + R
Sbjct: 404 RAFQANSKTITTADQLLSELIAMKR 428



 Score = 39.5 bits (90), Expect = 0.17,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 20/43 (46%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
            L+ +     +GL   S  + ++ +NIANA T G   G   +
Sbjct: 1  MSLLTALSSGTTGLQASSLELSVVGDNIANANTVGFKSGRAAF 43


>gi|192361762|ref|YP_001982398.1| flagellar basal body rod protein FlgG [Cellvibrio japonicus
           Ueda107]
 gi|190687927|gb|ACE85605.1| flagellar basal-body rod protein FlgG [Cellvibrio japonicus
           Ueda107]
          Length = 261

 Score = 63.0 bits (151), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 17/106 (16%), Positives = 32/106 (30%), Gaps = 3/106 (2%)

Query: 24  IISEN---IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPG 80
            I  N    A A    D                 +   GG    +     +         
Sbjct: 150 TIGSNGTVNAFAPGVADPQQLGDITLTDFINPSGLQAIGGNLFLETPASGNPVQGIPGEN 209

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
              +   G+++  NV+++ E  +M  T R Y  N + +  +  M+ 
Sbjct: 210 GMGSLKQGMLESSNVDIVEEMVNMITTQRAYEMNSKVVSTADQMLQ 255



 Score = 39.5 bits (90), Expect = 0.18,   Method: Composition-based stats.
 Identities = 19/108 (17%), Positives = 39/108 (36%), Gaps = 6/108 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           + ++ +++ +GLA Q  ++  IS N+AN  T G          + I  + +         
Sbjct: 1   MHSALYVSKTGLAAQDRQLATISNNLANVATVGFKRD------RAIFEDLLYQNQRQPGA 54

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
           ++    Q     +   G  V          N+ V  +  D+    R +
Sbjct: 55  QETQETQLPSGLQLGTGVRVVATQKEFTEGNIQVTEQALDVAIDGRGF 102


>gi|302338304|ref|YP_003803510.1| flagellar basal-body rod protein FlgG [Spirochaeta smaragdinae DSM
           11293]
 gi|301635489|gb|ADK80916.1| flagellar basal-body rod protein FlgG [Spirochaeta smaragdinae DSM
           11293]
          Length = 264

 Score = 63.0 bits (151), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 15/86 (17%), Positives = 24/86 (27%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                  +   G    K                         ++  NV+V+ E  +M   
Sbjct: 179 RFVNPAGLSAIGQNNFKITNASGDAIPGRPGFDGMGQTVQRFLEMSNVSVVQEMVNMIVA 238

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y  N + I+ S  M+     L R
Sbjct: 239 QRAYELNSKAIQTSDTMLGIANSLKR 264



 Score = 41.0 bits (94), Expect = 0.049,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 19/41 (46%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          ++ S   A SG+  Q   +  IS N++N  TTG       +
Sbjct: 1  MMRSLWTAASGMTGQQFNIDTISNNLSNVNTTGFKKNRADF 41


>gi|325982369|ref|YP_004294771.1| flagellar basal-body rod protein FlgG [Nitrosomonas sp. AL212]
 gi|325531888|gb|ADZ26609.1| flagellar basal-body rod protein FlgG [Nitrosomonas sp. AL212]
          Length = 260

 Score = 63.0 bits (151), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 16/83 (19%), Positives = 28/83 (33%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +   G     +     +                G V+  NV+V+ E  +M +T 
Sbjct: 178 FINPSGLQKMGENLYMETASSGTPNQNAPGTNGLGILDQGFVETSNVSVVEELVNMIQTQ 237

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y  N ++I+ S  M+     L
Sbjct: 238 RAYEMNSKSIETSDQMLQKLAQL 260



 Score = 44.5 bits (103), Expect = 0.005,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 21/41 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I S  I+ +GL  Q  ++ +I+ N+AN  T G       +
Sbjct: 1  MIRSLWISKTGLEAQQTKLDVIANNLANVNTNGFKRSRAVF 41


>gi|134095095|ref|YP_001100170.1| basal-body rod protein [Herminiimonas arsenicoxydans]
          Length = 242

 Score = 63.0 bits (151), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 21/129 (16%), Positives = 39/129 (30%), Gaps = 3/129 (2%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            +  +  I  +  ++  +R  I+S  +     T         +  T      +   G   
Sbjct: 117 PIQPAITIPENATSITISRDGIVSVTV---SGTTAATEIGALQLATFINPAGLMSRGENL 173

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
             +     +                  V+  NVNV+ E   M +T R Y  N + I  S 
Sbjct: 174 YVETTASGTANTNTPGSNGAGLLKQNYVETSNVNVVEELVSMIQTQRAYEINSKAITTSD 233

Query: 123 DMMTTTLDL 131
            M+     +
Sbjct: 234 QMLQRLTQI 242


>gi|187918627|ref|YP_001884192.1| flagellar basal body rod protein FlgG [Borrelia hermsii DAH]
 gi|119861475|gb|AAX17270.1| flagellar basal-body rod protein FlgG [Borrelia hermsii DAH]
          Length = 265

 Score = 63.0 bits (151), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 16/86 (18%), Positives = 28/86 (32%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                  ++  G    K+                      GI++  NV++  E   M   
Sbjct: 179 RFVNPAGLNAIGNNIFKETIGSGEEISGTPGSDGMGRLRQGILEMSNVSIAEEMVTMIVA 238

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y  N + I+ S +M+    +L R
Sbjct: 239 QRAYEINSKAIQTSDNMLGIANNLKR 264



 Score = 42.2 bits (97), Expect = 0.026,   Method: Composition-based stats.
 Identities = 10/33 (30%), Positives = 18/33 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ +   A SG+  Q   +  I+ N++N  TTG
Sbjct: 1  MMRALWTAASGMKAQQYNVDTIANNLSNVNTTG 33


>gi|125975104|ref|YP_001039014.1| protein of unknown function DUF1078-like protein [Clostridium
           thermocellum ATCC 27405]
 gi|256003242|ref|ZP_05428234.1| flagellar basal-body rod protein FlgG [Clostridium thermocellum DSM
           2360]
 gi|281418478|ref|ZP_06249497.1| fagellar hook-basal body protein [Clostridium thermocellum JW20]
 gi|125715329|gb|ABN53821.1| protein of unknown function DUF1078-like protein [Clostridium
           thermocellum ATCC 27405]
 gi|255992933|gb|EEU03023.1| flagellar basal-body rod protein FlgG [Clostridium thermocellum DSM
           2360]
 gi|281407562|gb|EFB37821.1| fagellar hook-basal body protein [Clostridium thermocellum JW20]
 gi|316939269|gb|ADU73303.1| flagellar hook-basal body protein [Clostridium thermocellum DSM
           1313]
          Length = 266

 Score = 63.0 bits (151), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 21/45 (46%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NV V+ E   +    R Y  N + I+ + +M+    +L R
Sbjct: 222 YLESSNVQVVEEMVKLIVAQRAYEINSKAIQSADEMLGIANNLKR 266



 Score = 44.1 bits (102), Expect = 0.007,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 30/73 (41%), Gaps = 3/73 (4%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR---RKTISFEEVMHGSGG 60
          ++ +   A SG+  Q   + +I+ N++N  TT        ++     T++   ++ G G 
Sbjct: 1  MMRALWTAGSGMTAQQLNVDVIANNLSNVNTTAYKKERLEFKDMLYDTLNRAYILDGEGR 60

Query: 61 VRVKKIGVDQSTF 73
              ++G      
Sbjct: 61 PVNLQVGYGTVPM 73


>gi|323699248|ref|ZP_08111160.1| fagellar hook-basal body protein [Desulfovibrio sp. ND132]
 gi|323459180|gb|EGB15045.1| fagellar hook-basal body protein [Desulfovibrio desulfuricans
           ND132]
          Length = 541

 Score = 63.0 bits (151), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 19/100 (19%), Positives = 33/100 (33%)

Query: 34  TTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
           T G T           +    +   GG          +  V               ++  
Sbjct: 442 TNGQTEELYQVAVYKFNSPWGLRRDGGTNFVATEASGTAMVGTAGDRGRGIINQNSLEES 501

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           NV++  E ++M  T R Y AN + I  +  M+ T + + R
Sbjct: 502 NVDMSTEFSNMILTQRGYQANTKVITTADSMLNTLISIKR 541



 Score = 36.4 bits (82), Expect = 1.4,   Method: Composition-based stats.
 Identities = 16/110 (14%), Positives = 31/110 (28%), Gaps = 7/110 (6%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
             S ++  +G+   S  M +++ N+AN  T G       Y+R  I F +++         
Sbjct: 3   FGSMYVGATGVIAHSQGMSVLANNLANVNTIG-------YKRSDILFGDLISQQVATGGA 55

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
                     +        A      +         T         +  N
Sbjct: 56  LYDNGDVRINQMGMGVAVSAIRGIFTEGALSETTEATDLAISGQGFFGVN 105


>gi|313901443|ref|ZP_07834901.1| fagellar hook-basal body protein [Thermaerobacter subterraneus DSM
           13965]
 gi|313468293|gb|EFR63749.1| fagellar hook-basal body protein [Thermaerobacter subterraneus DSM
           13965]
          Length = 406

 Score = 63.0 bits (151), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 17/60 (28%), Positives = 29/60 (48%)

Query: 74  VEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           + E   G   +   G ++  NV++  E  DM  T R + AN + I  S +M+   ++L R
Sbjct: 347 IGEAGTGGRGSVTPGALEMSNVDLSREFVDMIVTQRGFQANSRVITTSDEMLQELVNLKR 406



 Score = 39.9 bits (91), Expect = 0.12,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 20/58 (34%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
          ++ S +   SGL     RM +I  NIAN  T G       ++              G 
Sbjct: 1  MMRSLYAGISGLQNHQLRMDVIGNNIANVNTVGYKSSRVTFKELFNQTLRGASAPAGP 58


>gi|239834442|ref|ZP_04682770.1| flagellar basal body rod protein FlgG [Ochrobactrum intermedium LMG
           3301]
 gi|239822505|gb|EEQ94074.1| flagellar basal body rod protein FlgG [Ochrobactrum intermedium LMG
           3301]
          Length = 226

 Score = 63.0 bits (151), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 18/126 (14%), Positives = 39/126 (30%), Gaps = 3/126 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
           + +  +  I    + V       +    A  +   +            + E  +   GG 
Sbjct: 98  NPVEPAITIPPDAIEVTITDTGQV---FAKLQDQINQVDLGQLTLANFTNEAGLEPLGGN 154

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
             ++        V         +   G ++  NV+ + E  D+    R Y  N + I+ +
Sbjct: 155 LYRETEASGGPLVGVPGDPGYGSIKQGYLEASNVDPVKEITDLITAQRAYEMNSKVIQAA 214

Query: 122 HDMMTT 127
            +M  T
Sbjct: 215 DEMAAT 220


>gi|197122909|ref|YP_002134860.1| flagellar basal-body rod protein FlgG [Anaeromyxobacter sp. K]
 gi|220917701|ref|YP_002493005.1| flagellar basal-body rod protein FlgG [Anaeromyxobacter
           dehalogenans 2CP-1]
 gi|196172758|gb|ACG73731.1| flagellar basal-body rod protein FlgG [Anaeromyxobacter sp. K]
 gi|219955555|gb|ACL65939.1| flagellar basal-body rod protein FlgG [Anaeromyxobacter
           dehalogenans 2CP-1]
          Length = 266

 Score = 63.0 bits (151), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 27/77 (35%)

Query: 55  MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
           +  +GG  + +                    A G ++  NV  + E  DM  T R Y  N
Sbjct: 189 LEAAGGNLLLQTAASGEAVDARPGEQGAGTLAQGFLEGANVKAVEEMIDMIATQRAYELN 248

Query: 115 LQTIKQSHDMMTTTLDL 131
            + ++ +  M+     L
Sbjct: 249 SRVVQTADQMLQRLTSL 265



 Score = 46.0 bits (107), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 22/42 (52%)

Query: 3  YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
           ++ S + A +G+  Q  RM +I+ N+AN  TTG       +
Sbjct: 5  PVLRSLYTAATGMEAQQLRMDVIANNLANTGTTGFKRQRAEF 46


>gi|86157777|ref|YP_464562.1| flagellar basal-body rod FlgG [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85774288|gb|ABC81125.1| flagellar basal-body rod FlgG [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 266

 Score = 63.0 bits (151), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 27/77 (35%)

Query: 55  MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
           +  +GG  + +                    A G ++  NV  + E  DM  T R Y  N
Sbjct: 189 LEAAGGNLLLQTAASGEAVDARPGEQGAGTLAQGFLEGANVKAVEEMIDMIATQRAYELN 248

Query: 115 LQTIKQSHDMMTTTLDL 131
            + ++ +  M+     L
Sbjct: 249 SRVVQTADQMLQRLTSL 265



 Score = 46.8 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 22/43 (51%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
            ++ S + A +G+  Q  RM +I+ N+AN  TTG       +
Sbjct: 4  SPVLRSLYTAATGMEAQQLRMDVIANNLANTGTTGFKRQRAEF 46


>gi|225850267|ref|YP_002730501.1| flagellar basal body and hook protein FlgE [Persephonella marina
           EX-H1]
 gi|225644919|gb|ACO03105.1| flagellar basal body and hook protein FlgE [Persephonella marina
           EX-H1]
          Length = 540

 Score = 63.0 bits (151), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 25/48 (52%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             G ++  NV++  E  ++    R Y AN +TI  S  ++  T+++ R
Sbjct: 493 RGGFLELSNVDISREFINLITAQRAYQANARTITTSDQVLQETMNIKR 540



 Score = 37.2 bits (84), Expect = 0.80,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 20/41 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I S +  N+GL      + +IS+NIAN  T G       +
Sbjct: 1  MIQSFYTGNAGLNANKNWLSVISDNIANVNTIGFKAERVNF 41


>gi|257457574|ref|ZP_05622741.1| flagellar basal-body rod protein FlgG [Treponema vincentii ATCC
           35580]
 gi|257444960|gb|EEV20036.1| flagellar basal-body rod protein FlgG [Treponema vincentii ATCC
           35580]
          Length = 264

 Score = 63.0 bits (151), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 23/45 (51%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NV+ + E  +M    R Y  N + I+ S +M+ T + L R
Sbjct: 220 FLEMSNVSTVSEMVNMIVAQRAYEFNSKAIQTSDNMLGTAVGLKR 264



 Score = 42.6 bits (98), Expect = 0.019,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 20/41 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          ++ S   A +G+  Q A +  ++ N+AN  T+G       +
Sbjct: 1  MVRSLWTAATGMNSQQANIDTVANNLANVNTSGFKKQRAEF 41


>gi|91776311|ref|YP_546067.1| flagellar basal-body rod FlgG [Methylobacillus flagellatus KT]
 gi|91710298|gb|ABE50226.1| Flagellar basal-body rod FlgG [Methylobacillus flagellatus KT]
          Length = 261

 Score = 63.0 bits (151), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 19/126 (15%), Positives = 38/126 (30%), Gaps = 2/126 (1%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
            +  +  + L++   R   +S  +       +      ++  T      +   G     +
Sbjct: 138 PAIIVPPNALSLTVGRDGTVSVVL--PDNPNNAVQIGTFQLATFINPAGLQSRGENLYIE 195

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
                   + +             ++  NVNV  E   M +T R Y  N + I  S  M+
Sbjct: 196 TAASGPANINQPGLNGTGLLVHQYLETSNVNVAEELVSMIQTQRAYEINSKAISTSDQML 255

Query: 126 TTTLDL 131
                L
Sbjct: 256 QRLSQL 261



 Score = 43.7 bits (101), Expect = 0.009,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 21/41 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I S  IA +GL  Q  +M +I+ N+AN  T G       +
Sbjct: 1  MIRSLWIAKTGLDAQQMQMDVIANNLANVSTNGFKKTRAVF 41


>gi|168335333|ref|ZP_02693429.1| hypothetical protein Epulo_09785 [Epulopiscium sp. 'N.t. morphotype
           B']
          Length = 270

 Score = 63.0 bits (151), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 26/72 (36%)

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
           V+  G        E          +G ++  NVN+  E  ++    R Y  N + I  + 
Sbjct: 199 VETAGSGVPLMESEXPTLTKSLLRAGYLEGSNVNIATEMVNLIVAQRAYELNSKAISTAD 258

Query: 123 DMMTTTLDLLRD 134
            M+   + L + 
Sbjct: 259 TMLGQAVQLKKS 270



 Score = 41.8 bits (96), Expect = 0.036,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 20/55 (36%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++ S   A +G+  Q   +  IS NIAN  T G    S  ++             
Sbjct: 1  MMRSLWTAATGMTSQQTHVDTISNNIANVNTVGFKQESVNFKTLLYQNMLPTQQE 55


>gi|319405421|emb|CBI79040.1| Flagellar hook protein FlgE [Bartonella sp. AR 15-3]
          Length = 402

 Score = 63.0 bits (151), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 24/129 (18%), Positives = 46/129 (35%), Gaps = 2/129 (1%)

Query: 7   SAHIANSGLAVQSARMQIISEN--IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           +      G+   +       +N  I    +   T         T++  E +   GG   +
Sbjct: 274 AFEAEADGMESGAFDGFTFGKNGEIEVMYSNQKTRIIGYVGMTTVASPESLTFLGGSVFE 333

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
                 +  +     G     +SG ++  NV++  E  DM E  R Y AN +  +   ++
Sbjct: 334 TNSQTGAQMMGRPGDGVFGTLSSGYLEDSNVDIGDELTDMIEAQRNYTANSKVFQTGSEL 393

Query: 125 MTTTLDLLR 133
           M   ++L R
Sbjct: 394 MDVIVNLKR 402



 Score = 41.0 bits (94), Expect = 0.051,   Method: Composition-based stats.
 Identities = 12/61 (19%), Positives = 24/61 (39%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            +        SG+  Q  R+  +++N+AN  T G    +  +        +  +  GGV
Sbjct: 1  MSIYGMMRTGVSGMNAQGTRLSGVADNVANVGTVGYKRTNVQFSNYVTPSGQYAYVPGGV 60

Query: 62 R 62
          +
Sbjct: 61 K 61


>gi|296274032|ref|YP_003656663.1| flagellar basal-body rod protein FlgG [Arcobacter nitrofigilis DSM
           7299]
 gi|296098206|gb|ADG94156.1| flagellar basal-body rod protein FlgG [Arcobacter nitrofigilis DSM
           7299]
          Length = 263

 Score = 63.0 bits (151), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 16/117 (13%), Positives = 34/117 (29%), Gaps = 2/117 (1%)

Query: 20  ARMQIISENIANARTTGDTPGSDPYRRK--TISFEEVMHGSGGVRVKKIGVDQSTFVEEF 77
            ++ I ++ +  A         +  +           +   G    +             
Sbjct: 147 TKINISNDGLITATDPTTQEEQEVGQITLSDFVNPAGLAPMGESLFRATTASGDPIDANP 206

Query: 78  DPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
                     G V+  NV ++ E  D+    R Y AN + I+ +  ++T    L   
Sbjct: 207 TEEQFGNLRQGFVEMSNVKLVSEMVDLITAQRAYEANSKAIQTADKLLTIANQLKTS 263



 Score = 39.5 bits (90), Expect = 0.15,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 19/41 (46%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I   + A SG+  Q  ++ + S NI+N  T G       +
Sbjct: 1  MIKGMYTAASGMYAQQHQIDVTSNNISNVNTAGFKKDRAEF 41


>gi|332800000|ref|YP_004461499.1| flagellar basal-body rod protein FlgG [Tepidanaerobacter sp. Re1]
 gi|332697735|gb|AEE92192.1| flagellar basal-body rod protein FlgG [Tepidanaerobacter sp. Re1]
          Length = 270

 Score = 63.0 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 40/105 (38%), Gaps = 6/105 (5%)

Query: 35  TGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANA------SG 88
           TG            I   + ++  G + +     + +    E+ P   V++        G
Sbjct: 166 TGQDEDGTIEELGQIGIVKFLNPQGLLAIGNNLFEATEASGEYVPMEDVSDPGYGTLLQG 225

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NV V+ E  ++    R Y  N + ++ S +M+    +L R
Sbjct: 226 FLEMSNVQVVEEMVNLIIAQRAYEVNTKAVQASDEMLAQANNLRR 270



 Score = 44.9 bits (104), Expect = 0.004,   Method: Composition-based stats.
 Identities = 13/65 (20%), Positives = 24/65 (36%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ +   A+SG+  Q   M I S N+AN  T G       ++       +       +  
Sbjct: 1  MMRALWSASSGMQAQQLNMDITSNNLANVNTAGFKKSRAEFKDLLYETLQRPDSPELLSG 60

Query: 64 KKIGV 68
            + V
Sbjct: 61 AAVPV 65


>gi|222147375|ref|YP_002548332.1| flagellar hook protein FlgE [Agrobacterium vitis S4]
 gi|221734365|gb|ACM35328.1| flagellar hook protein [Agrobacterium vitis S4]
          Length = 411

 Score = 63.0 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 23/105 (21%), Positives = 44/105 (41%)

Query: 29  IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASG 88
           I+   + G T  +      T++  + +   GG   K      +  V     G      S 
Sbjct: 307 ISTVSSDGTTTDTYKIALATVASPDNLEEVGGTAYKVDADSGTVVVGFAGTGSFGTIESS 366

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NV++  E +DM    R Y AN +  + + DM+ T ++++R
Sbjct: 367 TLESSNVDLASELSDMIAAQRAYSANSKVFQTAADMLDTVINMVR 411



 Score = 37.9 bits (86), Expect = 0.46,   Method: Composition-based stats.
 Identities = 14/71 (19%), Positives = 25/71 (35%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            L ++ + + SGL  QS ++  I +NI+N  TTG       +                 
Sbjct: 1  MSLASAMNSSVSGLTAQSNKLTSIGDNISNTSTTGYKGTETAFSSLVNGGTTSTTTQTVS 60

Query: 62 RVKKIGVDQST 72
          +   +    S 
Sbjct: 61 QSGDLESTSSE 71


>gi|312621577|ref|YP_004023190.1| fagellar hook-basal body protein [Caldicellulosiruptor
           kronotskyensis 2002]
 gi|312202044|gb|ADQ45371.1| fagellar hook-basal body protein [Caldicellulosiruptor
           kronotskyensis 2002]
          Length = 488

 Score = 62.6 bits (150), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/135 (17%), Positives = 46/135 (34%), Gaps = 5/135 (3%)

Query: 3   YLIASAHIAN----SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
            + +S  +A     S  ++Q   +   S  I    + G           T +    +   
Sbjct: 355 NMESSIRVAQMTGYSAGSLQGFNVDA-SGKITGVYSNGLNQLIGQIAIATFANPAGLQRI 413

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
           G              +     G     + G ++  NV++  E  DM  T R Y AN + I
Sbjct: 414 GDNLYINTVNSGDPEIGTPGSGSRGTISQGTLEMSNVDLAKEFTDMIVTQRGYQANARVI 473

Query: 119 KQSHDMMTTTLDLLR 133
             S +++   +++ R
Sbjct: 474 TASDELLQDLVNIKR 488



 Score = 41.8 bits (96), Expect = 0.031,   Method: Composition-based stats.
 Identities = 20/74 (27%), Positives = 30/74 (40%), Gaps = 6/74 (8%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR------RKTISFEEVMHG 57
          ++ S   + S L     RM +I +NIAN  T G       +        K+ S  +   G
Sbjct: 1  MMRSMFSSISALRAHQTRMDVIGDNIANVNTVGFKSSRVTFASVFASVLKSASAPDTASG 60

Query: 58 SGGVRVKKIGVDQS 71
           GG    +IG+  S
Sbjct: 61 RGGSNPMQIGLGVS 74


>gi|124268252|ref|YP_001022256.1| flagellar basal body and hook protein [Methylibium petroleiphilum
           PM1]
 gi|124261027|gb|ABM96021.1| flagellar basal body and hook protein [Methylibium petroleiphilum
           PM1]
          Length = 260

 Score = 62.6 bits (150), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 29/83 (34%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +   G     +     +      D     A A G V+  NVNV+ E   M +T 
Sbjct: 178 FVNPAGLEPRGENLYTETAASGTPNAGAPDSNGLGAIAQGFVEGSNVNVVEELVAMIQTQ 237

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y  N + I+ S  M+     L
Sbjct: 238 RAYELNSKAIQTSDQMLQKLAQL 260



 Score = 40.6 bits (93), Expect = 0.072,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 21/41 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          ++ S  I+ +G+  Q  ++  IS N+AN+ T G       +
Sbjct: 1  MMRSLWISKTGMEAQQTQLDHISHNLANSATNGYKRSHAVF 41


>gi|312126828|ref|YP_003991702.1| fagellar hook-basal body protein [Caldicellulosiruptor
           hydrothermalis 108]
 gi|311776847|gb|ADQ06333.1| fagellar hook-basal body protein [Caldicellulosiruptor
           hydrothermalis 108]
          Length = 486

 Score = 62.6 bits (150), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/135 (17%), Positives = 46/135 (34%), Gaps = 5/135 (3%)

Query: 3   YLIASAHIAN----SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
            + +S  +A     S  ++Q   +   S  I    + G           T +    +   
Sbjct: 353 NMESSIRVAQMTGYSAGSLQGFNVDA-SGKITGVYSNGLNQLIGQIAIATFANPAGLQRI 411

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
           G              +     G     + G ++  NV++  E  DM  T R Y AN + I
Sbjct: 412 GDNLYINTVNSGDPEIGTPGSGSRGTISQGTLEMSNVDLAKEFTDMIVTQRGYQANARVI 471

Query: 119 KQSHDMMTTTLDLLR 133
             S +++   +++ R
Sbjct: 472 TASDELLQDLVNIKR 486



 Score = 41.8 bits (96), Expect = 0.032,   Method: Composition-based stats.
 Identities = 20/74 (27%), Positives = 30/74 (40%), Gaps = 6/74 (8%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR------RKTISFEEVMHG 57
          ++ S   + S L     RM +I +NIAN  T G       +        K+ S  +   G
Sbjct: 1  MMRSMFSSISALRAHQTRMDVIGDNIANVNTVGFKSSRVTFASVFASVLKSASAPDTASG 60

Query: 58 SGGVRVKKIGVDQS 71
           GG    +IG+  S
Sbjct: 61 RGGSNPMQIGLGVS 74


>gi|289548122|ref|YP_003473110.1| fagellar hook-basal body protein [Thermocrinis albus DSM 14484]
 gi|289181739|gb|ADC88983.1| fagellar hook-basal body protein [Thermocrinis albus DSM 14484]
          Length = 454

 Score = 62.6 bits (150), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 31/60 (51%)

Query: 74  VEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
                PG      SG+++  NV++  E  ++    R Y AN +TI  ++ ++  T++L+R
Sbjct: 395 PTVMVPGGAEKVRSGMLEMSNVDIATEFVNLISAQRAYQANAKTITATNAVLDETVNLVR 454



 Score = 40.6 bits (93), Expect = 0.063,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 19/42 (45%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S   A +GL      M I S+N+AN  T G       ++
Sbjct: 1  MLRSFFNAVTGLNAYRTWMDITSDNLANVNTIGFKASRPIFQ 42


>gi|158321569|ref|YP_001514076.1| hypothetical protein Clos_2549 [Alkaliphilus oremlandii OhILAs]
 gi|158141768|gb|ABW20080.1| protein of unknown function DUF1078 domain protein [Alkaliphilus
           oremlandii OhILAs]
          Length = 264

 Score = 62.6 bits (150), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 17/112 (15%), Positives = 34/112 (30%)

Query: 22  MQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGH 81
           + + +  +  A T                       + G  + K  V     V   +   
Sbjct: 153 ITVNANGLITAETEDGEIEEIATIALANFINPEGLLAVGKNLYKETVASGEAVFMEEEAR 212

Query: 82  PVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
                   ++  NV ++ E   +    R Y  N + I+ S +M+    +L R
Sbjct: 213 TSDIVQNYLETSNVQIVDEMVRLITAQRAYEINSKAIQTSDEMLGIANNLRR 264



 Score = 44.5 bits (103), Expect = 0.005,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 22/58 (37%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
          + +   A SG+  Q   M  IS N+AN  TTG       ++    +     +   G  
Sbjct: 1  MRALWTAASGMKAQQLNMDTISNNLANVNTTGYKKQKVEFKDLLYANMRTTNLVDGEG 58


>gi|91975157|ref|YP_567816.1| putative flagellar basal-body rod protein flgC [Rhodopseudomonas
           palustris BisB5]
 gi|91681613|gb|ABE37915.1| putative flagellar basal-body rod protein flgC [Rhodopseudomonas
           palustris BisB5]
          Length = 136

 Score = 62.6 bits (150), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/134 (26%), Positives = 55/134 (41%), Gaps = 8/134 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANART-------TGDTPGSDPYRRKTISFEEVMH 56
           + + A IA SG+   + R+++ + N+AN ++        G  P   P   + +   +   
Sbjct: 1   MTSIASIAVSGMNAATRRLEVSASNVANQQSTGALPAANGAVPAGAPQAYRPLQVNQTAV 60

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
             GG +       Q   V   DP  P AN  G V  PNV++  E          Y ANL 
Sbjct: 61  AGGGTQTTVSATSQGA-VAISDPQAPFANQDGQVAAPNVDLAQEFIGQLVARYSYTANLA 119

Query: 117 TIKQSHDMMTTTLD 130
           ++K   DM    LD
Sbjct: 120 SLKADRDMSKALLD 133


>gi|291276427|ref|YP_003516199.1| flagellar basal-body rod protein [Helicobacter mustelae 12198]
 gi|290963621|emb|CBG39453.1| flagellar basal-body rod protein [Helicobacter mustelae 12198]
          Length = 262

 Score = 62.6 bits (150), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 20/131 (15%), Positives = 36/131 (27%), Gaps = 3/131 (2%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            LI    +      +       +S         G +                +H  G   
Sbjct: 135 ALIPQITVPQDATQINIGNDGTVS---VVQGNNGGSNTIGQIELADFINPAGLHSLGDNL 191

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
                   +                G ++  NV ++ E  D+    R Y AN ++I+ + 
Sbjct: 192 YLNTSASGAPITGVAGTNGMGQIKQGFLELSNVRLVEEMTDLITGQRAYEANSKSIQTAD 251

Query: 123 DMMTTTLDLLR 133
            M+ T   L R
Sbjct: 252 AMLQTVNGLKR 262



 Score = 36.8 bits (83), Expect = 0.91,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 19/41 (46%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          ++ S + A +G+  Q  ++   S NIAN  T G       +
Sbjct: 1  MMRSLYSATTGMLGQQLQIDTTSNNIANVNTVGYKRQRAEF 41


>gi|225849153|ref|YP_002729317.1| flagellar hook protein FlgE [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225643172|gb|ACN98222.1| flagellar hook protein FlgE [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 409

 Score = 62.6 bits (150), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 23/48 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            SG ++  NV++  E  ++    R Y AN + I     ++   +++ R
Sbjct: 362 RSGFLELSNVDISKEFINLITAQRAYQANARVITTDDQILQEAMNIKR 409



 Score = 39.9 bits (91), Expect = 0.13,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 20/41 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          ++ S + A SGL      + +IS+NIAN  T G       +
Sbjct: 1  MLQSFYTAVSGLNGNQKWIDVISDNIANVNTIGFKSERVTF 41


>gi|242280467|ref|YP_002992596.1| hypothetical protein Desal_3005 [Desulfovibrio salexigens DSM 2638]
 gi|242123361|gb|ACS81057.1| protein of unknown function DUF1078 domain protein [Desulfovibrio
           salexigens DSM 2638]
          Length = 549

 Score = 62.6 bits (150), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 32/85 (37%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            + +  +   GG    +            +     + AS  ++  NV++ VE   M  T 
Sbjct: 465 FNNDWGLRREGGNLFTQTRESGDALTGLPNSSGKGSIASNSLEMSNVDLAVEFVSMITTQ 524

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R + AN + I  +  MM   + L R
Sbjct: 525 RGFQANSKVITTTDSMMGELIQLKR 549



 Score = 33.7 bits (75), Expect = 9.5,   Method: Composition-based stats.
 Identities = 19/72 (26%), Positives = 26/72 (36%), Gaps = 4/72 (5%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPG----SDPYRRKTISFEEVMHG 57
            L AS     +GL     +M ++  NIAN  T G         D   +   +   V   
Sbjct: 1  MGLSASLFSGITGLQAHGDKMSVLGNNIANVNTVGFKSAKMHFEDAISQDMSTATGVAQV 60

Query: 58 SGGVRVKKIGVD 69
            GV+V  I  D
Sbjct: 61 GRGVQVGAIYAD 72


>gi|73539452|ref|YP_299819.1| flagellar basal body rod protein FlgG [Ralstonia eutropha JMP134]
 gi|72122789|gb|AAZ64975.1| Protein of unknown function DUF1078 [Ralstonia eutropha JMP134]
          Length = 261

 Score = 62.6 bits (150), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/131 (18%), Positives = 43/131 (32%), Gaps = 7/131 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +  +  I  +  ++  AR   +S         G +      + +  +F            
Sbjct: 136 IQPAITIPANTTSMTVARDGTVS-----VTQPGSSNNVQVGQLQLATFMNPAGLESMGEN 190

Query: 64  KKIGVDQSTFVEEFDPGHPVAN--ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
             +  D S       PG   A       V+  NVNV+ E   M +T R Y  N + ++ S
Sbjct: 191 LYVQTDASGAPNTTVPGLNGAGVLQQNYVEASNVNVVEELVSMIQTQRAYEINSKAVQTS 250

Query: 122 HDMMTTTLDLL 132
             M+     + 
Sbjct: 251 DQMLQRLTQMG 261



 Score = 42.9 bits (99), Expect = 0.015,   Method: Composition-based stats.
 Identities = 16/41 (39%), Positives = 22/41 (53%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I S  IA +GL  Q  +M +IS N+AN  T G   G   +
Sbjct: 1  MIRSLWIAKTGLDAQQTQMDVISNNLANVSTNGFKRGRAVF 41


>gi|292669970|ref|ZP_06603396.1| flagellar basal-body rod protein FlgG [Selenomonas noxia ATCC
           43541]
 gi|292648382|gb|EFF66354.1| flagellar basal-body rod protein FlgG [Selenomonas noxia ATCC
           43541]
          Length = 275

 Score = 62.6 bits (150), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/102 (21%), Positives = 37/102 (36%), Gaps = 2/102 (1%)

Query: 34  TTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANA--SGIVK 91
             G T   +  +     F      +   +   +  D S    E +PG   A     G ++
Sbjct: 174 EAGQTQQQEAGQITLARFVNPAGLTAIGKNLFVVSDASGEAIESNPGVDGAGTLTQGTLE 233

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             NV ++ E  +M  + R Y +N + I  S  M+     L R
Sbjct: 234 MSNVQIVEEMVNMIVSQRAYESNSKAITTSDSMLEIANTLKR 275



 Score = 36.4 bits (82), Expect = 1.3,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 21/42 (50%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          +    +IA SG+  ++    +I+ N+ANA TTG        R
Sbjct: 1  MWRGLYIAASGMITETKHTDMIANNLANAATTGYKRDDMAIR 42


>gi|222530130|ref|YP_002574012.1| hypothetical protein Athe_2164 [Caldicellulosiruptor bescii DSM
           6725]
 gi|222456977|gb|ACM61239.1| protein of unknown function DUF1078 domain protein
           [Caldicellulosiruptor bescii DSM 6725]
          Length = 488

 Score = 62.6 bits (150), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/135 (17%), Positives = 46/135 (34%), Gaps = 5/135 (3%)

Query: 3   YLIASAHIAN----SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
            + +S  +A     S  ++Q   +   S  I    + G           T +    +   
Sbjct: 355 NMESSIRVAQMTGYSAGSLQGFNVDA-SGKITGVYSNGLNQLIGQIAIATFANPAGLQRI 413

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
           G              +     G     + G ++  NV++  E  DM  T R Y AN + I
Sbjct: 414 GDNLYINTVNSGDPEIGTPGSGSRGTISQGTLEMSNVDLAKEFTDMIVTQRGYQANARVI 473

Query: 119 KQSHDMMTTTLDLLR 133
             S +++   +++ R
Sbjct: 474 TASDELLQDLVNIKR 488



 Score = 41.8 bits (96), Expect = 0.035,   Method: Composition-based stats.
 Identities = 20/74 (27%), Positives = 30/74 (40%), Gaps = 6/74 (8%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR------RKTISFEEVMHG 57
          ++ S   + S L     RM +I +NIAN  T G       +        K+ S  +   G
Sbjct: 1  MMRSMFSSISALRAHQTRMDVIGDNIANVNTVGFKSSRVTFASVFASVLKSASAPDTASG 60

Query: 58 SGGVRVKKIGVDQS 71
           GG    +IG+  S
Sbjct: 61 RGGSNPMQIGLGVS 74


>gi|319898656|ref|YP_004158749.1| flagellar hook protein FlgE [Bartonella clarridgeiae 73]
 gi|319402620|emb|CBI76165.1| Flagellar hook protein FlgE [Bartonella clarridgeiae 73]
          Length = 402

 Score = 62.6 bits (150), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/129 (18%), Positives = 46/129 (35%), Gaps = 2/129 (1%)

Query: 7   SAHIANSGLAVQSARMQIISEN--IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           +      G+   +       +N  I    +   T         T++  E +   GG   +
Sbjct: 274 AFEAEADGMESGAFDGFTFGKNGEIEVMYSNQKTRIVGYVGITTVASPESLTFLGGSVFE 333

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
                 +  +     G     +SG ++  NV++  E  DM E  R Y AN +  +   ++
Sbjct: 334 TNSQTGAQMMGRPGDGVFGTLSSGYLEDSNVDMGDELTDMIEAQRNYTANSKVFQTGSEL 393

Query: 125 MTTTLDLLR 133
           M   ++L R
Sbjct: 394 MDVIVNLKR 402



 Score = 42.2 bits (97), Expect = 0.027,   Method: Composition-based stats.
 Identities = 13/61 (21%), Positives = 25/61 (40%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            +        SG+  Q  R+  +++N+ANA T G    +  +        +  +  GGV
Sbjct: 1  MGIYGMMRTGVSGMNAQGTRLSGVADNVANAGTVGYKRTNVQFSNYVTPSGQYAYVPGGV 60

Query: 62 R 62
          +
Sbjct: 61 K 61


>gi|148252489|ref|YP_001237074.1| putative flagellar basal-body rod protein (flgC) [Bradyrhizobium
           sp. BTAi1]
 gi|146404662|gb|ABQ33168.1| putative flagellar basal-body rod protein (flgC) [Bradyrhizobium
           sp. BTAi1]
          Length = 125

 Score = 62.6 bits (150), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/124 (22%), Positives = 51/124 (41%), Gaps = 6/124 (4%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPY------RRKTISFEEVMHGSGGVRVKKIGV 68
           +   + R+++ + N+ANAR+TG  P ++        +            +GG     I  
Sbjct: 1   MNAATRRLEVSASNVANARSTGALPDANGKLPAGAPKAYDPLELVQSDVAGGGTQTTITR 60

Query: 69  DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
                   ++P  P AN  G+V  PNV++  E          + AN + +K S +M    
Sbjct: 61  ASQGTSASYEPSAPFANKDGLVAAPNVDLAQEMISQLVAKYSFAANARVLKASDEMSRIV 120

Query: 129 LDLL 132
           +D+ 
Sbjct: 121 VDMK 124


>gi|160878402|ref|YP_001557370.1| hypothetical protein Cphy_0244 [Clostridium phytofermentans ISDg]
 gi|160427068|gb|ABX40631.1| protein of unknown function DUF1078 domain protein [Clostridium
           phytofermentans ISDg]
          Length = 271

 Score = 62.6 bits (150), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 20/126 (15%), Positives = 39/126 (30%), Gaps = 8/126 (6%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
            I+   +      M   + NIA                        +  +GG    +   
Sbjct: 153 DISKVTMDEYGNLMYPDANNIAQRTGIQ-------IGLTQFVNPAGLEKAGGSLFYETES 205

Query: 69  DQSTFVEEFDPGHPVANA-SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
             +   E  +     +   +G ++  NV    E  ++  T R Y  N + I  + +M+  
Sbjct: 206 SGAPLKEVENNNLKQSKIHTGYLEASNVQTADEIVNLIVTQRAYEMNSKVITAADEMLQQ 265

Query: 128 TLDLLR 133
             +L R
Sbjct: 266 ANNLRR 271



 Score = 41.0 bits (94), Expect = 0.052,   Method: Composition-based stats.
 Identities = 13/74 (17%), Positives = 26/74 (35%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ +     SG+  Q   +  IS N++N  T G    +  +     S  +        +V
Sbjct: 1  MMRALWTGASGMISQQTSLDTISNNLSNINTAGYKKENAQFSSLLYSKIQSKVTDSEGKV 60

Query: 64 KKIGVDQSTFVEEF 77
          K +     + V   
Sbjct: 61 KPVIGQVGSGVRVT 74


>gi|242238971|ref|YP_002987152.1| flagellar basal-body rod protein FlgG [Dickeya dadantii Ech703]
 gi|242131028|gb|ACS85330.1| flagellar basal-body rod protein FlgG [Dickeya dadantii Ech703]
          Length = 260

 Score = 62.6 bits (150), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 19/126 (15%), Positives = 36/126 (28%), Gaps = 3/126 (2%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
            +  I  +   +  AR   +S  +   +    +         T      +   G    ++
Sbjct: 138 PAITIPTTAQTMTVARDGTVSVTL---QGQTASTQVGQLTLSTFINPAGLQSLGENLYQE 194

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
                +                G V+  NVNV  E   M +  R Y  N + +  S  M+
Sbjct: 195 TQSSGAPTQSTPGQNGAGVLYQGYVETSNVNVAEELVSMIQVQRAYEINSKAVSTSDSML 254

Query: 126 TTTLDL 131
                +
Sbjct: 255 QRLTQI 260



 Score = 43.3 bits (100), Expect = 0.012,   Method: Composition-based stats.
 Identities = 15/41 (36%), Positives = 20/41 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I S  IA +GL  Q   M +IS N+AN  T G       +
Sbjct: 1  MIRSLWIAKTGLDAQQTNMDVISNNLANVSTNGFKRQRAVF 41


>gi|315657509|ref|ZP_07910391.1| flagellar hook protein FlgE [Mobiluncus curtisii subsp. holmesii
           ATCC 35242]
 gi|315491981|gb|EFU81590.1| flagellar hook protein FlgE [Mobiluncus curtisii subsp. holmesii
           ATCC 35242]
          Length = 484

 Score = 62.6 bits (150), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 15/79 (18%), Positives = 34/79 (43%)

Query: 55  MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
           +  +G     + G      + E   G   A   G ++  NV++  E  ++  + R + AN
Sbjct: 406 LEKAGSSYFVETGNSGQPQIGEAGTGQRGAMTGGAIEMSNVDLAAEFTNLILSQRGFQAN 465

Query: 115 LQTIKQSHDMMTTTLDLLR 133
            + I  S +++   +++ R
Sbjct: 466 SRVITTSDEILQELVNMKR 484



 Score = 37.9 bits (86), Expect = 0.46,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 29/69 (42%), Gaps = 5/69 (7%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY-----RRKTISFEEVMHGS 58
          ++ S     SGL+V    + + S NIAN  TTG    S  +     +         ++  
Sbjct: 1  MLRSLFTGISGLSVHQTMLDVTSNNIANVNTTGFKSASTRFEDTFSQLVRSGAAPRLNER 60

Query: 59 GGVRVKKIG 67
          GG+   ++G
Sbjct: 61 GGMNPAQVG 69


>gi|95929874|ref|ZP_01312615.1| Flagellar basal-body rod FlgG [Desulfuromonas acetoxidans DSM 684]
 gi|95134170|gb|EAT15828.1| Flagellar basal-body rod FlgG [Desulfuromonas acetoxidans DSM 684]
          Length = 261

 Score = 62.6 bits (150), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 16/99 (16%), Positives = 31/99 (31%)

Query: 33  RTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKY 92
                +           S E  +   G     +                    + G ++ 
Sbjct: 162 DGESTSTEIGVIEMAIFSNESGLRSLGRNLFAETLSSGVANTGIPGENGLGTLSQGYLEG 221

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV+V+ E  +M    R Y  N + I+ + +M+  T +L
Sbjct: 222 SNVSVMEEMVNMIAGQRAYEVNSKAIQTADEMLQMTNNL 260



 Score = 41.0 bits (94), Expect = 0.051,   Method: Composition-based stats.
 Identities = 11/62 (17%), Positives = 23/62 (37%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I +   A +G+  Q   + +I+ N+AN  T+G       ++       +    S     
Sbjct: 1  MIRALWTAATGMDSQQTNIDVIANNLANVNTSGFKKSRADFQELLYQVSKTPGSSTSADT 60

Query: 64 KK 65
            
Sbjct: 61 VS 62


>gi|117926379|ref|YP_866996.1| flagellar basal-body rod protein FlgG [Magnetococcus sp. MC-1]
 gi|117610135|gb|ABK45590.1| flagellar basal-body rod protein FlgG [Magnetococcus sp. MC-1]
          Length = 263

 Score = 62.6 bits (150), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 15/86 (17%), Positives = 31/86 (36%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                  ++  G     + G   +  V               ++  NVN++ E  +M  +
Sbjct: 178 QFINPAGLNAIGRNLYTESGASGAPVVGTAGEDGLGTVQQQYLELSNVNMVEEMVNMIAS 237

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y  N +T++ + DM+     + R
Sbjct: 238 QRAYEINSKTVQTADDMLGKVASMKR 263



 Score = 41.8 bits (96), Expect = 0.032,   Method: Composition-based stats.
 Identities = 10/65 (15%), Positives = 24/65 (36%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I +   + +G+  Q   + +I+ N+AN  T G       ++            +     
Sbjct: 1  MIRALWTSATGMQAQQTNIDVIANNLANTNTAGFKRSRADFQDLLYQNMRAAGAATSQAG 60

Query: 64 KKIGV 68
           ++ V
Sbjct: 61 NQVPV 65


>gi|303239789|ref|ZP_07326313.1| fagellar hook-basal body protein [Acetivibrio cellulolyticus CD2]
 gi|302592726|gb|EFL62450.1| fagellar hook-basal body protein [Acetivibrio cellulolyticus CD2]
          Length = 265

 Score = 62.6 bits (150), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 28/77 (36%)

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
            S G  +          V++ + G         ++  NV V+ E   +    R Y  N +
Sbjct: 189 ESMGSNLYASNSASGEAVQDAEMGTVSNVKQYYIESSNVQVVEEMVKLIVAQRAYEINSK 248

Query: 117 TIKQSHDMMTTTLDLLR 133
            ++ + DM+     L R
Sbjct: 249 AVQTADDMLGIANSLKR 265



 Score = 43.3 bits (100), Expect = 0.010,   Method: Composition-based stats.
 Identities = 11/59 (18%), Positives = 21/59 (35%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
          ++ +   A SG+  Q   + +IS N++N  TT        ++              G  
Sbjct: 1  MMRALWTAGSGMTAQQLSVDVISNNLSNVNTTAYKKERVEFKDMLYETLNRASVMDGDG 59


>gi|51246516|ref|YP_066400.1| flagellar hook protein (FlgE) [Desulfotalea psychrophila LSv54]
 gi|50877553|emb|CAG37393.1| related to flagellar hook protein (FlgE) [Desulfotalea psychrophila
           LSv54]
          Length = 566

 Score = 62.6 bits (150), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 19/106 (17%), Positives = 34/106 (32%), Gaps = 1/106 (0%)

Query: 28  NIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANAS 87
           N+  A + G                  +   G       G   +  V    P       +
Sbjct: 462 NVIAAYSNGKNRNIAAISLAKFQNPAGLTMEGNNLFAATGTSGAPRVGLPGPELGKVFTN 521

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             ++  NV++ VE   M    R Y AN + I    +++   ++L R
Sbjct: 522 S-LEQSNVDMSVEFVRMITIQRGYQANSKIITTVDELLGELINLKR 566


>gi|269796390|ref|YP_003315845.1| flagellar hook protein FlgE [Sanguibacter keddieii DSM 10542]
 gi|269098575|gb|ACZ23011.1| flagellar hook protein FlgE [Sanguibacter keddieii DSM 10542]
          Length = 394

 Score = 62.2 bits (149), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 31/79 (39%)

Query: 55  MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
           +  +GG             +     G   +   G ++  NV++  E  ++    R + AN
Sbjct: 316 LEKAGGSLYTTTVNSGEAAIGTAGTGGRGSLVGGALEMSNVDLSQEFTNLIIAQRGFQAN 375

Query: 115 LQTIKQSHDMMTTTLDLLR 133
            + I  S +++   ++L R
Sbjct: 376 SRVITTSDELLQELVNLKR 394


>gi|163733143|ref|ZP_02140587.1| flagellar basal-body rod protein FlgG [Roseobacter litoralis Och
           149]
 gi|161393678|gb|EDQ18003.1| flagellar basal-body rod protein FlgG [Roseobacter litoralis Och
           149]
          Length = 246

 Score = 62.2 bits (149), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 18/116 (15%), Positives = 36/116 (31%)

Query: 16  AVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVE 75
             +S  +    E  A      D      +     +  + +   GG    +     +  V 
Sbjct: 130 DARSISINTSGEVFAYFSDATDAELLGQFNMAGFTNAKGLEALGGNLFAETEASGAAIVS 189

Query: 76  EFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
                       G ++  +V+ + E  ++ E  R Y  N + I  +  MM  T  +
Sbjct: 190 TPGEDGLGTVRQGYLESSSVDAVREITELIEAQRGYEMNAKVISAADQMMGATTQI 245


>gi|322806995|emb|CBZ04565.1| flagellar basal-body rod protein FlgC [Clostridium botulinum H04402
           065]
          Length = 67

 Score = 62.2 bits (149), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 25/66 (37%), Positives = 34/66 (51%)

Query: 68  VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
            D S   + +DP HP A+  G V  PNVNVL E ADM  + R Y AN+  +     M   
Sbjct: 2   EDPSPVRKMYDPSHPDADEEGYVSMPNVNVLNEMADMMASVRTYEANVTVMNAEKSMFGK 61

Query: 128 TLDLLR 133
            L++ +
Sbjct: 62  ALEIGK 67


>gi|302872562|ref|YP_003841198.1| fagellar hook-basal body protein [Caldicellulosiruptor obsidiansis
           OB47]
 gi|302575421|gb|ADL43212.1| fagellar hook-basal body protein [Caldicellulosiruptor obsidiansis
           OB47]
          Length = 489

 Score = 62.2 bits (149), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 17/86 (19%), Positives = 32/86 (37%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
           T +    +   G              +     G     + G ++  NV++  E  DM  T
Sbjct: 404 TFANPAGLQRIGDNLYINTVNSGDPEIGTPGSGSRGTISQGTLEMSNVDLAKEFTDMIVT 463

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y AN + I  S +++   +++ R
Sbjct: 464 QRGYQANARVITASDELLQDLVNIKR 489



 Score = 42.2 bits (97), Expect = 0.026,   Method: Composition-based stats.
 Identities = 20/74 (27%), Positives = 30/74 (40%), Gaps = 6/74 (8%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR------RKTISFEEVMHG 57
          ++ S   + S L     RM +I +NIAN  T G       +        K+ S  +   G
Sbjct: 1  MMRSMFSSISALRAHQTRMDVIGDNIANVNTVGFKSSRVTFASVFASVLKSASAPDTASG 60

Query: 58 SGGVRVKKIGVDQS 71
           GG    +IG+  S
Sbjct: 61 RGGSNPMQIGLGVS 74


>gi|315185553|gb|EFU19322.1| fagellar hook-basal body protein [Spirochaeta thermophila DSM 6578]
          Length = 269

 Score = 62.2 bits (149), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 24/57 (42%)

Query: 74  VEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             E           G ++  NVN + E   M E NR Y AN +TI+    ++   ++
Sbjct: 208 EAEILQDGRPKVRQGFLEGSNVNPVTEMVQMIEVNRAYEANQKTIETQDSLLGRLIN 264


>gi|313682110|ref|YP_004059848.1| flagellar basal-body rod protein flgg [Sulfuricurvum kujiense DSM
           16994]
 gi|313154970|gb|ADR33648.1| flagellar basal-body rod protein FlgG [Sulfuricurvum kujiense DSM
           16994]
          Length = 262

 Score = 62.2 bits (149), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 29/85 (34%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +H  G     +                      G V+  NV ++VE  D+    
Sbjct: 178 FINPAGLHAMGDNLFVETDSSGQPIEGTPGENGIGNIRQGFVELSNVQLVVELTDLITGQ 237

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R Y AN + I  S +M+ TT  L R
Sbjct: 238 RAYDANSKVITTSDEMLATTNGLKR 262



 Score = 36.8 bits (83), Expect = 1.1,   Method: Composition-based stats.
 Identities = 10/62 (16%), Positives = 21/62 (33%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ S + +++G+     ++   + NIAN  T G       +             S     
Sbjct: 1  MMQSLYTSSTGMLSMQTQIDTTANNIANVNTMGYKKSRAEFADLMYKVMTYAGTSTSDTT 60

Query: 64 KK 65
          K 
Sbjct: 61 KS 62


>gi|150390478|ref|YP_001320527.1| hypothetical protein Amet_2716 [Alkaliphilus metalliredigens QYMF]
 gi|149950340|gb|ABR48868.1| protein of unknown function DUF1078 domain protein [Alkaliphilus
           metalliredigens QYMF]
          Length = 441

 Score = 62.2 bits (149), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 30/85 (35%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +   G    +         V     G       G ++  NV++  E  +M  T 
Sbjct: 357 FRNPAGLEKIGENMYRNSPNSGEPLVGTPGSGGRGTLNPGTLEMSNVDLSREFTNMITTQ 416

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R + AN + I  S +M+   +++ R
Sbjct: 417 RGFQANSRIITTSDEMLQEVVNMKR 441



 Score = 46.0 bits (107), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/90 (20%), Positives = 29/90 (32%), Gaps = 6/90 (6%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ S   A SGL     RM  I  NIAN  T G          +    E       G   
Sbjct: 1  MMRSMFSAVSGLQAHQLRMDAIGNNIANVNTVG------YKGTRVTFQEVFSQTIRGAGA 54

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
           + G   +   +     +  + ++  V+  
Sbjct: 55 PQGGRGGTNPQQVGLGVNVASMSTFHVRGS 84


>gi|312135845|ref|YP_004003183.1| fagellar hook-basal body protein [Caldicellulosiruptor owensensis
           OL]
 gi|311775896|gb|ADQ05383.1| fagellar hook-basal body protein [Caldicellulosiruptor owensensis
           OL]
          Length = 489

 Score = 62.2 bits (149), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/135 (17%), Positives = 45/135 (33%), Gaps = 5/135 (3%)

Query: 3   YLIASAHIAN----SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
            + +S  +A     S   +Q   +   S  I    + G           T +    +   
Sbjct: 356 NMESSIRVAQMTGYSAGNLQGFNVDA-SGKITGVYSNGLNQLIGQIAVATFANPAGLQRI 414

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
           G              +     G     + G ++  NV++  E  DM  T R Y AN + I
Sbjct: 415 GDNLYINTVNSGDPEIGTPGSGSRGTISQGTLEMSNVDLAKEFTDMIVTQRGYQANARVI 474

Query: 119 KQSHDMMTTTLDLLR 133
             S +++   +++ R
Sbjct: 475 TSSDEILQELVNIKR 489



 Score = 41.8 bits (96), Expect = 0.032,   Method: Composition-based stats.
 Identities = 20/74 (27%), Positives = 30/74 (40%), Gaps = 6/74 (8%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR------KTISFEEVMHG 57
          ++ S   + S L     RM +I +NIAN  T G       +        K+ S  +   G
Sbjct: 1  MMRSMFSSISALRAHQTRMDVIGDNIANVNTVGFKSSRVTFASVFASVVKSASAPDTASG 60

Query: 58 SGGVRVKKIGVDQS 71
           GG    +IG+  S
Sbjct: 61 RGGSNPMQIGLGVS 74


>gi|237799211|ref|ZP_04587672.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv.
           oryzae str. 1_6]
 gi|330961201|gb|EGH61461.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv.
           maculicola str. ES4326]
 gi|331022066|gb|EGI02123.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv.
           oryzae str. 1_6]
          Length = 262

 Score = 62.2 bits (149), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 19/128 (14%), Positives = 39/128 (30%), Gaps = 2/128 (1%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            L  +  +  +       +   +S  +A A  T    G+   +         +   GG  
Sbjct: 135 ALEPAIVVPQAAQTFTVGQDGTVSVTLAGATATPQIIGN--IQTADFINPAGLQAIGGNL 192

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
             + G   +  +               ++  NV+ + E  +M  T R Y  N + I  + 
Sbjct: 193 YLETGSSGAPQIGTPGLNGLGPTLQNTLENSNVSTVEELVNMITTQRAYEMNSKVISTAD 252

Query: 123 DMMTTTLD 130
            M+     
Sbjct: 253 QMLQNLTQ 260



 Score = 39.9 bits (91), Expect = 0.13,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 23/42 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ + ++A +GLA Q   +  IS N+AN  TTG       ++
Sbjct: 1  MLPALYVAKTGLAAQDTNLTTISNNLANVSTTGFKSDRAEFQ 42


>gi|46579854|ref|YP_010662.1| flagellar hook protein FlgE [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120602680|ref|YP_967080.1| hypothetical protein Dvul_1636 [Desulfovibrio vulgaris DP4]
 gi|46449270|gb|AAS95921.1| flagellar hook protein FlgE [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120562909|gb|ABM28653.1| protein of unknown function DUF1078 domain protein [Desulfovibrio
           vulgaris DP4]
 gi|311234145|gb|ADP86999.1| flagellar hook-basal body protein [Desulfovibrio vulgaris RCH1]
          Length = 564

 Score = 62.2 bits (149), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 14/85 (16%), Positives = 33/85 (38%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            + ++ +   GG                 +     A +S  ++  NV++  E  +M  T 
Sbjct: 480 FTSKQNLRREGGNLFSGTRDSGDPLPGPANSNGLGAISSNSLEQSNVDLAREFVEMITTQ 539

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R + +N + I  +  M+   +++ R
Sbjct: 540 RGFQSNSKVITTTDTMLEVVVNMKR 564



 Score = 40.2 bits (92), Expect = 0.085,   Method: Composition-based stats.
 Identities = 23/75 (30%), Positives = 27/75 (36%), Gaps = 4/75 (5%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDT----PGSDPYRRKTISFEEVMHG 57
            L AS     SGL     RM ++  NIAN  T G         D   + T S   V   
Sbjct: 1  MSLTASMWTGVSGLLAHGERMNVLGNNIANVNTVGFKGSRMDFEDFLNQDTYSAAGVTQV 60

Query: 58 SGGVRVKKIGVDQST 72
            GV +  I  D S 
Sbjct: 61 GRGVSIGAIFGDYSQ 75


>gi|319403978|emb|CBI77566.1| Flagellar hook protein FlgE [Bartonella rochalimae ATCC BAA-1498]
          Length = 402

 Score = 62.2 bits (149), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 20/100 (20%), Positives = 38/100 (38%)

Query: 34  TTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
           +   T         T++  + +   GG   +         +     G     +SG ++  
Sbjct: 303 SNQKTRTIGYIGVTTVASPDSLTFLGGTVFETNSQTGPQMMGRPGDGVFGTLSSGYLEDS 362

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           NV++  E  DM E  R Y AN +  +   ++M   ++L R
Sbjct: 363 NVDMGDELTDMIEAQRNYTANSKVFQTGSELMDVIVNLKR 402



 Score = 42.6 bits (98), Expect = 0.020,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 26/61 (42%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            +        SG+  Q  R+  +++N+ANA T G    +  +        +  + SGGV
Sbjct: 1  MGIYGMMRTGVSGMNAQGTRLSGVADNVANAGTIGYKRTNVQFSNYVTPSGQYAYVSGGV 60

Query: 62 R 62
          +
Sbjct: 61 K 61


>gi|303326311|ref|ZP_07356754.1| flagellar hook protein FlgE [Desulfovibrio sp. 3_1_syn3]
 gi|302864227|gb|EFL87158.1| flagellar hook protein FlgE [Desulfovibrio sp. 3_1_syn3]
          Length = 503

 Score = 62.2 bits (149), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 13/86 (15%), Positives = 31/86 (36%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
             + E+ +   G              +      +     +  V+  NV++  E  +M  T
Sbjct: 418 RFTSEDGLRREGSNLFSATEEAGQMEMGVAGTENYGTVNAYNVENSNVDMATEMVNMIIT 477

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R + +N + +  +  M+   ++L R
Sbjct: 478 QRGFQSNSKVVTTADQMLQKAMELKR 503


>gi|330899406|gb|EGH30825.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv.
           japonica str. M301072PT]
          Length = 262

 Score = 62.2 bits (149), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 19/128 (14%), Positives = 39/128 (30%), Gaps = 2/128 (1%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            L  +  +  +       +   +S  +A A  T    G+   +         +   GG  
Sbjct: 135 ALEPAIVVPQNAQTFTVGQDGTVSVTLAGATATPQIIGN--IQTADFINPAGLQAMGGNL 192

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
             + G   +  +               ++  NV+ + E  +M  T R Y  N + I  + 
Sbjct: 193 YLETGSSGAPQIGTPGLNGLGPTLQNTLENSNVSTVEELVNMITTQRAYEMNSKVISTAD 252

Query: 123 DMMTTTLD 130
            M+     
Sbjct: 253 QMLQNLTQ 260



 Score = 39.5 bits (90), Expect = 0.14,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 23/42 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ + ++A +GLA Q   +  IS N+AN  TTG       ++
Sbjct: 1  MLPALYVAKTGLAAQDTNLTTISNNLANVSTTGFKSDRAEFQ 42


>gi|297183134|gb|ADI19277.1| flagellar basal body rod protein [uncultured delta proteobacterium
           HF0200_39L23]
          Length = 262

 Score = 62.2 bits (149), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 15/86 (17%), Positives = 33/86 (38%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                  +   G           +  V+        +   G ++  NV+++ E  +M  +
Sbjct: 177 RFQNPAGLTPIGKNLYVSTPASGNAIVDAPGANSMGSLTQGFLERSNVSLVEEMVNMITS 236

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y  N + I+ + +M+  T +L+R
Sbjct: 237 QRAYEVNSKAIQSADEMLKNTNNLVR 262



 Score = 41.8 bits (96), Expect = 0.030,   Method: Composition-based stats.
 Identities = 9/35 (25%), Positives = 19/35 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDT 38
          ++ + + A +G+A Q   +   + N+AN  T+G  
Sbjct: 1  MMRALYTAATGMAAQQRNIDTTANNLANVNTSGYK 35


>gi|315654586|ref|ZP_07907492.1| flagellar hook protein FlgE [Mobiluncus curtisii ATCC 51333]
 gi|315491050|gb|EFU80669.1| flagellar hook protein FlgE [Mobiluncus curtisii ATCC 51333]
          Length = 487

 Score = 62.2 bits (149), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 15/79 (18%), Positives = 34/79 (43%)

Query: 55  MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
           +  +G     + G      + E   G   A   G ++  NV++  E  ++  + R + AN
Sbjct: 409 LEKAGSSYFVETGNSGQPQIGEAGTGQRGAMTGGAIEMSNVDLAAEFTNLILSQRGFQAN 468

Query: 115 LQTIKQSHDMMTTTLDLLR 133
            + I  S +++   +++ R
Sbjct: 469 SRVITTSDEILQELVNMKR 487



 Score = 37.9 bits (86), Expect = 0.52,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 29/69 (42%), Gaps = 5/69 (7%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY-----RRKTISFEEVMHGS 58
          ++ S     SGL+V    + + S NIAN  TTG    S  +     +         ++  
Sbjct: 1  MLRSLFTGISGLSVHQTMLDVTSNNIANVNTTGFKSASTRFEDTFSQLVRSGAAPRLNER 60

Query: 59 GGVRVKKIG 67
          GG+   ++G
Sbjct: 61 GGMNPAQVG 69


>gi|330808197|ref|YP_004352659.1| flagellar basal-body rod protein [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327376305|gb|AEA67655.1| flagellar basal-body rod protein [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 261

 Score = 62.2 bits (149), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 18/124 (14%), Positives = 35/124 (28%), Gaps = 3/124 (2%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            L  +  I N        R   +S  +A       +      +         +   G   
Sbjct: 135 ALEPAIIIPNDAQTFTVGRDGTVSITVA---GNPASQVIGNLQTADFINPAGLQAVGNNL 191

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
             +     +  V               ++  NV+ + E  +M  T R Y  N + I  + 
Sbjct: 192 FLETAASGAPQVGTPGLNGFGTTLQNTLETSNVSTVEEMVNMITTQRAYEMNSKVISTAD 251

Query: 123 DMMT 126
            M++
Sbjct: 252 QMLS 255



 Score = 41.4 bits (95), Expect = 0.037,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 22/42 (52%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ +  +A +GL+ Q   +  IS N+AN  TTG       ++
Sbjct: 1  MLPALWVAKTGLSAQDTNLTTISNNLANVSTTGFKRDRAEFQ 42


>gi|188587423|ref|YP_001918968.1| flagellar basal-body rod protein FlgG [Natranaerobius thermophilus
           JW/NM-WN-LF]
 gi|179352110|gb|ACB86380.1| flagellar basal-body rod protein FlgG [Natranaerobius thermophilus
           JW/NM-WN-LF]
          Length = 265

 Score = 62.2 bits (149), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 17/99 (17%), Positives = 31/99 (31%)

Query: 34  TTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
             G+T         +      +   G              V             G ++  
Sbjct: 166 EDGETDEIGEIEIASFINPAGLEAQGSNLYSATAASGDASVGLPGENGRGQLQQGFLEGS 225

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           NVN+  E  +M    R Y  N ++I+ + +MM+   +L 
Sbjct: 226 NVNIAEEMVNMITAQRAYETNSKSIQSTDEMMSIANNLK 264



 Score = 46.8 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 20/42 (47%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          +  S     SG+  Q   M ++S N+ANA TTG       ++
Sbjct: 1  MFRSLWTGASGMNAQQKNMDVVSNNLANANTTGYKNSRAEFQ 42


>gi|311694363|gb|ADP97236.1| flagellar basal-body rod protein FlgG [marine bacterium HP15]
          Length = 262

 Score = 62.2 bits (149), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 17/124 (13%), Positives = 35/124 (28%), Gaps = 3/124 (2%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            L  + ++  +   +   +   ++   A                      + +   G   
Sbjct: 135 PLEPAINVPENATNITIGKDGTVT---AVTDDQAAPVNLGQITLVDFINPQGLQAIGNNL 191

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
            K           E       +   G V+  NV V+ E  +M  T R Y  N + +  + 
Sbjct: 192 FKATNASGDPAEGEPGLAGLGSIEQGSVESSNVEVVEELVNMITTQRAYEMNSKVVSTTD 251

Query: 123 DMMT 126
            M+ 
Sbjct: 252 QMLQ 255



 Score = 43.3 bits (100), Expect = 0.013,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 21/42 (50%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          +  +  ++ +GL+ Q   M  IS N+AN  TTG       ++
Sbjct: 1  MHPALWVSKTGLSAQDTNMSTISNNLANVNTTGFKRDRAVFQ 42


>gi|28869144|ref|NP_791763.1| flagellar basal-body rod protein FlgG [Pseudomonas syringae pv.
           tomato str. DC3000]
 gi|71735047|ref|YP_275559.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|213967579|ref|ZP_03395727.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv.
           tomato T1]
 gi|257484944|ref|ZP_05638985.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv.
           tabaci ATCC 11528]
 gi|289627766|ref|ZP_06460720.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv.
           aesculi str. NCPPB3681]
 gi|289651643|ref|ZP_06482986.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv.
           aesculi str. 2250]
 gi|298487853|ref|ZP_07005893.1| Flagellar basal-body rod protein flgG [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|301385716|ref|ZP_07234134.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv.
           tomato Max13]
 gi|302060071|ref|ZP_07251612.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv.
           tomato K40]
 gi|302134830|ref|ZP_07260820.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv.
           tomato NCPPB 1108]
 gi|302185580|ref|ZP_07262253.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv.
           syringae 642]
 gi|28852384|gb|AAO55458.1| flagellar basal-body rod protein FlgG [Pseudomonas syringae pv.
           tomato str. DC3000]
 gi|71555600|gb|AAZ34811.1| flagellar basal-body rod protein FlgG [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|213927880|gb|EEB61427.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv.
           tomato T1]
 gi|298157578|gb|EFH98658.1| Flagellar basal-body rod protein flgG [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|320325096|gb|EFW81165.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv.
           glycinea str. B076]
 gi|320329355|gb|EFW85348.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv.
           glycinea str. race 4]
 gi|330866425|gb|EGH01134.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv.
           aesculi str. 0893_23]
 gi|330880529|gb|EGH14678.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv.
           glycinea str. race 4]
 gi|330986471|gb|EGH84574.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv.
           lachrymans str. M301315]
 gi|331011045|gb|EGH91101.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv.
           tabaci ATCC 11528]
 gi|331017022|gb|EGH97078.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv.
           lachrymans str. M302278PT]
          Length = 262

 Score = 62.2 bits (149), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 19/128 (14%), Positives = 39/128 (30%), Gaps = 2/128 (1%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            L  +  +  +       +   +S  +A A  T    G+   +         +   GG  
Sbjct: 135 ALEPAIVVPQNAQTFTVGQDGTVSVTLAGATATPQIIGN--IQTADFINPAGLQAIGGNL 192

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
             + G   +  +               ++  NV+ + E  +M  T R Y  N + I  + 
Sbjct: 193 YLETGSSGAPQIGTPGLNGLGPTLQNTLENSNVSTVEELVNMITTQRAYEMNSKVISTAD 252

Query: 123 DMMTTTLD 130
            M+     
Sbjct: 253 QMLQNLTQ 260



 Score = 39.9 bits (91), Expect = 0.14,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 23/42 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ + ++A +GLA Q   +  IS N+AN  TTG       ++
Sbjct: 1  MLPALYVAKTGLAAQDTNLTTISNNLANVSTTGFKSDRAEFQ 42


>gi|237755390|ref|ZP_04584017.1| flagellar basal body and hook protein FlgE [Sulfurihydrogenibium
           yellowstonense SS-5]
 gi|237692431|gb|EEP61412.1| flagellar basal body and hook protein FlgE [Sulfurihydrogenibium
           yellowstonense SS-5]
          Length = 413

 Score = 62.2 bits (149), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 23/48 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            SG ++  NV++  E  ++    R Y AN + I     ++   +++ R
Sbjct: 366 RSGFLELSNVDISREFINLITAQRAYQANARVITTDDQILQEAMNIKR 413



 Score = 39.5 bits (90), Expect = 0.17,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          ++ S + A +GL      + +IS+NIAN  T G       +
Sbjct: 1  MLQSFYTAITGLNGNQQWLNVISDNIANVNTIGFKSERVTF 41


>gi|66046704|ref|YP_236545.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv.
           syringae B728a]
 gi|63257411|gb|AAY38507.1| Flagellar basal body rod protein:Protein of unknown function
           DUF1078 [Pseudomonas syringae pv. syringae B728a]
          Length = 262

 Score = 62.2 bits (149), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 19/128 (14%), Positives = 39/128 (30%), Gaps = 2/128 (1%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            L  +  +  +       +   +S  +A A  T    G+   +         +   GG  
Sbjct: 135 ALEPAIVVPQNAQTFTVGQDGTVSVTLAGATATPQIIGN--IQTADFINPAGLQAIGGNL 192

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
             + G   +  +               ++  NV+ + E  +M  T R Y  N + I  + 
Sbjct: 193 YLETGSSGAPQIGTPGLNGLGPTLQNTLENSNVSTVEELVNMITTQRAYEMNSKVISTAD 252

Query: 123 DMMTTTLD 130
            M+     
Sbjct: 253 QMLQNLTQ 260



 Score = 39.9 bits (91), Expect = 0.14,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 23/42 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ + ++A +GLA Q   +  IS N+AN  TTG       ++
Sbjct: 1  MLPALYVAKTGLAAQDTNLTTISNNLANVSTTGFKSDRAEFQ 42


>gi|238796906|ref|ZP_04640410.1| Flagellar basal-body rod protein flgG [Yersinia mollaretii ATCC
           43969]
 gi|238719166|gb|EEQ10978.1| Flagellar basal-body rod protein flgG [Yersinia mollaretii ATCC
           43969]
          Length = 260

 Score = 62.2 bits (149), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 16/84 (19%), Positives = 28/84 (33%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
           T   +  +   G    ++     +                G ++  NVNV  E  +M +T
Sbjct: 177 TFINDSGLESIGENLYRETQSSGAPNETTPGLNGGGTLKQGYIETSNVNVAEELVNMIQT 236

Query: 108 NRLYMANLQTIKQSHDMMTTTLDL 131
            R Y  N + +  S  M+     L
Sbjct: 237 QRAYEINSKAVSTSDQMLQRLTQL 260



 Score = 43.7 bits (101), Expect = 0.007,   Method: Composition-based stats.
 Identities = 15/41 (36%), Positives = 20/41 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I S  IA +GL  Q   M +IS N+AN  T G       +
Sbjct: 1  MIRSLWIAKTGLEAQQTNMDVISNNLANVSTNGFKRQRAVF 41


>gi|257095357|ref|YP_003168998.1| flagellar basal-body rod protein FlgG [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257047881|gb|ACV37069.1| flagellar basal-body rod protein FlgG [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 260

 Score = 62.2 bits (149), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/129 (18%), Positives = 37/129 (28%), Gaps = 3/129 (2%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            L  +  I    L V  A   ++S  +    TT         +  T      +   G   
Sbjct: 135 PLQPAITIPAQALTVTVATDGVVSITL---PTTTAPVQIGTIQVATFVNNGGLQSVGENL 191

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
             +     +                  V+  NVNV  E   M +T R Y  N + +  S 
Sbjct: 192 YLETASSGTATPNTPGTNGSGVVVQNYVEASNVNVAQELVLMIQTQRAYELNAKVVSTSD 251

Query: 123 DMMTTTLDL 131
            M+     L
Sbjct: 252 QMLARLTQL 260



 Score = 40.6 bits (93), Expect = 0.081,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 21/42 (50%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          +I S   A++GL  Q  ++ II+ N+AN  T G       + 
Sbjct: 1  MIRSLWTASTGLTAQQVQIDIIANNLANVSTNGFKQARGIFA 42


>gi|56964026|ref|YP_175757.1| flagellar basal body rod protein FlgG [Bacillus clausii KSM-K16]
 gi|56910269|dbj|BAD64796.1| flagellar hook protein FlgE [Bacillus clausii KSM-K16]
          Length = 267

 Score = 62.2 bits (149), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 34/85 (40%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +  E ++ +GG             +            SG ++  NV++  E ++M    
Sbjct: 183 FANPEGLNSAGGSLFTATPASGPANLVIPGTQGTGDIQSGYLEMSNVDLADEFSEMIVAQ 242

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R + AN + I  S +++   ++L R
Sbjct: 243 RGFQANSRIITTSDEILQELVNLKR 267



 Score = 35.6 bits (80), Expect = 2.3,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 29/68 (42%), Gaps = 4/68 (5%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR----RKTISFEEVMHGSG 59
          +I S +   SG+     ++ ++  NIAN  T G   G   ++    ++           G
Sbjct: 1  MIRSMYSGISGMKGFQTKLDVVGNNIANVNTHGFKKGRVMFQDMVSQQVQGPMAATPNRG 60

Query: 60 GVRVKKIG 67
          GV  K+IG
Sbjct: 61 GVNSKQIG 68


>gi|298345998|ref|YP_003718685.1| flagellar basal body and hook protein [Mobiluncus curtisii ATCC
           43063]
 gi|304390244|ref|ZP_07372198.1| flagellar hook protein FlgE [Mobiluncus curtisii subsp. curtisii
           ATCC 35241]
 gi|298236059|gb|ADI67191.1| flagellar basal body and hook protein [Mobiluncus curtisii ATCC
           43063]
 gi|304326726|gb|EFL93970.1| flagellar hook protein FlgE [Mobiluncus curtisii subsp. curtisii
           ATCC 35241]
          Length = 484

 Score = 62.2 bits (149), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 15/79 (18%), Positives = 34/79 (43%)

Query: 55  MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
           +  +G     + G      + E   G   A   G ++  NV++  E  ++  + R + AN
Sbjct: 406 LEKAGSSYFVETGNSGQPQIGEAGTGQRGAMTGGAIEMSNVDLAAEFTNLILSQRGFQAN 465

Query: 115 LQTIKQSHDMMTTTLDLLR 133
            + I  S +++   +++ R
Sbjct: 466 SRVITTSDEILQELVNMKR 484



 Score = 37.5 bits (85), Expect = 0.54,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 29/69 (42%), Gaps = 5/69 (7%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY-----RRKTISFEEVMHGS 58
          ++ S     SGL+V    + + S NIAN  TTG    S  +     +         ++  
Sbjct: 1  MLRSLFTGISGLSVHQTMLDVTSNNIANVNTTGFKSASTRFEDTFSQLVRSGAAPRLNER 60

Query: 59 GGVRVKKIG 67
          GG+   ++G
Sbjct: 61 GGMNPAQVG 69


>gi|218507129|ref|ZP_03505007.1| flagellar basal body rod protein FlgG [Rhizobium etli Brasil 5]
          Length = 217

 Score = 62.2 bits (149), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 26/78 (33%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
              E  +   G    ++        V   D         G ++  NV+ + E  ++    
Sbjct: 133 FVNEAGLQPIGDNLFQETAASGEAVVGNPDEEGFAYMKQGYLESSNVDPVKEITELISAQ 192

Query: 109 RLYMANLQTIKQSHDMMT 126
           R Y  N + I  + +M +
Sbjct: 193 RAYEMNSKVITTADEMAS 210


>gi|313672412|ref|YP_004050523.1| flagellar basal-body rod protein flgg [Calditerrivibrio
           nitroreducens DSM 19672]
 gi|312939168|gb|ADR18360.1| flagellar basal-body rod protein FlgG [Calditerrivibrio
           nitroreducens DSM 19672]
          Length = 262

 Score = 62.2 bits (149), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 18/86 (20%), Positives = 28/86 (32%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                  +   G    +                     A GI++  NVNV  E  +M   
Sbjct: 177 RFINPSGLKNIGRNLYQPTAASGEPVTGAPGTDAFGTVAQGILEMSNVNVAEEMVNMITG 236

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y  N + I+ S +M+    +L R
Sbjct: 237 QRAYELNSKAIQTSDEMLQVVNNLKR 262



 Score = 44.5 bits (103), Expect = 0.005,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 22/63 (34%), Gaps = 3/63 (4%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +  +   A SG+  Q   +  I+ N+AN    G       +        + M  +GG   
Sbjct: 1  MFRAMWTAASGMTAQQMNIDNIANNLANVNNIGFKKSRIHF---EDLLYQEMRPAGGPTA 57

Query: 64 KKI 66
            I
Sbjct: 58 AGI 60


>gi|116328474|ref|YP_798194.1| endoflagellar distal basal body rod protein [Leptospira
           borgpetersenii serovar Hardjo-bovis L550]
 gi|116331206|ref|YP_800924.1| endoflagellar distal basal body rod protein [Leptospira
           borgpetersenii serovar Hardjo-bovis JB197]
 gi|116121218|gb|ABJ79261.1| Endoflagellar distal basal body rod protein [Leptospira
           borgpetersenii serovar Hardjo-bovis L550]
 gi|116124895|gb|ABJ76166.1| Endoflagellar distal basal body rod protein [Leptospira
           borgpetersenii serovar Hardjo-bovis JB197]
          Length = 287

 Score = 61.8 bits (148), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 18/103 (17%), Positives = 36/103 (34%), Gaps = 3/103 (2%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDP---GHPVANAS 87
           N  +        P     +    V +     +        +    E  P       +   
Sbjct: 181 NGTSLDKNRFETPVLLDRLKIRTVENPRHLDKEGDSFYADTPESGEPTPFELKDEPSILQ 240

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           G ++  NV+V+ E  +M E NR Y AN +T++    ++   ++
Sbjct: 241 GYLEASNVSVVTEMVEMIEVNRSYEANQKTVQTQDSLLGKLIN 283



 Score = 50.6 bits (119), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 19/106 (17%), Positives = 36/106 (33%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           ++   +   +G+ +Q  RM +IS N+AN   T     +  ++             G  +V
Sbjct: 1   MLRGMYTGANGMIIQQTRMDVISNNLANVDKTAFKRDTTVFKTFPELLLHRFDEDGVGKV 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNR 109
                D +  V +   G  V       +   V       D+   +R
Sbjct: 61  PMGSFDTAPVVGKLGLGGEVNEVYTRFEQGAVKKTENPFDIMLQDR 106


>gi|297182936|gb|ADI19085.1| flagellar basal body rod protein [uncultured delta proteobacterium
           HF0070_15B21]
          Length = 262

 Score = 61.8 bits (148), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 15/86 (17%), Positives = 32/86 (37%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                  +   G           +  V+            G ++  NV+++ E  +M  +
Sbjct: 177 RFQNPAGLTPLGKNLYVSTPASGNAIVDAPGASSMGTLTQGFLERSNVSLVEEMVNMITS 236

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y  N + I+ + +M+  T +L+R
Sbjct: 237 QRAYEVNSKAIQSADEMLKNTNNLVR 262



 Score = 42.2 bits (97), Expect = 0.024,   Method: Composition-based stats.
 Identities = 10/35 (28%), Positives = 19/35 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDT 38
          ++ + + A +G+A Q   +   + N+AN  TTG  
Sbjct: 1  MMRALYTAATGMAAQQRNIDTTANNLANVNTTGYK 35


>gi|319406994|emb|CBI80631.1| Flagellar hook protein FlgE [Bartonella sp. 1-1C]
          Length = 402

 Score = 61.8 bits (148), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 20/100 (20%), Positives = 38/100 (38%)

Query: 34  TTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
           +   T         T++  + +   GG   +         +     G     +SG ++  
Sbjct: 303 SNQKTRTIGYIGVTTVASTDSLTFLGGTVFETNSQTGPQMMGRPGDGVFGTLSSGYLEDS 362

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           NV++  E  DM E  R Y AN +  +   ++M   ++L R
Sbjct: 363 NVDMGDELTDMIEAQRNYTANSKVFQTGSELMDVIVNLKR 402



 Score = 41.8 bits (96), Expect = 0.028,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 28/70 (40%), Gaps = 1/70 (1%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            +        SG+  Q  R+  +++N+ANA T G       +        +  +  GGV
Sbjct: 1  MGIYGMMRTGVSGMNAQGTRLSGVADNVANAGTIGYKRTDVQFSNYVTPSGKYAYVPGGV 60

Query: 62 RVKKIGVDQS 71
          +   IG D S
Sbjct: 61 K-SHIGHDVS 69


>gi|319790416|ref|YP_004152049.1| flagellar hook-basal body protein [Thermovibrio ammonificans HB-1]
 gi|317114918|gb|ADU97408.1| flagellar hook-basal body protein [Thermovibrio ammonificans HB-1]
          Length = 522

 Score = 61.8 bits (148), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 25/48 (52%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            SG+++  NV++  E  ++    R Y AN + I     ++  T+++ R
Sbjct: 475 RSGMLEMSNVDIANEFINLITAQRSYQANARVITTDDQILQETMNIKR 522



 Score = 37.5 bits (85), Expect = 0.60,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 20/41 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          ++ S + A +GL      + IIS+NIAN  T G       +
Sbjct: 1  MLQSFYTAFTGLTADKRWLSIISDNIANVNTVGFKAERAVF 41


>gi|146296289|ref|YP_001180060.1| hypothetical protein Csac_1266 [Caldicellulosiruptor
           saccharolyticus DSM 8903]
 gi|145409865|gb|ABP66869.1| protein of unknown function DUF1078 domain protein
           [Caldicellulosiruptor saccharolyticus DSM 8903]
          Length = 484

 Score = 61.8 bits (148), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 23/135 (17%), Positives = 46/135 (34%), Gaps = 5/135 (3%)

Query: 3   YLIASAHIAN----SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
            + +S  +A     S  ++Q   +    + I    + G           T +    +   
Sbjct: 351 NMDSSIRVAQMTGYSAGSLQGFNIDATGK-ITGIYSNGLNQLIGQIAIATFANPAGLQRI 409

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
           G              +     G     + G ++  NV++  E  DM  T R Y AN + I
Sbjct: 410 GDNLYINTVNSGDPEIGTPGSGSRGTISQGTLEMSNVDLAKEFTDMIVTQRGYQANARVI 469

Query: 119 KQSHDMMTTTLDLLR 133
             S +++   +++ R
Sbjct: 470 TASDELLQDLVNIKR 484



 Score = 38.3 bits (87), Expect = 0.31,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 29/74 (39%), Gaps = 6/74 (8%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR------RKTISFEEVMHG 57
          ++ S   + + L     RM +I +NIAN  T G       +        K  S  +   G
Sbjct: 1  MMRSMFSSITSLRAHQTRMDVIGDNIANVNTVGFKSSRVTFASVFASVIKAASAPDTTSG 60

Query: 58 SGGVRVKKIGVDQS 71
           GG    +IG+  S
Sbjct: 61 RGGSNPMQIGLGVS 74


>gi|312880335|ref|ZP_07740135.1| flagellar basal-body rod protein FlgG [Aminomonas paucivorans DSM
           12260]
 gi|310783626|gb|EFQ24024.1| flagellar basal-body rod protein FlgG [Aminomonas paucivorans DSM
           12260]
          Length = 262

 Score = 61.8 bits (148), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 17/86 (19%), Positives = 31/86 (36%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                  +  SG     +     +  V         A    +++  NV V+ E  +M   
Sbjct: 177 RFVNPGGLRASGKNLFLETPASGAPIVGNPGDDGLGATLQRVLEMANVQVVEEMVNMIVA 236

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y AN +TI  + +++    +L R
Sbjct: 237 QRAYEANSKTISTADELLRIANNLRR 262



 Score = 42.2 bits (97), Expect = 0.024,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 20/42 (47%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          +I S     +G+  Q   + ++S N+AN  T+G       ++
Sbjct: 1  MIRSLWSGATGMIAQQTNLDVVSNNLANVNTSGYKKVRADFQ 42


>gi|294853175|ref|ZP_06793847.1| flagellar basal-body rod protein FlgG [Brucella sp. NVSL 07-0026]
 gi|294818830|gb|EFG35830.1| flagellar basal-body rod protein FlgG [Brucella sp. NVSL 07-0026]
          Length = 210

 Score = 61.8 bits (148), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 18/126 (14%), Positives = 39/126 (30%), Gaps = 3/126 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
           + +  +  I    + V       +    A  +   +            + E  +   GG 
Sbjct: 82  NPVEPAITIPPDAIEVTITDTGQV---FAKLQDQINQVDLGQLTLANFTNEAGLEPLGGN 138

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
             ++        V         +   G ++  NV+ + E  D+    R Y  N + I+ +
Sbjct: 139 LYRETEASGGPLVGVPGDPGYGSIKQGYLEASNVDPVKEITDLITAQRAYEMNSKVIQAA 198

Query: 122 HDMMTT 127
            +M  T
Sbjct: 199 DEMAAT 204


>gi|168699693|ref|ZP_02731970.1| flagellar basal body rod protein FlgG [Gemmata obscuriglobus UQM
           2246]
          Length = 263

 Score = 61.8 bits (148), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 22/130 (16%), Positives = 43/130 (33%), Gaps = 2/130 (1%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +     I    ++V       IS   A A       G     R        +   G    
Sbjct: 136 ISPQVTIPTQAVSVSVGSDGTISVQNAGALNASTVLGQLTLVR--FQNPAGLSAEGRNLF 193

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
            +     +  +             G ++  NV+V+ E  ++    R Y  N + ++ + +
Sbjct: 194 AETASSGTPLIATPGQNGVGFTRQGFLERSNVDVVTELINLILAQRAYEFNTRAVRTADN 253

Query: 124 MMTTTLDLLR 133
           M+ +T DL+R
Sbjct: 254 MLASTTDLIR 263



 Score = 41.0 bits (94), Expect = 0.060,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 21/42 (50%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          +I +   + +G+ VQ+  +   S NIAN  T G   G   ++
Sbjct: 1  MIKALFTSATGMNVQTTAIDNTSNNIANVNTNGFKKGQADFQ 42


>gi|295097201|emb|CBK86291.1| flagellar basal-body rod protein FlgG, Gram-negative bacteria
           [Enterobacter cloacae subsp. cloacae NCTC 9394]
          Length = 260

 Score = 61.8 bits (148), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 15/84 (17%), Positives = 27/84 (32%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
           T   +  +   GG   ++     +                  ++  NVNV  E  +M + 
Sbjct: 177 TFVNDAGLESIGGNLYRETQSSGAPNELNPGLEDAGTLKQKYIETSNVNVAEELVNMIQV 236

Query: 108 NRLYMANLQTIKQSHDMMTTTLDL 131
            R Y  N + +  S  M+     L
Sbjct: 237 QRAYEINSKAVSASDQMLQRLTQL 260



 Score = 46.0 bits (107), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 22/61 (36%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I S  IA +GL  Q   M +IS N+AN  T G       ++                + 
Sbjct: 1  MIRSLWIAKTGLEAQQTNMDVISNNLANVNTNGFKRQRAVFQDLLYQTMRQPGAQASEQT 60

Query: 64 K 64
           
Sbjct: 61 T 61


>gi|222147589|ref|YP_002548546.1| flagellar hook protein FlgE [Agrobacterium vitis S4]
 gi|221734577|gb|ACM35540.1| flagellar hook protein [Agrobacterium vitis S4]
          Length = 418

 Score = 61.8 bits (148), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 26/125 (20%), Positives = 49/125 (39%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
            +  +G +  S+     S NI      G T         T++  + M    G   +    
Sbjct: 294 DVDGNGASAASSVTVNSSGNIVATYQDGSTANLYKVALATVASPDNMKSVNGTAYQVTAD 353

Query: 69  DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
             +  V   + G   +  S  ++  NV++  E  +M ++ R Y AN +  + + DM+ T 
Sbjct: 354 AGTVVVGFANTGSFGSINSKTLETSNVDLATELTNMIQSQRSYSANSKVFQTAADMLDTL 413

Query: 129 LDLLR 133
           + L R
Sbjct: 414 ISLKR 418



 Score = 40.2 bits (92), Expect = 0.097,   Method: Composition-based stats.
 Identities = 16/71 (22%), Positives = 28/71 (39%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            L  S + A SGL  Q++++  + +N+AN+ TTG    S  +    +        + G 
Sbjct: 1  MSLSGSMNTAVSGLQAQASKLSTVGDNVANSDTTGYKRVSTAFSSLVVGSSGSGTYNSGG 60

Query: 62 RVKKIGVDQST 72
                   S 
Sbjct: 61 VQTTTVNSISE 71


>gi|289679021|ref|ZP_06499911.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv.
           syringae FF5]
 gi|330972416|gb|EGH72482.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv.
           aceris str. M302273PT]
          Length = 262

 Score = 61.8 bits (148), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 19/128 (14%), Positives = 39/128 (30%), Gaps = 2/128 (1%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            L  +  +  +       +   +S  +A A  T    G+   +         +   GG  
Sbjct: 135 ALEPAIVVPQNAQTFTVGQDGTVSVTLAGATATPQIIGN--IQTADFINPAGLQAMGGNL 192

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
             + G   +  +               ++  NV+ + E  +M  T R Y  N + I  + 
Sbjct: 193 YLETGSSGAPQIGTPGLNGLGPTLQNTLENSNVSTVEELVNMITTQRAYEMNSKVISTAD 252

Query: 123 DMMTTTLD 130
            M+     
Sbjct: 253 QMLQNLTQ 260



 Score = 39.5 bits (90), Expect = 0.16,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 23/42 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ + ++A +GLA Q   +  IS N+AN  TTG       ++
Sbjct: 1  MLPALYVAKTGLAAQDTNLTTISNNLANVSTTGFKSDRAEFQ 42


>gi|207093458|ref|ZP_03241245.1| flagellar basal body rod protein FlgC [Helicobacter pylori
           HPKX_438_AG0C1]
          Length = 72

 Score = 61.8 bits (148), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 29/71 (40%), Positives = 42/71 (59%)

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
           + KI  D S  + ++DP HP ANA G V YPNVN +VE AD+ E  R Y AN+   + + 
Sbjct: 1   MDKIVRDDSEPLMKYDPSHPDANAQGYVAYPNVNAVVEMADLVEATRAYQANVAAFQSAK 60

Query: 123 DMMTTTLDLLR 133
           +M    + +L+
Sbjct: 61  NMAQNAIGMLQ 71


>gi|56419762|ref|YP_147080.1| flagellar basal body rod protein FlgG [Geobacillus kaustophilus
           HTA426]
 gi|56379604|dbj|BAD75512.1| flagellar hook protein [Geobacillus kaustophilus HTA426]
          Length = 263

 Score = 61.8 bits (148), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 14/102 (13%), Positives = 36/102 (35%)

Query: 32  ARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVK 91
              +G        +    +  + +  +G    ++     +               SG ++
Sbjct: 162 VDASGTLSTIGTIQLAKFANNDGLEKAGNNLFRETTNSGTPTTGAPGANGTGTIVSGALE 221

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             NV++  E  +M    R + AN + I  S +++   ++L +
Sbjct: 222 MSNVDLAEEFTEMIVAQRGFQANTRIITTSDEILQELVNLKK 263


>gi|260437439|ref|ZP_05791255.1| flagellar basal-body rod protein FlgG [Butyrivibrio crossotus DSM
           2876]
 gi|292810071|gb|EFF69276.1| flagellar basal-body rod protein FlgG [Butyrivibrio crossotus DSM
           2876]
          Length = 284

 Score = 61.8 bits (148), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 20/44 (45%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  NV V  E  ++    R Y  N + I+ + DM+     L R
Sbjct: 241 LEASNVQVADEMVNLIVAQRAYEMNSKAIQAADDMLGQANQLKR 284



 Score = 44.9 bits (104), Expect = 0.004,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 27/63 (42%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ + + A SG+  Q   + +IS N+AN  +TG    +  ++       +    S     
Sbjct: 1  MMRALYTAASGMIAQQTNVDVISNNLANVNSTGYKASTAEFKSLLYQTLQSRSTSANGDD 60

Query: 64 KKI 66
          K I
Sbjct: 61 KPI 63


>gi|224531677|ref|ZP_03672309.1| flagellar basal-body rod protein FlgG [Borrelia valaisiana VS116]
 gi|224511142|gb|EEF81548.1| flagellar basal-body rod protein FlgG [Borrelia valaisiana VS116]
          Length = 265

 Score = 61.8 bits (148), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 34/111 (30%), Gaps = 3/111 (2%)

Query: 23  QIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHP 82
            I+S  I N     +    +            +   G    K+                 
Sbjct: 157 GIVSVKIDNNNEPIELGQIE---ISRFVNPAGLSAIGSNLFKETAGSGQEIAGIPGTEGM 213

Query: 83  VANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
                GI++  NV++  E   M    R Y  N + I+ S +M+    +L R
Sbjct: 214 GRLKQGILEMSNVSIAEEMVTMIVAQRAYEINSKAIQTSDNMLGIANNLKR 264



 Score = 42.2 bits (97), Expect = 0.026,   Method: Composition-based stats.
 Identities = 10/33 (30%), Positives = 18/33 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ +   A SG+  Q   +  I+ N++N  TTG
Sbjct: 1  MMRALWTAASGMTAQQYNVDTIANNLSNVNTTG 33


>gi|288553056|ref|YP_003424991.1| flagellar basal body rod protein FlgG [Bacillus pseudofirmus OF4]
 gi|288544216|gb|ADC48099.1| flagellar basal body rod protein FlgG [Bacillus pseudofirmus OF4]
          Length = 279

 Score = 61.8 bits (148), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 19/106 (17%), Positives = 40/106 (37%), Gaps = 2/106 (1%)

Query: 28  NIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANAS 87
           N+ ++     +PG+        S  E +   G    +      +            A  +
Sbjct: 176 NVIDSAGQLTSPGTISLAY--FSNPEGLQKEGDNLYQVTDNSGAAQRTTPTNDGTGALVA 233

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  NV++  E  +M    R + AN + I  S +++   ++L R
Sbjct: 234 GTLEMSNVDLSEEFTEMIVAQRGFQANTRIITTSDEILQELVNLKR 279



 Score = 35.6 bits (80), Expect = 2.6,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 19/42 (45%)

Query: 3  YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
           ++ S +   SG+     ++ +I  NI+N  T G   G   +
Sbjct: 10 DMLRSMYSGISGMRNFQTKLDVIGNNISNVNTAGFKKGRTTF 51


>gi|229825258|ref|ZP_04451327.1| hypothetical protein GCWU000182_00611 [Abiotrophia defectiva ATCC
           49176]
 gi|229790630|gb|EEP26744.1| hypothetical protein GCWU000182_00611 [Abiotrophia defectiva ATCC
           49176]
          Length = 274

 Score = 61.8 bits (148), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 23/48 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            SG ++  NV+   E  +M  T R Y  N + I  S +M+    +L R
Sbjct: 227 KSGYLEGSNVSAADEMVNMIVTQRAYQLNSKAITASDEMLEQANNLRR 274



 Score = 46.8 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/65 (29%), Positives = 26/65 (40%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ S   A SG+  Q   +  IS NIAN  TTG    S  ++       +          
Sbjct: 1  MLRSLWSAASGMMAQQVNLDTISNNIANINTTGFKTQSMEFKSLLYQQLKTKSTDSEGNP 60

Query: 64 KKIGV 68
          K IGV
Sbjct: 61 KPIGV 65


>gi|306820122|ref|ZP_07453770.1| flagellar hook protein FlgE [Eubacterium yurii subsp. margaretiae
           ATCC 43715]
 gi|304551900|gb|EFM39843.1| flagellar hook protein FlgE [Eubacterium yurii subsp. margaretiae
           ATCC 43715]
          Length = 474

 Score = 61.8 bits (148), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 19/86 (22%), Positives = 33/86 (38%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
           T S    +   G              + +   G   A  SG ++  NV++  E  +M  T
Sbjct: 389 TFSNVNGLQKQGDNLWSPTENSGEANINKPGSGGNGALLSGALEMSNVDLAKEFTNMIVT 448

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R + AN + I  +  M+   ++L R
Sbjct: 449 QRGFQANSRVITTTDQMLEELVNLKR 474



 Score = 42.6 bits (98), Expect = 0.017,   Method: Composition-based stats.
 Identities = 17/59 (28%), Positives = 23/59 (38%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
          ++ S + A S L    ARM +I  NIAN  T         ++           GS G R
Sbjct: 1  MMRSMNSAVSSLKNHQARMDVIGNNIANVNTVAFKAARTTFKDTYSQLTRAASGSSGDR 59


>gi|258514011|ref|YP_003190233.1| hypothetical protein Dtox_0696 [Desulfotomaculum acetoxidans DSM
           771]
 gi|257777716|gb|ACV61610.1| protein of unknown function DUF1078 domain protein
           [Desulfotomaculum acetoxidans DSM 771]
          Length = 263

 Score = 61.8 bits (148), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 15/47 (31%), Positives = 25/47 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           S  ++  NV++  E ++M  T R Y AN + I  S +M+   + L R
Sbjct: 217 SNNLEMSNVDLTNEFSNMIITQRGYQANSKVITTSDEMLQELIGLKR 263



 Score = 42.6 bits (98), Expect = 0.017,   Method: Composition-based stats.
 Identities = 18/66 (27%), Positives = 26/66 (39%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I S +   SG+     RM +I  NIAN  TTG       ++            + GV +
Sbjct: 1  MIRSLYSGVSGMKNHQTRMDVIGNNIANVNTTGYKSSRVQFKDVLGQTIAGGQVASGVTI 60

Query: 64 KKIGVD 69
            I  D
Sbjct: 61 AGINKD 66


>gi|224372657|ref|YP_002607029.1| flagellar basal body rod protein FlgG [Nautilia profundicola AmH]
 gi|223588586|gb|ACM92322.1| flagellar basal-body rod protein FlgG [Nautilia profundicola AmH]
          Length = 262

 Score = 61.8 bits (148), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 18/86 (20%), Positives = 27/86 (31%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                  +H  G              V             G V+  NV ++ E  D+   
Sbjct: 177 KFINPAGLHSLGSNLYIDTTASGDPIVSTPGLDGTGELRQGFVEMSNVQLVEEMTDLITG 236

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y A  + I  S +M+ T  +L R
Sbjct: 237 QRAYDAASKAIVTSDEMLQTVNNLKR 262



 Score = 40.6 bits (93), Expect = 0.075,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 21/42 (50%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S + A +G+  Q  ++ ++S NI+N  T G       + 
Sbjct: 1  MVRSLYTAATGMMAQQMQIDVVSNNISNVNTIGYKKQRAEFA 42


>gi|312876506|ref|ZP_07736489.1| fagellar hook-basal body protein [Caldicellulosiruptor
           lactoaceticus 6A]
 gi|311796717|gb|EFR13063.1| fagellar hook-basal body protein [Caldicellulosiruptor
           lactoaceticus 6A]
          Length = 494

 Score = 61.8 bits (148), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 17/86 (19%), Positives = 31/86 (36%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
           T +    +   G              +     G       G ++  NV++  E  DM  T
Sbjct: 409 TFANPAGLQRIGDNLYINTPNSGDPEIGIPGTGSRGTIFQGTLEMSNVDLAKEFTDMIVT 468

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y AN + I  S +++   +++ R
Sbjct: 469 QRGYQANARVITASDELLQDLVNIKR 494



 Score = 42.9 bits (99), Expect = 0.015,   Method: Composition-based stats.
 Identities = 20/74 (27%), Positives = 30/74 (40%), Gaps = 6/74 (8%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR------RKTISFEEVMHG 57
          ++ S   + S L     RM +I +NIAN  T G       +        K+ S  +   G
Sbjct: 1  MMRSMFSSISALRAHQTRMDVIGDNIANVNTVGFKSSRVTFASVFASVLKSASAPDTASG 60

Query: 58 SGGVRVKKIGVDQS 71
           GG    +IG+  S
Sbjct: 61 RGGSNPMQIGLGVS 74


>gi|241766922|ref|ZP_04764728.1| flagellar basal-body rod protein FlgG [Acidovorax delafieldii 2AN]
 gi|241362626|gb|EER58474.1| flagellar basal-body rod protein FlgG [Acidovorax delafieldii 2AN]
          Length = 259

 Score = 61.8 bits (148), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 19/99 (19%), Positives = 32/99 (32%)

Query: 33  RTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKY 92
            + G   G+      +      +   G    K+     +                G ++ 
Sbjct: 161 DSAGKAVGTGRLTLASFINPAGLEPVGQNLYKESIASGNPQTGSPTSAGFGELKQGFLET 220

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NVNV+ E   M +T R Y  N + I+ S  M+     L
Sbjct: 221 SNVNVVEELVTMIQTQRAYEMNSKAIQTSDQMLAKLAQL 259



 Score = 45.2 bits (105), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 24/41 (58%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I S  IA +G++ Q  ++ +IS N+AN  TTG    +  +
Sbjct: 1  MINSLWIAKTGMSAQQTQLDVISHNLANVSTTGYKRNNAVF 41


>gi|188997539|ref|YP_001931790.1| protein of unknown function DUF1078 domain protein
           [Sulfurihydrogenibium sp. YO3AOP1]
 gi|188932606|gb|ACD67236.1| protein of unknown function DUF1078 domain protein
           [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 413

 Score = 61.8 bits (148), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 23/48 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            SG ++  NV++  E  ++    R Y AN + I     ++   +++ R
Sbjct: 366 RSGFLELSNVDISREFINLITAQRAYQANARVITTDDQILQEAMNIKR 413



 Score = 39.1 bits (89), Expect = 0.20,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          ++ S + A +GL      + +IS+NIAN  T G       +
Sbjct: 1  MLQSFYTAITGLNGNQQWLNVISDNIANVNTIGFKSERVTF 41


>gi|323700159|ref|ZP_08112071.1| fagellar hook-basal body protein [Desulfovibrio sp. ND132]
 gi|323460091|gb|EGB15956.1| fagellar hook-basal body protein [Desulfovibrio desulfuricans
           ND132]
          Length = 558

 Score = 61.8 bits (148), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 14/86 (16%), Positives = 29/86 (33%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
           T + +  +   GG    +          +             ++  NV++  E  +M  T
Sbjct: 473 TFTNQHGLRREGGNLFTETLESGPALTGQAGSTGKGTIDGNALEMSNVDMATEFVNMITT 532

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R + AN + I     M+   + + R
Sbjct: 533 QRGFQANTKVITTVDSMLGEVISMKR 558



 Score = 34.5 bits (77), Expect = 5.4,   Method: Composition-based stats.
 Identities = 17/35 (48%), Positives = 19/35 (54%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTG 36
            L AS     SGL V S RM +I  N+AN  TTG
Sbjct: 1  MGLGASLFSGISGLTVHSERMTVIGNNLANVNTTG 35


>gi|197285508|ref|YP_002151380.1| flagellar basal-body rod protein [Proteus mirabilis HI4320]
 gi|227355999|ref|ZP_03840391.1| flagellar basal-body rod protein (distal rod protein) [Proteus
           mirabilis ATCC 29906]
 gi|194682995|emb|CAR43442.1| flagellar basal-body rod protein (distal rod protein) [Proteus
           mirabilis HI4320]
 gi|227163987|gb|EEI48889.1| flagellar basal-body rod protein (distal rod protein) [Proteus
           mirabilis ATCC 29906]
          Length = 260

 Score = 61.8 bits (148), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 23/128 (17%), Positives = 39/128 (30%), Gaps = 3/128 (2%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           ++ +  +  +   V   R  I+S  I     +            T   +  +   G    
Sbjct: 136 IVPAIILPETAKKVMVGRDGIVSVEI---EGSPAPQQVGQLTLTTFINDSGLESVGENLY 192

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
            +     +                G V+  NVNV  E  +M +T R Y  N + I  S  
Sbjct: 193 LETASSGAPTENAPGINGAGLLYQGYVETSNVNVAEELVNMIQTQRAYEINSKAISTSDQ 252

Query: 124 MMTTTLDL 131
           M+     L
Sbjct: 253 MLQKLTQL 260



 Score = 44.5 bits (103), Expect = 0.005,   Method: Composition-based stats.
 Identities = 15/41 (36%), Positives = 20/41 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I S  IA +GL  Q   M +IS N+AN  T G       +
Sbjct: 1  MIRSLWIAKTGLDAQQTNMDVISNNLANVSTNGFKRQRAVF 41


>gi|260222470|emb|CBA32066.1| Flagellar basal-body rod protein flgG [Curvibacter putative
           symbiont of Hydra magnipapillata]
          Length = 260

 Score = 61.8 bits (148), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 23/132 (17%), Positives = 40/132 (30%), Gaps = 9/132 (6%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR---RKTISFEEVMHGSG 59
            ++   +I  +  +V       I+++ A            P       +      +   G
Sbjct: 135 PILNGINIPANATSV------AIAQDGAVTAMVPGNVAPQPIGTITLASFINPAGLEPKG 188

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
                +                    A G V+  NVNV+ E   M +T R Y  N + I+
Sbjct: 189 QNIYAESTASGQPNAGTAGANGLGTLAQGFVETSNVNVVQELVTMIQTQRAYEMNSKAIQ 248

Query: 120 QSHDMMTTTLDL 131
            S  M+     L
Sbjct: 249 TSDQMLQKLGQL 260



 Score = 41.0 bits (94), Expect = 0.052,   Method: Composition-based stats.
 Identities = 12/33 (36%), Positives = 20/33 (60%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          +I S  I+ +G+  Q  ++ +IS N+AN  T G
Sbjct: 1  MINSLWISKTGMEAQQMQLDVISNNLANVSTNG 33


>gi|227112523|ref|ZP_03826179.1| flagellar basal body rod protein FlgG [Pectobacterium carotovorum
           subsp. brasiliensis PBR1692]
          Length = 260

 Score = 61.8 bits (148), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 21/126 (16%), Positives = 35/126 (27%), Gaps = 3/126 (2%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
            +  +  +   +   R  I+S      +    T         T   +  +   G     +
Sbjct: 138 PAITVPANATELNIGRDGIVS---VKVQGQAATNQIGQLTLTTFINDSGLESIGENLYLE 194

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
                +                  V+  NVNV  E   M +T R Y  N + I  S  M+
Sbjct: 195 TASSGAPNETNPGLNGAGLLYQKYVETSNVNVAEELVSMIQTQRAYEINSKAISSSDQML 254

Query: 126 TTTLDL 131
                L
Sbjct: 255 QKLTQL 260



 Score = 46.0 bits (107), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/95 (17%), Positives = 26/95 (27%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I S  IA +GL  Q   M +IS N+AN  T G       +                 + 
Sbjct: 1  MIRSLWIAKTGLNAQQTNMDVISNNLANVSTNGFKRQRAVFEDLMYQTVRQPGAQSSEQT 60

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVL 98
                Q            +       +  N   +
Sbjct: 61 MLPSGLQLGTGVRPVSTERIHTQGTFSETGNSKDV 95


>gi|261419427|ref|YP_003253109.1| flagellar basal body rod protein FlgG [Geobacillus sp. Y412MC61]
 gi|319766242|ref|YP_004131743.1| flagellar hook-basal body protein [Geobacillus sp. Y412MC52]
 gi|261375884|gb|ACX78627.1| fagellar hook-basal body protein [Geobacillus sp. Y412MC61]
 gi|317111108|gb|ADU93600.1| flagellar hook-basal body protein [Geobacillus sp. Y412MC52]
          Length = 265

 Score = 61.8 bits (148), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 14/102 (13%), Positives = 36/102 (35%)

Query: 32  ARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVK 91
              +G        +    +  + +  +G    ++     +               SG ++
Sbjct: 164 VDASGTLSTIGTIQLAKFANNDGLEKAGNNLFRETTNSGTPTTGAPGANGTGTIVSGALE 223

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             NV++  E  +M    R + AN + I  S +++   ++L +
Sbjct: 224 MSNVDLAEEFTEMIVAQRGFQANTRIITTSDEILQELVNLKK 265



 Score = 33.7 bits (75), Expect = 9.8,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 18/42 (42%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S +     +     ++ +I  NIAN  T G   G   ++
Sbjct: 1  MLRSMYSGIGAMRNFQTKLDVIGNNIANVNTYGFKKGRTIFK 42


>gi|169827129|ref|YP_001697287.1| flagellar basal-body rod protein flgG [Lysinibacillus sphaericus
           C3-41]
 gi|168991617|gb|ACA39157.1| Flagellar basal-body rod protein flgG (Distal rod protein)
           [Lysinibacillus sphaericus C3-41]
          Length = 322

 Score = 61.8 bits (148), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 19/122 (15%), Positives = 42/122 (34%), Gaps = 8/122 (6%)

Query: 20  ARMQIISENI---ANARTTGDTPGSDPYRRKTISFEEVMHGSG-----GVRVKKIGVDQS 71
            R+   ++ I   AN          +      +   +  +  G     G   ++     +
Sbjct: 201 IRIPTTAKEISIGANGTIEYVDLNGNRKWAGQLIMAKFPNAGGLAKVGGNYYQQTANSGA 260

Query: 72  TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            + +            G V+  NV++  E  +M    R + AN + I  S +++   ++L
Sbjct: 261 AYAQVATVAGMGKVVPGTVEMSNVDLSEEFTEMIVAQRGFQANTRIITTSDEVLQELVNL 320

Query: 132 LR 133
            R
Sbjct: 321 KR 322



 Score = 36.0 bits (81), Expect = 1.9,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 28/68 (41%), Gaps = 4/68 (5%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR----RKTISFEEVMHGSG 59
          ++ S +   SGL     ++ +I  NIAN  T G   G   ++    +            G
Sbjct: 1  MLRSMYSGISGLKNFQTKLDVIGNNIANVNTVGFKKGRVLFKDLMSQTQAGASAATATRG 60

Query: 60 GVRVKKIG 67
          GV  +++G
Sbjct: 61 GVNPQQVG 68


>gi|261821155|ref|YP_003259261.1| flagellar basal body rod protein FlgG [Pectobacterium wasabiae
           WPP163]
 gi|261605168|gb|ACX87654.1| flagellar basal-body rod protein FlgG [Pectobacterium wasabiae
           WPP163]
          Length = 260

 Score = 61.8 bits (148), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 21/126 (16%), Positives = 36/126 (28%), Gaps = 3/126 (2%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
            +  +  +   +   R  I+S  +   +    T         T   +  +   G     +
Sbjct: 138 PAITVPANATELNIGRDGIVSVKL---QGQAATNQIGQLTLTTFINDSGLESMGENLYLE 194

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
                +                  V+  NVNV  E   M +T R Y  N + I  S  M+
Sbjct: 195 TASSGAPNESNPGLNGAGLLFQKYVETSNVNVAEELVSMIQTQRAYEINSKAISSSDQML 254

Query: 126 TTTLDL 131
                L
Sbjct: 255 QKLTQL 260



 Score = 46.0 bits (107), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/95 (17%), Positives = 26/95 (27%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I S  IA +GL  Q   M +IS N+AN  T G       +                 + 
Sbjct: 1  MIRSLWIAKTGLNAQQTNMDVISNNLANVSTNGFKRQRAVFEDLMYQTVRQPGAQSSEQT 60

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVL 98
                Q            +       +  N   +
Sbjct: 61 MLPSGLQLGTGVRPVSTERIHTQGTFSETGNSKDV 95


>gi|89902479|ref|YP_524950.1| flagellar basal-body rod FlgG [Rhodoferax ferrireducens T118]
 gi|89347216|gb|ABD71419.1| Flagellar basal-body rod FlgG [Rhodoferax ferrireducens T118]
          Length = 260

 Score = 61.8 bits (148), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 22/129 (17%), Positives = 38/129 (29%), Gaps = 3/129 (2%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            +     +  +  ++  A    ++   A    T    G       +      +   G   
Sbjct: 135 PIANGVTVPANATSIAIAGDGTVT---AQVPGTPTPQGIGSISLASFVNPAGLDPKGQNL 191

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
             +                  A   G V+  NVNV+ E   M +T R Y  N + I+ S 
Sbjct: 192 YAESTASGQPNSGTPGADGMGALMQGYVETSNVNVVQELVTMIQTQRAYEMNSKAIQTSD 251

Query: 123 DMMTTTLDL 131
            M+     L
Sbjct: 252 QMLQKLGQL 260



 Score = 41.8 bits (96), Expect = 0.030,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 22/41 (53%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I S  I+ +G+  Q  ++ +IS N+AN  T G    S  +
Sbjct: 1  MINSLWISKTGMEAQQMQLDVISNNLANVSTNGFKRASAVF 41


>gi|114320059|ref|YP_741742.1| flagellar basal-body rod protein FlgG [Alkalilimnicola ehrlichii
           MLHE-1]
 gi|114226453|gb|ABI56252.1| flagellar basal-body rod protein FlgG [Alkalilimnicola ehrlichii
           MLHE-1]
          Length = 261

 Score = 61.4 bits (147), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 21/127 (16%), Positives = 41/127 (32%), Gaps = 3/127 (2%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           L    +I +  ++V   R   +S   A      D       +         +   GG   
Sbjct: 136 LQPPINIPDDAVSVTIGRDGTVS---ARLPGQADPQQLGNIQLADFINPAGLDAMGGNLF 192

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
           ++        + +           G ++  NVN+  E  +M ET R +  N + I  +  
Sbjct: 193 RETAASGPPQISDPGLDGVGTLLQGALESSNVNIAEELVNMIETQRAFETNTKAISSTDQ 252

Query: 124 MMTTTLD 130
           M+    +
Sbjct: 253 MLQFINN 259



 Score = 44.5 bits (103), Expect = 0.005,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 22/41 (53%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  +  +A +GL  Q  RMQ++S N+AN  TTG       +
Sbjct: 1  MNPALWVAKTGLDAQQTRMQVVSNNLANVNTTGFKKDRANF 41


>gi|319944133|ref|ZP_08018411.1| flagellar basal-body rod protein FlgG [Lautropia mirabilis ATCC
           51599]
 gi|319742627|gb|EFV95036.1| flagellar basal-body rod protein FlgG [Lautropia mirabilis ATCC
           51599]
          Length = 260

 Score = 61.4 bits (147), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 24/130 (18%), Positives = 36/130 (27%), Gaps = 3/130 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             L     I      V       +S  IA              +  T      +   G  
Sbjct: 134 MPLSPPITIPPGTRDVTVGNDGTVSVTIA---GQEGVTQIGQIQLATFQNAAGLDPQGQN 190

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
             K+     +                G ++  NVNV+ E   M +T R Y  N + I+ S
Sbjct: 191 VFKESDASGTPTAATPGVNGAGLLQQGYLETSNVNVVEELVSMIQTQRAYEINSKAIQTS 250

Query: 122 HDMMTTTLDL 131
             M+     L
Sbjct: 251 DQMLARISQL 260



 Score = 42.9 bits (99), Expect = 0.013,   Method: Composition-based stats.
 Identities = 15/41 (36%), Positives = 21/41 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I S  IA +GL  Q  +M +IS N+AN  T G       +
Sbjct: 1  MIRSLWIAKTGLDAQQTQMDVISHNLANVSTNGYKRSQAVF 41


>gi|203288201|ref|YP_002223216.1| flagellar basal-body rod protein [Borrelia recurrentis A1]
 gi|201085421|gb|ACH94995.1| flagellar basal-body rod protein [Borrelia recurrentis A1]
          Length = 265

 Score = 61.4 bits (147), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 14/86 (16%), Positives = 26/86 (30%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                  ++  G    K+                      G+++  NV +  E   M   
Sbjct: 179 RFVNPAGLNAIGNNIFKETIGSGEEISGIPGSNGMGKLKQGMLEMSNVAIAEEMVTMIVA 238

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y  N + I  S +M+    +L +
Sbjct: 239 QRAYEINSKAIHTSDNMLGIANNLKK 264



 Score = 42.6 bits (98), Expect = 0.019,   Method: Composition-based stats.
 Identities = 14/98 (14%), Positives = 30/98 (30%), Gaps = 1/98 (1%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG-VR 62
           ++ +   + SG+  Q   +  I+ N++N  T G       +       +           
Sbjct: 1   MMRALWTSASGMKAQQYNVDTIANNLSNVNTIGFKKIRAEFEDLIYQTQRRAGTPATEDT 60

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVE 100
           V  +G       +           +  V   N +V +E
Sbjct: 61  VTPLGNQVGHGTKVSATHRLFEQGNLQVTNLNTDVAIE 98


>gi|312879594|ref|ZP_07739394.1| fagellar hook-basal body protein [Aminomonas paucivorans DSM 12260]
 gi|310782885|gb|EFQ23283.1| fagellar hook-basal body protein [Aminomonas paucivorans DSM 12260]
          Length = 554

 Score = 61.4 bits (147), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 13/66 (19%), Positives = 26/66 (39%), Gaps = 2/66 (3%)

Query: 70  QSTFVEEFDPGHPVAN--ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
            S   +   P    A       ++  NV++  E  ++    R + AN + I  S  ++  
Sbjct: 489 NSGMAQVMTPMEGGAGKIMGSNLEMANVDLSQEFVNLIVAQRGFQANARVITTSDQVLEE 548

Query: 128 TLDLLR 133
            ++L R
Sbjct: 549 LINLKR 554


>gi|297570291|ref|YP_003691635.1| flagellar basal-body rod protein FlgG [Desulfurivibrio alkaliphilus
           AHT2]
 gi|296926206|gb|ADH87016.1| flagellar basal-body rod protein FlgG [Desulfurivibrio alkaliphilus
           AHT2]
          Length = 260

 Score = 61.4 bits (147), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 27/79 (34%)

Query: 55  MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
           +   GG   +           +             ++  NV+V  E  ++  T R +  N
Sbjct: 182 LRAEGGNLFRPTEASGDPIESDPGTDGAGVILQNFIEVSNVDVTEELVNLIITQRAFEMN 241

Query: 115 LQTIKQSHDMMTTTLDLLR 133
            ++++ +  ++     L R
Sbjct: 242 SKSVQTADQLLEVANTLKR 260



 Score = 39.5 bits (90), Expect = 0.18,   Method: Composition-based stats.
 Identities = 14/69 (20%), Positives = 26/69 (37%), Gaps = 5/69 (7%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTP-----GSDPYRRKTISFEEVMHGS 58
          +I + +   +G+  Q  ++  IS N+AN  T G            Y+       E + G 
Sbjct: 1  MIRALYSGTTGMRGQQLQLDTISNNLANVNTAGFKKSRVQFEDLYYQEMRAVGVETVDGG 60

Query: 59 GGVRVKKIG 67
                ++G
Sbjct: 61 QVPSGIQVG 69


>gi|224534580|ref|ZP_03675156.1| flagellar basal-body rod protein FlgG [Borrelia spielmanii A14S]
 gi|224514257|gb|EEF84575.1| flagellar basal-body rod protein FlgG [Borrelia spielmanii A14S]
          Length = 265

 Score = 61.4 bits (147), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 36/111 (32%), Gaps = 3/111 (2%)

Query: 23  QIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHP 82
            I+S  I N+    +    +            ++  G    K+                 
Sbjct: 157 GIVSVKIDNSNEPIELGQIE---ISRFVNPAGLNAIGSNLFKETAGSGQEIAGIPGSEGM 213

Query: 83  VANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
                GI++  NV++  E   M    R Y  N + I+ S +M+    +L R
Sbjct: 214 GRLRQGILEMSNVSIAEEMVTMIVAQRAYEINSKAIQTSDNMLGIANNLKR 264



 Score = 41.8 bits (96), Expect = 0.036,   Method: Composition-based stats.
 Identities = 10/33 (30%), Positives = 18/33 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ +   A SG+  Q   +  I+ N++N  TTG
Sbjct: 1  MMRALWTAASGMTAQQYNVDTIANNLSNVNTTG 33


>gi|126668560|ref|ZP_01739514.1| Flagellar basal body rod protein [Marinobacter sp. ELB17]
 gi|126626965|gb|EAZ97608.1| Flagellar basal body rod protein [Marinobacter sp. ELB17]
          Length = 262

 Score = 61.4 bits (147), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 20/131 (15%), Positives = 38/131 (29%), Gaps = 4/131 (3%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            L  + +I  +   V   R   ++   A                      + +   G   
Sbjct: 135 ALEPNINIPENATNVTIGRDGTVT---AVTDDQAAPINLGQITLVDFINPQGLQAIGNNL 191

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
            K+          E       +   G ++  NV V+ E  +M  T R Y  N + +    
Sbjct: 192 FKQTNASGDPTEGEPGLAGLGSLEQGSIESSNVEVVEELVNMITTQRAYEMNSKVVSTVD 251

Query: 123 DMMT-TTLDLL 132
            M+   T ++ 
Sbjct: 252 QMLQFITNNIG 262



 Score = 42.6 bits (98), Expect = 0.016,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 21/42 (50%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          +  +  ++ +GL+ Q   M  IS N+AN  TTG       ++
Sbjct: 1  MNPALWVSKTGLSAQDTNMSTISNNLANVNTTGFKRDRAVFQ 42


>gi|330875986|gb|EGH10135.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
 gi|330967093|gb|EGH67353.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv.
           actinidiae str. M302091]
          Length = 262

 Score = 61.4 bits (147), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 18/128 (14%), Positives = 38/128 (29%), Gaps = 2/128 (1%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            L  +  +  +       +   +S  +A A  T    G+   +         +   GG  
Sbjct: 135 ALEPAIVVPQNAQTFTVGQDGTVSVTLAGATATSQVIGN--IQTADFINPAGLQAIGGNL 192

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
             +     +  +               ++  NV+ + E  +M  T R Y  N + I  + 
Sbjct: 193 YLETASSGAPQIGTPGLNGLGPTLQNTLENSNVSTVEELVNMITTQRAYEMNSKVISTAD 252

Query: 123 DMMTTTLD 130
            M+     
Sbjct: 253 QMLQNLTQ 260



 Score = 39.5 bits (90), Expect = 0.16,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 23/42 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ + ++A +GLA Q   +  IS N+AN  TTG       ++
Sbjct: 1  MLPALYVAKTGLAAQDTNLTTISNNLANVSTTGFKSDRAEFQ 42


>gi|329297209|ref|ZP_08254545.1| Flagellar basal-body rod protein flgG [Plautia stali symbiont]
          Length = 260

 Score = 61.4 bits (147), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 20/129 (15%), Positives = 37/129 (28%), Gaps = 3/129 (2%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            +     I  +  ++  AR  +++      +              T   +  +   G   
Sbjct: 135 PVQPGITIPANATSITIARDGVVT---VTQQGQTQPAQVGQLTLSTFMNDAGLDSVGENL 191

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
            ++     +                  V+  NVNV  E   M +T R Y  N + I  S 
Sbjct: 192 YQETQASGAPTESTPGQNGAGLLYQSYVETSNVNVAEELVTMIQTQRAYEINSKAISTSD 251

Query: 123 DMMTTTLDL 131
            M+     L
Sbjct: 252 QMLQKLTQL 260



 Score = 44.5 bits (103), Expect = 0.004,   Method: Composition-based stats.
 Identities = 17/95 (17%), Positives = 28/95 (29%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I S  IA +GL  Q   M +I+ N+AN  T G       +                 + 
Sbjct: 1  MIRSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRSRAVFEDLMYQTLRQPGAQSSEQT 60

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVL 98
                Q            + N   + +  N   +
Sbjct: 61 TLPSGLQIGTGVRPVTTERLHNQGNLSQTSNSKNV 95


>gi|300722680|ref|YP_003711970.1| flagellar basal-body rod cell-distal protein [Xenorhabdus
           nematophila ATCC 19061]
 gi|297629187|emb|CBJ89783.1| flagellar biosynthesis; cell-distal portion of basal-body rod
           [Xenorhabdus nematophila ATCC 19061]
          Length = 260

 Score = 61.4 bits (147), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 24/127 (18%), Positives = 38/127 (29%), Gaps = 3/127 (2%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           + +  I ++   +  AR  IIS N+                  T   E  +   G     
Sbjct: 137 VPAIIIPDNATKIGIARDGIISVNVQGQNAPQQVGQLT---LTTFINESGLESIGENLYL 193

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           +                      G V+  NVNV  E  +M +  R Y  N + +  S  M
Sbjct: 194 ETNSSGVPVENAPGINGTGLLYQGYVETSNVNVAEELVNMIQVQRAYEINSKAVSTSDQM 253

Query: 125 MTTTLDL 131
           +     L
Sbjct: 254 LQKLTQL 260



 Score = 41.4 bits (95), Expect = 0.043,   Method: Composition-based stats.
 Identities = 15/38 (39%), Positives = 21/38 (55%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGS 41
          +I S  IA +GL VQ   M +I+ N+AN  T+G     
Sbjct: 1  MIRSLWIAKTGLDVQQTNMDVIANNLANVSTSGFKRQR 38


>gi|296282281|ref|ZP_06860279.1| flagellar basal-body rod protein FlgC [Citromicrobium bathyomarinum
           JL354]
          Length = 130

 Score = 61.4 bits (147), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 32/130 (24%), Positives = 60/130 (46%), Gaps = 2/130 (1%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG--GVR 62
           ++   +    ++ Q  RM   + N+ANA +   +        +T+  EE+   SG   VR
Sbjct: 1   MSMFQMGYRAMSAQMVRMNAAASNLANAGSVAGSADEAYRPIRTVFAEELDKQSGLSSVR 60

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
           V ++    +  V   DPGHP+A+ +G V    V+   E  +M E +R Y   ++ +  + 
Sbjct: 61  VDRVVRSDTAPVRRHDPGHPLADENGDVWEAPVDENAEMIEMLEASRQYSNMVEAMSTAK 120

Query: 123 DMMTTTLDLL 132
            +M  T+ + 
Sbjct: 121 QLMLETMRMK 130


>gi|307718427|ref|YP_003873959.1| flagellar hook-basal body complex protein [Spirochaeta thermophila
           DSM 6192]
 gi|306532152|gb|ADN01686.1| flagellar hook-basal body complex protein [Spirochaeta thermophila
           DSM 6192]
          Length = 280

 Score = 61.4 bits (147), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 24/57 (42%)

Query: 74  VEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             E           G ++  NVN + E   M E NR Y AN +TI+    ++   ++
Sbjct: 219 EAEILQEGRPKVRQGFLEGSNVNPVTEMVQMIEVNRAYEANQKTIETQDTLLGRLIN 275



 Score = 44.9 bits (104), Expect = 0.004,   Method: Composition-based stats.
 Identities = 14/43 (32%), Positives = 22/43 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR 46
          +I   +I  SG+A Q  RM  I+ N+AN   TG    +  ++ 
Sbjct: 1  MIRGYYIGASGMASQLNRMDAIANNLANVDLTGYKRDTAIFKA 43


>gi|126653740|ref|ZP_01725658.1| flagellar hook protein [Bacillus sp. B14905]
 gi|126589704|gb|EAZ83840.1| flagellar hook protein [Bacillus sp. B14905]
          Length = 329

 Score = 61.4 bits (147), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 20/122 (16%), Positives = 43/122 (35%), Gaps = 8/122 (6%)

Query: 20  ARMQIISENI---ANARTTGDTPGSDPYRRKTISFEEVMH-----GSGGVRVKKIGVDQS 71
            R+   ++ I   AN          +      +   +  +      SGG   ++     +
Sbjct: 208 IRIPTTAKEISIGANGTIEYVDLNGERKWAGQLIMAKFPNAGGLAKSGGNYYQQTANSGA 267

Query: 72  TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            + +            G V+  NV++  E  +M    R + AN + I  S +++   ++L
Sbjct: 268 AYGQVATVAGMGKVVPGAVEMSNVDLSEEFTEMIVAQRGFQANTRIITTSDEVLQELVNL 327

Query: 132 LR 133
            R
Sbjct: 328 KR 329



 Score = 35.6 bits (80), Expect = 2.1,   Method: Composition-based stats.
 Identities = 16/71 (22%), Positives = 29/71 (40%), Gaps = 4/71 (5%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR----RKTISFEEVMHGSG 59
          ++ S +   SGL     ++ +I  NIAN  T G   G   ++    +            G
Sbjct: 8  MLRSMYSGISGLKNFQTKLDVIGNNIANVNTVGFKKGRVLFKDLMSQTQAGASAATATRG 67

Query: 60 GVRVKKIGVDQ 70
          GV  +++G+  
Sbjct: 68 GVNPQQVGLGT 78


>gi|94500243|ref|ZP_01306776.1| flagellar basal-body rod protein FlgG [Oceanobacter sp. RED65]
 gi|94427542|gb|EAT12519.1| flagellar basal-body rod protein FlgG [Oceanobacter sp. RED65]
          Length = 261

 Score = 61.4 bits (147), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 12/82 (14%), Positives = 24/82 (29%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +   GG    +     +  +         +   G ++  NV V+ E   M    
Sbjct: 178 FINPTGLQAVGGNLFLETAASGAPEIGVASEDGFGSIEQGFLENSNVKVVEEMVKMITVQ 237

Query: 109 RLYMANLQTIKQSHDMMTTTLD 130
           R Y  N + +  +  M+     
Sbjct: 238 RAYEMNSKVVSSADQMLQYLAQ 259



 Score = 39.9 bits (91), Expect = 0.13,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 20/41 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          + ++  ++ +GL  Q   +  IS N+AN  TTG       +
Sbjct: 1  MHSALWVSKTGLNAQDHGLTTISNNLANVSTTGFKKDRAVF 41


>gi|114777402|ref|ZP_01452399.1| hypothetical protein SPV1_13919 [Mariprofundus ferrooxydans PV-1]
 gi|114552184|gb|EAU54686.1| hypothetical protein SPV1_13919 [Mariprofundus ferrooxydans PV-1]
          Length = 467

 Score = 61.4 bits (147), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 23/135 (17%), Positives = 50/135 (37%), Gaps = 2/135 (1%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR--RKTISFEEVMHGS 58
           M    A+  ++  G A           +   + T  +      ++        + V++  
Sbjct: 333 MAGAFATRQVSKDGYAAGFLDTLTTDSSGTVSGTFTNGQRRALFQVALAKFPNDAVLNHV 392

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
           GG  +++     S  +E+   G         ++  NV++  E   +    R Y AN +TI
Sbjct: 393 GGNLMQETIQSGSPVLEKPGNGGMGTITPYGLEQSNVDLAAEFVKLIVVQRGYEANSKTI 452

Query: 119 KQSHDMMTTTLDLLR 133
             +  M+++ + L R
Sbjct: 453 LTTDQMLSSLMQLKR 467


>gi|312792656|ref|YP_004025579.1| fagellar hook-basal body protein [Caldicellulosiruptor
           kristjanssonii 177R1B]
 gi|312179796|gb|ADQ39966.1| fagellar hook-basal body protein [Caldicellulosiruptor
           kristjanssonii 177R1B]
          Length = 494

 Score = 61.4 bits (147), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 17/86 (19%), Positives = 31/86 (36%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
           T +    +   G              +     G       G ++  NV++  E  DM  T
Sbjct: 409 TFANPAGLQRIGDNLYINTPNSGDPEIGIPGTGSRGTIFQGTLEMSNVDLAKEFTDMIVT 468

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y AN + I  S +++   +++ R
Sbjct: 469 QRGYQANARVITASDELLQDLVNIKR 494



 Score = 42.6 bits (98), Expect = 0.019,   Method: Composition-based stats.
 Identities = 20/74 (27%), Positives = 30/74 (40%), Gaps = 6/74 (8%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR------RKTISFEEVMHG 57
          ++ S   + S L     RM +I +NIAN  T G       +        K+ S  +   G
Sbjct: 1  MMRSMFSSISALRAHQTRMDVIGDNIANVNTVGFKSSRVTFASVFASVLKSASAPDTASG 60

Query: 58 SGGVRVKKIGVDQS 71
           GG    +IG+  S
Sbjct: 61 RGGSNPMQIGLGVS 74


>gi|37681979|gb|AAQ97867.1| FlgG [Photorhabdus luminescens]
          Length = 150

 Score = 61.4 bits (147), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 18/128 (14%), Positives = 37/128 (28%), Gaps = 3/128 (2%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +  +  I ++   +  +   I+S      +          +   T   +  +   G    
Sbjct: 26  IFPTITIPDNATDLTISSDGIVS---VKVQGQSVPQQVGQFTLTTFINDSGLESIGENLY 82

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
            +                        V+  NVN+  E  +M +T R Y  N + +  S  
Sbjct: 83  VETSSSGVPIENTPGINGAGLLQHKYVETSNVNIAEELVNMIQTQRAYEVNSKAVSTSDQ 142

Query: 124 MMTTTLDL 131
           M+     L
Sbjct: 143 MLQKLTQL 150


>gi|226225729|ref|YP_002759835.1| flagellar hook protein FlgE [Gemmatimonas aurantiaca T-27]
 gi|226088920|dbj|BAH37365.1| flagellar hook protein FlgE [Gemmatimonas aurantiaca T-27]
          Length = 506

 Score = 61.4 bits (147), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 24/53 (45%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
                 SG ++  NV++  E  +M    R + AN + +  S +M+   + + R
Sbjct: 454 SQSQMTSGALEMSNVDLAQEFTNMIVAQRGFQANGKVVSTSDEMLQELMTIKR 506



 Score = 39.9 bits (91), Expect = 0.12,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 21/59 (35%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
          ++ S +   SGL     RM +I  NIAN  T     G   ++              G +
Sbjct: 1  MLRSLYAGVSGLRNNQVRMDVIGNNIANVNTVAFKAGRVTFKEGFAQLLAGASRPPGDQ 59


>gi|186477699|ref|YP_001859169.1| flagellar basal body rod protein FlgG [Burkholderia phymatum
           STM815]
 gi|184194158|gb|ACC72123.1| flagellar basal-body rod protein FlgG [Burkholderia phymatum
           STM815]
          Length = 262

 Score = 61.4 bits (147), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 22/127 (17%), Positives = 42/127 (33%), Gaps = 3/127 (2%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           + +  I  +  ++      ++S   A    +  T      +  T      +   G     
Sbjct: 137 LPAITIPQNATSLTIGSDGVVSVTTA---GSTATTQIGSLQIATFINPTGLDAKGENLFA 193

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           +     +  V             G V+  NVNV+ E  +M +T R Y  N + +  S  M
Sbjct: 194 ETTSSGTPNVATPGLNGAGTLNQGYVEASNVNVVQELVNMIQTQRAYEINSKAVTTSDQM 253

Query: 125 MTTTLDL 131
           + T   +
Sbjct: 254 LQTLSQM 260



 Score = 41.4 bits (95), Expect = 0.048,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 21/41 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  S +IA +G+  Q A+M  IS N+AN  T G       +
Sbjct: 1  MNRSLYIAATGMNAQQAQMDTISNNLANVSTNGFKGSRAVF 41


>gi|295399817|ref|ZP_06809798.1| fagellar hook-basal body protein [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|294978220|gb|EFG53817.1| fagellar hook-basal body protein [Geobacillus thermoglucosidasius
           C56-YS93]
          Length = 334

 Score = 61.4 bits (147), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 14/86 (16%), Positives = 32/86 (37%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                  +  +G    +      +  +         A  SG ++  NV++  E  +M   
Sbjct: 249 KFPNNGGLEKAGANLYRDTPNSGTPILNFAGAAGIGAIQSGALEMSNVDLAEEFTEMIVA 308

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R + AN + I  S +++   ++L +
Sbjct: 309 QRGFQANTRIITTSDEILQELVNLKK 334



 Score = 34.8 bits (78), Expect = 3.9,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 19/42 (45%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S +   + +     ++ +I  NIAN  T G   G   ++
Sbjct: 1  MLRSMYSGINAMKNFQVKLDVIGNNIANVNTYGFKKGRTIFQ 42


>gi|227328340|ref|ZP_03832364.1| flagellar basal body rod protein FlgG [Pectobacterium carotovorum
           subsp. carotovorum WPP14]
 gi|253688970|ref|YP_003018160.1| flagellar basal-body rod protein FlgG [Pectobacterium carotovorum
           subsp. carotovorum PC1]
 gi|251755548|gb|ACT13624.1| flagellar basal-body rod protein FlgG [Pectobacterium carotovorum
           subsp. carotovorum PC1]
          Length = 260

 Score = 61.4 bits (147), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 21/126 (16%), Positives = 35/126 (27%), Gaps = 3/126 (2%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
            +  +  +   +   R  I+S      +    T         T   +  +   G     +
Sbjct: 138 PAITVPANATELNIGRDGIVS---VKVQGQAATNQIGQLTLTTFINDSGLESMGENLYLE 194

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
                +                  V+  NVNV  E   M +T R Y  N + I  S  M+
Sbjct: 195 TASSGAPNETNPGLNGAGLLYQKYVETSNVNVAEELVSMIQTQRAYEINSKAISSSDQML 254

Query: 126 TTTLDL 131
                L
Sbjct: 255 QKLTQL 260



 Score = 45.6 bits (106), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/95 (17%), Positives = 26/95 (27%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I S  IA +GL  Q   M +IS N+AN  T G       +                 + 
Sbjct: 1  MIRSLWIAKTGLNAQQTNMDVISNNLANVSTNGFKRQRAVFEDLMYQTVRQPGAQSSEQT 60

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVL 98
                Q            +       +  N   +
Sbjct: 61 MLPSGLQLGTGVRPVSTERIHTQGTFSETGNSKDV 95


>gi|284007173|emb|CBA72457.1| flagellar basal-body rod protein FlgG [Arsenophonus nasoniae]
          Length = 260

 Score = 61.4 bits (147), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 18/87 (20%), Positives = 26/87 (29%)

Query: 45  RRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
              T   E  +   G     +                      G V+  NVNV  E   M
Sbjct: 174 ALTTFVNETGLESIGENLYLETNSSGVPVETAPGVNGAGLLYQGYVETSNVNVAEELVSM 233

Query: 105 RETNRLYMANLQTIKQSHDMMTTTLDL 131
            +T R Y  N + +  S  M+   + L
Sbjct: 234 IQTQRAYEINSKAVSTSDQMLQRLMQL 260



 Score = 46.8 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/42 (38%), Positives = 22/42 (52%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          +I S  IA +GL  Q   M +IS N+AN  T G   G   ++
Sbjct: 1  MIRSLWIAKTGLDAQQTNMDVISNNLANVSTNGFKRGRAVFQ 42


>gi|216263448|ref|ZP_03435443.1| flagellar basal-body rod protein FlgG [Borrelia afzelii ACA-1]
 gi|215980292|gb|EEC21113.1| flagellar basal-body rod protein FlgG [Borrelia afzelii ACA-1]
          Length = 265

 Score = 61.4 bits (147), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 35/111 (31%), Gaps = 3/111 (2%)

Query: 23  QIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHP 82
            I+S  I N+    +    +            +   G    K+                 
Sbjct: 157 GIVSVKIDNSNEPIELGQIE---ISRFVNPAGLSAIGSNLFKETAGSGQEIAGIPGSKGM 213

Query: 83  VANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
                GI++  NV++  E   M    R Y  N + I+ S +M+    +L R
Sbjct: 214 GKLRQGILEMSNVSIAEEMVTMIVAQRAYEINSKAIQTSDNMLGIANNLKR 264



 Score = 42.2 bits (97), Expect = 0.026,   Method: Composition-based stats.
 Identities = 10/33 (30%), Positives = 18/33 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ +   A SG+  Q   +  I+ N++N  TTG
Sbjct: 1  MMRALWTAASGMTAQQYNVDTIANNLSNVNTTG 33


>gi|50120641|ref|YP_049808.1| flagellar basal body rod protein FlgG [Pectobacterium atrosepticum
           SCRI1043]
 gi|49611167|emb|CAG74613.1| flagellar basal-body rod protein [Pectobacterium atrosepticum
           SCRI1043]
          Length = 260

 Score = 61.4 bits (147), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 21/126 (16%), Positives = 35/126 (27%), Gaps = 3/126 (2%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
            +  +  +   +   R  I+S      +    T         T   +  +   G     +
Sbjct: 138 PAITVPANATELNIGRDGIVS---VKVQGQAATNQIGQLTLTTFINDSGLESMGENLYLE 194

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
                +                  V+  NVNV  E   M +T R Y  N + I  S  M+
Sbjct: 195 TASSGAPNETNPGLNGAGLLYQKYVETSNVNVAEELVSMIQTQRAYEINSKAISSSDQML 254

Query: 126 TTTLDL 131
                L
Sbjct: 255 QKLTQL 260



 Score = 45.2 bits (105), Expect = 0.003,   Method: Composition-based stats.
 Identities = 17/95 (17%), Positives = 26/95 (27%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I S  IA +GL  Q   M +IS N+AN  T G       +                 + 
Sbjct: 1  MIRSLWIAKTGLNAQQTNMDVISNNLANVSTNGFKRQRAVFEDLMYQTIRQPGAQSSEQT 60

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVL 98
                Q            +       +  N   +
Sbjct: 61 MLPSGLQLGTGVRPVSTERIHTQGTFSETGNSKDV 95


>gi|254698165|ref|ZP_05159993.1| flagellar basal body rod protein FlgG [Brucella abortus bv. 2 str.
           86/8/59]
          Length = 246

 Score = 61.4 bits (147), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 18/126 (14%), Positives = 39/126 (30%), Gaps = 3/126 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
           + +  +  I    + V       +    A  +   +            + E  +   GG 
Sbjct: 118 NPVEPAITIPPDAIEVTITDTGQV---FAKLQDQINQVDLGQLTLANFTNEAGLEPLGGN 174

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
             ++        V         +   G ++  NV+ + E  D+    R Y  N + I+ +
Sbjct: 175 LYRETEASGGPLVGVPGDPGYGSIKQGYLEASNVDPVKEITDLITAQRAYEMNSKVIQAA 234

Query: 122 HDMMTT 127
            +M  T
Sbjct: 235 DEMAAT 240


>gi|225551864|ref|ZP_03772807.1| flagellar basal-body rod protein FlgG [Borrelia sp. SV1]
 gi|225371659|gb|EEH01086.1| flagellar basal-body rod protein FlgG [Borrelia sp. SV1]
          Length = 265

 Score = 61.4 bits (147), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 34/111 (30%), Gaps = 3/111 (2%)

Query: 23  QIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHP 82
            I+S  I N     +    +            +   G    K+                 
Sbjct: 157 GIVSVKIDNNNEPIELGQIE---ISRFVNPAGLSAIGSNLFKETAGSGQEIAGIPGSEGM 213

Query: 83  VANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
                GI++  NV++  E   M    R Y  N + I+ S +M+    +L R
Sbjct: 214 GRLRQGILEMSNVSIAEEMVTMIVAQRAYEINSKAIQTSDNMLGIANNLKR 264



 Score = 41.8 bits (96), Expect = 0.031,   Method: Composition-based stats.
 Identities = 10/33 (30%), Positives = 18/33 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ +   A SG+  Q   +  I+ N++N  TTG
Sbjct: 1  MMRALWTAASGMTAQQYNVDTIANNLSNVNTTG 33


>gi|20807880|ref|NP_623051.1| flagellar basal body and hook proteins [Thermoanaerobacter
           tengcongensis MB4]
 gi|254478868|ref|ZP_05092232.1| Flagellar basal body protein FlgE [Carboxydibrachium pacificum DSM
           12653]
 gi|20516445|gb|AAM24655.1| Flagellar basal body and hook proteins [Thermoanaerobacter
           tengcongensis MB4]
 gi|214035181|gb|EEB75891.1| Flagellar basal body protein FlgE [Carboxydibrachium pacificum DSM
           12653]
          Length = 415

 Score = 61.4 bits (147), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 30/85 (35%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +   G              +     G   +   G ++  NVN+  E  DM  T 
Sbjct: 331 FQNPMGLEKVGNTMFINTVNSGEPMIGAAGSGTRGSINPGTLEMSNVNLANEFVDMITTQ 390

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R + AN + I  S +M+   +++ R
Sbjct: 391 RGFQANAKVITVSDEMLQDLVNMKR 415



 Score = 40.6 bits (93), Expect = 0.065,   Method: Composition-based stats.
 Identities = 14/42 (33%), Positives = 21/42 (50%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S + A SGL    AR+ +I  NIAN  T G       ++
Sbjct: 1  MLRSMYSAISGLQAHQARLDVIGNNIANVNTVGYKASRMTFK 42


>gi|319649558|ref|ZP_08003714.1| flagellar hook protein [Bacillus sp. 2_A_57_CT2]
 gi|317398720|gb|EFV79402.1| flagellar hook protein [Bacillus sp. 2_A_57_CT2]
          Length = 268

 Score = 61.0 bits (146), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 31/102 (30%)

Query: 32  ARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVK 91
                    + P      +    +   G    K                      SG ++
Sbjct: 167 IDGNDTLQAAGPIGIARFNNNGGLEKIGDNLYKDTVNSGDAVPLTPGEDGAGILVSGTLE 226

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             NV++  E  +M    R + AN + I  S +++   ++L R
Sbjct: 227 MSNVDLSEEFTEMITAQRGFQANTRIITTSDEILQELVNLKR 268



 Score = 36.8 bits (83), Expect = 1.0,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 20/42 (47%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S +   SG+     ++ +I  NIAN  T G   G   ++
Sbjct: 1  MLRSMYSGISGMKNFQTKLDVIGNNIANVNTFGYKKGRVNFK 42


>gi|224370760|ref|YP_002604924.1| flagellar basal body rod protein FlgG [Desulfobacterium
           autotrophicum HRM2]
 gi|223693477|gb|ACN16760.1| FlgG2 [Desulfobacterium autotrophicum HRM2]
          Length = 260

 Score = 61.0 bits (146), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 24/47 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  ++  NV+V+ E  +M    R Y AN ++I+ +  M+     L R
Sbjct: 214 NNFLEMSNVSVVEEMVNMIVGQRAYEANSKSIQTADTMLGLANGLKR 260



 Score = 41.8 bits (96), Expect = 0.032,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 21/42 (50%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          +I +   + +G+  Q  +  +++ N+AN+ T G       ++
Sbjct: 1  MIRALWTSATGMNAQQIQTDVVANNLANSSTAGFKKSRANFQ 42


>gi|189426330|ref|YP_001953507.1| flagellar basal body rod protein FlgG [Geobacter lovleyi SZ]
 gi|189422589|gb|ACD96987.1| flagellar basal-body rod protein FlgG [Geobacter lovleyi SZ]
          Length = 262

 Score = 61.0 bits (146), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 17/104 (16%), Positives = 31/104 (29%)

Query: 30  ANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGI 89
           A              +    +    +   G    ++     +                G 
Sbjct: 159 AVQSGQSTASTVGNIQIANFTNPAGLSSMGKNFYQQTDASGNATTGTPGQTGLGTITQGF 218

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  NV+V  E  +M    R Y AN + I  S +M+    +L R
Sbjct: 219 LEMSNVDVATEMVNMIIGQRAYEANSKAITTSDEMLQLANNLKR 262



 Score = 39.9 bits (91), Expect = 0.11,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 22/42 (52%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S   A SG+  Q+  + +I+ N+AN  TTG       ++
Sbjct: 1  MMRSLWTAASGMNTQTQNINVIANNLANVNTTGFKKSRADFQ 42


>gi|237751406|ref|ZP_04581886.1| flagellar hook-associated protein FlgK [Helicobacter bilis ATCC
           43879]
 gi|229372772|gb|EEO23163.1| flagellar hook-associated protein FlgK [Helicobacter bilis ATCC
           43879]
          Length = 606

 Score = 61.0 bits (146), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 19/119 (15%), Positives = 35/119 (29%), Gaps = 4/119 (3%)

Query: 19  SARMQIISEN--IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEE 76
              +  +S N  IAN          + Y+ K       ++         +          
Sbjct: 488 RPWLMPVSGNFDIANMMQQLQYDEVEFYQNKLDKKHMKLNEFYQYTTGAVANQTQEVKIT 547

Query: 77  FDPGHP--VANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            D       A     +    V+V  E  ++ +    Y AN + I     M+ T L + +
Sbjct: 548 LDTKKSVLEAIKKEHLAISQVSVDEEMVNLIKFQGGYAANAKVITTIDRMIETLLGIKQ 606



 Score = 45.6 bits (106), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 27/74 (36%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  +++S H + +GL      + +   NIANA     T        +   +    +   G
Sbjct: 1  MGGILSSLHTSTTGLHAHQLMVDVTGNNIANASDEFYTRQRVIVHPEAPLYFPDYNLGRG 60

Query: 61 VRVKKIGVDQSTFV 74
          V V  I      FV
Sbjct: 61 VNVDSIQRLHDEFV 74


>gi|21672606|ref|NP_660673.1| flagellar basal body rod protein FlgG [Buchnera aphidicola str. Sg
           (Schizaphis graminum)]
 gi|25008454|sp|Q8K9K4|FLGG_BUCAP RecName: Full=Flagellar basal-body rod protein flgG; AltName:
           Full=Distal rod protein
 gi|21623237|gb|AAM67884.1| flagellar basal-body rod protein FlgG [Buchnera aphidicola str. Sg
           (Schizaphis graminum)]
          Length = 260

 Score = 61.0 bits (146), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 17/83 (20%), Positives = 27/83 (32%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +   G    ++     +                G V+  NVNV  E  +M +T 
Sbjct: 178 FVNHSGLESLGENLYQETQASGNPIDTTPGLNGTGLLYQGYVETSNVNVAEELVNMIQTQ 237

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y  N ++I  S  M+     L
Sbjct: 238 RAYEINSKSINTSDQMLQKLSQL 260



 Score = 43.3 bits (100), Expect = 0.012,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 20/41 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I S  I+ +GL  Q   M +IS N+AN  T G       +
Sbjct: 1  MIPSLWISKTGLDAQQINMNVISNNLANVSTNGFKRSRAVF 41


>gi|311068150|ref|YP_003973073.1| flagellar basal body rod protein FlgG [Bacillus atrophaeus 1942]
 gi|310868667|gb|ADP32142.1| flagellar basal body rod protein FlgG [Bacillus atrophaeus 1942]
          Length = 264

 Score = 61.0 bits (146), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 25/48 (52%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            SG ++  NV++  E  +M    R + +N + I  S +++   ++L R
Sbjct: 217 KSGFLEMSNVDLTDEFTEMIVAQRGFQSNSKIITTSDEILQELVNLKR 264



 Score = 36.4 bits (82), Expect = 1.3,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 19/42 (45%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S +   SG+     ++ +I  NIAN  T G       ++
Sbjct: 1  MLRSLYSGISGMKNFQTKLDVIGNNIANVNTVGFKKSRVTFK 42


>gi|149927800|ref|ZP_01916051.1| flagellar basal body rod protein FlgG [Limnobacter sp. MED105]
 gi|149823422|gb|EDM82653.1| flagellar basal body rod protein FlgG [Limnobacter sp. MED105]
          Length = 260

 Score = 61.0 bits (146), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 29/102 (28%)

Query: 30  ANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGI 89
           A  +           +  +      +   G     +     +              + G 
Sbjct: 159 AVVQGQVQPQELGQIQLASFVNPAGLFSMGQNLYSETAASGAPTQAVAGTNGVGFVSQGF 218

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           V+  NVNV+ E   + +  R Y  N + I  S  M+     L
Sbjct: 219 VETSNVNVVEELVGLIQAQRAYEINSKAISTSDQMLQRLSQL 260



 Score = 42.9 bits (99), Expect = 0.016,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 21/41 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          ++ S  IA +GL  Q  ++ +IS N+AN  T G       +
Sbjct: 1  MMRSLWIAKTGLDAQQTQLDVISNNLANTATNGFKRSRAVF 41


>gi|110677663|ref|YP_680670.1| flagellar basal body rod protein FlgG [Roseobacter denitrificans
           OCh 114]
 gi|109453779|gb|ABG29984.1| flagellar basal-body rod protein FlgG [Roseobacter denitrificans
           OCh 114]
          Length = 261

 Score = 61.0 bits (146), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 18/116 (15%), Positives = 36/116 (31%)

Query: 16  AVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVE 75
             +S  +    E  A      D      +     +  + +   GG    +     +  V 
Sbjct: 145 DARSISINTSGEVFAYFSDATDAELLGQFNLAGFTNAKGLEALGGNLFAETEASGAAIVS 204

Query: 76  EFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
                       G ++  +V+ + E  ++ E  R Y  N + I  +  MM  T  +
Sbjct: 205 TPGEDGLGTVRQGYLESSSVDAVREITELIEAQRGYEMNAKVISAADQMMGATTQI 260



 Score = 42.9 bits (99), Expect = 0.016,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 22/41 (53%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          + +  IA +G++ Q  R++ IS N++N  TTG       + 
Sbjct: 1  MRALKIAATGMSAQQMRVETISNNLSNMSTTGYNARRAEFA 41


>gi|332284021|ref|YP_004415932.1| flagellar basal body rod protein FlgG [Pusillimonas sp. T7-7]
 gi|330427974|gb|AEC19308.1| flagellar basal body rod protein FlgG [Pusillimonas sp. T7-7]
          Length = 261

 Score = 61.0 bits (146), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 25/131 (19%), Positives = 43/131 (32%), Gaps = 6/131 (4%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            +    +I ++ L +  AR  ++S      +        +  + +  +F           
Sbjct: 135 PIQPPINIPDNALTITIARDGMVS----VTQPGATGANVEVGQLQLNTFINPTGLQSAGE 190

Query: 63  VKKIGVDQSTFVEEFDPGHPVANA--SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
              +  D S       PG   A        +  NVNV  E  +M  T R Y  N + I+ 
Sbjct: 191 NLYVETDASGPANFAQPGLDGAGLVLQQYTETSNVNVAEELVNMITTQRAYEMNSKAIET 250

Query: 121 SHDMMTTTLDL 131
           S  M+     L
Sbjct: 251 SDQMLARLTQL 261



 Score = 40.6 bits (93), Expect = 0.069,   Method: Composition-based stats.
 Identities = 16/41 (39%), Positives = 21/41 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I S  IA +GL  Q   M +IS N+AN  TTG       +
Sbjct: 1  MIRSLWIAKTGLESQQTNMDVISNNLANVNTTGFKRSRANF 41


>gi|269976274|ref|ZP_06183270.1| flagellar hook protein FlgE [Mobiluncus mulieris 28-1]
 gi|269935603|gb|EEZ92141.1| flagellar hook protein FlgE [Mobiluncus mulieris 28-1]
          Length = 472

 Score = 61.0 bits (146), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 19/100 (19%), Positives = 39/100 (39%)

Query: 34  TTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
           + GDT         + S    +  +G     + G      + E   G   A   G ++  
Sbjct: 373 SNGDTRALAKIATASFSNPLGLEKAGASYFVESGNSGQPQIGEPGSGTRGAMTGGAIEMS 432

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           NV++  E  ++  + R + AN + I  S +++   + + R
Sbjct: 433 NVDLAAEFTNLILSQRGFQANTRVITTSDEILQELVSMKR 472



 Score = 37.9 bits (86), Expect = 0.46,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 29/69 (42%), Gaps = 5/69 (7%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY-----RRKTISFEEVMHGS 58
          ++ S     SGL+V    + + S NIAN  TTG    S  +     +         ++  
Sbjct: 1  MLRSLFTGISGLSVHQTMLDVTSNNIANVNTTGFKSASTRFEDTFSQLVKSGAAPRLNER 60

Query: 59 GGVRVKKIG 67
          GG+   ++G
Sbjct: 61 GGMNPAQVG 69


>gi|295678056|ref|YP_003606580.1| flagellar basal-body rod protein FlgG [Burkholderia sp. CCGE1002]
 gi|295437899|gb|ADG17069.1| flagellar basal-body rod protein FlgG [Burkholderia sp. CCGE1002]
          Length = 262

 Score = 61.0 bits (146), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 23/127 (18%), Positives = 44/127 (34%), Gaps = 3/127 (2%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           I +  I  +  ++       +S  +A    + +T      +  T      +   G     
Sbjct: 137 IPAITIPANATSLTIGSDGSVSITVA---GSSNTQQLGTMQLATFINPAGLDSKGENLFA 193

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           +     +  V +           G V+  NVNV+ E  +M +T R Y  N + +  S  M
Sbjct: 194 ETASSGAPNVAQPGLNGAGTLNQGYVEASNVNVVQELVNMIQTQRAYEINSKAVTTSDQM 253

Query: 125 MTTTLDL 131
           + T   +
Sbjct: 254 LQTLSQM 260



 Score = 40.2 bits (92), Expect = 0.093,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 22/41 (53%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  S +IA +G+  Q A+M +IS N+AN  T G       +
Sbjct: 1  MNRSLYIAATGMNAQQAQMDVISNNLANVSTNGFKGSRAVF 41


>gi|224825166|ref|ZP_03698272.1| flagellar basal-body rod protein FlgG [Lutiella nitroferrum 2002]
 gi|224602837|gb|EEG09014.1| flagellar basal-body rod protein FlgG [Lutiella nitroferrum 2002]
          Length = 260

 Score = 61.0 bits (146), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 19/128 (14%), Positives = 42/128 (32%), Gaps = 3/128 (2%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           L  + +I  +   +  +   ++     N+            +  T    + +   G    
Sbjct: 136 LDPAINIPANATGITISEAGVVQYTQPNSTAPTTA---GTIQLTTFINPQGLQSIGQNLY 192

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
            +          + +     +  SG ++  NVNV  E  +M    R +  N + IK + +
Sbjct: 193 LQTQASGDPQDGDPNTDGRGSVRSGFLEDSNVNVTEELVNMITAQRSFEMNSRAIKTADE 252

Query: 124 MMTTTLDL 131
           M+     L
Sbjct: 253 MLQRIAQL 260



 Score = 38.7 bits (88), Expect = 0.27,   Method: Composition-based stats.
 Identities = 16/88 (18%), Positives = 34/88 (38%), Gaps = 3/88 (3%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY---RRKTISFEEVMHGSGG 60
          ++ + +IA +G+     ++ ++S N+AN+ T G   G   +     +T+        +G 
Sbjct: 1  MMRALYIAKTGMDSSQFQLDVVSNNLANSNTKGFKKGHAVFEDLYYQTLRQPGSQLTNGN 60

Query: 61 VRVKKIGVDQSTFVEEFDPGHPVANASG 88
               + V   + V      H   N   
Sbjct: 61 SLPTGLQVGTGSTVVATARIHSQGNLES 88


>gi|302037628|ref|YP_003797950.1| flagellar basal-body rod protein FlgG [Candidatus Nitrospira
           defluvii]
 gi|300605692|emb|CBK42025.1| Flagellar basal-body rod protein FlgG [Candidatus Nitrospira
           defluvii]
          Length = 263

 Score = 61.0 bits (146), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 23/132 (17%), Positives = 44/132 (33%), Gaps = 2/132 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
           D L     I +  L +   +   +S  +     T  +        +  +   ++   G +
Sbjct: 134 DQLNPVITIPSGALKIDVGQDGTVSVLL--PGVTQASQVGQIQLVRFDNPSGLVAMGGNL 191

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
            +       +                G ++  NVN+  E  +M    R Y  N +TI+ S
Sbjct: 192 FLDSFASGPAQQGTGGFSTGFGTLQQGFLESSNVNLAEEMVNMIIAQRSYEINSKTIQAS 251

Query: 122 HDMMTTTLDLLR 133
            +MM    +L R
Sbjct: 252 DEMMQIANNLRR 263



 Score = 42.6 bits (98), Expect = 0.020,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 17/41 (41%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I +   A +G+  Q   +  I+ N+AN  T         +
Sbjct: 1  MIRAMWTAATGMTAQQLNVDTIANNLANVNTNAFKRSRAEF 41


>gi|218249434|ref|YP_002375273.1| flagellar basal-body rod protein FlgG [Borrelia burgdorferi ZS7]
 gi|218164622|gb|ACK74683.1| flagellar basal-body rod protein FlgG [Borrelia burgdorferi ZS7]
          Length = 265

 Score = 61.0 bits (146), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 16/86 (18%), Positives = 27/86 (31%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                  +   G    K+                      GI++  NV++  E   M   
Sbjct: 179 RFINPAGLSAIGSNLFKETAGSGQEIAGIPGSEGMGRLRQGILEMSNVSIAEEMVTMIVA 238

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y  N + I+ S +M+    +L R
Sbjct: 239 QRAYEINSKAIQTSDNMLGIANNLKR 264



 Score = 42.2 bits (97), Expect = 0.026,   Method: Composition-based stats.
 Identities = 10/33 (30%), Positives = 18/33 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ +   A SG+  Q   +  I+ N++N  TTG
Sbjct: 1  MMRALWTAASGMTAQQYNVDTIANNLSNVNTTG 33


>gi|147678402|ref|YP_001212617.1| flagellar hook protein FlgE [Pelotomaculum thermopropionicum SI]
 gi|146274499|dbj|BAF60248.1| flagellar hook protein FlgE [Pelotomaculum thermopropionicum SI]
          Length = 264

 Score = 61.0 bits (146), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 25/59 (42%)

Query: 72  TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
                  P    +   G ++ PNVNV+ E   +    R Y AN + I+   +++   ++
Sbjct: 200 DPQGTGRPAVSSSVCQGYLEAPNVNVVDEMVSLITATRAYEANQRIIQSQDELLAKAVN 258



 Score = 36.0 bits (81), Expect = 1.7,   Method: Composition-based stats.
 Identities = 13/38 (34%), Positives = 21/38 (55%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGS 41
          +I   + A +G+ V  AR++ +S N+ANA T G     
Sbjct: 1  MIRGLYSAAAGMDVLQARVESVSNNLANASTPGYKRED 38


>gi|307699899|ref|ZP_07636950.1| putative flagellar hook protein FlgE [Mobiluncus mulieris FB024-16]
 gi|307614937|gb|EFN94155.1| putative flagellar hook protein FlgE [Mobiluncus mulieris FB024-16]
          Length = 512

 Score = 61.0 bits (146), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 20/120 (16%), Positives = 41/120 (34%), Gaps = 8/120 (6%)

Query: 14  GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTF 73
           G+          S  ++ A     T           S    +  +G     + G      
Sbjct: 401 GVEADGTIRGTFSNGMSRAMGKIATAA--------FSNPLGLEKAGASYFVESGNSGQPQ 452

Query: 74  VEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           + E   G   A   G ++  NV++  E  ++  + R + AN + I  S +++   + + R
Sbjct: 453 IGEPGSGSRGAMTGGAIEMSNVDLAAEFTNLILSQRGFQANTRVITTSDEILQELVSMKR 512



 Score = 38.3 bits (87), Expect = 0.31,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 29/69 (42%), Gaps = 5/69 (7%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY-----RRKTISFEEVMHGS 58
          ++ S     SGL+V    + + S NIAN  TTG    S  +     +         ++  
Sbjct: 1  MLRSLFTGISGLSVHQTMLDVTSNNIANVNTTGFKSASTRFEDTFSQLVKSGATARLNER 60

Query: 59 GGVRVKKIG 67
          GG+   ++G
Sbjct: 61 GGMNPAQVG 69


>gi|303249022|ref|ZP_07335267.1| fagellar hook-basal body protein [Desulfovibrio fructosovorans JJ]
 gi|302489608|gb|EFL49548.1| fagellar hook-basal body protein [Desulfovibrio fructosovorans JJ]
          Length = 519

 Score = 61.0 bits (146), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 9/44 (20%), Positives = 23/44 (52%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  NV++  E  ++    R + +N + +  + +MM   L++ R
Sbjct: 476 LESSNVDMATEMVNLITLQRAFQSNSKVVTTADEMMQKALEIKR 519


>gi|111115606|ref|YP_710224.1| flagellar basal body rod protein FlgG [Borrelia afzelii PKo]
 gi|110890880|gb|ABH02048.1| flagellar basal-body rod protein [Borrelia afzelii PKo]
          Length = 265

 Score = 61.0 bits (146), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 35/111 (31%), Gaps = 3/111 (2%)

Query: 23  QIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHP 82
            I+S  I N+    +    +            +   G    K+                 
Sbjct: 157 GIVSVKIDNSNEPIELGQIE---ISRFVNPAGLSAIGSNLFKETAGSGQEIAGIPGSKGM 213

Query: 83  VANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
                GI++  NV++  E   M    R Y  N + I+ S +M+    +L R
Sbjct: 214 GKLRQGILEMSNVSIAEEMVTMIVAQRAYEINSKAIQTSDNMLGIANNLKR 264



 Score = 41.8 bits (96), Expect = 0.029,   Method: Composition-based stats.
 Identities = 10/33 (30%), Positives = 18/33 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ +   A SG+  Q   +  I+ N++N  TTG
Sbjct: 1  MMRALWTAASGMTAQQYNVDTIANNLSNVNTTG 33


>gi|319944135|ref|ZP_08018413.1| flagellar hook protein FlgE [Lautropia mirabilis ATCC 51599]
 gi|319742629|gb|EFV95038.1| flagellar hook protein FlgE [Lautropia mirabilis ATCC 51599]
          Length = 417

 Score = 61.0 bits (146), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 21/98 (21%), Positives = 39/98 (39%)

Query: 34  TTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
           T G T           +  + +   GG +  +     +  V     G      SG ++  
Sbjct: 319 TNGQTVSKGRVALANFTNPQGLQPLGGNQWGETADSGAPLVGSPSTGTLGVIQSGALESS 378

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           NV++  E  +M    R+Y AN QT++    ++ T ++L
Sbjct: 379 NVDLTQELVNMITAQRVYQANAQTVRTHDQLLQTIVNL 416


>gi|239826621|ref|YP_002949245.1| flagellar basal body rod protein FlgG [Geobacillus sp. WCH70]
 gi|239806914|gb|ACS23979.1| protein of unknown function DUF1078 domain protein [Geobacillus sp.
           WCH70]
          Length = 264

 Score = 61.0 bits (146), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 16/126 (12%), Positives = 43/126 (34%), Gaps = 5/126 (3%)

Query: 8   AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
            +I +S  +        +     N    G    +   +    +  + +  +G    ++  
Sbjct: 144 INIPSSAESFSIGSDGTV-----NYIENGSLKSAGQIQLAKFNNNDGLEKAGDNLFRQTA 198

Query: 68  VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
              +               +G ++  NV++  E  +M    R + AN + I  S +++  
Sbjct: 199 NSGTATTGAPGANGTGTIVAGTLEMSNVDLAEEFTEMIVAQRGFQANTRIITTSDEILQE 258

Query: 128 TLDLLR 133
            ++L +
Sbjct: 259 LVNLKK 264



 Score = 33.7 bits (75), Expect = 7.7,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 18/42 (42%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S +     +     ++ +I  NIAN  T G   G   ++
Sbjct: 1  MLRSMYSGIGAMRNFQTKLDVIGNNIANVNTYGFKKGRTIFK 42


>gi|158320521|ref|YP_001513028.1| hypothetical protein Clos_1488 [Alkaliphilus oremlandii OhILAs]
 gi|158140720|gb|ABW19032.1| protein of unknown function DUF1078 domain protein [Alkaliphilus
           oremlandii OhILAs]
          Length = 448

 Score = 61.0 bits (146), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 33/85 (38%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +  +GG   ++              G   A   G ++  NV++  E  DM  T 
Sbjct: 364 FKNPAGLLKTGGNMYRETSNSGEVMFGYAGTGGFGALNPGAIEMSNVDISREFTDMITTQ 423

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R + AN + I  S +M+   +++ R
Sbjct: 424 RGFQANSRIITTSDEMLQEIVNMKR 448



 Score = 39.9 bits (91), Expect = 0.12,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 19/42 (45%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S + A S L     +M +I  NIAN  T G       ++
Sbjct: 1  MMRSMYSAVSSLKAHQLKMDVIGNNIANVNTVGFKGTRVTFQ 42


>gi|85058013|ref|YP_453715.1| flagellar basal body rod protein FlgG [Sodalis glossinidius str.
           'morsitans']
 gi|84778533|dbj|BAE73310.1| flagellar basal-body rod protein FlgG [Sodalis glossinidius str.
           'morsitans']
          Length = 260

 Score = 61.0 bits (146), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 16/84 (19%), Positives = 26/84 (30%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
           T   +  +   G     +     +    +       A     ++  NVNV  E   M + 
Sbjct: 177 TFINDAGLQSLGENLYYETPSSGAPMENKPGMNGAGALKQQFLENSNVNVAQELITMIQA 236

Query: 108 NRLYMANLQTIKQSHDMMTTTLDL 131
            R Y  N + I  S  M+     L
Sbjct: 237 QRAYELNSKAISTSDQMLQRLAQL 260



 Score = 42.9 bits (99), Expect = 0.016,   Method: Composition-based stats.
 Identities = 15/41 (36%), Positives = 20/41 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          ++ S  IA +GL  Q   M +IS NIAN  T G       +
Sbjct: 1  MMRSLMIAKTGLEAQQTNMDVISNNIANVSTMGFKRQQAVF 41


>gi|203284668|ref|YP_002222408.1| flagellar basal-body rod protein [Borrelia duttonii Ly]
 gi|201084111|gb|ACH93702.1| flagellar basal-body rod protein [Borrelia duttonii Ly]
          Length = 265

 Score = 61.0 bits (146), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 14/86 (16%), Positives = 26/86 (30%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                  ++  G    K+                      G+++  NV +  E   M   
Sbjct: 179 RFVNPAGLNAIGNNIFKETIGSGEEISGIPGSNGMGKLKQGMLEMSNVAIAEEMVTMIVA 238

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y  N + I  S +M+    +L +
Sbjct: 239 QRAYEINSKAIHTSDNMLGIANNLKK 264



 Score = 42.2 bits (97), Expect = 0.024,   Method: Composition-based stats.
 Identities = 14/98 (14%), Positives = 30/98 (30%), Gaps = 1/98 (1%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG-VR 62
           ++ +   + SG+  Q   +  I+ N++N  T G       +       +           
Sbjct: 1   MMRALWTSASGMKAQQYNVDTIANNLSNVNTIGFKKIRAEFEDLIYQTQRRAGTPATENT 60

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVE 100
           V  +G       +           +  V   N +V +E
Sbjct: 61  VTPLGNQVGHGTKVSATHRLFEQGNLQVTNLNTDVAIE 98


>gi|15595119|ref|NP_212908.1| flagellar basal body rod protein FlgG [Borrelia burgdorferi B31]
 gi|195941595|ref|ZP_03086977.1| flagellar basal body rod protein FlgG [Borrelia burgdorferi 80a]
 gi|216264940|ref|ZP_03436932.1| flagellar basal-body rod protein FlgG [Borrelia burgdorferi 156a]
 gi|221217835|ref|ZP_03589302.1| flagellar basal-body rod protein FlgG [Borrelia burgdorferi 72a]
 gi|223889350|ref|ZP_03623936.1| flagellar basal-body rod protein FlgG [Borrelia burgdorferi 64b]
 gi|224532949|ref|ZP_03673558.1| flagellar basal-body rod protein FlgG [Borrelia burgdorferi
           WI91-23]
 gi|224533277|ref|ZP_03673871.1| flagellar basal-body rod protein FlgG [Borrelia burgdorferi
           CA-11.2a]
 gi|225548956|ref|ZP_03769933.1| flagellar basal-body rod protein FlgG [Borrelia burgdorferi 94a]
 gi|225549893|ref|ZP_03770854.1| flagellar basal-body rod protein FlgG [Borrelia burgdorferi 118a]
 gi|226320636|ref|ZP_03796195.1| flagellar basal-body rod protein FlgG [Borrelia burgdorferi 29805]
 gi|226321474|ref|ZP_03797001.1| flagellar basal-body rod protein FlgG [Borrelia burgdorferi Bol26]
 gi|3913655|sp|O51715|FLGG_BORBU RecName: Full=Flagellar basal-body rod protein flgG; AltName:
           Full=Distal rod protein
 gi|2688724|gb|AAC67132.1| flagellar basal-body rod protein (flgG) [Borrelia burgdorferi B31]
 gi|215981413|gb|EEC22220.1| flagellar basal-body rod protein FlgG [Borrelia burgdorferi 156a]
 gi|221192141|gb|EEE18361.1| flagellar basal-body rod protein FlgG [Borrelia burgdorferi 72a]
 gi|223885036|gb|EEF56140.1| flagellar basal-body rod protein FlgG [Borrelia burgdorferi 64b]
 gi|224512113|gb|EEF82505.1| flagellar basal-body rod protein FlgG [Borrelia burgdorferi
           WI91-23]
 gi|224513442|gb|EEF83799.1| flagellar basal-body rod protein FlgG [Borrelia burgdorferi
           CA-11.2a]
 gi|225369352|gb|EEG98804.1| flagellar basal-body rod protein FlgG [Borrelia burgdorferi 118a]
 gi|225370559|gb|EEG99995.1| flagellar basal-body rod protein FlgG [Borrelia burgdorferi 94a]
 gi|226233270|gb|EEH32022.1| flagellar basal-body rod protein FlgG [Borrelia burgdorferi Bol26]
 gi|226233959|gb|EEH32681.1| flagellar basal-body rod protein FlgG [Borrelia burgdorferi 29805]
 gi|312149206|gb|ADQ29277.1| flagellar basal-body rod protein FlgG [Borrelia burgdorferi N40]
          Length = 265

 Score = 61.0 bits (146), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 16/86 (18%), Positives = 27/86 (31%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                  +   G    K+                      GI++  NV++  E   M   
Sbjct: 179 RFINPAGLSAIGSNLFKETAGSGQEIAGIPGSEGMGRLRQGILEMSNVSIAEEMVTMIVA 238

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y  N + I+ S +M+    +L R
Sbjct: 239 QRAYEINSKAIQTSDNMLGIANNLKR 264



 Score = 42.2 bits (97), Expect = 0.028,   Method: Composition-based stats.
 Identities = 10/33 (30%), Positives = 18/33 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ +   A SG+  Q   +  I+ N++N  TTG
Sbjct: 1  MMRALWTAASGMTAQQYNVDTIANNLSNVNTTG 33


>gi|260762610|ref|ZP_05874944.1| flagellar basal-body rod protein FlgG [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260673033|gb|EEX59854.1| flagellar basal-body rod protein FlgG [Brucella abortus bv. 2 str.
           86/8/59]
          Length = 243

 Score = 61.0 bits (146), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 18/126 (14%), Positives = 39/126 (30%), Gaps = 3/126 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
           + +  +  I    + V       +    A  +   +            + E  +   GG 
Sbjct: 115 NPVEPAITIPPDAIEVTITDTGQV---FAKLQDQINQVDLGQLTLANFTNEAGLEPLGGN 171

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
             ++        V         +   G ++  NV+ + E  D+    R Y  N + I+ +
Sbjct: 172 LYRETEASGGPLVGVPGDPGYGSIKQGYLEASNVDPVKEITDLITAQRAYEMNSKVIQAA 231

Query: 122 HDMMTT 127
            +M  T
Sbjct: 232 DEMAAT 237


>gi|332799182|ref|YP_004460681.1| flagellar hook-basal body protein [Tepidanaerobacter sp. Re1]
 gi|332696917|gb|AEE91374.1| flagellar hook-basal body protein [Tepidanaerobacter sp. Re1]
          Length = 411

 Score = 61.0 bits (146), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 29/62 (46%)

Query: 72  TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             + E   G   A A G ++  NV++  E   M  T R + AN + I  S +M+   ++L
Sbjct: 350 PQIGESGTGGRGAIAPGYLEMSNVDLSEEFTQMIITQRGFQANSRIITTSDEMLQELVNL 409

Query: 132 LR 133
            R
Sbjct: 410 KR 411


>gi|125972995|ref|YP_001036905.1| protein of unknown function DUF1078-like protein [Clostridium
           thermocellum ATCC 27405]
 gi|256004792|ref|ZP_05429767.1| protein of unknown function DUF1078 domain protein [Clostridium
           thermocellum DSM 2360]
 gi|281417206|ref|ZP_06248226.1| fagellar hook-basal body protein [Clostridium thermocellum JW20]
 gi|125713220|gb|ABN51712.1| protein of unknown function DUF1078-like protein [Clostridium
           thermocellum ATCC 27405]
 gi|255991242|gb|EEU01349.1| protein of unknown function DUF1078 domain protein [Clostridium
           thermocellum DSM 2360]
 gi|281408608|gb|EFB38866.1| fagellar hook-basal body protein [Clostridium thermocellum JW20]
 gi|316940769|gb|ADU74803.1| flagellar hook-basal body protein [Clostridium thermocellum DSM
           1313]
          Length = 440

 Score = 61.0 bits (146), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 22/133 (16%), Positives = 45/133 (33%), Gaps = 24/133 (18%)

Query: 7   SAHIANSGL------AVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           +  I + G+        Q   + +I+  +A+               K      +   + G
Sbjct: 326 TFSIGSDGMIMGIYSNGQQQPLGLIA--LASFDNPAGLE-------KVGENMYIPTSNSG 376

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
              K +                   + G ++  NV++  E  +M  T R + AN + I  
Sbjct: 377 EFKKGVKAGT---------EGVGTLSPGTLEMSNVDLSKEFTEMIITQRGFQANSRIITT 427

Query: 121 SHDMMTTTLDLLR 133
           S +M+   ++L R
Sbjct: 428 SDEMLQELVNLKR 440



 Score = 40.2 bits (92), Expect = 0.087,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 18/42 (42%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S     SGL     +M +I  N+AN  T G       ++
Sbjct: 1  MMRSMFSGVSGLQAHQTKMDVIGNNVANVNTVGFKSSRVTFQ 42


>gi|37525843|ref|NP_929187.1| flagellar basal-body rod protein FlgG (Distal rod protein)
           [Photorhabdus luminescens subsp. laumondii TTO1]
 gi|36785272|emb|CAE14213.1| Flagellar basal-body rod protein FlgG (Distal rod protein)
           [Photorhabdus luminescens subsp. laumondii TTO1]
          Length = 260

 Score = 61.0 bits (146), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 18/128 (14%), Positives = 37/128 (28%), Gaps = 3/128 (2%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +  +  I ++   +  +   I+S      +          +   T   +  +   G    
Sbjct: 136 IFPTITIPDNATDLTISSDGIVS---VKVQGQSVPQQVGQFTLTTFINDSGLESIGENLY 192

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
            +                        V+  NVN+  E  +M +T R Y  N + +  S  
Sbjct: 193 VETSSSGVPIENTPGINGAGLLQHKYVETSNVNIAEELVNMIQTQRAYEVNSKAVSTSDQ 252

Query: 124 MMTTTLDL 131
           M+     L
Sbjct: 253 MLQKLTQL 260



 Score = 44.5 bits (103), Expect = 0.006,   Method: Composition-based stats.
 Identities = 16/95 (16%), Positives = 30/95 (31%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I S  IA +GL  Q   M +I+ N+AN  T G       +                 + 
Sbjct: 1  MIRSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAIFEDLLYQNIRQPGAMSSEQT 60

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVL 98
          +     Q            + +   + +  N + +
Sbjct: 61 RLPSGLQIGTGVRPVATERIHSQGNLSETNNSHNV 95


>gi|242277989|ref|YP_002990118.1| hypothetical protein Desal_0512 [Desulfovibrio salexigens DSM 2638]
 gi|242120883|gb|ACS78579.1| protein of unknown function DUF1078 domain protein [Desulfovibrio
           salexigens DSM 2638]
          Length = 529

 Score = 61.0 bits (146), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 16/79 (20%), Positives = 28/79 (35%)

Query: 55  MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
           +   GG                   G   + AS  ++  NV+V  E   +  T R + AN
Sbjct: 451 LRREGGNLFSSTRDSGPALTGRAGTGPLGSIASNKLEQSNVDVGDEMVKLITTQRGFQAN 510

Query: 115 LQTIKQSHDMMTTTLDLLR 133
            + I  +  ++   + L R
Sbjct: 511 SKAITTADQLLGELIQLKR 529


>gi|326204617|ref|ZP_08194473.1| fagellar hook-basal body protein [Clostridium papyrosolvens DSM
           2782]
 gi|325985184|gb|EGD46024.1| fagellar hook-basal body protein [Clostridium papyrosolvens DSM
           2782]
          Length = 443

 Score = 61.0 bits (146), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 23/133 (17%), Positives = 46/133 (34%), Gaps = 24/133 (18%)

Query: 7   SAHIANSGL------AVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           + +I + G+        Q   + +I+  +A               +K      +   + G
Sbjct: 329 TFNIGSDGMITGVYSNGQQQPLGLIA--LAGFDNPAG-------LQKVGGNLFMPTTNSG 379

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
              K +                   + G ++  NV++  E  DM  T R + AN + I  
Sbjct: 380 DFNKGVPAGS---------QGVGTLSPGTLEMSNVDLSREFTDMIVTQRGFQANSRIITT 430

Query: 121 SHDMMTTTLDLLR 133
           S +M+   ++L R
Sbjct: 431 SDEMLQELVNLKR 443



 Score = 40.6 bits (93), Expect = 0.065,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 20/42 (47%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S     SGL    A+M +I  N+AN  T G   G   ++
Sbjct: 1  MMRSMFSGVSGLKAHQAKMDVIGNNVANVNTLGFKAGRVTFQ 42


>gi|83721615|ref|YP_440803.1| flagellar basal body rod protein FlgG [Burkholderia thailandensis
           E264]
 gi|167579490|ref|ZP_02372364.1| flagellar basal body rod protein FlgG [Burkholderia thailandensis
           TXDOH]
 gi|167617587|ref|ZP_02386218.1| flagellar basal body rod protein FlgG [Burkholderia thailandensis
           Bt4]
 gi|257140546|ref|ZP_05588808.1| flagellar basal body rod protein FlgG [Burkholderia thailandensis
           E264]
 gi|83655440|gb|ABC39503.1| flagellar basal-body rod protein FlgG [Burkholderia thailandensis
           E264]
          Length = 262

 Score = 61.0 bits (146), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 19/100 (19%), Positives = 34/100 (34%)

Query: 34  TTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
            + +       +  T      +   G     +     +  V +           G V+  
Sbjct: 163 GSNNAVQIGALQIATFINPAGLDARGENLFAETTSSGAPNVSQPGLNGAGTLKQGYVEAS 222

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           NVNV+ E  +M +T R Y  N + +  S  M+ T   + R
Sbjct: 223 NVNVVQELVNMIQTQRAYEINSKAVTTSDQMLQTVTQMSR 262



 Score = 41.0 bits (94), Expect = 0.060,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 22/41 (53%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  S +IA +G+  Q A+M +IS N+AN  T G       +
Sbjct: 1  MNRSLYIAATGMNAQQAQMDVISNNLANVSTNGFKGSRAVF 41


>gi|312111671|ref|YP_003989987.1| fagellar hook-basal body protein [Geobacillus sp. Y4.1MC1]
 gi|311216772|gb|ADP75376.1| fagellar hook-basal body protein [Geobacillus sp. Y4.1MC1]
          Length = 268

 Score = 61.0 bits (146), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 20/126 (15%), Positives = 41/126 (32%), Gaps = 4/126 (3%)

Query: 8   AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
             I  +  +V       +S         G    +   R    S  E +   G    +   
Sbjct: 147 IRIPVTAQSVSIGTDGTVSY----VDANGQLQTAGKIRLAKFSNNEGLEKVGDNLFRPTA 202

Query: 68  VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
                 + +          SG ++  NV++  E  +M    R + AN + I  S +++  
Sbjct: 203 NSGDPQIGDVGDNGTGTIVSGALEMSNVDLAEEFTEMIVAQRGFQANTRIITTSDEILQE 262

Query: 128 TLDLLR 133
            ++L +
Sbjct: 263 LVNLKK 268



 Score = 36.4 bits (82), Expect = 1.2,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 19/42 (45%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S +   S +     ++ +I  NIAN  T G   G   ++
Sbjct: 1  MLRSMYSGISAMKNFQVKLDVIGNNIANVNTYGFKKGRTIFK 42


>gi|332704823|ref|ZP_08424911.1| flagellar basal-body rod protein FlgG [Desulfovibrio africanus str.
           Walvis Bay]
 gi|332554972|gb|EGJ52016.1| flagellar basal-body rod protein FlgG [Desulfovibrio africanus str.
           Walvis Bay]
          Length = 260

 Score = 60.7 bits (145), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 18/105 (17%), Positives = 35/105 (33%)

Query: 29  IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASG 88
           +A     G+   S   +  T      ++  G     +               +    A G
Sbjct: 156 LAALDRQGNELSSTDLQLYTFQNNAGLNAIGRNLFIETEASGPATAGTPGEENVGTLAQG 215

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NV ++ E   M    R +  N + I  S  M+ T +++ R
Sbjct: 216 FLEGSNVELVDEMVGMIIGQRAFEVNSKAISTSDTMLQTAINVKR 260



 Score = 46.8 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/91 (15%), Positives = 23/91 (25%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ S   A +G+  Q   +  IS N+AN  T G       +        ++         
Sbjct: 1  MMRSLWTAATGMVAQQMNIDTISNNLANVNTIGFKKSRAEFEDLMYQTMKIAGTRTEGGN 60

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIVKYPN 94
                Q          H            N
Sbjct: 61 VTPVGIQMGMGVRPMTVHKFFTQGDFQNTSN 91


>gi|323703191|ref|ZP_08114844.1| fagellar hook-basal body protein [Desulfotomaculum nigrificans DSM
           574]
 gi|323531850|gb|EGB21736.1| fagellar hook-basal body protein [Desulfotomaculum nigrificans DSM
           574]
          Length = 260

 Score = 60.7 bits (145), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 19/100 (19%), Positives = 30/100 (30%)

Query: 34  TTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
             GD    D     T      +   G                            G ++  
Sbjct: 161 AEGDFQDIDEITLYTFPAPANLLDEGNNLYSPTTASGEATEGTPGEDGVGLIRQGYLERS 220

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           NV++  E   M E  R Y AN +TI+ + +M     +L +
Sbjct: 221 NVDLAQEMLGMIEAQRAYAANARTIQTADEMWDRANNLRK 260



 Score = 41.8 bits (96), Expect = 0.034,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 26/69 (37%), Gaps = 7/69 (10%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I +     SG+     ++  I  NIAN  T         Y+R  I F E+M  + G + 
Sbjct: 2  IIKTLATGASGMRAFQMKLDTIGNNIANINT-------TAYKRSRIEFAEMMRQAMGDQG 54

Query: 64 KKIGVDQST 72
               D   
Sbjct: 55 IPAASDPRP 63


>gi|149194278|ref|ZP_01871375.1| flagellar basal-body rod protein distal rod protein [Caminibacter
           mediatlanticus TB-2]
 gi|149135453|gb|EDM23932.1| flagellar basal-body rod protein distal rod protein [Caminibacter
           mediatlanticus TB-2]
          Length = 262

 Score = 60.7 bits (145), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 17/86 (19%), Positives = 28/86 (32%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                  +H  G              V+            G ++  NV ++ E  D+   
Sbjct: 177 KFINPAGLHSLGSNLYINTSASGDPIVDVPGQTGLGEIRQGFIEMSNVQLVEEMTDLITG 236

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y A  + I  S +M+ T  +L R
Sbjct: 237 QRAYDAASKAIMTSDEMLQTVNNLKR 262



 Score = 40.2 bits (92), Expect = 0.082,   Method: Composition-based stats.
 Identities = 12/62 (19%), Positives = 24/62 (38%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ S + A +G+  Q  ++ ++S NI+N  T G       +        E    +     
Sbjct: 1  MVRSLYTAATGMMAQQTQIDVVSNNISNVNTIGYKKQRAEFADLFYQTMEYAGTATSTTT 60

Query: 64 KK 65
          K 
Sbjct: 61 KS 62


>gi|253990125|ref|YP_003041481.1| flagellar basal-body rod protein flgg [Photorhabdus asymbiotica
           subsp. asymbiotica ATCC 43949]
 gi|253781575|emb|CAQ84738.1| flagellar basal-body rod protein flgg (distal rod protein)
           [Photorhabdus asymbiotica]
          Length = 260

 Score = 60.7 bits (145), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 17/127 (13%), Positives = 36/127 (28%), Gaps = 3/127 (2%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
             +  I ++   +  +   ++S      +          +   T   E  +   G     
Sbjct: 137 FPTITIPDNATDIAISSDGVVS---VKVQGQSAPQQVGQFTLTTFINENGLESIGENLYV 193

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           +                        ++  NVN+  E  +M +T R Y  N + +  S  M
Sbjct: 194 ETSSSGVPIENTPGINGAGLLQHKYLETSNVNIAEELVNMIQTQRAYEVNSKAVSTSDQM 253

Query: 125 MTTTLDL 131
           +     L
Sbjct: 254 LQKLTQL 260



 Score = 44.9 bits (104), Expect = 0.004,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 20/41 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I S  IA +GL  Q   M +I+ N+AN  T G       +
Sbjct: 1  MIRSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVF 41


>gi|328948267|ref|YP_004365604.1| flagellar basal-body rod protein FlgG [Treponema succinifaciens DSM
           2489]
 gi|328448591|gb|AEB14307.1| flagellar basal-body rod protein FlgG [Treponema succinifaciens DSM
           2489]
          Length = 264

 Score = 60.7 bits (145), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 22/45 (48%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NV+V+ E   M    R Y  N + I+ S +M+ T   L R
Sbjct: 220 FLEMSNVSVVNEMVQMIVAQRAYEFNSKAIQTSDNMLQTAAGLKR 264



 Score = 38.3 bits (87), Expect = 0.38,   Method: Composition-based stats.
 Identities = 12/67 (17%), Positives = 22/67 (32%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ S   A +G+  Q   +  IS N++N  TTG       +        ++         
Sbjct: 1  MVRSLWNAATGMNGQQMNIDTISNNLSNVNTTGFKQHRAEFEDLLYQNVKLAGTPATEDT 60

Query: 64 KKIGVDQ 70
                Q
Sbjct: 61 VTPVGHQ 67


>gi|167909129|ref|ZP_02496220.1| flagellar basal body rod protein FlgG [Burkholderia pseudomallei
           112]
          Length = 262

 Score = 60.7 bits (145), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 19/100 (19%), Positives = 34/100 (34%)

Query: 34  TTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
            + +       +  T      +   G     +     +  V +           G V+  
Sbjct: 163 GSNNAVQIGALQIATFINPAGLDAKGENLFAETTSSGAPNVSQPGLNGAGTLKQGYVESS 222

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           NVNV+ E  +M +T R Y  N + +  S  M+ T   + R
Sbjct: 223 NVNVVQELVNMIQTQRAYEINSKAVTTSDQMLQTVTQMSR 262



 Score = 41.0 bits (94), Expect = 0.053,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 22/41 (53%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  S +IA +G+  Q A+M +IS N+AN  T G       +
Sbjct: 1  MNRSLYIAATGMNAQQAQMDVISNNLANVSTNGFKGSRAVF 41


>gi|77457729|ref|YP_347234.1| flagellar basal body rod protein FlgG [Pseudomonas fluorescens
           Pf0-1]
 gi|77381732|gb|ABA73245.1| flagellar basal-body rod protein [Pseudomonas fluorescens Pf0-1]
          Length = 261

 Score = 60.7 bits (145), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 18/124 (14%), Positives = 35/124 (28%), Gaps = 3/124 (2%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            L  +  I N+       R   +S  +A              +         +   G   
Sbjct: 135 ALEPAIVIPNNAQTFTVGRDGTVSITVA---GNPAAQVIGNLQTADFINPAGLQAVGNNL 191

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
             +     +  V               ++  NV+ + E  +M  T R Y  N + I  + 
Sbjct: 192 FLETAASGAPQVGTPGLNGFGTTLQNTLETSNVSTVEEMVNMITTQRAYEMNSKVISTAD 251

Query: 123 DMMT 126
            M++
Sbjct: 252 QMLS 255



 Score = 41.4 bits (95), Expect = 0.043,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 22/42 (52%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ +  +A +GL+ Q   +  IS N+AN  TTG       ++
Sbjct: 1  MLPALWVAKTGLSAQDTNLTTISNNLANVSTTGFKRDRAEFQ 42


>gi|172057880|ref|YP_001814340.1| hypothetical protein Exig_1871 [Exiguobacterium sibiricum 255-15]
 gi|171990401|gb|ACB61323.1| protein of unknown function DUF1078 domain protein [Exiguobacterium
           sibiricum 255-15]
          Length = 278

 Score = 60.7 bits (145), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 17/129 (13%), Positives = 38/129 (29%), Gaps = 4/129 (3%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
             + +I  +   +   +  +++         G    +             +  SG     
Sbjct: 154 YKTINIPANAQNLSIGKDGLVTY----VDPAGTLQQAGYISLANFPNPGGLEKSGSNMYS 209

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
                                 SG ++  NV++  E  +M    R + AN + I  S  +
Sbjct: 210 ISQNSGQPTSATPSTNGLGQLTSGTLEMSNVDLSEEFTEMIIAQRGFQANTRIITTSDQI 269

Query: 125 MTTTLDLLR 133
           +   ++L R
Sbjct: 270 LEELVNLKR 278



 Score = 36.0 bits (81), Expect = 1.6,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 20/42 (47%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S +   SGL     ++ ++  NIAN  T G   G   ++
Sbjct: 1  MLRSMYSGISGLKNFQTKLDVVGNNIANVNTFGYKKGRVTFK 42


>gi|312148533|gb|ADQ31192.1| flagellar basal-body rod protein FlgG [Borrelia burgdorferi JD1]
          Length = 265

 Score = 60.7 bits (145), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 16/86 (18%), Positives = 27/86 (31%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                  +   G    K+                      GI++  NV++  E   M   
Sbjct: 179 RFINPAGLSAIGSNLFKETAGSGQEIAGIPGSEGMGRLRQGILEMSNVSIAEEMVTMIVA 238

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y  N + I+ S +M+    +L R
Sbjct: 239 QRAYEINSKAIQTSDNMLGIANNLKR 264



 Score = 41.8 bits (96), Expect = 0.029,   Method: Composition-based stats.
 Identities = 10/33 (30%), Positives = 18/33 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ +   A SG+  Q   +  I+ N++N  TTG
Sbjct: 1  MMRALWTAASGMTAQQYNVDTIANNLSNVNTTG 33


>gi|300716220|ref|YP_003741023.1| flagellar basal-body rod protein [Erwinia billingiae Eb661]
 gi|299062056|emb|CAX59172.1| Flagellar basal-body rod protein [Erwinia billingiae Eb661]
          Length = 260

 Score = 60.7 bits (145), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 21/129 (16%), Positives = 39/129 (30%), Gaps = 3/129 (2%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            +  +  +  + L++   R  ++S      +              T   +  +   G   
Sbjct: 135 PVQPAITVPANALSMTIGRDGVVS---VTQQGQTQPVQVGQLTLSTFINDAGLESKGENL 191

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
            ++     +                G V+  NVNV  E   M +T R Y  N + I  S 
Sbjct: 192 YQETQASGAPTDSTPGNNGAGLLYQGYVETSNVNVAEELVSMIQTQRAYEINSKAISTSD 251

Query: 123 DMMTTTLDL 131
            M+     L
Sbjct: 252 QMLAKLTQL 260



 Score = 42.9 bits (99), Expect = 0.013,   Method: Composition-based stats.
 Identities = 15/41 (36%), Positives = 20/41 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I S  IA +GL  Q   M +IS N+AN  T G       +
Sbjct: 1  MIRSLWIAKTGLDAQQTNMDVISNNLANVSTNGFKRQRAVF 41


>gi|94495409|ref|ZP_01301989.1| flagellar basal-body rod protein [Sphingomonas sp. SKA58]
 gi|94424797|gb|EAT09818.1| flagellar basal-body rod protein [Sphingomonas sp. SKA58]
          Length = 262

 Score = 60.7 bits (145), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 42/124 (33%), Gaps = 3/124 (2%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            LI    +     +V       +S   A  +   +          +      +   GG  
Sbjct: 136 PLIPQITVPQGATSVSIGNDGTVS---ATLQGESEPSQLGQIELASFMNPSGLQSIGGNL 192

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
           + +     +  V            SG ++  NVN++ E  DM ET R Y  N + IK + 
Sbjct: 193 LVETAASGTPQVGVAGLEGRGVIRSGYLETSNVNIVEELVDMIETQRAYEVNSKMIKATD 252

Query: 123 DMMT 126
           +M+ 
Sbjct: 253 EMLQ 256



 Score = 39.5 bits (90), Expect = 0.18,   Method: Composition-based stats.
 Identities = 14/39 (35%), Positives = 24/39 (61%)

Query: 6  ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          A+ H+A +GL  Q+ +M++I+ N+AN  TTG       +
Sbjct: 4  AALHVARTGLDAQNTKMRVIANNLANVNTTGFKKDRADF 42


>gi|121533754|ref|ZP_01665581.1| protein of unknown function DUF1078 domain protein [Thermosinus
           carboxydivorans Nor1]
 gi|121307745|gb|EAX48660.1| protein of unknown function DUF1078 domain protein [Thermosinus
           carboxydivorans Nor1]
          Length = 420

 Score = 60.7 bits (145), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 18/100 (18%), Positives = 35/100 (35%)

Query: 34  TTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
           + G T         T +    +   G           +  +     G       G ++  
Sbjct: 321 SNGKTRNLAQVALATFNNPAGLTKIGDSLYAVSSNSGTPEIGVTGSGGRGKLNPGTLEMS 380

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           NV++  E ++M  T R + AN + I  + +M+    +L R
Sbjct: 381 NVDLAQEFSNMIITQRGFQANSKIISVTDEMLQELANLKR 420



 Score = 39.9 bits (91), Expect = 0.12,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 21/59 (35%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
          ++ S     SGL     RM +I  NIAN  T G       ++       +      G +
Sbjct: 1  MMRSLFAGVSGLRNHQTRMDVIGNNIANVNTIGFKASRVNFQDILSQTMQGASSGIGNQ 59


>gi|284041521|ref|YP_003391861.1| fagellar hook-basal body protein [Conexibacter woesei DSM 14684]
 gi|283945742|gb|ADB48486.1| fagellar hook-basal body protein [Conexibacter woesei DSM 14684]
          Length = 293

 Score = 60.7 bits (145), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 17/92 (18%), Positives = 36/92 (39%)

Query: 42  DPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVET 101
                   + E  +  +GG    +     +  V+    G      +G+++  NV++  + 
Sbjct: 202 GYIALGKFANEAGLQRNGGSTWSESAASGAATVDTPGVGGNGRTLAGMLEMSNVDLATQF 261

Query: 102 ADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             M    R + AN + I  S +M+   ++L R
Sbjct: 262 TTMITAQRGFQANSRVISTSDEMLQDLVNLKR 293


>gi|163856437|ref|YP_001630735.1| flagellar basal body rod protein FlgG [Bordetella petrii DSM 12804]
 gi|163260165|emb|CAP42467.1| flagellar basal-body rod protein FlgG [Bordetella petrii]
          Length = 261

 Score = 60.7 bits (145), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 20/124 (16%), Positives = 41/124 (33%), Gaps = 2/124 (1%)

Query: 8   AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
            ++ ++ L++   +   +S  +      G        +  T      +   G     +  
Sbjct: 140 INVPDNALSLTIGKDGTVS--VTQPGAAGLNVQIGQLQLATFINPPGLQSVGENLYLETD 197

Query: 68  VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
                 + +       +     V+  NVNV  E  +M  T R Y  N + +K S +M+  
Sbjct: 198 SSGPANILQPGIDGAGSILQQYVETSNVNVAEELVNMITTQRAYEMNSKAVKTSDEMLAR 257

Query: 128 TLDL 131
              L
Sbjct: 258 LTQL 261



 Score = 43.3 bits (100), Expect = 0.012,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 25/61 (40%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ S  IA +GL  Q   M +IS N+AN +T G   G   ++              G   
Sbjct: 1  MMRSLWIAKTGLEGQQTSMDVISNNLANVQTNGFKRGRAIFQDLMYQTLRQPGAQVGDAN 60

Query: 64 K 64
          +
Sbjct: 61 Q 61


>gi|226944494|ref|YP_002799567.1| flagellar basal-body rod protein [Azotobacter vinelandii DJ]
 gi|226719421|gb|ACO78592.1| flagellar basal-body rod protein [Azotobacter vinelandii DJ]
          Length = 260

 Score = 60.7 bits (145), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 22/128 (17%), Positives = 39/128 (30%), Gaps = 3/128 (2%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           L+    I  + L+V  ++  I+S                            +   G    
Sbjct: 136 LMGGITIPENALSVTVSQDGIVS---VTQPGNAQANQVGQLNLALFINPAGLQSVGENLY 192

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
            +     +                G V+  NVNV+ E   M +T R Y  N + ++ S +
Sbjct: 193 LETASSGAPNENIPGTNGAGRLYQGYVETSNVNVVEEMVSMIQTQRAYEINSKAVETSDE 252

Query: 124 MMTTTLDL 131
           M+     L
Sbjct: 253 MLARLTQL 260



 Score = 38.7 bits (88), Expect = 0.28,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 20/41 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I S   A +GL  Q  +M +I+ N+AN  T G       +
Sbjct: 1  MIRSLWTAKTGLESQQVQMDVIANNLANVATNGFKRTRAVF 41


>gi|269792937|ref|YP_003317841.1| hypothetical protein Taci_1328 [Thermanaerovibrio acidaminovorans
           DSM 6589]
 gi|269100572|gb|ACZ19559.1| protein of unknown function DUF1078 domain protein
           [Thermanaerovibrio acidaminovorans DSM 6589]
          Length = 636

 Score = 60.7 bits (145), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 12/85 (14%), Positives = 30/85 (35%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +  + +    G    +        + +   G         ++  NV++  E  ++    
Sbjct: 552 FANPQGLFKESGTVFSQSANSGIAQIVKPMEGGAGRIMGSNLEMSNVDLSQEFVNLIVAQ 611

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R + AN + I  S  ++   ++L R
Sbjct: 612 RGFQANARVITTSDQVLEELINLKR 636



 Score = 34.5 bits (77), Expect = 5.5,   Method: Composition-based stats.
 Identities = 15/92 (16%), Positives = 26/92 (28%), Gaps = 1/92 (1%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSD-PYRRKTISFEEVMHGSGGVR 62
          ++ S +   SG+      + ++  NIAN  TTG    +         +    M    G  
Sbjct: 1  MLRSLYSGVSGVKGHQTYLDVVGNNIANVNTTGFKRSNVLFQDLLYQNVRGAMAPDAGQG 60

Query: 63 VKKIGVDQSTFVEEFDPGHPVANASGIVKYPN 94
             I   Q            +     +    N
Sbjct: 61 RGGINPMQVGLGSMVGAVETIHTQGTMQYTGN 92


>gi|160896077|ref|YP_001561659.1| flagellar basal-body rod protein FlgG [Delftia acidovorans SPH-1]
 gi|160361661|gb|ABX33274.1| flagellar basal-body rod protein FlgG [Delftia acidovorans SPH-1]
          Length = 260

 Score = 60.7 bits (145), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 20/130 (15%), Positives = 35/130 (26%), Gaps = 3/130 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             +     I      V  +   ++S  +A                        +   G  
Sbjct: 134 MPIANGVTIPQGATKVSISPEGVVSVTMA---GQAAPQQVGNIAMSQFINPAGLEPRGQN 190

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
              +          +           G ++  NVNV+ E   M +T R Y  N + I+ S
Sbjct: 191 LFTETASSGQPQQGQPGVNGMGMIKQGYLEGSNVNVVQELVTMIQTQRAYEMNSKAIQTS 250

Query: 122 HDMMTTTLDL 131
             M+     L
Sbjct: 251 DQMLAKLAQL 260



 Score = 39.9 bits (91), Expect = 0.13,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 23/41 (56%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I S  I+ +G+  Q  ++ +IS N+AN  TTG    S  +
Sbjct: 1  MINSLFISKTGMEAQQTQLDVISHNLANVSTTGYKRASAVF 41


>gi|206890777|ref|YP_002249848.1| flagellar basal-body rod protein FlgG [Thermodesulfovibrio
           yellowstonii DSM 11347]
 gi|206742715|gb|ACI21772.1| flagellar basal-body rod protein FlgG [Thermodesulfovibrio
           yellowstonii DSM 11347]
          Length = 262

 Score = 60.7 bits (145), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 25/47 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NVN++ E A+M    R +  N + ++ S +M+ T   L R
Sbjct: 216 QGFLEMSNVNIVEELANMIIAQRAFDINSKAVQTSDEMLQTVAALKR 262



 Score = 44.5 bits (103), Expect = 0.005,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 23/42 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S   A++G+  Q   + +IS N+AN  TTG   G   ++
Sbjct: 1  MLRSLFTASTGMYAQQLNLDVISHNLANVNTTGFKKGRAEFQ 42


>gi|323341378|ref|ZP_08081622.1| flagellar basal-body rod protein FlgG [Lactobacillus ruminis ATCC
           25644]
 gi|323091255|gb|EFZ33883.1| flagellar basal-body rod protein FlgG [Lactobacillus ruminis ATCC
           25644]
          Length = 301

 Score = 60.7 bits (145), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 18/86 (20%), Positives = 32/86 (37%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
             +    +  SG                    G      SG ++  NV++  + + M   
Sbjct: 216 KFNNPSGLKKSGSNNFSVTNNSGDPNFATPGLGGTGTLESGFLEMSNVDLADQFSQMIIA 275

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
           +R Y AN ++I  S +M+   L+L R
Sbjct: 276 SRAYQANSRSITTSDEMLQELLNLKR 301



 Score = 34.8 bits (78), Expect = 4.0,   Method: Composition-based stats.
 Identities = 11/56 (19%), Positives = 22/56 (39%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          ++ S +   SG+     +M +I+ N++N  T G   G   ++             G
Sbjct: 1  MLRSLYSGVSGMKGFQTQMDVIANNVSNVNTHGFKAGRVLFQDMVSQNTTSASAPG 56


>gi|53717916|ref|YP_106902.1| flagellar basal body rod protein FlgG [Burkholderia pseudomallei
           K96243]
 gi|53724567|ref|YP_104800.1| flagellar basal body rod protein FlgG [Burkholderia mallei ATCC
           23344]
 gi|67641540|ref|ZP_00440317.1| flagellar basal-body rod protein FlgG [Burkholderia mallei GB8
           horse 4]
 gi|76808723|ref|YP_331881.1| flagellar basal body rod protein FlgG [Burkholderia pseudomallei
           1710b]
 gi|121598854|ref|YP_994293.1| flagellar basal body rod protein FlgG [Burkholderia mallei SAVP1]
 gi|124386502|ref|YP_001028058.1| flagellar basal body rod protein FlgG [Burkholderia mallei NCTC
           10229]
 gi|126439033|ref|YP_001057324.1| flagellar basal body rod protein FlgG [Burkholderia pseudomallei
           668]
 gi|126450732|ref|YP_001082865.1| flagellar basal body rod protein FlgG [Burkholderia mallei NCTC
           10247]
 gi|126454438|ref|YP_001064566.1| flagellar basal body rod protein FlgG [Burkholderia pseudomallei
           1106a]
 gi|134283616|ref|ZP_01770315.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei
           305]
 gi|167001539|ref|ZP_02267334.1| flagellar basal-body rod protein FlgG [Burkholderia mallei PRL-20]
 gi|167717662|ref|ZP_02400898.1| flagellar basal body rod protein FlgG [Burkholderia pseudomallei
           DM98]
 gi|167736705|ref|ZP_02409479.1| flagellar basal body rod protein FlgG [Burkholderia pseudomallei
           14]
 gi|167813804|ref|ZP_02445484.1| flagellar basal body rod protein FlgG [Burkholderia pseudomallei
           91]
 gi|167822320|ref|ZP_02453791.1| flagellar basal body rod protein FlgG [Burkholderia pseudomallei 9]
 gi|167843910|ref|ZP_02469418.1| flagellar basal body rod protein FlgG [Burkholderia pseudomallei
           B7210]
 gi|167892412|ref|ZP_02479814.1| flagellar basal body rod protein FlgG [Burkholderia pseudomallei
           7894]
 gi|167900910|ref|ZP_02488115.1| flagellar basal body rod protein FlgG [Burkholderia pseudomallei
           NCTC 13177]
 gi|167917166|ref|ZP_02504257.1| flagellar basal body rod protein FlgG [Burkholderia pseudomallei
           BCC215]
 gi|217425015|ref|ZP_03456511.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei
           576]
 gi|226199816|ref|ZP_03795367.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei
           Pakistan 9]
 gi|237810463|ref|YP_002894914.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei
           MSHR346]
 gi|242317698|ref|ZP_04816714.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei
           1106b]
 gi|254175110|ref|ZP_04881771.1| flagellar basal-body rod protein FlgG [Burkholderia mallei ATCC
           10399]
 gi|254182138|ref|ZP_04888735.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei
           1655]
 gi|254196575|ref|ZP_04902999.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei
           S13]
 gi|254201898|ref|ZP_04908262.1| flagellar basal-body rod protein FlgG [Burkholderia mallei FMH]
 gi|254207232|ref|ZP_04913583.1| flagellar basal-body rod protein FlgG [Burkholderia mallei JHU]
 gi|254261052|ref|ZP_04952106.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei
           1710a]
 gi|254295816|ref|ZP_04963273.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei
           406e]
 gi|254359734|ref|ZP_04976005.1| flagellar basal-body rod protein FlgG [Burkholderia mallei
           2002721280]
 gi|52208330|emb|CAH34263.1| flagellar basal-body rod protein [Burkholderia pseudomallei K96243]
 gi|52427990|gb|AAU48583.1| flagellar basal-body rod protein FlgG [Burkholderia mallei ATCC
           23344]
 gi|76578176|gb|ABA47651.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei
           1710b]
 gi|121227664|gb|ABM50182.1| flagellar basal-body rod protein FlgG [Burkholderia mallei SAVP1]
 gi|124294522|gb|ABN03791.1| flagellar basal-body rod protein FlgG [Burkholderia mallei NCTC
           10229]
 gi|126218526|gb|ABN82032.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei
           668]
 gi|126228080|gb|ABN91620.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei
           1106a]
 gi|126243602|gb|ABO06695.1| flagellar basal-body rod protein FlgG [Burkholderia mallei NCTC
           10247]
 gi|134245025|gb|EBA45120.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei
           305]
 gi|147747792|gb|EDK54868.1| flagellar basal-body rod protein FlgG [Burkholderia mallei FMH]
 gi|147752774|gb|EDK59840.1| flagellar basal-body rod protein FlgG [Burkholderia mallei JHU]
 gi|148028948|gb|EDK86880.1| flagellar basal-body rod protein FlgG [Burkholderia mallei
           2002721280]
 gi|157806194|gb|EDO83364.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei
           406e]
 gi|160696155|gb|EDP86125.1| flagellar basal-body rod protein FlgG [Burkholderia mallei ATCC
           10399]
 gi|169653318|gb|EDS86011.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei
           S13]
 gi|184212676|gb|EDU09719.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei
           1655]
 gi|217392035|gb|EEC32061.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei
           576]
 gi|225928167|gb|EEH24203.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei
           Pakistan 9]
 gi|237504504|gb|ACQ96822.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei
           MSHR346]
 gi|238522491|gb|EEP85935.1| flagellar basal-body rod protein FlgG [Burkholderia mallei GB8
           horse 4]
 gi|242140937|gb|EES27339.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei
           1106b]
 gi|243062740|gb|EES44926.1| flagellar basal-body rod protein FlgG [Burkholderia mallei PRL-20]
 gi|254219741|gb|EET09125.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei
           1710a]
          Length = 262

 Score = 60.7 bits (145), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 19/100 (19%), Positives = 34/100 (34%)

Query: 34  TTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
            + +       +  T      +   G     +     +  V +           G V+  
Sbjct: 163 GSNNAVQIGALQIATFINPAGLDAKGENLFAETTSSGAPNVSQPGLNGAGTLKQGYVESS 222

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           NVNV+ E  +M +T R Y  N + +  S  M+ T   + R
Sbjct: 223 NVNVVQELVNMIQTQRAYEINSKAVTTSDQMLQTVTQMSR 262



 Score = 41.0 bits (94), Expect = 0.062,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 22/41 (53%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  S +IA +G+  Q A+M +IS N+AN  T G       +
Sbjct: 1  MNRSLYIAATGMNAQQAQMDVISNNLANVSTNGFKGSRAVF 41


>gi|121601827|ref|YP_989383.1| flagellar hook protein FlgE [Bartonella bacilliformis KC583]
 gi|120614004|gb|ABM44605.1| flagellar hook protein FlgE [Bartonella bacilliformis KC583]
          Length = 404

 Score = 60.7 bits (145), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 21/100 (21%), Positives = 38/100 (38%)

Query: 34  TTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
           T   T         T++  E +    G   +      +  V     G   +  +G ++  
Sbjct: 305 TNQKTRVISYVGLATVTSPESLTVLSGTVFQTNTRTGAQMVGRPGDGVFGSLTAGYLEDS 364

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           NV +  E  DM E+ R Y AN +  +   ++M   ++L R
Sbjct: 365 NVEMSEELTDMIESQRNYTANSKVFQTGSELMDVIVNLKR 404



 Score = 49.1 bits (115), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 37/110 (33%), Gaps = 2/110 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG- 60
             +    H + SG+  Q  R+  I+EN+ANA T G    +  +        +  +  GG 
Sbjct: 1   MGIYGMMHTSVSGMNAQGKRLSGIAENVANAGTVGYKRTNVQFSNYVTPSGDYAYVPGGV 60

Query: 61  -VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNR 109
              V               PG  + N +G  +  + N           +R
Sbjct: 61  KSHVGHDISIYGPARATGRPGDAMINGNGFFRVEDENGNEFLTRAGSFSR 110


>gi|254488392|ref|ZP_05101597.1| flagellar basal-body rod protein FlgG [Roseobacter sp. GAI101]
 gi|214045261|gb|EEB85899.1| flagellar basal-body rod protein FlgG [Roseobacter sp. GAI101]
          Length = 261

 Score = 60.7 bits (145), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 18/116 (15%), Positives = 35/116 (30%)

Query: 16  AVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVE 75
             +S  +    E  A             +     S  + +   GG    +     +  V 
Sbjct: 145 DARSISINASGEVFAYFDGNIAAQLLGQFTMSGFSNAKGLEAIGGNLFVETEASGAALVA 204

Query: 76  EFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
                       G ++  +V+ + E  ++ E  R Y  N + I  +  MM  T  +
Sbjct: 205 TPGLNGLGTLRQGYLEDSSVDAVREITELIEAQRGYEMNAKVISAADQMMGATTQI 260



 Score = 44.5 bits (103), Expect = 0.005,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 22/40 (55%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          + +  IA +G++ Q  R++ IS N+AN  TTG       +
Sbjct: 1  MRALKIAATGMSAQQMRVETISNNLANMSTTGYNARRAEF 40


>gi|304438315|ref|ZP_07398256.1| flagellar basal-body rod protein FlgG [Selenomonas sp. oral taxon
           149 str. 67H29BP]
 gi|304368681|gb|EFM22365.1| flagellar basal-body rod protein FlgG [Selenomonas sp. oral taxon
           149 str. 67H29BP]
          Length = 264

 Score = 60.7 bits (145), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 21/102 (20%), Positives = 36/102 (35%), Gaps = 2/102 (1%)

Query: 34  TTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANA--SGIVK 91
             G     +  +     F      +   +   +  D S    E +PG   A     G ++
Sbjct: 163 EAGQNQQQEAGQITLARFVNPAGLTSVGKNLFVVSDASGEAIESNPGEDGAGTLTQGTLE 222

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             NV ++ E  +M  + R Y +N + I  S  M+     L R
Sbjct: 223 MSNVQIVEEMVNMIVSQRAYESNSKAITTSDSMLEIANQLKR 264



 Score = 44.5 bits (103), Expect = 0.005,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 23/57 (40%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          ++ +   A SG+  Q ++M +++ NIAN  T G       ++              G
Sbjct: 1  MMRALWSAASGMKAQQSQMDVVAHNIANVNTYGGKKVRAEFQDLVYQTLREAGARNG 57


>gi|85859175|ref|YP_461377.1| flagellar hook protein [Syntrophus aciditrophicus SB]
 gi|85722266|gb|ABC77209.1| flagellar hook protein [Syntrophus aciditrophicus SB]
          Length = 518

 Score = 60.7 bits (145), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 15/74 (20%), Positives = 30/74 (40%)

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           G    +     +  +     G      S  ++  N +V +E  +M    R Y A+ + I 
Sbjct: 445 GSYFAETNFSGAAIINSPGTGGLGEIMSNSLEQSNTDVSMEFVNMINAQRAYQASARIIT 504

Query: 120 QSHDMMTTTLDLLR 133
            S +M+T  +++ R
Sbjct: 505 TSDEMLTELMNIKR 518



 Score = 41.0 bits (94), Expect = 0.051,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 18/43 (41%)

Query: 3  YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
           +  +  I  +GL     +M II  N+AN+ T G       + 
Sbjct: 11 EMSNALWIGTTGLNASQRQMDIIGNNLANSSTLGYKSADTQFA 53


>gi|154686045|ref|YP_001421206.1| flagellar basal body rod protein FlgG [Bacillus amyloliquefaciens
           FZB42]
 gi|154351896|gb|ABS73975.1| FlgE [Bacillus amyloliquefaciens FZB42]
          Length = 258

 Score = 60.7 bits (145), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 24/46 (52%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  NV++  E  +M    R + +N + I  S +++   ++L R
Sbjct: 213 GYLEMSNVDLTDEFTEMIVAQRGFQSNSKIITTSDEILQELVNLKR 258



 Score = 36.4 bits (82), Expect = 1.3,   Method: Composition-based stats.
 Identities = 15/84 (17%), Positives = 28/84 (33%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ S +   SG+     ++ +I  NIAN  T G       ++                + 
Sbjct: 1  MLRSLYSGISGMKNFQTKLDVIGNNIANVNTVGFKKSRVTFKDMISQTVAGGSNVTNSKQ 60

Query: 64 KKIGVDQSTFVEEFDPGHPVANAS 87
            +G   S+       G P A  +
Sbjct: 61 IGLGAATSSIDVVHSTGAPQATQN 84


>gi|51246533|ref|YP_066417.1| flagellar hook basal body protein (FlgG) [Desulfotalea psychrophila
           LSv54]
 gi|50877570|emb|CAG37410.1| probable flagellar hook basal body protein (FlgG) [Desulfotalea
           psychrophila LSv54]
          Length = 261

 Score = 60.7 bits (145), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 25/129 (19%), Positives = 40/129 (31%), Gaps = 3/129 (2%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            LI    I +    V      I+S  +    +               +    +   G   
Sbjct: 135 PLIPEITIPSGAKQVSIGETGIVSVKL---DSDSTETEIGTIELAGFTNPAGLAAIGKNL 191

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
            ++ G   +  +               ++  NVN++ E A M  T R Y  N   +K S 
Sbjct: 192 FEETGASGTATIGIPGEEGYGTLIQQYLEGSNVNLVAEMAAMISTQRAYEINSSMVKTSD 251

Query: 123 DMMTTTLDL 131
            MM T  DL
Sbjct: 252 QMMQTVNDL 260



 Score = 42.9 bits (99), Expect = 0.016,   Method: Composition-based stats.
 Identities = 13/62 (20%), Positives = 23/62 (37%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +  S     +G+  Q   + II+ N+AN  TTG    S  ++       +V         
Sbjct: 1  MFRSLWTGTTGMQAQQLNIDIIANNLANVNTTGFKKSSADFQDLLYQTMKVPGSQTSPDT 60

Query: 64 KK 65
          + 
Sbjct: 61 ES 62


>gi|291484181|dbj|BAI85256.1| flagellar basal body rod protein FlgG [Bacillus subtilis subsp.
           natto BEST195]
          Length = 264

 Score = 60.3 bits (144), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 26/50 (52%)

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           A  SG ++  NV++  E  +M    R + +N + I  S +++   ++L R
Sbjct: 215 ALKSGFLEMSNVDLTDEFTEMIVAQRGFQSNSKIITTSDEILQELVNLKR 264



 Score = 35.6 bits (80), Expect = 2.3,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 19/42 (45%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S +   SG+     ++ +I  NIAN  T G       ++
Sbjct: 1  MLRSLYSGISGMKNFQTKLDVIGNNIANVNTVGFKKSRVTFK 42


>gi|39912|emb|CAA39528.1| unnamed protein product [Bacillus subtilis subsp. subtilis str.
           168]
          Length = 264

 Score = 60.3 bits (144), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 26/50 (52%)

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           A  SG ++  NV++  E  +M    R + +N + I  S +++   ++L R
Sbjct: 215 ALKSGFLEMSNVDLTDEFTEMIVAQRGFQSNSKIITTSDEILQELVNLKR 264



 Score = 35.6 bits (80), Expect = 2.3,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 19/42 (45%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S +   SG+     ++ +I  NIAN  T G       ++
Sbjct: 1  MLRSLYSGISGMKNFQTKLDVIGNNIANVNTVGFKKSRVTFK 42


>gi|326796595|ref|YP_004314415.1| flagellar basal-body rod protein FlgG [Marinomonas mediterranea
           MMB-1]
 gi|326547359|gb|ADZ92579.1| flagellar basal-body rod protein FlgG [Marinomonas mediterranea
           MMB-1]
          Length = 261

 Score = 60.3 bits (144), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 28/78 (35%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 ++  GG   ++     +  V             G+++  NVN + E  +M  T 
Sbjct: 178 FINPAGLYFLGGNLYEETSASGAPIVGVPGEEGLGELGQGMLEASNVNSVEELVNMITTQ 237

Query: 109 RLYMANLQTIKQSHDMMT 126
           R Y  N + I  +  M+ 
Sbjct: 238 RAYEMNSKVISTADGMLG 255



 Score = 35.6 bits (80), Expect = 2.3,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 38/111 (34%), Gaps = 7/111 (6%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +  +   A +GL     ++ +IS N+AN  TTG       +        + +   GG+  
Sbjct: 1   MQTALWTAKTGLTAMDRQLSVISNNLANVSTTGFKKERAVF---ENLMYQTLKSPGGLSA 57

Query: 64  KKI----GVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRL 110
           +      G+     V               V   N++V ++ A   +  R 
Sbjct: 58  QNTELPSGLQIGAGVRVTGMQKNFEEGDYNVTDRNLDVAIQGAGFFQITRS 108


>gi|221309506|ref|ZP_03591353.1| flagellar basal body rod protein FlgG [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221313830|ref|ZP_03595635.1| flagellar basal body rod protein FlgG [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221318753|ref|ZP_03600047.1| flagellar basal body rod protein FlgG [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221323025|ref|ZP_03604319.1| flagellar basal body rod protein FlgG [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|255767369|ref|NP_389511.2| flagellar basal body rod protein FlgG [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|321315395|ref|YP_004207682.1| flagellar basal body rod protein FlgG [Bacillus subtilis BSn5]
 gi|239938626|sp|P23446|FLGG_BACSU RecName: Full=Flagellar basal-body rod protein flgG; AltName:
           Full=Distal rod protein
 gi|142919|gb|AAA22444.1| flgG [Bacillus subtilis]
 gi|225184996|emb|CAB13502.2| flagellar hook protein [Bacillus subtilis subsp. subtilis str. 168]
 gi|320021669|gb|ADV96655.1| flagellar basal body rod protein FlgG [Bacillus subtilis BSn5]
          Length = 264

 Score = 60.3 bits (144), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 26/50 (52%)

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           A  SG ++  NV++  E  +M    R + +N + I  S +++   ++L R
Sbjct: 215 ALKSGFLEMSNVDLTDEFTEMIVAQRGFQSNSKIITTSDEILQELVNLKR 264



 Score = 35.6 bits (80), Expect = 2.4,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 19/42 (45%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S +   SG+     ++ +I  NIAN  T G       ++
Sbjct: 1  MLRSLYSGISGMKNFQTKLDVIGNNIANVNTVGFKKSRVTFK 42


>gi|238927617|ref|ZP_04659377.1| flagellar basal body rod protein [Selenomonas flueggei ATCC 43531]
 gi|238884542|gb|EEQ48180.1| flagellar basal body rod protein [Selenomonas flueggei ATCC 43531]
          Length = 264

 Score = 60.3 bits (144), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 21/102 (20%), Positives = 36/102 (35%), Gaps = 2/102 (1%)

Query: 34  TTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANA--SGIVK 91
             G     +  +     F      +   +   +  D S    E +PG   A     G ++
Sbjct: 163 EAGQNQQQEAGQITLARFVNPAGLTAVGKNLFVVSDASGEAIESNPGEDGAGTLTQGTLE 222

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             NV ++ E  +M  + R Y +N + I  S  M+     L R
Sbjct: 223 MSNVQIVEEMVNMIVSQRAYESNSKAITTSDSMLEIANQLKR 264



 Score = 44.5 bits (103), Expect = 0.006,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 23/57 (40%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          ++ +   A SG+  Q ++M +++ NIAN  T G       ++              G
Sbjct: 1  MMRALWSAASGMKAQQSQMDVVAHNIANVNTYGGKKVRAEFQDLVYQTLREAGARNG 57


>gi|268316347|ref|YP_003290066.1| hypothetical protein Rmar_0780 [Rhodothermus marinus DSM 4252]
 gi|262333881|gb|ACY47678.1| protein of unknown function DUF1078 domain protein [Rhodothermus
           marinus DSM 4252]
          Length = 415

 Score = 60.3 bits (144), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 26/53 (49%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +     +G ++  NV++  E  DM  T R Y A+ + I  S +M+   + L R
Sbjct: 363 NRTVIVAGTLEMSNVDLATEFTDMIVTQRGYQASARIITTSDEMLQELVQLKR 415



 Score = 45.2 bits (105), Expect = 0.003,   Method: Composition-based stats.
 Identities = 16/41 (39%), Positives = 19/41 (46%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I S     SGL     RM +IS NIAN  TT    G   +
Sbjct: 1  MIRSLRTGVSGLKSHQVRMDVISNNIANVNTTAFKRGRAAF 41


>gi|39998142|ref|NP_954093.1| flagellar basal body rod protein FlgG [Geobacter sulfurreducens
           PCA]
 gi|39985088|gb|AAR36443.1| flagellar basal-body rod protein FlgG [Geobacter sulfurreducens
           PCA]
 gi|298507079|gb|ADI85802.1| flagellar basal body rod protein FlgG [Geobacter sulfurreducens
           KN400]
          Length = 262

 Score = 60.3 bits (144), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 18/131 (13%), Positives = 43/131 (32%), Gaps = 3/131 (2%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            ++    + ++  ++       +S   A              +  T S    +   G   
Sbjct: 135 PMLPELVVPSNATSISVGNDGTVSVTQA---GQTSPTNIGNIQLATFSNPSGLTALGRNL 191

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
            ++     +              A G ++  NV+V+ E  +M    R Y  N + ++ + 
Sbjct: 192 FQESDSSGTPTTGTPGQNGIGTLAQGFLEMSNVSVMEEMVNMIVGQRAYEVNSKAVQAAD 251

Query: 123 DMMTTTLDLLR 133
           +M+    +L R
Sbjct: 252 EMLQQANNLRR 262



 Score = 42.2 bits (97), Expect = 0.023,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 20/42 (47%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          +I +   A SG+  Q   + +++ N+AN  T G       ++
Sbjct: 1  MIRALWTAASGMQAQQTNIDVVANNLANVNTAGFKKSRADFQ 42


>gi|219685570|ref|ZP_03540386.1| flagellar basal-body rod protein FlgG [Borrelia garinii Far04]
 gi|219672848|gb|EED29871.1| flagellar basal-body rod protein FlgG [Borrelia garinii Far04]
          Length = 265

 Score = 60.3 bits (144), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 35/111 (31%), Gaps = 3/111 (2%)

Query: 23  QIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHP 82
            I+S  I N+    +    +            +   G    K+                 
Sbjct: 157 GIVSVKIDNSNEPIELGQIE---ISRFVNPAGLSAIGSNLFKETAGSGQEITGIPGSEGM 213

Query: 83  VANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
                GI++  NV++  E   M    R Y  N + I+ S +M+    +L R
Sbjct: 214 GILRQGILEMSNVSIAEEMVTMIVAQRAYEINSKAIQTSDNMLGIANNLKR 264



 Score = 41.8 bits (96), Expect = 0.036,   Method: Composition-based stats.
 Identities = 10/33 (30%), Positives = 18/33 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ +   A SG+  Q   +  I+ N++N  TTG
Sbjct: 1  MMRALWTAASGMTAQQYNVDTIANNLSNVNTTG 33


>gi|306846278|ref|ZP_07478839.1| flagellar basal-body rod protein FlgG [Brucella sp. BO1]
 gi|306273273|gb|EFM55142.1| flagellar basal-body rod protein FlgG [Brucella sp. BO1]
          Length = 262

 Score = 60.3 bits (144), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 16/79 (20%), Positives = 30/79 (37%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            + E  +   GG   ++     S  V         +   G ++  NV+ + E  D+    
Sbjct: 178 FTNEAGLEPLGGNLYRETEASGSPLVGVPGDPGYGSIKQGYLEASNVDPVKEITDLITAQ 237

Query: 109 RLYMANLQTIKQSHDMMTT 127
           R Y  N + I+ + +M  T
Sbjct: 238 RAYEMNSKVIQAADEMAAT 256



 Score = 44.9 bits (104), Expect = 0.004,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 21/40 (52%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          + +  IA +G+  Q   +++I+ NIAN  TTG       +
Sbjct: 1  MKALTIAATGMNAQQLNLEVIANNIANINTTGFKRARAEF 40


>gi|319764541|ref|YP_004128478.1| flagellar basal-body rod protein flgg [Alicycliphilus denitrificans
           BC]
 gi|317119102|gb|ADV01591.1| flagellar basal-body rod protein FlgG [Alicycliphilus denitrificans
           BC]
          Length = 260

 Score = 60.3 bits (144), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 22/130 (16%), Positives = 41/130 (31%), Gaps = 5/130 (3%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIA-NARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            +     +     ++  +   ++S  IA NA+              +      +   G  
Sbjct: 135 PVANGITVPQGATSISISETGVVSATIAGNAQPQQLGQ----LAMSSFINAAGLQPVGQN 190

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
             K+          +           G ++  NVNV+ E   M +T R Y  N + I+ S
Sbjct: 191 MYKESAASGPPQQGQPGTNGLGVIKQGFLETSNVNVVEELVTMIQTQRAYEMNSKAIQTS 250

Query: 122 HDMMTTTLDL 131
             M+     L
Sbjct: 251 DQMLAKLSQL 260



 Score = 44.1 bits (102), Expect = 0.007,   Method: Composition-based stats.
 Identities = 15/41 (36%), Positives = 24/41 (58%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I S  IA +G++ Q  ++ +IS N+AN  TTG    S  +
Sbjct: 1  MINSLWIAKTGMSAQQTQLDVISHNLANVSTTGFKRNSAVF 41


>gi|309388826|gb|ADO76706.1| flagellar hook-basal body protein [Halanaerobium praevalens DSM
           2228]
          Length = 548

 Score = 60.3 bits (144), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 27/62 (43%)

Query: 72  TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             + E   G   + A   ++  N N+  E  +M    R + AN + I  S +M+   ++L
Sbjct: 487 AGIGEPAQGGFGSLAPSTLEMSNANLSQEFTNMITAQRGFQANSKLITTSDEMLQELVNL 546

Query: 132 LR 133
            R
Sbjct: 547 KR 548


>gi|121607559|ref|YP_995366.1| flagellar basal-body rod protein FlgG [Verminephrobacter eiseniae
           EF01-2]
 gi|121552199|gb|ABM56348.1| flagellar basal-body rod protein FlgG [Verminephrobacter eiseniae
           EF01-2]
          Length = 260

 Score = 60.3 bits (144), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 22/132 (16%), Positives = 40/132 (30%), Gaps = 9/132 (6%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY---RRKTISFEEVMHGSG 59
            +     IA + ++V       IS   A +     +    P       +      +   G
Sbjct: 135 PVANGITIAANAISV------SISAEGAVSAIMPGSVQPQPLGNLAMASFINPAGLEPIG 188

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
               K+                      G ++  N+N++ E   M +T R Y  N + I+
Sbjct: 189 QNLFKESAASGQPQQGIPGSNGLGVIKQGFLEASNINIVEELVTMIQTQRAYEMNSKAIQ 248

Query: 120 QSHDMMTTTLDL 131
            S  M+     L
Sbjct: 249 TSDQMLAKLSQL 260



 Score = 42.6 bits (98), Expect = 0.017,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 23/39 (58%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSD 42
          +I +  IA +G++ Q  ++ +I+ N+AN  TTG    + 
Sbjct: 1  MIDALWIAKTGMSAQQTQLDVIAHNLANVSTTGYKRSNA 39


>gi|308173591|ref|YP_003920296.1| flagellar hook protein [Bacillus amyloliquefaciens DSM 7]
 gi|307606455|emb|CBI42826.1| flagellar hook protein [Bacillus amyloliquefaciens DSM 7]
 gi|328553477|gb|AEB23969.1| flagellar basal body rod protein FlgG [Bacillus amyloliquefaciens
           TA208]
 gi|328911732|gb|AEB63328.1| flagellar hook protein [Bacillus amyloliquefaciens LL3]
          Length = 258

 Score = 60.3 bits (144), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 24/46 (52%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  NV++  E  +M    R + +N + I  S +++   ++L R
Sbjct: 213 GYLEMSNVDLTDEFTEMIVAQRGFQSNSKIITTSDEILQELVNLKR 258



 Score = 36.4 bits (82), Expect = 1.4,   Method: Composition-based stats.
 Identities = 15/84 (17%), Positives = 28/84 (33%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ S +   SG+     ++ +I  NIAN  T G       ++                + 
Sbjct: 1  MLRSLYSGISGMKNFQTKLDVIGNNIANVNTVGFKKSRVTFKDMISQTVAGGSNVTNSKQ 60

Query: 64 KKIGVDQSTFVEEFDPGHPVANAS 87
            +G   S+       G P A  +
Sbjct: 61 IGLGAATSSIDVVHSTGAPQATQN 84


>gi|319409169|emb|CBI82813.1| Flagellar hook protein FlgE [Bartonella schoenbuchensis R1]
          Length = 403

 Score = 60.3 bits (144), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 23/131 (17%), Positives = 42/131 (32%), Gaps = 2/131 (1%)

Query: 5   IASAHIANSGLAVQSARMQIISEN--IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
           +++  +   G+   +        N  I    T             T++  E +    G  
Sbjct: 273 LSAFELEADGMESGAFDGFTFGRNGEIEVRYTNHQMRVVGYVGMTTVTSPESLTVLSGSV 332

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
                      +     G      SG ++  NV +  E  DM E  R Y AN +  +   
Sbjct: 333 FGTNSRTGGQMMGRPGDGVFGLLFSGYLEDSNVEMSDELTDMIEAQRNYTANSKVFQTGS 392

Query: 123 DMMTTTLDLLR 133
           ++M   ++L R
Sbjct: 393 ELMDVIVNLKR 403



 Score = 48.3 bits (113), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/110 (17%), Positives = 35/110 (31%), Gaps = 2/110 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             +        SG+  Q  R+  ++EN+AN  T G       +    I   +  +  GG 
Sbjct: 1   MSIYGMMRTGVSGMNAQGTRLSGVAENVANVNTIGYKRTDVQFSNYVIPSGDYAYVPGGA 60

Query: 62  R--VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNR 109
           R  V                G  + + +G  +  + N +         +R
Sbjct: 61  RSYVGHDISISGPARATGRMGDVMIDGNGFFRVADENGIEYLTRAGSFSR 110


>gi|328958276|ref|YP_004375662.1| flagellar basal body rod protein FlgG [Carnobacterium sp. 17-4]
 gi|328674600|gb|AEB30646.1| flagellar basal body rod protein FlgG [Carnobacterium sp. 17-4]
          Length = 289

 Score = 60.3 bits (144), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 34/85 (40%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            S  + +  +GG                       +  SG ++  NV++  E  +M  T+
Sbjct: 205 FSNPDGLQKNGGNLYSASANSGDPVAGNPGDAGYGSVRSGFLEMSNVDLANEFTEMIVTS 264

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R Y AN ++I  S  M+   ++L R
Sbjct: 265 RSYQANSRSITTSDTMLEELINLKR 289



 Score = 35.2 bits (79), Expect = 2.7,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          ++ S +   +G+     +M +IS NIAN  TT    G   +
Sbjct: 1  MLKSLYSGVTGMKNIQTKMDVISNNIANVNTTAFKTGRVRF 41


>gi|163781856|ref|ZP_02176856.1| flagellar hook protein FlgE [Hydrogenivirga sp. 128-5-R1-1]
 gi|159883076|gb|EDP76580.1| flagellar hook protein FlgE [Hydrogenivirga sp. 128-5-R1-1]
          Length = 494

 Score = 60.3 bits (144), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 28/48 (58%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            SG+++  NV++  E  ++    R Y AN + I  S+ ++  T++L+R
Sbjct: 447 RSGMLEMSNVDIAKEFINLITAQRAYQANARVITTSNTILDETVNLVR 494



 Score = 35.6 bits (80), Expect = 2.5,   Method: Composition-based stats.
 Identities = 7/33 (21%), Positives = 16/33 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ S   A +G+      + + S+N++N  T  
Sbjct: 1  MLRSFFNAVTGMDASRFWIDVTSDNLSNVNTVA 33


>gi|17548568|ref|NP_521908.1| flagellar basal-body rod protein FlgG [Ralstonia solanacearum
           GMI1000]
 gi|17430816|emb|CAD17498.1| probable flagellar basal-body rod protein flgg (distal rod protein)
           [Ralstonia solanacearum GMI1000]
          Length = 260

 Score = 60.3 bits (144), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 15/95 (15%), Positives = 31/95 (32%)

Query: 37  DTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVN 96
           ++     ++         +   G     +     +  +               V+  NVN
Sbjct: 166 NSTQVGTFQLANFINPAGLRSMGENLYAETEASGTANLAAPGSNGIGVLNQNYVETSNVN 225

Query: 97  VLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           V+ E  +M +T R Y  N + ++ S  M+     L
Sbjct: 226 VVEEMVNMIQTQRAYEINSKAVQTSDQMLEKLAQL 260



 Score = 41.4 bits (95), Expect = 0.041,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 23/41 (56%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I S  I+ +G+  Q +++ +IS N+AN  TTG       +
Sbjct: 1  MIRSLWISKTGMDAQQSQLDVISNNLANVNTTGFKRSRAVF 41


>gi|315637964|ref|ZP_07893150.1| flagellar basal-body rod protein FlgG [Campylobacter upsaliensis
           JV21]
 gi|315481999|gb|EFU72617.1| flagellar basal-body rod protein FlgG [Campylobacter upsaliensis
           JV21]
          Length = 263

 Score = 60.3 bits (144), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 17/86 (19%), Positives = 27/86 (31%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                  +H  G     + G   +                G V+  NV ++ E  D+   
Sbjct: 178 QFINPAGLHSMGDNLYLETGASGAPVAGIAGQDGLGNIRHGFVELSNVQLVEEMTDLITG 237

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y A  + I  S +M+     L R
Sbjct: 238 QRAYEAGSKAITTSDEMLGIVNQLKR 263



 Score = 40.6 bits (93), Expect = 0.066,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 20/42 (47%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S H A +G+  Q  ++ + S NI+N  T G       + 
Sbjct: 1  MMRSLHTAATGMVAQQTQIDVTSNNISNVNTVGFKKSRAEFA 42


>gi|291613040|ref|YP_003523197.1| flagellar basal-body rod protein FlgG [Sideroxydans lithotrophicus
           ES-1]
 gi|291583152|gb|ADE10810.1| flagellar basal-body rod protein FlgG [Sideroxydans lithotrophicus
           ES-1]
          Length = 260

 Score = 60.3 bits (144), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 17/84 (20%), Positives = 29/84 (34%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
           T      +   G     +     +            + + G V+  NVNV+ E  +M +T
Sbjct: 177 TFINPTGLESMGQNMYLETASSGTPSTNVPGTNGTGSISQGYVETSNVNVVEELVNMIQT 236

Query: 108 NRLYMANLQTIKQSHDMMTTTLDL 131
            R Y  N + I  S  M+     +
Sbjct: 237 QRAYEINSKAITVSDQMLQKLAQM 260



 Score = 41.8 bits (96), Expect = 0.035,   Method: Composition-based stats.
 Identities = 16/91 (17%), Positives = 28/91 (30%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I S  I+ +GL  Q  +M +IS N+AN  T G       +                 + 
Sbjct: 1  MIRSLWISKTGLEAQQTQMDVISNNLANVSTNGFKRSRAVFEDLLYQNLRQPGAQSSQQT 60

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIVKYPN 94
          +     Q            +     + +  N
Sbjct: 61 QIPSGLQIGTGVRPVATERIHTQGNLQQTSN 91


>gi|94312671|ref|YP_585880.1| flagellar basal body distal rod protein [Cupriavidus metallidurans
           CH34]
 gi|93356523|gb|ABF10611.1| flagellar basal body distal rod protein [Cupriavidus metallidurans
           CH34]
          Length = 261

 Score = 60.3 bits (144), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 25/117 (21%), Positives = 39/117 (33%), Gaps = 7/117 (5%)

Query: 23  QIISENIAN-----ARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEF 77
              S NIA          G T  +   + +  +F              +  D S      
Sbjct: 145 NYTSVNIARDGTVTVMQPGSTNAATVGQLQLATFPNPTGLESMGENLYVQTDASGAPNTT 204

Query: 78  DPGHPVAN--ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
            PG   A    +  V+  NVNV+ E   M +T R Y  N + ++ S  M+     + 
Sbjct: 205 VPGLNGAGTLQNNYVEASNVNVVEELVSMIQTQRAYEINSKAVQTSDQMLQRLTQMG 261



 Score = 40.6 bits (93), Expect = 0.067,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 23/61 (37%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I S  IA +GL  Q  +M +IS N+AN  TTG       +                 + 
Sbjct: 1  MIRSLWIAKTGLDAQQTQMDVISNNLANVSTTGFKRSRAVFEEMMYQTIRQPGAMSSDQT 60

Query: 64 K 64
           
Sbjct: 61 V 61


>gi|289578425|ref|YP_003477052.1| fagellar hook-basal body protein [Thermoanaerobacter italicus Ab9]
 gi|289528138|gb|ADD02490.1| fagellar hook-basal body protein [Thermoanaerobacter italicus Ab9]
          Length = 413

 Score = 60.3 bits (144), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 31/85 (36%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +   G              +     G   +   G ++  NV++  E ADM  T 
Sbjct: 329 FQNPMGLEKVGNTMFINTVNSGEPMIGAAGTGTRGSINPGTLEMSNVDLANEFADMIVTQ 388

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R + AN + I  S +M+   +++ R
Sbjct: 389 RGFQANAKIITASDEMLQDLVNMKR 413



 Score = 42.2 bits (97), Expect = 0.028,   Method: Composition-based stats.
 Identities = 15/42 (35%), Positives = 21/42 (50%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S + A SGL    ARM +I  NIAN  T G       ++
Sbjct: 1  MLRSMYSAVSGLKAHQARMDVIGNNIANVNTVGYKASRMTFK 42


>gi|87119674|ref|ZP_01075571.1| Flagella basal body rod protein [Marinomonas sp. MED121]
 gi|86165150|gb|EAQ66418.1| Flagella basal body rod protein [Marinomonas sp. MED121]
          Length = 261

 Score = 60.3 bits (144), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 16/121 (13%), Positives = 36/121 (29%), Gaps = 3/121 (2%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVD 69
           I    ++V       +S      +   ++ G            E +   G     +    
Sbjct: 142 IPQDAMSVTIGDDGTVS---IVRQGASESEGVGQLSLAGFINPEGLSSIGQNLFVETSAS 198

Query: 70  QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
            +  ++             +V+  NVN + E   +    R Y  N + +  +  MM+  +
Sbjct: 199 GAPIIDVPGTSALGNVRQNMVETSNVNSVEELVSLITAQRGYEMNSKVVSAADGMMSFVI 258

Query: 130 D 130
            
Sbjct: 259 Q 259



 Score = 36.8 bits (83), Expect = 1.0,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 21/41 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  +  ++ +GL+    ++ +IS N+AN  TTG       +
Sbjct: 1  MHPALWVSKTGLSAMDKQLSVISNNLANVSTTGFKKDRAVF 41


>gi|171059410|ref|YP_001791759.1| flagellar basal-body rod protein FlgG [Leptothrix cholodnii SP-6]
 gi|170776855|gb|ACB34994.1| flagellar basal-body rod protein FlgG [Leptothrix cholodnii SP-6]
          Length = 260

 Score = 60.3 bits (144), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 17/83 (20%), Positives = 28/83 (33%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +   GG    +     +            + + G ++  NVNV+ E   M +T 
Sbjct: 178 FINPAGLEAKGGNLYTETASSGTPNGGAPGSNGLGSLSQGFLETSNVNVVEELVTMIQTQ 237

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y  N + I  S  M+     L
Sbjct: 238 RAYELNSKAISTSDQMLQKLGQL 260



 Score = 43.3 bits (100), Expect = 0.012,   Method: Composition-based stats.
 Identities = 9/35 (25%), Positives = 20/35 (57%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDT 38
          ++ +  I+ +G+  Q  ++ ++S N+AN  T G  
Sbjct: 1  MMRALWISKTGMEAQQTQLDVVSNNLANVATNGYK 35


>gi|57505521|ref|ZP_00371448.1| flagellar basal-body rod protein (flgG) [Campylobacter upsaliensis
           RM3195]
 gi|57016068|gb|EAL52855.1| flagellar basal-body rod protein (flgG) [Campylobacter upsaliensis
           RM3195]
          Length = 263

 Score = 60.3 bits (144), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 17/86 (19%), Positives = 27/86 (31%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                  +H  G     + G   +                G V+  NV ++ E  D+   
Sbjct: 178 QFINPAGLHSMGDNLYLETGASGAPVAGIAGQDGLGNIRHGFVELSNVQLVEEMTDLITG 237

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y A  + I  S +M+     L R
Sbjct: 238 QRAYEAGSKAITTSDEMLGIVNQLKR 263



 Score = 40.6 bits (93), Expect = 0.066,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 20/42 (47%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S H A +G+  Q  ++ + S NI+N  T G       + 
Sbjct: 1  MMRSLHTAATGMVAQQTQIDVTSNNISNVNTVGFKKSRAEFA 42


>gi|304316900|ref|YP_003852045.1| fagellar hook-basal body protein [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302778402|gb|ADL68961.1| fagellar hook-basal body protein [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 420

 Score = 60.3 bits (144), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 32/85 (37%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
               + +   G              +   + G       G ++  NV++  E A+M  T 
Sbjct: 336 FQNTQGLEKVGNTMFINTVNSGDPMIGAANTGTRGTINPGTLEMSNVDLANEFANMITTQ 395

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R + AN + I  S +++   ++L R
Sbjct: 396 RGFEANSKVITTSDEILQDLVNLKR 420



 Score = 38.7 bits (88), Expect = 0.25,   Method: Composition-based stats.
 Identities = 14/42 (33%), Positives = 20/42 (47%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S + A SGL    A M +I  NIAN  T G       ++
Sbjct: 1  MLRSMYSAVSGLKAHQAEMDVIGNNIANVNTVGFKASRMTFK 42


>gi|297544701|ref|YP_003677003.1| fagellar hook-basal body protein [Thermoanaerobacter mathranii
           subsp. mathranii str. A3]
 gi|296842476|gb|ADH60992.1| fagellar hook-basal body protein [Thermoanaerobacter mathranii
           subsp. mathranii str. A3]
          Length = 413

 Score = 60.3 bits (144), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 31/85 (36%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +   G              +     G   +   G ++  NV++  E ADM  T 
Sbjct: 329 FQNPMGLEKVGNTMFINTVNSGEPMIGAAGTGTRGSINPGTLEMSNVDLANEFADMIVTQ 388

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R + AN + I  S +M+   +++ R
Sbjct: 389 RGFQANAKIITASDEMLQDLVNMKR 413



 Score = 39.5 bits (90), Expect = 0.15,   Method: Composition-based stats.
 Identities = 15/42 (35%), Positives = 21/42 (50%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S + A SGL    ARM +I  NIAN  T G       ++
Sbjct: 1  MLRSMYSAVSGLKSHQARMDVIGNNIANVNTVGYKASRMTFK 42


>gi|167835113|ref|ZP_02461996.1| flagellar basal body rod protein FlgG [Burkholderia thailandensis
           MSMB43]
          Length = 262

 Score = 60.3 bits (144), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 19/100 (19%), Positives = 34/100 (34%)

Query: 34  TTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
            + +       +  T      +   G     +     +  V +           G V+  
Sbjct: 163 GSNNAVQIGALQIATFINPAGLDAKGENLFAETTSSGAPNVSQPGLNGAGTLKQGYVESS 222

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           NVNV+ E  +M +T R Y  N + +  S  M+ T   + R
Sbjct: 223 NVNVVQELVNMIQTQRAYEINSKAVTTSDQMLQTVTQMSR 262



 Score = 40.6 bits (93), Expect = 0.069,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 22/41 (53%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  S +IA +G+  Q A+M +IS N+AN  T G       +
Sbjct: 1  MNRSLYIAATGMNAQQAQMDVISNNLANVSTNGFKGSRAVF 41


>gi|332531620|ref|ZP_08407517.1| flagellar basal-body rod FlgG [Hylemonella gracilis ATCC 19624]
 gi|332038983|gb|EGI75412.1| flagellar basal-body rod FlgG [Hylemonella gracilis ATCC 19624]
          Length = 259

 Score = 60.3 bits (144), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 37/124 (29%), Gaps = 12/124 (9%)

Query: 8   AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
             IA+ G        Q +++ I N                T      +   G     +  
Sbjct: 148 LSIADDGTVTAKLPGQTVAQTIGNI------------TLATFINPAGLEAKGQNLFAETA 195

Query: 68  VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
              +                G ++  NVNV+ E   M +T R Y  N + I+ S  M+  
Sbjct: 196 ASGTPNTGAPSANGIGKLMQGYLESSNVNVVQELVTMIQTQRAYEMNSKAIQTSDQMLQK 255

Query: 128 TLDL 131
              L
Sbjct: 256 LGQL 259



 Score = 43.7 bits (101), Expect = 0.009,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 21/41 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  S  IA +G+  Q  ++  IS N+AN+ T G    S  +
Sbjct: 1  MFNSLWIAKTGMEAQQRQLDTISNNLANSSTNGFKRSSVVF 41


>gi|120554035|ref|YP_958386.1| flagellar basal body rod protein FlgG [Marinobacter aquaeolei VT8]
 gi|120323884|gb|ABM18199.1| flagellar basal-body rod protein FlgG [Marinobacter aquaeolei VT8]
          Length = 262

 Score = 60.3 bits (144), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 17/130 (13%), Positives = 39/130 (30%), Gaps = 4/130 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           L  + ++ N+   +       ++   A                      + +   G    
Sbjct: 136 LEPAINVPNNATNITIGTDGTVT---AITDDQAAPVNVGQITLVDFINPQGLQAIGNNLF 192

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
           K+     +    +           G ++  NV V+ E  +M  T R Y  N + +  +  
Sbjct: 193 KETISSGNPIEGQAGLLGLGTIEQGSLEASNVEVVEELVNMITTQRAYEMNSKVVSTADQ 252

Query: 124 MMT-TTLDLL 132
           M+   T ++ 
Sbjct: 253 MLQFITNNIG 262



 Score = 42.6 bits (98), Expect = 0.020,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 21/42 (50%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          +  +  ++ +GL+ Q   M  IS N+AN  TTG       ++
Sbjct: 1  MNPALWVSKTGLSAQDINMSTISNNLANVNTTGFKRDKAVFQ 42


>gi|317154735|ref|YP_004122783.1| flagellar hook-basal body protein [Desulfovibrio aespoeensis
           Aspo-2]
 gi|316944986|gb|ADU64037.1| flagellar hook-basal body protein [Desulfovibrio aespoeensis
           Aspo-2]
          Length = 554

 Score = 60.3 bits (144), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 14/86 (16%), Positives = 29/86 (33%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
           T + +  +   GG    +          +             ++  NV++  E   M  T
Sbjct: 469 TFTNKHGLRREGGNLFSETRESGPALTGQAGSSGKGTVDGNALELSNVDMATEFVRMITT 528

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R + AN + I  +  M+   + + R
Sbjct: 529 QRGFQANTKVITTTDSMLGEVIAMKR 554



 Score = 36.0 bits (81), Expect = 1.8,   Method: Composition-based stats.
 Identities = 22/72 (30%), Positives = 30/72 (41%), Gaps = 4/72 (5%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-- 59
            L +S +   +GL V S RM +I  N+AN  T G       +          ++G G  
Sbjct: 1  MGLGSSLYAGITGLTVHSERMTVIGNNLANVNTVGFKGTWMQFEDLLSQDFATVNGVGQI 60

Query: 60 --GVRVKKIGVD 69
            GVRV  I  D
Sbjct: 61 GRGVRVSTIYSD 72


>gi|303240279|ref|ZP_07326798.1| fagellar hook-basal body protein [Acetivibrio cellulolyticus CD2]
 gi|302592189|gb|EFL61918.1| fagellar hook-basal body protein [Acetivibrio cellulolyticus CD2]
          Length = 439

 Score = 60.3 bits (144), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 25/48 (52%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             G ++  NV++  E  DM  T R + AN + I  S +M+   ++L R
Sbjct: 392 NPGTLEMSNVDLSTEFTDMIVTQRGFQANSRIITTSDEMLQELVNLKR 439



 Score = 41.0 bits (94), Expect = 0.049,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 18/42 (42%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S     SGL     +M +I  N+AN  T     G   ++
Sbjct: 1  MMRSMFSGVSGLRAHQTKMDVIGNNVANVNTVAYKSGRVTFQ 42


>gi|238916190|ref|YP_002929707.1| flagellar basal-body rod protein FlgG [Eubacterium eligens ATCC
           27750]
 gi|238871550|gb|ACR71260.1| flagellar basal-body rod protein FlgG [Eubacterium eligens ATCC
           27750]
          Length = 277

 Score = 60.3 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 18/48 (37%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
               ++  NV V  E  ++    R Y    + I  S  MM    +L R
Sbjct: 230 RQSYLEASNVQVATEMVNLITAQRAYELCSKAITTSDTMMEQANNLKR 277



 Score = 43.3 bits (100), Expect = 0.011,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 24/64 (37%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ S   A SG+  Q   +  I+ N+AN  T G       ++       +    S     
Sbjct: 1  MMRSLWTAASGMMSQQTSVDTIANNLANVNTIGYKQEQTQFKSLLYQNLQAKTTSANGDD 60

Query: 64 KKIG 67
          K +G
Sbjct: 61 KPVG 64


>gi|189426344|ref|YP_001953521.1| hypothetical protein Glov_3295 [Geobacter lovleyi SZ]
 gi|189422603|gb|ACD97001.1| protein of unknown function DUF1078 domain protein [Geobacter
           lovleyi SZ]
          Length = 296

 Score = 60.3 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 16/47 (34%), Positives = 24/47 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           S  ++  NV++  E   M  T R Y AN +TI  + +M    L+L R
Sbjct: 250 SNNLELSNVDMATEMVKMILTQRAYSANSKTITTADEMTQEVLNLKR 296


>gi|51599025|ref|YP_073213.1| flagellar basal body rod protein FlgG [Borrelia garinii PBi]
 gi|51573596|gb|AAU07621.1| flagellar basal-body rod protein [Borrelia garinii PBi]
          Length = 265

 Score = 60.3 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 34/111 (30%), Gaps = 3/111 (2%)

Query: 23  QIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHP 82
            I+S  I N+    +    +            +   G    K+                 
Sbjct: 157 GIVSVKIDNSNEPIELGQIE---ISRFVNPAGLSAIGSNLFKETAGSGQEIAGIPGSEGM 213

Query: 83  VANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
                 I++  NV++  E   M    R Y  N + I+ S +M+    +L R
Sbjct: 214 GILRQSILEMSNVSIAEEMVTMIVAQRAYEINSKAIQTSDNMLGIANNLKR 264



 Score = 41.4 bits (95), Expect = 0.037,   Method: Composition-based stats.
 Identities = 10/33 (30%), Positives = 18/33 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ +   A SG+  Q   +  I+ N++N  TTG
Sbjct: 1  MMRALWTAASGMTAQQYNVDTIANNLSNVNTTG 33


>gi|221069320|ref|ZP_03545425.1| flagellar basal-body rod protein FlgG [Comamonas testosteroni KF-1]
 gi|220714343|gb|EED69711.1| flagellar basal-body rod protein FlgG [Comamonas testosteroni KF-1]
          Length = 260

 Score = 60.3 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 19/129 (14%), Positives = 33/129 (25%), Gaps = 3/129 (2%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            +     I      V  +   ++S  +                         +   G   
Sbjct: 135 PVANGITIPQGATKVSISHDGVVSVTM---PGQAAPQQVGNIAMSQFINAAGLEPRGQNL 191

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
             +                      G ++  NVNV+ E   M +T R Y  N + I+ S 
Sbjct: 192 YVETASSGQPQQGTPGTNGLGTIQQGYLEASNVNVVQELVTMIQTQRAYEMNSKAIQTSD 251

Query: 123 DMMTTTLDL 131
            M+     L
Sbjct: 252 QMLAKLAQL 260



 Score = 41.0 bits (94), Expect = 0.058,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 23/41 (56%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I S  IA +G+  Q  ++ +IS N+AN  TTG    +  +
Sbjct: 1  MINSLFIAKTGMEAQQTQLDVISHNLANVSTTGYKRANAVF 41


>gi|299068734|emb|CBJ39973.1| FlgG: Flagellar basal-body rod protein [Ralstonia solanacearum
           CMR15]
          Length = 260

 Score = 60.3 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 15/95 (15%), Positives = 31/95 (32%)

Query: 37  DTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVN 96
           ++     ++         +   G     +     +  +               V+  NVN
Sbjct: 166 NSTQVGTFQLANFINPAGLRSMGENLYAETEASGTANLAAPGANGVGVLNQNYVETSNVN 225

Query: 97  VLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           V+ E  +M +T R Y  N + ++ S  M+     L
Sbjct: 226 VVEEMVNMIQTQRAYEINSKAVQTSDQMLEKLAQL 260



 Score = 41.4 bits (95), Expect = 0.042,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 23/41 (56%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I S  I+ +G+  Q +++ +IS N+AN  TTG       +
Sbjct: 1  MIRSLWISKTGMDAQQSQLDVISNNLANVNTTGFKRSRAVF 41


>gi|299534778|ref|ZP_07048108.1| flagellar basal-body rod protein flgG [Lysinibacillus fusiformis
           ZC1]
 gi|298729866|gb|EFI70411.1| flagellar basal-body rod protein flgG [Lysinibacillus fusiformis
           ZC1]
          Length = 322

 Score = 60.3 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 15/79 (18%), Positives = 32/79 (40%)

Query: 55  MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
           +   GG   ++     + + +            G V+  NV++  E  +M    R + AN
Sbjct: 244 LAKVGGNYYQQTANSGAAYAQVATVAGMGKVVPGTVEMSNVDLSEEFTEMIVAQRGFQAN 303

Query: 115 LQTIKQSHDMMTTTLDLLR 133
            + I  S +++   ++L R
Sbjct: 304 TRIITTSDEVLQELVNLKR 322



 Score = 35.6 bits (80), Expect = 2.1,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 28/68 (41%), Gaps = 4/68 (5%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR----RKTISFEEVMHGSG 59
          ++ S +   SGL     ++ +I  NIAN  T G   G   ++    +            G
Sbjct: 1  MLRSMYSGISGLKNFQTKLDVIGNNIANVNTIGFKKGRVNFKDLMSQTQAGASAATATRG 60

Query: 60 GVRVKKIG 67
          GV  +++G
Sbjct: 61 GVNPQQVG 68


>gi|226327742|ref|ZP_03803260.1| hypothetical protein PROPEN_01615 [Proteus penneri ATCC 35198]
 gi|225203446|gb|EEG85800.1| hypothetical protein PROPEN_01615 [Proteus penneri ATCC 35198]
          Length = 111

 Score = 60.3 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 21/111 (18%), Positives = 32/111 (28%), Gaps = 3/111 (2%)

Query: 21  RMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPG 80
           R   +S  I     +            T   +  +   G     +     +         
Sbjct: 4   RDGTVSVEI---EGSPAPQQVGQLTLTTFINDSGLESVGENLYLETASSGAPTENAPGIN 60

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
                  G V+  NVNV  E  +M +T R Y  N + I  S  M+     L
Sbjct: 61  GAGLLYQGYVETSNVNVAEELVNMIQTQRAYEINSKAISTSDQMLQKLTQL 111


>gi|218886899|ref|YP_002436220.1| hypothetical protein DvMF_1808 [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|218757853|gb|ACL08752.1| protein of unknown function DUF1078 domain protein [Desulfovibrio
           vulgaris str. 'Miyazaki F']
          Length = 501

 Score = 60.3 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 21/131 (16%), Positives = 41/131 (31%), Gaps = 13/131 (9%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
             +A   I+  G+            N  N      T           + E+ +   G   
Sbjct: 383 GFLAGIDISADGIITGRY------SNGQNDDLYHIT-------LYRFTSEDGLRREGMNH 429

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
                   +      D  +    A+  ++  NV++  E  +M    R +  N ++I  + 
Sbjct: 430 FSATLESGAAQEGLPDTQNYGTVAAKSLEQSNVSMEREFVNMIIYQRGFQTNSKSIMTAD 489

Query: 123 DMMTTTLDLLR 133
            M+   L+L R
Sbjct: 490 SMIQKALELKR 500


>gi|307293785|ref|ZP_07573629.1| flagellar basal-body rod protein FlgG [Sphingobium chlorophenolicum
           L-1]
 gi|306879936|gb|EFN11153.1| flagellar basal-body rod protein FlgG [Sphingobium chlorophenolicum
           L-1]
          Length = 262

 Score = 60.3 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 33/82 (40%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +  +GG  +K+     +  V            SG ++  NVNV+ E  DM ET 
Sbjct: 179 FMNPGGLQSTGGNLLKETAASGTPQVGVAGLDGRGVVRSGYLETSNVNVVEELVDMIETQ 238

Query: 109 RLYMANLQTIKQSHDMMTTTLD 130
           R Y  N + IK + +M+     
Sbjct: 239 RAYEVNSKMIKATDEMLQYANQ 260



 Score = 39.1 bits (89), Expect = 0.20,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 23/39 (58%)

Query: 6  ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          A+ H+A +GL  Q+ +M++I+ N+AN  TT        +
Sbjct: 4  AALHVARTGLDAQNTKMRVIANNLANVNTTAFKRDRADF 42


>gi|83747652|ref|ZP_00944688.1| FlgG [Ralstonia solanacearum UW551]
 gi|207728348|ref|YP_002256742.1| flagellar basal-body rod protein flgg (distal rod protein)
           [Ralstonia solanacearum MolK2]
 gi|207739735|ref|YP_002258128.1| flagellar basal-body rod protein flgg (distal rod protein)
           [Ralstonia solanacearum IPO1609]
 gi|300696915|ref|YP_003747576.1| FlgG: flagellar basal-body rod protein [Ralstonia solanacearum
           CFBP2957]
 gi|83725704|gb|EAP72846.1| FlgG [Ralstonia solanacearum UW551]
 gi|206591594|emb|CAQ57206.1| flagellar basal-body rod protein flgg (distal rod protein)
           [Ralstonia solanacearum MolK2]
 gi|206593117|emb|CAQ60023.1| flagellar basal-body rod protein flgg (distal rod protein)
           [Ralstonia solanacearum IPO1609]
 gi|299073639|emb|CBJ53159.1| FlgG: Flagellar basal-body rod protein [Ralstonia solanacearum
           CFBP2957]
          Length = 260

 Score = 60.3 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 15/95 (15%), Positives = 31/95 (32%)

Query: 37  DTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVN 96
           ++     ++         +   G     +     +  +               V+  NVN
Sbjct: 166 NSTQVGTFQLANFINPAGLRSMGENLYAETEASGTANLAAPGANGVGVLNQNYVETSNVN 225

Query: 97  VLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           V+ E  +M +T R Y  N + ++ S  M+     L
Sbjct: 226 VVEEMVNMIQTQRAYEINSKAVQTSDQMLEKLAQL 260



 Score = 41.4 bits (95), Expect = 0.042,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 23/41 (56%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I S  I+ +G+  Q +++ +IS N+AN  TTG       +
Sbjct: 1  MIRSLWISKTGMDAQQSQLDVISNNLANVNTTGFKRSRAVF 41


>gi|238923133|ref|YP_002936646.1| flagellar basal body and hook protein [Eubacterium rectale ATCC
           33656]
 gi|238874805|gb|ACR74512.1| flagellar basal body and hook protein [Eubacterium rectale ATCC
           33656]
          Length = 272

 Score = 59.9 bits (143), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 16/87 (18%), Positives = 32/87 (36%), Gaps = 1/87 (1%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANA-SGIVKYPNVNVLVETADMRE 106
             +    +    G  +       +  +E  +P    +   +G ++  NV V  E  ++  
Sbjct: 186 QFNNPSGLEKQSGSLLAATANSGNPMLEIANPALKSSKVVTGYLEGSNVQVADEMVNLIV 245

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
             R Y  N + I  +  M+ T  +L R
Sbjct: 246 AQRAYELNSKAITTADSMLETANNLRR 272



 Score = 39.9 bits (91), Expect = 0.12,   Method: Composition-based stats.
 Identities = 12/64 (18%), Positives = 27/64 (42%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ + + A +G+  +   +  I+ N++N  TTG       ++       +    SG    
Sbjct: 1  MMRALYTAATGMRAEQTNVDTIANNLSNVNTTGFKGQRTEFKSLLYQTIQTRSTSGNGDA 60

Query: 64 KKIG 67
          K +G
Sbjct: 61 KPVG 64


>gi|149375032|ref|ZP_01892805.1| Flagellar basal body rod protein [Marinobacter algicola DG893]
 gi|149360921|gb|EDM49372.1| Flagellar basal body rod protein [Marinobacter algicola DG893]
          Length = 262

 Score = 59.9 bits (143), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 20/130 (15%), Positives = 39/130 (30%), Gaps = 4/130 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           L  + ++  +   +   +   +S   A                      + +   G    
Sbjct: 136 LEPNINVPENATNITIGKDGTVS---AVTDDQAAPVNLGEITLVDFINPQGLQAIGNNLF 192

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
           K           E   G       G+V+  NV V+ E  +M  T R Y  N + +  +  
Sbjct: 193 KATNASGDPAEGEPGIGGLGTLEQGMVEASNVEVVEELVNMITTQRAYEMNSKVVSATDQ 252

Query: 124 MMT-TTLDLL 132
           M+   T ++ 
Sbjct: 253 MLQFITNNIG 262



 Score = 42.6 bits (98), Expect = 0.018,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 21/42 (50%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          +  +  ++ +GL+ Q   M  IS N+AN  TTG       ++
Sbjct: 1  MHPALWVSKTGLSAQDTNMSTISNNLANVNTTGFKRDRAVFQ 42


>gi|148269402|ref|YP_001243862.1| hypothetical protein Tpet_0257 [Thermotoga petrophila RKU-1]
 gi|147734946|gb|ABQ46286.1| protein of unknown function DUF1078 domain protein [Thermotoga
           petrophila RKU-1]
          Length = 623

 Score = 59.9 bits (143), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 22/47 (46%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NV++  E   M    R + AN + I  +  ++   +++ R
Sbjct: 577 PGALEMSNVDLAEEFTKMIVAQRGFQANARVITTADQILNELVNIKR 623


>gi|94986792|ref|YP_594725.1| flagellar hook protein FlgE [Lawsonia intracellularis PHE/MN1-00]
 gi|94731041|emb|CAJ54404.1| Flagellar hook protein FlgE [Lawsonia intracellularis PHE/MN1-00]
          Length = 502

 Score = 59.9 bits (143), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 12/86 (13%), Positives = 29/86 (33%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
             + E+ +   G                     +    +   ++  NV++  E  +M   
Sbjct: 417 RFTSEDGLRREGNNHYSATLDSGGPEFGLPGTSNYGKLSVNQLETSNVDMSREMVNMIII 476

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R +  N +++  +  M+   L+L R
Sbjct: 477 QRGFQMNSKSVTTADTMLQKALELKR 502



 Score = 41.0 bits (94), Expect = 0.051,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 20/42 (47%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S  I  +G+   S  +  +S NIANA T G       ++
Sbjct: 1  MMGSLFIGATGMKTHSTGLGTVSNNIANANTIGYKQQQVVFQ 42


>gi|220934396|ref|YP_002513295.1| flagellar basal-body rod protein FlgG [Thioalkalivibrio sp.
           HL-EbGR7]
 gi|219995706|gb|ACL72308.1| flagellar basal-body rod protein FlgG [Thioalkalivibrio sp.
           HL-EbGR7]
          Length = 263

 Score = 59.9 bits (143), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 22/129 (17%), Positives = 36/129 (27%), Gaps = 4/129 (3%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
               I    L+V  A    +S   A              +         +   G     +
Sbjct: 138 PGIVIPEGALSVTVAEDGTVS---ATVAGNVAPIVVGNLQLADFINPAGLQPIGQNLFIE 194

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
                +                G ++  NVN + E  +M ET R Y  N + I  +  M+
Sbjct: 195 TAASGAPQAGNPGLDGRGRLLQGFLESSNVNTVEELVNMIETQRAYEMNSKAISTADQML 254

Query: 126 TTT-LDLLR 133
                +L R
Sbjct: 255 QYVNNNLGR 263



 Score = 46.4 bits (108), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/108 (20%), Positives = 35/108 (32%), Gaps = 6/108 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +  +  IA +GL  Q  RM +IS N+AN  TTG   G   ++      + +         
Sbjct: 1   MNKALWIAKTGLDAQQTRMSVISNNLANVNTTGFKKGRAVFQ------DLIYQTVRQAGA 54

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
           +     +         G        +    NV       DM    R +
Sbjct: 55  QAAQDTELPSGLMLGTGVRTVATEKMFTQGNVTQTENALDMAIEGRGF 102


>gi|302338085|ref|YP_003803291.1| fagellar hook-basal body protein [Spirochaeta smaragdinae DSM
           11293]
 gi|301635270|gb|ADK80697.1| fagellar hook-basal body protein [Spirochaeta smaragdinae DSM
           11293]
          Length = 460

 Score = 59.9 bits (143), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 15/44 (34%), Positives = 23/44 (52%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  NV++  +  DM  T R + AN +TI  S  M+   L L R
Sbjct: 417 LEMSNVDLAEQFTDMIVTQRGFQANSRTITTSDQMLQELLTLKR 460



 Score = 36.8 bits (83), Expect = 0.94,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 19/41 (46%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          + S +   SGL     RM +I  NI+N  T G   G   ++
Sbjct: 1  MRSLYAGVSGLQNHQTRMDVIGNNISNVNTVGFKKGRVNFQ 41


>gi|300693340|ref|YP_003749313.1| flgg: flagellar basal-body rod protein [Ralstonia solanacearum
           PSI07]
 gi|299075377|emb|CBJ34672.1| FlgG: Flagellar basal-body rod protein [Ralstonia solanacearum
           PSI07]
          Length = 260

 Score = 59.9 bits (143), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 15/95 (15%), Positives = 31/95 (32%)

Query: 37  DTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVN 96
           ++     ++         +   G     +     +  +               V+  NVN
Sbjct: 166 NSTQVGTFQLANFINPAGLRSMGENLYAETEASGTANLAAPGANGIGVLNQNYVETSNVN 225

Query: 97  VLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           V+ E  +M +T R Y  N + ++ S  M+     L
Sbjct: 226 VVEEMVNMIQTQRAYEINSKAVQTSDQMLEKLAQL 260



 Score = 41.4 bits (95), Expect = 0.043,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 23/41 (56%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I S  I+ +G+  Q +++ +IS N+AN  TTG       +
Sbjct: 1  MIRSLWISKTGMDAQQSQLDVISNNLANVNTTGFKRSRAVF 41


>gi|39995527|ref|NP_951478.1| flagellar hook protein FlgE [Geobacter sulfurreducens PCA]
 gi|39982290|gb|AAR33751.1| flagellar hook protein FlgE [Geobacter sulfurreducens PCA]
 gi|298504527|gb|ADI83250.1| flagellar hook protein FlgE [Geobacter sulfurreducens KN400]
          Length = 419

 Score = 59.9 bits (143), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 17/86 (19%), Positives = 32/86 (37%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
             S    +  +GG   ++          +          +  ++  NV++  +   M  T
Sbjct: 334 KFSSTAGLSKAGGTLFEETLESGQPLFSDASTPGVGKILANSLEQSNVDMAAQFVKMITT 393

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y AN +TI  + +M+   L L R
Sbjct: 394 QRGYSANSKTITTADEMLQEVLSLKR 419



 Score = 34.8 bits (78), Expect = 3.6,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 17/40 (42%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGS 41
            + ++ +   SGL      M +I  NI+N  T G   G 
Sbjct: 1  MSVTSALYTGISGLNANGEAMSVIGNNISNVNTIGFKQGR 40


>gi|290474974|ref|YP_003467858.1| flagellar basal body rod cell-distal protein [Xenorhabdus bovienii
           SS-2004]
 gi|289174291|emb|CBJ81081.1| flagellar biosynthesis; cell-distal portion of basal-body rod
           [Xenorhabdus bovienii SS-2004]
          Length = 260

 Score = 59.9 bits (143), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 23/127 (18%), Positives = 38/127 (29%), Gaps = 3/127 (2%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           + +  I ++   +  AR  I+S N+                  T   E  +   G     
Sbjct: 137 VPAIIIPDNATKMSIARDGIVSINVQGQNAPQQVGQLT---LTTFINESGLESIGENLYL 193

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           +                      G V+  NVNV  E  +M +  R Y  N + +  S  M
Sbjct: 194 ETNSSGVPVENAPGINGAGLLYQGYVETSNVNVAEELVNMIQVQRAYEINSKAVSTSDQM 253

Query: 125 MTTTLDL 131
           +     L
Sbjct: 254 LQKLTQL 260



 Score = 43.3 bits (100), Expect = 0.011,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 20/41 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I S  IA +GL  Q   M +I+ N+AN  T G       +
Sbjct: 1  MIRSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVF 41


>gi|264676572|ref|YP_003276478.1| flagellar basal-body rod protein FlgG [Comamonas testosteroni
           CNB-2]
 gi|299531284|ref|ZP_07044694.1| flagellar basal-body rod protein FlgG [Comamonas testosteroni S44]
 gi|262207084|gb|ACY31182.1| flagellar basal-body rod protein FlgG [Comamonas testosteroni
           CNB-2]
 gi|298720691|gb|EFI61638.1| flagellar basal-body rod protein FlgG [Comamonas testosteroni S44]
          Length = 260

 Score = 59.9 bits (143), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 19/129 (14%), Positives = 33/129 (25%), Gaps = 3/129 (2%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            +     I      V  +   ++S  +                         +   G   
Sbjct: 135 PVANGITIPQGATKVSISHDGVVSVTM---PGQAAPQQVGNIAMSQFINAAGLEPRGQNL 191

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
             +                      G ++  NVNV+ E   M +T R Y  N + I+ S 
Sbjct: 192 YVETASSGQPQQGTPGTNGLGTIQQGYLEASNVNVVQELVTMIQTQRAYEMNSKAIQTSD 251

Query: 123 DMMTTTLDL 131
            M+     L
Sbjct: 252 QMLAKLAQL 260



 Score = 41.0 bits (94), Expect = 0.060,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 23/41 (56%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I S  IA +G+  Q  ++ +IS N+AN  TTG    +  +
Sbjct: 1  MINSLFIAKTGMEAQQTQLDVISHNLANVSTTGYKRANAVF 41


>gi|167568109|ref|ZP_02361025.1| flagellar basal body rod protein FlgG [Burkholderia oklahomensis
           EO147]
 gi|167574227|ref|ZP_02367101.1| flagellar basal body rod protein FlgG [Burkholderia oklahomensis
           C6786]
          Length = 262

 Score = 59.9 bits (143), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 19/86 (22%), Positives = 30/86 (34%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
           T      +   G     +        V +           G V+  NVNV+ E  +M +T
Sbjct: 177 TFINPAGLDAKGENLFAETTSSGQPNVSQPGLNGAGTLKQGYVEASNVNVVQELVNMIQT 236

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y  N + +  S  M+ T   + R
Sbjct: 237 QRAYEINSKAVTTSDQMLQTVTQMSR 262



 Score = 41.0 bits (94), Expect = 0.059,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 22/41 (53%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  S +IA +G+  Q ++M +IS N+AN  T G       +
Sbjct: 1  MNRSLYIAATGMNAQQSQMDVISNNLANVSTNGFKGSRAVF 41


>gi|330953727|gb|EGH53987.1| flagellar basal body rod protein FlgG [Pseudomonas syringae Cit 7]
          Length = 148

 Score = 59.9 bits (143), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 19/128 (14%), Positives = 39/128 (30%), Gaps = 2/128 (1%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            L  +  +  +       +   +S  +A A  T    G+   +         +   GG  
Sbjct: 21  ALEPAIVVPQNAQTFTVGQDGTVSVTLAGATATPQIIGN--IQTADFINPAGLQAIGGNL 78

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
             + G   +  +               ++  NV+ + E  +M  T R Y  N + I  + 
Sbjct: 79  YLETGSSGAPQIGTPGLNGLGPTLQNTLENSNVSTVEELVNMITTQRAYEMNSKVISTAD 138

Query: 123 DMMTTTLD 130
            M+     
Sbjct: 139 QMLQNLTQ 146


>gi|289548898|ref|YP_003473886.1| flagellar basal-body rod protein FlgG [Thermocrinis albus DSM
           14484]
 gi|289182515|gb|ADC89759.1| flagellar basal-body rod protein FlgG [Thermocrinis albus DSM
           14484]
          Length = 262

 Score = 59.9 bits (143), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 16/131 (12%), Positives = 36/131 (27%), Gaps = 3/131 (2%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            L     +    ++V       +S      +                     +   G   
Sbjct: 135 PLDPEITVPADAISVSIGPDGTVS---VLRQGATTVEEIGRIELAKFVNPAGLRRIGNNL 191

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
             +        V+            G ++  NVN++ E  ++    R +  N + I  + 
Sbjct: 192 FIQTDASGEPIVDNPGNQGLGTLLQGYLESSNVNIVEEMVNLIIAQRAFEFNSKGIMAAD 251

Query: 123 DMMTTTLDLLR 133
           DM+    +L +
Sbjct: 252 DMLGQVANLRK 262



 Score = 48.3 bits (113), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 20/42 (47%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          +  +   + SG++ Q   + +IS N+AN  T G       ++
Sbjct: 1  MFRALWTSASGMSAQQTNLDVISHNMANVNTVGFKKMRPTFQ 42


>gi|288940409|ref|YP_003442649.1| fagellar hook-basal body protein [Allochromatium vinosum DSM 180]
 gi|288895781|gb|ADC61617.1| fagellar hook-basal body protein [Allochromatium vinosum DSM 180]
          Length = 436

 Score = 59.9 bits (143), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 14/42 (33%), Positives = 22/42 (52%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           ++  NV++  E  +M    R Y AN +TI  S  M  T L++
Sbjct: 394 LENSNVDLSQELVNMITAQRNYEANAKTISTSDQMTQTILNI 435


>gi|167628969|ref|YP_001679468.1| flagellar basal-body rod protein flgg, putative [Heliobacterium
           modesticaldum Ice1]
 gi|167591709|gb|ABZ83457.1| flagellar basal-body rod protein flgg, putative [Heliobacterium
           modesticaldum Ice1]
          Length = 258

 Score = 59.9 bits (143), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 15/86 (17%), Positives = 29/86 (33%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
           T      ++  G   + +          +         A   ++  NV V+ E   M   
Sbjct: 173 TFPNPAGLNREGRNLLTQSEASGEAIGGDAGADGRGRIAQRYLESSNVQVVDEMVAMITA 232

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y  N + I+ + +M+    +L R
Sbjct: 233 QRAYEVNTKAIQTADEMLGQANNLKR 258



 Score = 41.8 bits (96), Expect = 0.032,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 20/42 (47%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ + + + +G+  Q   M  IS N+AN  T G       ++
Sbjct: 1  MMRALYSSATGMIAQQLNMDTISNNLANVNTNGYKKSRAEFQ 42


>gi|145297456|ref|YP_001140297.1| lateral flagellar basal-body rod protein LfgG [Aeromonas
           salmonicida subsp. salmonicida A449]
 gi|142850228|gb|ABO88549.1| lateral flagellar basal-body rod protein LfgG [Aeromonas
           salmonicida subsp. salmonicida A449]
          Length = 261

 Score = 59.9 bits (143), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 20/123 (16%), Positives = 36/123 (29%), Gaps = 3/123 (2%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            ++    I ++   V       +S   A      +            +    +   GG  
Sbjct: 135 PMLPQIQIPDNATKVSIGTDGTVS---ATLPGQQENVELGRITLTNFTNPAGLEALGGNL 191

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
            +  G                A     ++  NVNV+ E  DM  T R Y  N + +  + 
Sbjct: 192 YRATGASGEAIEGVPGEEAMGAIKQFTLESSNVNVVEEMVDMITTQRAYEMNAKVVSAAD 251

Query: 123 DMM 125
            M+
Sbjct: 252 QML 254



 Score = 39.9 bits (91), Expect = 0.12,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 22/41 (53%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          + A+  ++ +GL+ Q A+M  IS N+AN  T G       +
Sbjct: 1  MHAALWVSKTGLSAQDAKMASISNNLANVNTVGFKRDRVAF 41


>gi|327441046|dbj|BAK17411.1| flagellar basal body rod protein [Solibacillus silvestris StLB046]
          Length = 329

 Score = 59.9 bits (143), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 20/132 (15%), Positives = 48/132 (36%), Gaps = 8/132 (6%)

Query: 10  IANSGLAVQSARMQIISENIAN--------ARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
           IA  G      R+   +++++           + GD   +        +    +  +G  
Sbjct: 198 IAQGGTTPSPIRIPTTAQSMSISQDGSISFVDSAGDLQYAGTIVLAKFANSGGLEKTGSN 257

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
             +      + + +        +  SG ++  NV++  E  +M    R + AN + I  S
Sbjct: 258 YFQTTPNSGAIYAQLATQDGIGSINSGFMEMSNVDLSEEFTEMIVAQRGFQANSRIITTS 317

Query: 122 HDMMTTTLDLLR 133
            +++   ++L R
Sbjct: 318 DEILQELVNLKR 329


>gi|170747256|ref|YP_001753516.1| flagellar basal-body rod protein FlgG [Methylobacterium
           radiotolerans JCM 2831]
 gi|170653778|gb|ACB22833.1| flagellar basal-body rod protein FlgG [Methylobacterium
           radiotolerans JCM 2831]
          Length = 263

 Score = 59.9 bits (143), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 15/119 (12%), Positives = 32/119 (26%)

Query: 16  AVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVE 75
              S  +       AN            ++      +  +   G     +          
Sbjct: 145 NATSVTISATGAVQANIPGQTAPQALGQFQLSRFVNKVGLESIGDNLFVETAASGQAISG 204

Query: 76  EFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
                         ++  NVN + E + +    R Y  N + +  +  M++TT  + R 
Sbjct: 205 LPGADGFGNLQQSYLEEANVNAVTEISSLIAAQRAYEMNSKVVTAADQMLSTTTQMFRS 263



 Score = 35.2 bits (79), Expect = 3.4,   Method: Composition-based stats.
 Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 7/70 (10%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          + + + A +G+A Q   +Q+IS NIAN RTTG       Y+R+ + F+++++ +      
Sbjct: 1  MRALYSAATGMAAQELNVQVISNNIANLRTTG-------YKRQQVHFQDLLYQNMRRAGA 53

Query: 65 KIGVDQSTFV 74
                +   
Sbjct: 54 STSQQNTQLP 63


>gi|254251193|ref|ZP_04944511.1| flagellar basal-body rod protein [Burkholderia dolosa AUO158]
 gi|124893802|gb|EAY67682.1| flagellar basal-body rod protein [Burkholderia dolosa AUO158]
          Length = 262

 Score = 59.9 bits (143), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 32/89 (35%)

Query: 45  RRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
           +  T      +   G     +     +  V +           G V+  NVNV+ E  +M
Sbjct: 174 QIATFINPAGLEAKGENLFAETTSSGAPNVSQPGLNGAGTLNQGYVEASNVNVVQELVNM 233

Query: 105 RETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            +T R Y  N + +  S  M+ T   + R
Sbjct: 234 IQTQRAYEINSKAVTTSDQMLQTVTQMSR 262



 Score = 40.6 bits (93), Expect = 0.080,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 22/41 (53%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  S +IA +G+  Q A+M +IS N+AN  T G       +
Sbjct: 1  MNRSLYIAATGMNAQQAQMDVISNNLANTSTNGFKASRAVF 41


>gi|17989431|ref|NP_542064.1| flagellar basal body rod protein FlgG [Brucella melitensis bv. 1
           str. 16M]
 gi|23499916|ref|NP_699356.1| flagellar basal body rod protein FlgG [Brucella suis 1330]
 gi|62317103|ref|YP_222956.1| flagellar basal body rod protein FlgG [Brucella abortus bv. 1 str.
           9-941]
 gi|83269095|ref|YP_418386.1| flagellar basal body rod protein FlgG [Brucella melitensis biovar
           Abortus 2308]
 gi|148557926|ref|YP_001257213.1| flagellar basal body rod protein FlgG [Brucella ovis ATCC 25840]
 gi|161620236|ref|YP_001594122.1| flagellar basal body rod protein FlgG [Brucella canis ATCC 23365]
 gi|163844346|ref|YP_001622001.1| flagellar basal body rod protein FlgG [Brucella suis ATCC 23445]
 gi|189022368|ref|YP_001932109.1| flagellar basal body rod protein FlgG [Brucella abortus S19]
 gi|225628625|ref|ZP_03786659.1| flagellar basal-body rod protein FlgG [Brucella ceti str. Cudo]
 gi|237816665|ref|ZP_04595657.1| flagellar basal-body rod protein FlgG [Brucella abortus str. 2308
           A]
 gi|254691412|ref|ZP_05154666.1| flagellar basal body rod protein FlgG [Brucella abortus bv. 6 str.
           870]
 gi|254695290|ref|ZP_05157118.1| flagellar basal body rod protein FlgG [Brucella abortus bv. 3 str.
           Tulya]
 gi|254702576|ref|ZP_05164404.1| flagellar basal body rod protein FlgG [Brucella suis bv. 3 str.
           686]
 gi|254706292|ref|ZP_05168120.1| flagellar basal body rod protein FlgG [Brucella pinnipedialis
           M163/99/10]
 gi|254711414|ref|ZP_05173225.1| flagellar basal body rod protein FlgG [Brucella pinnipedialis
           B2/94]
 gi|254720610|ref|ZP_05182421.1| flagellar basal body rod protein FlgG [Brucella sp. 83/13]
 gi|254731833|ref|ZP_05190411.1| flagellar basal body rod protein FlgG [Brucella abortus bv. 4 str.
           292]
 gi|256029956|ref|ZP_05443570.1| flagellar basal body rod protein FlgG [Brucella pinnipedialis
           M292/94/1]
 gi|256043073|ref|ZP_05446017.1| flagellar basal body rod protein FlgG [Brucella melitensis bv. 1
           str. Rev.1]
 gi|256059608|ref|ZP_05449806.1| flagellar basal body rod protein FlgG [Brucella neotomae 5K33]
 gi|256111943|ref|ZP_05452894.1| flagellar basal body rod protein FlgG [Brucella melitensis bv. 3
           str. Ether]
 gi|256158118|ref|ZP_05456036.1| flagellar basal body rod protein FlgG [Brucella ceti M490/95/1]
 gi|256252928|ref|ZP_05458464.1| flagellar basal body rod protein FlgG [Brucella ceti B1/94]
 gi|256256598|ref|ZP_05462134.1| flagellar basal body rod protein FlgG [Brucella abortus bv. 9 str.
           C68]
 gi|260544341|ref|ZP_05820162.1| flagellar basal body rod protein [Brucella abortus NCTC 8038]
 gi|260564303|ref|ZP_05834788.1| flagellar basal body rod protein [Brucella melitensis bv. 1 str.
           16M]
 gi|260568516|ref|ZP_05838985.1| flagellar basal body rod protein [Brucella suis bv. 4 str. 40]
 gi|260757026|ref|ZP_05869374.1| flagellar basal-body rod protein FlgG [Brucella abortus bv. 6 str.
           870]
 gi|260759602|ref|ZP_05871950.1| flagellar basal-body rod protein FlgG [Brucella abortus bv. 4 str.
           292]
 gi|260882836|ref|ZP_05894450.1| flagellar basal-body rod protein FlgG [Brucella abortus bv. 9 str.
           C68]
 gi|261215659|ref|ZP_05929940.1| flagellar basal-body rod protein FlgG [Brucella abortus bv. 3 str.
           Tulya]
 gi|261220019|ref|ZP_05934300.1| flagellar basal-body rod protein FlgG [Brucella ceti B1/94]
 gi|261313736|ref|ZP_05952933.1| flagellar basal-body rod protein FlgG [Brucella pinnipedialis
           M163/99/10]
 gi|261319022|ref|ZP_05958219.1| flagellar basal-body rod protein FlgG [Brucella pinnipedialis
           B2/94]
 gi|261323577|ref|ZP_05962774.1| flagellar basal-body rod protein FlgG [Brucella neotomae 5K33]
 gi|261753156|ref|ZP_05996865.1| flagellar basal-body rod protein FlgG [Brucella suis bv. 3 str.
           686]
 gi|265985650|ref|ZP_06098385.1| flagellar basal-body rod protein FlgG [Brucella sp. 83/13]
 gi|265986975|ref|ZP_06099532.1| flagellar basal-body rod protein FlgG [Brucella pinnipedialis
           M292/94/1]
 gi|265989511|ref|ZP_06102068.1| flagellar basal-body rod protein FlgG [Brucella melitensis bv. 1
           str. Rev.1]
 gi|265993390|ref|ZP_06105947.1| flagellar basal-body rod protein FlgG [Brucella melitensis bv. 3
           str. Ether]
 gi|265996635|ref|ZP_06109192.1| flagellar basal-body rod protein FlgG [Brucella ceti M490/95/1]
 gi|297249954|ref|ZP_06933655.1| flagellar basal-body rod protein FlgG [Brucella abortus bv. 5 str.
           B3196]
 gi|306838572|ref|ZP_07471409.1| flagellar basal-body rod protein FlgG [Brucella sp. NF 2653]
 gi|306841049|ref|ZP_07473773.1| flagellar basal-body rod protein FlgG [Brucella sp. BO2]
 gi|17985308|gb|AAL54328.1| flagellar basal-body rod protein flgg [Brucella melitensis bv. 1
           str. 16M]
 gi|23463493|gb|AAN33361.1| flagellar basal-body rod protein FlgG [Brucella suis 1330]
 gi|62197296|gb|AAX75595.1| flagellar basal-body rod protein FlgG [Brucella abortus bv. 1 str.
           9-941]
 gi|82939369|emb|CAJ12317.1| Flagellar basal body rod protein [Brucella melitensis biovar
           Abortus 2308]
 gi|148369211|gb|ABQ62083.1| flagellar basal-body rod protein FlgG [Brucella ovis ATCC 25840]
 gi|161337047|gb|ABX63351.1| flagellar basal-body rod protein FlgG [Brucella canis ATCC 23365]
 gi|163675069|gb|ABY39179.1| flagellar basal-body rod protein FlgG [Brucella suis ATCC 23445]
 gi|189020942|gb|ACD73663.1| Flagellar basal body rod protein [Brucella abortus S19]
 gi|225616471|gb|EEH13519.1| flagellar basal-body rod protein FlgG [Brucella ceti str. Cudo]
 gi|237787478|gb|EEP61694.1| flagellar basal-body rod protein FlgG [Brucella abortus str. 2308
           A]
 gi|260097612|gb|EEW81486.1| flagellar basal body rod protein [Brucella abortus NCTC 8038]
 gi|260151946|gb|EEW87039.1| flagellar basal body rod protein [Brucella melitensis bv. 1 str.
           16M]
 gi|260155181|gb|EEW90262.1| flagellar basal body rod protein [Brucella suis bv. 4 str. 40]
 gi|260669920|gb|EEX56860.1| flagellar basal-body rod protein FlgG [Brucella abortus bv. 4 str.
           292]
 gi|260677134|gb|EEX63955.1| flagellar basal-body rod protein FlgG [Brucella abortus bv. 6 str.
           870]
 gi|260872364|gb|EEX79433.1| flagellar basal-body rod protein FlgG [Brucella abortus bv. 9 str.
           C68]
 gi|260917266|gb|EEX84127.1| flagellar basal-body rod protein FlgG [Brucella abortus bv. 3 str.
           Tulya]
 gi|260918603|gb|EEX85256.1| flagellar basal-body rod protein FlgG [Brucella ceti B1/94]
 gi|261298245|gb|EEY01742.1| flagellar basal-body rod protein FlgG [Brucella pinnipedialis
           B2/94]
 gi|261299557|gb|EEY03054.1| flagellar basal-body rod protein FlgG [Brucella neotomae 5K33]
 gi|261302762|gb|EEY06259.1| flagellar basal-body rod protein FlgG [Brucella pinnipedialis
           M163/99/10]
 gi|261742909|gb|EEY30835.1| flagellar basal-body rod protein FlgG [Brucella suis bv. 3 str.
           686]
 gi|262550932|gb|EEZ07093.1| flagellar basal-body rod protein FlgG [Brucella ceti M490/95/1]
 gi|262764260|gb|EEZ10292.1| flagellar basal-body rod protein FlgG [Brucella melitensis bv. 3
           str. Ether]
 gi|263000180|gb|EEZ12870.1| flagellar basal-body rod protein FlgG [Brucella melitensis bv. 1
           str. Rev.1]
 gi|264659172|gb|EEZ29433.1| flagellar basal-body rod protein FlgG [Brucella pinnipedialis
           M292/94/1]
 gi|264664242|gb|EEZ34503.1| flagellar basal-body rod protein FlgG [Brucella sp. 83/13]
 gi|297173823|gb|EFH33187.1| flagellar basal-body rod protein FlgG [Brucella abortus bv. 5 str.
           B3196]
 gi|306288938|gb|EFM60238.1| flagellar basal-body rod protein FlgG [Brucella sp. BO2]
 gi|306406358|gb|EFM62600.1| flagellar basal-body rod protein FlgG [Brucella sp. NF 2653]
          Length = 262

 Score = 59.9 bits (143), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 15/79 (18%), Positives = 29/79 (36%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            + E  +   GG   ++        V         +   G ++  NV+ + E  D+    
Sbjct: 178 FTNEAGLEPLGGNLYRETEASGGPLVGVPGDPGYGSIKQGYLEASNVDPVKEITDLITAQ 237

Query: 109 RLYMANLQTIKQSHDMMTT 127
           R Y  N + I+ + +M  T
Sbjct: 238 RAYEMNSKVIQAADEMAAT 256



 Score = 44.9 bits (104), Expect = 0.003,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 21/40 (52%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          + +  IA +G+  Q   +++I+ NIAN  TTG       +
Sbjct: 1  MKALTIAATGMNAQQLNLEVIANNIANINTTGFKRARAEF 40


>gi|330826757|ref|YP_004390060.1| flagellar basal-body rod protein FlgG [Alicycliphilus denitrificans
           K601]
 gi|329312129|gb|AEB86544.1| flagellar basal-body rod protein FlgG [Alicycliphilus denitrificans
           K601]
          Length = 260

 Score = 59.9 bits (143), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 20/129 (15%), Positives = 38/129 (29%), Gaps = 3/129 (2%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            +     +     ++  +   ++S  IA                 +      +   G   
Sbjct: 135 PVANGITVPQGATSISISETGVVSATIA---GNAQPQQLGQLAMSSFINAAGLQPVGQNM 191

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
            K+          +           G ++  NVNV+ E   M +T R Y  N + I+ S 
Sbjct: 192 YKESAASGPPQQGQPGTNGLGVIKQGFLETSNVNVVEELVTMIQTQRAYEMNSKAIQTSD 251

Query: 123 DMMTTTLDL 131
            M+     L
Sbjct: 252 QMLAKLSQL 260



 Score = 43.7 bits (101), Expect = 0.009,   Method: Composition-based stats.
 Identities = 15/41 (36%), Positives = 24/41 (58%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I S  IA +G++ Q  ++ +IS N+AN  TTG    S  +
Sbjct: 1  MINSLWIAKTGMSAQQTQLDVISHNLANVSTTGFKRNSAVF 41


>gi|329901230|ref|ZP_08272755.1| Flagellar hook protein flgE [Oxalobacteraceae bacterium IMCC9480]
 gi|327549162|gb|EGF33754.1| Flagellar hook protein flgE [Oxalobacteraceae bacterium IMCC9480]
          Length = 407

 Score = 59.9 bits (143), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 32/83 (38%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +    +   G     +        V   + G+     S  V+  NV++  E  +M    
Sbjct: 324 FTNPNGLQNLGNNVWSETAASGGPLVGTPNSGNLGVLQSSAVEDSNVDLTAELVNMITAQ 383

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y AN QTIK    ++ T ++L
Sbjct: 384 RFYQANAQTIKTQDQVLQTLVNL 406


>gi|294339841|emb|CAZ88204.1| Flagellar basal-body rod protein flgG (Distal rod protein)
           [Thiomonas sp. 3As]
          Length = 261

 Score = 59.9 bits (143), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 20/125 (16%), Positives = 38/125 (30%), Gaps = 3/125 (2%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
            +  I  S  +V       +S  +               +  +      +   G     +
Sbjct: 138 PTVTIPASAQSVTIGNDGTVSVTL---PGQAAPQQVGALQLASFVNPTGLQSIGDNLYLQ 194

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
            G   +    +       +   G ++  NVNV+ E  DM  T R Y  N + +  S  M+
Sbjct: 195 TGSSGAPNTGQPTLNGLGSVRQGYLESSNVNVVAELVDMISTQRAYEVNSKAVTASDQML 254

Query: 126 TTTLD 130
               +
Sbjct: 255 QYVNN 259



 Score = 42.9 bits (99), Expect = 0.015,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 24/42 (57%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          +I S ++A +GL  +  RM +I+ N+AN  T+G       ++
Sbjct: 1  MIRSLYVAKTGLEAEQTRMDVIANNLANVNTSGFKGSRAVFQ 42


>gi|330818583|ref|YP_004362288.1| flagellar basal-body rod protein FlgG [Burkholderia gladioli BSR3]
 gi|327370976|gb|AEA62332.1| flagellar basal-body rod protein FlgG [Burkholderia gladioli BSR3]
          Length = 262

 Score = 59.9 bits (143), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 21/117 (17%), Positives = 36/117 (30%)

Query: 16  AVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVE 75
             QS  +            + +       +  T    E +   G     +        V 
Sbjct: 145 NAQSLTIGTDGVVTVTQPGSTNAVQIGAMQIATFINPEGLQALGQNLFAETTSSGVPNVT 204

Query: 76  EFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
                   +   G V+  NVNV+ E  +M +T R Y  N + +  S  M+ T   + 
Sbjct: 205 TPGLNGAGSLNQGYVESSNVNVVQELVNMIQTQRAYEINSKAVTTSDQMLQTVTQMK 261



 Score = 41.4 bits (95), Expect = 0.044,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 22/41 (53%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  S +IA +G+  Q A+M +IS N+AN  T G       +
Sbjct: 1  MNRSLYIAATGMNAQQAQMDVISNNLANVSTNGFKGSRAVF 41


>gi|296135671|ref|YP_003642913.1| flagellar basal-body rod protein FlgG [Thiomonas intermedia K12]
 gi|295795793|gb|ADG30583.1| flagellar basal-body rod protein FlgG [Thiomonas intermedia K12]
          Length = 261

 Score = 59.9 bits (143), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 20/125 (16%), Positives = 38/125 (30%), Gaps = 3/125 (2%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
            +  I  S  +V       +S  +               +  +      +   G     +
Sbjct: 138 PTVTIPASAQSVTIGNDGTVSVTL---PGQAAPQQVGALQLASFVNPTGLQSIGDNLYLQ 194

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
            G   +    +       +   G ++  NVNV+ E  DM  T R Y  N + +  S  M+
Sbjct: 195 TGSSGAPNTGQPTLNGLGSVQQGYLESSNVNVVAELVDMISTQRAYEVNSKAVTASDQML 254

Query: 126 TTTLD 130
               +
Sbjct: 255 QYVNN 259



 Score = 42.9 bits (99), Expect = 0.015,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 24/42 (57%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          +I S ++A +GL  +  RM +I+ N+AN  T+G       ++
Sbjct: 1  MIRSLYVAKTGLEAEQTRMDVIANNLANVNTSGFKGSRAVFQ 42


>gi|227876747|ref|ZP_03994856.1| flagellar hook protein [Mobiluncus mulieris ATCC 35243]
 gi|306817694|ref|ZP_07451436.1| flagellar hook protein FlgE [Mobiluncus mulieris ATCC 35239]
 gi|227842644|gb|EEJ52844.1| flagellar hook protein [Mobiluncus mulieris ATCC 35243]
 gi|304649508|gb|EFM46791.1| flagellar hook protein FlgE [Mobiluncus mulieris ATCC 35239]
          Length = 466

 Score = 59.9 bits (143), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 17/100 (17%), Positives = 38/100 (38%)

Query: 34  TTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
           + G +         + S    +  +G     + G      + E   G   A   G ++  
Sbjct: 367 SNGSSRALAKIATASFSNPLGLEKAGASYFVESGNSGQPQIGEPGSGTRGAMTGGAIEMS 426

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           NV++  E  ++  + R + AN + I  S +++   + + R
Sbjct: 427 NVDLAAEFTNLILSQRGFQANTRVITTSDEILQELVSMKR 466



 Score = 37.5 bits (85), Expect = 0.61,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 29/69 (42%), Gaps = 5/69 (7%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY-----RRKTISFEEVMHGS 58
          ++ S     SGL+V    + + S NIAN  TTG    S  +     +         ++  
Sbjct: 1  MLRSLFTGISGLSVHQTMLDVTSNNIANVNTTGFKSASTRFEDTFSQLVRSGAAPRLNER 60

Query: 59 GGVRVKKIG 67
          GG+   ++G
Sbjct: 61 GGMNPAQVG 69


>gi|85859196|ref|YP_461398.1| flagellar basal-body rod protein [Syntrophus aciditrophicus SB]
 gi|85722287|gb|ABC77230.1| flagellar basal-body rod protein [Syntrophus aciditrophicus SB]
          Length = 260

 Score = 59.9 bits (143), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 17/102 (16%), Positives = 33/102 (32%)

Query: 32  ARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVK 91
           A   G+T  +             +   G    +K                    +   ++
Sbjct: 159 ADENGNTLATGRIELAKFINPAGLSSIGRNLFEKTEGSGEPLTGNPGEDGLGTTSQRFLE 218

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             NVNV+ E   M    R Y  N ++I  + +M++   +L +
Sbjct: 219 MSNVNVIDEMVKMIVGQRAYEINSKSIVTADNMLSMINNLKK 260



 Score = 43.7 bits (101), Expect = 0.009,   Method: Composition-based stats.
 Identities = 11/91 (12%), Positives = 26/91 (28%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I S   A +G+  Q     +++ N+AN  T G       ++                  
Sbjct: 1  MIRSLWTAATGMQAQQVEQDVVANNLANVNTVGFKKSRADFQDLMYQLSTKAGSETSSGN 60

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIVKYPN 94
          +     +     +      + +     +  N
Sbjct: 61 QLTVGIEIGMGVKPVATQKIFSQGDYQQTGN 91


>gi|302037613|ref|YP_003797935.1| flagellar hook protein FlgE [Candidatus Nitrospira defluvii]
 gi|300605677|emb|CBK42010.1| Flagellar hook protein FlgE [Candidatus Nitrospira defluvii]
          Length = 407

 Score = 59.9 bits (143), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 18/86 (20%), Positives = 32/86 (37%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
             +  + +   G     +     +               SG V+  NV++  E  DM  T
Sbjct: 322 RFTNPDGLVNVGDNHFLETVESGAALAGAPTINGLGRVLSGTVEQSNVDLGKEFVDMIIT 381

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R + AN + I  S +M+   ++L R
Sbjct: 382 QRAFQANSRAITTSDEMLQELVNLKR 407


>gi|254500847|ref|ZP_05112998.1| flagellar basal-body rod protein FlgG [Labrenzia alexandrii DFL-11]
 gi|222436918|gb|EEE43597.1| flagellar basal-body rod protein FlgG [Labrenzia alexandrii DFL-11]
          Length = 260

 Score = 59.9 bits (143), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 15/100 (15%), Positives = 32/100 (32%)

Query: 32  ARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVK 91
               G T      +      +  +   G     +     +      +     +     ++
Sbjct: 160 VDEAGATVDLGQIQLARFVNKAGLEAIGDNLFLETDASGAPQTGNPNEDGYGSTQQFFLE 219

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             NV+ + E AD+    R Y  N + I+ +  M +TT  +
Sbjct: 220 MANVDAVTEIADLISAQRAYEMNSKVIQAADQMYSTTTQI 259



 Score = 36.4 bits (82), Expect = 1.3,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 23/41 (56%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          + + + A +G+  Q   +++IS N+AN RTTG       ++
Sbjct: 1  MRALYTAATGMKAQEYNVEVISNNVANMRTTGYKKQRADFQ 41


>gi|32490792|ref|NP_871046.1| flagellar basal body rod protein FlgG [Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis]
 gi|25165998|dbj|BAC24189.1| flgG [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 260

 Score = 59.9 bits (143), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 27/84 (32%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
           T      +  +G    K+     S            +     V+  NVN+  E   M +T
Sbjct: 177 TFINSSGLESAGESLYKETQSSGSPADNTPGMNGAGSLKQKFVENSNVNIAEELITMIQT 236

Query: 108 NRLYMANLQTIKQSHDMMTTTLDL 131
            R Y  N + I  S  M+     L
Sbjct: 237 QRAYELNSKVISTSDQMLQRLSQL 260



 Score = 40.2 bits (92), Expect = 0.11,   Method: Composition-based stats.
 Identities = 15/41 (36%), Positives = 20/41 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I S  IA +GL  Q   M +IS NI+N  T G       +
Sbjct: 1  MIRSLAIAKTGLEAQQINMDVISNNISNVSTNGFKRQKAIF 41


>gi|315186381|gb|EFU20141.1| fagellar hook-basal body protein [Spirochaeta thermophila DSM 6578]
          Length = 462

 Score = 59.9 bits (143), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 15/44 (34%), Positives = 22/44 (50%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  NV++     DM  T R + AN +TI  S  M+   L L R
Sbjct: 419 LEMSNVDLAEAFTDMIVTQRGFQANSRTITTSDQMLQELLTLKR 462



 Score = 39.5 bits (90), Expect = 0.17,   Method: Composition-based stats.
 Identities = 14/42 (33%), Positives = 20/42 (47%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S +   SGL     RM +I  NI+N  TTG   G   + 
Sbjct: 1  MMRSLYAGVSGLQNHQIRMDVIGNNISNVNTTGFKKGRVNFH 42


>gi|307718606|ref|YP_003874138.1| flagellar hook protein [Spirochaeta thermophila DSM 6192]
 gi|306532331|gb|ADN01865.1| flagellar hook protein [Spirochaeta thermophila DSM 6192]
          Length = 462

 Score = 59.9 bits (143), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 15/44 (34%), Positives = 22/44 (50%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  NV++     DM  T R + AN +TI  S  M+   L L R
Sbjct: 419 LEMSNVDLAEAFTDMIVTQRGFQANSRTITTSDQMLQELLTLKR 462



 Score = 39.5 bits (90), Expect = 0.17,   Method: Composition-based stats.
 Identities = 14/42 (33%), Positives = 20/42 (47%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S +   SGL     RM +I  NI+N  TTG   G   + 
Sbjct: 1  MMRSLYAGVSGLQNHQIRMDVIGNNISNVNTTGFKKGRVNFH 42


>gi|317152080|ref|YP_004120128.1| flagellar hook-basal body protein [Desulfovibrio aespoeensis
           Aspo-2]
 gi|316942331|gb|ADU61382.1| flagellar hook-basal body protein [Desulfovibrio aespoeensis
           Aspo-2]
          Length = 535

 Score = 59.9 bits (143), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 18/86 (20%), Positives = 32/86 (37%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
             + E  +   GG          +    +   G   +     ++  NV++  E A M  T
Sbjct: 450 RFASEWGLRRDGGNNFVATDASGAAMDGKALVGGRGSFVQNTLEMSNVDMAEEFASMIIT 509

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y AN + I  S  ++ T + + R
Sbjct: 510 QRGYQANTKVITTSDSLLNTLISVKR 535



 Score = 37.9 bits (86), Expect = 0.45,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 19/38 (50%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSD 42
           +S ++  +G+     RMQ+++ N+AN  T G      
Sbjct: 3  FSSLYVGATGVVAHGERMQVVANNLANVSTIGFKKADA 40


>gi|304310887|ref|YP_003810485.1| Flagellar basal-body rod protein [gamma proteobacterium HdN1]
 gi|301796620|emb|CBL44832.1| Flagellar basal-body rod protein [gamma proteobacterium HdN1]
          Length = 261

 Score = 59.9 bits (143), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 14/78 (17%), Positives = 26/78 (33%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +   G    ++     +    +             ++  NVNV+ E  +M ET 
Sbjct: 178 FVNPAGLESVGSNLYRETVASGAPTEAQPGTDGTGTLQQNALEASNVNVVEELVNMIETQ 237

Query: 109 RLYMANLQTIKQSHDMMT 126
           R Y  N + I     M++
Sbjct: 238 RAYEMNSKVISTVDQMLS 255



 Score = 44.9 bits (104), Expect = 0.004,   Method: Composition-based stats.
 Identities = 15/42 (35%), Positives = 23/42 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          + A+  I+ SGL+ Q  R+  IS N+AN  TTG       ++
Sbjct: 1  MNAALWISKSGLSAQDLRLSTISNNLANVSTTGFKRDIAVFQ 42


>gi|289523565|ref|ZP_06440419.1| flagellar hook protein FlgE [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
 gi|289503257|gb|EFD24421.1| flagellar hook protein FlgE [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
          Length = 618

 Score = 59.9 bits (143), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 36/111 (32%), Gaps = 2/111 (1%)

Query: 25  ISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVA 84
           I+ +        +   S  Y      F              I    S   +   P    A
Sbjct: 508 IASDGTVMGIYSNGRNSALYTLSLALFSNPSGLEKIGMTAFIPTANSGLPQVVTPKEGGA 567

Query: 85  NA--SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            +   G ++  NV++  E + +    R + AN + I  S  ++   ++L R
Sbjct: 568 GSLAGGNLEMANVDLAEEFSRLIIAQRGFQANARVITTSDQVLDELINLKR 618


>gi|206889889|ref|YP_002248123.1| flagellar hook protein FlgE [Thermodesulfovibrio yellowstonii DSM
           11347]
 gi|206741827|gb|ACI20884.1| flagellar hook protein FlgE [Thermodesulfovibrio yellowstonii DSM
           11347]
          Length = 434

 Score = 59.9 bits (143), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 24/44 (54%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  NV++  E   M    R Y AN++ I  + +M+   ++++R
Sbjct: 391 LEASNVDLAEEFIRMIAAQRAYQANVRVITTTDNMLNELMNIVR 434



 Score = 36.0 bits (81), Expect = 1.8,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 18/42 (42%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S     SGL      + +I +NIANA T G       + 
Sbjct: 1  MLTSLFTGISGLNANGLALSVIGDNIANANTVGFKASRANFA 42


>gi|218778868|ref|YP_002430186.1| hypothetical protein Dalk_1015 [Desulfatibacillum alkenivorans
           AK-01]
 gi|218760252|gb|ACL02718.1| Flagellar hook protein FlgE [Desulfatibacillum alkenivorans AK-01]
          Length = 693

 Score = 59.9 bits (143), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 14/86 (16%), Positives = 28/86 (32%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
             +  + +   G                +          S  ++  NV++  E   M  T
Sbjct: 608 KFNNVQGLQKMGQNMFAATRNSGDAITNKPGTNGLGTITSNSLEQSNVDLANEFVKMITT 667

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y AN + I  +  ++   ++L R
Sbjct: 668 QRGYQANSKVITVTDQLLQEVINLKR 693


>gi|317051987|ref|YP_004113103.1| flagellar basal body rod protein [Desulfurispirillum indicum S5]
 gi|316947071|gb|ADU66547.1| flagellar basal body rod protein [Desulfurispirillum indicum S5]
          Length = 129

 Score = 59.9 bits (143), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 25/134 (18%), Positives = 48/134 (35%), Gaps = 13/134 (9%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           ++ + + A S +     R    + N+AN  T G       ++ + +   E + G      
Sbjct: 1   MVDAFYNAASAIKTYGFRQSASAHNVANVNTDG-------FKSQRVDTAEGVSGGVRPTG 53

Query: 64  KKIGVDQSTFVEEFDPGHPVA------NASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
             I      F     P   V+        +G+V+  N ++  E  +         AN   
Sbjct: 54  VSIDKSHGPFRPSEFPADTVSFSADAIAMAGLVEGSNTDITREIVNSSVNQYSVSANTGV 113

Query: 118 IKQSHDMMTTTLDL 131
           I+   +M+ T LD+
Sbjct: 114 IRSQDEMIGTLLDI 127


>gi|78355345|ref|YP_386794.1| flagella basal body rod domain-containing protein [Desulfovibrio
           desulfuricans subsp. desulfuricans str. G20]
 gi|78217750|gb|ABB37099.1| flagella basal body rod domain protein [Desulfovibrio desulfuricans
           subsp. desulfuricans str. G20]
          Length = 501

 Score = 59.9 bits (143), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 13/79 (16%), Positives = 28/79 (35%)

Query: 55  MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
           +   GG                    +  + A+  ++  NV+   E  +M  T R + + 
Sbjct: 423 LRREGGNHFSATRESGEAQEGTAKTENFGSVAASTLEMSNVDASREFVNMIITQRGFQSQ 482

Query: 115 LQTIKQSHDMMTTTLDLLR 133
            + +  +  M+   L+L R
Sbjct: 483 SKVVTTADTMLQKALELKR 501



 Score = 34.8 bits (78), Expect = 3.7,   Method: Composition-based stats.
 Identities = 15/41 (36%), Positives = 21/41 (51%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          IAS +I  +G+   S  MQ+I  N+AN  T G       Y+
Sbjct: 3  IASLYIGATGMKTHSQGMQVIGNNLANINTVGFKQSMMLYQ 43


>gi|313673416|ref|YP_004051527.1| fagellar hook-basal body protein [Calditerrivibrio nitroreducens
           DSM 19672]
 gi|312940172|gb|ADR19364.1| fagellar hook-basal body protein [Calditerrivibrio nitroreducens
           DSM 19672]
          Length = 822

 Score = 59.9 bits (143), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 23/48 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            SG V+  NV++  E   M    R Y  N + I  S +M+   L+L R
Sbjct: 775 QSGAVENSNVDIAQEFVTMITVQRGYQTNSRVITTSDEMLQELLNLKR 822


>gi|218677554|ref|ZP_03525451.1| flagellar basal body rod protein FlgG [Rhizobium etli CIAT 894]
          Length = 205

 Score = 59.9 bits (143), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 26/78 (33%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
              E  +   G    ++        V   D         G ++  NV+ + E  ++    
Sbjct: 121 FVNEAGLQPIGDNLFQETAASGDAVVGNPDEEGFAYMKQGYLESSNVDPVKEITELISAQ 180

Query: 109 RLYMANLQTIKQSHDMMT 126
           R Y  N + I  + +M +
Sbjct: 181 RAYEMNSKVITTADEMAS 198


>gi|153011524|ref|YP_001372738.1| flagellar basal body rod protein FlgG [Ochrobactrum anthropi ATCC
           49188]
 gi|151563412|gb|ABS16909.1| flagellar basal-body rod protein FlgG [Ochrobactrum anthropi ATCC
           49188]
          Length = 262

 Score = 59.9 bits (143), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 15/79 (18%), Positives = 29/79 (36%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            + E  +   GG   ++        V         +   G ++  NV+ + E  D+    
Sbjct: 178 FTNEAGLEPLGGNLYRETEASGGPLVGVPGDPGYGSIKQGYLEASNVDPVKEITDLITAQ 237

Query: 109 RLYMANLQTIKQSHDMMTT 127
           R Y  N + I+ + +M  T
Sbjct: 238 RAYEMNSKVIQAADEMAAT 256



 Score = 44.9 bits (104), Expect = 0.004,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 21/40 (52%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          + +  IA +G+  Q   +++I+ NIAN  TTG       +
Sbjct: 1  MKALTIAATGMNAQQLNLEVIANNIANINTTGFKRARAEF 40


>gi|300693338|ref|YP_003749311.1| flagellar hook protein flge [Ralstonia solanacearum PSI07]
 gi|299075375|emb|CBJ34670.1| flagellar hook protein FlgE [Ralstonia solanacearum PSI07]
          Length = 401

 Score = 59.9 bits (143), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 19/87 (21%), Positives = 32/87 (36%)

Query: 45  RRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
                   + +   GG +  +     S  +     G      S  V+  NV++  E  +M
Sbjct: 314 AMTNFKAPDGLQNIGGNQWVETAESGSPQMGTPGMGSFGLLQSSAVEQSNVDLSAELVNM 373

Query: 105 RETNRLYMANLQTIKQSHDMMTTTLDL 131
               R Y AN QTIK    ++ T + +
Sbjct: 374 IVAQRSYQANAQTIKTEDQLLQTLVSM 400



 Score = 36.4 bits (82), Expect = 1.5,   Method: Composition-based stats.
 Identities = 22/113 (19%), Positives = 34/113 (30%), Gaps = 14/113 (12%)

Query: 7   SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY---RRKTISFEEVMHGSGGVRV 63
                 SGL   S  + +I  N+ANA T G    +  +     +++          GV V
Sbjct: 2   GFQQGLSGLDAASKNLDVIGSNVANANTVGYKKSTAEFGDVYARSLVGASDNQIGQGVDV 61

Query: 64  KKIGVD--QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
            K+     Q       +P     N +G  +           D       Y  N
Sbjct: 62  TKVSQSFTQGNVTVTGNPLDIAINGTGFYR---------MVDASSGQVSYTRN 105


>gi|269836573|ref|YP_003318801.1| hypothetical protein Sthe_0541 [Sphaerobacter thermophilus DSM
           20745]
 gi|269785836|gb|ACZ37979.1| protein of unknown function DUF1078 domain protein [Sphaerobacter
           thermophilus DSM 20745]
          Length = 413

 Score = 59.9 bits (143), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 24/46 (52%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  NV++  E  +M    R + AN + +  S +++   ++L R
Sbjct: 368 GYLEMSNVDLAEEFTNMILAERGFQANSRVVTTSDEVLQDLVNLKR 413



 Score = 38.3 bits (87), Expect = 0.33,   Method: Composition-based stats.
 Identities = 18/70 (25%), Positives = 25/70 (35%), Gaps = 6/70 (8%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDT------PGSDPYRRKTISFEEVMHG 57
          L  S   A SGL      + +I  NIAN  T G             +  +  S  +   G
Sbjct: 2  LNRSMASAVSGLKAYQTWLDVIGNNIANLATPGFKASRVRFEDVMSHTLRGASVPDPAQG 61

Query: 58 SGGVRVKKIG 67
           GG    ++G
Sbjct: 62 RGGRNPAQVG 71


>gi|256376465|ref|YP_003100125.1| hypothetical protein Amir_2339 [Actinosynnema mirum DSM 43827]
 gi|255920768|gb|ACU36279.1| protein of unknown function DUF1078 domain protein [Actinosynnema
           mirum DSM 43827]
          Length = 276

 Score = 59.9 bits (143), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 21/129 (16%), Positives = 42/129 (32%), Gaps = 13/129 (10%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
             S  ++  G          I   +AN    G             +    +  +GG   +
Sbjct: 161 YTSFSVSGDG---------TIVGVLAN----GTPRTVGQIAMANFANPGGLDKAGGSFYR 207

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
                    +         A  SG ++  NV++  E  ++    R + AN + I  S ++
Sbjct: 208 ATVNSGPVQIGGAGDNGTGAVVSGALEMSNVDLSQEFTNLIIAQRGFQANSKVITSSDEI 267

Query: 125 MTTTLDLLR 133
           +   ++L R
Sbjct: 268 LQDLMNLKR 276



 Score = 33.7 bits (75), Expect = 9.5,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 16/41 (39%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          ++ S     SGL      M +   NI+N  TTG       +
Sbjct: 1  MLRSLFSGISGLRAHQQMMDVTGNNISNVNTTGFKSSQTVF 41


>gi|291288379|ref|YP_003505195.1| flagellar basal-body rod protein FlgG [Denitrovibrio acetiphilus
           DSM 12809]
 gi|290885539|gb|ADD69239.1| flagellar basal-body rod protein FlgG [Denitrovibrio acetiphilus
           DSM 12809]
          Length = 262

 Score = 59.5 bits (142), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 13/86 (15%), Positives = 27/86 (31%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                  +   G       G   +            +     ++  NV+V+ E  +M   
Sbjct: 177 RFINPAGLKAIGKNLFMPTGASGNAVAGVPSEDGYGSITQNTLEMSNVSVVDEMVNMITG 236

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y  N + ++   +M+    +L R
Sbjct: 237 QRAYEINSKAVQTGDEMLQIVNNLKR 262



 Score = 45.2 bits (105), Expect = 0.003,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 15/39 (38%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSD 42
          +  +   A +G+  Q   +  IS N+AN    G      
Sbjct: 1  MFRTLWTAATGMTAQQTNIDTISNNLANVNNIGYKKSRA 39


>gi|219684180|ref|ZP_03539124.1| flagellar basal-body rod protein FlgG [Borrelia garinii PBr]
 gi|219672169|gb|EED29222.1| flagellar basal-body rod protein FlgG [Borrelia garinii PBr]
          Length = 265

 Score = 59.5 bits (142), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 16/86 (18%), Positives = 27/86 (31%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                  +   G    K+                      GI++  NV++  E   M   
Sbjct: 179 RFVNPAGLSAIGSNLFKETAGSGQEITGIPGSEGMGILRQGILEMSNVSIAEEMVTMIVA 238

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y  N + I+ S +M+    +L R
Sbjct: 239 QRAYEINSKAIQTSDNMLGIANNLKR 264



 Score = 41.4 bits (95), Expect = 0.042,   Method: Composition-based stats.
 Identities = 10/33 (30%), Positives = 18/33 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ +   A SG+  Q   +  I+ N++N  TTG
Sbjct: 1  MMRALWTAASGMTAQQYNVDTIANNLSNVNTTG 33


>gi|83747654|ref|ZP_00944690.1| FlgE [Ralstonia solanacearum UW551]
 gi|207728346|ref|YP_002256740.1| flagellar hook protein flge [Ralstonia solanacearum MolK2]
 gi|207739737|ref|YP_002258130.1| flagellar hook protein flge [Ralstonia solanacearum IPO1609]
 gi|83725706|gb|EAP72848.1| FlgE [Ralstonia solanacearum UW551]
 gi|206591592|emb|CAQ57204.1| flagellar hook protein flge [Ralstonia solanacearum MolK2]
 gi|206593119|emb|CAQ60025.1| flagellar hook protein flge [Ralstonia solanacearum IPO1609]
          Length = 401

 Score = 59.5 bits (142), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 19/87 (21%), Positives = 32/87 (36%)

Query: 45  RRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
                   + +   GG +  +     S  +     G      S  V+  NV++  E  +M
Sbjct: 314 AMTNFKAPDGLQNIGGNQWVETAESGSPQMGTPGMGSFGLLQSSAVEQSNVDLSAELVNM 373

Query: 105 RETNRLYMANLQTIKQSHDMMTTTLDL 131
               R Y AN QTIK    ++ T + +
Sbjct: 374 IVAQRSYQANAQTIKTEDQLLQTLVSM 400



 Score = 36.4 bits (82), Expect = 1.3,   Method: Composition-based stats.
 Identities = 22/113 (19%), Positives = 34/113 (30%), Gaps = 14/113 (12%)

Query: 7   SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY---RRKTISFEEVMHGSGGVRV 63
                 SGL   S  + +I  N+ANA T G    +  +     +++          GV V
Sbjct: 2   GFQQGLSGLDAASKNLDVIGSNVANANTVGYKKSTAEFGDVYARSLVGASDNQIGQGVDV 61

Query: 64  KKIGVD--QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
            K+     Q       +P     N +G  +           D       Y  N
Sbjct: 62  TKVSQSFTQGNVTVTGNPLDIAINGTGFYR---------MVDTSSGQVSYTRN 105


>gi|316932823|ref|YP_004107805.1| flagellar basal-body rod protein FlgG [Rhodopseudomonas palustris
           DX-1]
 gi|315600537|gb|ADU43072.1| flagellar basal-body rod protein FlgG [Rhodopseudomonas palustris
           DX-1]
          Length = 262

 Score = 59.5 bits (142), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 14/113 (12%), Positives = 35/113 (30%), Gaps = 3/113 (2%)

Query: 24  IISENIANARTTGDTPGSDPYRR---KTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPG 80
            ++ N   + T   +       +        +  +   G     +     +         
Sbjct: 150 TVATNGQVSVTISGSTTPTVLGQIGLTRFINKAGLQPQGDNLFVETPASGTPQDGIATAD 209

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
                    ++  NV V+ E +D+    R Y  N + +  +  M+ +T ++ R
Sbjct: 210 GLGDIMQKTLEQANVEVVTEISDLISAQRAYEMNAKVVSAADQMLQSTANMFR 262



 Score = 36.4 bits (82), Expect = 1.2,   Method: Composition-based stats.
 Identities = 15/41 (36%), Positives = 25/41 (60%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          + + + A +G+A Q   +Q+IS NIAN RTTG    +  ++
Sbjct: 1  MRALYTAATGMAAQELNVQVISNNIANMRTTGFKKQTAQFQ 41


>gi|260886211|ref|ZP_05897474.1| flagellar basal-body rod protein FlgG [Selenomonas sputigena ATCC
           35185]
 gi|330839793|ref|YP_004414373.1| flagellar basal-body rod protein FlgG [Selenomonas sputigena ATCC
           35185]
 gi|260863930|gb|EEX78430.1| flagellar basal-body rod protein FlgG [Selenomonas sputigena ATCC
           35185]
 gi|329747557|gb|AEC00914.1| flagellar basal-body rod protein FlgG [Selenomonas sputigena ATCC
           35185]
          Length = 263

 Score = 59.5 bits (142), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 15/86 (17%), Positives = 27/86 (31%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                  +   G    K+     +                G+V+  N+ ++ E  +M   
Sbjct: 178 RFVNPAGLFAIGKNLFKETDASGNAIDSNPGEEGAGTLTQGVVEMSNIQIVEEMVNMIVA 237

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y +N + I  S  M+     L R
Sbjct: 238 QRAYESNSKAITTSDSMLEIANSLKR 263



 Score = 44.5 bits (103), Expect = 0.005,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 21/57 (36%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          ++ +   A SG+  Q   M +++ NIAN  T G       ++              G
Sbjct: 1  MMRALWSAASGMKAQQDNMDVVAHNIANVNTFGSKKVRAEFQDLVYQNLRAAGAQSG 57


>gi|255322391|ref|ZP_05363537.1| flagellar basal-body rod protein FlgG [Campylobacter showae RM3277]
 gi|255300764|gb|EET80035.1| flagellar basal-body rod protein FlgG [Campylobacter showae RM3277]
          Length = 262

 Score = 59.5 bits (142), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 23/48 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             G V+  NV ++ E  D+    R Y AN + I  S DM++    L R
Sbjct: 215 RQGFVEMSNVQLVEEMTDLITGQRAYEANSKAITTSDDMLSIVNSLKR 262



 Score = 41.8 bits (96), Expect = 0.032,   Method: Composition-based stats.
 Identities = 14/91 (15%), Positives = 28/91 (30%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ S + A +G+  Q  ++ + S NIAN  T G       +        E    +     
Sbjct: 1  MMRSIYSAATGMIAQQTQIDVTSHNIANVNTIGYKKNRAEFADLMYQVMEYAGTATSATT 60

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIVKYPN 94
          K     +            + +     +  N
Sbjct: 61 KSPTGIEVGLGARPTAITKIFSQGYFKETSN 91


>gi|147678415|ref|YP_001212630.1| flagellar hook protein FlgE [Pelotomaculum thermopropionicum SI]
 gi|146274512|dbj|BAF60261.1| flagellar hook protein FlgE [Pelotomaculum thermopropionicum SI]
          Length = 269

 Score = 59.5 bits (142), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 18/60 (30%), Positives = 28/60 (46%)

Query: 74  VEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            +  + G      SG ++  NV++  E  +M  T R Y AN +TI  +  M+   L L R
Sbjct: 210 EKTPNSGGLGTINSGYLEMSNVDLTDEFTNMISTQRGYQANARTITVTDQMIEELLALKR 269



 Score = 39.9 bits (91), Expect = 0.12,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 19/42 (45%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S +   SGL     RM +I  NIAN  T G       ++
Sbjct: 1  MLRSLYAGASGLRSHQTRMDVIGNNIANVNTIGFKGSRANFQ 42


>gi|317406199|gb|EFV86448.1| flagellar basal-body rod protein FlgG [Achromobacter xylosoxidans
           C54]
          Length = 261

 Score = 59.5 bits (142), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 21/124 (16%), Positives = 41/124 (33%), Gaps = 2/124 (1%)

Query: 8   AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
            ++ ++ L++   +  I+S  +      G        +  T      +   G     +  
Sbjct: 140 MNVPDNALSISIGKDGIVS--VTQPGAAGVNVQIGQLQIATFINPTGLQSVGENLYLETD 197

Query: 68  VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
                 + +             V+  NVNV  E  +M  T R Y  N + +K S +M+  
Sbjct: 198 ASGPANLLQPGVDGAGTFMQNYVETSNVNVAEELVNMITTQRAYEMNSKAVKTSDEMLAR 257

Query: 128 TLDL 131
              L
Sbjct: 258 LTQL 261



 Score = 42.9 bits (99), Expect = 0.016,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 24/61 (39%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ S  IA +GL  Q   M +IS N+AN  T G   G   ++              G   
Sbjct: 1  MMRSLWIAKTGLEGQQTSMDVISNNLANVATNGFKRGRAVFQDLMYQTLRQPGAQVGDAT 60

Query: 64 K 64
          +
Sbjct: 61 Q 61


>gi|300696913|ref|YP_003747574.1| flagellar hook protein FlgE [Ralstonia solanacearum CFBP2957]
 gi|299073637|emb|CBJ53157.1| flagellar hook protein FlgE [Ralstonia solanacearum CFBP2957]
          Length = 401

 Score = 59.5 bits (142), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 19/87 (21%), Positives = 32/87 (36%)

Query: 45  RRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
                   + +   GG +  +     S  +     G      S  V+  NV++  E  +M
Sbjct: 314 AMTNFKAPDGLQNIGGNQWVETAESGSPQMGTPGMGSFGLLQSSAVEQSNVDLSAELVNM 373

Query: 105 RETNRLYMANLQTIKQSHDMMTTTLDL 131
               R Y AN QTIK    ++ T + +
Sbjct: 374 IVAQRSYQANAQTIKTEDQLLQTLVSM 400



 Score = 36.4 bits (82), Expect = 1.5,   Method: Composition-based stats.
 Identities = 22/113 (19%), Positives = 34/113 (30%), Gaps = 14/113 (12%)

Query: 7   SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY---RRKTISFEEVMHGSGGVRV 63
                 SGL   S  + +I  N+ANA T G    +  +     +++          GV V
Sbjct: 2   GFQQGLSGLDAASKNLDVIGSNVANANTVGYKKSTAEFGDVYARSLVGASDNQIGQGVDV 61

Query: 64  KKIGVD--QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
            K+     Q       +P     N +G  +           D       Y  N
Sbjct: 62  TKVSQSFTQGNVTVTGNPLDIAINGTGFYR---------MVDASSGQVSYTRN 105


>gi|293605005|ref|ZP_06687401.1| flagellar basal-body rod protein FlgG [Achromobacter piechaudii
           ATCC 43553]
 gi|292816610|gb|EFF75695.1| flagellar basal-body rod protein FlgG [Achromobacter piechaudii
           ATCC 43553]
          Length = 261

 Score = 59.5 bits (142), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 21/124 (16%), Positives = 42/124 (33%), Gaps = 2/124 (1%)

Query: 8   AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
            ++ ++ L++   +  I+S  +      G        +  T      +   G     +  
Sbjct: 140 MNVPDNALSISIGKDGIVS--VTQPGAAGVNVQIGQLQIATFINPTGLQSIGENLYLETD 197

Query: 68  VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
                 + +       +     V+  NVNV  E  +M  T R Y  N + +K S +M+  
Sbjct: 198 ASGPANLLQPGVDGAGSIMQNYVETSNVNVAEELVNMITTQRAYEMNSKAVKTSDEMLAR 257

Query: 128 TLDL 131
              L
Sbjct: 258 LTQL 261



 Score = 42.2 bits (97), Expect = 0.027,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 24/61 (39%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ S  IA +GL  Q   M +IS N+AN  T G   G   ++              G   
Sbjct: 1  MMRSLWIAKTGLEGQQTSMDVISNNLANVSTNGFKRGRAVFQDLMYQTLRQPGAQVGDAT 60

Query: 64 K 64
          +
Sbjct: 61 Q 61


>gi|170737040|ref|YP_001778300.1| flagellar basal-body rod protein FlgG [Burkholderia cenocepacia
           MC0-3]
 gi|169819228|gb|ACA93810.1| flagellar basal-body rod protein FlgG [Burkholderia cenocepacia
           MC0-3]
          Length = 261

 Score = 59.5 bits (142), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 20/113 (17%), Positives = 34/113 (30%), Gaps = 3/113 (2%)

Query: 24  IISENIANARTTG---DTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPG 80
            ISEN   + +TG           +         +   GG    +     +    E    
Sbjct: 149 TISENGTVSVSTGAGKTLAEVGQLQLAQFVNPAGLLALGGNLYAETVASGAPTESEPGQN 208

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
                  G ++  NV  + E  +M    R Y  N + +  + +MM       R
Sbjct: 209 GIGTIKQGALEGSNVLAVEEMVEMIAAQRTYEMNTKVLSAADNMMQYLSQAAR 261



 Score = 40.2 bits (92), Expect = 0.10,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 29/66 (43%), Gaps = 5/66 (7%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSD-----PYRRKTISFEEVMHGS 58
          +  +  I+ +G+  Q A++Q I+ N+AN  T G            YR +     +V   +
Sbjct: 1  MNHAMWISKTGIQAQDAKLQAIANNLANVNTVGFKRDRAVFEDMFYRAERQPGAQVSDNA 60

Query: 59 GGVRVK 64
           G  V+
Sbjct: 61 TGPGVQ 66


>gi|187478187|ref|YP_786211.1| flagellar basal body rod protein FlgG [Bordetella avium 197N]
 gi|115422773|emb|CAJ49301.1| flagellar basal-body rod protein [Bordetella avium 197N]
          Length = 261

 Score = 59.5 bits (142), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 41/124 (33%), Gaps = 2/124 (1%)

Query: 8   AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
            ++ ++ L++   +  ++S  +      G        +  T      +   G     +  
Sbjct: 140 INVPDNALSMAINKEGVVSVTL--PGNAGVNVQIGQLQVATFINPAGLQSVGENLYLETD 197

Query: 68  VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
                 + +       +     V+  NVNV  E  +M    R Y  N + +K S +M+  
Sbjct: 198 ASGPANLLQPGADGAGSIMQNYVETSNVNVAEELVNMITAQRAYEMNSKAVKTSDEMLAR 257

Query: 128 TLDL 131
              L
Sbjct: 258 LTQL 261



 Score = 39.5 bits (90), Expect = 0.15,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 24/61 (39%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ S  IA +GL  Q   M +IS N+AN +T G       ++              G   
Sbjct: 1  MMRSLWIAKTGLESQQTSMDVISHNLANVQTNGFKRERAVFQDLMYQTLRQPGAQVGDAN 60

Query: 64 K 64
          +
Sbjct: 61 Q 61


>gi|256014942|ref|YP_003104951.1| flagellar basal-body rod protein FlgG [Brucella microti CCM 4915]
 gi|255997602|gb|ACU49289.1| flagellar basal-body rod protein FlgG [Brucella microti CCM 4915]
          Length = 262

 Score = 59.5 bits (142), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 15/79 (18%), Positives = 29/79 (36%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            + E  +   GG   ++        V         +   G ++  NV+ + E  D+    
Sbjct: 178 FTNEAGLEPLGGNLYRETEASGGPLVGVPGDPGYGSIKQGYLEASNVDPVKEITDLITAQ 237

Query: 109 RLYMANLQTIKQSHDMMTT 127
           R Y  N + I+ + +M  T
Sbjct: 238 RAYEMNSKVIQAADEMAAT 256



 Score = 44.9 bits (104), Expect = 0.004,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 21/40 (52%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          + +  IA +G+  Q   +++I+ NIAN  TTG       +
Sbjct: 1  MKALMIAATGMNAQQLNLEVIANNIANINTTGFKRARAEF 40


>gi|74101660|gb|AAZ99750.1| FlgGL [Aeromonas hydrophila]
          Length = 275

 Score = 59.5 bits (142), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 20/123 (16%), Positives = 36/123 (29%), Gaps = 3/123 (2%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            ++    I ++   V       +S   A      +            +    +   GG  
Sbjct: 149 PMLPQIQIPDNATKVSIGTDGTVS---ATLPGQQENVELGRITLTNFTNPAGLEALGGNL 205

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
            +  G                A     ++  NVNV+ E  DM  T R Y  N + +  + 
Sbjct: 206 YRATGASGEAIEGVPGEEAMGAIKQFTLESSNVNVVEEMVDMITTQRAYEMNAKVVSAAD 265

Query: 123 DMM 125
            M+
Sbjct: 266 QML 268



 Score = 39.5 bits (90), Expect = 0.14,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 22/41 (53%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          + A+  ++ +GL+ Q A+M  IS N+AN  T G       +
Sbjct: 15 MHAALWVSKTGLSAQDAKMASISNNLANVNTVGFKRDRVAF 55


>gi|323705438|ref|ZP_08117013.1| fagellar hook-basal body protein [Thermoanaerobacterium
           xylanolyticum LX-11]
 gi|323535340|gb|EGB25116.1| fagellar hook-basal body protein [Thermoanaerobacterium
           xylanolyticum LX-11]
          Length = 424

 Score = 59.5 bits (142), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 33/85 (38%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
               + +   G              +   + G       G ++  NV++  E A+M  T 
Sbjct: 340 FQNTQGLEKVGNTMFINTVNSGDPMIGAANTGTRGTIDPGTLEMSNVDLANEFANMITTQ 399

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R + AN + I  S +++   ++L+R
Sbjct: 400 RGFEANAKVITTSDEILQDLVNLIR 424



 Score = 39.1 bits (89), Expect = 0.20,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 27/68 (39%), Gaps = 4/68 (5%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR----RKTISFEEVMHGSG 59
          ++ S + A SGL    A M +I  NIAN  T G       ++    +            G
Sbjct: 1  MLRSMYSAVSGLKANQAEMDVIGNNIANVNTVGFKASRMTFKEIFNQTIKGASAPQDNGG 60

Query: 60 GVRVKKIG 67
          G   ++IG
Sbjct: 61 GTNPQQIG 68


>gi|315497625|ref|YP_004086429.1| fagellar hook-basal body protein [Asticcacaulis excentricus CB 48]
 gi|315415637|gb|ADU12278.1| fagellar hook-basal body protein [Asticcacaulis excentricus CB 48]
          Length = 472

 Score = 59.5 bits (142), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 17/99 (17%), Positives = 34/99 (34%)

Query: 35  TGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPN 94
            G T         T    + +    G             ++            G ++  +
Sbjct: 374 NGSTRDIAQLALATFVNADGLTPVSGNAYTVSNDSGPLTLKVPGVSGAGLLGVGTLEASD 433

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           V++  E  ++  T R Y AN +TI  + +M+   L++ R
Sbjct: 434 VDLSEEFTNLIVTQRAYSANSRTITTADEMLQELLNIKR 472



 Score = 35.2 bits (79), Expect = 3.0,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 26/72 (36%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            L AS     +GLA  S  +  IS NIAN+ TT        ++    +       + G 
Sbjct: 1  MSLSASMQAGVAGLAANSNALSAISNNIANSTTTAYKRVRTDFQSIVTASSTPTGYNAGG 60

Query: 62 RVKKIGVDQSTF 73
           +       ST 
Sbjct: 61 VISTTRHMISTL 72


>gi|291286229|ref|YP_003503045.1| fagellar hook-basal body protein [Denitrovibrio acetiphilus DSM
           12809]
 gi|290883389|gb|ADD67089.1| fagellar hook-basal body protein [Denitrovibrio acetiphilus DSM
           12809]
          Length = 829

 Score = 59.5 bits (142), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 18/86 (20%), Positives = 33/86 (38%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
           T +    +   G    +K        +     G     A+  ++  NV++  E  +M  T
Sbjct: 744 TFTNPGGLTKVGDTTFQKSSNSGDPAIGRPGTGFRGKVAAETLENSNVDLSTEFVNMITT 803

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R + AN + I  S +M+   + L R
Sbjct: 804 QRGFQANSRVITTSDEMLQELMSLKR 829



 Score = 36.0 bits (81), Expect = 1.7,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 30/72 (41%), Gaps = 4/72 (5%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY----RRKTISFEEVMHGSG 59
          ++ S + A SGL+V    M ++  NI+N  T G   G   +     +  +         G
Sbjct: 1  MMRSLYSAISGLSVNQQAMDVLGNNISNVNTVGYKSGRAVFEDMLSQTLVGSTAPSDTLG 60

Query: 60 GVRVKKIGVDQS 71
          G    ++G+  S
Sbjct: 61 GTNSTQVGLGTS 72


>gi|325529016|gb|EGD06029.1| flagellar basal body rod protein FlgG [Burkholderia sp. TJI49]
          Length = 262

 Score = 59.5 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 18/88 (20%), Positives = 31/88 (35%)

Query: 45  RRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
           +  T      +   G     +     +  V +           G V+  NVNV+ E  +M
Sbjct: 174 QIATFINPAGLEARGENLFSETTSSGAPNVSQPGLNGAGTLNQGYVEASNVNVVQELVNM 233

Query: 105 RETNRLYMANLQTIKQSHDMMTTTLDLL 132
            +T R Y  N + +  S  M+ T   + 
Sbjct: 234 IQTQRAYEINSKAVTTSDQMLQTVTQMK 261



 Score = 40.6 bits (93), Expect = 0.063,   Method: Composition-based stats.
 Identities = 14/33 (42%), Positives = 21/33 (63%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          +  S +IA +G+  Q A+M +IS N+AN  T G
Sbjct: 1  MNRSLYIAATGMNAQQAQMDVISNNLANVSTNG 33


>gi|291528558|emb|CBK94144.1| fagellar hook-basal body proteins [Eubacterium rectale M104/1]
          Length = 272

 Score = 59.5 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 16/87 (18%), Positives = 32/87 (36%), Gaps = 1/87 (1%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANA-SGIVKYPNVNVLVETADMRE 106
             +    +    G  +       +  +E  +P    +   +G ++  NV V  E  ++  
Sbjct: 186 QFNNPSGLEKQSGSLLAATANSGNPMLEAANPALKNSKVVTGYLEGSNVQVADEMVNLIV 245

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
             R Y  N + I  +  M+ T  +L R
Sbjct: 246 AQRAYELNSKAITTADSMLETANNLRR 272



 Score = 39.9 bits (91), Expect = 0.14,   Method: Composition-based stats.
 Identities = 12/64 (18%), Positives = 27/64 (42%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ + + A +G+  +   +  I+ N++N  TTG       ++       +    SG    
Sbjct: 1  MMRALYTAATGMRAEQTNVDTIANNLSNVNTTGFKGQRTEFKSLLYQTIQTRSTSGNGDA 60

Query: 64 KKIG 67
          K +G
Sbjct: 61 KPVG 64


>gi|221199741|ref|ZP_03572784.1| flagellar basal-body rod protein FlgG [Burkholderia multivorans
           CGD2M]
 gi|221208654|ref|ZP_03581654.1| flagellar basal-body rod protein FlgG [Burkholderia multivorans
           CGD2]
 gi|221171465|gb|EEE03912.1| flagellar basal-body rod protein FlgG [Burkholderia multivorans
           CGD2]
 gi|221179980|gb|EEE12384.1| flagellar basal-body rod protein FlgG [Burkholderia multivorans
           CGD2M]
          Length = 262

 Score = 59.5 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 18/88 (20%), Positives = 31/88 (35%)

Query: 45  RRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
           +  T      +   G     +     +  V +           G V+  NVNV+ E  +M
Sbjct: 174 QIATFINPAGLEAKGENLFAETTSSGAPNVSQPGLNGAGTLNQGYVEASNVNVVQELVNM 233

Query: 105 RETNRLYMANLQTIKQSHDMMTTTLDLL 132
            +T R Y  N + +  S  M+ T   + 
Sbjct: 234 IQTQRAYEINSKAVTTSDQMLQTVTQMK 261



 Score = 41.0 bits (94), Expect = 0.049,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 22/41 (53%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  S +IA +G+  Q A+M +IS N+AN  T G       +
Sbjct: 1  MNRSLYIAATGMNAQQAQMDVISNNLANVSTNGFKGSRAVF 41


>gi|260779345|ref|ZP_05888237.1| flagellar basal-body rod protein FlgG [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260605509|gb|EEX31804.1| flagellar basal-body rod protein FlgG [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 261

 Score = 59.5 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 21/123 (17%), Positives = 38/123 (30%), Gaps = 3/123 (2%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            L     I  + L+V       +S   A++    +                 +   GG  
Sbjct: 135 PLEPQIQIPENALSVSVGVDGTVSATTADSTAPQELGQIT---LAKFINPAGLEAVGGNL 191

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
            ++                  +   G ++  NV V+ E  DM  T R Y  N + +  + 
Sbjct: 192 FRETEASGQADELIAGEDGVGSIKQGSLEGSNVQVVEEMVDMITTQRAYEMNAKVVSAAD 251

Query: 123 DMM 125
           DM+
Sbjct: 252 DML 254



 Score = 40.6 bits (93), Expect = 0.064,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 21/41 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          + ++  ++ +G+A Q  +M  IS N+AN  T G       +
Sbjct: 1  MHSALWVSKTGMAAQDTKMTAISNNLANVNTVGFKRDRVVF 41


>gi|209521591|ref|ZP_03270289.1| flagellar basal-body rod protein FlgG [Burkholderia sp. H160]
 gi|209497974|gb|EDZ98131.1| flagellar basal-body rod protein FlgG [Burkholderia sp. H160]
          Length = 262

 Score = 59.5 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/127 (18%), Positives = 44/127 (34%), Gaps = 3/127 (2%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           I +  I  +  ++       +S  +A    + +T      +  T      +   G     
Sbjct: 137 IPAITIPTNATSLTIGSDGSVSITVA---GSSNTQQLGTMQLATFINPAGLDAKGENLFA 193

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           +     +  V +           G V+  NVNV+ E  +M +T R Y  N + +  S  M
Sbjct: 194 ETASSGAPNVSQPGLNGAGTLNQGYVEASNVNVVQELVNMIQTQRAYEINSKAVTTSDQM 253

Query: 125 MTTTLDL 131
           + T   +
Sbjct: 254 LQTLSQM 260



 Score = 40.2 bits (92), Expect = 0.097,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 22/41 (53%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  S +IA +G+  Q A+M +IS N+AN  T G       +
Sbjct: 1  MNRSLYIAATGMNAQQAQMDVISNNLANVSTNGFKGSRAVF 41


>gi|229544402|ref|ZP_04433460.1| protein of unknown function DUF1078 domain protein [Bacillus
           coagulans 36D1]
 gi|229324887|gb|EEN90564.1| protein of unknown function DUF1078 domain protein [Bacillus
           coagulans 36D1]
          Length = 254

 Score = 59.5 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 18/76 (23%), Positives = 32/76 (42%), Gaps = 2/76 (2%)

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVAN--ASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           G  +       +  V    PG   A    SG ++  NV++  E  +M    R + AN + 
Sbjct: 179 GGNLYTTTNSNAGTVTVSQPGQNGAGTIKSGYLEMSNVDLSEELTNMIVAERGFQANTRI 238

Query: 118 IKQSHDMMTTTLDLLR 133
           I  S +++   ++L R
Sbjct: 239 ITTSDEILQELVNLKR 254



 Score = 37.2 bits (84), Expect = 0.75,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 26/64 (40%), Gaps = 2/64 (3%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ S +   SG+      +  I  NIAN  T G   G   +  K    + +   + G   
Sbjct: 1  MLRSLYSGVSGMKNFQTELDTIGNNIANVNTYGYKKGRVTF--KDAISQTLASATPGTSA 58

Query: 64 KKIG 67
          +++G
Sbjct: 59 QQVG 62


>gi|291523980|emb|CBK89567.1| fagellar hook-basal body proteins [Eubacterium rectale DSM 17629]
          Length = 272

 Score = 59.5 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 16/87 (18%), Positives = 32/87 (36%), Gaps = 1/87 (1%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANA-SGIVKYPNVNVLVETADMRE 106
             +    +    G  +       +  +E  +P    +   +G ++  NV V  E  ++  
Sbjct: 186 QFNNPSGLEKQSGSLLAATANSGNPMLEAANPALKSSKVVTGYLEGSNVQVADEMVNLIV 245

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
             R Y  N + I  +  M+ T  +L R
Sbjct: 246 AQRAYELNSKAITTADSMLETANNLRR 272



 Score = 39.9 bits (91), Expect = 0.12,   Method: Composition-based stats.
 Identities = 12/64 (18%), Positives = 27/64 (42%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ + + A +G+  +   +  I+ N++N  TTG       ++       +    SG    
Sbjct: 1  MMRALYTAATGMRAEQTNVDTIANNLSNVNTTGFKGQRTEFKSLLYQTIQTRSTSGNGDA 60

Query: 64 KKIG 67
          K +G
Sbjct: 61 KPVG 64


>gi|220905353|ref|YP_002480665.1| hypothetical protein Ddes_2091 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|219869652|gb|ACL49987.1| protein of unknown function DUF1078 domain protein [Desulfovibrio
           desulfuricans subsp. desulfuricans str. ATCC 27774]
          Length = 499

 Score = 59.5 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 15/86 (17%), Positives = 33/86 (38%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
             + E+ +   G              + E    +     +  ++  NV+V  E A+M  T
Sbjct: 414 RFTSEDGLRREGHNMFSATADAGQMDMGEAGTENYGTIRAYNIENSNVDVATEMANMIIT 473

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R + +N + +  +  M+   ++L R
Sbjct: 474 QRGFQSNSKVVTTADQMLQKAVELKR 499


>gi|259908810|ref|YP_002649166.1| Flagellar basal-body rod protein [Erwinia pyrifoliae Ep1/96]
 gi|224964432|emb|CAX55941.1| Flagellar basal-body rod protein [Erwinia pyrifoliae Ep1/96]
 gi|283478792|emb|CAY74708.1| Flagellar basal-body rod protein flgG [Erwinia pyrifoliae DSM
           12163]
 gi|310767292|gb|ADP12242.1| Flagellar basal-body rod protein [Erwinia sp. Ejp617]
          Length = 260

 Score = 59.5 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 21/129 (16%), Positives = 41/129 (31%), Gaps = 3/129 (2%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            +  +  I  + L++  +R  ++S      +   +          T   +  +   G   
Sbjct: 135 PVQPAIVIPANSLSMTISRDGVVS---VTQQGQANPVQVGQLTLSTFMNDAGLSSMGENL 191

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
            ++     +                G V+  NVNV  E   M +T R Y  N + I  S 
Sbjct: 192 YQETQASGAPNESNPGNNGAGTLYQGYVETSNVNVAEELVSMIQTQRAYEINSKAISTSD 251

Query: 123 DMMTTTLDL 131
            M+     +
Sbjct: 252 QMLAKLTQI 260



 Score = 39.9 bits (91), Expect = 0.12,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 20/41 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I S  IA +GL  Q   M +I+ N+AN  T G       +
Sbjct: 1  MIRSLWIAKTGLDGQQTNMDVIANNLANVSTNGFKRQRAVF 41


>gi|33592481|ref|NP_880125.1| flagellar basal body rod protein FlgG [Bordetella pertussis Tohama
           I]
 gi|33572127|emb|CAE41669.1| flagellar basal-body rod protein FlgG [Bordetella pertussis Tohama
           I]
 gi|332381898|gb|AEE66745.1| flagellar basal body rod protein FlgG [Bordetella pertussis CS]
          Length = 261

 Score = 59.5 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 20/124 (16%), Positives = 40/124 (32%), Gaps = 2/124 (1%)

Query: 8   AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
            ++ ++ L++   +   +S  +      G        +  T      +   G     +  
Sbjct: 140 INVPDNALSLTIGKDGTVS--VTQPGAAGTNVQIGQLQVATFINPTGLQSVGENLYLETD 197

Query: 68  VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
                 + +             V+  NVNV  E  +M  T R Y  N + +K S +M+  
Sbjct: 198 SSGPANLLQPGIDGAGQILQQYVETSNVNVAEELVNMITTQRAYEMNSKAVKTSDEMLAR 257

Query: 128 TLDL 131
              L
Sbjct: 258 LTQL 261



 Score = 40.2 bits (92), Expect = 0.096,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 25/61 (40%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ S  +A +GL  Q   M +IS N+AN +T G   G   ++              G   
Sbjct: 1  MMRSLWVAKTGLEGQQTSMDVISNNLANVQTNGFKWGRAVFQDLMYQTLRQPGAQVGDAN 60

Query: 64 K 64
          +
Sbjct: 61 Q 61


>gi|149195335|ref|ZP_01872422.1| flagellar hook protein E [Caminibacter mediatlanticus TB-2]
 gi|149134527|gb|EDM23016.1| flagellar hook protein E [Caminibacter mediatlanticus TB-2]
          Length = 869

 Score = 59.5 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 17/89 (19%), Positives = 28/89 (31%)

Query: 45  RRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
                   E +   GG             V     G   +     ++  NV++      +
Sbjct: 781 AIAKFVNNEGLMNEGGTLFSASPNSGDPIVGTAGTGGRGSIQPSALEMSNVDLSRSLTQL 840

Query: 105 RETNRLYMANLQTIKQSHDMMTTTLDLLR 133
               R + AN +TI  S  M+ T L L +
Sbjct: 841 IVIQRGFQANSKTITTSDQMLNTLLQLKQ 869



 Score = 40.6 bits (93), Expect = 0.072,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 17/42 (40%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S     SGL      M + + NIAN  T G       ++
Sbjct: 1  MMRSLWSGVSGLNAHQIAMDVEANNIANVNTVGFKYSRTNFQ 42


>gi|78224295|ref|YP_386042.1| hypothetical protein Gmet_3103 [Geobacter metallireducens GS-15]
 gi|78195550|gb|ABB33317.1| conserved hypothetical protein [Geobacter metallireducens GS-15]
          Length = 419

 Score = 59.5 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 16/86 (18%), Positives = 32/86 (37%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
             +    +  +GG   ++                     +  ++  NV++  +   M  T
Sbjct: 334 KFASTTGLSKAGGTLFEETLDSGQPLFSNASTPGVGKVLANSLEQSNVDMAAQFVKMITT 393

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y AN +TI  + +M+   L+L R
Sbjct: 394 QRGYSANSKTITTADEMLQEVLNLKR 419



 Score = 34.5 bits (77), Expect = 5.1,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 17/40 (42%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGS 41
            + ++ +   SGL      M +I  NI+N  T G   G 
Sbjct: 1  MSVTSALYTGISGLNANGEAMSVIGNNISNVNTIGFKQGR 40


>gi|310641552|ref|YP_003946310.1| fagellar hook-basal body protein [Paenibacillus polymyxa SC2]
 gi|309246502|gb|ADO56069.1| Fagellar hook-basal body protein [Paenibacillus polymyxa SC2]
          Length = 272

 Score = 59.5 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 21/134 (15%), Positives = 47/134 (35%), Gaps = 18/134 (13%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           + +  I+  G  VQ+               +G+T  +       +   E +   GG   +
Sbjct: 152 VTAFSISQDGTIVQTL-------------ASGETDNATKIGVTKVINPEGLEKIGGSLYR 198

Query: 65  KIGVDQSTFVEEFDPGHPVANASGI-----VKYPNVNVLVETADMRETNRLYMANLQTIK 119
                 +         +   + +G      ++  NV++  E  +M    R + AN + I 
Sbjct: 199 ATVNSGNEGEITAMEANSADDGTGAIISGQLEMSNVDLTGEFTEMIVAQRGFQANSRIIT 258

Query: 120 QSHDMMTTTLDLLR 133
            S +++   ++L R
Sbjct: 259 TSDEVLQEVVNLKR 272



 Score = 35.6 bits (80), Expect = 2.4,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 18/33 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ S +   SG+     ++ +I  NIAN  TTG
Sbjct: 1  MLRSMYSGVSGMKGFQTKLDVIGNNIANVNTTG 33


>gi|161526184|ref|YP_001581196.1| flagellar basal body rod protein FlgG [Burkholderia multivorans
           ATCC 17616]
 gi|189349100|ref|YP_001944728.1| flagellar basal body rod protein FlgG [Burkholderia multivorans
           ATCC 17616]
 gi|221215573|ref|ZP_03588536.1| flagellar basal-body rod protein FlgG [Burkholderia multivorans
           CGD1]
 gi|160343613|gb|ABX16699.1| flagellar basal-body rod protein FlgG [Burkholderia multivorans
           ATCC 17616]
 gi|189333122|dbj|BAG42192.1| flagellar basal-body rod protein [Burkholderia multivorans ATCC
           17616]
 gi|221164561|gb|EED97044.1| flagellar basal-body rod protein FlgG [Burkholderia multivorans
           CGD1]
          Length = 262

 Score = 59.5 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 18/88 (20%), Positives = 31/88 (35%)

Query: 45  RRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
           +  T      +   G     +     +  V +           G V+  NVNV+ E  +M
Sbjct: 174 QIATFINPAGLEAKGENLFAETTSSGAPNVSQPGLNGAGTLNQGYVEASNVNVVQELVNM 233

Query: 105 RETNRLYMANLQTIKQSHDMMTTTLDLL 132
            +T R Y  N + +  S  M+ T   + 
Sbjct: 234 IQTQRAYEINSKAVTTSDQMLQTVTQMK 261



 Score = 41.0 bits (94), Expect = 0.051,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 22/41 (53%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  S +IA +G+  Q A+M +IS N+AN  T G       +
Sbjct: 1  MNRSLYIAATGMNAQQAQMDVISNNLANVSTNGFKGSRAVF 41


>gi|89068731|ref|ZP_01156117.1| hypothetical protein OG2516_06821 [Oceanicola granulosus HTCC2516]
 gi|89045694|gb|EAR51756.1| hypothetical protein OG2516_06821 [Oceanicola granulosus HTCC2516]
          Length = 261

 Score = 59.5 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 22/97 (22%), Positives = 34/97 (35%), Gaps = 5/97 (5%)

Query: 39  PGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVAN-----ASGIVKYP 93
               P     ++    M+ SG   V      QS    E  P  P          G ++  
Sbjct: 163 NDPAPVELGQLTLTTFMNDSGLRPVGNNLFLQSEASGEPVPAVPGEPGIGIIRQGHLEGS 222

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           NVN++ +  D+    R Y  N + I+ +  MM T   
Sbjct: 223 NVNIIQQITDLIAAQRAYEMNSKAIETADQMMNTANQ 259



 Score = 43.3 bits (100), Expect = 0.012,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 22/41 (53%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          + +  IA +G+  Q   + +IS NIANA TTG       ++
Sbjct: 1  MKALGIATTGMLAQQTNVDVISNNIANANTTGFKSSRAAFQ 41


>gi|291540627|emb|CBL13738.1| fagellar hook-basal body proteins [Roseburia intestinalis XB6B4]
          Length = 272

 Score = 59.5 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 20/45 (44%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NV V  E  ++    R Y  N + I  S +M+    +L R
Sbjct: 228 YLEGSNVQVADEMVNLIIAQRAYQLNSKAITTSDEMLEQANNLKR 272



 Score = 36.8 bits (83), Expect = 1.1,   Method: Composition-based stats.
 Identities = 12/63 (19%), Positives = 25/63 (39%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ + + A +G+  Q + +  IS N++N  T G       ++       +    S     
Sbjct: 1  MMRALYTAATGMIAQQSNVDNISNNLSNVNTVGYKQEKMEFKSLLYQTIQTRTTSANGEE 60

Query: 64 KKI 66
          K I
Sbjct: 61 KPI 63


>gi|33601543|ref|NP_889103.1| flagellar basal body rod protein FlgG [Bordetella bronchiseptica
           RB50]
 gi|33575979|emb|CAE33058.1| flagellar basal-body rod protein [Bordetella bronchiseptica RB50]
          Length = 261

 Score = 59.5 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 20/124 (16%), Positives = 40/124 (32%), Gaps = 2/124 (1%)

Query: 8   AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
            ++ ++ L++   +   +S  +      G        +  T      +   G     +  
Sbjct: 140 INVPDNALSLTIGKDGTVS--VTQPGAAGTNVQIGQLQVATFINPTGLQSVGENLYLETD 197

Query: 68  VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
                 + +             V+  NVNV  E  +M  T R Y  N + +K S +M+  
Sbjct: 198 SSGPANLLQPGIDGAGQILQQYVETSNVNVAEELVNMITTQRAYEMNSKAVKTSDEMLAR 257

Query: 128 TLDL 131
              L
Sbjct: 258 LTQL 261



 Score = 41.0 bits (94), Expect = 0.048,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 25/61 (40%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ S  +A +GL  Q   M +IS N+AN +T G   G   ++              G   
Sbjct: 1  MMRSLWVAKTGLEGQQTSMDVISNNLANVQTNGFKRGRAVFQDLMYQTLRQPGAQVGDAN 60

Query: 64 K 64
          +
Sbjct: 61 Q 61


>gi|296330843|ref|ZP_06873318.1| flagellar basal body rod protein FlgG [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305674361|ref|YP_003866033.1| flagellar hook protein [Bacillus subtilis subsp. spizizenii str.
           W23]
 gi|296151848|gb|EFG92722.1| flagellar basal body rod protein FlgG [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305412605|gb|ADM37724.1| flagellar hook protein [Bacillus subtilis subsp. spizizenii str.
           W23]
          Length = 264

 Score = 59.5 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 25/48 (52%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            SG ++  NV++  E  +M    R + +N + I  S +++   ++L R
Sbjct: 217 KSGFLEMSNVDLTDEFTEMIVAQRGFQSNSKIITTSDEILQELVNLKR 264



 Score = 35.6 bits (80), Expect = 2.5,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 19/42 (45%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S +   SG+     ++ +I  NIAN  T G       ++
Sbjct: 1  MLRSLYSGISGMKNFQTKLDVIGNNIANVNTVGFKKSRVTFK 42


>gi|1086561|gb|AAB68968.1| FlgG [Agrobacterium tumefaciens]
 gi|2459714|gb|AAB71790.1| FlgG [Agrobacterium tumefaciens]
          Length = 262

 Score = 59.5 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 19/122 (15%), Positives = 37/122 (30%), Gaps = 3/122 (2%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           I + +I      +   R   ++  I NA                 + E  +   G     
Sbjct: 137 IPNINIPTDAQDITITRTGQVTARIGNAADFTQLGQLT---IANFANEAGLKPLGDNLFS 193

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           +     +  V   D           ++  NV+ + E  D+    R Y  N + I  + +M
Sbjct: 194 QTPASGAPVVGVPDDPSYGYVKQSYLEGSNVDAVKEITDLITAQRAYEMNSKVITTADEM 253

Query: 125 MT 126
            +
Sbjct: 254 AS 255



 Score = 43.7 bits (101), Expect = 0.008,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 21/40 (52%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          + +  IA +G+  Q   +++I+ NIAN  TTG       +
Sbjct: 1  MRALAIAATGMDAQQTNLEVIANNIANINTTGYKRARAEF 40


>gi|271500068|ref|YP_003333093.1| flagellar basal-body rod protein FlgG [Dickeya dadantii Ech586]
 gi|270343623|gb|ACZ76388.1| flagellar basal-body rod protein FlgG [Dickeya dadantii Ech586]
          Length = 260

 Score = 59.1 bits (141), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 18/126 (14%), Positives = 33/126 (26%), Gaps = 3/126 (2%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
            +  I  +   +   R  +++      +                  E  +   G     +
Sbjct: 138 PAITIPANATNITVGRDGVVT---VTQQGQTAPVQVGQLNLAMFINEAGLQNMGENLYAE 194

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
                +                  V+  NVNV  E   M +T R Y  N + I  +  M+
Sbjct: 195 TASSGAPTQSTPGLNGAGLIMQKYVETSNVNVAEELVSMIQTQRAYEINSKAISSTDQML 254

Query: 126 TTTLDL 131
                L
Sbjct: 255 QKLTQL 260



 Score = 43.3 bits (100), Expect = 0.012,   Method: Composition-based stats.
 Identities = 18/93 (19%), Positives = 27/93 (29%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I S  IA +GL  Q   M +IS N+AN  T G       +                 + 
Sbjct: 1  MIRSLWIAKTGLNAQQTNMDVISNNLANVSTNGFKRQRAVFEDLMYQTVRQPGAQSSEQT 60

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVN 96
                Q            +    G+ +  N  
Sbjct: 61 TLPSGLQLGTGVRPVSTERIHTQGGLTETGNAK 93


>gi|170288059|ref|YP_001738297.1| hypothetical protein TRQ2_0255 [Thermotoga sp. RQ2]
 gi|170175562|gb|ACB08614.1| protein of unknown function DUF1078 domain protein [Thermotoga sp.
           RQ2]
          Length = 750

 Score = 59.1 bits (141), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 22/47 (46%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NV++  E   M    R + AN + I  +  ++   +++ R
Sbjct: 704 PGALEMSNVDLAEEFTKMIVAQRGFQANARVITTADQILNELVNIKR 750


>gi|283953936|ref|ZP_06371465.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni 414]
 gi|283794541|gb|EFC33281.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni 414]
          Length = 262

 Score = 59.1 bits (141), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 17/86 (19%), Positives = 27/86 (31%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                  +H  G     + G   +                G ++  NV ++ E  D+   
Sbjct: 177 QFINPAGLHSMGDNLYLETGASGAPVAGIAGQDGLGTIRHGFIELSNVQLVEEMTDLITG 236

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y A  + I  S DM+     L R
Sbjct: 237 QRAYEAGSKAITTSDDMLGIVNQLKR 262



 Score = 41.0 bits (94), Expect = 0.053,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 19/41 (46%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          + S H A +G+  Q  ++ + S NIAN  T G       + 
Sbjct: 1  MRSLHTAATGMVAQQTQIDVTSNNIANVNTAGFKKSRAEFA 41


>gi|218885350|ref|YP_002434671.1| hypothetical protein DvMF_0246 [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|218756304|gb|ACL07203.1| protein of unknown function DUF1078 domain protein [Desulfovibrio
           vulgaris str. 'Miyazaki F']
          Length = 545

 Score = 59.1 bits (141), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 14/85 (16%), Positives = 31/85 (36%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +    +   GG    +            +     +  S  ++  NV++  E   M  T 
Sbjct: 461 FTSPTNLRREGGNLFSETRASGDALAGPANANGYGSVNSNSLEQSNVDLAREFVQMITTQ 520

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R + +N + I  +  M+ T +++ R
Sbjct: 521 RGFQSNSKVITTTDTMLETVVNMKR 545



 Score = 36.4 bits (82), Expect = 1.2,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 27/81 (33%), Gaps = 4/81 (4%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDT----PGSDPYRRKTISFEEVMHG 57
            + AS     SGL     +M ++  NIAN  T G         D   +   S   V   
Sbjct: 1  MSVTASMWTGVSGLLAHGEKMNVLGNNIANVNTVGFKGSRMDFQDFINQDVYSAVGVSQV 60

Query: 58 SGGVRVKKIGVDQSTFVEEFD 78
            GV +  I  D S    E  
Sbjct: 61 GRGVSIGAIFGDFSQGAFETT 81


>gi|187925759|ref|YP_001897401.1| flagellar basal body rod protein FlgG [Burkholderia phytofirmans
           PsJN]
 gi|187716953|gb|ACD18177.1| flagellar basal-body rod protein FlgG [Burkholderia phytofirmans
           PsJN]
          Length = 262

 Score = 59.1 bits (141), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/127 (18%), Positives = 46/127 (36%), Gaps = 3/127 (2%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           I +  I N+  ++      ++S  +A    + ++      +  T      +   G     
Sbjct: 137 IPAITIPNNATSLTIGSDGVVSITVA---GSTNSQQLGSMQIATFINPAGLDAKGENLFA 193

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           +     +  V +           G V+  NVNV+ E  +M +T R Y  N + +  S  M
Sbjct: 194 ETASSGAPNVAQPGLNGAGTLNQGYVEASNVNVVQELVNMIQTQRAYEINSKAVTTSDQM 253

Query: 125 MTTTLDL 131
           + T   +
Sbjct: 254 LQTLSQM 260



 Score = 39.9 bits (91), Expect = 0.11,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 22/41 (53%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  S +IA +G+  Q A+M +IS N+AN  T G       +
Sbjct: 1  MNRSLYIAATGMNAQQAQMDVISNNLANVSTNGFKGSRAVF 41


>gi|91785632|ref|YP_560838.1| flagellar basal body rod protein FlgG [Burkholderia xenovorans
           LB400]
 gi|91689586|gb|ABE32786.1| flgG; flagellar basal-body rod protein [Burkholderia xenovorans
           LB400]
          Length = 262

 Score = 59.1 bits (141), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/127 (18%), Positives = 46/127 (36%), Gaps = 3/127 (2%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           I +  I N+  ++      ++S  +A    + ++      +  T      +   G     
Sbjct: 137 IPAITIPNNATSLTIGSDGVVSITVA---GSTNSQQLGSMQIATFINPAGLDAKGENLFA 193

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           +     +  V +           G V+  NVNV+ E  +M +T R Y  N + +  S  M
Sbjct: 194 ETASSGAPNVAQPGLNGAGTLNQGYVEASNVNVVQELVNMIQTQRAYEINSKAVTTSDQM 253

Query: 125 MTTTLDL 131
           + T   +
Sbjct: 254 LQTLSQM 260



 Score = 39.9 bits (91), Expect = 0.11,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 22/41 (53%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  S +IA +G+  Q A+M +IS N+AN  T G       +
Sbjct: 1  MNRSLYIAATGMNAQQAQMDVISNNLANVSTNGFKGSRAVF 41


>gi|297183504|gb|ADI19634.1| flagellar hook protein flge [uncultured delta proteobacterium
           HF0770_45N15]
          Length = 494

 Score = 59.1 bits (141), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 29/58 (50%)

Query: 76  EFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           E          S +++  NV++ +E   M E+ R + AN +T+  S +M+   +++ R
Sbjct: 437 EPGTAGFGEIRSQMLEQSNVDLSLEFVKMIESQRAFQANAKTVTTSDEMIVDLVNMKR 494



 Score = 34.5 bits (77), Expect = 4.6,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 16/43 (37%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
            L+ S     SG+      MQ+   NI+N  T G       +
Sbjct: 1  MALLGSLQTGASGVKTYGKAMQVTGNNISNVNTFGFKRNIIAF 43


>gi|239815249|ref|YP_002944159.1| flagellar basal-body rod protein FlgG [Variovorax paradoxus S110]
 gi|239801826|gb|ACS18893.1| flagellar basal-body rod protein FlgG [Variovorax paradoxus S110]
          Length = 262

 Score = 59.1 bits (141), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 24/47 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NV +  E  ++    R+Y AN++ ++ S +M+     L +
Sbjct: 216 QGFLEGSNVKLTEEMVNLMVAQRVYEANVKVMQASDEMLGMINGLRK 262



 Score = 46.0 bits (107), Expect = 0.002,   Method: Composition-based stats.
 Identities = 10/33 (30%), Positives = 19/33 (57%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          +  + +I+ +G+  Q   +  I+ N+AN  TTG
Sbjct: 1  MFDALYISATGMQAQQLNVDTIANNLANVNTTG 33


>gi|167040321|ref|YP_001663306.1| hypothetical protein Teth514_1684 [Thermoanaerobacter sp. X514]
 gi|300914405|ref|ZP_07131721.1| fagellar hook-basal body protein [Thermoanaerobacter sp. X561]
 gi|307724359|ref|YP_003904110.1| fagellar hook-basal body protein [Thermoanaerobacter sp. X513]
 gi|166854561|gb|ABY92970.1| protein of unknown function DUF1078 domain protein
           [Thermoanaerobacter sp. X514]
 gi|300889340|gb|EFK84486.1| fagellar hook-basal body protein [Thermoanaerobacter sp. X561]
 gi|307581420|gb|ADN54819.1| fagellar hook-basal body protein [Thermoanaerobacter sp. X513]
          Length = 417

 Score = 59.1 bits (141), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 14/85 (16%), Positives = 29/85 (34%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +   G              +         +   G ++  NV++  E  DM  T 
Sbjct: 333 FQNPMGLEKVGNTMFINTVNSGEPMIGAAGTDTRGSINPGTLEMSNVDLANEFTDMIVTQ 392

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R + AN + I  S +++   +++ R
Sbjct: 393 RGFQANARVITASDEILQDLVNIKR 417



 Score = 42.6 bits (98), Expect = 0.020,   Method: Composition-based stats.
 Identities = 15/42 (35%), Positives = 21/42 (50%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S + A SGL    ARM +I  NIAN  T G       ++
Sbjct: 1  MLRSMYSAVSGLKAHQARMDVIGNNIANVNTVGYKASRMTFK 42


>gi|315124200|ref|YP_004066204.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni ICDCCJ07001]
 gi|315017922|gb|ADT66015.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni ICDCCJ07001]
          Length = 263

 Score = 59.1 bits (141), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 17/86 (19%), Positives = 27/86 (31%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                  +H  G     + G   +                G ++  NV ++ E  D+   
Sbjct: 178 RFINPAGLHSMGDNLYLETGASGAPVAGIAGQDGLGTIRHGFIELSNVQLVEEMTDLITG 237

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y A  + I  S DM+     L R
Sbjct: 238 QRAYEAGSKAITTSDDMLGIVNQLKR 263



 Score = 42.9 bits (99), Expect = 0.015,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 20/42 (47%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S H A +G+  Q  ++ + S NIAN  T G       + 
Sbjct: 1  MMRSLHTAATGMVAQQTQIDVTSNNIANVNTAGFKKSRAEFA 42


>gi|223040682|ref|ZP_03610951.1| flagellar basal-body rod protein FlgG [Campylobacter rectus RM3267]
 gi|222878046|gb|EEF13158.1| flagellar basal-body rod protein FlgG [Campylobacter rectus RM3267]
          Length = 262

 Score = 59.1 bits (141), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 23/48 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             G V+  NV ++ E  D+    R Y AN + I  S DM++    L R
Sbjct: 215 RQGFVEMSNVQLVEEMTDLITGQRAYEANSKAITTSDDMLSIVNSLKR 262



 Score = 41.4 bits (95), Expect = 0.037,   Method: Composition-based stats.
 Identities = 14/91 (15%), Positives = 28/91 (30%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ S + A +G+  Q  ++ + S NIAN  T G       +        E    +     
Sbjct: 1  MMRSIYSAATGMIAQQTQIDVTSHNIANVNTIGYKKNRAEFADLMYQVMEYAGTATSATT 60

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIVKYPN 94
          K     +            + +     +  N
Sbjct: 61 KSPTGIEVGLGARPTAITKIFSQGYFKETSN 91


>gi|297584044|ref|YP_003699824.1| fagellar hook-basal body protein [Bacillus selenitireducens MLS10]
 gi|297142501|gb|ADH99258.1| fagellar hook-basal body protein [Bacillus selenitireducens MLS10]
          Length = 424

 Score = 59.1 bits (141), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 25/44 (56%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  NV++  E A+M  + R + AN + I  S +++   ++L R
Sbjct: 381 LEMSNVDLSEEFAEMIVSQRGFQANTRMITTSDEILQELINLKR 424



 Score = 34.1 bits (76), Expect = 7.3,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 18/41 (43%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I S +    G+     ++ +I  NI+N  T G   G   +
Sbjct: 1  MIRSLYSGIGGMNNFQTKLDVIGNNISNVNTFGFKKGRVTF 41


>gi|90423017|ref|YP_531387.1| flagellar basal body rod protein FlgG [Rhodopseudomonas palustris
           BisB18]
 gi|90105031|gb|ABD87068.1| Flagellar basal-body rod FlgG [Rhodopseudomonas palustris BisB18]
          Length = 262

 Score = 59.1 bits (141), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 16/113 (14%), Positives = 36/113 (31%), Gaps = 3/113 (2%)

Query: 24  IISENIANARTTGDTPGSDPYRR---KTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPG 80
            I+ N   + T   +       +        +  +   G     + G          +  
Sbjct: 150 TIASNGQVSVTVTGSTTPTVLGQISLTRFINKTGLQPQGDNLFIETGASGPPQDGIANAD 209

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
                    ++  NV V+ E +D+    R Y  N + +  +  M+ +T ++ R
Sbjct: 210 GYGDIQQQTLEQANVEVVTEISDLIAAQRAYEMNAKVVSAADQMLQSTSNMFR 262



 Score = 38.3 bits (87), Expect = 0.38,   Method: Composition-based stats.
 Identities = 15/41 (36%), Positives = 24/41 (58%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          + + + A +G+A Q   +Q+IS NIAN RTTG       ++
Sbjct: 1  MRALYTAATGMAAQELNVQVISNNIANMRTTGFKKQRAAFQ 41


>gi|309779449|ref|ZP_07674210.1| flagellar basal-body rod protein FlgG [Ralstonia sp. 5_7_47FAA]
 gi|308921690|gb|EFP67326.1| flagellar basal-body rod protein FlgG [Ralstonia sp. 5_7_47FAA]
          Length = 260

 Score = 59.1 bits (141), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 16/95 (16%), Positives = 32/95 (33%)

Query: 37  DTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVN 96
           +      ++         +   G     +     +  +         A     V+  NVN
Sbjct: 166 NNTQVGTFQLANFINPAGLRSMGENLYAETEASGTANLANPGSNGVGALNQNYVETSNVN 225

Query: 97  VLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           V+ E  +M +T R Y  N ++++ S  M+     L
Sbjct: 226 VVEEMVNMIQTQRAYEINSKSVQTSDQMLEKLSQL 260



 Score = 41.0 bits (94), Expect = 0.049,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 23/41 (56%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I S  I+ +G+  Q +++ +IS N+AN  TTG       +
Sbjct: 1  MIRSLWISKTGMDAQQSQLDVISNNLANVNTTGFKRSRAVF 41


>gi|299066528|emb|CBJ37718.1| Flagellar basal-body rod protein (Distal rod protein) [Ralstonia
           solanacearum CMR15]
          Length = 263

 Score = 59.1 bits (141), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 13/76 (17%), Positives = 30/76 (39%)

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
            G    +         V +    +    A G ++  NV ++ E   +    R Y AN++ 
Sbjct: 188 QGDNLYRASDTSGEPVVGKAGQDNLGTFAQGFLEGSNVKMIDEMVGLMVAQRAYEANVKV 247

Query: 118 IKQSHDMMTTTLDLLR 133
           ++ S +++    +L +
Sbjct: 248 VQASDEILGMVNNLRK 263



 Score = 45.6 bits (106), Expect = 0.002,   Method: Composition-based stats.
 Identities = 9/33 (27%), Positives = 18/33 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          +  + ++  +G+  Q   +  I+ N+AN  TTG
Sbjct: 1  MFDALYVGATGMQAQQLNLDTIANNLANVNTTG 33


>gi|328542111|ref|YP_004302220.1| flagellar hook-basal body protein [polymorphum gilvum SL003B-26A1]
 gi|326411861|gb|ADZ68924.1| Flagellar hook-basal body protein [Polymorphum gilvum SL003B-26A1]
          Length = 545

 Score = 59.1 bits (141), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/129 (17%), Positives = 44/129 (34%), Gaps = 2/129 (1%)

Query: 5   IASAHIANSGLAVQSARMQIISEN--IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
             + +I   GLA    R   I E   +  + T G T                +    G  
Sbjct: 416 YNTFNILQDGLAPGVLREFSIDEQGFVIGSYTNGGTRKLWKVAVAIFQDPNGLELVSGGL 475

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
           +++       F  E         A   ++  NV++  E ++M  + R Y A+ + I    
Sbjct: 476 LREAEQSGRPFFREAGTSGTATIAPSSIEQSNVDIGTEFSNMIVSQRSYSASTKVITTVD 535

Query: 123 DMMTTTLDL 131
            M+   +++
Sbjct: 536 QMLNELMNI 544



 Score = 37.9 bits (86), Expect = 0.43,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 16/41 (39%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSD 42
            L  +     SG+  Q + +  IS NI+N  T G      
Sbjct: 1  MSLFGALSTGVSGVIAQGSSLSTISNNISNLNTPGYKGSRT 41


>gi|257871297|ref|ZP_05650950.1| flagellar hook protein [Enterococcus gallinarum EG2]
 gi|257805461|gb|EEV34283.1| flagellar hook protein [Enterococcus gallinarum EG2]
          Length = 312

 Score = 59.1 bits (141), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 20/86 (23%), Positives = 36/86 (41%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
           T +  E +   GG    +     +  V            +G ++  NV++  E  +M   
Sbjct: 227 TFNNPEGLEKVGGNNYVQTSNSGNPIVAGPGNNGAGTLQAGALEMSNVDLSTEFTEMIIA 286

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
           +R Y AN ++I  S +M+   L+L R
Sbjct: 287 SRAYQANSRSITTSDEMLQELLNLKR 312



 Score = 34.1 bits (76), Expect = 6.9,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 21/57 (36%)

Query: 3  YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
           ++ S +   SG+     +M ++S NIAN  T G       ++             G
Sbjct: 14 SMLRSLYSGVSGMKNLQTKMDVVSNNIANVNTVGFKSSRVLFQDMMSQTMSNATAPG 70


>gi|281411901|ref|YP_003345980.1| fagellar hook-basal body protein [Thermotoga naphthophila RKU-10]
 gi|281373004|gb|ADA66566.1| fagellar hook-basal body protein [Thermotoga naphthophila RKU-10]
          Length = 755

 Score = 59.1 bits (141), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 22/47 (46%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NV++  E   M    R + AN + I  +  ++   +++ R
Sbjct: 709 PGALEMSNVDLAEEFTKMIVAQRGFQANARVITTADQILNELVNIKR 755


>gi|301168104|emb|CBW27690.1| putative flagellar hook protein [Bacteriovorax marinus SJ]
          Length = 426

 Score = 59.1 bits (141), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 15/105 (14%), Positives = 36/105 (34%)

Query: 29  IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASG 88
           +      G++              E +   G   +K+        + +          S 
Sbjct: 322 LTAVYDNGESRDISQIAVAKFENNEGLFKVGKNLMKESRNSGEAAMGKPGESGRGEVLSK 381

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NV++  E   +    R + AN +T+  + +M+   L++ R
Sbjct: 382 SIELSNVDIANEFVGLMTAQRNFQANAKTLTTADEMLQQVLNIKR 426



 Score = 38.7 bits (88), Expect = 0.28,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 21/44 (47%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
            ++ S +I  +GL      M +I +NIANA T G       ++
Sbjct: 1  MGILRSFNIGVTGLNAVGQGMGVIGDNIANAGTNGFKSSRAEFQ 44


>gi|70729006|ref|YP_258740.1| flagellar basal body rod protein FlgG [Pseudomonas fluorescens
           Pf-5]
 gi|68343305|gb|AAY90911.1| flagellar basal-body rod protein FlgG [Pseudomonas fluorescens
           Pf-5]
          Length = 261

 Score = 59.1 bits (141), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 16/124 (12%), Positives = 35/124 (28%), Gaps = 3/124 (2%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            L  +  + N        +   +S  IA       +      +         +   G   
Sbjct: 135 ALEPAVVVPNDAQTFTVGQDGTVSITIA---GNPASQVIGNLQTADFINPAGLQAQGNNL 191

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
             +     +  +               ++  NV+ + E  +M  T R Y  N + I  + 
Sbjct: 192 FLETAASGAPQIGTPGLNGFGTTLQNTLEASNVSTVEEMVNMITTQRAYEMNSKVISTAD 251

Query: 123 DMMT 126
            M++
Sbjct: 252 QMLS 255



 Score = 41.8 bits (96), Expect = 0.036,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 23/42 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ +  +A +GL+ Q   + +IS N+AN  TTG       ++
Sbjct: 1  MLPALWVAKTGLSAQDTNLTVISNNLANVSTTGFKRDRAEFQ 42


>gi|291562027|emb|CBL40843.1| fagellar hook-basal body proteins [butyrate-producing bacterium
           SS3/4]
          Length = 305

 Score = 59.1 bits (141), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 22/102 (21%), Positives = 40/102 (39%), Gaps = 1/102 (0%)

Query: 33  RTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVAN-ASGIVK 91
              G T         T    E +   G         D S       PG   ++  +G ++
Sbjct: 204 DKDGKTVSIGKVAIATFQNPEGLSKKGSFYYGAAESDNSGNASATIPGGSTSSLMTGYLE 263

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             NV++  E +DM  T R + AN + I  S ++++  +++ R
Sbjct: 264 ASNVDLAKEFSDMITTQRGFQANSKIITVSDEILSDLINMKR 305



 Score = 43.7 bits (101), Expect = 0.008,   Method: Composition-based stats.
 Identities = 19/99 (19%), Positives = 32/99 (32%), Gaps = 3/99 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           ++ +   A SGL     ++ +I  NIAN  T G    S    ++ +         G    
Sbjct: 1   MLRAMDSAVSGLRAHQNKLDVIGNNIANVNTFGFKSQS-YSFKEAMYQTSTTSTKGSENA 59

Query: 64  KKIGVDQSTFVEEFDPGHPV--ANASGIVKYPNVNVLVE 100
             +   Q  +            A+    V   N +V  E
Sbjct: 60  GGVNAAQYGYGSMMGSISTDMSASTPTYVGGLNASVDGE 98


>gi|58426792|gb|AAW75829.1| flagellar biosynthesis cell-distal portion of basal-body rod
           [Xanthomonas oryzae pv. oryzae KACC10331]
          Length = 341

 Score = 59.1 bits (141), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 18/128 (14%), Positives = 31/128 (24%), Gaps = 3/128 (2%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            L     +     ++       IS  +A                        +   G   
Sbjct: 215 PLQPGIQVPEGAQSLTIGNDGTISVTLA---GQAAAQEIGALTLTDFINPSGLQSKGENL 271

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
             +                      G ++  NVN + E   M ET R Y  N + I  + 
Sbjct: 272 FVETTASGPAQNGTPGLNGLGNTVQGALEGSNVNTVEELVSMIETQRAYEMNAKAISTTD 331

Query: 123 DMMTTTLD 130
            M+    +
Sbjct: 332 AMLGYLNN 339



 Score = 46.4 bits (108), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 21/41 (51%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
           +  +  +A +GL  Q  RM +IS N+AN  TTG       +
Sbjct: 81  MNQALWVAKTGLDAQQTRMSVISNNLANTNTTGFKRDRAAF 121


>gi|225377358|ref|ZP_03754579.1| hypothetical protein ROSEINA2194_03006 [Roseburia inulinivorans DSM
           16841]
 gi|225210783|gb|EEG93137.1| hypothetical protein ROSEINA2194_03006 [Roseburia inulinivorans DSM
           16841]
          Length = 271

 Score = 59.1 bits (141), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 21/47 (44%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NV V  E  ++    R Y  N + I  S DM+    +L R
Sbjct: 225 QGYLEGSNVQVADEMVNLIVAQRAYQLNSKAITTSDDMLEQANNLKR 271



 Score = 41.0 bits (94), Expect = 0.052,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 25/64 (39%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ + + A SG+  Q   +  IS NIAN  TT        ++       +    S     
Sbjct: 1  MMRALYTAASGMRAQQTNVDNISNNIANVNTTAFKSQKTEFKSLLYQTIQTRTTSANGEE 60

Query: 64 KKIG 67
          K IG
Sbjct: 61 KPIG 64


>gi|206558970|ref|YP_002229730.1| flagellar basal body rod protein FlgG [Burkholderia cenocepacia
           J2315]
 gi|198035007|emb|CAR50879.1| flagellar basal-body rod protein FlgG (distal rod protein)
           [Burkholderia cenocepacia J2315]
          Length = 262

 Score = 59.1 bits (141), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 18/88 (20%), Positives = 31/88 (35%)

Query: 45  RRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
           +  T      +   G     +     +  V +           G V+  NVNV+ E  +M
Sbjct: 174 QIATFINPAGLEAKGENLFAETTSSGAPNVSQPGLNGAGVLNQGYVEASNVNVVQELVNM 233

Query: 105 RETNRLYMANLQTIKQSHDMMTTTLDLL 132
            +T R Y  N + +  S  M+ T   + 
Sbjct: 234 IQTQRAYEINSKAVTTSDQMLQTVTQMK 261



 Score = 40.6 bits (93), Expect = 0.068,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 22/41 (53%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  S +IA +G+  Q A+M +IS N+AN  T G       +
Sbjct: 1  MNRSLYIAATGMNAQQAQMDVISNNLANTSTNGFKASRAVF 41


>gi|241589579|ref|YP_002979604.1| protein of unknown function DUF1078 domain protein [Ralstonia
           pickettii 12D]
 gi|240868291|gb|ACS65950.1| protein of unknown function DUF1078 domain protein [Ralstonia
           pickettii 12D]
          Length = 401

 Score = 59.1 bits (141), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 21/83 (25%), Positives = 33/83 (39%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
               E +   GG +  +     S  +     G      S  V+  NV++ VE  +M    
Sbjct: 318 FKAPEGLQNIGGNQWVETANSGSPNLGTPGMGSFGLLRSSAVEQSNVDLSVELVNMIVAQ 377

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y AN QTIK    ++ T + +
Sbjct: 378 RSYQANAQTIKTEDSLLQTLVSI 400


>gi|157959900|ref|YP_001499934.1| flagellar basal-body rod protein FlgG [Shewanella pealeana ATCC
           700345]
 gi|157844900|gb|ABV85399.1| flagellar basal-body rod protein FlgG [Shewanella pealeana ATCC
           700345]
          Length = 261

 Score = 59.1 bits (141), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 43/128 (33%), Gaps = 3/128 (2%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            L+ +  I +  L V  A   I+S  +A      D+           +    +   G   
Sbjct: 135 PLVPNIQIPDEALTVTIASDGIVSAQMA---GQADSQELGQITLVNFTNPAGLEARGSNL 191

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
            ++ G   +                G ++  NVNV+ E  +M  T R Y  N + +  S 
Sbjct: 192 YRETGASGAAIEGIAGDEALGQVRQGALEGANVNVVEEMVEMISTQRAYEMNAKVVSASD 251

Query: 123 DMMTTTLD 130
           DM+     
Sbjct: 252 DMLKFLNQ 259



 Score = 42.2 bits (97), Expect = 0.022,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 21/41 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          + ++  ++ +GL  Q  +M  I+ N+AN  TTG       +
Sbjct: 1  MQSALWVSKTGLTAQDTKMTTIANNLANVNTTGFKRDRVAF 41


>gi|150388210|ref|YP_001318259.1| hypothetical protein Amet_0370 [Alkaliphilus metalliredigens QYMF]
 gi|149948072|gb|ABR46600.1| protein of unknown function DUF1078 domain protein [Alkaliphilus
           metalliredigens QYMF]
          Length = 264

 Score = 59.1 bits (141), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 20/105 (19%), Positives = 37/105 (35%), Gaps = 1/105 (0%)

Query: 29  IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASG 88
           I      GD    D  +       + +   G    K+          E + G   +   G
Sbjct: 161 ITAENEFGDIEELDTIKLVKFLNPQGLESVGRNLYKETVASGEEIPMEGE-GRTSSILQG 219

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NV ++ E   M    R Y  + +TI+ + +M+    +L R
Sbjct: 220 FLETSNVQIVDEMVKMITAQRAYETSSKTIQTADEMLGMANNLRR 264



 Score = 44.1 bits (102), Expect = 0.006,   Method: Composition-based stats.
 Identities = 10/58 (17%), Positives = 23/58 (39%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
          + +   A SG+  Q   +  ++ N+AN  TT        ++    +  +  + + G  
Sbjct: 1  MRALWTAASGMKAQQLNIDTVANNMANVNTTAYKAQRTEFKDLLYANMKRTNLNNGQG 58


>gi|115353116|ref|YP_774955.1| flagellar basal body rod protein FlgG [Burkholderia ambifaria AMMD]
 gi|170703098|ref|ZP_02893918.1| flagellar basal-body rod protein FlgG [Burkholderia ambifaria
           IOP40-10]
 gi|171321840|ref|ZP_02910741.1| flagellar basal-body rod protein FlgG [Burkholderia ambifaria
           MEX-5]
 gi|172061970|ref|YP_001809622.1| flagellar basal body rod protein FlgG [Burkholderia ambifaria
           MC40-6]
 gi|115283104|gb|ABI88621.1| flagellar basal-body rod protein FlgG [Burkholderia ambifaria AMMD]
 gi|170131995|gb|EDT00503.1| flagellar basal-body rod protein FlgG [Burkholderia ambifaria
           IOP40-10]
 gi|171092878|gb|EDT38130.1| flagellar basal-body rod protein FlgG [Burkholderia ambifaria
           MEX-5]
 gi|171994487|gb|ACB65406.1| flagellar basal-body rod protein FlgG [Burkholderia ambifaria
           MC40-6]
          Length = 262

 Score = 59.1 bits (141), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 18/88 (20%), Positives = 31/88 (35%)

Query: 45  RRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
           +  T      +   G     +     +  V +           G V+  NVNV+ E  +M
Sbjct: 174 QIATFINPAGLEAKGENLFAETTSSGAPNVAQPGLNGAGVLNQGYVEASNVNVVQELVNM 233

Query: 105 RETNRLYMANLQTIKQSHDMMTTTLDLL 132
            +T R Y  N + +  S  M+ T   + 
Sbjct: 234 IQTQRAYEINSKAVTTSDQMLQTVTQMK 261



 Score = 40.6 bits (93), Expect = 0.069,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 22/41 (53%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  S +IA +G+  Q A+M +IS N+AN  T G       +
Sbjct: 1  MNRSLYIAATGMNAQQAQMDVISNNLANTSTNGFKASRAVF 41


>gi|23015788|ref|ZP_00055555.1| COG4786: Flagellar basal body rod protein [Magnetospirillum
           magnetotacticum MS-1]
          Length = 261

 Score = 59.1 bits (141), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 18/117 (15%), Positives = 37/117 (31%)

Query: 16  AVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVE 75
                 +    + I        +         T + +  +   GG    +        V+
Sbjct: 145 DAVGVTVDSTGQVIVKQDGQVQSQIKGQLTLATFANDAGLEARGGNLFMETPASGQPVVQ 204

Query: 76  EFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
                       G ++  NVNV+ E  ++    R Y  N + I+ S +M++T   + 
Sbjct: 205 TPGKPGFGTILQGFLETSNVNVVAEVTNLIGAQRAYEMNSKVIQASDEMLSTINQMK 261



 Score = 42.9 bits (99), Expect = 0.015,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 22/41 (53%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          + S +IA +G+  Q   +++IS NIAN  TT  T     + 
Sbjct: 1  MRSLNIAATGMLAQQTNVEVISNNIANMNTTAFTRRRPEFA 41


>gi|222100886|ref|YP_002535454.1| hypothetical protein CTN_1912 [Thermotoga neapolitana DSM 4359]
 gi|221573276|gb|ACM24088.1| Putative uncharacterized protein [Thermotoga neapolitana DSM 4359]
          Length = 759

 Score = 59.1 bits (141), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 19/120 (15%), Positives = 37/120 (30%), Gaps = 8/120 (6%)

Query: 14  GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTF 73
            +  Q   +   S  + +          +           +   S    V KIG   S  
Sbjct: 648 AINEQGEIIGTFSNGLTDVLGQIALAVFNNPAGLMEVGNSLYAVSSNSGVPKIGAPGSGG 707

Query: 74  VEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
                PG         ++  NV++  E   M    R + AN + I  +  ++   +++ R
Sbjct: 708 RGTLIPGA--------LEMSNVDLAEEFTKMIVAQRGFQANARVITTADQILNELVNIKR 759


>gi|94968673|ref|YP_590721.1| flagellar basal body FlaE [Candidatus Koribacter versatilis
           Ellin345]
 gi|94550723|gb|ABF40647.1| flagellar basal body FlaE [Candidatus Koribacter versatilis
           Ellin345]
          Length = 409

 Score = 59.1 bits (141), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 23/44 (52%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  NV++  E +++    R Y AN + I    ++   T++L R
Sbjct: 366 LELSNVDMATEFSNLIVAQRGYQANAKVITTFDEITQDTINLKR 409



 Score = 36.8 bits (83), Expect = 0.94,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 17/41 (41%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          +    I  SGL   S  +  I+ N+AN  T G       +R
Sbjct: 1  MPMFSIPLSGLTASSTALATIANNLANQNTIGYKQTRALFR 41


>gi|83312594|ref|YP_422858.1| flagellar basal body rod protein FlgG [Magnetospirillum magneticum
           AMB-1]
 gi|82947435|dbj|BAE52299.1| Flagellar basal body rod protein [Magnetospirillum magneticum
           AMB-1]
          Length = 261

 Score = 59.1 bits (141), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 18/117 (15%), Positives = 37/117 (31%)

Query: 16  AVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVE 75
                 +    + I        +         T + +  +   GG    +        V+
Sbjct: 145 DAVGVTVDSTGQVIVKQDGQVQSQIKGQLTLATFANDAGLEARGGNLFMETPASGQPVVQ 204

Query: 76  EFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
                       G ++  NVNV+ E  ++    R Y  N + I+ S +M++T   + 
Sbjct: 205 TPGKPGFGTILQGFLETSNVNVVAEVTNLIGAQRAYEMNSKVIQASDEMLSTINQMK 261



 Score = 42.9 bits (99), Expect = 0.016,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 22/41 (53%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          + S +IA +G+  Q   +++IS NIAN  TT  T     + 
Sbjct: 1  MRSLNIAATGMLAQQTNVEVISNNIANMNTTAFTRRRPEFA 41


>gi|332298514|ref|YP_004440436.1| flagellar basal-body rod protein FlgG [Treponema brennaborense DSM
           12168]
 gi|332181617|gb|AEE17305.1| flagellar basal-body rod protein FlgG [Treponema brennaborense DSM
           12168]
          Length = 264

 Score = 59.1 bits (141), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 24/45 (53%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NV+V+ E   M    R Y  + + I+ S  M+++ ++L R
Sbjct: 220 FLEMSNVSVVNEMVQMIVAQRAYEFSSKAIQTSDTMLSSAVNLKR 264



 Score = 38.3 bits (87), Expect = 0.35,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 23/67 (34%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ S   A +G+  Q A +  IS N++N  TTG       +        ++         
Sbjct: 1  MVRSLWTAATGMNGQQANIDAISNNLSNVNTTGYKQQRVEFEDLIYQNLKLAGTPATEDT 60

Query: 64 KKIGVDQ 70
                Q
Sbjct: 61 VTPVGIQ 67


>gi|28211323|ref|NP_782267.1| flagellar hook protein flgE [Clostridium tetani E88]
 gi|28203763|gb|AAO36204.1| flagellar hook protein flgE [Clostridium tetani E88]
          Length = 365

 Score = 59.1 bits (141), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 13/71 (18%), Positives = 31/71 (43%), Gaps = 7/71 (9%)

Query: 70  QSTFVEEFDPGHPVANASGI-------VKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
            + +    DP +  +N  G        ++  NV++  +  +M   +R + AN + I    
Sbjct: 295 DAIYRLGTDPTNDKSNEKGYGDIIQGRLEMSNVDLAEQFTEMIVASRAFQANGKIITTGD 354

Query: 123 DMMTTTLDLLR 133
           +++   ++L R
Sbjct: 355 EILQDLVNLKR 365



 Score = 39.5 bits (90), Expect = 0.14,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 19/43 (44%)

Query: 3  YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          Y++ S     SGL     ++ +I  NIAN  TT        ++
Sbjct: 23 YMLRSMFSGISGLKANQTKLDVIGNNIANVNTTAFKNQRIRFQ 65


>gi|134297196|ref|YP_001120931.1| flagellar basal body rod protein FlgG [Burkholderia vietnamiensis
           G4]
 gi|134140353|gb|ABO56096.1| flagellar basal-body rod protein FlgG [Burkholderia vietnamiensis
           G4]
          Length = 262

 Score = 59.1 bits (141), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 18/88 (20%), Positives = 31/88 (35%)

Query: 45  RRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
           +  T      +   G     +     +  V +           G V+  NVNV+ E  +M
Sbjct: 174 QIATFINPAGLEAKGENLFAETTSSGAPNVSQPGLNGAGVLNQGYVEASNVNVVQELVNM 233

Query: 105 RETNRLYMANLQTIKQSHDMMTTTLDLL 132
            +T R Y  N + +  S  M+ T   + 
Sbjct: 234 IQTQRAYEINSKAVTTSDQMLQTVTQMK 261



 Score = 40.6 bits (93), Expect = 0.069,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 22/41 (53%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  S +IA +G+  Q A+M +IS N+AN  T G       +
Sbjct: 1  MNRSLYIAATGMNAQQAQMDVISNNLANTSTNGFKASRAVF 41


>gi|294013088|ref|YP_003546548.1| flagellar basal-body rod protein FlgG [Sphingobium japonicum UT26S]
 gi|292676418|dbj|BAI97936.1| flagellar basal-body rod protein FlgG [Sphingobium japonicum UT26S]
          Length = 262

 Score = 59.1 bits (141), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 43/128 (33%), Gaps = 3/128 (2%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            LI    +     +V       +S   A  +   +          +      +   GG  
Sbjct: 136 PLIPQITVPEGATSVTIGNDGTVS---ATLQGQTEPTQLGQIELASFMNPGGLTSVGGNL 192

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
           +K+     +  V            +G ++  NVNV+ E  DM ET R Y  N + IK + 
Sbjct: 193 LKESAASGTPQVGVAGLDGRGVVRAGYLETSNVNVVEELVDMIETQRAYEVNSKMIKATD 252

Query: 123 DMMTTTLD 130
           +M+     
Sbjct: 253 EMLQYANQ 260



 Score = 39.5 bits (90), Expect = 0.14,   Method: Composition-based stats.
 Identities = 14/39 (35%), Positives = 24/39 (61%)

Query: 6  ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          A+ H+A +GL  Q+ +M++I+ N+AN  TTG       +
Sbjct: 4  AALHVARTGLDAQNTKMRVIANNLANVNTTGFKRDRADF 42


>gi|326202442|ref|ZP_08192311.1| fagellar hook-basal body protein [Clostridium papyrosolvens DSM
           2782]
 gi|325987560|gb|EGD48387.1| fagellar hook-basal body protein [Clostridium papyrosolvens DSM
           2782]
          Length = 270

 Score = 59.1 bits (141), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 17/97 (17%), Positives = 28/97 (28%)

Query: 37  DTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVN 96
             P        T   +  +   G                  D         G ++  NV 
Sbjct: 174 SVPMDQTIGMVTFPNKYALEAVGNNLYSSNSATGEPLQVSEDENAKSIMKQGFLESSNVQ 233

Query: 97  VLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           V+ E   +    R Y  + + I+ S DM+    +L R
Sbjct: 234 VVDEMVKLIVAQRAYEVSSKAIQSSDDMLQIANNLRR 270



 Score = 44.5 bits (103), Expect = 0.005,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 25/57 (43%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          ++ + + A SG+  Q   + +IS N+AN  TTG       ++       +  +   G
Sbjct: 1  MMRALYTAGSGMKAQQFNVDVISNNLANVNTTGYKKERAEFKDLLYQTMDRAYVLNG 57


>gi|167585196|ref|ZP_02377584.1| flagellar basal-body rod protein FlgG [Burkholderia ubonensis Bu]
          Length = 262

 Score = 59.1 bits (141), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 20/128 (15%), Positives = 43/128 (33%), Gaps = 3/128 (2%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           + +  +  +  A+   +  ++S   A +            +  T      +   G     
Sbjct: 137 LPAITVPQNATALTIGKDGVVSVKQAGSNN---AVQIGSIQIATFINPAGLEAKGENLFA 193

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           +     +  V +       +   G V+  NVNV+ E  +M +T R Y  N + +  S  M
Sbjct: 194 ETTSSGAPNVSQPGLNGAGSLNQGYVEASNVNVVQELVNMIQTQRAYEINSKAVTTSDQM 253

Query: 125 MTTTLDLL 132
           +     + 
Sbjct: 254 LQNVTQMK 261



 Score = 41.0 bits (94), Expect = 0.054,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 22/41 (53%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  S +IA +G+  Q A+M +IS N+AN  T G       +
Sbjct: 1  MNRSLYIAATGMNAQQAQMDVISNNLANVSTNGYKGSRAVF 41


>gi|240144760|ref|ZP_04743361.1| flagellar basal-body rod protein FlgG [Roseburia intestinalis
           L1-82]
 gi|257203281|gb|EEV01566.1| flagellar basal-body rod protein FlgG [Roseburia intestinalis
           L1-82]
 gi|291534610|emb|CBL07722.1| fagellar hook-basal body proteins [Roseburia intestinalis M50/1]
          Length = 272

 Score = 59.1 bits (141), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 20/45 (44%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NV V  E  ++    R Y  N + I  S +M+    +L R
Sbjct: 228 YLEGSNVQVADEMVNLIIAQRAYQLNSKAITTSDEMLEQANNLKR 272



 Score = 36.4 bits (82), Expect = 1.2,   Method: Composition-based stats.
 Identities = 12/63 (19%), Positives = 25/63 (39%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ + + A +G+  Q + +  IS N++N  T G       ++       +    S     
Sbjct: 1  MMRALYTAATGMIAQQSNVDNISNNLSNVNTVGYKQEKMEFKSLLYQTIQTRTTSANGEE 60

Query: 64 KKI 66
          K I
Sbjct: 61 KPI 63


>gi|148256792|ref|YP_001241377.1| flagellar basal body rod protein FlgG [Bradyrhizobium sp. BTAi1]
 gi|146408965|gb|ABQ37471.1| Flagellar basal-body rod protein flgG (Distal rod protein)
           [Bradyrhizobium sp. BTAi1]
          Length = 262

 Score = 59.1 bits (141), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 15/89 (16%), Positives = 32/89 (35%)

Query: 45  RRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
           +      +  +   G  +        +      +     +   G ++  NV+V+ E +++
Sbjct: 174 QLTRFINKAGLQPVGNNQFTDTPSSGAPQDGVANQDGLGSITQGSLEQANVDVVSEMSEL 233

Query: 105 RETNRLYMANLQTIKQSHDMMTTTLDLLR 133
               R Y  N + I  +  MM +T  L R
Sbjct: 234 IAAQRAYEMNAKVISAADQMMQSTTALFR 262



 Score = 37.5 bits (85), Expect = 0.69,   Method: Composition-based stats.
 Identities = 16/41 (39%), Positives = 25/41 (60%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          + + H A +G+A Q   +Q+IS NIAN RTTG    +  ++
Sbjct: 1  MQALHTAATGMAAQELNVQVISNNIANLRTTGFKKQTAAFQ 41


>gi|313905135|ref|ZP_07838504.1| fagellar hook-basal body protein [Eubacterium cellulosolvens 6]
 gi|313470038|gb|EFR65371.1| fagellar hook-basal body protein [Eubacterium cellulosolvens 6]
          Length = 336

 Score = 59.1 bits (141), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/132 (19%), Positives = 48/132 (36%), Gaps = 4/132 (3%)

Query: 6   ASAHIANSGL---AVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            +   A   L   +VQ     II   I N+                   +E +  +G   
Sbjct: 205 NTFSFAGQALQLKSVQVDNDGIIKATINNSNGDAMNVVLGKVAIAAFQNQEGLAKAGNNT 264

Query: 63  VKKIGVDQSTFVEEFDPG-HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
                 D +  +    PG    +   G ++  NV++  E +DM  T R + AN + I  S
Sbjct: 265 FNTRVGDNTGLLTATVPGGATPSLMGGYLEGSNVDLAKEFSDMITTERGFQANAKLITVS 324

Query: 122 HDMMTTTLDLLR 133
            +++   +++ R
Sbjct: 325 DEVLQELVNMKR 336



 Score = 35.6 bits (80), Expect = 2.0,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 20/42 (47%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ +   A SGL     ++ ++  NIAN  T G    +  ++
Sbjct: 1  MLRAMDSAVSGLRSHQNKLDVLGNNIANVNTNGFKSQNYTFK 42


>gi|116691038|ref|YP_836661.1| flagellar basal body rod protein FlgG [Burkholderia cenocepacia
           HI2424]
 gi|170734372|ref|YP_001766319.1| flagellar basal body rod protein FlgG [Burkholderia cenocepacia
           MC0-3]
 gi|254246967|ref|ZP_04940288.1| Flagellar basal body rod protein [Burkholderia cenocepacia PC184]
 gi|116649127|gb|ABK09768.1| flagellar basal-body rod protein FlgG [Burkholderia cenocepacia
           HI2424]
 gi|124871743|gb|EAY63459.1| Flagellar basal body rod protein [Burkholderia cenocepacia PC184]
 gi|169817614|gb|ACA92197.1| flagellar basal-body rod protein FlgG [Burkholderia cenocepacia
           MC0-3]
          Length = 262

 Score = 59.1 bits (141), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 18/88 (20%), Positives = 31/88 (35%)

Query: 45  RRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
           +  T      +   G     +     +  V +           G V+  NVNV+ E  +M
Sbjct: 174 QIATFINPTGLEAKGENLFAETTSSGAPNVSQPGLNGAGVLNQGYVEASNVNVVQELVNM 233

Query: 105 RETNRLYMANLQTIKQSHDMMTTTLDLL 132
            +T R Y  N + +  S  M+ T   + 
Sbjct: 234 IQTQRAYEINSKAVTTSDQMLQTVTQMK 261



 Score = 40.6 bits (93), Expect = 0.065,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 22/41 (53%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  S +IA +G+  Q A+M +IS N+AN  T G       +
Sbjct: 1  MNRSLYIAATGMNAQQAQMDVISNNLANTSTNGFKASRAVF 41


>gi|262273527|ref|ZP_06051341.1| flagellar basal-body rod protein FlgG [Grimontia hollisae CIP
           101886]
 gi|262222505|gb|EEY73816.1| flagellar basal-body rod protein FlgG [Grimontia hollisae CIP
           101886]
          Length = 243

 Score = 59.1 bits (141), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 20/125 (16%), Positives = 44/125 (35%), Gaps = 7/125 (5%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRK--TISFEEVMHGSGG 60
            L+ +  I  + L+    +  I+     N    G+    +  +      +    + G GG
Sbjct: 117 PLVPNIEIPENALSFTVGKDGIV-----NITMPGEAEPQEIGQLTLVNFTNPAGLEGLGG 171

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
              ++ G   +              +   ++  NV+V+ E  +M  T R Y  N + +  
Sbjct: 172 NLFRETGASGAPIEGVPGEEGLGYLSQYALEGSNVSVVEEMVNMITTQRAYEMNAKVVSS 231

Query: 121 SHDMM 125
           +  M+
Sbjct: 232 ADQML 236


>gi|209884526|ref|YP_002288383.1| flagellar basal-body rod protein FlgG [Oligotropha carboxidovorans
           OM5]
 gi|209872722|gb|ACI92518.1| flagellar basal-body rod protein FlgG [Oligotropha carboxidovorans
           OM5]
          Length = 262

 Score = 59.1 bits (141), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 15/87 (17%), Positives = 28/87 (32%)

Query: 47  KTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
                +  +   G                  +         G ++  NV V+ E +D+  
Sbjct: 176 TRFINKAGLQSIGDNLFTDTPASGPPQDGIANTDGFGDIQQGNLEQANVEVVSEISDLIA 235

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
             R Y  N + +  +  MM +T  +LR
Sbjct: 236 AQRAYEMNAKVVSAADQMMQSTTGMLR 262



 Score = 36.0 bits (81), Expect = 1.9,   Method: Composition-based stats.
 Identities = 15/41 (36%), Positives = 24/41 (58%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          + + + A +G+A Q   +Q+IS NIAN RTTG       ++
Sbjct: 1  MRALYTAATGMAAQELSVQVISNNIANLRTTGYKKQMASFQ 41


>gi|167770210|ref|ZP_02442263.1| hypothetical protein ANACOL_01553 [Anaerotruncus colihominis DSM
           17241]
 gi|167667532|gb|EDS11662.1| hypothetical protein ANACOL_01553 [Anaerotruncus colihominis DSM
           17241]
          Length = 556

 Score = 59.1 bits (141), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 19/108 (17%), Positives = 36/108 (33%)

Query: 26  SENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVAN 85
           ++ I  A+  G                + +  +G                        A 
Sbjct: 449 ADGIIRAQNAGKDIIVGRIDLANFDNPQGLDQAGNSYFTATDNSGKAKYAVPGEDGTGAL 508

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            +  ++  NV++  E +DM  T R + AN + I  S  M+   ++L R
Sbjct: 509 KNSALEMSNVDLSQEFSDMIVTQRGFQANSRLITVSDTMLEELINLKR 556



 Score = 34.8 bits (78), Expect = 3.4,   Method: Composition-based stats.
 Identities = 12/58 (20%), Positives = 24/58 (41%), Gaps = 2/58 (3%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
           +   +G+     RM +I  NIAN  T G       +  + + ++ + + S G   + 
Sbjct: 1  MYSGVAGMKSHQQRMDVIGNNIANVNTYGFKSSRVTF--RDMFYQNIRNASAGTSTRG 56


>gi|86150552|ref|ZP_01068776.1| flagellar hook protein FlgE [Campylobacter jejuni subsp. jejuni
           CF93-6]
 gi|85839004|gb|EAQ56269.1| flagellar hook protein FlgE [Campylobacter jejuni subsp. jejuni
           CF93-6]
          Length = 852

 Score = 59.1 bits (141), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/106 (21%), Positives = 39/106 (36%)

Query: 28  NIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANAS 87
           NI    T G T         +++    +   GG   K      +  V E   G      +
Sbjct: 747 NILGEFTNGKTFAVAKIAMASVANNSGLEEIGGNLFKVTANSGAIVVGEAGTGGRGEMKT 806

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             ++  NV++     ++    R Y AN +TI  S  M+ T + L +
Sbjct: 807 SALEMSNVDLSRSLTELIIIQRGYQANSKTISTSDQMLQTLIQLKQ 852



 Score = 35.2 bits (79), Expect = 2.6,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 25/72 (34%), Gaps = 4/72 (5%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR----RKTISFEEVMHGSG 59
          ++ S     SGL      M +   NI+N  TTG       +     +          G G
Sbjct: 1  MMRSLWSGVSGLQAHQVAMDVEGNNISNVNTTGFKYSRADFGTMFSQTVKIATAPTDGRG 60

Query: 60 GVRVKKIGVDQS 71
          G    +IG+  S
Sbjct: 61 GSNPLQIGLGVS 72


>gi|57237001|ref|YP_178802.1| flagellar basal body rod protein FlgG [Campylobacter jejuni RM1221]
 gi|86149818|ref|ZP_01068047.1| flagellar basal-body rod protein FlgG [Campylobacter jejuni subsp.
           jejuni CF93-6]
 gi|86153387|ref|ZP_01071591.1| flagellar basal-body rod protein FlgG [Campylobacter jejuni subsp.
           jejuni HB93-13]
 gi|88597119|ref|ZP_01100355.1| flagellar basal-body rod protein FlgG [Campylobacter jejuni subsp.
           jejuni 84-25]
 gi|121613571|ref|YP_001000394.1| flagellar basal body rod protein FlgG [Campylobacter jejuni subsp.
           jejuni 81-176]
 gi|148926663|ref|ZP_01810344.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni CG8486]
 gi|157414985|ref|YP_001482241.1| flagellar basal body rod protein FlgG [Campylobacter jejuni subsp.
           jejuni 81116]
 gi|167005337|ref|ZP_02271095.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni 81-176]
 gi|205355540|ref|ZP_03222311.1| flagellar basaL body rod protein [Campylobacter jejuni subsp.
           jejuni CG8421]
 gi|218562337|ref|YP_002344116.1| flagellar basal body rod protein FlgG [Campylobacter jejuni subsp.
           jejuni NCTC 11168]
 gi|283956107|ref|ZP_06373594.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni 1336]
 gi|57165805|gb|AAW34584.1| flagellar basal-body rod protein FlgG [Campylobacter jejuni RM1221]
 gi|85839636|gb|EAQ56896.1| flagellar basal-body rod protein FlgG [Campylobacter jejuni subsp.
           jejuni CF93-6]
 gi|85843113|gb|EAQ60324.1| flagellar basal-body rod protein FlgG [Campylobacter jejuni subsp.
           jejuni HB93-13]
 gi|87249438|gb|EAQ72398.1| flagellar basal-body rod protein FlgG [Campylobacter jejuni subsp.
           jejuni 81-176]
 gi|88190808|gb|EAQ94781.1| flagellar basal-body rod protein FlgG [Campylobacter jejuni subsp.
           jejuni 84-25]
 gi|112360043|emb|CAL34835.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni NCTC 11168]
 gi|145845182|gb|EDK22277.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni CG8486]
 gi|157385949|gb|ABV52264.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni 81116]
 gi|205346774|gb|EDZ33406.1| flagellar basaL body rod protein [Campylobacter jejuni subsp.
           jejuni CG8421]
 gi|283792427|gb|EFC31209.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni 1336]
 gi|284925954|gb|ADC28306.1| flagellar basal-body rod protein FlgG [Campylobacter jejuni subsp.
           jejuni IA3902]
 gi|307747622|gb|ADN90892.1| Flagellar basal-body rod protein FlgG [Campylobacter jejuni subsp.
           jejuni M1]
 gi|315058161|gb|ADT72490.1| Flagellar basal-body rod protein flgG [Campylobacter jejuni subsp.
           jejuni S3]
 gi|315926812|gb|EFV06186.1| flagellar basal-body rod protein FlgG [Campylobacter jejuni subsp.
           jejuni DFVF1099]
 gi|315931897|gb|EFV10852.1| flagellar basal-body rod protein FlgG [Campylobacter jejuni subsp.
           jejuni 327]
          Length = 263

 Score = 58.7 bits (140), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 17/86 (19%), Positives = 27/86 (31%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                  +H  G     + G   +                G ++  NV ++ E  D+   
Sbjct: 178 QFINPAGLHSMGDNLYLETGASGAPVAGIAGQDGLGTIRHGFIELSNVQLVEEMTDLITG 237

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y A  + I  S DM+     L R
Sbjct: 238 QRAYEAGSKAITTSDDMLGIVNQLKR 263



 Score = 42.9 bits (99), Expect = 0.015,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 20/42 (47%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S H A +G+  Q  ++ + S NIAN  T G       + 
Sbjct: 1  MMRSLHTAATGMVAQQTQIDVTSNNIANVNTAGFKKSRAEFA 42


>gi|154174905|ref|YP_001408076.1| flagellar basal body rod protein FlgG [Campylobacter curvus 525.92]
 gi|112802860|gb|EAU00204.1| flagellar basal-body rod protein FlgG [Campylobacter curvus 525.92]
          Length = 262

 Score = 58.7 bits (140), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 26/85 (30%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +H  G     +        V             G V+  NV ++ E  D+    
Sbjct: 178 FINPAGLHSMGDNNYLETAASGDAVVGVAGLDGLGTIRQGFVEMSNVQLVEEMTDLITGQ 237

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R Y AN + I  S  M+     L R
Sbjct: 238 RAYEANSKAITTSDSMLEIVNGLKR 262



 Score = 44.5 bits (103), Expect = 0.006,   Method: Composition-based stats.
 Identities = 13/91 (14%), Positives = 28/91 (30%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ S + A +G+  Q  ++ + S NIAN  T G       +        E    +     
Sbjct: 1  MMRSLYTAATGMIAQQTQIDVTSNNIANVNTYGYKKNRAEFADLMYQVMEYAGTATSQTT 60

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIVKYPN 94
                +          + + +     +  N
Sbjct: 61 TSPTGIEVGLGVRPTAINKIFSQGYFKETSN 91


>gi|88799023|ref|ZP_01114604.1| Flagellar basal body rod protein [Reinekea sp. MED297]
 gi|88778250|gb|EAR09444.1| Flagellar basal body rod protein [Reinekea sp. MED297]
          Length = 261

 Score = 58.7 bits (140), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 14/97 (14%), Positives = 27/97 (27%)

Query: 30  ANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGI 89
           A +    D                 +   G     +     +            +   G 
Sbjct: 159 AVSAGDNDPVEIGNIDIVDFVNPAGLQAIGNNLFLETAASGAPAEGVPSLDGFGSIIQGA 218

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           ++  NV ++ E  DM  T R Y  N + +  +  M+ 
Sbjct: 219 LENSNVTIVEEMVDMISTQRAYEMNSKAVSTADQMLG 255



 Score = 39.1 bits (89), Expect = 0.19,   Method: Composition-based stats.
 Identities = 15/92 (16%), Positives = 29/92 (31%), Gaps = 2/92 (2%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR--RKTISFEEVMHGSGGV 61
          +  +  +  +GL  Q   +  IS N+ANA TTG       +      +  +     S   
Sbjct: 1  MHKALWVGKTGLEAQDIALSTISNNLANAATTGYKKERAVFEDLIYQVQRQPGAQSSQNT 60

Query: 62 RVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
          ++       +           V     + + P
Sbjct: 61 QLPSGLQLGTGVRTVGTQKQFVQGDLNMTEQP 92


>gi|116626490|ref|YP_828646.1| flagellar basal-body rod protein FlgG [Candidatus Solibacter
           usitatus Ellin6076]
 gi|116229652|gb|ABJ88361.1| flagellar basal-body rod protein FlgG [Candidatus Solibacter
           usitatus Ellin6076]
          Length = 263

 Score = 58.7 bits (140), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 23/47 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G  +  NV+V+ E  ++    R Y AN + +K + DM     +L R
Sbjct: 217 QGYTEQSNVSVVEEFINLIVAQRGYEANSKVVKAADDMYQQVNNLTR 263



 Score = 42.2 bits (97), Expect = 0.028,   Method: Composition-based stats.
 Identities = 15/91 (16%), Positives = 28/91 (30%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I + + A SG+  Q   +  I+ N+ANA T G       ++            + G + 
Sbjct: 1  MIRALYSAASGMTAQQLNVDNIAHNLANANTAGYKMRRAQFQDLIYQTVVQPGSASGQQT 60

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIVKYPN 94
                Q            +       +  N
Sbjct: 61 TVPTGLQVGLGTRTSSNEILFTQGSFAQTDN 91


>gi|107023951|ref|YP_622278.1| flagellar basal body rod protein FlgG [Burkholderia cenocepacia AU
           1054]
 gi|105894140|gb|ABF77305.1| Flagellar basal-body rod FlgG [Burkholderia cenocepacia AU 1054]
          Length = 262

 Score = 58.7 bits (140), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 18/88 (20%), Positives = 31/88 (35%)

Query: 45  RRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
           +  T      +   G     +     +  V +           G V+  NVNV+ E  +M
Sbjct: 174 QIATFINPTGLEAKGENLFAETTSSGAPNVSQPGLNGAGVLNQGYVEASNVNVVQELVNM 233

Query: 105 RETNRLYMANLQTIKQSHDMMTTTLDLL 132
            +T R Y  N + +  S  M+ T   + 
Sbjct: 234 IQTQRAYEINSKAVTTSDQMLQTVTQMK 261



 Score = 39.5 bits (90), Expect = 0.16,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 22/41 (53%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  S +IA +G+  Q A+M +IS N+AN  T G       +
Sbjct: 1  MNRSLYIAAAGMNAQQAQMDVISNNLANTSTNGFKASRAVF 41


>gi|78067835|ref|YP_370604.1| flagellar basal body rod protein FlgG [Burkholderia sp. 383]
 gi|77968580|gb|ABB09960.1| conserved hypothetical protein [Burkholderia sp. 383]
          Length = 262

 Score = 58.7 bits (140), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 19/128 (14%), Positives = 45/128 (35%), Gaps = 3/128 (2%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           + +  I  +  ++   +  +++   A    + ++      +  T      +   G     
Sbjct: 137 LPAITIPQNATSLTIGKDGVVTVTQA---GSTNSVQIGSLQVATFINPAGLEARGENLFS 193

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           +     +  V +         +   V+  NVNV+ E  +M +T R Y  N + +  S  M
Sbjct: 194 ETTSSGAPNVSQPGLNGAGTLSQNYVESSNVNVVQELVNMIQTQRAYEINSKAVTTSDQM 253

Query: 125 MTTTLDLL 132
           + T   + 
Sbjct: 254 LQTVTQMK 261



 Score = 40.2 bits (92), Expect = 0.085,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 22/41 (53%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  S +IA +G+  Q A+M +IS N+AN  T G       +
Sbjct: 1  MNRSLYIAATGMNAQQAQMDVISNNLANTSTNGFKASRAVF 41


>gi|284926913|gb|ADC29265.1| flagellar hook protein FlgE [Campylobacter jejuni subsp. jejuni
           IA3902]
          Length = 852

 Score = 58.7 bits (140), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/106 (21%), Positives = 39/106 (36%)

Query: 28  NIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANAS 87
           NI    T G T         +++    +   GG   K      +  V E   G      +
Sbjct: 747 NILGEFTNGKTFAVAKIAMASVANNSGLEEIGGNLFKVTANSGAIVVGEAGTGGRGEMKT 806

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             ++  NV++     ++    R Y AN +TI  S  M+ T + L +
Sbjct: 807 SALEMSNVDLSRSLTELIIIQRGYQANSKTISTSDQMLQTLIQLKQ 852



 Score = 35.2 bits (79), Expect = 2.8,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 25/72 (34%), Gaps = 4/72 (5%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR----RKTISFEEVMHGSG 59
          ++ S     SGL      M +   NI+N  TTG       +     +          G G
Sbjct: 1  MMRSLWSGVSGLQAHQVAMDVEGNNISNVNTTGFKYSRADFGTMFSQTVKIATAPTDGRG 60

Query: 60 GVRVKKIGVDQS 71
          G    +IG+  S
Sbjct: 61 GSNPLQIGLGVS 72


>gi|49082998|gb|AAT50899.1| PA1082 [synthetic construct]
          Length = 262

 Score = 58.7 bits (140), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 27/78 (34%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +   G     + G   +  V           A   ++  NVNV+ E  +M  T 
Sbjct: 178 FINPAGLQAIGNNLFLETGSSGAPQVGTPGLNGLGTVAQNTLENSNVNVVEELVNMITTQ 237

Query: 109 RLYMANLQTIKQSHDMMT 126
           R Y  N + I  +  M++
Sbjct: 238 RAYEMNSKVISTADQMLS 255



 Score = 42.6 bits (98), Expect = 0.019,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 23/42 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++++  ++ +GL+ Q   +  IS N+AN  TTG       ++
Sbjct: 1  MLSALWVSKTGLSAQGMNLTTISNNLANVSTTGFKRDRAEFQ 42


>gi|150021173|ref|YP_001306527.1| hypothetical protein Tmel_1293 [Thermosipho melanesiensis BI429]
 gi|149793694|gb|ABR31142.1| protein of unknown function DUF1078 domain protein [Thermosipho
           melanesiensis BI429]
          Length = 705

 Score = 58.7 bits (140), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 21/111 (18%), Positives = 41/111 (36%), Gaps = 2/111 (1%)

Query: 25  ISEN--IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHP 82
           I+EN  I    + G T           +    +  +G     K     S  + +   G  
Sbjct: 595 IAENGDIIGTFSNGLTDKLGKVALAIFNNPAGLLEAGNSLYTKSANSGSAIIRQPGFGGA 654

Query: 83  VANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            A  SG ++  NV++  E   +    R + AN + +  +  ++   ++L R
Sbjct: 655 GALISGALEMSNVDLSEEFTKLIIAQRGFQANARVVTTADQILQEVVNLRR 705



 Score = 33.7 bits (75), Expect = 9.6,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 17/42 (40%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          +I S +   +GL      + ++  NIAN  T G       Y 
Sbjct: 1  MIRSIYSGVTGLQGFQQAIDVVGNNIANVSTIGFKASRVTYA 42


>gi|88811803|ref|ZP_01127057.1| hypothetical protein NB231_05340 [Nitrococcus mobilis Nb-231]
 gi|88791194|gb|EAR22307.1| hypothetical protein NB231_05340 [Nitrococcus mobilis Nb-231]
          Length = 261

 Score = 58.7 bits (140), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 39/124 (31%), Gaps = 3/124 (2%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            L  + +I  +  +V       +S  +     +         R         +   G   
Sbjct: 135 PLQPAINIPPNAQSVTIGTDGTVSVQL---PGSPAPTQVGNLRLTDFINPAGLKPIGRNL 191

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
             + G   +               +G ++  NVN+  E  +M ET R +  N + I+ + 
Sbjct: 192 FVQTGASGAPQPGTPGLNGLGLVQAGALESSNVNIAEELVNMIETQRGFETNTRAIQTAD 251

Query: 123 DMMT 126
            M+ 
Sbjct: 252 QMLQ 255



 Score = 45.6 bits (106), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  +  +A +GL  Q  RM  ++ N+AN  TTG       +
Sbjct: 1  MNPALWVAKTGLDAQQTRMSTVANNLANVNTTGFKKDRAKF 41


>gi|269792757|ref|YP_003317661.1| flagellar basal-body rod protein FlgG [Thermanaerovibrio
           acidaminovorans DSM 6589]
 gi|269100392|gb|ACZ19379.1| flagellar basal-body rod protein FlgG [Thermanaerovibrio
           acidaminovorans DSM 6589]
          Length = 262

 Score = 58.7 bits (140), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 15/86 (17%), Positives = 28/86 (32%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                  +   G     +     +  V               ++  NV V+ E  +M   
Sbjct: 177 RFVNPGGLKALGKNLFIETPASGAPIVGNPGEEGLGTTIQRTLEMANVQVVEEMVNMIVA 236

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y AN +TI  + +++    +L R
Sbjct: 237 QRAYEANSKTIATADELLRIANNLRR 262



 Score = 39.9 bits (91), Expect = 0.12,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 19/42 (45%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          +I S     +G+  Q   + ++S N+AN  T G       ++
Sbjct: 1  MIRSLWSGATGMIAQQTNLDVVSHNLANVNTAGFKKLRADFQ 42


>gi|118475525|ref|YP_892884.1| flagellar hook protein FlgE [Campylobacter fetus subsp. fetus
           82-40]
 gi|118414751|gb|ABK83171.1| flagellar hook protein FlgE [Campylobacter fetus subsp. fetus
           82-40]
          Length = 911

 Score = 58.7 bits (140), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 20/105 (19%), Positives = 35/105 (33%)

Query: 29  IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASG 88
           I  A T G + G         +  E +   GG    +     +  +            + 
Sbjct: 807 IIGAFTNGRSFGLAQVALAKFTNNEGLESDGGNVFVQTANSGAPVIGSAQTAGRGKINAS 866

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NV++      +    R Y AN +TI     M+ T L L +
Sbjct: 867 SLEMSNVDLSRSLTQLIVVQRGYQANSKTITTGDQMLNTLLQLKQ 911



 Score = 34.8 bits (78), Expect = 3.8,   Method: Composition-based stats.
 Identities = 11/58 (18%), Positives = 19/58 (32%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
          ++ +     +GL      M +  +NIAN  T G       +        +V     G 
Sbjct: 1  MMRALWAGVTGLQAHQIAMDVEGDNIANVNTVGFKYSRASFADLFSQTAKVATAPQGD 58


>gi|38570330|gb|AAR24613.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni]
          Length = 263

 Score = 58.7 bits (140), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 17/86 (19%), Positives = 27/86 (31%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                  +H  G     + G   +                G ++  NV ++ E  D+   
Sbjct: 178 QFINPAGLHSMGDNLYLETGASGAPVAGIAGQDGLGTIRHGFIELSNVQLVEEMTDLITG 237

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y A  + I  S DM+     L R
Sbjct: 238 QRAYEAGSKAITTSDDMLGIVNQLKR 263



 Score = 43.3 bits (100), Expect = 0.010,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 20/42 (47%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S H A +G+  Q  ++ + S NIAN  T G       + 
Sbjct: 1  MMRSLHTAATGMVAQQTQIDVTSNNIANVNTAGFKESRAEFA 42


>gi|77165836|ref|YP_344361.1| hypothetical protein Noc_2373 [Nitrosococcus oceani ATCC 19707]
 gi|254434083|ref|ZP_05047591.1| flagellar basal-body rod protein FlgG [Nitrosococcus oceani AFC27]
 gi|76884150|gb|ABA58831.1| conserved hypothetical protein [Nitrosococcus oceani ATCC 19707]
 gi|207090416|gb|EDZ67687.1| flagellar basal-body rod protein FlgG [Nitrosococcus oceani AFC27]
          Length = 261

 Score = 58.7 bits (140), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 41/123 (33%), Gaps = 3/123 (2%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            +     I  S L+V      I+S  +A     G    +   +         +  +G   
Sbjct: 135 PVQPGITIPESALSVTVGSDGIVSVLMA---GDGTPIQAGNLQLADFINPAGLQPTGNNL 191

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
            K+                      G ++  NVNV+ E  +M ET R Y  N + I  + 
Sbjct: 192 FKETASSGVAQTGIPGLNGIGTLVQGALEGANVNVVEELVNMIETQRAYEMNSKAISSTD 251

Query: 123 DMM 125
           +M+
Sbjct: 252 EML 254



 Score = 46.4 bits (108), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/41 (36%), Positives = 20/41 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  +  IA +GL  Q  RM  IS N+AN  TTG       +
Sbjct: 1  MNQALWIAKTGLDAQQTRMATISNNLANVNTTGFKRDRAVF 41


>gi|212639558|ref|YP_002316078.1| flagellar hook protein FlgE [Anoxybacillus flavithermus WK1]
 gi|212561038|gb|ACJ34093.1| Flagellar hook protein FlgE [Anoxybacillus flavithermus WK1]
          Length = 460

 Score = 58.7 bits (140), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 23/44 (52%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  NV++  E  +M    R + AN + I  S +++   ++L +
Sbjct: 417 LEMSNVDLSEEFTEMIVAQRGFQANTRIITTSDEILQELVNLKK 460


>gi|149182512|ref|ZP_01860985.1| flagellar hook protein [Bacillus sp. SG-1]
 gi|148849772|gb|EDL63949.1| flagellar hook protein [Bacillus sp. SG-1]
          Length = 396

 Score = 58.7 bits (140), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 18/100 (18%), Positives = 37/100 (37%), Gaps = 1/100 (1%)

Query: 34  TTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
           + G+            S    +  +GG   ++     +  V            SG ++  
Sbjct: 298 SNGEITTIGYLALAKFSNPSGLTKAGGNSFQQSVNSGTPNVNVAG-EGRGTIVSGSLEMS 356

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           NV++  E  +M    R + AN + I  S +++   ++L R
Sbjct: 357 NVDLSEEFTEMISAQRGFQANTRIITTSDEILQELVNLKR 396


>gi|238752865|ref|ZP_04614330.1| Lateral flagellar rod protein (FlgG-like) [Yersinia rohdei ATCC
           43380]
 gi|238708904|gb|EEQ01157.1| Lateral flagellar rod protein (FlgG-like) [Yersinia rohdei ATCC
           43380]
          Length = 261

 Score = 58.7 bits (140), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 25/77 (32%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +   GG   K+     +                G ++  NV V+ E  DM    
Sbjct: 178 FVNPAGLEAVGGNMYKETVASGTAVEGVPGEEAFGQLEHGSLEGSNVQVVEEMVDMITVQ 237

Query: 109 RLYMANLQTIKQSHDMM 125
           R Y  N + +  + DM+
Sbjct: 238 RAYEMNAKMVSAADDML 254



 Score = 42.2 bits (97), Expect = 0.027,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 21/41 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  +  ++ +GLA Q A+M  IS N+AN  T G       +
Sbjct: 1  MNPALWVSKTGLAAQDAKMNAISNNLANVNTDGFKRDRVVF 41


>gi|187926952|ref|YP_001893297.1| flagellar basal-body rod protein FlgG [Ralstonia pickettii 12J]
 gi|241665281|ref|YP_002983640.1| flagellar basal-body rod protein FlgG [Ralstonia pickettii 12D]
 gi|187728706|gb|ACD29870.1| flagellar basal-body rod protein FlgG [Ralstonia pickettii 12J]
 gi|240867308|gb|ACS64968.1| flagellar basal-body rod protein FlgG [Ralstonia pickettii 12D]
          Length = 260

 Score = 58.7 bits (140), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 15/95 (15%), Positives = 31/95 (32%)

Query: 37  DTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVN 96
           +      ++         +   G     +     +  +               V+  NVN
Sbjct: 166 NNTQVGTFQLANFINPAGLRSMGENLYAETEASGTANLANPGSNGVGVLNQNYVETSNVN 225

Query: 97  VLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           V+ E  +M +T R Y  N ++++ S  M+     L
Sbjct: 226 VVEEMVNMIQTQRAYEINSKSVQTSDQMLEKLSQL 260



 Score = 41.8 bits (96), Expect = 0.033,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 23/41 (56%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I S  I+ +G+  Q +++ +IS N+AN  TTG       +
Sbjct: 1  MIRSLWISKTGMDAQQSQLDVISNNLANVNTTGFKRSRAVF 41


>gi|220932517|ref|YP_002509425.1| flagellar hook protein FlgE, epsilon proteobacterial
           [Halothermothrix orenii H 168]
 gi|219993827|gb|ACL70430.1| flagellar hook protein FlgE, epsilon proteobacterial
           [Halothermothrix orenii H 168]
          Length = 519

 Score = 58.7 bits (140), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 30/85 (35%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +   G              + E   G     + G ++  NV++  +  DM  T 
Sbjct: 435 FVNPSGLMKEGETLFSPSENSGDPQIGEAGSGGRGKISVGNLEMSNVDLAEQFTDMITTQ 494

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R + AN + I  +  M+   ++L R
Sbjct: 495 RGFQANSKIITTTDQMLQDLVNLKR 519



 Score = 43.3 bits (100), Expect = 0.011,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 22/59 (37%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
          ++ S +   SGL     RM +I  NIAN  T G    S  ++              G R
Sbjct: 1  MMRSMYAGVSGLKAHQTRMDVIGNNIANVNTVGYKSSSVTFKEMLSQTLRGAKAPQGGR 59


>gi|307731361|ref|YP_003908585.1| flagellar basal-body rod protein FlgG [Burkholderia sp. CCGE1003]
 gi|307585896|gb|ADN59294.1| flagellar basal-body rod protein FlgG [Burkholderia sp. CCGE1003]
          Length = 262

 Score = 58.7 bits (140), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 22/127 (17%), Positives = 46/127 (36%), Gaps = 3/127 (2%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           I +  + ++  ++       +S ++A    + +T      +  T      +   G     
Sbjct: 137 IPAITVPSNATSLTIGSDGAVSISVA---GSTNTQQLGTMQLATFINPAGLDAKGENLFA 193

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           +     +  V +           G V+  NVNV+ E  +M +T R Y  N + +  S  M
Sbjct: 194 ETASSGAPNVAQPGLNGAGTLNQGYVEASNVNVVQELVNMIQTQRAYEINSKAVTTSDQM 253

Query: 125 MTTTLDL 131
           + T   +
Sbjct: 254 LQTLSQM 260



 Score = 39.9 bits (91), Expect = 0.11,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 22/41 (53%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  S +IA +G+  Q A+M +IS N+AN  T G       +
Sbjct: 1  MNRSLYIAATGMNAQQAQMDVISNNLANVSTNGFKGSRAVF 41


>gi|218460753|ref|ZP_03500844.1| flagellar basal body rod protein FlgG [Rhizobium etli Kim 5]
          Length = 244

 Score = 58.7 bits (140), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 26/78 (33%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
              E  +   G    ++        V   D         G ++  NV+ + E  ++    
Sbjct: 160 FVNEAGLQPIGDNLFQETAASGEAVVGNPDEEGFGYMKQGYLESSNVDPVKEITELISAQ 219

Query: 109 RLYMANLQTIKQSHDMMT 126
           R Y  N + I  + +M +
Sbjct: 220 RAYEMNSKVITTADEMAS 237


>gi|86151551|ref|ZP_01069765.1| flagellar basal-body rod protein FlgG [Campylobacter jejuni subsp.
           jejuni 260.94]
 gi|85841180|gb|EAQ58428.1| flagellar basal-body rod protein FlgG [Campylobacter jejuni subsp.
           jejuni 260.94]
          Length = 263

 Score = 58.7 bits (140), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 17/86 (19%), Positives = 27/86 (31%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                  +H  G     + G   +                G ++  NV ++ E  D+   
Sbjct: 178 QFINPAGLHSMGDNLYLETGASGAPVAGIAGQDGLGTIRHGFIELSNVQLVEEMTDLITG 237

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y A  + I  S DM+     L R
Sbjct: 238 QRAYEAGSKAITTSDDMLGIVNQLKR 263



 Score = 42.9 bits (99), Expect = 0.016,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 20/42 (47%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S H A +G+  Q  ++ + S NIAN  T G       + 
Sbjct: 1  MMRSLHTAATGMVAQQTQIDVTSNNIANVNTAGFKKSRAEFA 42


>gi|310659037|ref|YP_003936758.1| flagellar hook protein [Clostridium sticklandii DSM 519]
 gi|308825815|emb|CBH21853.1| flagellar hook protein [Clostridium sticklandii]
          Length = 418

 Score = 58.7 bits (140), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 32/85 (37%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +    +   GG   +         V +   G       G ++  NV++  E  +M  T 
Sbjct: 334 FANPAGLVKMGGNLYRSSANSGDPQVNKPGTGGNGGLQPGALEMSNVDLGKEFTNMIVTQ 393

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R + AN + I  +  M+   ++L R
Sbjct: 394 RGFQANSRIISTTDQMLEELVNLKR 418



 Score = 41.0 bits (94), Expect = 0.054,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 19/42 (45%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S + A S L     RM +I  NIAN  T G       ++
Sbjct: 1  MMRSMNSAVSALRNHQLRMDVIGNNIANVNTIGYKSSRVTFK 42


>gi|302389667|ref|YP_003825488.1| fagellar hook-basal body protein [Thermosediminibacter oceani DSM
           16646]
 gi|302200295|gb|ADL07865.1| fagellar hook-basal body protein [Thermosediminibacter oceani DSM
           16646]
          Length = 404

 Score = 58.7 bits (140), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 18/105 (17%), Positives = 34/105 (32%)

Query: 29  IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASG 88
           I      G T           +    +  +G              +     G     + G
Sbjct: 300 ITGVFDNGQTMELAQVALAVFNNPAGLMKAGRNMYTYSNNSGEPQIGLAGTGGRGTISPG 359

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NV++  E   M  T R + AN + I  S +M+   +++ R
Sbjct: 360 SLEMSNVDLAEEFTQMIITQRGFQANSRVITASDEMLQELVNIKR 404



 Score = 36.8 bits (83), Expect = 1.1,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 21/59 (35%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
          ++ S     +GL     +M +I  NIAN  T G       ++            + G R
Sbjct: 1  MMRSMFSGVTGLRNHQIKMDVIGNNIANVNTVGYKKSRVTFQDTLSQTMRGASSAQGNR 59


>gi|94987008|ref|YP_594941.1| flagellar hook protein FlgE [Lawsonia intracellularis PHE/MN1-00]
 gi|94731257|emb|CAJ54620.1| Flagellar hook protein FlgE [Lawsonia intracellularis PHE/MN1-00]
          Length = 690

 Score = 58.7 bits (140), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 12/85 (14%), Positives = 32/85 (37%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            + ++ +   GG    +            +     +  +  ++  NV++  E   M  T 
Sbjct: 606 FNSKQGLRREGGNLFSQTRESGDPSSGAANTSGFGSINANTLEGSNVDISTEFVSMIATQ 665

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R + +N + +     M+ T +++ R
Sbjct: 666 RGFQSNSKIVTTIDQMLETVVNMKR 690



 Score = 36.8 bits (83), Expect = 1.1,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 16/44 (36%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
            L A      SGL     +M +I  NIAN  T G       + 
Sbjct: 1  MSLTAGMWTGVSGLLSHGEKMNVIGNNIANVNTVGFKGQRMDFA 44


>gi|323527711|ref|YP_004229864.1| flagellar basal-body rod protein FlgG [Burkholderia sp. CCGE1001]
 gi|323384713|gb|ADX56804.1| flagellar basal-body rod protein FlgG [Burkholderia sp. CCGE1001]
          Length = 262

 Score = 58.7 bits (140), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 19/100 (19%), Positives = 34/100 (34%)

Query: 32  ARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVK 91
              + +T      +  T      +   G     +     +  V +           G V+
Sbjct: 161 VAGSTNTQQLGTMQLATFINPAGLDAKGENLFAETASSGAPNVAQPGLNGAGTLNQGYVE 220

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             NVNV+ E  +M +T R Y  N + +  S  M+ T   +
Sbjct: 221 ASNVNVVQELVNMIQTQRAYEINSKAVTTSDQMLQTLSQM 260



 Score = 40.2 bits (92), Expect = 0.098,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 22/41 (53%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  S +IA +G+  Q A+M +IS N+AN  T G       +
Sbjct: 1  MNRSLYIAATGMNAQQAQMDVISNNLANVSTNGFKGSRAVF 41


>gi|329849714|ref|ZP_08264560.1| flagellar basal-body rod protein FlgG [Asticcacaulis biprosthecum
           C19]
 gi|328841625|gb|EGF91195.1| flagellar basal-body rod protein FlgG [Asticcacaulis biprosthecum
           C19]
          Length = 263

 Score = 58.7 bits (140), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 16/86 (18%), Positives = 27/86 (31%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
           T   E  +   G     + G   +  V             G  +  NV+ + E   +   
Sbjct: 177 TFFNEAGLDAIGDNLFLESGASGAPNVSTPGDVGFGTLLQGYTEASNVDAVGEITALIVA 236

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y  N + I  +  M+ T   + R
Sbjct: 237 QRAYEMNSKVITTADQMLQTASQIAR 262



 Score = 38.7 bits (88), Expect = 0.26,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 24/62 (38%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          + +   A +G+A Q   +++IS NIAN  T G       ++       E M         
Sbjct: 1  MRALRTATTGMAAQQLNVEVISNNIANMNTVGFKKQRAEFQDLLYQNIERMGSQSSDAGT 60

Query: 65 KI 66
           +
Sbjct: 61 VV 62


>gi|153952075|ref|YP_001398357.1| flagellar basal body rod protein FlgG [Campylobacter jejuni subsp.
           doylei 269.97]
 gi|152939521|gb|ABS44262.1| flagellar basal-body rod protein FlgG [Campylobacter jejuni subsp.
           doylei 269.97]
          Length = 263

 Score = 58.7 bits (140), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 17/86 (19%), Positives = 27/86 (31%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                  +H  G     + G   +                G ++  NV ++ E  D+   
Sbjct: 178 QFINPAGLHSMGDNLYLETGASGAPVAGIAGQDGLGTIRHGFIELSNVQLVEEMTDLITG 237

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y A  + I  S DM+     L R
Sbjct: 238 QRAYEAGSKAITTSDDMLGIVNQLKR 263



 Score = 42.6 bits (98), Expect = 0.021,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 20/42 (47%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S H A +G+  Q  ++ + S NIAN  T G       + 
Sbjct: 1  MMRSLHTAATGMVAQQMQIDVTSNNIANVNTAGFKKSRAEFA 42


>gi|157165544|ref|YP_001467096.1| flagellar basal body rod protein FlgG [Campylobacter concisus
           13826]
 gi|112799947|gb|EAT97291.1| flagellar basal-body rod protein FlgG [Campylobacter concisus
           13826]
          Length = 262

 Score = 58.7 bits (140), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 26/85 (30%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +H  G     +        V             G V+  NV ++ E  D+    
Sbjct: 178 FINPAGLHSMGDNNYLQTSASGDVVVGVAGLDGLGTIRQGFVEMSNVQLVEEMTDLITGQ 237

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R Y AN + I  S  M+     L R
Sbjct: 238 RAYEANSKAITTSDSMLEIVNGLKR 262



 Score = 42.6 bits (98), Expect = 0.019,   Method: Composition-based stats.
 Identities = 12/91 (13%), Positives = 28/91 (30%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ S + A +G+  +  ++ + S NIAN  T G       +        E    +     
Sbjct: 1  MMRSLYTAATGMIAEQTQIDVTSHNIANVNTYGYKKNRAEFADLMYQVMEYAGTATSQTT 60

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIVKYPN 94
                +          + + +     +  N
Sbjct: 61 TSPTGIEVGLGVRPTAINKIFSQGYFKETSN 91


>gi|95929857|ref|ZP_01312598.1| protein of unknown function DUF1078-like [Desulfuromonas
           acetoxidans DSM 684]
 gi|95134153|gb|EAT15811.1| protein of unknown function DUF1078-like [Desulfuromonas
           acetoxidans DSM 684]
          Length = 548

 Score = 58.7 bits (140), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 18/119 (15%), Positives = 38/119 (31%), Gaps = 2/119 (1%)

Query: 17  VQSARMQIISENIANA--RTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFV 74
                + +  +N  N     +   P              V     G  + +   D  T +
Sbjct: 430 ATGTLVSLTVDNDGNILGNYSNGEPRKLARIALAKFSNPVGLAKAGNNLYEATDDSGTAI 489

Query: 75  EEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
                       +  ++  NV++  E   M  T R + AN + I  + +++   ++L R
Sbjct: 490 VGTVGSGVGKIFTNSLEMSNVDLAQEFVKMITTQRGFQANSKIITTTDELLGELINLKR 548


>gi|315125109|ref|YP_004067113.1| flagellar hook protein FlgE [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
 gi|315018831|gb|ADT66924.1| flagellar hook protein FlgE [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
          Length = 855

 Score = 58.7 bits (140), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 23/106 (21%), Positives = 39/106 (36%)

Query: 28  NIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANAS 87
           NI    T G T         +++    +   GG   K      +  V E   G      +
Sbjct: 750 NILGEFTNGKTFAVAKIAMASVANNSGLEEIGGNLFKVTANSGNIVVGEAGTGGRGEMKT 809

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             ++  NV++     ++    R Y AN +TI  S  M+ T + L +
Sbjct: 810 SALEMSNVDLSRSLTELIIIQRGYQANSKTISTSDQMLQTLIQLKQ 855



 Score = 35.6 bits (80), Expect = 2.5,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 25/72 (34%), Gaps = 4/72 (5%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR----RKTISFEEVMHGSG 59
          ++ S     SGL      M +   NI+N  TTG       +     +          G G
Sbjct: 1  MMRSLWSGVSGLQAHQVAMDVEGNNISNVNTTGFKYSRADFGTMFSQTVKIATAPTDGRG 60

Query: 60 GVRVKKIGVDQS 71
          G    +IG+  S
Sbjct: 61 GSNPLQIGLGVS 72


>gi|167037660|ref|YP_001665238.1| hypothetical protein Teth39_1248 [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|320116075|ref|YP_004186234.1| flagellar hook-basal body protein [Thermoanaerobacter brockii
           subsp. finnii Ako-1]
 gi|166856494|gb|ABY94902.1| protein of unknown function DUF1078 domain protein
           [Thermoanaerobacter pseudethanolicus ATCC 33223]
 gi|319929166|gb|ADV79851.1| flagellar hook-basal body protein [Thermoanaerobacter brockii
           subsp. finnii Ako-1]
          Length = 417

 Score = 58.7 bits (140), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 14/85 (16%), Positives = 29/85 (34%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +   G              +         +   G ++  NV++  E  DM  T 
Sbjct: 333 FQNPMGLEKVGNTMFINTVNSGEPMIGAAGTDTRGSINPGTLEMSNVDLANEFTDMIVTQ 392

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R + AN + I  S +++   +++ R
Sbjct: 393 RGFQANARVITASDEILQDLVNMKR 417



 Score = 42.2 bits (97), Expect = 0.022,   Method: Composition-based stats.
 Identities = 15/42 (35%), Positives = 21/42 (50%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S + A SGL    ARM +I  NIAN  T G       ++
Sbjct: 1  MLRSMYSAVSGLKAHQARMDVIGNNIANVNTVGYKASRMTFK 42


>gi|91204383|emb|CAJ70883.1| strongly similar to flagellar distal rod protein [Candidatus
           Kuenenia stuttgartiensis]
          Length = 262

 Score = 58.7 bits (140), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 29/102 (28%)

Query: 32  ARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVK 91
           +  +G                  +   G     +     S  V             G ++
Sbjct: 161 SDPSGTLQNVGQIMLTMFPNPSGLDSLGKNLYLETMASGSPIVTVAGEQGTGEIYQGFLE 220

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             NV  + E   +    R Y  N + I  S +M++T   + R
Sbjct: 221 NSNVETVTELVSLITAQRAYEINSRAISASDEMLSTINSMAR 262



 Score = 38.3 bits (87), Expect = 0.36,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 21/42 (50%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ + + A +G+  Q   +  +S N++N  TTG       ++
Sbjct: 1  MLRALYTAATGMKAQQLFLDNVSNNLSNINTTGFKRSQVNFQ 42


>gi|311105937|ref|YP_003978790.1| flagellar basal-body rod protein FlgG [Achromobacter xylosoxidans
           A8]
 gi|310760626|gb|ADP16075.1| flagellar basal-body rod protein FlgG [Achromobacter xylosoxidans
           A8]
          Length = 261

 Score = 58.7 bits (140), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 41/124 (33%), Gaps = 2/124 (1%)

Query: 8   AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
            +I ++ L++      I+S  +      G        +  T      +   G     +  
Sbjct: 140 MNIPDNALSISIGNDGIVS--VTQPGAAGINVQIGQLQIATFINPTGLQSIGENLYLETD 197

Query: 68  VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
                 + +       +     V+  NVNV  E  +M  T R Y  N + +K S +M+  
Sbjct: 198 ASGPANLLQPGVDGAGSIMQKYVETSNVNVAEELVNMITTQRAYEMNSKAVKTSDEMLAR 257

Query: 128 TLDL 131
              L
Sbjct: 258 LTQL 261



 Score = 41.8 bits (96), Expect = 0.036,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 24/61 (39%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ S  IA +GL  Q   M +IS N+AN  T G   G   ++              G   
Sbjct: 1  MMRSLWIAKTGLEGQQTSMDVISNNLANVSTNGFKRGRAVFQDLMYQTLRQPGAQVGDAT 60

Query: 64 K 64
          +
Sbjct: 61 Q 61


>gi|86152379|ref|ZP_01070589.1| flagellar hook protein FlgE [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|85840676|gb|EAQ57928.1| flagellar hook protein FlgE [Campylobacter jejuni subsp. jejuni
           260.94]
          Length = 854

 Score = 58.7 bits (140), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 23/106 (21%), Positives = 39/106 (36%)

Query: 28  NIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANAS 87
           NI    T G T         +++    +   GG   K      +  V E   G      +
Sbjct: 749 NILGEFTNGKTFAVAKIAMASVANNSGLEEIGGNLFKVTANSGNIVVGEAGTGGRGEMKT 808

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             ++  NV++     ++    R Y AN +TI  S  M+ T + L +
Sbjct: 809 SALEMSNVDLSRSLTELIIIQRGYQANSKTISTSDQMLQTLIQLKQ 854



 Score = 35.6 bits (80), Expect = 2.6,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 25/72 (34%), Gaps = 4/72 (5%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR----RKTISFEEVMHGSG 59
          ++ S     SGL      M +   NI+N  TTG       +     +          G G
Sbjct: 1  MMRSLWSGVSGLQAHQVAMDVEGNNISNVNTTGFKYSRADFGTMFSQTVKIATAPTDGRG 60

Query: 60 GVRVKKIGVDQS 71
          G    +IG+  S
Sbjct: 61 GSNPLQIGLGVS 72


>gi|121596119|ref|YP_988015.1| flagellar basal-body rod protein FlgG [Acidovorax sp. JS42]
 gi|222112274|ref|YP_002554538.1| flagellar basal-body rod protein flgg [Acidovorax ebreus TPSY]
 gi|120608199|gb|ABM43939.1| flagellar basal-body rod protein FlgG [Acidovorax sp. JS42]
 gi|221731718|gb|ACM34538.1| flagellar basal-body rod protein FlgG [Acidovorax ebreus TPSY]
          Length = 260

 Score = 58.7 bits (140), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 17/83 (20%), Positives = 28/83 (33%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +   G    ++     +    E           G ++  NVNV+ E   M +T 
Sbjct: 178 FINSAGLEPVGQNLYRESAASGAPQQAEPGTNGLGIIKQGFLENSNVNVVEELVTMIQTQ 237

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y  N + I+ S  M+     L
Sbjct: 238 RAYEMNSKAIQTSDQMLAKLSQL 260



 Score = 44.5 bits (103), Expect = 0.005,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 23/41 (56%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          ++ S  IA +G+  Q  ++ +IS N+AN  TTG    +  +
Sbjct: 1  MMNSLWIAKTGMTAQQTQLDVISHNLANVSTTGFKRNNAVF 41


>gi|94263287|ref|ZP_01287103.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
 gi|94267694|ref|ZP_01290963.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
 gi|93451896|gb|EAT02627.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
 gi|93456370|gb|EAT06494.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
          Length = 260

 Score = 58.7 bits (140), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 25/79 (31%)

Query: 55  MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
           +   GG   +           +              +  NV V  E  ++  T R +  N
Sbjct: 182 LRAEGGNLFRATEASGDPREADPGTEGVGVLLQRFNEVSNVEVTEELVNLIITQRAFEMN 241

Query: 115 LQTIKQSHDMMTTTLDLLR 133
            ++++ +  ++     L R
Sbjct: 242 SKSVQTADQLLEVANTLKR 260



 Score = 40.2 bits (92), Expect = 0.095,   Method: Composition-based stats.
 Identities = 14/69 (20%), Positives = 26/69 (37%), Gaps = 5/69 (7%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSD-----PYRRKTISFEEVMHGS 58
          +I + +   +G+  Q  ++  IS N+AN  T G            Y+       E + G 
Sbjct: 1  MIRALYSGTTGMRGQQLQLDTISNNLANVNTAGFKKSRTQFEDLYYQELRAVGVENIDGG 60

Query: 59 GGVRVKKIG 67
                ++G
Sbjct: 61 QVPSGMQVG 69


>gi|257866386|ref|ZP_05646039.1| flagellar hook protein [Enterococcus casseliflavus EC30]
 gi|257873098|ref|ZP_05652751.1| flagellar hook protein [Enterococcus casseliflavus EC10]
 gi|257875999|ref|ZP_05655652.1| flagellar hook protein [Enterococcus casseliflavus EC20]
 gi|257800344|gb|EEV29372.1| flagellar hook protein [Enterococcus casseliflavus EC30]
 gi|257807262|gb|EEV36084.1| flagellar hook protein [Enterococcus casseliflavus EC10]
 gi|257810165|gb|EEV38985.1| flagellar hook protein [Enterococcus casseliflavus EC20]
          Length = 312

 Score = 58.3 bits (139), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 20/86 (23%), Positives = 36/86 (41%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
           T +  E +   GG    +     +  V            +G ++  NV++  E  +M   
Sbjct: 227 TFNNPEGLEKVGGNNYIQTSNSGNPIVAGPGNNGAGTLQAGALEMSNVDLSTEFTEMIIA 286

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
           +R Y AN ++I  S +M+   L+L R
Sbjct: 287 SRAYQANSRSITTSDEMLQELLNLKR 312



 Score = 34.1 bits (76), Expect = 7.4,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 21/57 (36%)

Query: 3  YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
           ++ S +   SG+     +M ++S NIAN  T G       ++             G
Sbjct: 14 SMLRSLYSGVSGMKNLQTKMDVVSNNIANVNTVGFKSSRVLFQDMMSQTMSNATAPG 70


>gi|302670255|ref|YP_003830215.1| flagellar hook protein FlgE2 [Butyrivibrio proteoclasticus B316]
 gi|302394728|gb|ADL33633.1| flagellar hook protein FlgE2 [Butyrivibrio proteoclasticus B316]
          Length = 572

 Score = 58.3 bits (139), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 41/111 (36%), Gaps = 1/111 (0%)

Query: 24  IISENIANARTTGDTPGSDPYRRKTISFEEVMH-GSGGVRVKKIGVDQSTFVEEFDPGHP 82
            IS+N +      +       +     F   M     G  V K  ++    +        
Sbjct: 462 TISDNGSIYAKYSNGQDVKLAQIVVAEFNNAMGLEKAGDNVYKASLNSGEPIYMDITEDG 521

Query: 83  VANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
              +SG+++  NV++  E  DM  T R + AN + I  S +++     L R
Sbjct: 522 GYMSSGVLEASNVDLAKEFTDMITTQRGFQANSRVITTSDELLQVLKGLKR 572



 Score = 39.1 bits (89), Expect = 0.19,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 19/42 (45%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S   A SGL      M +I  NIAN  TT     +  ++
Sbjct: 1  MMRSLWSAVSGLQTHQLEMDVIGNNIANVNTTSYKSQATGFQ 42


>gi|238028847|ref|YP_002913078.1| flagellar basal body rod protein FlgG [Burkholderia glumae BGR1]
 gi|237878041|gb|ACR30374.1| Flagellar basal-body rod protein [Burkholderia glumae BGR1]
          Length = 262

 Score = 58.3 bits (139), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 32/85 (37%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
           T    E ++  G     +     +  V         +   G V+  NVNV+ E  +M +T
Sbjct: 177 TFINPEGLNALGQNLFAETTSSGAPNVTTPGLNGAGSLNQGYVESSNVNVVQELVNMIQT 236

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLL 132
            R Y  N + +  S  M+ T   + 
Sbjct: 237 QRAYEINSKAVTTSDQMLQTVTQMK 261



 Score = 40.2 bits (92), Expect = 0.082,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 22/41 (53%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  S +IA +G+  Q A+M +IS N+AN  T G       +
Sbjct: 1  MNRSLYIAATGMNAQQAQMDVISNNLANVSTNGFKGSRAVF 41


>gi|170694394|ref|ZP_02885548.1| flagellar basal-body rod protein FlgG [Burkholderia graminis C4D1M]
 gi|170140817|gb|EDT08991.1| flagellar basal-body rod protein FlgG [Burkholderia graminis C4D1M]
          Length = 262

 Score = 58.3 bits (139), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 18/87 (20%), Positives = 31/87 (35%)

Query: 45  RRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
           +  T      +   G     +     +  V +           G V+  NVNV+ E  +M
Sbjct: 174 QIATFINPAGLDAKGENLFAETASSGAPNVAQPGLNGAGTLNQGYVEASNVNVVQELVNM 233

Query: 105 RETNRLYMANLQTIKQSHDMMTTTLDL 131
            +T R Y  N + +  S  M+ T   +
Sbjct: 234 IQTQRAYEINSKAVTTSDQMLQTLSQM 260



 Score = 39.9 bits (91), Expect = 0.11,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 22/41 (53%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  S +IA +G+  Q ++M +IS N+AN  T G       +
Sbjct: 1  MNRSLYIAATGMNAQQSQMDVISNNLANVSTNGFKGSRAVF 41


>gi|256750749|ref|ZP_05491634.1| protein of unknown function DUF1078 domain protein
           [Thermoanaerobacter ethanolicus CCSD1]
 gi|256750332|gb|EEU63351.1| protein of unknown function DUF1078 domain protein
           [Thermoanaerobacter ethanolicus CCSD1]
          Length = 417

 Score = 58.3 bits (139), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 14/85 (16%), Positives = 29/85 (34%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +   G              +         +   G ++  NV++  E  DM  T 
Sbjct: 333 FQNPMGLEKVGNTMFINTVNSGEPMIGAAGTNTRGSINPGTLEMSNVDLANEFTDMIVTQ 392

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R + AN + I  S +++   +++ R
Sbjct: 393 RGFQANARVITASDEILQDLVNMKR 417



 Score = 42.2 bits (97), Expect = 0.024,   Method: Composition-based stats.
 Identities = 15/42 (35%), Positives = 21/42 (50%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S + A SGL    ARM +I  NIAN  T G       ++
Sbjct: 1  MLRSMYSAVSGLKAHQARMDVIGNNIANVNTVGYKASRMTFK 42


>gi|167630298|ref|YP_001680797.1| flagellar hook protein [Heliobacterium modesticaldum Ice1]
 gi|167593038|gb|ABZ84786.1| flagellar hook protein [Heliobacterium modesticaldum Ice1]
          Length = 442

 Score = 58.3 bits (139), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 33/87 (37%)

Query: 47  KTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
            T S    +  +G     +          +   G   A   G ++  NV++  E  DM  
Sbjct: 356 TTFSNPAGLFKAGSNLYTRTNNSGEPKTGQPAVGGRGAITPGALEMSNVDLSQEFTDMIT 415

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
           T R + AN + I  S  M+   ++L R
Sbjct: 416 TQRGFQANSRIISVSDSMLEELVNLKR 442



 Score = 38.3 bits (87), Expect = 0.34,   Method: Composition-based stats.
 Identities = 17/97 (17%), Positives = 26/97 (26%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           ++ S     + L     RM  I  NIAN  T G       +               G R 
Sbjct: 1   MMRSLFSGVTALRNHQTRMDTIGNNIANVNTIGFKKSRVTFADALNQTIRGASSPQGGRG 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVE 100
               +     +           AS      N ++ +E
Sbjct: 61  GTNPMQVGLGMNIATMETVFTPASVQGTGKNSDLAIE 97


>gi|27380939|ref|NP_772468.1| flagellar basal body rod protein FlgG [Bradyrhizobium japonicum
           USDA 110]
 gi|27354105|dbj|BAC51093.1| flagellar basal-body rod protein [Bradyrhizobium japonicum USDA
           110]
          Length = 262

 Score = 58.3 bits (139), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 16/87 (18%), Positives = 30/87 (34%)

Query: 47  KTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
                +  +   G  +  +            +         G ++  NV+V+ E +D+  
Sbjct: 176 TRFINKAGLQPVGNNQFTETPSSGPPQDGTANTEGYGKITQGSLEQANVDVVSEMSDLIA 235

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
             R Y  N + I  +  MM +T  L R
Sbjct: 236 AQRAYEMNAKVISAADQMMQSTTALFR 262



 Score = 37.9 bits (86), Expect = 0.51,   Method: Composition-based stats.
 Identities = 16/41 (39%), Positives = 25/41 (60%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          + + H A +G+A Q   +Q+IS NIAN RTTG    +  ++
Sbjct: 1  MQALHTAATGMAAQELNVQVISNNIANLRTTGFKKQTAAFQ 41


>gi|238762358|ref|ZP_04623329.1| Lateral flagellar rod protein (FlgG-like) [Yersinia kristensenii
           ATCC 33638]
 gi|238699343|gb|EEP92089.1| Lateral flagellar rod protein (FlgG-like) [Yersinia kristensenii
           ATCC 33638]
          Length = 261

 Score = 58.3 bits (139), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 25/77 (32%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +   GG   K+     +                G ++  NV V+ E  DM    
Sbjct: 178 FVNPAGLEAVGGNMYKETVASGTAVEGVPGEEAFGQLEHGSLEGSNVQVVEEMVDMITVQ 237

Query: 109 RLYMANLQTIKQSHDMM 125
           R Y  N + +  + DM+
Sbjct: 238 RAYEMNAKMVSAADDML 254



 Score = 42.9 bits (99), Expect = 0.014,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 21/41 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  +  I+ +GLA Q A+M  IS N+AN  T G       +
Sbjct: 1  MNPALWISKTGLAAQDAKMNAISNNLANVNTDGFKRDRVVF 41


>gi|88704306|ref|ZP_01102020.1| Flagellar hook protein FlgE [Congregibacter litoralis KT71]
 gi|88701357|gb|EAQ98462.1| Flagellar hook protein FlgE [Congregibacter litoralis KT71]
          Length = 429

 Score = 58.3 bits (139), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 28/129 (21%), Positives = 48/129 (37%), Gaps = 2/129 (1%)

Query: 5   IASAHIANSGLAVQSAR-MQIISENIANAR-TTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            A + +   G A    R ++I    IA AR T G++         + + +  +   G   
Sbjct: 300 FAVSSVIQDGFAAGQLRGLEIDESGIAFARYTNGESRALGQIALASFNNQNGLQPVGDTN 359

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
             +     S  V E       A  S  ++  NV +  E  D+    R + AN Q I+   
Sbjct: 360 WVETFSSGSPNVGEPGTSGLGAVQSAALEDSNVEITQELVDLIVAQRNFQANAQVIQAED 419

Query: 123 DMMTTTLDL 131
            +  T ++L
Sbjct: 420 AITQTVINL 428



 Score = 35.2 bits (79), Expect = 3.0,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 20/39 (51%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          +   A SG+   +A + ++S NIANA TTG       + 
Sbjct: 2  AFSTAISGINAATADLGVVSNNIANASTTGFKASRAEFA 40


>gi|57167709|ref|ZP_00366849.1| flagellar basal-body rod protein (flgG) [Campylobacter coli RM2228]
 gi|305433215|ref|ZP_07402371.1| flagellar basal-body rod protein FlgG [Campylobacter coli JV20]
 gi|57020831|gb|EAL57495.1| flagellar basal-body rod protein (flgG) [Campylobacter coli RM2228]
 gi|304443916|gb|EFM36573.1| flagellar basal-body rod protein FlgG [Campylobacter coli JV20]
          Length = 263

 Score = 58.3 bits (139), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 17/86 (19%), Positives = 27/86 (31%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                  +H  G     + G   +                G ++  NV ++ E  D+   
Sbjct: 178 QFINPAGLHSMGDNLYLETGASGAPVAGIATQDGLGTIRHGFIELSNVQLVEEMTDLITG 237

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y A  + I  S DM+     L R
Sbjct: 238 QRAYEAGSKAITTSDDMLGIVNQLKR 263



 Score = 43.7 bits (101), Expect = 0.007,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 21/42 (50%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S H A +G+  Q  ++ + S NIAN  T G   G   + 
Sbjct: 1  MMRSLHTAATGMVAQQTQIDVTSNNIANVNTAGFKKGRAEFA 42


>gi|296157454|ref|ZP_06840289.1| flagellar basal-body rod protein FlgG [Burkholderia sp. Ch1-1]
 gi|295892226|gb|EFG72009.1| flagellar basal-body rod protein FlgG [Burkholderia sp. Ch1-1]
          Length = 262

 Score = 58.3 bits (139), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 30/84 (35%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
           T      +   G     +     +  V +           G V+  NVNV+ E  +M +T
Sbjct: 177 TFINPAGLDAKGENLFAETASSGAPNVAQPGLNGAGTLNQGYVEASNVNVVQELVNMIQT 236

Query: 108 NRLYMANLQTIKQSHDMMTTTLDL 131
            R Y  N + +  S  M+ T   +
Sbjct: 237 QRAYEINSKAVTTSDQMLQTLSQM 260



 Score = 40.2 bits (92), Expect = 0.097,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 22/41 (53%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  S +IA +G+  Q A+M +IS N+AN  T G       +
Sbjct: 1  MNRSLYIAATGMNAQQAQMDVISNNLANVSTNGFKGSRAVF 41


>gi|226939372|ref|YP_002794445.1| flgG [Laribacter hongkongensis HLHK9]
 gi|226714298|gb|ACO73436.1| flgG [Laribacter hongkongensis HLHK9]
          Length = 260

 Score = 58.3 bits (139), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 29/83 (34%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
               + +   GG    +     +  V         A     ++  NVNV  E  +M +  
Sbjct: 178 FINPQGLEPIGGNLYLETAASGAPTVANPTNDGTGAIQQTFLEASNVNVTEELVEMIQAQ 237

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y  N + IK S DM+     L
Sbjct: 238 RAYELNSRGIKTSDDMLARLSQL 260



 Score = 41.4 bits (95), Expect = 0.046,   Method: Composition-based stats.
 Identities = 17/92 (18%), Positives = 34/92 (36%), Gaps = 7/92 (7%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR-------RKTISFEEVMH 56
          ++ S +I+ +G+     R+ +I+ N+AN  TTG   G   +        R+  +      
Sbjct: 1  MLRSLYISKTGMDSSQFRLDVITNNLANVNTTGFKKGRAVFEDLMYQTIRQPGAQSSQNT 60

Query: 57 GSGGVRVKKIGVDQSTFVEEFDPGHPVANASG 88
                +   G        +F PG+     + 
Sbjct: 61 MLPTGLLVGTGAAPVAVDRQFSPGNLQQTNNA 92


>gi|78221652|ref|YP_383399.1| flagellar basal body rod protein FlgG [Geobacter metallireducens
           GS-15]
 gi|78192907|gb|ABB30674.1| Flagellar basal-body rod FlgG [Geobacter metallireducens GS-15]
          Length = 262

 Score = 58.3 bits (139), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 19/118 (16%), Positives = 36/118 (30%), Gaps = 7/118 (5%)

Query: 23  QIISENIAN-------ARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVE 75
              + NI N                    +    S    +   G    ++     +    
Sbjct: 145 NATAINIGNDGTVSVSQAGQKSPTNVGNIQLAMFSNPSGLLAIGKNLFQESDSSGNATTG 204

Query: 76  EFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
                     A G ++  NV+V+ E  +M    R Y  N + ++ + +M+ T   L R
Sbjct: 205 TPGQNGLGTTAQGFLEMSNVSVMEEMVNMITGQRAYEVNSKAVQTADEMLQTANSLKR 262



 Score = 41.4 bits (95), Expect = 0.039,   Method: Composition-based stats.
 Identities = 10/62 (16%), Positives = 22/62 (35%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I +   A SG+  Q   + +++ N+AN  T G       ++       +          
Sbjct: 1  MIRALWTAASGMQAQQTNIDVVANNLANVNTAGFKKSRADFQDLMYQNMKTTGSPSTNTT 60

Query: 64 KK 65
          + 
Sbjct: 61 QV 62


>gi|15596279|ref|NP_249773.1| flagellar basal body rod protein FlgG [Pseudomonas aeruginosa PAO1]
 gi|107100527|ref|ZP_01364445.1| hypothetical protein PaerPA_01001552 [Pseudomonas aeruginosa PACS2]
 gi|116049011|ref|YP_792187.1| flagellar basal body rod protein FlgG [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|152984786|ref|YP_001349648.1| flagellar basal body rod protein FlgG [Pseudomonas aeruginosa PA7]
 gi|218892954|ref|YP_002441823.1| flagellar basal body rod protein FlgG [Pseudomonas aeruginosa
           LESB58]
 gi|254234218|ref|ZP_04927541.1| flagellar basal-body rod protein FlgG [Pseudomonas aeruginosa
           C3719]
 gi|254239440|ref|ZP_04932762.1| flagellar basal-body rod protein FlgG [Pseudomonas aeruginosa 2192]
 gi|296390554|ref|ZP_06880029.1| flagellar basal body rod protein FlgG [Pseudomonas aeruginosa PAb1]
 gi|313106037|ref|ZP_07792296.1| flagellar basal-body rod protein FlgG [Pseudomonas aeruginosa
           39016]
 gi|9946998|gb|AAG04471.1|AE004539_13 flagellar basal-body rod protein FlgG [Pseudomonas aeruginosa PAO1]
 gi|115584232|gb|ABJ10247.1| flagellar basal-body rod protein FlgG [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|126166149|gb|EAZ51660.1| flagellar basal-body rod protein FlgG [Pseudomonas aeruginosa
           C3719]
 gi|126192818|gb|EAZ56881.1| flagellar basal-body rod protein FlgG [Pseudomonas aeruginosa 2192]
 gi|150959944|gb|ABR81969.1| flagellar basal-body rod protein FlgG [Pseudomonas aeruginosa PA7]
 gi|218773182|emb|CAW28994.1| flagellar basal-body rod protein FlgG [Pseudomonas aeruginosa
           LESB58]
 gi|310878798|gb|EFQ37392.1| flagellar basal-body rod protein FlgG [Pseudomonas aeruginosa
           39016]
          Length = 261

 Score = 58.3 bits (139), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 27/78 (34%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +   G     + G   +  V           A   ++  NVNV+ E  +M  T 
Sbjct: 178 FINPAGLQAIGNNLFLETGSSGAPQVGTPGLNGLGTVAQNTLENSNVNVVEELVNMITTQ 237

Query: 109 RLYMANLQTIKQSHDMMT 126
           R Y  N + I  +  M++
Sbjct: 238 RAYEMNSKVISTADQMLS 255



 Score = 41.8 bits (96), Expect = 0.035,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 23/42 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++++  ++ +GL+ Q   +  IS N+AN  TTG       ++
Sbjct: 1  MLSALWVSKTGLSAQDMNLTTISNNLANVSTTGFKRDRAEFQ 42


>gi|315636319|ref|ZP_07891569.1| flagellar basal-body rod protein FlgG [Arcobacter butzleri JV22]
 gi|315479408|gb|EFU70091.1| flagellar basal-body rod protein FlgG [Arcobacter butzleri JV22]
          Length = 262

 Score = 58.3 bits (139), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 27/64 (42%), Gaps = 2/64 (3%)

Query: 71  STFVEEFDPGHPV--ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
           S  V E DP      +    +++  NV ++ E  D+    R Y AN + I  + +M+   
Sbjct: 198 SGPVVEGDPTTEQFGSLKQSMLESSNVKLVNEMVDLITAQRAYEANSKAITTADNMLDIV 257

Query: 129 LDLL 132
             L 
Sbjct: 258 NRLK 261



 Score = 39.5 bits (90), Expect = 0.15,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 20/42 (47%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          +I   + A +G+     ++ + S NIAN  TTG       ++
Sbjct: 1  MIRGLYTAATGMNAMQHQIDVTSNNIANVNTTGFKKDRAEFQ 42


>gi|291276682|ref|YP_003516454.1| putative flagellar hook-associated protein [Helicobacter mustelae
           12198]
 gi|290963876|emb|CBG39712.1| putative flagellar hook-associated protein [Helicobacter mustelae
           12198]
          Length = 606

 Score = 58.3 bits (139), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 19/119 (15%), Positives = 37/119 (31%), Gaps = 4/119 (3%)

Query: 19  SARMQIISEN--IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEE 76
              M  ++ N  IAN          + Y  K    +  +         K+  D  +    
Sbjct: 488 RTWMAPVTGNFEIANMMQQMQYDDIEFYDNKFDIKKMKLSEFYEFIATKLATDTQSAQTT 547

Query: 77  FDPGHP--VANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            +       +     +    V+V  E  ++ +    Y AN + I     M+ T L + +
Sbjct: 548 MNTKKALLESAKKEHLSISQVSVDEEMVNLIKFQSGYSANAKVITAIDKMIDTLLSIKQ 606



 Score = 36.4 bits (82), Expect = 1.2,   Method: Composition-based stats.
 Identities = 14/78 (17%), Positives = 25/78 (32%), Gaps = 7/78 (8%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  +  S   + +GL      + +   NI+NA         + Y R+ +          G
Sbjct: 1  MGGIFTSLGTSYTGLQANQLMVDVTGNNISNASN-------EFYSRERVLSAPEKSLLIG 53

Query: 61 VRVKKIGVDQSTFVEEFD 78
            +   GVD        +
Sbjct: 54 GNLVGRGVDIQAVQRIHN 71


>gi|148266116|ref|YP_001232822.1| flagellar basal body rod protein FlgG [Geobacter uraniireducens
           Rf4]
 gi|146399616|gb|ABQ28249.1| flagellar basal-body rod protein FlgG [Geobacter uraniireducens
           Rf4]
          Length = 262

 Score = 58.3 bits (139), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 16/101 (15%), Positives = 33/101 (32%)

Query: 33  RTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKY 92
                       +  T S    +   G    +      +              + G ++ 
Sbjct: 162 SGQNTPTSVGTIQLATFSNPAGLSSLGHNLYQPTDSSGAATTGTSGQNGIGTLSQGFLEM 221

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            NV+V+ E  +M    R Y  N + ++ + +M+ T  +L R
Sbjct: 222 SNVSVMEEMVNMIVGQRAYEINSKAVQAADEMLQTANNLRR 262



 Score = 41.4 bits (95), Expect = 0.046,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 21/42 (50%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          +I +   A SG+  Q   + +++ N+AN  TTG       ++
Sbjct: 1  MIRALWTAASGMQAQQLNIDVVANNLANVNTTGFKKSRADFQ 42


>gi|332669198|ref|YP_004452206.1| flagellar hook-basal body protein [Cellulomonas fimi ATCC 484]
 gi|332338236|gb|AEE44819.1| flagellar hook-basal body protein [Cellulomonas fimi ATCC 484]
          Length = 392

 Score = 58.3 bits (139), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 37/105 (35%)

Query: 29  IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASG 88
           I  A + G           + +    +  +GG   +         V     G     A G
Sbjct: 288 ITGAFSNGLKQTIGRLAIGSFTNPSGLEKAGGSLFRTSVNSGDPQVGPAGTGGRGTLAGG 347

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NV++  E   +    R + AN + I  S +++   ++L R
Sbjct: 348 ALEMSNVDLSSEFTSLIIAQRGFQANSRVITTSDEVLQELVNLKR 392


>gi|332162899|ref|YP_004299476.1| Lateral flagellar rod protein [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|318604254|emb|CBY25752.1| flagellar basal-body rod protein FlgG [Yersinia enterocolitica
           subsp. palearctica Y11]
 gi|325667129|gb|ADZ43773.1| Lateral flagellar rod protein [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|330863349|emb|CBX73472.1| flagellar basal-body rod protein flgG [Yersinia enterocolitica
           W22703]
          Length = 261

 Score = 58.3 bits (139), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 25/77 (32%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +   GG   K+     +                G ++  NV V+ E  DM    
Sbjct: 178 FVNPAGLEAVGGNMYKETVASGAAVEGVAGEEAFGQLEHGSLEGSNVQVVEEMVDMITVQ 237

Query: 109 RLYMANLQTIKQSHDMM 125
           R Y  N + +  + DM+
Sbjct: 238 RAYEMNAKMVSAADDML 254



 Score = 42.2 bits (97), Expect = 0.027,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 21/41 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  +  ++ +GLA Q A+M  IS N+AN  T G       +
Sbjct: 1  MNPALWVSKTGLAAQDAKMNAISNNLANVNTDGFKRDRVVF 41


>gi|89068728|ref|ZP_01156114.1| flagellar hook protein FlgE, putative [Oceanicola granulosus
           HTCC2516]
 gi|89045691|gb|EAR51753.1| flagellar hook protein FlgE, putative [Oceanicola granulosus
           HTCC2516]
          Length = 432

 Score = 58.3 bits (139), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 22/117 (18%), Positives = 40/117 (34%), Gaps = 21/117 (17%)

Query: 19  SARMQIISENIANARTTGD--TPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEE 76
             RM + S  +AN            + Y+    S    +  +GG     I          
Sbjct: 335 GQRMSLFSLPVANVSNPEGLVAGNGNAYKLSRASGAMTLGIAGGGGTASIY--------- 385

Query: 77  FDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
                     +G ++  NV++  E  D+  T R Y  N + +  + +M+  T  + R
Sbjct: 386 ----------AGALEGSNVDIAEELTDLIATQRAYSTNAKVVTTADEMLDETTRIKR 432



 Score = 35.2 bits (79), Expect = 3.0,   Method: Composition-based stats.
 Identities = 20/102 (19%), Positives = 33/102 (32%), Gaps = 7/102 (6%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             ++ +     SGL   +A +  ISENIANA T G       +RR           +   
Sbjct: 1   MSILGAMKTGVSGLQANAASVANISENIANANTDG-------FRRSFSQMVTTTTTNPSS 53

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETAD 103
               I  D+             +     ++     V+ +  D
Sbjct: 54  MSGVIARDRIDMGTPGSMRPTDSATDLALEGGGFFVVSQRPD 95


>gi|110632656|ref|YP_672864.1| flagellar basal body rod protein FlgG [Mesorhizobium sp. BNC1]
 gi|110283640|gb|ABG61699.1| flagellar basal-body rod protein FlgG [Chelativorans sp. BNC1]
          Length = 262

 Score = 58.3 bits (139), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 18/131 (13%), Positives = 37/131 (28%), Gaps = 3/131 (2%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            +  +  I    + V   +   +    A      D            S E  +   G   
Sbjct: 135 PVTPAITIPADAVEVIVNKSGQV---FARIDGQADLQELGQLTLANFSNEAGLAPIGNNL 191

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
            ++        +             G ++  NV+ + E  ++    R Y  N + I  + 
Sbjct: 192 FRETPASGPATIGVPGDPGFATVEQGYLEASNVDPVKEITELISAQRAYEMNSKVITAAD 251

Query: 123 DMMTTTLDLLR 133
           +M  T    +R
Sbjct: 252 EMAATVTQAMR 262



 Score = 44.9 bits (104), Expect = 0.004,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 22/40 (55%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          + +  IA +G++ Q   +++I+ NIAN  TTG       +
Sbjct: 1  MKALSIAATGMSAQQTNLEVIANNIANINTTGFKRARAEF 40


>gi|144897832|emb|CAM74696.1| flagellar basal body distal rod protein; FlgG [Magnetospirillum
           gryphiswaldense MSR-1]
          Length = 261

 Score = 58.3 bits (139), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 15/46 (32%), Positives = 24/46 (52%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
            G ++  NVNV+ E  ++    R Y  N + I+ S +MM+T   L 
Sbjct: 216 QGFLETSNVNVVAEVTNLISAQRAYEMNSKVIQTSDEMMSTINQLK 261



 Score = 42.2 bits (97), Expect = 0.027,   Method: Composition-based stats.
 Identities = 14/40 (35%), Positives = 22/40 (55%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          + S +IA +G+  Q   +++IS NIAN  TT  T     +
Sbjct: 1  MRSLNIAATGMLAQQTNVEVISNNIANMNTTAYTKRRPEF 40


>gi|146341904|ref|YP_001206952.1| flagellar basal body rod protein FlgG [Bradyrhizobium sp. ORS278]
 gi|146194710|emb|CAL78735.1| Flagellar basal-body rod protein flgG (Distal rod protein)
           [Bradyrhizobium sp. ORS278]
          Length = 262

 Score = 58.3 bits (139), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 15/87 (17%), Positives = 31/87 (35%)

Query: 47  KTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
                +  +   G  +        +      +     +   G ++  NV+V+ E +++  
Sbjct: 176 TRFINKAGLQPVGNNQFTDTPSSGAPQDGIANQDGLGSITQGSLEQANVDVVSEMSELIA 235

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
             R Y  N + I  +  MM +T  L R
Sbjct: 236 AQRAYEMNAKVISAADQMMQSTTALFR 262



 Score = 37.2 bits (84), Expect = 0.70,   Method: Composition-based stats.
 Identities = 16/41 (39%), Positives = 25/41 (60%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          + + H A +G+A Q   +Q+IS NIAN RTTG    +  ++
Sbjct: 1  MQALHTAATGMAAQELNVQVISNNIANLRTTGFKKQTAAFQ 41


>gi|224825779|ref|ZP_03698883.1| flagellar basal-body rod protein FlgG [Lutiella nitroferrum 2002]
 gi|224602003|gb|EEG08182.1| flagellar basal-body rod protein FlgG [Lutiella nitroferrum 2002]
          Length = 262

 Score = 58.3 bits (139), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 20/131 (15%), Positives = 41/131 (31%), Gaps = 3/131 (2%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            ++ +  +  +  +V       +S  I  + +T  T                +   G   
Sbjct: 135 PIVPAITVPATATSVSIGETGTVS--ITQSGSTAQTEIGQ-LTLANFVNPTGLLALGDNL 191

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
            ++     +  V             G ++  NV V+ E  DM    R Y  N + +  + 
Sbjct: 192 FQETTASGTPTVGNPGSDALGKLKQGALEGSNVQVVEEMVDMIAAQRTYEMNTKVLSAAD 251

Query: 123 DMMTTTLDLLR 133
           +MM      +R
Sbjct: 252 NMMQYLAQSVR 262



 Score = 40.2 bits (92), Expect = 0.098,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 20/41 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  +  I+ +G+  Q AR+  I+ N+AN  T G       +
Sbjct: 1  MNPALWISKTGIQAQDARLGAIANNLANVNTVGFKRDRMVF 41


>gi|114765244|ref|ZP_01444376.1| Flagellar basal body rod protein [Pelagibaca bermudensis HTCC2601]
 gi|114542379|gb|EAU45407.1| Flagellar basal body rod protein [Roseovarius sp. HTCC2601]
          Length = 261

 Score = 58.3 bits (139), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 13/86 (15%), Positives = 29/86 (33%)

Query: 47  KTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
            T   +  M   G   ++                       G ++  NV+++ +  D+ +
Sbjct: 176 TTFVNDAGMRPLGNNLLEATVASGDAIPALPGDAGVGILRQGYLEASNVDIIRQITDLIQ 235

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLL 132
             R Y  N + I+ +  MM+    + 
Sbjct: 236 AQRAYEMNSKAIETADQMMSAANQIK 261



 Score = 43.7 bits (101), Expect = 0.010,   Method: Composition-based stats.
 Identities = 14/40 (35%), Positives = 21/40 (52%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          + +  IA +G+  Q   + +IS NIANA TTG       +
Sbjct: 1  MKALGIAATGMMAQQTNVDVISNNIANANTTGFKSARASF 40


>gi|309779447|ref|ZP_07674208.1| flagellar hook protein FlgE [Ralstonia sp. 5_7_47FAA]
 gi|308921688|gb|EFP67324.1| flagellar hook protein FlgE [Ralstonia sp. 5_7_47FAA]
          Length = 404

 Score = 58.3 bits (139), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 32/83 (38%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
               E +   GG +  +     +  +     G      S  V+  NV++  E  +M    
Sbjct: 321 FKAPEGLQNIGGNQWVETSNSGAPGLGTPGMGSFGLLQSSAVEQSNVDLSAELVNMIVAQ 380

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y AN QTIK    ++ T + L
Sbjct: 381 RSYQANAQTIKTEDTILQTLVSL 403



 Score = 36.8 bits (83), Expect = 0.99,   Method: Composition-based stats.
 Identities = 23/113 (20%), Positives = 34/113 (30%), Gaps = 14/113 (12%)

Query: 7   SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY---RRKTISFEEVMHGSGGVRV 63
                 SGL   S  + +I  N+ANA T G    +  +     +++          GV V
Sbjct: 2   GFQQGLSGLDAASKNLDVIGSNVANANTVGYKKSTAEFGDVYARSLVGASDNQIGQGVSV 61

Query: 64  KKIGV--DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
            K+     Q       +P     N SG  +           D       Y  N
Sbjct: 62  TKVSQAFTQGNVTITGNPLDIAINGSGFYR---------MVDQGSGQVSYTRN 105


>gi|322421662|ref|YP_004200885.1| flagellar basal-body rod protein FlgG [Geobacter sp. M18]
 gi|320128049|gb|ADW15609.1| flagellar basal-body rod protein FlgG [Geobacter sp. M18]
          Length = 262

 Score = 58.3 bits (139), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 29/85 (34%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +    ++  G           +            +   G ++  NV+V+ E   M  + 
Sbjct: 178 FTNPSGLNAIGKNLFLPTDSSGAATTGTAGQNGLGSLEQGYIEQSNVSVMEEMVSMIVSQ 237

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R Y  N + I+ S DM+     L R
Sbjct: 238 RAYEINSKAIQASDDMLQQAAALKR 262



 Score = 41.8 bits (96), Expect = 0.030,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 29/91 (31%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I +   A SG+  Q   + +++ N+AN+ TTG       ++      E+          
Sbjct: 1  MIRALWTAASGMQAQQLNIDVVANNLANSSTTGFKKSRADFQDLMYQTEKTTGAPATNAT 60

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIVKYPN 94
                Q            V     IV   N
Sbjct: 61 TVPTGIQVGLGVRPGAVAKVFTTGTIVHTGN 91


>gi|327480022|gb|AEA83332.1| flagellar basal body rod protein FlgG [Pseudomonas stutzeri DSM
           4166]
          Length = 261

 Score = 58.3 bits (139), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 25/78 (32%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +   G     +     +  V               ++  NV+V+ E  +M  T 
Sbjct: 178 FINPAGLQAMGSNLFLETAASGAPQVSTPGLNGLGTVLQNTLENSNVSVVEELVNMITTQ 237

Query: 109 RLYMANLQTIKQSHDMMT 126
           R Y  N + I  +  M++
Sbjct: 238 RAYEMNSKVISTADQMLS 255



 Score = 41.8 bits (96), Expect = 0.031,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 22/42 (52%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ +  ++ +GL+ Q   +  IS N+AN  TTG       ++
Sbjct: 1  MLPALWVSKTGLSAQDMNLTTISNNLANVSTTGFKRDRAEFQ 42


>gi|328543156|ref|YP_004303265.1| flagellar basal-body rod FlgG [polymorphum gilvum SL003B-26A1]
 gi|326412902|gb|ADZ69965.1| Flagellar basal-body rod FlgG [Polymorphum gilvum SL003B-26A1]
          Length = 259

 Score = 58.3 bits (139), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 19/112 (16%), Positives = 36/112 (32%), Gaps = 1/112 (0%)

Query: 21  RMQIISENIANARTTG-DTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDP 79
           R   IS N       G  T      +      +  +   G     +        V     
Sbjct: 147 RDLTISANGTVQAVVGVATQQFGQIQLARFVNKSGLEAIGDNLYLETEASGQPQVGIPGE 206

Query: 80  GHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
                     ++  NV+ + E +D+    R Y  N + I+ + +M +TT ++
Sbjct: 207 EGYGDLQQSYLEMSNVDAVSEISDLIAAQRAYEMNSRIIQAADEMYSTTTNI 258



 Score = 39.1 bits (89), Expect = 0.22,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 26/62 (41%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          + + HIA +G+  Q   +++IS N+AN RTTG       ++         M         
Sbjct: 1  MKALHIAATGMKAQELNVEVISNNVANMRTTGYKRQRADFQDLLYQNLRRMGTDSSNAGT 60

Query: 65 KI 66
           +
Sbjct: 61 IV 62


>gi|115523179|ref|YP_780090.1| flagellar basal body rod protein FlgG [Rhodopseudomonas palustris
           BisA53]
 gi|115517126|gb|ABJ05110.1| flagellar basal-body rod protein FlgG [Rhodopseudomonas palustris
           BisA53]
          Length = 262

 Score = 58.3 bits (139), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 13/79 (16%), Positives = 28/79 (35%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            + E  +   G    K+     +  V               ++  NV+ + E  ++    
Sbjct: 178 FANEAGLDPLGSNLYKETIASGTPVVGFPGDIGFGKIHQHYLESSNVDPVKEITELISAQ 237

Query: 109 RLYMANLQTIKQSHDMMTT 127
           R Y  N + I+ + +M +T
Sbjct: 238 RSYEMNSKVIQAADEMAST 256



 Score = 44.1 bits (102), Expect = 0.006,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 21/40 (52%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          + S  IA +G++ Q   +++I+ NIAN  TT        +
Sbjct: 1  MRSLAIAATGMSAQQLNVEVIANNIANINTTSYKRSRAEF 40


>gi|224373467|ref|YP_002607839.1| flagellar hook protein FlgE [Nautilia profundicola AmH]
 gi|223588607|gb|ACM92343.1| flagellar hook protein FlgE [Nautilia profundicola AmH]
          Length = 853

 Score = 58.3 bits (139), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 16/89 (17%), Positives = 28/89 (31%)

Query: 45  RRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
                   E +   GG             +     G   +     ++  NV++      +
Sbjct: 765 AIAKFVNNEGLMSEGGTLFSASPNSGEPIIGTAGTGGRGSIQPSSLEMSNVDLSRSLTQL 824

Query: 105 RETNRLYMANLQTIKQSHDMMTTTLDLLR 133
               R + AN +TI  S  M+ T L L +
Sbjct: 825 IVIQRGFQANSKTITTSDQMLNTLLQLKQ 853



 Score = 40.6 bits (93), Expect = 0.078,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 26/72 (36%), Gaps = 4/72 (5%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR----RKTISFEEVMHGSG 59
          ++ S     SGL      M + + NIAN  T G       ++    +   S        G
Sbjct: 1  MMRSLWSGVSGLNAHQIAMDVEANNIANVNTVGFKYSRTNFQNLLSQTVKSATAPQGDLG 60

Query: 60 GVRVKKIGVDQS 71
          G    +IG+  S
Sbjct: 61 GKNSLQIGLGTS 72


>gi|330502736|ref|YP_004379605.1| flagellar basal body rod protein FlgG [Pseudomonas mendocina NK-01]
 gi|328917022|gb|AEB57853.1| flagellar basal body rod protein FlgG [Pseudomonas mendocina NK-01]
          Length = 261

 Score = 58.3 bits (139), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 14/78 (17%), Positives = 26/78 (33%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +   G     + G   +  V               ++  NV+V+ E  +M  T 
Sbjct: 178 FVNPAGLEAIGNNLFLETGSSGAPQVGNPGLNGLGTTLQNTLENSNVSVVEELVNMITTQ 237

Query: 109 RLYMANLQTIKQSHDMMT 126
           R Y  N + I  +  M++
Sbjct: 238 RAYEMNSKVISTADQMLS 255



 Score = 41.8 bits (96), Expect = 0.031,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 21/41 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          ++ +  ++ +GL+ Q   +  IS N+AN  TTG       +
Sbjct: 1  MLPALWVSKTGLSAQDMNLTTISNNLANVATTGFKRDRAEF 41


>gi|254505064|ref|ZP_05117215.1| flagellar basal-body rod protein FlgG [Labrenzia alexandrii DFL-11]
 gi|222441135|gb|EEE47814.1| flagellar basal-body rod protein FlgG [Labrenzia alexandrii DFL-11]
          Length = 262

 Score = 58.3 bits (139), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 13/79 (16%), Positives = 28/79 (35%)

Query: 55  MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
           +   GG   ++     +                G ++  NV+ + E   +    R Y  N
Sbjct: 184 LEPVGGNLFRETPASGAPVAGVPGDPGFGVVRQGYLESSNVDPVKEITALISAQRGYEMN 243

Query: 115 LQTIKQSHDMMTTTLDLLR 133
            + +K + +M  T  + +R
Sbjct: 244 SKVMKAADEMANTVTNGIR 262



 Score = 43.7 bits (101), Expect = 0.009,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 21/40 (52%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          + +  IA +G++ Q   +++++ NIAN  TT        +
Sbjct: 1  MKALAIAATGMSAQQLNVEVVANNIANMNTTSFKRAQAEF 40


>gi|283852232|ref|ZP_06369505.1| protein of unknown function DUF1078 [Desulfovibrio sp. FW1012B]
 gi|283572458|gb|EFC20445.1| protein of unknown function DUF1078 [Desulfovibrio sp. FW1012B]
          Length = 518

 Score = 58.0 bits (138), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 12/100 (12%), Positives = 32/100 (32%)

Query: 34  TTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
           + G T                +   G   +       +      + G     +   ++  
Sbjct: 419 SNGQTKDLYVLALADFRNPTDLRREGNNLLSATTESGAATTGRANSGIYDGISGYSLESS 478

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           NV++  E  ++    R + +N + +  +  MM   L++ +
Sbjct: 479 NVDMATEMVNLITLQRAFQSNSKVVTTADTMMEKALEIKK 518


>gi|254973919|ref|ZP_05270391.1| flagellar hook protein [Clostridium difficile QCD-66c26]
 gi|255091306|ref|ZP_05320784.1| flagellar hook protein [Clostridium difficile CIP 107932]
 gi|255312963|ref|ZP_05354546.1| flagellar hook protein [Clostridium difficile QCD-76w55]
 gi|255515722|ref|ZP_05383398.1| flagellar hook protein [Clostridium difficile QCD-97b34]
 gi|255648816|ref|ZP_05395718.1| flagellar hook protein [Clostridium difficile QCD-37x79]
 gi|260682035|ref|YP_003213320.1| flagellar hook protein [Clostridium difficile CD196]
 gi|260685633|ref|YP_003216766.1| flagellar hook protein [Clostridium difficile R20291]
 gi|306518931|ref|ZP_07405278.1| flagellar hook protein [Clostridium difficile QCD-32g58]
 gi|260208198|emb|CBA60542.1| flagellar hook protein [Clostridium difficile CD196]
 gi|260211649|emb|CBE01907.1| flagellar hook protein [Clostridium difficile R20291]
          Length = 327

 Score = 58.0 bits (138), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 25/47 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NV++  E  +M   +R + AN + I  S +++   ++L R
Sbjct: 281 QGAIEASNVDIAEEFTEMIIASRSFQANSKIISTSDEILQEIINLKR 327



 Score = 37.9 bits (86), Expect = 0.41,   Method: Composition-based stats.
 Identities = 14/69 (20%), Positives = 29/69 (42%), Gaps = 4/69 (5%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANART----TGDTPGSDPYRRKTISFEEVMHGSG 59
          +I + +   SG+     ++ +I  N+ANA T          +D + +  +         G
Sbjct: 1  MIKAMYSGVSGMKANQTKLDVIGNNVANAGTTSFKKSSARITDSFYQTVLYASAPTAALG 60

Query: 60 GVRVKKIGV 68
          G  + ++GV
Sbjct: 61 GTNLGQVGV 69


>gi|157738176|ref|YP_001490860.1| flagellar distal rod protein FlgG [Arcobacter butzleri RM4018]
 gi|157700030|gb|ABV68190.1| flagellar distal rod protein FlgG [Arcobacter butzleri RM4018]
          Length = 262

 Score = 58.0 bits (138), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 11/60 (18%), Positives = 23/60 (38%)

Query: 73  FVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
              +       +    +++  NV ++ E  D+    R Y AN + I  + +M+     L 
Sbjct: 202 IEGDPTTEQFGSLKQSMLESSNVKLVNEMVDLITAQRAYEANSKAITTADNMLDIVNRLK 261



 Score = 39.5 bits (90), Expect = 0.17,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 20/42 (47%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          +I   + A +G+     ++ + S NIAN  TTG       ++
Sbjct: 1  MIRGLYTAATGMNAMQHQIDVTSNNIANVNTTGFKKDRAEFQ 42


>gi|167905092|ref|ZP_02492297.1| flagellar basal body rod protein FlgG [Burkholderia pseudomallei
           NCTC 13177]
          Length = 258

 Score = 58.0 bits (138), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 19/113 (16%), Positives = 30/113 (26%), Gaps = 3/113 (2%)

Query: 24  IISENIANARTTGDTPGSDPYRRKT---ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPG 80
            I EN   A T           +           +   G     +          E    
Sbjct: 146 AIGENGIVAATMPGASSPSEVGQIQLANFVNPAGLLALGDNLYMETVASGPPNEGEPGTD 205

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
                  G ++  NV V+ E  DM    R Y  N + +  + +M+       R
Sbjct: 206 VFGKIKQGALEGSNVQVVEEMVDMIAAQRTYEMNTKVLSAADNMLQQLSQAAR 258



 Score = 37.2 bits (84), Expect = 0.73,   Method: Composition-based stats.
 Identities = 11/37 (29%), Positives = 19/37 (51%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
            I+ +GL  Q A++Q ++ N+AN  T G       +
Sbjct: 1  MWISKTGLQAQDAKLQAVANNLANVNTVGFKRDRVVF 37


>gi|256833233|ref|YP_003161960.1| hypothetical protein Jden_2019 [Jonesia denitrificans DSM 20603]
 gi|256686764|gb|ACV09657.1| protein of unknown function DUF1078 domain protein [Jonesia
           denitrificans DSM 20603]
          Length = 397

 Score = 58.0 bits (138), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 17/86 (19%), Positives = 32/86 (37%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
           T +    +   GG             V E   G       G ++  NV++  E  ++   
Sbjct: 312 TFANPAGLEKQGGNLYGTSVNSGDAQVGEPGMGGRGGLVGGALEMSNVDLSQEFTNLIIA 371

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R + AN + I  S +++   ++L R
Sbjct: 372 QRGFQANSRVITTSDEVLQELVNLKR 397


>gi|120613061|ref|YP_972739.1| flagellar basal-body rod protein FlgG [Acidovorax citrulli AAC00-1]
 gi|326319099|ref|YP_004236771.1| flagellar basal-body rod protein FlgG [Acidovorax avenae subsp.
           avenae ATCC 19860]
 gi|120591525|gb|ABM34965.1| flagellar basal-body rod protein FlgG [Acidovorax citrulli AAC00-1]
 gi|323375935|gb|ADX48204.1| flagellar basal-body rod protein FlgG [Acidovorax avenae subsp.
           avenae ATCC 19860]
          Length = 260

 Score = 58.0 bits (138), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 22/117 (18%), Positives = 37/117 (31%), Gaps = 2/117 (1%)

Query: 17  VQSARMQIISENIANARTTGDTP--GSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFV 74
             +  + I ++ I +A   G T           +      +   G    K+         
Sbjct: 144 ANATGISISTDGIVSATVPGTTAPQQIGTLGMASFINSAGLEPIGQNLFKESAASGQPQQ 203

Query: 75  EEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
                        G ++  NVNV+ E   M +T R Y  N + I+ S  M+     L
Sbjct: 204 GTPGTNGLGIIRQGFLETSNVNVVEELVSMIQTQRAYEMNSKAIQTSDQMLAKLAQL 260



 Score = 44.1 bits (102), Expect = 0.007,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 24/41 (58%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I S  IA +G++ Q  ++ +IS N+AN  TTG    +  +
Sbjct: 1  MINSLWIAKTGMSAQQTQLDVISHNLANVSTTGYKRNNAVF 41


>gi|39936961|ref|NP_949237.1| flagellar basal body rod protein FlgG [Rhodopseudomonas palustris
           CGA009]
 gi|192292789|ref|YP_001993394.1| flagellar basal body rod protein FlgG [Rhodopseudomonas palustris
           TIE-1]
 gi|39650818|emb|CAE29341.1| putative flagellar basal-body rod protein flgg (distal rod protein)
           [Rhodopseudomonas palustris CGA009]
 gi|192286538|gb|ACF02919.1| flagellar basal-body rod protein FlgG [Rhodopseudomonas palustris
           TIE-1]
          Length = 262

 Score = 58.0 bits (138), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 14/113 (12%), Positives = 35/113 (30%), Gaps = 3/113 (2%)

Query: 24  IISENIANARTTGDTPGSDPYRR---KTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPG 80
            ++ N   + T   +       +        +  +   G     +     +         
Sbjct: 150 TVAANGQVSVTISGSTTPTVIGQIGLTRFINKAGLQPQGDNLFIETPASGTPQDGIASAD 209

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
                    ++  NV V+ E +D+    R Y  N + +  +  M+ +T ++ R
Sbjct: 210 GLGDIMQKTLEMANVEVVTEISDLISAQRAYEMNAKVVSSADQMLQSTSNMFR 262



 Score = 36.4 bits (82), Expect = 1.5,   Method: Composition-based stats.
 Identities = 15/41 (36%), Positives = 25/41 (60%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          + + + A +G+A Q   +Q+IS NIAN RTTG    +  ++
Sbjct: 1  MRALYTAATGMAAQELNVQVISNNIANMRTTGFKKQTAQFQ 41


>gi|15887898|ref|NP_353579.1| flagellar basal body rod protein FlgG [Agrobacterium tumefaciens
           str. C58]
 gi|20141428|sp|Q44338|FLGG_AGRT5 RecName: Full=Flagellar basal-body rod protein flgG; AltName:
           Full=Distal rod protein
 gi|15155490|gb|AAK86364.1| flagellar basal-body rod protein [Agrobacterium tumefaciens str.
           C58]
          Length = 262

 Score = 58.0 bits (138), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 19/122 (15%), Positives = 37/122 (30%), Gaps = 3/122 (2%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           I + +I      +   R   ++  I NA                 + E  +   G     
Sbjct: 137 IPNINIPTDAQDITITRTGQVTARIGNAADFTQLGQLT---IANFANEAGLKPLGDNLFS 193

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           +     +  V   D           ++  NV+ + E  D+    R Y  N + I  + +M
Sbjct: 194 QTPASGAPVVGVPDDPSYGYVKQSYLEGSNVDAVKEITDLITAQRAYEMNSKVITTADEM 253

Query: 125 MT 126
            +
Sbjct: 254 AS 255



 Score = 42.9 bits (99), Expect = 0.013,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 21/40 (52%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          + +  IA +G+  Q   +++I+ NIAN  TTG       +
Sbjct: 1  MRALAIAATGMDAQQTNLEVIANNIANINTTGYKRARAEF 40


>gi|86750896|ref|YP_487392.1| flagellar basal body rod protein FlgG [Rhodopseudomonas palustris
           HaA2]
 gi|86573924|gb|ABD08481.1| Flagellar basal-body rod FlgG [Rhodopseudomonas palustris HaA2]
          Length = 262

 Score = 58.0 bits (138), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 17/135 (12%), Positives = 40/135 (29%), Gaps = 9/135 (6%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR---KTISFEEVMHGS 58
           + L  +  I N   ++       ++ N   + T           +        +  +   
Sbjct: 134 NPLQPTITIPNGATSI------TVATNGQVSVTVSGATAPTVLGQIGLTRFINKTGLQPQ 187

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
           G     +                        ++  NV V+ E +D+    R Y  N + +
Sbjct: 188 GDNLFIETQASGPPQDGIATADGLGDMMQKTLEQANVEVVTEISDLISAQRAYEMNAKVV 247

Query: 119 KQSHDMMTTTLDLLR 133
             +  M+ +T ++ R
Sbjct: 248 SAADQMLQSTSNMYR 262



 Score = 36.4 bits (82), Expect = 1.4,   Method: Composition-based stats.
 Identities = 15/41 (36%), Positives = 25/41 (60%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          + + + A +G+A Q   +Q+IS NIAN RTTG    +  ++
Sbjct: 1  MRALYTAATGMAAQELNVQVISNNIANMRTTGFKKQTAQFQ 41


>gi|332703535|ref|ZP_08423623.1| flagellar hook-basal body protein [Desulfovibrio africanus str.
           Walvis Bay]
 gi|332553684|gb|EGJ50728.1| flagellar hook-basal body protein [Desulfovibrio africanus str.
           Walvis Bay]
          Length = 556

 Score = 58.0 bits (138), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 31/85 (36%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +    +   GG               + + G   + AS  ++  NV++  E   M  T 
Sbjct: 472 FNNPWGLRREGGNLFMDTRDSGGAITNQANRGGKGSIASNSIEQSNVDMADEFVQMITTQ 531

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R + AN + I     ++   ++L R
Sbjct: 532 RGFQANGKVITTVDTLLGEVINLKR 556



 Score = 36.8 bits (83), Expect = 1.1,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 18/44 (40%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
            L AS     +GL     +M +I  NIAN  T G       ++
Sbjct: 1  MGLSASMFSGVTGLKAHGDKMGVIGNNIANVSTIGFKGARMFFQ 44


>gi|299068732|emb|CBJ39971.1| flagellar hook protein FlgE [Ralstonia solanacearum CMR15]
          Length = 401

 Score = 58.0 bits (138), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 19/87 (21%), Positives = 32/87 (36%)

Query: 45  RRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
                   + +   GG +  +     S  +     G      S  V+  NV++  E  +M
Sbjct: 314 AMTNFKAPDGLQNIGGNQWVETAESGSPQMGTPGMGSFGLLQSSAVEQSNVDLSAELVNM 373

Query: 105 RETNRLYMANLQTIKQSHDMMTTTLDL 131
               R Y AN QTIK    ++ T + +
Sbjct: 374 IVAQRSYQANAQTIKTEDTILQTLVSM 400



 Score = 36.4 bits (82), Expect = 1.5,   Method: Composition-based stats.
 Identities = 22/113 (19%), Positives = 34/113 (30%), Gaps = 14/113 (12%)

Query: 7   SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY---RRKTISFEEVMHGSGGVRV 63
                 SGL   S  + +I  N+ANA T G    +  +     +++          GV V
Sbjct: 2   GFQQGLSGLDAASKNLDVIGSNVANANTVGYKKSTAEFGDVYARSLVGASDNQIGQGVDV 61

Query: 64  KKIGVD--QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
            K+     Q       +P     N +G  +           D       Y  N
Sbjct: 62  TKVSQSFTQGNVTVTGNPLDIAINGTGFYR---------MVDASSGQVSYTRN 105


>gi|299131785|ref|ZP_07024980.1| flagellar basal-body rod protein FlgG [Afipia sp. 1NLS2]
 gi|298591922|gb|EFI52122.1| flagellar basal-body rod protein FlgG [Afipia sp. 1NLS2]
          Length = 262

 Score = 58.0 bits (138), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 15/87 (17%), Positives = 28/87 (32%)

Query: 47  KTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
                +  +   G                  +         G ++  NV V+ E +D+  
Sbjct: 176 TRFINKAGLQSIGDNLFTDTPASGPPQDGLANADGFGDIQQGNLEQANVEVVSEISDLIA 235

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
             R Y  N + +  +  MM +T  +LR
Sbjct: 236 AQRAYEMNAKVVSAADQMMQSTTGMLR 262



 Score = 36.0 bits (81), Expect = 1.9,   Method: Composition-based stats.
 Identities = 15/41 (36%), Positives = 24/41 (58%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          + + + A +G+A Q   +Q+IS NIAN RTTG       ++
Sbjct: 1  MRALYTAATGMAAQELSVQVISNNIANLRTTGYKKQMASFQ 41


>gi|313894975|ref|ZP_07828534.1| flagellar basal-body rod protein FlgG [Selenomonas sp. oral taxon
           137 str. F0430]
 gi|320530443|ref|ZP_08031501.1| flagellar basal-body rod protein FlgG [Selenomonas artemidis F0399]
 gi|312976428|gb|EFR41884.1| flagellar basal-body rod protein FlgG [Selenomonas sp. oral taxon
           137 str. F0430]
 gi|320137276|gb|EFW29200.1| flagellar basal-body rod protein FlgG [Selenomonas artemidis F0399]
          Length = 264

 Score = 58.0 bits (138), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 20/102 (19%), Positives = 34/102 (33%), Gaps = 2/102 (1%)

Query: 34  TTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDP--GHPVANASGIVK 91
             G T   +  +     F      +   +   +  D S    E  P          G ++
Sbjct: 163 EAGQTQQQEAGQITLARFVNPAGLTSIGKNLFVVSDASGEAIESTPGLDGTGTLTQGTLE 222

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             NV ++ E  +M  + R Y +N + I  S  M+     L R
Sbjct: 223 MSNVQIVEEMVEMIISQRAYESNSKAITTSDSMLEIANTLKR 264



 Score = 43.7 bits (101), Expect = 0.009,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 22/57 (38%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          ++ +   A SG+  Q A M I++ NIAN  T G       ++              G
Sbjct: 1  MMRALWSAASGMKAQQAHMDIVAHNIANVNTHGGKKVRAEFQDLVYQTLREAGARNG 57


>gi|225686012|ref|YP_002733984.1| flagellar basal body rod protein FlgG [Brucella melitensis ATCC
           23457]
 gi|256262865|ref|ZP_05465397.1| flagellar basal body rod protein [Brucella melitensis bv. 2 str.
           63/9]
 gi|225642117|gb|ACO02030.1| flagellar basal-body rod protein FlgG [Brucella melitensis ATCC
           23457]
 gi|263092700|gb|EEZ16909.1| flagellar basal body rod protein [Brucella melitensis bv. 2 str.
           63/9]
 gi|326410335|gb|ADZ67399.1| flagellar basal body rod protein FlgG [Brucella melitensis M28]
 gi|326553627|gb|ADZ88266.1| flagellar basal body rod protein FlgG [Brucella melitensis M5-90]
          Length = 262

 Score = 58.0 bits (138), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 15/79 (18%), Positives = 29/79 (36%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            + E  +   GG   ++        V         +   G ++  NV+ + E  D+    
Sbjct: 178 FTNEAGLEPLGGNLYRETEASGGALVGVPGDPGYGSIKQGYLEASNVDPVKEITDLITAQ 237

Query: 109 RLYMANLQTIKQSHDMMTT 127
           R Y  N + I+ + +M  T
Sbjct: 238 RAYEMNSKVIQAADEMAAT 256



 Score = 44.9 bits (104), Expect = 0.004,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 21/40 (52%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          + +  IA +G+  Q   +++I+ NIAN  TTG       +
Sbjct: 1  MKALTIAATGMNAQQLNLEVIANNIANINTTGFKRARAEF 40


>gi|87306342|ref|ZP_01088489.1| FlgF [Blastopirellula marina DSM 3645]
 gi|87290521|gb|EAQ82408.1| FlgF [Blastopirellula marina DSM 3645]
          Length = 255

 Score = 58.0 bits (138), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 22/57 (38%)

Query: 74  VEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             E          +G ++   VN + E   M E  R Y AN+  IK   +M+   + 
Sbjct: 193 PVEPLALEERQTRAGYLEGSGVNSITEMMTMIEAQRAYEANVNLIKNHDEMLGNLIS 249


>gi|257457573|ref|ZP_05622740.1| flagellar basal-body rod protein FlgG [Treponema vincentii ATCC
           35580]
 gi|257444959|gb|EEV20035.1| flagellar basal-body rod protein FlgG [Treponema vincentii ATCC
           35580]
          Length = 271

 Score = 58.0 bits (138), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 28/114 (24%), Positives = 43/114 (37%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFV 74
           L  Q  ++    E  A   T  D+  +   R K ++FE   +         +    S   
Sbjct: 150 LQDQEYKVNQNGEVYARPMTEPDSDSTLADRLKIVTFENDRYLKKHGSSFYLDTPVSGPA 209

Query: 75  EEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
              + G       G V+  N+ V+ E   M E NR Y AN +TI+    MM+  
Sbjct: 210 IAAEGGDRPVVVQGFVEASNIKVVNEMVRMIEVNRAYEANQKTIQSEDTMMSKL 263



 Score = 46.4 bits (108), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 31/71 (43%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I   + A SG+  Q  ++ +I++N+ANA TT        ++         ++  G V+ 
Sbjct: 1  MIRGWYTAASGMNAQQKQLDVIAQNLANADTTSYKRDVATHKNFPELLIRRLNDDGVVKN 60

Query: 64 KKIGVDQSTFV 74
               D +  +
Sbjct: 61 PFGSSDVAPII 71


>gi|83944162|ref|ZP_00956618.1| flagellar basal-body rod protein FlgG [Sulfitobacter sp. EE-36]
 gi|83845029|gb|EAP82910.1| flagellar basal-body rod protein FlgG [Sulfitobacter sp. EE-36]
          Length = 261

 Score = 58.0 bits (138), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 31/85 (36%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
           T   E  +   G   +++                      G ++  NVN++ +  D+   
Sbjct: 177 TFLNEAGLKPVGDNLMEQTAASGEPVQNVPGTPGVGITRQGYLEQSNVNIIQQITDLISA 236

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLL 132
            R Y  N + I+ +  +MTTT  + 
Sbjct: 237 QRAYEMNSKAIETADQIMTTTNQIK 261



 Score = 45.6 bits (106), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 23/41 (56%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          + +  IA +G+  Q   + +I+ NIANA TTG   G   ++
Sbjct: 1  MKALGIAATGMLAQQTNVDVIANNIANANTTGFKSGRAAFQ 41


>gi|255099422|ref|ZP_05328399.1| flagellar hook protein [Clostridium difficile QCD-63q42]
          Length = 327

 Score = 58.0 bits (138), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 25/47 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NV++  E  +M   +R + AN + I  S +++   ++L R
Sbjct: 281 QGAIEASNVDIAEEFTEMIIASRSFQANSKIISTSDEILQEIINLKR 327



 Score = 37.9 bits (86), Expect = 0.43,   Method: Composition-based stats.
 Identities = 14/69 (20%), Positives = 29/69 (42%), Gaps = 4/69 (5%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANART----TGDTPGSDPYRRKTISFEEVMHGSG 59
          +I + +   SG+     ++ +I  N+ANA T          +D + +  +         G
Sbjct: 1  MIKAMYSGVSGMKANQTKLDVIGNNVANAGTTSFKKSSARITDSFYQTVLYASAPTAALG 60

Query: 60 GVRVKKIGV 68
          G  + ++GV
Sbjct: 61 GTNLGQVGV 69


>gi|146307867|ref|YP_001188332.1| flagellar basal body rod protein FlgG [Pseudomonas mendocina ymp]
 gi|145576068|gb|ABP85600.1| flagellar basal-body rod protein FlgG [Pseudomonas mendocina ymp]
          Length = 261

 Score = 58.0 bits (138), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 14/78 (17%), Positives = 26/78 (33%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +   G     + G   +  V               ++  NV+V+ E  +M  T 
Sbjct: 178 FVNPAGLEAIGNNLFLETGSSGAPQVGNPGLNGLGTTLQNTLENSNVSVVEELVNMITTQ 237

Query: 109 RLYMANLQTIKQSHDMMT 126
           R Y  N + I  +  M++
Sbjct: 238 RAYEMNSKVISTADQMLS 255



 Score = 41.8 bits (96), Expect = 0.034,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 21/41 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          ++ +  ++ +GL+ Q   +  IS N+AN  TTG       +
Sbjct: 1  MLPALWVSKTGLSAQDMNLTTISNNLANVATTGFKRDRAEF 41


>gi|330943210|gb|EGH45617.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv.
           pisi str. 1704B]
          Length = 133

 Score = 58.0 bits (138), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 19/128 (14%), Positives = 39/128 (30%), Gaps = 2/128 (1%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            L  +  +  +       +   +S  +A A  T    G+   +         +   GG  
Sbjct: 6   ALEPAIVVPQNAQTFTVGQDGTVSVTLAGATATPQIIGN--IQTADFINPAGLQAMGGNL 63

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
             + G   +  +               ++  NV+ + E  +M  T R Y  N + I  + 
Sbjct: 64  YLETGSSGAPQIGTPGLNGLGPTLQNTLENSNVSTVEELVNMITTQRAYEMNSKVISTAD 123

Query: 123 DMMTTTLD 130
            M+     
Sbjct: 124 QMLQNLTQ 131


>gi|149203100|ref|ZP_01880071.1| flagellar hook protein FlgE, putative [Roseovarius sp. TM1035]
 gi|149143646|gb|EDM31682.1| flagellar hook protein FlgE, putative [Roseovarius sp. TM1035]
          Length = 433

 Score = 58.0 bits (138), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 30/142 (21%), Positives = 52/142 (36%), Gaps = 13/142 (9%)

Query: 1   MDYLIASA---HIANSGLAVQSARMQIISENI-ANARTTGDTPGSDPYRRKTISFEEVMH 56
           M  L  S     IA  G    S    + S N+ AN                 +   ++ +
Sbjct: 296 MSQLSDSFAPHSIAKDG----SPVGNMTSANVDANGFVRATFDTGVSRIVYQVPLVDLPN 351

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV-----KYPNVNVLVETADMRETNRLY 111
            +G V + +     ST    F      A  +G +     +    +V  E  DM +T R Y
Sbjct: 352 PNGMVSMDQQTYLPSTDSGSFFLWDAGAGPTGDIVAFARQESATDVAGELTDMIQTQRAY 411

Query: 112 MANLQTIKQSHDMMTTTLDLLR 133
            +N + I+   +M+  T +++R
Sbjct: 412 SSNAKVIQTVDEMLQETTNIIR 433



 Score = 41.4 bits (95), Expect = 0.042,   Method: Composition-based stats.
 Identities = 21/97 (21%), Positives = 39/97 (40%), Gaps = 2/97 (2%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            + +S + + +GL   + R+  IS+NIAN+ T G       +    I+     + +GGV
Sbjct: 1  MTISSSLNASVAGLNANATRLATISDNIANSSTFGYRRVEADFESVVIAGRGGSYAAGGV 60

Query: 62 R--VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVN 96
          R   +++       V   +P        G +    V 
Sbjct: 61 RAGTQRLIDQGGAIVSSSNPTDLAVRDRGFLPVARVT 97


>gi|126697826|ref|YP_001086723.1| flagellar hook protein [Clostridium difficile 630]
 gi|115249263|emb|CAJ67076.1| Flagellar hook protein FlgE (Distal rod protein) [Clostridium
           difficile]
          Length = 327

 Score = 58.0 bits (138), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 25/47 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NV++  E  +M   +R + AN + I  S +++   ++L R
Sbjct: 281 QGAIEASNVDIAEEFTEMIIASRSFQANSKIISTSDEILQEIINLKR 327



 Score = 37.9 bits (86), Expect = 0.46,   Method: Composition-based stats.
 Identities = 14/69 (20%), Positives = 29/69 (42%), Gaps = 4/69 (5%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANART----TGDTPGSDPYRRKTISFEEVMHGSG 59
          +I + +   SG+     ++ +I  N+ANA T          +D + +  +         G
Sbjct: 1  MIKAMYSGVSGMKANQTKLDVIGNNVANAGTTSFKKSSARITDSFYQTVLYASAPTAALG 60

Query: 60 GVRVKKIGV 68
          G  + ++GV
Sbjct: 61 GTNLGQVGV 69


>gi|219670134|ref|YP_002460569.1| hypothetical protein Dhaf_4124 [Desulfitobacterium hafniense DCB-2]
 gi|219540394|gb|ACL22133.1| protein of unknown function DUF1078 domain protein
           [Desulfitobacterium hafniense DCB-2]
          Length = 426

 Score = 58.0 bits (138), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 15/47 (31%), Positives = 23/47 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
              V+  NV++  E  DM  T R + AN + I  S  ++   +DL R
Sbjct: 379 PNSVEMSNVDLSQEFTDMIVTQRGFQANSRVITVSDSLLQELIDLKR 425



 Score = 36.8 bits (83), Expect = 1.0,   Method: Composition-based stats.
 Identities = 17/108 (15%), Positives = 33/108 (30%), Gaps = 7/108 (6%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           ++ S + A SGL     +M ++  NIAN  TTG        R +      +     G   
Sbjct: 1   MLRSLYSAISGLKNHQIKMDVVGNNIANVNTTG------FKRSRVTFSTMLSQTMKGAGS 54

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
                  +   +        +    +    +     ++ D     R +
Sbjct: 55  PSANQGGTNPAQVGLGSMVSSIDQIMTTGSS-QNTGKSTDAMINGRGF 101


>gi|57504594|ref|ZP_00370706.1| flagellar hook protein FlgE [Campylobacter coli RM2228]
 gi|57019489|gb|EAL56183.1| flagellar hook protein FlgE [Campylobacter coli RM2228]
          Length = 845

 Score = 58.0 bits (138), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 23/106 (21%), Positives = 39/106 (36%)

Query: 28  NIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANAS 87
           NI    T G T         +++    +   GG   K      +  V E   G      +
Sbjct: 740 NILGEFTNGKTFAVAKIAMASVANNSGLEEIGGNLFKVTANSGAIVVGEAGTGGRGEMKT 799

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             ++  NV++     ++    R Y AN +TI  S  M+ T + L +
Sbjct: 800 SALEMSNVDLSRSLTELIIIQRGYQANSKTISTSDQMLQTLIQLKQ 845



 Score = 34.8 bits (78), Expect = 4.1,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 24/72 (33%), Gaps = 4/72 (5%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR----RKTISFEEVMHGSG 59
          ++ S     SGL      M +   NI+N  T G       +     +          G G
Sbjct: 1  MMRSLWSGVSGLQAHQVAMDVEGNNISNVNTKGFKYSRADFGTMFSQTVKIATAPTDGRG 60

Query: 60 GVRVKKIGVDQS 71
          G    +IG+  S
Sbjct: 61 GSNPLQIGLGVS 72


>gi|261856358|ref|YP_003263641.1| flagellar basal-body rod protein FlgG [Halothiobacillus
           neapolitanus c2]
 gi|261836827|gb|ACX96594.1| flagellar basal-body rod protein FlgG [Halothiobacillus
           neapolitanus c2]
          Length = 262

 Score = 58.0 bits (138), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 20/128 (15%), Positives = 37/128 (28%), Gaps = 3/128 (2%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            L  +  +     ++   +   +S  +A                        +   G   
Sbjct: 136 PLQPAITVPQGAQSITVGKDGTVSVQLA---GQAQPSQVGTIDLADFVNPAGLQPIGDNL 192

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
             + G   +                G+++  NVNV+ E   M ET R Y  N + I  + 
Sbjct: 193 FLESGSSGAPQTSTPGLNGVGNMQQGMLESSNVNVVEELVSMIETQRAYEMNSKAISATS 252

Query: 123 DMMTTTLD 130
            M+ T   
Sbjct: 253 SMLQTLNQ 260



 Score = 44.1 bits (102), Expect = 0.007,   Method: Composition-based stats.
 Identities = 15/40 (37%), Positives = 20/40 (50%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
            +  IA +GL  Q  RM +IS N+AN  TTG       +
Sbjct: 3  TPALWIAKTGLDAQQTRMSVISNNLANVNTTGFKQDRAVF 42


>gi|85706142|ref|ZP_01037237.1| flagellar hook protein FlgE, putative [Roseovarius sp. 217]
 gi|85669306|gb|EAQ24172.1| flagellar hook protein FlgE, putative [Roseovarius sp. 217]
          Length = 448

 Score = 58.0 bits (138), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 25/137 (18%), Positives = 47/137 (34%), Gaps = 8/137 (5%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
               A   IA  G  V +      +E  AN                 +   ++ + +G V
Sbjct: 315 SDSFAPLSIAKDGSPVGNM---TSAEVDANGFVRASFDTGVSRIIYQVPLVDLPNPNGMV 371

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIV-----KYPNVNVLVETADMRETNRLYMANLQ 116
            + +     S     F         +G +     +    +V  E  DM +T R Y +N +
Sbjct: 372 SMDQQTYQPSPDSGSFFLWDAGDGPTGDIVAFARQESATDVARELTDMIQTQRAYSSNAK 431

Query: 117 TIKQSHDMMTTTLDLLR 133
            I+   +M+  T +++R
Sbjct: 432 VIQTVDEMLQETTNIIR 448



 Score = 42.6 bits (98), Expect = 0.017,   Method: Composition-based stats.
 Identities = 22/97 (22%), Positives = 40/97 (41%), Gaps = 2/97 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             + +S + + +GL   + R+  IS+NIAN+ T G       +    IS     + +GGV
Sbjct: 16  MTISSSLNASVAGLNANATRLATISDNIANSSTFGYRRVEADFESLVISGRGGSYSAGGV 75

Query: 62  R--VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVN 96
           R   +++     + V   +P        G +    V 
Sbjct: 76  RASTQRLIDQGGSIVSSSNPTDLAVRDRGFLPVARVT 112


>gi|225551767|ref|ZP_03772710.1| flagellar hook-basal body complex protein [Borrelia sp. SV1]
 gi|225371562|gb|EEH00989.1| flagellar hook-basal body complex protein [Borrelia sp. SV1]
          Length = 282

 Score = 58.0 bits (138), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 30/69 (43%), Gaps = 1/69 (1%)

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           I    S   +E D        +  ++  NVN + E   M E NR Y AN +TI+    ++
Sbjct: 213 IDTKTSGKAQEIDVSLRPKIETETLEASNVNAVKEMVLMIEINRAYEANQKTIQTEDSLL 272

Query: 126 TTTLD-LLR 133
              ++ + +
Sbjct: 273 GKLINEIGK 281



 Score = 45.2 bits (105), Expect = 0.003,   Method: Composition-based stats.
 Identities = 11/71 (15%), Positives = 27/71 (38%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++   + A SG+  +  ++  +S N+AN    G        +         ++  G  + 
Sbjct: 1  MVRGIYTAASGMMAERRKLDTVSNNLANIDLIGYKKDLSIQKAFPEILIRRLNDDGLYKF 60

Query: 64 KKIGVDQSTFV 74
           K  ++ +  V
Sbjct: 61 PKGHLETAPVV 71


>gi|296531727|ref|ZP_06894555.1| flagellar basal-body rod protein FlgG [Roseomonas cervicalis ATCC
           49957]
 gi|296267943|gb|EFH13742.1| flagellar basal-body rod protein FlgG [Roseomonas cervicalis ATCC
           49957]
          Length = 260

 Score = 58.0 bits (138), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 18/128 (14%), Positives = 38/128 (29%), Gaps = 4/128 (3%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            +  + ++      V   +   +    AN +       +          E  +   GG +
Sbjct: 135 PIQPAINVPIDARDVTVNQAGEVLVTQANGQQQNAGRLNLFLFP----NEAGLEAIGGNK 190

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
             +                      G ++  NVNV+ E   +    R Y  N + I+ + 
Sbjct: 191 FLETEASGQPNQGLPSDPGYARVRQGYLEASNVNVVQEITQLIAAQRAYEMNSKVIEATD 250

Query: 123 DMMTTTLD 130
            M+ T  +
Sbjct: 251 QMLQTANN 258



 Score = 42.6 bits (98), Expect = 0.019,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 23/41 (56%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          + + +IA +G+  Q   +++I+ NIAN  TT  T     ++
Sbjct: 1  MRAMNIAATGMQAQQTNVEVIAHNIANVSTTAFTRRKAEFQ 41


>gi|77918787|ref|YP_356602.1| flagellar biosynthesis, hook protein [Pelobacter carbinolicus DSM
           2380]
 gi|77544870|gb|ABA88432.1| flagellar biosynthesis, hook protein [Pelobacter carbinolicus DSM
           2380]
          Length = 413

 Score = 58.0 bits (138), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 16/113 (14%), Positives = 34/113 (30%), Gaps = 2/113 (1%)

Query: 23  QIISENIANARTTGDTPGSDPYRRKTISFEEVMH--GSGGVRVKKIGVDQSTFVEEFDPG 80
            I  +N  N              R  ++           G  +     +           
Sbjct: 301 NISIDNEGNVLAKYSNGEEIAKSRIVLAKFSSFSGLRKEGASLFSATGESGPPRIGVPGT 360

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
                 +  ++   V++  E   M  T R + AN + I  + +M++  ++L R
Sbjct: 361 ELGNIFTNALEQSTVDLAAEFVKMITTQRGFQANSKVITTTDEMLSELINLKR 413



 Score = 34.5 bits (77), Expect = 5.7,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 17/43 (39%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
            L ++ +   SG+      M +I  NIAN  T G       +
Sbjct: 1  MALSSALYSGISGMNTNGTAMSVIGNNIANTNTVGFKSSRTVF 43


>gi|332305617|ref|YP_004433468.1| flagellar basal-body rod protein FlgG [Glaciecola agarilytica
           4H-3-7+YE-5]
 gi|332172946|gb|AEE22200.1| flagellar basal-body rod protein FlgG [Glaciecola agarilytica
           4H-3-7+YE-5]
          Length = 262

 Score = 58.0 bits (138), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 19/115 (16%), Positives = 32/115 (27%)

Query: 16  AVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVE 75
             Q   +    E  A+ R   D                 +   G     +     +    
Sbjct: 146 DAQQITISQDGEVSASIRGQADPQVLGQISLSDFVNMTGLQPIGQNLYVETATSGAPIQG 205

Query: 76  EFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
                       G ++  NVNV  E  ++ E+ RLY  N + I     M+   + 
Sbjct: 206 VPGLEGLGTVVQGALETSNVNVTEELVNLIESQRLYEMNSKVISAVDSMLGQVIQ 260



 Score = 38.3 bits (87), Expect = 0.32,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 19/41 (46%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  +  I+ +GL      + +IS N+ANA T G       +
Sbjct: 1  MHPALWISKTGLDAAQTDVAVISNNLANASTVGFKKDRAIF 41


>gi|205355740|ref|ZP_03222510.1| flagellar hook subunit protein [Campylobacter jejuni subsp. jejuni
           CG8421]
 gi|205346517|gb|EDZ33150.1| flagellar hook subunit protein [Campylobacter jejuni subsp. jejuni
           CG8421]
          Length = 852

 Score = 58.0 bits (138), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 23/106 (21%), Positives = 39/106 (36%)

Query: 28  NIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANAS 87
           NI    T G T         +++    +   GG   K      +  V E   G      +
Sbjct: 747 NILGEFTNGKTFAVAKMAMASVANNSGLEEIGGNLFKVTANSGAIVVGEAGTGGRGEMKT 806

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             ++  NV++     ++    R Y AN +TI  S  M+ T + L +
Sbjct: 807 SALEMSNVDLSRSLTELIIIQRGYQANSKTISTSDQMLQTLIQLKQ 852



 Score = 35.2 bits (79), Expect = 3.0,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 25/72 (34%), Gaps = 4/72 (5%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR----RKTISFEEVMHGSG 59
          ++ S     SGL      M +   NI+N  TTG       +     +          G G
Sbjct: 1  MMRSLWSGVSGLQAHQVAMDVEGNNISNVNTTGFKYSRADFGTMFSQTVKIATAPTDGRG 60

Query: 60 GVRVKKIGVDQS 71
          G    +IG+  S
Sbjct: 61 GSNPLQIGLGVS 72


>gi|296283228|ref|ZP_06861226.1| flagellar basal body rod protein FlgG [Citromicrobium bathyomarinum
           JL354]
          Length = 261

 Score = 58.0 bits (138), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 23/126 (18%), Positives = 38/126 (30%), Gaps = 3/126 (2%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
               I    + V  +R   +   IA           +     T   E  +   G      
Sbjct: 138 PGITIPQGAVDVAVSRTGEVQIKIAGETEMQTVGQIE---LATFVNEAGLEAKGDNLFLA 194

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
                   +         + A G V+  NVN + E   +    R Y  N + +K + +M+
Sbjct: 195 TAASGEPTIAAPGEPGFGSVAQGFVEASNVNPVAEITALITAQRAYEMNSRVVKTADEML 254

Query: 126 TTTLDL 131
            TT  L
Sbjct: 255 GTTSQL 260



 Score = 42.6 bits (98), Expect = 0.019,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 21/41 (51%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          + S  IA +G+  Q   + +IS NIAN  TTG       ++
Sbjct: 1  MRSLSIAGTGMLAQQTNVDVISNNIANMNTTGFKRQRAQFQ 41


>gi|291280096|ref|YP_003496931.1| flagellar hook protein FlgE [Deferribacter desulfuricans SSM1]
 gi|290754798|dbj|BAI81175.1| flagellar hook protein FlgE [Deferribacter desulfuricans SSM1]
          Length = 817

 Score = 58.0 bits (138), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 36/85 (42%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            + +E +   G     +        V +   G   + A+  ++  NV++  E  +M  T 
Sbjct: 733 FTNQEGLLKVGDTLFAETPNSGQAAVGQATTGGRGSIAASALENSNVDLAREFVNMITTQ 792

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R + AN + I  S +++   ++L R
Sbjct: 793 RGFQANSRVITTSDELLQELMNLKR 817


>gi|109899400|ref|YP_662655.1| flagellar basal body rod protein FlgG [Pseudoalteromonas atlantica
           T6c]
 gi|109701681|gb|ABG41601.1| flagellar basal-body rod protein FlgG [Pseudoalteromonas atlantica
           T6c]
          Length = 262

 Score = 58.0 bits (138), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 19/115 (16%), Positives = 32/115 (27%)

Query: 16  AVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVE 75
             Q   +    E  A+ R   D                 +   G     +     +    
Sbjct: 146 DAQQITISQDGEVSASIRGQADPQVLGQISLSDFVNMTGLQPIGQNLYVETATSGAPIQG 205

Query: 76  EFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
                       G ++  NVNV  E  ++ E+ RLY  N + I     M+   + 
Sbjct: 206 VPGLEGLGTVVQGALETSNVNVTEELVNLIESQRLYEMNSKVISAVDSMLGQVIQ 260



 Score = 38.3 bits (87), Expect = 0.33,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 19/41 (46%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  +  I+ +GL      + +IS N+ANA T G       +
Sbjct: 1  MHPALWISKTGLDAAQTDVAVISNNLANASTVGFKKDRAIF 41


>gi|332701537|ref|ZP_08421625.1| flagellar hook-basal body protein [Desulfovibrio africanus str.
           Walvis Bay]
 gi|332551686|gb|EGJ48730.1| flagellar hook-basal body protein [Desulfovibrio africanus str.
           Walvis Bay]
          Length = 532

 Score = 58.0 bits (138), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 15/86 (17%), Positives = 30/86 (34%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
               + +   GG    +            + G     AS  ++  NV++  E   +    
Sbjct: 447 FDNYQGLKQEGGNLFSETTESGMARTGTANVGGRGDIASATLEQSNVDMSTEMVRLITIQ 506

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLRD 134
           R + AN + I  +  +M   ++L R 
Sbjct: 507 RGFQANGKVITTTDTLMGEVINLKRS 532



 Score = 41.4 bits (95), Expect = 0.037,   Method: Composition-based stats.
 Identities = 22/86 (25%), Positives = 29/86 (33%), Gaps = 4/86 (4%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPG----SDPYRRKTISFEEVMHG 57
            L  S   A SGL   S  M +I  N+ANA T G   G     D +  +  +       
Sbjct: 1  MGLSNSMWTAISGLTSHSESMSVIGNNLANANTLGFKSGTVHFEDMFYSQLSTASGFDQV 60

Query: 58 SGGVRVKKIGVDQSTFVEEFDPGHPV 83
            G RV  I  + +    E       
Sbjct: 61 GHGSRVSTIYTNYTQGPHEASSESTH 86


>gi|283956177|ref|ZP_06373662.1| flagellar hook protein FlgE [Campylobacter jejuni subsp. jejuni
           1336]
 gi|283792331|gb|EFC31115.1| flagellar hook protein FlgE [Campylobacter jejuni subsp. jejuni
           1336]
          Length = 848

 Score = 58.0 bits (138), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 23/106 (21%), Positives = 39/106 (36%)

Query: 28  NIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANAS 87
           NI    T G T         +++    +   GG   K      +  V E   G      +
Sbjct: 743 NILGEFTNGKTFAVAKIAMASVANNSGLEEIGGNLFKVTANSGNIVVGEAGTGGRGEMKT 802

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             ++  NV++     ++    R Y AN +TI  S  M+ T + L +
Sbjct: 803 SALEMSNVDLSRSLTELIIIQRGYQANSKTISTSDQMLQTLIQLKQ 848



 Score = 34.8 bits (78), Expect = 3.8,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 25/72 (34%), Gaps = 4/72 (5%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR----RKTISFEEVMHGSG 59
          ++ S     SGL      M +   NI+N  TTG       +     +          G G
Sbjct: 1  MMRSLWSGVSGLQAHQVAMDVEGNNISNVNTTGFKYSRADFGTMFSQTVKIATTPTDGRG 60

Query: 60 GVRVKKIGVDQS 71
          G    +IG+  S
Sbjct: 61 GQNPLQIGLGVS 72


>gi|167576664|ref|ZP_02369538.1| flagellar basal body rod protein FlgG [Burkholderia thailandensis
           TXDOH]
          Length = 258

 Score = 58.0 bits (138), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 19/113 (16%), Positives = 30/113 (26%), Gaps = 3/113 (2%)

Query: 24  IISENIANARTTGDTPGSDPYRRKT---ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPG 80
            I EN   A T           +           +   G     +          E    
Sbjct: 146 AIGENGIVAATMPGASSPSEVGQLQLANFVNPAGLLALGDNLYMETVASGPPNEGEAGTD 205

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
                  G ++  NV V+ E  DM    R Y  N + +  + +M+       R
Sbjct: 206 VFGKIKQGALEGSNVQVVEEMVDMIAAQRTYEMNTKVLSAADNMLQHLSQAAR 258



 Score = 37.5 bits (85), Expect = 0.55,   Method: Composition-based stats.
 Identities = 11/37 (29%), Positives = 19/37 (51%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
            I+ +GL  Q A++Q ++ N+AN  T G       +
Sbjct: 1  MWISKTGLQAQDAKLQAVANNLANVNTVGFKRDRVVF 37


>gi|114762164|ref|ZP_01441632.1| flagellar basal-body rod protein FlgG [Pelagibaca bermudensis
           HTCC2601]
 gi|114545188|gb|EAU48191.1| flagellar basal-body rod protein FlgG [Roseovarius sp. HTCC2601]
          Length = 261

 Score = 58.0 bits (138), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 12/82 (14%), Positives = 27/82 (32%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +  + +   GG    +                      G ++  +V+ + E  ++ E  
Sbjct: 178 FTNPKGLEAIGGNLFTETEASGPPIQTTAGQDGLGTFRHGYLEDSSVDPVYEITELIEAQ 237

Query: 109 RLYMANLQTIKQSHDMMTTTLD 130
           R Y  N + I  +  M+  T+ 
Sbjct: 238 RGYELNSKVISAADQMLGATVQ 259



 Score = 44.1 bits (102), Expect = 0.007,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 23/41 (56%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          + +  IA +G++ Q  R+++IS N++N  TTG       + 
Sbjct: 1  MRALKIAATGMSAQQMRVEVISNNLSNMSTTGYNARRAEFA 41


>gi|37360908|dbj|BAC98362.1| flagellar basal-body rod protein [Burkholderia glumae]
          Length = 251

 Score = 58.0 bits (138), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 31/85 (36%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
           T    E ++  G     +     +  V         +   G V+  NVNV  E  +M +T
Sbjct: 166 TFINPEGLNALGQNLFAETTSSGAPNVTTPGLNGAGSLNQGYVESSNVNVXQELVNMIQT 225

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLL 132
            R Y  N + +  S  M+ T   + 
Sbjct: 226 QRAYEINSKAVTTSDQMLQTVTQMK 250


>gi|308050022|ref|YP_003913588.1| flagellar basal-body rod protein FlgG [Ferrimonas balearica DSM
           9799]
 gi|307632212|gb|ADN76514.1| flagellar basal-body rod protein FlgG [Ferrimonas balearica DSM
           9799]
          Length = 261

 Score = 58.0 bits (138), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 22/131 (16%), Positives = 40/131 (30%), Gaps = 3/131 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             L+ +  I    L V      I++  IA      +            +    +   G  
Sbjct: 134 MPLVPAVEIPEDALTVTVGSDGIVTAQIAGDAVPQELGQIT---LANFTNPAGLEAFGNN 190

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
             ++                      G ++  NVNV+ E  +M  T R Y  N + +  +
Sbjct: 191 LYRETAASGVAIEGIPGDAAIGQLKQGTLEGANVNVVEEMVEMISTQRAYEMNAKVVSST 250

Query: 122 HDMMTTTLDLL 132
            DM+     +L
Sbjct: 251 DDMLKYLNQVL 261



 Score = 42.2 bits (97), Expect = 0.027,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 21/41 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          + ++  ++ +GL  Q  +M  I+ N+AN  TTG       +
Sbjct: 1  MQSALWVSKTGLTAQDTKMTTIANNLANVNTTGFKRDRVSF 41


>gi|163744346|ref|ZP_02151706.1| flagellar hook protein FlgE [Oceanibulbus indolifex HEL-45]
 gi|161381164|gb|EDQ05573.1| flagellar hook protein FlgE [Oceanibulbus indolifex HEL-45]
          Length = 422

 Score = 58.0 bits (138), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 18/106 (16%), Positives = 38/106 (35%), Gaps = 20/106 (18%)

Query: 28  NIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANAS 87
           N+AN        G+     +      + +                           +  S
Sbjct: 337 NVANPDQMRSVDGNAYVATRDSGAVSLGNP--------------------MLNGLGSINS 376

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             ++  NV++  E  D+ +T R Y ++ + I  S +M++ TL++ R
Sbjct: 377 NALEGSNVDIAQELTDLIQTQRAYSSSAKIITTSDEMLSETLNIKR 422



 Score = 40.6 bits (93), Expect = 0.078,   Method: Composition-based stats.
 Identities = 16/35 (45%), Positives = 21/35 (60%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTG 36
            + ++  I  SGL   S+R+Q IS NIANA T G
Sbjct: 1  MSITSALQIGVSGLQANSSRVQNISSNIANANTVG 35


>gi|24215548|ref|NP_713029.1| flagellar hook protein FlgE [Leptospira interrogans serovar Lai
           str. 56601]
 gi|45657072|ref|YP_001158.1| flagellar hook protein FlgE [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|24196693|gb|AAN50047.1| flagellar hook protein FlgE [Leptospira interrogans serovar Lai
           str. 56601]
 gi|45600309|gb|AAS69795.1| FlgE [Leptospira interrogans serovar Copenhageni str. Fiocruz
           L1-130]
          Length = 464

 Score = 58.0 bits (138), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 18/86 (20%), Positives = 32/86 (37%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
             +    +  +G              + E          +G+++  NV++  +  DM  T
Sbjct: 379 VFNNPAGLDKAGDTMFSYSMNSGEPNIGEAGVQGRGKINAGLLEMSNVDLSDQFTDMIVT 438

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R + AN +TI  S  M+   L L R
Sbjct: 439 QRGFQANSRTITTSDQMIQEVLGLKR 464



 Score = 36.8 bits (83), Expect = 1.0,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 19/42 (45%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S +   SGL     RM +I  NI+N  T G       ++
Sbjct: 1  MMRSLYSGVSGLKNHQVRMDVIGNNISNVNTHGFKTERVTFQ 42


>gi|83955138|ref|ZP_00963794.1| flagellar basal-body rod protein FlgG [Sulfitobacter sp. NAS-14.1]
 gi|83840467|gb|EAP79640.1| flagellar basal-body rod protein FlgG [Sulfitobacter sp. NAS-14.1]
          Length = 261

 Score = 58.0 bits (138), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 31/85 (36%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
           T   E  +   G   +++                      G ++  NVN++ +  D+   
Sbjct: 177 TFLNEAGLKPVGDNLMEQTAASGEPVQNVPGTPGVGITRQGYLEQSNVNIIQQITDLISA 236

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLL 132
            R Y  N + I+ +  +MTTT  + 
Sbjct: 237 QRAYEMNSKAIETADQIMTTTNQIK 261



 Score = 45.2 bits (105), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 23/41 (56%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          + +  IA +G+  Q   + +I+ NIANA TTG   G   ++
Sbjct: 1  MKALGIAATGMLAQQTNVDVIANNIANANTTGFKSGRAAFQ 41


>gi|146281773|ref|YP_001171926.1| flagellar basal body rod protein FlgG [Pseudomonas stutzeri A1501]
 gi|145569978|gb|ABP79084.1| flagellar basal-body rod protein FlgG [Pseudomonas stutzeri A1501]
          Length = 261

 Score = 58.0 bits (138), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 25/78 (32%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +   G     +     +  V               ++  NV+V+ E  +M  T 
Sbjct: 178 FINPAGLQAMGSNLFLETAASGAPQVSTPGLNGLGTVLQNTLENSNVSVVEELVNMITTQ 237

Query: 109 RLYMANLQTIKQSHDMMT 126
           R Y  N + I  +  M++
Sbjct: 238 RAYEMNSKVISTADQMLS 255



 Score = 41.4 bits (95), Expect = 0.037,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 22/42 (52%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ +  ++ +GL+ Q   +  IS N+AN  TTG       ++
Sbjct: 1  MLPALWVSKTGLSAQDMNLTTISNNLANVSTTGFKRDRAEFQ 42


>gi|116328901|ref|YP_798621.1| flagellar hook protein FlgE [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116330492|ref|YP_800210.1| flagellar hook protein FlgE [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|116121645|gb|ABJ79688.1| Endoflagellar hook protein [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116124181|gb|ABJ75452.1| Endoflagellar hook protein [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 464

 Score = 58.0 bits (138), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 18/86 (20%), Positives = 32/86 (37%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
             +    +  +G              + E          +G+++  NV++  +  DM  T
Sbjct: 379 VFNNPAGLDKAGDTMFAYSMNSGEPNIGEAGVQGRGKINAGLLEMSNVDLSDQFTDMIVT 438

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R + AN +TI  S  M+   L L R
Sbjct: 439 QRGFQANSRTITTSDQMIQEVLGLKR 464



 Score = 36.8 bits (83), Expect = 1.1,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 19/42 (45%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S +   SGL     RM +I  NI+N  T G       ++
Sbjct: 1  MMRSLYSGVSGLKNHQVRMDVIGNNISNVNTHGFKTERVTFQ 42


>gi|114320057|ref|YP_741740.1| flagellar basal body FlaE domain-containing protein
           [Alkalilimnicola ehrlichii MLHE-1]
 gi|114226451|gb|ABI56250.1| flagellar basal body FlaE domain protein [Alkalilimnicola ehrlichii
           MLHE-1]
          Length = 430

 Score = 58.0 bits (138), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 17/127 (13%), Positives = 34/127 (26%), Gaps = 13/127 (10%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
            +S  ++  G                   T G +             +E +   G     
Sbjct: 316 FSSLDVSEDGTIFARF-------------TNGQSEVLGRVGVTKFPSQENLQPVGDTEWV 362

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
                    V         +  SG ++  NV++  +   M    R + AN + I     +
Sbjct: 363 ATFEAGEPVVGTAGTSDFGSIESGALEQSNVDISEQLVKMIVAQRNFSANAKMISTEDQI 422

Query: 125 MTTTLDL 131
               L++
Sbjct: 423 TQEILNI 429



 Score = 34.8 bits (78), Expect = 4.0,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 17/39 (43%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          S   + +GL    + + I  +NIAN+ T G       + 
Sbjct: 2  SFGTSLTGLNAAQSELNITGDNIANSSTWGFKESRPEFA 40


>gi|288573021|ref|ZP_06391378.1| protein of unknown function DUF1078 domain protein
           [Dethiosulfovibrio peptidovorans DSM 11002]
 gi|288568762|gb|EFC90319.1| protein of unknown function DUF1078 domain protein
           [Dethiosulfovibrio peptidovorans DSM 11002]
          Length = 875

 Score = 58.0 bits (138), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 18/100 (18%), Positives = 34/100 (34%)

Query: 34  TTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
             G   G         +  + +  +G     K        +           A   ++Y 
Sbjct: 776 DNGQNRGLYKMALAMFANPQGLVKTGNTCFSKSINSGDPSIVNAMVEGAGTIAGSSLEYS 835

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           NV++  E  D+  T R + A+ + I  S  ++   L+L R
Sbjct: 836 NVDITEEFTDLITTQRGFQASARVITTSDSVLEELLNLKR 875



 Score = 39.9 bits (91), Expect = 0.14,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 18/42 (42%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S     SG      R+ ++  NIAN  T G    +  ++
Sbjct: 1  MLRSLLTGVSGAKAHQKRLDVVGNNIANVNTVGFKKSTVVFQ 42


>gi|220913724|ref|YP_002489033.1| hypothetical protein Achl_2983 [Arthrobacter chlorophenolicus A6]
 gi|219860602|gb|ACL40944.1| protein of unknown function DUF1078 domain protein [Arthrobacter
           chlorophenolicus A6]
          Length = 390

 Score = 58.0 bits (138), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 17/100 (17%), Positives = 35/100 (35%)

Query: 34  TTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
           + G             +    +  +GG      G   +  V           A+G ++  
Sbjct: 291 SNGSREVLARVALARFANPGGLEKAGGSSYVATGNSGAAQVGTPGQAGMGTLATGSLEMS 350

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           NV++  E  ++    R + AN + I  S +++    +L R
Sbjct: 351 NVDLSQEFTNLIVAQRGFQANARIITTSDEVLQELSNLKR 390



 Score = 34.8 bits (78), Expect = 4.3,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 19/42 (45%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S +   SGL      + +   NIAN  TTG    +  ++
Sbjct: 1  MLRSLYSGISGLRAHQTMLDVTGNNIANVNTTGFKASATQFQ 42


>gi|315930325|gb|EFV09413.1| flagellar hook protein FlgE [Campylobacter jejuni subsp. jejuni
           305]
          Length = 864

 Score = 58.0 bits (138), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 23/106 (21%), Positives = 39/106 (36%)

Query: 28  NIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANAS 87
           NI    T G T         +++    +   GG   K      +  V E   G      +
Sbjct: 759 NILGEFTNGKTFAVAKIAMASVANNSGLEEIGGNLFKVTANSGNIVVGEAGTGGRGEMKT 818

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             ++  NV++     ++    R Y AN +TI  S  M+ T + L +
Sbjct: 819 SALEMSNVDLSRSLTELIIIQRGYQANSKTISTSDQMLQTLIQLKQ 864


>gi|229591869|ref|YP_002873988.1| flagellar basal body rod protein FlgG [Pseudomonas fluorescens
           SBW25]
 gi|229363735|emb|CAY51140.1| flagellar basal-body rod protein [Pseudomonas fluorescens SBW25]
          Length = 261

 Score = 58.0 bits (138), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 14/124 (11%), Positives = 33/124 (26%), Gaps = 3/124 (2%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            L  +  +              +S  +A       +      +         +   G   
Sbjct: 135 ALEPAVVVPADAKTFTVGNDGTVSITVA---GNPASQVIGNLQTADFINPAGLQAMGNNL 191

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
             +     +  +               ++  NV+ + E  +M  T R Y  N + I  + 
Sbjct: 192 FLETASSGAPQIGTPGLNGFGTTLQSTLETSNVSTVEEMVNMITTQRAYEMNSKVISTAD 251

Query: 123 DMMT 126
            M++
Sbjct: 252 QMLS 255



 Score = 41.4 bits (95), Expect = 0.043,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 22/42 (52%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ +  +A +GL+ Q   +  IS N+AN  TTG       ++
Sbjct: 1  MLPALWVAKTGLSAQDTNLTTISNNLANVSTTGFKRDRAEFQ 42


>gi|308273544|emb|CBX30146.1| Flagellar basal-body rod protein flgG [uncultured Desulfobacterium
           sp.]
          Length = 260

 Score = 58.0 bits (138), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 17/130 (13%), Positives = 42/130 (32%), Gaps = 4/130 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           L  +  I +  + +   +   ++        +G           + +    +   G    
Sbjct: 135 LQPAMTIPSDTMTISIDKSGTVTA----FGPSGQGTVVGVIELHSFTNPAGLFSMGHNLY 190

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
           +K                    A G ++  NV+V+ E   M    R Y  + ++I+ + +
Sbjct: 191 RKTDASGDAIAAAPGSDGMGTIAQGFIEMSNVDVVEEMVAMIMAQRAYEVSSKSIQTADN 250

Query: 124 MMTTTLDLLR 133
           M+    ++ R
Sbjct: 251 MLQMANNIKR 260



 Score = 39.5 bits (90), Expect = 0.16,   Method: Composition-based stats.
 Identities = 14/91 (15%), Positives = 26/91 (28%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++     A SG+  Q   + +IS N+AN  T G       ++            +     
Sbjct: 1  MLRGMWSAASGMDAQKMMIDVISNNLANVNTVGFKKSRPDFQDLMYQTMSQGGSTTTSGD 60

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIVKYPN 94
          +  G  Q            +       +  N
Sbjct: 61 QIPGGIQVGMGTMPVSVQKMFMQGDFKETKN 91


>gi|307546968|ref|YP_003899447.1| flagellar hook protein FlgE [Halomonas elongata DSM 2581]
 gi|307218992|emb|CBV44262.1| flagellar hook protein FlgE [Halomonas elongata DSM 2581]
          Length = 422

 Score = 58.0 bits (138), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 28/109 (25%), Positives = 40/109 (36%), Gaps = 4/109 (3%)

Query: 23  QIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHP 82
             I  N  N ++      S    R      E +   G              V     G  
Sbjct: 317 GTIVRNYTNEQSRPAGQVSLASFRNP----EGLDPVGDNAWAATAASGQELVGAPGTGQL 372

Query: 83  VANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
               SG+V+  NV++  E  DM  T R Y AN QTIK   +++ T ++L
Sbjct: 373 GGIQSGVVESSNVDMAQELVDMIVTQRAYQANSQTIKTQDEVLQTAINL 421


>gi|304570583|ref|YP_388203.2| flagellar hook protein FlgE [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 547

 Score = 58.0 bits (138), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 13/85 (15%), Positives = 30/85 (35%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
              ++ +   GG    +            +        S  ++  NV++  E  +M  T 
Sbjct: 463 FQSKDNLRREGGNLFSESNASGLAAPGPANANGYGTVNSNSLEQSNVDLAKEFVNMITTQ 522

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R + +N + I  +  M+   + + R
Sbjct: 523 RGFQSNSKVITTTDTMLEVVIQMKR 547



 Score = 39.5 bits (90), Expect = 0.16,   Method: Composition-based stats.
 Identities = 21/86 (24%), Positives = 26/86 (30%), Gaps = 4/86 (4%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDT----PGSDPYRRKTISFEEVMHG 57
            L AS     SGL     RM ++  NIAN  T G         D   +   +       
Sbjct: 1  MSLTASMWTGISGLLAHGERMNVLGNNIANVNTVGFKGARMDFEDFISQDVNTASGTRQV 60

Query: 58 SGGVRVKKIGVDQSTFVEEFDPGHPV 83
            GV +  I  D S    E       
Sbjct: 61 GRGVGIGTIYGDFSQGSFETTTEATD 86


>gi|288960286|ref|YP_003450626.1| flagellar hook protein [Azospirillum sp. B510]
 gi|288912594|dbj|BAI74082.1| flagellar hook protein [Azospirillum sp. B510]
          Length = 871

 Score = 58.0 bits (138), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 18/86 (20%), Positives = 31/86 (36%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
           T +    +    G    +          + +     A  +  V+  NV++  E   M  T
Sbjct: 786 TFNNPNALQRESGGVFLESEDAGKPNFNDPETNGAGAVVANSVESSNVDIADEFTKMIVT 845

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y AN + +  S +M+   L L R
Sbjct: 846 QRSYSANAKIVTTSDEMLQEVLGLKR 871



 Score = 45.2 bits (105), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 44/109 (40%), Gaps = 2/109 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             +  S   A  GL  QS  +  IS+NIAN+ T G       +    +   + +H  GGV
Sbjct: 1   MSIFGSMTTAVLGLNAQSKALGHISDNIANSSTIGYKRVDSAFETMVLQSSQRLHEPGGV 60

Query: 62  RVKKIGVD--QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
             + + ++  Q +  +   P +      G      VNV   T+ + +T 
Sbjct: 61  TAQPVFMNSIQGSLTQVQSPTNIAIQGQGFFSVSKVNVQNSTSTLVQTQ 109


>gi|254511992|ref|ZP_05124059.1| flagellar basal-body rod protein FlgG [Rhodobacteraceae bacterium
           KLH11]
 gi|221535703|gb|EEE38691.1| flagellar basal-body rod protein FlgG [Rhodobacteraceae bacterium
           KLH11]
          Length = 261

 Score = 58.0 bits (138), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 19/115 (16%), Positives = 36/115 (31%)

Query: 16  AVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVE 75
             +S  +    E  A    T +      +   + S  + +   G    K+     +  V 
Sbjct: 145 DARSISINAAGEVYAYFDDTAEGQLLGEFTMASFSNAKGLEAVGSNLFKETEASGAPVVG 204

Query: 76  EFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
                       G ++  +V+ + E  ++ E  R Y  N + I     MM  T  
Sbjct: 205 RPGEDGLGTLRQGYLEDSSVDAVREVTELIEAQRGYEMNAKVISAVDQMMGATTQ 259



 Score = 44.9 bits (104), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 21/41 (51%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          + +  IA +G+  Q  R++ IS N+AN  TTG       + 
Sbjct: 1  MRALKIAATGMTAQQMRVETISNNLANMNTTGYNTRRAEFA 41


>gi|219685599|ref|ZP_03540415.1| flagellar hook-basal body complex protein [Borrelia garinii Far04]
 gi|219672877|gb|EED29900.1| flagellar hook-basal body complex protein [Borrelia garinii Far04]
          Length = 282

 Score = 58.0 bits (138), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 17/94 (18%), Positives = 36/94 (38%), Gaps = 12/94 (12%)

Query: 41  SDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVE 100
            +P   K       +      + ++I +     +            +G ++  NVN + E
Sbjct: 199 ENPRFLKKQGNSLWVDTKTSGKAQEIDISLRPKI-----------ETGALEASNVNAVKE 247

Query: 101 TADMRETNRLYMANLQTIKQSHDMMTTTLD-LLR 133
              M E NR Y AN +TI+    ++   ++ + +
Sbjct: 248 MVLMIEINRAYEANQKTIQTEDSLLGKLINEIGK 281



 Score = 44.9 bits (104), Expect = 0.004,   Method: Composition-based stats.
 Identities = 11/71 (15%), Positives = 28/71 (39%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++   + A SG+  +  ++ ++S N+AN    G        +         ++  G  + 
Sbjct: 1  MVRGIYTAASGMMAERHKLDVVSNNLANIDLVGYKKDLSIQKAFPEMLIRRLNDDGLYKF 60

Query: 64 KKIGVDQSTFV 74
           K  ++ +  V
Sbjct: 61 PKGHLETAPIV 71


>gi|78219159|gb|ABB38508.1| flagellar hook protein FlgE [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 527

 Score = 58.0 bits (138), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 13/85 (15%), Positives = 30/85 (35%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
              ++ +   GG    +            +        S  ++  NV++  E  +M  T 
Sbjct: 443 FQSKDNLRREGGNLFSESNASGLAAPGPANANGYGTVNSNSLEQSNVDLAKEFVNMITTQ 502

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R + +N + I  +  M+   + + R
Sbjct: 503 RGFQSNSKVITTTDTMLEVVIQMKR 527


>gi|288958564|ref|YP_003448905.1| flagellar hook protein [Azospirillum sp. B510]
 gi|288910872|dbj|BAI72361.1| flagellar hook protein [Azospirillum sp. B510]
          Length = 881

 Score = 57.6 bits (137), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 18/86 (20%), Positives = 31/86 (36%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
           T +    +    G    +        + +       A  +  V+  NV++  E   M  T
Sbjct: 796 TFNNPNALQRESGGVFVESEGAGKPNLNDPKLNGAGAMVANSVEASNVDIASEFTKMIVT 855

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y AN + +  S +M+   L L R
Sbjct: 856 QRGYSANAKVLTASDEMLQEVLGLKR 881



 Score = 36.4 bits (82), Expect = 1.4,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 30/83 (36%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            +  S   A  GL  QS  +  IS+NIANA T G       ++   +      H  GGV
Sbjct: 1  MSIFGSRSSALMGLVAQSKALGNISDNIANASTAGYKRVDTTFQSMVLQSSPRNHAPGGV 60

Query: 62 RVKKIGVDQSTFVEEFDPGHPVA 84
            +   ++           +  A
Sbjct: 61 TARPSFMNDVQGNLTSVSSNTSA 83


>gi|297530598|ref|YP_003671873.1| fagellar hook-basal body protein [Geobacillus sp. C56-T3]
 gi|297253850|gb|ADI27296.1| fagellar hook-basal body protein [Geobacillus sp. C56-T3]
          Length = 288

 Score = 57.6 bits (137), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 23/44 (52%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  NV++  E  +M    R + AN + I  S +++   ++L +
Sbjct: 245 LEMSNVDLAEEFTEMIVAQRGFQANTRIITTSDEILQELVNLKK 288



 Score = 34.1 bits (76), Expect = 6.6,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 18/42 (42%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S +     +     ++ +I  NIAN  T G   G   ++
Sbjct: 1  MLRSMYSGIGAMRNFQTKLDVIGNNIANVNTYGFKKGRTIFK 42


>gi|225158947|ref|ZP_03725259.1| protein of unknown function DUF1078 [Opitutaceae bacterium TAV2]
 gi|224802442|gb|EEG20702.1| protein of unknown function DUF1078 [Opitutaceae bacterium TAV2]
          Length = 261

 Score = 57.6 bits (137), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 26/64 (40%)

Query: 67  GVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           G+  +                G ++  NV+ L E  D+   +R Y AN + I+   D + 
Sbjct: 194 GLFTAPPAAGPQQMDEPGVIQGYIESSNVSQLREMVDLITISRAYEANQKMIQSRDDTIG 253

Query: 127 TTLD 130
            TL+
Sbjct: 254 KTLE 257


>gi|90422610|ref|YP_530980.1| flagellar basal body rod protein FlgG [Rhodopseudomonas palustris
           BisB18]
 gi|90104624|gb|ABD86661.1| Flagellar basal-body rod FlgG [Rhodopseudomonas palustris BisB18]
          Length = 262

 Score = 57.6 bits (137), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 18/39 (46%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
            ++  NV+ + E  ++    R Y  N + I  + +M  T
Sbjct: 218 YLESSNVDPVKEITELISAQRSYEMNSKVITAADEMAQT 256



 Score = 45.2 bits (105), Expect = 0.003,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 21/40 (52%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          + +  IA +G++ Q   +++I+ NIAN  TT        +
Sbjct: 1  MRALAIAATGMSAQQLNVEVIANNIANINTTSYKRARAEF 40


>gi|57236913|ref|YP_179866.1| flagellar hook protein FlgE [Campylobacter jejuni RM1221]
 gi|57165717|gb|AAW34496.1| flagellar hook protein [Campylobacter jejuni RM1221]
 gi|315059173|gb|ADT73502.1| Flagellar hook subunit protein [Campylobacter jejuni subsp. jejuni
           S3]
          Length = 845

 Score = 57.6 bits (137), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 23/106 (21%), Positives = 39/106 (36%)

Query: 28  NIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANAS 87
           NI    T G T         +++    +   GG   K      +  V E   G      +
Sbjct: 740 NILGEFTNGKTFAVAKIAMASVANNSGLEEIGGNLFKVTANSGAIVVGEAGTGGRGEMKT 799

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             ++  NV++     ++    R Y AN +TI  S  M+ T + L +
Sbjct: 800 SALEMSNVDLSRSLTELIIIQRGYQANSKTISTSDQMLQTLIQLKQ 845



 Score = 34.5 bits (77), Expect = 4.8,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 25/72 (34%), Gaps = 4/72 (5%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR----RKTISFEEVMHGSG 59
          ++ S     SGL      M +   NI+N  TTG       +     +          G G
Sbjct: 1  MMRSLWSGVSGLQAHQVAMDVEGNNISNVNTTGFKYSRADFGTMFSQTVKIATAPTDGRG 60

Query: 60 GVRVKKIGVDQS 71
          G    +IG+  S
Sbjct: 61 GSNPLQIGLGVS 72


>gi|17548566|ref|NP_521906.1| flagellar hook protein FlgE [Ralstonia solanacearum GMI1000]
 gi|17430814|emb|CAD17496.1| probable flagellar hook protein flge [Ralstonia solanacearum
           GMI1000]
          Length = 401

 Score = 57.6 bits (137), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 18/87 (20%), Positives = 32/87 (36%)

Query: 45  RRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
                   + +   GG +  +     +  +     G      S  V+  NV++  E  +M
Sbjct: 314 AMTNFKAPDGLQNIGGNQWVETAESGAPQMGTPGMGSFGLLQSSAVEQSNVDLSAELVNM 373

Query: 105 RETNRLYMANLQTIKQSHDMMTTTLDL 131
               R Y AN QTIK    ++ T + +
Sbjct: 374 IVAQRSYQANAQTIKTEDTILQTLVSM 400



 Score = 36.4 bits (82), Expect = 1.4,   Method: Composition-based stats.
 Identities = 22/113 (19%), Positives = 34/113 (30%), Gaps = 14/113 (12%)

Query: 7   SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY---RRKTISFEEVMHGSGGVRV 63
                 SGL   S  + +I  N+ANA T G    +  +     +++          GV V
Sbjct: 2   GFQQGLSGLDAASKNLDVIGSNVANANTVGYKKSTAEFGDVYARSLVGASDNQIGQGVDV 61

Query: 64  KKIGVD--QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
            K+     Q       +P     N +G  +           D       Y  N
Sbjct: 62  TKVSQSFTQGNVTVTGNPLDIAINGTGFYR---------MVDASSGQVSYTRN 105


>gi|88597739|ref|ZP_01100972.1| flagellar hook protein FlgE [Campylobacter jejuni subsp. jejuni
           84-25]
 gi|88190043|gb|EAQ94019.1| flagellar hook protein FlgE [Campylobacter jejuni subsp. jejuni
           84-25]
          Length = 865

 Score = 57.6 bits (137), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 23/106 (21%), Positives = 39/106 (36%)

Query: 28  NIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANAS 87
           NI    T G T         +++    +   GG   K      +  V E   G      +
Sbjct: 760 NILGEFTNGKTFAVAKIAMASVANNSGLEEIGGNLFKVTANSGNIVVGEAGTGGRGEMKT 819

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             ++  NV++     ++    R Y AN +TI  S  M+ T + L +
Sbjct: 820 SALEMSNVDLSRSLTELIIIQRGYQANSKTISTSDQMLQTLIQLKQ 865



 Score = 34.8 bits (78), Expect = 3.8,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 25/72 (34%), Gaps = 4/72 (5%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR----RKTISFEEVMHGSG 59
          ++ S     SGL      M +   NI+N  TTG       +     +          G G
Sbjct: 1  MMRSLWSGVSGLQAHQVAMDVEGNNISNVNTTGFKYSRADFGTMFSQTVKIATAPTDGRG 60

Query: 60 GVRVKKIGVDQS 71
          G    +IG+  S
Sbjct: 61 GSNPLQIGLGVS 72


>gi|121613214|ref|YP_001001371.1| flagellar hook protein FlgE [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|167006263|ref|ZP_02272021.1| flagellar hook protein FlgE [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|30721660|gb|AAP34261.1| FlgE [Campylobacter jejuni subsp. jejuni 81-176]
 gi|87248993|gb|EAQ71955.1| flagellar hook protein FlgE [Campylobacter jejuni subsp. jejuni
           81-176]
          Length = 838

 Score = 57.6 bits (137), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 23/106 (21%), Positives = 39/106 (36%)

Query: 28  NIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANAS 87
           NI    T G T         +++    +   GG   K      +  V E   G      +
Sbjct: 733 NILGEFTNGKTFAVAKMAMASVANNSGLEEIGGNLFKVTANSGAIVVGEAGTGGRGEMKT 792

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             ++  NV++     ++    R Y AN +TI  S  M+ T + L +
Sbjct: 793 SALEMSNVDLSRSLTELIIIQRGYQANSKTISTSDQMLQTLIQLKQ 838



 Score = 35.2 bits (79), Expect = 3.2,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 25/72 (34%), Gaps = 4/72 (5%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR----RKTISFEEVMHGSG 59
          ++ S     SGL      M +   NI+N  TTG       +     +          G G
Sbjct: 1  MMRSLWSGVSGLQAHQVAMDVEGNNISNVNTTGFKYSRADFGTMFSQTVKIATAPTDGRG 60

Query: 60 GVRVKKIGVDQS 71
          G    +IG+  S
Sbjct: 61 GSNPLQIGLGVS 72


>gi|253702432|ref|YP_003023621.1| flagellar basal body rod protein FlgG [Geobacter sp. M21]
 gi|251777282|gb|ACT19863.1| flagellar basal-body rod protein FlgG [Geobacter sp. M21]
          Length = 262

 Score = 57.6 bits (137), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 15/85 (17%), Positives = 27/85 (31%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            S    ++  G           +                G ++  NV+++ E   M    
Sbjct: 178 FSNPAGLNAIGKNLFLPTDSSGAATTGTAGQNGLGTIEQGFLENSNVSIMEEMVSMIVGQ 237

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R Y  N + I+ S +M+     L R
Sbjct: 238 RAYEINSKAIQASDEMLQQAAGLKR 262



 Score = 42.2 bits (97), Expect = 0.022,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 22/42 (52%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          +I +   A SG+  Q   + +++ N+ANA TTG       ++
Sbjct: 1  MIRALWTAASGMQAQQLNIDVVAHNLANAATTGFKKSRADFQ 42


>gi|154710440|gb|ABS84283.1| FlgG-2 [Treponema paraluiscuniculi]
          Length = 271

 Score = 57.6 bits (137), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 28/114 (24%), Positives = 40/114 (35%), Gaps = 5/114 (4%)

Query: 19  SARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQST----FV 74
             R   I++N        D P  D +    +      +     +       Q+      +
Sbjct: 151 QERYYTINQNGEIYVRPIDRPDVDGFFLDRLKIVTFENVRYLQKKGADTYMQTPVSGAPI 210

Query: 75  EEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
               P  P A   G V+  NVNV+ E   M E NR Y AN +TI+    MM   
Sbjct: 211 AAEGPERPAA-VQGFVEASNVNVVNEMVRMIEVNRAYEANQKTIQAEDGMMGRL 263



 Score = 47.6 bits (111), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 19/96 (19%), Positives = 36/96 (37%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I   + A SG++ Q  R+  I++N+AN  TT        ++         ++  G V+ 
Sbjct: 1  MIRGWYTAASGMSAQQHRLDAIAQNLANVDTTSYKRDVAVHKSFPELLLRRVNDDGVVKN 60

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
               D S  V +   G  V       +  ++    
Sbjct: 61 PFGSSDVSPIVGKLGLGVEVNELFTEFEQGSLKQTQ 96


>gi|310764858|gb|ADP09808.1| Flagellar basal-body rod protein, FlgG [Erwinia sp. Ejp617]
          Length = 260

 Score = 57.6 bits (137), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 14/83 (16%), Positives = 24/83 (28%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
              +  +   GG    +     +                  ++  NVNV  E   M +  
Sbjct: 178 FINDAGLESLGGNLYVETQASGAPNEATPGMDGAGRLKHQYIETSNVNVAEELVTMIQVQ 237

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y  N + +  S  M+     L
Sbjct: 238 RAYEINSKAVSASDQMLQRLAQL 260



 Score = 42.9 bits (99), Expect = 0.014,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 23/61 (37%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I S  IA +GL  Q   M +IS N+AN  +TG       ++                + 
Sbjct: 1  MIRSLWIAKTGLEAQQTNMDVISNNLANVGSTGFKRQRAVFQDLLYQTMRQPGAQASEQT 60

Query: 64 K 64
           
Sbjct: 61 T 61


>gi|326792665|ref|YP_004310486.1| flagellar hook-basal body protein [Clostridium lentocellum DSM
           5427]
 gi|326543429|gb|ADZ85288.1| flagellar hook-basal body protein [Clostridium lentocellum DSM
           5427]
          Length = 271

 Score = 57.6 bits (137), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 20/47 (42%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
            +G ++  NV +  E  ++    R Y  N   IK + DM+     L 
Sbjct: 224 RTGYLEGSNVQIAQEMVNLIIAQRAYEINSTAIKAADDMLGQANQLK 270



 Score = 45.6 bits (106), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/65 (16%), Positives = 23/65 (35%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I + + A SG+  Q   +  IS N+AN  T      +  ++    +     +       
Sbjct: 1  MIRALYTAASGMTAQQLNVDTISNNMANVNTAAYKKETTNFKSLLYTTMGEANDPNAQTA 60

Query: 64 KKIGV 68
            +  
Sbjct: 61 PTVKQ 65


>gi|218563315|ref|YP_002345095.1| flagellar hook protein FlgE [Campylobacter jejuni subsp. jejuni
           NCTC 11168]
 gi|112361022|emb|CAL35823.1| flagellar hook subunit protein [Campylobacter jejuni subsp. jejuni
           NCTC 11168]
          Length = 865

 Score = 57.6 bits (137), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 23/106 (21%), Positives = 39/106 (36%)

Query: 28  NIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANAS 87
           NI    T G T         +++    +   GG   K      +  V E   G      +
Sbjct: 760 NILGEFTNGKTFAVAKIAMASVANNSGLEEIGGNLFKVTANSGNIVVGEAGTGGRGEMKT 819

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             ++  NV++     ++    R Y AN +TI  S  M+ T + L +
Sbjct: 820 SALEMSNVDLSRSLTELIIIQRGYQANSKTISTSDQMLQTLIQLKQ 865



 Score = 34.8 bits (78), Expect = 3.9,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 25/72 (34%), Gaps = 4/72 (5%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR----RKTISFEEVMHGSG 59
          ++ S     SGL      M +   NI+N  TTG       +     +          G G
Sbjct: 1  MMRSLWSGVSGLQAHQVAMDVEGNNISNVNTTGFKYSRADFGTMFSQTVKIATAPTDGRG 60

Query: 60 GVRVKKIGVDQS 71
          G    +IG+  S
Sbjct: 61 GSNPLQIGLGVS 72


>gi|317133480|ref|YP_004092794.1| flagellar hook-basal body protein [Ethanoligenens harbinense
           YUAN-3]
 gi|315471459|gb|ADU28063.1| flagellar hook-basal body protein [Ethanoligenens harbinense
           YUAN-3]
          Length = 326

 Score = 57.6 bits (137), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 20/105 (19%), Positives = 39/105 (37%)

Query: 30  ANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGI 89
           +N  TT            T   +  +  +G     +     S    +   G+     SG 
Sbjct: 222 SNGATTASASDPIIVALATFPNDGGLSQAGNTSFTQSVSSGSPTYIQASNGNSTTLISGA 281

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
           ++  NV++  E  +M  T R + AN + I  +  ++   ++L R 
Sbjct: 282 LEQSNVDLAREFTNMIVTQRGFQANSRVITVADSLLEEIVNLKRS 326



 Score = 38.7 bits (88), Expect = 0.25,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 18/40 (45%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          + + + A +GL  Q   M +I  NIAN  T G       +
Sbjct: 1  MRALNSAVTGLQAQQTAMDVIGNNIANVNTDGFKASRTDF 40


>gi|331007439|ref|ZP_08330616.1| Flagellar basal-body rod protein flgG [gamma proteobacterium
           IMCC1989]
 gi|330418746|gb|EGG93235.1| Flagellar basal-body rod protein flgG [gamma proteobacterium
           IMCC1989]
          Length = 261

 Score = 57.6 bits (137), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 13/97 (13%), Positives = 27/97 (27%)

Query: 30  ANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGI 89
           A+                       +   GG    +                  +   G 
Sbjct: 159 ASILGEATPQELGQITITDFVNPAGLQALGGNVFAQTAASGDPQTGTAGESGLGSIIQGS 218

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           ++  NV+++ E  +M  T R Y  N + +  +  M+ 
Sbjct: 219 LENSNVDIVEEMVNMITTQRAYEMNSKVVSTADQMLQ 255



 Score = 36.4 bits (82), Expect = 1.4,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 22/41 (53%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  + +++ +GL+ Q  ++  IS N+ANA T G       +
Sbjct: 1  MNPALYVSKTGLSAQDRQLTSISNNLANASTIGFKRDRVNF 41


>gi|219684370|ref|ZP_03539314.1| flagellar hook-basal body complex protein [Borrelia garinii PBr]
 gi|219672359|gb|EED29412.1| flagellar hook-basal body complex protein [Borrelia garinii PBr]
          Length = 282

 Score = 57.6 bits (137), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 17/94 (18%), Positives = 36/94 (38%), Gaps = 12/94 (12%)

Query: 41  SDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVE 100
            +P   K       +      + ++I +     +            +G ++  NVN + E
Sbjct: 199 ENPRFLKKQGNSLWVDTKTSGKAQEIDISLRPKI-----------ETGALEASNVNAVKE 247

Query: 101 TADMRETNRLYMANLQTIKQSHDMMTTTLD-LLR 133
              M E NR Y AN +TI+    ++   ++ + +
Sbjct: 248 MVLMIEINRAYEANQKTIQTEDSLLGKLINEIGK 281



 Score = 45.2 bits (105), Expect = 0.003,   Method: Composition-based stats.
 Identities = 16/119 (13%), Positives = 42/119 (35%), Gaps = 4/119 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           ++   + A SG+  +  ++ ++S N+AN    G        +         ++  G  + 
Sbjct: 1   MVRGIYTAASGMMAERHKLDVVSNNLANIDLVGYKKDLSIQKAFPEMLIRRLNDDGLYKF 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
            K  ++ +  V +   G        + +   +       D+  T++ +      I+ S 
Sbjct: 61  PKGHLETAPIVGKLGTGVEENEIYTLFEQGPLKTTSNPLDLALTDQGF----FVIQTSD 115


>gi|126734107|ref|ZP_01749854.1| flagellar basal-body rod protein FlgG [Roseobacter sp. CCS2]
 gi|126716973|gb|EBA13837.1| flagellar basal-body rod protein FlgG [Roseobacter sp. CCS2]
          Length = 261

 Score = 57.6 bits (137), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 22/46 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             G ++  +V+ + E  D+ E  R Y  N + I  +  M++  + L
Sbjct: 215 RQGYLEDSSVDPVREVTDLIEAQRGYELNSKVITAADQMLSAMVQL 260



 Score = 48.3 bits (113), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 23/41 (56%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          + +  IA +G+  Q  R+++IS N+AN  TTG  P    + 
Sbjct: 1  MRALKIAAAGMTAQQMRVEVISNNLANMNTTGYNPRRAEFA 41


>gi|86356312|ref|YP_468204.1| flagellar basal body rod protein FlgG [Rhizobium etli CFN 42]
 gi|86280414|gb|ABC89477.1| flagellar basal-body rod protein [Rhizobium etli CFN 42]
          Length = 262

 Score = 57.6 bits (137), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 26/78 (33%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
              E  +   G    ++        V   D         G ++  NV+ + E  ++    
Sbjct: 178 FVNEAGLQPIGDNLFQETPASGEAVVGNPDEEGFAYMKQGYLESSNVDPVKEITELISAQ 237

Query: 109 RLYMANLQTIKQSHDMMT 126
           R Y  N + I  + +M +
Sbjct: 238 RAYEMNSKVITTADEMAS 255



 Score = 44.9 bits (104), Expect = 0.004,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 21/40 (52%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          + +  IA +G+  Q   +++I+ NIAN  TTG       +
Sbjct: 1  MRALAIAATGMDAQQTNLEVIANNIANINTTGFKRARAEF 40


>gi|315931307|gb|EFV10276.1| flagellar hook protein FlgE [Campylobacter jejuni subsp. jejuni
           327]
          Length = 847

 Score = 57.6 bits (137), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 23/106 (21%), Positives = 39/106 (36%)

Query: 28  NIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANAS 87
           NI    T G T         +++    +   GG   K      +  V E   G      +
Sbjct: 742 NILGEFTNGKTFAVAKIAMASVANNSGLEEIGGNLFKVTANSGNIVVGEAGTGGRGEMKT 801

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             ++  NV++     ++    R Y AN +TI  S  M+ T + L +
Sbjct: 802 SALEMSNVDLSRSLTELIIIQRGYQANSKTISTSDQMLQTLIQLKQ 847


>gi|305432574|ref|ZP_07401735.1| flagellar hook protein FlgE [Campylobacter coli JV20]
 gi|304444285|gb|EFM36937.1| flagellar hook protein FlgE [Campylobacter coli JV20]
          Length = 847

 Score = 57.6 bits (137), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 23/106 (21%), Positives = 39/106 (36%)

Query: 28  NIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANAS 87
           NI    T G T         +++    +   GG   K      +  V E   G      +
Sbjct: 742 NILGEFTNGKTFAVAKIAMASVANNSGLEEIGGNLFKVTANSGNIVVGEAGTGGRGEMKT 801

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             ++  NV++     ++    R Y AN +TI  S  M+ T + L +
Sbjct: 802 SALEMSNVDLSRSLTELIIIQRGYQANSKTISTSDQMLQTLIQLKQ 847



 Score = 34.8 bits (78), Expect = 4.0,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 25/72 (34%), Gaps = 4/72 (5%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR----RKTISFEEVMHGSG 59
          ++ S     SGL      M +   NI+N  TTG       +     +          G G
Sbjct: 1  MMRSLWSGVSGLQAHQVAMDVEGNNISNVNTTGFKYSRADFGTMFSQTVKIATAPTDGRG 60

Query: 60 GVRVKKIGVDQS 71
          G    +IG+  S
Sbjct: 61 GSNPLQIGLGVS 72


>gi|255261552|ref|ZP_05340894.1| flagellar basal-body rod protein FlgG [Thalassiobium sp. R2A62]
 gi|255103887|gb|EET46561.1| flagellar basal-body rod protein FlgG [Thalassiobium sp. R2A62]
          Length = 261

 Score = 57.6 bits (137), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 13/83 (15%), Positives = 30/83 (36%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +    +   G     +      + V E           G ++  +V+ + E  D+ E  
Sbjct: 178 FTNPRGLEAIGNNLFLETSASGPSIVTEPGQDGLGVLRQGYLEDSSVDPVKEVTDLIEAQ 237

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y  N + I  +  M+++ + +
Sbjct: 238 RGYELNSKVITAADQMLSSMVQI 260



 Score = 46.8 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 23/41 (56%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          + +  IA +G+A Q  R+++IS N+AN  TTG       + 
Sbjct: 1  MRALQIAATGMAAQQMRVEVISNNLANMNTTGYNARRAEFA 41


>gi|148926818|ref|ZP_01810497.1| flagellar hook subunit protein [Campylobacter jejuni subsp. jejuni
           CG8486]
 gi|145844543|gb|EDK21650.1| flagellar hook subunit protein [Campylobacter jejuni subsp. jejuni
           CG8486]
          Length = 865

 Score = 57.6 bits (137), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 23/106 (21%), Positives = 39/106 (36%)

Query: 28  NIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANAS 87
           NI    T G T         +++    +   GG   K      +  V E   G      +
Sbjct: 760 NILGEFTNGKTFAVAKIAMASVANNSGLEEIGGNLFKVTANSGNIVVGEAGTGGRGEMKT 819

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             ++  NV++     ++    R Y AN +TI  S  M+ T + L +
Sbjct: 820 SALEMSNVDLSRSLTELIIIQRGYQANSKTISTSDQMLQTLIQLKQ 865



 Score = 34.8 bits (78), Expect = 4.0,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 25/72 (34%), Gaps = 4/72 (5%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR----RKTISFEEVMHGSG 59
          ++ S     SGL      M +   NI+N  TTG       +     +          G G
Sbjct: 1  MMRSLWSGVSGLQAHQVAMDVEGNNISNVNTTGFKYSRADFGTMFSQTVKIATAPTDGRG 60

Query: 60 GVRVKKIGVDQS 71
          G    +IG+  S
Sbjct: 61 GSNPLQIGLGVS 72


>gi|51599026|ref|YP_073214.1| flagellar hook-basal body complex protein [Borrelia garinii PBi]
 gi|51573597|gb|AAU07622.1| flagellar hook-basal body complex protein [Borrelia garinii PBi]
          Length = 282

 Score = 57.6 bits (137), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 17/94 (18%), Positives = 36/94 (38%), Gaps = 12/94 (12%)

Query: 41  SDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVE 100
            +P   K       +      + ++I +     +            +G ++  NVN + E
Sbjct: 199 ENPRFLKKQGNSLWVDTKTSGKAQEIDISLRPKI-----------ETGALEASNVNAVKE 247

Query: 101 TADMRETNRLYMANLQTIKQSHDMMTTTLD-LLR 133
              M E NR Y AN +TI+    ++   ++ + +
Sbjct: 248 MVLMIEINRAYEANQKTIQTEDSLLGKLINEIGK 281



 Score = 45.2 bits (105), Expect = 0.003,   Method: Composition-based stats.
 Identities = 16/119 (13%), Positives = 42/119 (35%), Gaps = 4/119 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           ++   + A SG+  +  ++ ++S N+AN    G        +         ++  G  + 
Sbjct: 1   MVRGIYTAASGMMAERHKLDVVSNNLANIDLIGYKKDLSIQKAFPEMLIRRLNDDGLYKF 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
            K  ++ +  V +   G        + +   +       D+  T++ +      I+ S 
Sbjct: 61  PKGHLETAPIVGKLGTGVEENEIYTLFEQGPLKTTSNPLDLALTDQGF----FVIQTSD 115


>gi|91204389|emb|CAJ70889.1| similar to flagellar hook protein [Candidatus Kuenenia
           stuttgartiensis]
          Length = 532

 Score = 57.6 bits (137), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 14/100 (14%), Positives = 35/100 (35%)

Query: 34  TTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
           + G +      +  T    + +  SG    ++              G      +G ++  
Sbjct: 433 SNGTSSKIAQLQLATFGNVQGLRRSGDNLYEQTDSSGEPLYTTGGTGSAGDIYNGYLEAS 492

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           NV++  E   +    R +  N + I  + +++   ++L R
Sbjct: 493 NVDMTSELTSLIMAQRGFQLNSRVISTADEVLAEAVNLKR 532


>gi|42524754|ref|NP_970134.1| hypothetical protein Bd3395 [Bdellovibrio bacteriovorus HD100]
 gi|39576964|emb|CAE78193.1| flgE [Bdellovibrio bacteriovorus HD100]
          Length = 427

 Score = 57.6 bits (137), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 16/105 (15%), Positives = 36/105 (34%)

Query: 29  IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASG 88
           +    + G                E +   G  R+K+     +  V            + 
Sbjct: 323 LTAVYSNGQANDLAQIALAKFENPEALFKVGNNRLKESRDSGTASVGAPGAAGRGKLFAK 382

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++   V++  E  +M +  R + AN +TI  + +++   + L R
Sbjct: 383 SLERSTVDLATEFVNMIQNQRGFQANAKTITTTDELLNEVIQLKR 427



 Score = 43.3 bits (100), Expect = 0.011,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 22/44 (50%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
            +++S +   SG+  Q   + +I +NIANA T G       ++
Sbjct: 1  MGILSSLYTGVSGMTAQGEALGVIGDNIANANTIGFKASRAEFQ 44


>gi|326389474|ref|ZP_08211041.1| fagellar hook-basal body protein [Thermoanaerobacter ethanolicus JW
           200]
 gi|325994479|gb|EGD52904.1| fagellar hook-basal body protein [Thermoanaerobacter ethanolicus JW
           200]
          Length = 417

 Score = 57.6 bits (137), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 31/85 (36%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +   G              +     G   +   G ++  NV++  E ADM  T 
Sbjct: 333 FQNPMGLEKIGNTMFINTVNSGEPMIGAAGTGTRGSINPGTLEMSNVDLSNEFADMIVTQ 392

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R + AN + I  S +++   +++ R
Sbjct: 393 RGFQANAKVITVSDEILQDLVNMKR 417



 Score = 42.6 bits (98), Expect = 0.021,   Method: Composition-based stats.
 Identities = 15/42 (35%), Positives = 21/42 (50%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S + A SGL    ARM +I  NIAN  T G       ++
Sbjct: 1  MLRSMYSAVSGLKAHQARMDVIGNNIANVNTVGYKASRMTFK 42


>gi|304397206|ref|ZP_07379085.1| flagellar basal-body rod protein FlgG [Pantoea sp. aB]
 gi|308186395|ref|YP_003930526.1| Flagellar basal-body rod protein flgG [Pantoea vagans C9-1]
 gi|304355355|gb|EFM19723.1| flagellar basal-body rod protein FlgG [Pantoea sp. aB]
 gi|308056905|gb|ADO09077.1| Flagellar basal-body rod protein flgG [Pantoea vagans C9-1]
          Length = 260

 Score = 57.6 bits (137), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 21/129 (16%), Positives = 37/129 (28%), Gaps = 3/129 (2%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            +     I  +  ++  +R  ++S      +              T   +  +   G   
Sbjct: 135 PVQPGITIPANATSITVSRDGVVS---VTQQGQAQAAQVGQLTLSTFMNDAGLDSVGENL 191

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
            K+     +                G  +  NVNV  E   M +T R Y  N + I  S 
Sbjct: 192 YKETQASGAPTDSTPGQNGAGLLYQGYTETSNVNVAEELVTMIQTQRAYEINSKAISTSD 251

Query: 123 DMMTTTLDL 131
            M+     L
Sbjct: 252 QMLAKLTQL 260



 Score = 43.3 bits (100), Expect = 0.012,   Method: Composition-based stats.
 Identities = 16/93 (17%), Positives = 26/93 (27%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I S  IA +GL  Q   M +I+ N+AN  T G       +                 + 
Sbjct: 1  MIRSLWIAKTGLDAQQMNMDVIANNLANVSTNGFKRSRAVFEDLMYQTMRQPGTQSSEQT 60

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVN 96
                Q            +     + +  N  
Sbjct: 61 TLPSGLQIGTGVRPVTTERLHTQGNLSQTSNSK 93


>gi|259907636|ref|YP_002647992.1| Flagellar basal-body rod protein, FlgG [Erwinia pyrifoliae Ep1/96]
 gi|224963258|emb|CAX54742.1| Flagellar basal-body rod protein, FlgG [Erwinia pyrifoliae Ep1/96]
 gi|283477478|emb|CAY73394.1| Flagellar basal-body rod protein flgG [Erwinia pyrifoliae DSM
           12163]
          Length = 260

 Score = 57.6 bits (137), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 14/83 (16%), Positives = 24/83 (28%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
              +  +   GG    +     +                  ++  NVNV  E   M +  
Sbjct: 178 FINDAGLESLGGNLYVETQASGAPNEATPGMDGAGRLKHQYIETSNVNVAEELVTMIQVQ 237

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y  N + +  S  M+     L
Sbjct: 238 RAYEINSKAVSASDQMLQRLAQL 260



 Score = 42.9 bits (99), Expect = 0.015,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 23/61 (37%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I S  IA +GL  Q   M +IS N+AN  +TG       ++                + 
Sbjct: 1  MIRSLWIAKTGLEAQQTNMDVISNNLANVGSTGFKRQRAVFQDLLYQTMRQPGAQASEQT 60

Query: 64 K 64
           
Sbjct: 61 T 61


>gi|148980300|ref|ZP_01815987.1| putative flagellar basal-body rod protein [Vibrionales bacterium
           SWAT-3]
 gi|145961319|gb|EDK26629.1| putative flagellar basal-body rod protein [Vibrionales bacterium
           SWAT-3]
          Length = 250

 Score = 57.6 bits (137), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 13/79 (16%), Positives = 24/79 (30%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                  +   GG    +                      G ++  NV V+ E  DM  T
Sbjct: 166 KFMNPAGLSAQGGNLFVETEGSGEAVELVAGTEGSGQLKQGALEGSNVQVVEEMVDMIAT 225

Query: 108 NRLYMANLQTIKQSHDMMT 126
            R Y  + + +  + +M+ 
Sbjct: 226 QRAYEMSAKMVSAADEMLQ 244


>gi|296531742|ref|ZP_06894567.1| flagellar hook protein FlgE [Roseomonas cervicalis ATCC 49957]
 gi|296267925|gb|EFH13727.1| flagellar hook protein FlgE [Roseomonas cervicalis ATCC 49957]
          Length = 506

 Score = 57.6 bits (137), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 40/111 (36%), Gaps = 2/111 (1%)

Query: 25  ISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVA 84
           ++++     T  +      Y  K   F      +            +  V   DPG   A
Sbjct: 396 VADDGQVIATFSNGKSRPIYALKLAVFPNANGLNPVSGDAYEMSLAAGAVRLIDPGTGAA 455

Query: 85  NASG--IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             +    ++  NV++  E  ++ ET R Y +N   ++ +  M+    +L R
Sbjct: 456 GTTNGGALESSNVDIGTELTNLIETQRAYSSNATVVRTADQMLEEATNLKR 506



 Score = 39.9 bits (91), Expect = 0.13,   Method: Composition-based stats.
 Identities = 17/100 (17%), Positives = 32/100 (32%), Gaps = 3/100 (3%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           I +   + SGL  Q+ ++  IS NIAN+ T G       +    +        +      
Sbjct: 4   INALRTSTSGLNAQAVKLSGISNNIANSSTVGYKRVDTQFESLVLEGSSSGSYA---LAG 60

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
               ++    +         +    V      V+ E +D 
Sbjct: 61  VTPRNRVEISKVGQVQRTGVDTDIAVSGNGFLVVNENSDS 100


>gi|253574271|ref|ZP_04851613.1| flagellar basal body rod protein [Paenibacillus sp. oral taxon 786
           str. D14]
 gi|251846748|gb|EES74754.1| flagellar basal body rod protein [Paenibacillus sp. oral taxon 786
           str. D14]
          Length = 300

 Score = 57.6 bits (137), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 18/110 (16%), Positives = 39/110 (35%), Gaps = 3/110 (2%)

Query: 26  SENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVAN 85
           + N+     TG            +     +    G  V ++  +++  V E  PG   A 
Sbjct: 190 AGNLTAVDNTGALVDLGTLGITVVEQPYQLVRE-GNGVFRVADEEAAGVRELVPGTDGAV 248

Query: 86  -ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD-LLR 133
              G ++  NV+      D+    R Y +N + I+     +   ++ + +
Sbjct: 249 VRQGYLEVSNVDTAQSMVDLLAAQRAYESNQKIIQYYDRSLDKAVNEIGK 298



 Score = 45.2 bits (105), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/99 (21%), Positives = 37/99 (37%), Gaps = 1/99 (1%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           ++   + A SG+  +  R   +++NIAN  T G    +   R        +M        
Sbjct: 1   MLRGLYTAASGMIAEQRRHDTVTQNIANLNTPGYKSVNTVARSFPEMLISLMGDKQSGNN 60

Query: 64  KKIGVDQST-FVEEFDPGHPVANASGIVKYPNVNVLVET 101
           K+IG   +  F EE  P     +     K  +  ++ E 
Sbjct: 61  KQIGKLVTGVFAEESLPAFTQGDLKETGKNTDFALISEL 99


>gi|229918635|ref|YP_002887281.1| hypothetical protein EAT1b_2922 [Exiguobacterium sp. AT1b]
 gi|229470064|gb|ACQ71836.1| protein of unknown function DUF1078 domain protein [Exiguobacterium
           sp. AT1b]
          Length = 303

 Score = 57.6 bits (137), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 17/102 (16%), Positives = 34/102 (33%)

Query: 32  ARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVK 91
               G+   +        S    +   G     +     +        G      SG ++
Sbjct: 202 VAANGELRIAGYIVTSNFSNNAGLSKVGANNFVQSQNSGAPQFGVPGAGGRGELVSGALE 261

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             NV++  E  +M    R + AN + I  S +++   ++L R
Sbjct: 262 MSNVDLSEEFTEMIVAQRGFQANTRIITTSDEILQELVNLKR 303



 Score = 34.8 bits (78), Expect = 4.0,   Method: Composition-based stats.
 Identities = 14/88 (15%), Positives = 32/88 (36%), Gaps = 3/88 (3%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR---RKTISFEEVMHGSGG 60
          ++ + +   SGL    +++ ++  NIAN  T G   G   ++    + +      + + G
Sbjct: 1  MLRAMYSGISGLKNFQSKLDVVGNNIANVNTFGYKKGRVTFKDLVSQQVGSASAGNATTG 60

Query: 61 VRVKKIGVDQSTFVEEFDPGHPVANASG 88
              K      T     +  +  A  + 
Sbjct: 61 GVNPKEVGLGGTMATVDNVYNQGAMQNT 88


>gi|332284019|ref|YP_004415930.1| hypothetical protein PT7_0766 [Pusillimonas sp. T7-7]
 gi|330427972|gb|AEC19306.1| hypothetical protein PT7_0766 [Pusillimonas sp. T7-7]
          Length = 412

 Score = 57.6 bits (137), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 27/77 (35%)

Query: 55  MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
           +   GG    +        +               V+  NV++  E  +M    R Y AN
Sbjct: 335 LQPVGGNAWVETSTSGQPILGRPGSNGMARIKGQAVEESNVDMSQELVNMIIAQRTYQAN 394

Query: 115 LQTIKQSHDMMTTTLDL 131
            QTIK    +M T + +
Sbjct: 395 AQTIKTQDQIMQTLISM 411


>gi|118589981|ref|ZP_01547385.1| Flagellar basal-body rod FlgG [Stappia aggregata IAM 12614]
 gi|118437478|gb|EAV44115.1| Flagellar basal-body rod FlgG [Stappia aggregata IAM 12614]
          Length = 262

 Score = 57.6 bits (137), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 28/79 (35%)

Query: 55  MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
           +   GG   ++     S                G ++  NV+ + E   +    R Y  N
Sbjct: 184 LEPVGGNLFRETEASGSPVSGVAGDPGFGVIRQGYLESSNVDPVKEITALISAQRGYEMN 243

Query: 115 LQTIKQSHDMMTTTLDLLR 133
            + +K + +M  T  + +R
Sbjct: 244 SKVMKAADEMAGTVTNGIR 262



 Score = 42.9 bits (99), Expect = 0.015,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 21/40 (52%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          + +  IA +G++ Q   +++++ NIAN  TT        +
Sbjct: 1  MKALAIAATGMSAQQMNVEVVANNIANMNTTSFKRSQAEF 40


>gi|83589631|ref|YP_429640.1| hypothetical protein Moth_0779 [Moorella thermoacetica ATCC 39073]
 gi|83572545|gb|ABC19097.1| conserved hypothetical protein [Moorella thermoacetica ATCC 39073]
          Length = 275

 Score = 57.6 bits (137), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 22/105 (20%), Positives = 36/105 (34%), Gaps = 3/105 (2%)

Query: 32  ARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANA---SG 88
             +TG    +        S    +   G    +          E       +AN      
Sbjct: 171 VDSTGAALQAGTISIAKFSNPSGLEKIGQNLYRATTSSGDPGSELTPGQGSLANTTIIPS 230

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NV++  E  DM  T R + AN +TI  S  M+   ++L R
Sbjct: 231 ALEMSNVDLAQEFTDMIITERGFQANARTITTSDQMLQELVNLKR 275



 Score = 38.3 bits (87), Expect = 0.33,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 21/42 (50%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S +   SGL     RM +I +NIAN  T G    +  ++
Sbjct: 1  MMRSLYSGVSGLRTHQTRMDVIGDNIANVNTVGFKRSAVTFK 42


>gi|15595120|ref|NP_212909.1| flagellar hook-basal body complex protein (flhO) [Borrelia
           burgdorferi B31]
 gi|2688723|gb|AAC67131.1| flagellar hook-basal body complex protein (flhO) [Borrelia
           burgdorferi B31]
          Length = 300

 Score = 57.6 bits (137), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 16/94 (17%), Positives = 35/94 (37%), Gaps = 12/94 (12%)

Query: 41  SDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVE 100
            +P   K       +      + ++I +     +            +  ++  NVN + E
Sbjct: 217 ENPRFLKKQGNSLWIDTKTSGKAQEIDISLRPKI-----------ETETLEASNVNAVKE 265

Query: 101 TADMRETNRLYMANLQTIKQSHDMMTTTLD-LLR 133
              M E NR Y AN +TI+    ++   ++ + +
Sbjct: 266 MVLMIEINRAYEANQKTIQTEDSLLGKLINEIGK 299



 Score = 43.3 bits (100), Expect = 0.012,   Method: Composition-based stats.
 Identities = 11/70 (15%), Positives = 26/70 (37%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          +   + A SG+  +  ++  +S N+AN    G        +         ++  G  +  
Sbjct: 20 VRGIYTAASGMMAERRKLDTVSNNLANIDLIGYKKDLSIQKAFPEMLIRRLNDDGLYKFP 79

Query: 65 KIGVDQSTFV 74
          K  ++ +  V
Sbjct: 80 KGHLETAPVV 89


>gi|15639945|ref|NP_219398.1| flagellar basal-body rod protein (flgG-2) [Treponema pallidum
           subsp. pallidum str. Nichols]
 gi|189026184|ref|YP_001933956.1| flagellar basal-body rod protein [Treponema pallidum subsp.
           pallidum SS14]
 gi|3323282|gb|AAC65916.1| flagellar basal-body rod protein (flgG-2) [Treponema pallidum
           subsp. pallidum str. Nichols]
 gi|189018759|gb|ACD71377.1| flagellar basal-body rod protein [Treponema pallidum subsp.
           pallidum SS14]
 gi|291060316|gb|ADD73051.1| flagellar basal-body rod protein [Treponema pallidum subsp.
           pallidum str. Chicago]
          Length = 271

 Score = 57.6 bits (137), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 28/114 (24%), Positives = 40/114 (35%), Gaps = 5/114 (4%)

Query: 19  SARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQST----FV 74
             R   I++N        D P  D +    +      +     +       Q+      +
Sbjct: 151 QERYYTINQNGEIYVRPIDRPDVDGFFLDRLKIVTFENVRYLQKKGADTYMQTPVSGAPI 210

Query: 75  EEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
               P  P A   G V+  NVNV+ E   M E NR Y AN +TI+    MM   
Sbjct: 211 AAEGPERPAA-VQGFVEASNVNVVNEMVRMIEVNRAYEANQKTIQAEDGMMGRL 263



 Score = 47.9 bits (112), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 19/96 (19%), Positives = 36/96 (37%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I   + A SG++ Q  R+  I++N+AN  TT        ++         ++  G V+ 
Sbjct: 1  MIRGWYTAASGMSAQQRRLDAIAQNLANVDTTSYKRDVAVHKSFPELLLRRVNDDGVVKN 60

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
               D S  V +   G  V       +  ++    
Sbjct: 61 PFGSSDVSPIVGKLGLGVEVNELFTEFEQGSLKQTQ 96


>gi|292489131|ref|YP_003532018.1| flagellar basal-body rod protein FlgG [Erwinia amylovora CFBP1430]
 gi|292900250|ref|YP_003539619.1| flagellar basal-body rod protein [Erwinia amylovora ATCC 49946]
 gi|291200098|emb|CBJ47224.1| flagellar basal-body rod protein [Erwinia amylovora ATCC 49946]
 gi|291554565|emb|CBA22177.1| Flagellar basal-body rod protein flgG [Erwinia amylovora CFBP1430]
 gi|312173289|emb|CBX81544.1| Flagellar basal-body rod protein flgG [Erwinia amylovora ATCC
           BAA-2158]
          Length = 260

 Score = 57.6 bits (137), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 14/83 (16%), Positives = 24/83 (28%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
              +  +   GG    +     +                  ++  NVNV  E   M +  
Sbjct: 178 FINDAGLESLGGNLYAETQASGAPNEATPGMDGAGRLKHQYIETSNVNVAEELVTMIQVQ 237

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y  N + +  S  M+     L
Sbjct: 238 RAYEINSKAVSASDQMLQRLAQL 260



 Score = 42.6 bits (98), Expect = 0.017,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 23/61 (37%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I S  IA +GL  Q   M +IS N+AN  +TG       ++                + 
Sbjct: 1  MIRSLWIAKTGLEAQQTNMDVISNNLANVGSTGFKRQRAVFQDLLYQTMRQPGAQASEQT 60

Query: 64 K 64
           
Sbjct: 61 T 61


>gi|86154000|ref|ZP_01072202.1| flagellar hook protein FlgE [Campylobacter jejuni subsp. jejuni
           HB93-13]
 gi|85842538|gb|EAQ59751.1| flagellar hook protein FlgE [Campylobacter jejuni subsp. jejuni
           HB93-13]
          Length = 845

 Score = 57.6 bits (137), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 23/106 (21%), Positives = 39/106 (36%)

Query: 28  NIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANAS 87
           NI    T G T         +++    +   GG   K      +  V E   G      +
Sbjct: 740 NILGEFTNGKTFAVAKIAMASVANNSGLEEIGGNLFKVTANSGNIVVGEAGTGGRGEMKT 799

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             ++  NV++     ++    R Y AN +TI  S  M+ T + L +
Sbjct: 800 SALEMSNVDLSRSLTELIIIQRGYQANSKTISTSDQMLQTLIQLKQ 845



 Score = 34.8 bits (78), Expect = 4.4,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 25/72 (34%), Gaps = 4/72 (5%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR----RKTISFEEVMHGSG 59
          ++ S     SGL      M +   NI+N  TTG       +     +          G G
Sbjct: 1  MMRSLWSGVSGLQAHQVAMDVEGNNISNVNTTGFKYSRADFGTMFSQTVKIATAPTDGRG 60

Query: 60 GVRVKKIGVDQS 71
          G    +IG+  S
Sbjct: 61 GSNPLQIGLGVS 72


>gi|254473318|ref|ZP_05086715.1| flagellar basal-body rod protein FlgG [Pseudovibrio sp. JE062]
 gi|211957434|gb|EEA92637.1| flagellar basal-body rod protein FlgG [Pseudovibrio sp. JE062]
          Length = 262

 Score = 57.6 bits (137), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 27/79 (34%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
              +  +   GG   ++     +        G       G ++  NV+ + E   +    
Sbjct: 178 FVNDAGLRAIGGNLFRETEASGAPNTGIAGEGPLGVIRQGYLEGANVDPVKEITSLISAQ 237

Query: 109 RLYMANLQTIKQSHDMMTT 127
           R Y  N + I+ + DM  T
Sbjct: 238 RGYEMNSKVIQAADDMAGT 256



 Score = 44.5 bits (103), Expect = 0.004,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 24/64 (37%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          + +  IA +G++ Q   +++IS NIAN  TT        +       +     S      
Sbjct: 1  MKALAIAATGMSAQQKNLEVISNNIANMNTTAFKASRAEFSDLLYQMDRAAGVSNRGGAA 60

Query: 65 KIGV 68
           +  
Sbjct: 61 PVPE 64


>gi|222824019|ref|YP_002575593.1| flagellar distal rod protein FlgG [Campylobacter lari RM2100]
 gi|222539241|gb|ACM64342.1| flagellar distal rod protein FlgG [Campylobacter lari RM2100]
          Length = 264

 Score = 57.6 bits (137), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 27/85 (31%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +H  G   + +     +                G V+  NV ++ E  D+    
Sbjct: 180 FINPAGLHALGDNLLVETDASGAPIAGIAGENGFSPIKHGFVELSNVQLVEEMTDLITGQ 239

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R Y A  + I  S DM+     L R
Sbjct: 240 RAYEAGSKAITTSDDMLGIVNQLKR 264



 Score = 37.9 bits (86), Expect = 0.52,   Method: Composition-based stats.
 Identities = 13/61 (21%), Positives = 23/61 (37%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ S + A SG+  Q  ++ + S NI+N  T G       +        +    S     
Sbjct: 1  MLRSLYTAASGMVSQQTQIDVTSNNISNVNTVGYKKSRAEFADLMYQTMKYAGTSTSSTT 60

Query: 64 K 64
          K
Sbjct: 61 K 61


>gi|325289233|ref|YP_004265414.1| fagellar hook-basal body protein [Syntrophobotulus glycolicus DSM
           8271]
 gi|324964634|gb|ADY55413.1| fagellar hook-basal body protein [Syntrophobotulus glycolicus DSM
           8271]
          Length = 447

 Score = 57.6 bits (137), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 16/50 (32%), Positives = 29/50 (58%)

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           A +SG ++  NV++  E + M  T R Y AN + I  + +M+ T +++ R
Sbjct: 398 ALSSGTLEMSNVDLSTEFSQMITTQRGYQANSRMITTADEMLETIIEMKR 447



 Score = 39.9 bits (91), Expect = 0.13,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 17/41 (41%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          ++ +   A SGL     +M +I  NIAN  T         +
Sbjct: 1  MMRALFSAVSGLQAHQKKMDVIGNNIANVNTVAYKASRVTF 41


>gi|182412222|ref|YP_001817288.1| hypothetical protein Oter_0398 [Opitutus terrae PB90-1]
 gi|177839436|gb|ACB73688.1| protein of unknown function DUF1078 [Opitutus terrae PB90-1]
          Length = 249

 Score = 57.6 bits (137), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 20/98 (20%), Positives = 33/98 (33%), Gaps = 2/98 (2%)

Query: 37  DTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANA--SGIVKYPN 94
           +T GS       ++   V   +   ++  +            P          G ++  N
Sbjct: 151 NTDGSIFQGETPVANMSVQRFADNAQLIPMPNGYFVPAAGMAPEAVTQPELLQGYLENSN 210

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           V  L E  D+   +R Y AN + I      M   LD+L
Sbjct: 211 VTPLREMVDLVIISRAYEANQRMITTLDQQMQKALDML 248


>gi|294675564|ref|YP_003576179.1| flagellar hook protein FlgE [Rhodobacter capsulatus SB 1003]
 gi|294474384|gb|ADE83772.1| flagellar hook protein FlgE [Rhodobacter capsulatus SB 1003]
          Length = 452

 Score = 57.6 bits (137), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 23/43 (53%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +   V+V  E  ++ +T R Y +N + I+   +M+  T ++ R
Sbjct: 410 EGSAVDVAQELTNLIQTQRAYSSNAKVIQTVDEMLQETTNIKR 452



 Score = 37.5 bits (85), Expect = 0.58,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 27/64 (42%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            + +S +   +GLA  + R+  IS+NIAN+ T G    +  +    ++           
Sbjct: 1  MSISSSLNAGVAGLAANATRLATISDNIANSGTYGYKRATADFESMVLTQARSSGTYSAG 60

Query: 62 RVKK 65
           V+ 
Sbjct: 61 GVRA 64


>gi|257095359|ref|YP_003169000.1| hypothetical protein CAP2UW1_3821 [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257047883|gb|ACV37071.1| protein of unknown function DUF1078 domain protein [Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1]
          Length = 417

 Score = 57.6 bits (137), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 18/61 (29%), Positives = 26/61 (42%)

Query: 71  STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
              V     G      S  ++  NV++  E  DM    R Y AN QTIK    ++ T ++
Sbjct: 356 PELVAAPGSGSRGVIQSSAIEDSNVDLTKELVDMITAQRNYQANAQTIKTQDQVLQTLVN 415

Query: 131 L 131
           L
Sbjct: 416 L 416



 Score = 34.5 bits (77), Expect = 5.7,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 18/39 (46%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          S     SGL+  +  + +I  N+ANA T G    +  + 
Sbjct: 2  SFQQGLSGLSAAATALNVIGNNVANASTVGFKGANAHFA 40


>gi|190890363|ref|YP_001976905.1| flagellar basal-body rod protein [Rhizobium etli CIAT 652]
 gi|218516082|ref|ZP_03512922.1| flagellar basal body rod protein FlgG [Rhizobium etli 8C-3]
 gi|190695642|gb|ACE89727.1| flagellar basal-body rod protein [Rhizobium etli CIAT 652]
          Length = 262

 Score = 57.6 bits (137), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 26/78 (33%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
              E  +   G    ++        V   D         G ++  NV+ + E  ++    
Sbjct: 178 FVNEAGLQPIGDNLFQETAASGEAVVGNPDEEGFAYMKQGYLESSNVDPVKEITELISAQ 237

Query: 109 RLYMANLQTIKQSHDMMT 126
           R Y  N + I  + +M +
Sbjct: 238 RAYEMNSKVITTADEMAS 255



 Score = 44.5 bits (103), Expect = 0.005,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 21/40 (52%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          + +  IA +G+  Q   +++I+ NIAN  TTG       +
Sbjct: 1  MRALAIAATGMDAQQTNLEVIANNIANINTTGFKRARAEF 40


>gi|327398496|ref|YP_004339365.1| flagellar hook-basal body protein [Hippea maritima DSM 10411]
 gi|327181125|gb|AEA33306.1| flagellar hook-basal body protein [Hippea maritima DSM 10411]
          Length = 589

 Score = 57.6 bits (137), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 18/113 (15%), Positives = 38/113 (33%), Gaps = 7/113 (6%)

Query: 28  NIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQST-------FVEEFDPG 80
           NI    + G++              + +   G    K      S        F+   + G
Sbjct: 477 NIMGTYSNGNSYSIAKLAISKFMNPQGLKREGKTMFKTTPNADSEDVLSSYGFIGVANEG 536

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
                 S  ++  NV++     ++ E  R + AN + +  +  ++ T + L R
Sbjct: 537 GRGMILSNHLEASNVDLGEAFVNLIEYQRGFEANSKGVTTADQLLQTAIQLKR 589



 Score = 33.7 bits (75), Expect = 8.8,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 20/42 (47%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          +I + + +++GL  Q   +  I+ NIAN  T G       + 
Sbjct: 1  MIRALYTSSNGLFEQQLGVDSITNNIANVNTIGYKKTRPTFA 42


>gi|89092138|ref|ZP_01165093.1| flagellar basal-body rod protein FlgG [Oceanospirillum sp. MED92]
 gi|89083873|gb|EAR63090.1| flagellar basal-body rod protein FlgG [Oceanospirillum sp. MED92]
          Length = 261

 Score = 57.6 bits (137), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 15/82 (18%), Positives = 30/82 (36%)

Query: 45  RRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
           +       + +   G    ++ G   +  +             G ++  NVN + E  DM
Sbjct: 174 QMADFVNPQGLQSLGQNLYQETGASGAPIISNPGENGTGILVQGALEGSNVNSVQELVDM 233

Query: 105 RETNRLYMANLQTIKQSHDMMT 126
             T R Y  N + I  + +M++
Sbjct: 234 ITTQRAYEMNSKVISTADEMLS 255



 Score = 40.6 bits (93), Expect = 0.080,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 22/41 (53%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  + ++A +G+  Q   +++IS N+AN  T G    +  +
Sbjct: 1  MHGALNVAKTGMTAQDTNLKVISNNLANVSTVGFKKDAVVF 41


>gi|254462557|ref|ZP_05075973.1| flagellar hook protein FlgE [Rhodobacterales bacterium HTCC2083]
 gi|206679146|gb|EDZ43633.1| flagellar hook protein FlgE [Rhodobacteraceae bacterium HTCC2083]
          Length = 1399

 Score = 57.6 bits (137), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 19/133 (14%), Positives = 43/133 (32%), Gaps = 25/133 (18%)

Query: 5    IASAHIANSGL------AVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
            +   +I  +GL        Q+  +  I   +AN                       +   
Sbjct: 1284 LDGLNIDATGLLRANYTNGQNKPLGKIV--LANFNNQNG-----------------LKQV 1324

Query: 59   GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
            G     +        + E       +  SG ++  NV++  E  ++    R + A+ + I
Sbjct: 1325 GNATFVETATSGEPLIGEAGTEGFGSIQSGALERSNVDITEELVNLITAQRNFQASSKAI 1384

Query: 119  KQSHDMMTTTLDL 131
            + S  +  T +++
Sbjct: 1385 ETSTQLTQTIINI 1397


>gi|197120123|ref|YP_002140550.1| flagellar basal body rod protein FlgG [Geobacter bemidjiensis Bem]
 gi|197089483|gb|ACH40754.1| flagellar basal body rod protein FlgG [Geobacter bemidjiensis Bem]
          Length = 262

 Score = 57.6 bits (137), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 15/85 (17%), Positives = 27/85 (31%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            S    ++  G           +                G ++  NV+++ E   M    
Sbjct: 178 FSNPAGLNAIGKNLFLPTDSSGAATTGTAGQNGLGTIEQGFLENSNVSIMEEMVSMIVGQ 237

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R Y  N + I+ S +M+     L R
Sbjct: 238 RAYEINSKAIQASDEMLQQAAGLKR 262



 Score = 42.9 bits (99), Expect = 0.013,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 22/42 (52%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          +I +   A SG+  Q   + +++ N+ANA TTG       ++
Sbjct: 1  MIRALWTAASGMQAQQLNIDVVANNLANAATTGFKKSRADFQ 42


>gi|111115607|ref|YP_710225.1| flagellar hook-basal body complex protein [Borrelia afzelii PKo]
 gi|216263707|ref|ZP_03435702.1| flagellar hook-basal body complex protein [Borrelia afzelii ACA-1]
 gi|110890881|gb|ABH02049.1| flagellar hook-basal body complex protein [Borrelia afzelii PKo]
 gi|215980551|gb|EEC21372.1| flagellar hook-basal body complex protein [Borrelia afzelii ACA-1]
          Length = 282

 Score = 57.6 bits (137), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 30/69 (43%), Gaps = 1/69 (1%)

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           I    S   +E D        +  ++  NVN + E   M E NR Y AN +TI+    ++
Sbjct: 213 IDTKTSGKAQEIDVSLRPKIETEALEASNVNAVKEMVLMIEINRAYEANQKTIQTEDSLL 272

Query: 126 TTTLD-LLR 133
              ++ + +
Sbjct: 273 GKLINEIGK 281



 Score = 45.2 bits (105), Expect = 0.003,   Method: Composition-based stats.
 Identities = 11/71 (15%), Positives = 28/71 (39%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++   + A SG+  +  ++ ++S N+AN    G        +         ++  G  + 
Sbjct: 1  MVRGIYTAASGMMAERRKLDVVSNNLANIDLIGYKKDLSIQKAFPEMLIRRLNDDGLYKF 60

Query: 64 KKIGVDQSTFV 74
           K  ++ +  V
Sbjct: 61 PKGHLETAPIV 71


>gi|307264876|ref|ZP_07546438.1| fagellar hook-basal body protein [Thermoanaerobacter wiegelii
           Rt8.B1]
 gi|306920134|gb|EFN50346.1| fagellar hook-basal body protein [Thermoanaerobacter wiegelii
           Rt8.B1]
          Length = 417

 Score = 57.2 bits (136), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 31/85 (36%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +   G              +     G   +   G ++  NV++  E ADM  T 
Sbjct: 333 FQNPMGLEKIGNTMFINTVNSGEPMIGAAGTGTRGSINPGTLEMSNVDLSNEFADMIVTQ 392

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R + AN + I  S +++   +++ R
Sbjct: 393 RGFQANAKVITVSDEILQDLVNMKR 417



 Score = 42.2 bits (97), Expect = 0.024,   Method: Composition-based stats.
 Identities = 15/42 (35%), Positives = 21/42 (50%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S + A SGL    ARM +I  NIAN  T G       ++
Sbjct: 1  MLRSMYSAVSGLKAHQARMDVIGNNIANVNTVGYKASRMTFK 42


>gi|89902477|ref|YP_524948.1| hypothetical protein Rfer_3717 [Rhodoferax ferrireducens T118]
 gi|89347214|gb|ABD71417.1| protein of unknown function DUF1078-like [Rhodoferax ferrireducens
           T118]
          Length = 404

 Score = 57.2 bits (136), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 21/83 (25%), Positives = 33/83 (39%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
               + +   GG             +     G   A  SG ++  NV++  E  +M    
Sbjct: 321 FRNVQGLSPIGGNSWVASYTSGDPVLGSPGVGKFGALRSGALEESNVDLTAELVNMMTAQ 380

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y AN QTIK    +M+T ++L
Sbjct: 381 RAYQANAQTIKTQDQVMSTLVNL 403



 Score = 37.9 bits (86), Expect = 0.49,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 23/67 (34%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          S     SGL   S  + +I  NIANA TTG       +     S       SG      +
Sbjct: 2  SFQTGLSGLNASSRSLDVIGNNIANANTTGMKSSRAEFGDLVASSLGAGGSSGAGIGVAV 61

Query: 67 GVDQSTF 73
          G     F
Sbjct: 62 GSISQQF 68


>gi|22127325|ref|NP_670748.1| flagellar basal body rod protein FlgG [Yersinia pestis KIM 10]
 gi|45442798|ref|NP_994337.1| flagellar basal body rod protein FlgG [Yersinia pestis biovar
           Microtus str. 91001]
 gi|51597635|ref|YP_071826.1| flagellar basal body rod protein FlgG [Yersinia pseudotuberculosis
           IP 32953]
 gi|108809053|ref|YP_652969.1| flagellar basal body rod protein FlgG [Yersinia pestis Antiqua]
 gi|108810750|ref|YP_646517.1| flagellar basal body rod protein FlgG [Yersinia pestis Nepal516]
 gi|145597819|ref|YP_001161895.1| flagellar basal body rod protein FlgG [Yersinia pestis Pestoides F]
 gi|150260247|ref|ZP_01916975.1| lateral flagellar basal body rod protein [Yersinia pestis
           CA88-4125]
 gi|153947407|ref|YP_001399636.1| flagellar basal body rod protein FlgG [Yersinia pseudotuberculosis
           IP 31758]
 gi|162421910|ref|YP_001604845.1| flagellar basal body rod protein FlgG [Yersinia pestis Angola]
 gi|165925150|ref|ZP_02220982.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165939077|ref|ZP_02227629.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|166008679|ref|ZP_02229577.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166212222|ref|ZP_02238257.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|167399088|ref|ZP_02304612.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167419078|ref|ZP_02310831.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167425222|ref|ZP_02316975.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|167466335|ref|ZP_02331039.1| flagellar basal-body rod protein FlgG [Yersinia pestis FV-1]
 gi|186896769|ref|YP_001873881.1| flagellar basal body rod protein FlgG [Yersinia pseudotuberculosis
           PB1/+]
 gi|218927914|ref|YP_002345789.1| flagellar basal body rod protein FlgG [Yersinia pestis CO92]
 gi|229837410|ref|ZP_04457573.1| Flagellar basal-body rod protein flgG [Yersinia pestis Pestoides A]
 gi|229840625|ref|ZP_04460784.1| Flagellar basal-body rod protein flgG [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229842824|ref|ZP_04462976.1| Flagellar basal-body rod protein flgG [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229900947|ref|ZP_04516071.1| Flagellar basal-body rod protein flgG [Yersinia pestis Nepal516]
 gi|270487670|ref|ZP_06204744.1| flagellar basal-body rod protein FlgG [Yersinia pestis KIM D27]
 gi|294502791|ref|YP_003566853.1| putative flagellar basal-body rod protein [Yersinia pestis Z176003]
 gi|21960406|gb|AAM86999.1|AE013948_7 flagellar biosynthesis protein, cell-distal portion of basal-body
           rod [Yersinia pestis KIM 10]
 gi|45437664|gb|AAS63214.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
           Microtus str. 91001]
 gi|51590917|emb|CAH22573.1| putative flagellar basal-body rod protein [Yersinia
           pseudotuberculosis IP 32953]
 gi|108774398|gb|ABG16917.1| flagellar basal-body rod protein [Yersinia pestis Nepal516]
 gi|108780966|gb|ABG15024.1| putative flagellar basal-body rod protein [Yersinia pestis Antiqua]
 gi|115346525|emb|CAL19402.1| putative flagellar basal-body rod protein [Yersinia pestis CO92]
 gi|145209515|gb|ABP38922.1| flagellar basal-body rod protein [Yersinia pestis Pestoides F]
 gi|149289655|gb|EDM39732.1| lateral flagellar basal body rod protein [Yersinia pestis
           CA88-4125]
 gi|152958902|gb|ABS46363.1| flagellar basal-body rod protein FlgG [Yersinia pseudotuberculosis
           IP 31758]
 gi|162354725|gb|ABX88673.1| flagellar basal-body rod protein FlgG [Yersinia pestis Angola]
 gi|165913033|gb|EDR31658.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|165923350|gb|EDR40501.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165992018|gb|EDR44319.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166206968|gb|EDR51448.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|166963072|gb|EDR59093.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167051592|gb|EDR63000.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167055985|gb|EDR65766.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|186699795|gb|ACC90424.1| flagellar basal-body rod protein FlgG [Yersinia pseudotuberculosis
           PB1/+]
 gi|229682286|gb|EEO78378.1| Flagellar basal-body rod protein flgG [Yersinia pestis Nepal516]
 gi|229690091|gb|EEO82148.1| Flagellar basal-body rod protein flgG [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229696991|gb|EEO87038.1| Flagellar basal-body rod protein flgG [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229705533|gb|EEO91543.1| Flagellar basal-body rod protein flgG [Yersinia pestis Pestoides A]
 gi|262360823|gb|ACY57544.1| putative flagellar basal-body rod protein [Yersinia pestis D106004]
 gi|262364768|gb|ACY61325.1| putative flagellar basal-body rod protein [Yersinia pestis D182038]
 gi|270336174|gb|EFA46951.1| flagellar basal-body rod protein FlgG [Yersinia pestis KIM D27]
 gi|294353250|gb|ADE63591.1| putative flagellar basal-body rod protein [Yersinia pestis Z176003]
 gi|320016709|gb|ADW00281.1| Flagellar basal-body rod protein flgG [Yersinia pestis biovar
           Medievalis str. Harbin 35]
          Length = 261

 Score = 57.2 bits (136), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 24/77 (31%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +   GG   ++                      G ++  NV V+ E  DM    
Sbjct: 178 FINPAGLEAIGGNLYRETAASGEAVEGVPGEEAFGQLEQGALEGSNVQVVEEMVDMITVQ 237

Query: 109 RLYMANLQTIKQSHDMM 125
           R Y  N + +  + DM+
Sbjct: 238 RAYEMNAKMVSAADDML 254



 Score = 41.4 bits (95), Expect = 0.041,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 22/42 (52%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          + ++  ++ +GLA Q A+M  IS N+AN  T G       + 
Sbjct: 1  MNSALWVSKTGLAAQDAKMGAISNNLANVNTDGFKRDRVVFA 42


>gi|157415947|ref|YP_001483203.1| flagellar hook protein FlgE [Campylobacter jejuni subsp. jejuni
           81116]
 gi|157386911|gb|ABV53226.1| hypothetical protein C8J_1629 [Campylobacter jejuni subsp. jejuni
           81116]
          Length = 852

 Score = 57.2 bits (136), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 23/106 (21%), Positives = 39/106 (36%)

Query: 28  NIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANAS 87
           NI    T G T         +++    +   GG   K      +  V E   G      +
Sbjct: 747 NILGEFTNGKTFAVAKIAMASVANNSGLEEIGGNLFKVTANSGNIVVGEAGTGGRGEMKT 806

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             ++  NV++     ++    R Y AN +TI  S  M+ T + L +
Sbjct: 807 SALEMSNVDLSRSLTELIIIQRGYQANSKTISTSDQMLQTLIQLKQ 852



 Score = 34.5 bits (77), Expect = 4.6,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 25/72 (34%), Gaps = 4/72 (5%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR----RKTISFEEVMHGSG 59
          ++ S     SGL      M +   NI+N  TTG       +     +          G G
Sbjct: 1  MMRSLWSGVSGLQAHQVAMDVEGNNISNVNTTGFKYSRADFGTMFSQTVKIATAPTDGRG 60

Query: 60 GVRVKKIGVDQS 71
          G    +IG+  S
Sbjct: 61 GSNPLQIGLGVS 72


>gi|187926954|ref|YP_001893299.1| flagellar basal body FlaE domain protein [Ralstonia pickettii 12J]
 gi|241665283|ref|YP_002983642.1| flagellar hook protein FlgE [Ralstonia pickettii 12D]
 gi|187728708|gb|ACD29872.1| flagellar basal body FlaE domain protein [Ralstonia pickettii 12J]
 gi|240867310|gb|ACS64970.1| protein of unknown function DUF1078 domain protein [Ralstonia
           pickettii 12D]
          Length = 402

 Score = 57.2 bits (136), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 32/83 (38%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
               E +   GG +  +     +  +     G      S  V+  NV++  E  +M    
Sbjct: 320 FKAPEGLQNIGGNQWVETSNSGAPNLGTPGMGSFGLLQSSAVEQSNVDLSQELVNMIIAQ 379

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y AN QTIK    ++ T + +
Sbjct: 380 RSYQANAQTIKTQDTILQTLVTM 402



 Score = 37.2 bits (84), Expect = 0.75,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 34/113 (30%), Gaps = 14/113 (12%)

Query: 7   SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY---RRKTISFEEVMHGSGGVRV 63
                 SGL   S  + +I  N+ANA T G    +  +     +++          GV V
Sbjct: 2   GFQQGLSGLDAASKNLDVIGSNVANANTVGYKKSTAEFGDVYARSLVGASDNQVGQGVEV 61

Query: 64  KKIGVD--QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
            ++     Q       +P     N +G  +           D       Y  N
Sbjct: 62  TRVSQSFTQGNVTITGNPLDIAINGTGFYR---------MVDTASGQVSYSRN 105


>gi|116626495|ref|YP_828651.1| hypothetical protein Acid_7458 [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116229657|gb|ABJ88366.1| protein of unknown function DUF1078 domain protein [Candidatus
           Solibacter usitatus Ellin6076]
          Length = 421

 Score = 57.2 bits (136), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 14/89 (15%), Positives = 32/89 (35%)

Query: 45  RRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
              ++   E +   G    +      +  +   + G       G ++   V++  E  ++
Sbjct: 333 AMASVRNPESLIAVGNNNYQASARTATPAIGLPNTGGRGDIVGGAIEASTVDIAKEFTNL 392

Query: 105 RETNRLYMANLQTIKQSHDMMTTTLDLLR 133
               R Y AN + I    ++   T++L R
Sbjct: 393 IVLQRGYQANSRVITTVDELSQETINLKR 421



 Score = 40.6 bits (93), Expect = 0.076,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 18/42 (42%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          +  S   A S L+  +  + ++  N+AN  T G       +R
Sbjct: 1  MFTSFSTALSALSATATAVDVVGNNLANLNTPGFKTNVVYFR 42


>gi|325923276|ref|ZP_08184949.1| flagellar basal-body rod protein FlgG [Xanthomonas gardneri ATCC
           19865]
 gi|325546203|gb|EGD17384.1| flagellar basal-body rod protein FlgG [Xanthomonas gardneri ATCC
           19865]
          Length = 261

 Score = 57.2 bits (136), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 18/128 (14%), Positives = 31/128 (24%), Gaps = 3/128 (2%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            L     +     ++       IS  +A                        +   G   
Sbjct: 135 PLQPGIQVPEGAQSLTIGNDGTISVTLA---GQAAAQEIGALTLTDFINPSGLQSKGENL 191

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
             +                      G ++  NVN + E   M ET R Y  N + I  + 
Sbjct: 192 FVETTASGPAQNGTPGLNGLGTTVQGALEGSNVNTVEELVSMIETQRAYEMNAKAISTTD 251

Query: 123 DMMTTTLD 130
            M+    +
Sbjct: 252 SMLGYLNN 259



 Score = 44.5 bits (103), Expect = 0.004,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 21/41 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  +  +A +GL  Q  RM +IS N+AN  TTG       +
Sbjct: 1  MNQALWVAKTGLDAQQTRMSVISNNLANTNTTGFKRDRAAF 41


>gi|126444737|ref|YP_001061248.1| flagellar basal body rod protein FlgG [Burkholderia pseudomallei
           668]
 gi|126224228|gb|ABN87733.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei
           668]
          Length = 262

 Score = 57.2 bits (136), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 19/113 (16%), Positives = 30/113 (26%), Gaps = 3/113 (2%)

Query: 24  IISENIANARTTGDTPGSDPYRRKT---ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPG 80
            I EN   A T           +           +   G     +          E    
Sbjct: 150 AIGENGIVAATMPGASSPSEVGQIQLANFVNPAGLLALGDNLYMETVASGPPNEGEPGTD 209

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
                  G ++  NV V+ E  DM    R Y  N + +  + +M+       R
Sbjct: 210 VFGKIKQGALEGSNVQVVEEMVDMIAAQRTYEMNTKVLSAADNMLQQLSQAAR 262



 Score = 39.5 bits (90), Expect = 0.17,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 21/41 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  +  I+ +GL  Q A++Q ++ N+AN  T G       +
Sbjct: 1  MNQAMWISKTGLQAQDAKLQAVANNLANVNTVGFKRDRVVF 41


>gi|315639349|ref|ZP_07894511.1| flagellar hook protein [Campylobacter upsaliensis JV21]
 gi|315480675|gb|EFU71317.1| flagellar hook protein [Campylobacter upsaliensis JV21]
          Length = 839

 Score = 57.2 bits (136), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 23/100 (23%), Positives = 37/100 (37%)

Query: 34  TTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
           T G T         +++    +   GG   K  G   +  V E   G      +  ++  
Sbjct: 740 TNGKTFAVAKIAMASVANNSGLEEIGGNLFKVTGNSGNIVVGEAGTGGRGEMKTSALEMS 799

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           NV++      +    R Y AN +TI  S  M+ T L L +
Sbjct: 800 NVDLSRSLTQLIVVQRGYQANSKTISTSDQMLNTLLQLKQ 839



 Score = 35.2 bits (79), Expect = 3.0,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 16/41 (39%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          ++ S     SG+      M +   NI+N  TTG       +
Sbjct: 1  MMRSLWSGVSGMQAHQIAMDVEGNNISNVNTTGFKYSRADF 41


>gi|302392387|ref|YP_003828207.1| flagellar hook-basal body protein [Acetohalobium arabaticum DSM
           5501]
 gi|302204464|gb|ADL13142.1| flagellar hook-basal body protein [Acetohalobium arabaticum DSM
           5501]
          Length = 557

 Score = 57.2 bits (136), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 20/105 (19%), Positives = 35/105 (33%)

Query: 29  IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASG 88
           I  +   G           T S    +   G              V +   G     A G
Sbjct: 453 ITGSYDNGYNKALAKIGVATFSNPAGLSKEGDTLFDTSNNSGDPQVGQAGIGGRGMIAPG 512

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NV++  +  +M    R + +N + I  S  M+ T ++L R
Sbjct: 513 SLEMSNVDLARQFTEMITAQRGFQSNSKAISTSDQMLQTLVNLKR 557



 Score = 40.2 bits (92), Expect = 0.11,   Method: Composition-based stats.
 Identities = 17/101 (16%), Positives = 35/101 (34%), Gaps = 7/101 (6%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           ++ S +   SGL     +M +I  NI+N  TTG          +    E +     G   
Sbjct: 1   MMRSMYAGVSGLKAHQTKMDVIGNNISNVNTTG------YKGSRVTFKEMLNQTMEGASA 54

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
            + G   +   +        +  + + +  N+    +  D+
Sbjct: 55  PQDGRGGTNPQQIGLGVSLGSIDNNM-ETGNLQSTGKMTDV 94


>gi|283953666|ref|ZP_06371197.1| flagellar hook protein [Campylobacter jejuni subsp. jejuni 414]
 gi|283794707|gb|EFC33445.1| flagellar hook protein [Campylobacter jejuni subsp. jejuni 414]
          Length = 864

 Score = 57.2 bits (136), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 23/106 (21%), Positives = 39/106 (36%)

Query: 28  NIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANAS 87
           NI    T G T         +++    +   GG   K      +  V E   G      +
Sbjct: 759 NILGEFTNGKTFAVAKIAMASVANNSGLEEIGGNLFKVTANSGNIVVGEAGTGGRGEMKT 818

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             ++  NV++     ++    R Y AN +TI  S  M+ T + L +
Sbjct: 819 SALEMSNVDLSRSLTELIIIQRGYQANSKTISTSDQMLQTLIQLKQ 864



 Score = 34.8 bits (78), Expect = 4.1,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 25/72 (34%), Gaps = 4/72 (5%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR----RKTISFEEVMHGSG 59
          ++ S     SGL      M +   NI+N  TTG       +     +          G G
Sbjct: 1  MMRSLWSGVSGLQAHQVAMDVEGNNISNVNTTGFKYSRADFGTMFSQTVKIATAPTDGRG 60

Query: 60 GVRVKKIGVDQS 71
          G    +IG+  S
Sbjct: 61 GQNPLQIGLGVS 72


>gi|254182892|ref|ZP_04889485.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei
           1655]
 gi|254299684|ref|ZP_04967133.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei
           406e]
 gi|157809479|gb|EDO86649.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei
           406e]
 gi|184213426|gb|EDU10469.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei
           1655]
          Length = 262

 Score = 57.2 bits (136), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 19/113 (16%), Positives = 30/113 (26%), Gaps = 3/113 (2%)

Query: 24  IISENIANARTTGDTPGSDPYRRKT---ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPG 80
            I EN   A T           +           +   G     +          E    
Sbjct: 150 AIGENGIVAATMPGASSPSEVGQIQLANFVNPAGLLALGDNLYMETVASGPPNEGEPGTD 209

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
                  G ++  NV V+ E  DM    R Y  N + +  + +M+       R
Sbjct: 210 VFGKIKQGALEGSNVQVVEEMVDMIAAQRTYEMNTKVLSAADNMLQQLSQAAR 262



 Score = 39.5 bits (90), Expect = 0.17,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 21/41 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  +  I+ +GL  Q A++Q ++ N+AN  T G       +
Sbjct: 1  MNQAMWISKTGLQAQDAKLQAVANNLANVNTVGFKRDRVVF 41


>gi|150020363|ref|YP_001305717.1| hypothetical protein Tmel_0465 [Thermosipho melanesiensis BI429]
 gi|149792884|gb|ABR30332.1| protein of unknown function DUF1078 domain protein [Thermosipho
           melanesiensis BI429]
          Length = 233

 Score = 57.2 bits (136), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 20/119 (16%), Positives = 36/119 (30%), Gaps = 6/119 (5%)

Query: 18  QSARMQIISENI-ANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQST---- 72
              RM   + N  AN      TP       K     ++        +     +       
Sbjct: 109 AGKRMYTRAGNFKANEEGYLITPEGYYVLGKNDQKIKLDGNVLEKLLVVALKNPRKVGYT 168

Query: 73  -FVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            F  E           G V+  NVN++ E   M E  R Y    + +    +++  +++
Sbjct: 169 FFKGEEVRKENFRILQGYVEKSNVNIVREMVKMIEATRHYETLSKAVTVHDELLNKSIN 227



 Score = 41.8 bits (96), Expect = 0.029,   Method: Composition-based stats.
 Identities = 18/93 (19%), Positives = 33/93 (35%), Gaps = 3/93 (3%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGS---DPYRRKTISFEEVMHGSGG 60
          +    ++A+ G+     ++  +S NI+N  T G    S     Y  K +     M     
Sbjct: 1  MYRGIYLASMGMLADITKLDTLSNNISNVDTAGYKSDSLAFKAYFEKQLYSFNPMPQKEE 60

Query: 61 VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
          V VKKIG  +   + +    +          + 
Sbjct: 61 VEVKKIGSFEQALILDQVKTNYSQGTLEYTGHS 93


>gi|332140548|ref|YP_004426286.1| flagellar basal body rod protein FlgG [Alteromonas macleodii str.
           'Deep ecotype']
 gi|327550570|gb|AEA97288.1| flagellar basal body rod protein FlgG [Alteromonas macleodii str.
           'Deep ecotype']
          Length = 262

 Score = 57.2 bits (136), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 14/82 (17%), Positives = 27/82 (32%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +  +G     +     +              + G ++  NVNV  E  ++ E+ 
Sbjct: 179 FVNPTGLQPTGQNLFVETASSGAPIQGIPGLQGLGYISQGTLETSNVNVTEELVNLIESQ 238

Query: 109 RLYMANLQTIKQSHDMMTTTLD 130
           RLY  N + I     M+   + 
Sbjct: 239 RLYEMNSKVISSVDQMLGQVIQ 260



 Score = 39.1 bits (89), Expect = 0.21,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 19/41 (46%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  +  I+ +GL      + ++S N+ANA T G       +
Sbjct: 1  MHPALWISKTGLDAAQTDVAVVSNNLANASTVGFKKDRAVF 41


>gi|57506151|ref|ZP_00372072.1| flagellar basal-body rod protein (flgG) [Campylobacter upsaliensis
           RM3195]
 gi|57015546|gb|EAL52339.1| flagellar basal-body rod protein (flgG) [Campylobacter upsaliensis
           RM3195]
          Length = 853

 Score = 57.2 bits (136), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 23/100 (23%), Positives = 37/100 (37%)

Query: 34  TTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
           T G T         +++    +   GG   K  G   +  V E   G      +  ++  
Sbjct: 754 TNGKTFAVAKIAMASVANNSGLEEIGGNLFKVTGNSGNIVVGEAGTGGRGEMKTSALEMS 813

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           NV++      +    R Y AN +TI  S  M+ T L L +
Sbjct: 814 NVDLSRSLTQLIVVQRGYQANSKTISTSDQMLNTLLQLKQ 853



 Score = 34.8 bits (78), Expect = 3.5,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 15/41 (36%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          ++ S     SG+      M +   NI+N  T G       +
Sbjct: 1  MMRSLWSGVSGMQAHQIAMDVEGNNISNVNTAGFKYSRADF 41


>gi|157692308|ref|YP_001486770.1| flagellar basal body rod protein FlgG [Bacillus pumilus SAFR-032]
 gi|157681066|gb|ABV62210.1| flagellar basal body rod protein [Bacillus pumilus SAFR-032]
          Length = 263

 Score = 57.2 bits (136), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 12/60 (20%), Positives = 26/60 (43%)

Query: 74  VEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
                        +G ++  NV++  E  +M    R + +N +TI  S +++   ++L R
Sbjct: 204 PIVPGEQGTGVIQTGKLEMSNVDLTDEFTEMIIAQRGFQSNAKTITTSDEILQELVNLKR 263


>gi|90577346|ref|ZP_01233157.1| putative flagellar basal-body rod protein [Vibrio angustum S14]
 gi|90440432|gb|EAS65612.1| putative flagellar basal-body rod protein [Vibrio angustum S14]
          Length = 261

 Score = 57.2 bits (136), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 26/78 (33%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                  +   GG   K+                  +   G ++  NV V+ E  DM  T
Sbjct: 177 KFINPAGLEAIGGNLYKETQASGQPQEMIAGADGAGSLKQGALEGSNVQVVEEMVDMITT 236

Query: 108 NRLYMANLQTIKQSHDMM 125
            R Y  N + +  + DM+
Sbjct: 237 QRAYEMNAKVVSAADDML 254



 Score = 40.6 bits (93), Expect = 0.070,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 21/41 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          + ++  ++ +G+A Q  +M  IS N+AN  T G       +
Sbjct: 1  MHSALWVSKTGMAAQDTKMTAISNNLANVNTVGFKRDRVVF 41


>gi|2316082|gb|AAC45551.1| hook protein [Campylobacter coli]
          Length = 851

 Score = 57.2 bits (136), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 23/106 (21%), Positives = 39/106 (36%)

Query: 28  NIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANAS 87
           NI    T G T         +++    +   GG   K      +  V E   G      +
Sbjct: 746 NILGEFTNGKTFAVAKIAMASVANNSGLEEIGGNLFKVTANSGNIVVGEAGTGGRGEMKT 805

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             ++  NV++     ++    R Y AN +TI  S  M+ T + L +
Sbjct: 806 AALEMSNVDLSRSLTELIIIQRGYQANSKTISTSDQMLQTLIQLKQ 851



 Score = 34.5 bits (77), Expect = 4.6,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 25/72 (34%), Gaps = 4/72 (5%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR----RKTISFEEVMHGSG 59
          ++ S     SGL      M +   NI+N  TTG       +     +          G G
Sbjct: 1  MMRSLWSGVSGLQAHQVAMDVEGNNISNVNTTGFKYSRADFGTMFSQTVKIATAPTDGRG 60

Query: 60 GVRVKKIGVDQS 71
          G    +IG+  S
Sbjct: 61 GSNPLQIGLGVS 72


>gi|330889080|gb|EGH21741.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv.
           mori str. 301020]
          Length = 100

 Score = 57.2 bits (136), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 13/82 (15%), Positives = 25/82 (30%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +   GG    + G   +  +               ++  NV+ + E  +M  T 
Sbjct: 17  FINPAGLQAIGGNLYLETGSSGAPQIGTPGLNGLGPTLQNTLENSNVSTVEELVNMITTQ 76

Query: 109 RLYMANLQTIKQSHDMMTTTLD 130
           R Y  N + I  +  M+     
Sbjct: 77  RAYEMNSKVISTADQMLQNLTQ 98


>gi|223889387|ref|ZP_03623973.1| flagellar hook-basal body complex protein [Borrelia burgdorferi
           64b]
 gi|223885073|gb|EEF56177.1| flagellar hook-basal body complex protein [Borrelia burgdorferi
           64b]
          Length = 282

 Score = 57.2 bits (136), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 17/94 (18%), Positives = 35/94 (37%), Gaps = 12/94 (12%)

Query: 41  SDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVE 100
            +P   K       +      + ++I +     +E              ++  NVN + E
Sbjct: 199 ENPRFLKKQGNSLWIDTKTSGKAQEIDISLRPKIEIET-----------LEASNVNAVKE 247

Query: 101 TADMRETNRLYMANLQTIKQSHDMMTTTLD-LLR 133
              M E NR Y AN +TI+    ++   ++ + +
Sbjct: 248 MVLMIEINRAYEANQKTIQTEDSLLGKLINEIGK 281



 Score = 45.2 bits (105), Expect = 0.003,   Method: Composition-based stats.
 Identities = 11/71 (15%), Positives = 27/71 (38%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++   + A SG+  +  ++  +S N+AN    G        +         ++  G  + 
Sbjct: 1  MVRGIYTAASGMMAERRKLDTVSNNLANIDLIGYKKDLSIQKAFPEMLIRRLNDDGLYKF 60

Query: 64 KKIGVDQSTFV 74
           K  ++ +  V
Sbjct: 61 PKGHLETAPVV 71


>gi|21242725|ref|NP_642307.1| flagellar basal body rod protein FlgG [Xanthomonas axonopodis pv.
           citri str. 306]
 gi|78047584|ref|YP_363759.1| flagellar basal body rod protein FlgG [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|294624042|ref|ZP_06702805.1| flagellar biosynthesis cell-distal portion of basal-body rod
           [Xanthomonas fuscans subsp. aurantifolii str. ICPB
           11122]
 gi|294665577|ref|ZP_06730858.1| flagellar biosynthesis cell-distal portion of basal-body rod
           [Xanthomonas fuscans subsp. aurantifolii str. ICPB
           10535]
 gi|325927973|ref|ZP_08189194.1| flagellar basal-body rod protein FlgG [Xanthomonas perforans
           91-118]
 gi|21108201|gb|AAM36843.1| flagellar biosynthesis cell-distal portion of basal-body rod
           [Xanthomonas axonopodis pv. citri str. 306]
 gi|78036014|emb|CAJ23705.1| flagella basal body rod protein [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|292601661|gb|EFF45635.1| flagellar biosynthesis cell-distal portion of basal-body rod
           [Xanthomonas fuscans subsp. aurantifolii str. ICPB
           11122]
 gi|292604675|gb|EFF48045.1| flagellar biosynthesis cell-distal portion of basal-body rod
           [Xanthomonas fuscans subsp. aurantifolii str. ICPB
           10535]
 gi|325541658|gb|EGD13179.1| flagellar basal-body rod protein FlgG [Xanthomonas perforans
           91-118]
          Length = 261

 Score = 57.2 bits (136), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 18/128 (14%), Positives = 31/128 (24%), Gaps = 3/128 (2%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            L     +     ++       IS  +A                        +   G   
Sbjct: 135 PLQPGIQVPEGAQSLTIGNDGTISVTLA---GQAAAQEIGALTLTDFINPSGLQAKGENL 191

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
             +                      G ++  NVN + E   M ET R Y  N + I  + 
Sbjct: 192 FVETTASGPAQNGTPGLNGLGTTVQGALEGSNVNTVEELVSMIETQRAYEMNAKAISTTD 251

Query: 123 DMMTTTLD 130
            M+    +
Sbjct: 252 SMLGYLNN 259



 Score = 44.9 bits (104), Expect = 0.004,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 21/41 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  +  +A +GL  Q  RM +IS N+AN  TTG       +
Sbjct: 1  MNQALWVAKTGLDAQQTRMSVISNNLANTNTTGFKRDRAAF 41


>gi|85712256|ref|ZP_01043307.1| Flagella basal body rod protein [Idiomarina baltica OS145]
 gi|85693883|gb|EAQ31830.1| Flagella basal body rod protein [Idiomarina baltica OS145]
          Length = 262

 Score = 57.2 bits (136), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 26/78 (33%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +   G    K+  V  +                G+++  NVNV  E  ++ E  
Sbjct: 179 FINPAGLEPIGQNLYKETAVSGAPQESVPGVDGVGNVRQGMLETSNVNVTEELVNLIEAQ 238

Query: 109 RLYMANLQTIKQSHDMMT 126
           R Y  N + I     M++
Sbjct: 239 RGYEMNSKVISSVDQMLS 256



 Score = 39.5 bits (90), Expect = 0.15,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 28/68 (41%), Gaps = 3/68 (4%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +  +  I+ +GL  Q   + +IS N+ANA T G       +        + ++  GG   
Sbjct: 1  MNPALWISKTGLDAQQRDISVISNNLANASTVGFKKSRAIF---EDLLYQNINQPGGQSA 57

Query: 64 KKIGVDQS 71
          + + +   
Sbjct: 58 QDVELPNG 65


>gi|160901599|ref|YP_001567180.1| hypothetical protein Pmob_0108 [Petrotoga mobilis SJ95]
 gi|160359243|gb|ABX30857.1| protein of unknown function DUF1078 domain protein [Petrotoga
           mobilis SJ95]
          Length = 702

 Score = 57.2 bits (136), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 24/48 (50%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             G ++  NV++  E  +M    R + AN ++I  +  ++   +++ R
Sbjct: 655 NPGALEMSNVDLAEEFTNMIIAQRGFQANSRSITTADAILNELVNIKR 702



 Score = 33.7 bits (75), Expect = 7.9,   Method: Composition-based stats.
 Identities = 10/58 (17%), Positives = 21/58 (36%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
          ++ S +   +GL     ++ I++ NIAN  T G       ++          +     
Sbjct: 1  MLRSMYSGITGLRNFQDQLDIVANNIANVNTVGYKGSRATFQTTLFQTLSAGNAPQNQ 58


>gi|325567523|ref|ZP_08144190.1| flagellar hook-basal body protein [Enterococcus casseliflavus ATCC
           12755]
 gi|325158956|gb|EGC71102.1| flagellar hook-basal body protein [Enterococcus casseliflavus ATCC
           12755]
          Length = 298

 Score = 57.2 bits (136), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 20/86 (23%), Positives = 36/86 (41%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
           T +  E +   GG    +     +  V            +G ++  NV++  E  +M   
Sbjct: 213 TFNNPEGLEKVGGNNYIQTSNSGNAIVAGPGNNGAGTLQAGALEMSNVDLSTEFTEMIIA 272

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
           +R Y AN ++I  S +M+   L+L R
Sbjct: 273 SRAYQANSRSITTSDEMLQELLNLKR 298



 Score = 34.1 bits (76), Expect = 7.5,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 21/56 (37%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          ++ S +   SG+     +M ++S NIAN  T G       ++             G
Sbjct: 1  MLRSLYSGVSGMKNLQTKMDVVSNNIANVNTVGFKSSRVLFQDMMSQTMSNATAPG 56


>gi|302874597|ref|YP_003843230.1| fagellar hook-basal body protein [Clostridium cellulovorans 743B]
 gi|307690792|ref|ZP_07633238.1| fagellar hook-basal body protein [Clostridium cellulovorans 743B]
 gi|302577454|gb|ADL51466.1| fagellar hook-basal body protein [Clostridium cellulovorans 743B]
          Length = 474

 Score = 57.2 bits (136), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 15/82 (18%), Positives = 34/82 (41%)

Query: 52  EEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
             + + S       I     T  +  +     +  +G+V+  NV++  +  +M   +R +
Sbjct: 393 NNLYNVSANSGEPIIRSSVGTEKDRSNEDAFGSCVNGVVEMSNVDLAEQFTEMIVASRAF 452

Query: 112 MANLQTIKQSHDMMTTTLDLLR 133
            AN + I  S +++   + L R
Sbjct: 453 QANSKIITTSDEILQELVQLKR 474


>gi|218135323|ref|ZP_03464127.1| hypothetical protein BACPEC_03228 [Bacteroides pectinophilus ATCC
           43243]
 gi|217990708|gb|EEC56719.1| hypothetical protein BACPEC_03228 [Bacteroides pectinophilus ATCC
           43243]
          Length = 256

 Score = 57.2 bits (136), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 24/47 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NVNV+ E  +M   +R + AN + +  + D +   + L +
Sbjct: 209 QGYLEQSNVNVVSEMVEMITISRAFEANQKAMNAADDTLKKAVTLGQ 255



 Score = 36.8 bits (83), Expect = 1.1,   Method: Composition-based stats.
 Identities = 12/38 (31%), Positives = 20/38 (52%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGS 41
          ++   + A +GL  Q  R+ ++S N+ANA TT      
Sbjct: 1  MVKGLYTAYTGLVNQQNRLDVVSNNLANAATTAYKKEG 38


>gi|332994160|gb|AEF04215.1| flagellar basal body rod protein FlgG [Alteromonas sp. SN2]
          Length = 262

 Score = 57.2 bits (136), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 15/82 (18%), Positives = 26/82 (31%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +   G     +     +              A G ++  NVNV  E  ++ E+ 
Sbjct: 179 FINPTGLQPIGQNLYVETASSGAPIQGVPGLQGIGTIAQGTLETSNVNVTEELVNLIESQ 238

Query: 109 RLYMANLQTIKQSHDMMTTTLD 130
           RLY  N + I     M+   + 
Sbjct: 239 RLYEMNSKVISSVDQMLGQVIQ 260



 Score = 37.9 bits (86), Expect = 0.46,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 19/41 (46%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  +  I+ +GL      + ++S N+ANA T G       +
Sbjct: 1  MHPALWISKTGLDAAQTDVAVVSNNLANASTVGFKKDRAIF 41


>gi|239906284|ref|YP_002953024.1| flagellar hook protein FlgE [Desulfovibrio magneticus RS-1]
 gi|239796149|dbj|BAH75138.1| flagellar hook protein FlgE [Desulfovibrio magneticus RS-1]
          Length = 518

 Score = 57.2 bits (136), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 16/100 (16%), Positives = 36/100 (36%)

Query: 34  TTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
           T G T           +    ++ +G   +          V   + G   + A   ++  
Sbjct: 419 TNGQTKALYVLALADFTNPTDLYRNGNNLLSPTTESGKATVGRANSGVFDSIAGNTLESS 478

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           NV++  E  ++    R + AN + +  +  +M T L + +
Sbjct: 479 NVDMASEMVNLIINQRAFQANSKVVTTAESLMETALQIKK 518


>gi|289666050|ref|ZP_06487631.1| flagellar basal body rod protein FlgG [Xanthomonas campestris pv.
           vasculorum NCPPB702]
 gi|289670510|ref|ZP_06491585.1| flagellar basal body rod protein FlgG [Xanthomonas campestris pv.
           musacearum NCPPB4381]
          Length = 261

 Score = 57.2 bits (136), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 18/128 (14%), Positives = 31/128 (24%), Gaps = 3/128 (2%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            L     +     ++       IS  +A                        +   G   
Sbjct: 135 PLQPGIQVPEGAQSLTIGNDGTISVTLA---GQAAAQEIGALTLTDFINPSGLQAKGENL 191

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
             +                      G ++  NVN + E   M ET R Y  N + I  + 
Sbjct: 192 FVETTASGPAQNGTPGLNGLGNTVQGALEGSNVNTVEELVSMIETQRAYEMNAKAISTTD 251

Query: 123 DMMTTTLD 130
            M+    +
Sbjct: 252 SMLGYLNN 259



 Score = 44.5 bits (103), Expect = 0.005,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 21/41 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  +  +A +GL  Q  RM +IS N+AN  TTG       +
Sbjct: 1  MNQALWVAKTGLDAQQTRMSVISNNLANTNTTGFKRDRAAF 41


>gi|239995123|ref|ZP_04715647.1| flagellar basal body rod protein FlgG [Alteromonas macleodii ATCC
           27126]
          Length = 262

 Score = 57.2 bits (136), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 14/82 (17%), Positives = 27/82 (32%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +  +G     +     +              + G ++  NVNV  E  ++ E+ 
Sbjct: 179 FVNPTGLQPTGQNLYVETASSGAPIQGIPGLQGLGYISQGTLETSNVNVTEELVNLIESQ 238

Query: 109 RLYMANLQTIKQSHDMMTTTLD 130
           RLY  N + I     M+   + 
Sbjct: 239 RLYEMNSKVISSVDQMLGQVIQ 260



 Score = 39.1 bits (89), Expect = 0.22,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 19/41 (46%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  +  I+ +GL      + ++S N+ANA T G       +
Sbjct: 1  MHPALWISKTGLDAAQTDVAVVSNNLANASTVGFKKDRAVF 41


>gi|134280724|ref|ZP_01767434.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei
           305]
 gi|167725932|ref|ZP_02409168.1| flagellar basal body rod protein FlgG [Burkholderia pseudomallei
           DM98]
 gi|125657220|gb|ABN48708.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei]
 gi|134247746|gb|EBA47830.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei
           305]
          Length = 262

 Score = 57.2 bits (136), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 19/113 (16%), Positives = 30/113 (26%), Gaps = 3/113 (2%)

Query: 24  IISENIANARTTGDTPGSDPYRRKT---ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPG 80
            I EN   A T           +           +   G     +          E    
Sbjct: 150 AIGENGIVAATMPGASSPSEVGQIQLANFVNPAGLLALGDNLYMETVASGPPNEGEPGTD 209

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
                  G ++  NV V+ E  DM    R Y  N + +  + +M+       R
Sbjct: 210 VFGKIKQGALEGSNVQVVEEMVDMIAAQRTYEMNTKVLSAADNMLQQLSQAAR 262



 Score = 39.5 bits (90), Expect = 0.18,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 21/41 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  +  I+ +GL  Q A++Q ++ N+AN  T G       +
Sbjct: 1  MNQAMWISKTGLQAQDAKLQAVANNLANVNTVGFKRDRVVF 41


>gi|308050370|ref|YP_003913936.1| flagellar basal-body rod protein FlgG [Ferrimonas balearica DSM
           9799]
 gi|307632560|gb|ADN76862.1| flagellar basal-body rod protein FlgG [Ferrimonas balearica DSM
           9799]
          Length = 262

 Score = 57.2 bits (136), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 15/82 (18%), Positives = 25/82 (30%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +   G     + G   +                G ++  NVNV  E  +M E+ 
Sbjct: 179 FVNPTGLEPIGQNMFLETGASGAPIQGVPGLDGLGTLRQGALETSNVNVTEELVNMIESQ 238

Query: 109 RLYMANLQTIKQSHDMMTTTLD 130
           R+Y  N + I     M+     
Sbjct: 239 RIYEMNSKVISTVDQMLANLNQ 260



 Score = 40.2 bits (92), Expect = 0.082,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 19/41 (46%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  +  I+ +GL  Q   +  IS N+ANA T G       +
Sbjct: 1  MQPALWISKTGLDAQQTDIATISNNLANASTVGYKKSRAIF 41


>gi|149189838|ref|ZP_01868118.1| putative flagellar basal-body rod protein [Vibrio shilonii AK1]
 gi|148836324|gb|EDL53281.1| putative flagellar basal-body rod protein [Vibrio shilonii AK1]
          Length = 261

 Score = 57.2 bits (136), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 21/123 (17%), Positives = 37/123 (30%), Gaps = 3/123 (2%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            L     I ++ L +       ++   A+     D                 +   GG  
Sbjct: 135 PLEPQIQIPDNALTLSVGVDGTVTATTADGPAPQDLGQIT---LAKFVNPAGLEAIGGNL 191

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
            K+                  +   G ++  NV V+ E  DM  T R Y  N + +  + 
Sbjct: 192 FKETEASGQAEELIAGEEGAGSIKQGALEGSNVQVVEEMVDMITTQRAYEMNAKVVSAAD 251

Query: 123 DMM 125
           DM+
Sbjct: 252 DML 254



 Score = 41.0 bits (94), Expect = 0.050,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 21/41 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          + ++  ++ +G+A Q  +M  IS N+AN  T G       +
Sbjct: 1  MHSALWVSKTGMAAQDTKMTAISNNLANVNTVGFKRDRVVF 41


>gi|21231395|ref|NP_637312.1| flagellar basal body rod protein FlgG [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66768552|ref|YP_243314.1| flagellar basal body rod protein FlgG [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|188991639|ref|YP_001903649.1| flagellar basal body rod protein FlgG [Xanthomonas campestris pv.
           campestris str. B100]
 gi|325916945|ref|ZP_08179189.1| flagellar basal-body rod protein FlgG [Xanthomonas vesicatoria ATCC
           35937]
 gi|21113060|gb|AAM41236.1| flagellar biosynthesis, cell-distal portion of basal-body rod
           [Xanthomonas campestris pv. campestris str. ATCC 33913]
 gi|66573884|gb|AAY49294.1| flagellar biosynthesis, cell-distal portion of basal-body rod
           [Xanthomonas campestris pv. campestris str. 8004]
 gi|167733399|emb|CAP51600.1| unnamed protein product [Xanthomonas campestris pv. campestris]
 gi|325536848|gb|EGD08600.1| flagellar basal-body rod protein FlgG [Xanthomonas vesicatoria ATCC
           35937]
          Length = 261

 Score = 57.2 bits (136), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 18/128 (14%), Positives = 31/128 (24%), Gaps = 3/128 (2%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            L     +     ++       IS  +A                        +   G   
Sbjct: 135 PLQPGIQVPEGAQSLTIGNDGTISVTLA---GQAAAQEIGALTLTDFINPSGLQAKGENL 191

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
             +                      G ++  NVN + E   M ET R Y  N + I  + 
Sbjct: 192 FVETTASGPAQNGTPGLNGLGTTVQGALEGSNVNTVEELVSMIETQRAYEMNAKAISTTD 251

Query: 123 DMMTTTLD 130
            M+    +
Sbjct: 252 SMLGYLNN 259



 Score = 44.5 bits (103), Expect = 0.004,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 21/41 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  +  +A +GL  Q  RM +IS N+AN  TTG       +
Sbjct: 1  MNQALWVAKTGLDAQQTRMSVISNNLANTNTTGFKRDRAAF 41


>gi|255523696|ref|ZP_05390662.1| protein of unknown function DUF1078 domain protein [Clostridium
           carboxidivorans P7]
 gi|296186699|ref|ZP_06855101.1| flagellar hook-basal body protein [Clostridium carboxidivorans P7]
 gi|255512565|gb|EET88839.1| protein of unknown function DUF1078 domain protein [Clostridium
           carboxidivorans P7]
 gi|296048736|gb|EFG88168.1| flagellar hook-basal body protein [Clostridium carboxidivorans P7]
          Length = 338

 Score = 57.2 bits (136), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 25/48 (52%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             G+++  NV++  E  +M   NR + AN + I    +++   ++L R
Sbjct: 291 RQGMLEMSNVDLAEEFTNMIIANRAFQANGKIITTGDEILQDLVNLKR 338



 Score = 34.1 bits (76), Expect = 7.0,   Method: Composition-based stats.
 Identities = 20/96 (20%), Positives = 33/96 (34%), Gaps = 11/96 (11%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---- 59
          ++ S     SGL V   ++ +I  NIAN+ TT        +            G+     
Sbjct: 1  MLPSMFSGISGLKVNQRKLDVIGNNIANSSTTAYKTQRARFEDMVSQSMASATGASSKLG 60

Query: 60 -------GVRVKKIGVDQSTFVEEFDPGHPVANASG 88
                 G+ V+  G+D ST      P     + + 
Sbjct: 61 GTNPRQVGLGVQLAGIDTSTGQGSMQPTSAPLDVAI 96


>gi|224534494|ref|ZP_03675070.1| flagellar hook-basal body complex protein [Borrelia spielmanii
           A14S]
 gi|224514171|gb|EEF84489.1| flagellar hook-basal body complex protein [Borrelia spielmanii
           A14S]
          Length = 282

 Score = 57.2 bits (136), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 30/69 (43%), Gaps = 1/69 (1%)

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           I    S   +E D        +  ++  NVN + E   M E NR Y AN +TI+    ++
Sbjct: 213 IDTKTSGKAQEIDVSLRPKIETEALEASNVNAVKEMVLMIEINRAYEANQKTIQTEDSLL 272

Query: 126 TTTLD-LLR 133
              ++ + +
Sbjct: 273 GKLINEIGK 281



 Score = 44.9 bits (104), Expect = 0.003,   Method: Composition-based stats.
 Identities = 11/71 (15%), Positives = 28/71 (39%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++   + A SG+  +  ++ ++S N+AN    G        +         ++  G  + 
Sbjct: 1  MVRGIYTAASGMMAERRKLDVVSNNLANIDLIGYKKDLSIQKAFPEMLIRRLNDDGLYKF 60

Query: 64 KKIGVDQSTFV 74
           K  ++ +  V
Sbjct: 61 PKGHLETAPIV 71


>gi|292487941|ref|YP_003530816.1| flagellar basal-body rod protein FlgG [Erwinia amylovora CFBP1430]
 gi|292899160|ref|YP_003538529.1| flagellar basal-body rod protein FlgG [Erwinia amylovora ATCC
           49946]
 gi|291199008|emb|CBJ46119.1| flagellar basal-body rod protein FlgG (distal rod protein) [Erwinia
           amylovora ATCC 49946]
 gi|291553363|emb|CBA20408.1| Flagellar basal-body rod protein flgG [Erwinia amylovora CFBP1430]
 gi|312172062|emb|CBX80319.1| Flagellar basal-body rod protein flgG [Erwinia amylovora ATCC
           BAA-2158]
          Length = 260

 Score = 57.2 bits (136), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 27/131 (20%), Positives = 44/131 (33%), Gaps = 7/131 (5%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            +  +  I  + L++  +R  ++S         G        +    +F      S    
Sbjct: 135 PVQPAIVIPANSLSMTVSRDGVVS-----VTQQGQANPVQVGQLTLSTFMNDAGLSSMGE 189

Query: 63  VKKIGVDQSTFVEEFDPGHPVANA--SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
                   S    E +PG+  A     G V+  NVNV  E   M +T R Y  N + I  
Sbjct: 190 NLYQETQASGVPNESNPGNNGAGTLYQGYVETSNVNVAEELVSMIQTQRAYEINSKAIST 249

Query: 121 SHDMMTTTLDL 131
           S  M+     +
Sbjct: 250 SDQMLAKLTQI 260



 Score = 41.8 bits (96), Expect = 0.032,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 21/61 (34%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I S  IA +GL  Q   M +I+ N+AN  T G       +                 + 
Sbjct: 1  MIRSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLMYQTMRQPGAQSSEQT 60

Query: 64 K 64
           
Sbjct: 61 T 61


>gi|255021356|ref|ZP_05293404.1| Flagellar basal-body rod protein flgG [Acidithiobacillus caldus
           ATCC 51756]
 gi|254969219|gb|EET26733.1| Flagellar basal-body rod protein flgG [Acidithiobacillus caldus
           ATCC 51756]
          Length = 261

 Score = 57.2 bits (136), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 18/115 (15%), Positives = 32/115 (27%)

Query: 16  AVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVE 75
             QS  +                      +         +   G     + G   +    
Sbjct: 145 NAQSITIGTDGTVSVVLPGQSQPQQVGSIQLANFINPTGLQSIGDNLYLQTGSSGAPQTG 204

Query: 76  EFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           +       +   G ++  NVNV+ E  DM  T R Y  N + +  S  M+   + 
Sbjct: 205 QPTLNGLGSVQQGYLESSNVNVVSELVDMIATQRAYEINSKAVSTSDSMLGYAIQ 259



 Score = 41.0 bits (94), Expect = 0.062,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 24/42 (57%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S ++A +GL  +  +M +I+ N+AN  TTG       ++
Sbjct: 1  MMRSLYVAATGLEGEQTKMDVIANNLANVNTTGFKQSRAVFQ 42


>gi|303326942|ref|ZP_07357384.1| flagellar hook protein FlgE [Desulfovibrio sp. 3_1_syn3]
 gi|302862930|gb|EFL85862.1| flagellar hook protein FlgE [Desulfovibrio sp. 3_1_syn3]
          Length = 817

 Score = 57.2 bits (136), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 25/75 (33%), Gaps = 1/75 (1%)

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGI-VKYPNVNVLVETADMRETNRLYMANLQTI 118
           G  +     D           +         ++  NV++  E   M  T R + AN + I
Sbjct: 743 GGNLFSSTNDSGEPRIGVAGDNGFGTTKAYNIEQSNVDMSREFVQMITTQRGFQANSKGI 802

Query: 119 KQSHDMMTTTLDLLR 133
                M+ T + + R
Sbjct: 803 TTVDTMLETVIGMKR 817



 Score = 39.5 bits (90), Expect = 0.15,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 26/81 (32%), Gaps = 4/81 (4%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPG----SDPYRRKTISFEEVMHG 57
            L AS   + SGL     +M ++  NIAN  T G        +D       S       
Sbjct: 1  MGLSASMWTSVSGLLAHGNKMNLVGNNIANVSTIGFKSQRMDFNDYLYMSGSSASGPTQI 60

Query: 58 SGGVRVKKIGVDQSTFVEEFD 78
            GV    +  D S    E  
Sbjct: 61 GAGVSTYAVLGDYSQGALETT 81


>gi|149191155|ref|ZP_01869413.1| putative flagellar basal-body rod protein [Vibrio shilonii AK1]
 gi|148834993|gb|EDL51972.1| putative flagellar basal-body rod protein [Vibrio shilonii AK1]
          Length = 261

 Score = 57.2 bits (136), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 17/107 (15%), Positives = 33/107 (30%), Gaps = 2/107 (1%)

Query: 22  MQIISENIANARTTGDTPGSDPYRRK--TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDP 79
           + I ++ +A A   G        +           +   GG    +              
Sbjct: 149 VSITADGVATATIPGQVNPEALGQITIVKFMNPAGLAAQGGNLFAETEGSGEAVELVAGT 208

Query: 80  GHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
                   G ++  NV V+ E  DM  T R Y  + + +  + +M+ 
Sbjct: 209 EGSGQLKQGALEGSNVQVVEEMVDMIATQRAYEMSAKMVSAADEMLQ 255



 Score = 41.4 bits (95), Expect = 0.037,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 22/41 (53%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          + ++  I+ +G+A Q A+M  IS N+AN  T G       +
Sbjct: 1  MHSALWISKTGMAAQDAKMTAISNNLANINTVGFKRDRVVF 41


>gi|167567752|ref|ZP_02360668.1| flagellar basal body rod protein FlgG [Burkholderia oklahomensis
           EO147]
 gi|167574703|ref|ZP_02367577.1| flagellar basal body rod protein FlgG [Burkholderia oklahomensis
           C6786]
          Length = 258

 Score = 57.2 bits (136), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 12/85 (14%), Positives = 23/85 (27%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +   G     +          +           G ++  NV V+ E  +M    
Sbjct: 174 FVNPAGLLSIGDNLYMETVASGPPNEGDPGTDAFGKIKQGSLEASNVKVVDEMVEMIAAQ 233

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R Y  N + +  +  M+       R
Sbjct: 234 RTYEMNTKVLSAADSMLQYLAQAAR 258


>gi|114706771|ref|ZP_01439671.1| flagellar basal-body rod protein [Fulvimarina pelagi HTCC2506]
 gi|114537719|gb|EAU40843.1| flagellar basal-body rod protein [Fulvimarina pelagi HTCC2506]
          Length = 260

 Score = 57.2 bits (136), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 17/95 (17%), Positives = 33/95 (34%)

Query: 32  ARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVK 91
           AR  G+          T +    +H  GG    +     +  V             G ++
Sbjct: 159 ARVEGELQDVGQLTLATFANNAGLHAEGGNLFSETVASGAPVVGVPGDPGYGVVHQGYLE 218

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
             NV+ + E +++    R Y  N + I  + +M +
Sbjct: 219 DSNVDPVKEISELISAQRAYEMNSKIISAADEMAS 253



 Score = 44.5 bits (103), Expect = 0.006,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 21/40 (52%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          + +  IA +G+  Q   +++I+ NIAN  TTG       +
Sbjct: 1  MRALAIAATGMNAQETNVEVIANNIANVNTTGFKRARAEF 40


>gi|300114797|ref|YP_003761372.1| flagellar basal-body rod protein FlgG [Nitrosococcus watsonii
           C-113]
 gi|299540734|gb|ADJ29051.1| flagellar basal-body rod protein FlgG [Nitrosococcus watsonii
           C-113]
          Length = 261

 Score = 57.2 bits (136), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 40/123 (32%), Gaps = 3/123 (2%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            +     I  S L+V      I+S  +      G    +   +         +  +G   
Sbjct: 135 PVQPGITIPQSALSVTVGSDGIVSVLM---PGDGTPVQAGNLQLADFINPAGLQPTGNNL 191

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
            K+                      G ++  NVNV+ E  +M ET R Y  N + I  + 
Sbjct: 192 FKETAASGVAQTGIPGLNGIGTLVQGALEGANVNVVEELVNMIETQRAYEMNSKAISSTD 251

Query: 123 DMM 125
           +M+
Sbjct: 252 EML 254



 Score = 46.4 bits (108), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/41 (36%), Positives = 20/41 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  +  IA +GL  Q  RM  IS N+AN  TTG       +
Sbjct: 1  MNQALWIAKTGLDAQQTRMATISNNLANVNTTGFKRDRAVF 41


>gi|209963565|ref|YP_002296480.1| flagellar basal-body rod protein FlgG [Rhodospirillum centenum SW]
 gi|209957031|gb|ACI97667.1| flagellar basal-body rod protein FlgG [Rhodospirillum centenum SW]
          Length = 261

 Score = 57.2 bits (136), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 15/103 (14%), Positives = 31/103 (30%)

Query: 29  IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASG 88
           +A      +      +   T   E  +   G    ++        +             G
Sbjct: 158 LAFIDGQTEPENVGQFEVATFVNEAGLEAMGDNLFRETPASGIPILGIPGQLGYGGIRQG 217

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            V+  NVN++ E   +    R Y  N + ++    M+ T   +
Sbjct: 218 YVEAANVNIVQEITSLISAQRAYEMNSRVVEAGDQMLNTVTQM 260



 Score = 41.8 bits (96), Expect = 0.031,   Method: Composition-based stats.
 Identities = 12/62 (19%), Positives = 25/62 (40%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          + + +IA +G+  Q   +++IS NIAN  T G       ++      +         +  
Sbjct: 1  MRTLNIAATGMMAQQLNVEVISNNIANLNTVGFKRSRAEFQDLMYQAQVRPGSESSDQDT 60

Query: 65 KI 66
           +
Sbjct: 61 IV 62


>gi|163794152|ref|ZP_02188125.1| Flagellar basal body rod protein [alpha proteobacterium BAL199]
 gi|159180766|gb|EDP65285.1| Flagellar basal body rod protein [alpha proteobacterium BAL199]
          Length = 261

 Score = 57.2 bits (136), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 18/125 (14%), Positives = 37/125 (29%), Gaps = 3/125 (2%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
               I +  L+V    +    +  A              +      +  +   G   + +
Sbjct: 138 PGITIPSDTLSVT---INESGQVFAQIDGQVQEQNVGQLQLAIFQNDAGLENIGQNLLLE 194

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
                +                G V+  NV+ + E  ++    R Y  N + I+ S  MM
Sbjct: 195 TSASGAATTGVPGATGFGKLQQGFVEASNVDPVHEITNLITAQRAYELNSKIIETSDQMM 254

Query: 126 TTTLD 130
           +T  +
Sbjct: 255 STVNN 259



 Score = 42.2 bits (97), Expect = 0.024,   Method: Composition-based stats.
 Identities = 15/41 (36%), Positives = 25/41 (60%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          + S +IA++G+A Q   +++IS NIAN  TTG       ++
Sbjct: 1  MQSLNIASTGMAAQQFNVEVISNNIANMNTTGYKRQRAEFQ 41


>gi|260429403|ref|ZP_05783380.1| flagellar basal-body rod protein FlgG [Citreicella sp. SE45]
 gi|260420026|gb|EEX13279.1| flagellar basal-body rod protein FlgG [Citreicella sp. SE45]
          Length = 261

 Score = 57.2 bits (136), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 12/82 (14%), Positives = 27/82 (32%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +  + +   GG    +                      G ++  +V+ + E  ++ E  
Sbjct: 178 FTNPKGLEAIGGNLFTETEASGPPIQTTAGQEGLGTFRQGYLEDSSVDPVYEITELIEAQ 237

Query: 109 RLYMANLQTIKQSHDMMTTTLD 130
           R Y  N + I  +  M+  T+ 
Sbjct: 238 RGYELNSKVISAADQMLGATVQ 259



 Score = 42.6 bits (98), Expect = 0.016,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 23/41 (56%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          + +  IA +G++ Q  R+++IS N++N  TTG       + 
Sbjct: 1  MRALKIAATGMSAQQMRVEVISNNLSNMSTTGYNARRAEFA 41


>gi|258592496|emb|CBE68805.1| putative Flagellar hook protein flgE [NC10 bacterium 'Dutch
           sediment']
          Length = 412

 Score = 57.2 bits (136), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 15/44 (34%), Positives = 25/44 (56%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  NV++  E  ++    R Y AN Q I  ++ +  TTL+LLR
Sbjct: 369 LEQSNVDLGTELVNLIIAQRGYEANAQVISVANQIQQTTLNLLR 412



 Score = 37.2 bits (84), Expect = 0.72,   Method: Composition-based stats.
 Identities = 12/38 (31%), Positives = 18/38 (47%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSD 42
          +++   A +GL      + +I  NIANA TTG      
Sbjct: 1  MSTFSTAITGLKAYQTDLGVIGNNIANANTTGYKASRA 38


>gi|222084865|ref|YP_002543394.1| flagellar basal-body rod protein [Agrobacterium radiobacter K84]
 gi|221722313|gb|ACM25469.1| flagellar basal-body rod protein [Agrobacterium radiobacter K84]
          Length = 262

 Score = 57.2 bits (136), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 14/78 (17%), Positives = 25/78 (32%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
              E  +   G     +        V + +         G ++  NV+ + E  D+    
Sbjct: 178 FVNEAGLQPMGSNLFTQTPASGDPVVSDPNENGFAYMKQGYLESSNVDPVKEITDLITAQ 237

Query: 109 RLYMANLQTIKQSHDMMT 126
           R Y  N + I  + DM  
Sbjct: 238 RAYEMNSKVITTADDMAQ 255



 Score = 41.4 bits (95), Expect = 0.037,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 21/40 (52%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          + +  IA +G+  Q   +++I+ NIAN  TTG       +
Sbjct: 1  MRALAIAATGMDAQQTNLEVIANNIANINTTGYKRSRAEF 40


>gi|218249387|ref|YP_002375274.1| flagellar hook-basal body complex protein [Borrelia burgdorferi
           ZS7]
 gi|221217927|ref|ZP_03589394.1| flagellar hook-basal body complex protein [Borrelia burgdorferi
           72a]
 gi|224533400|ref|ZP_03673994.1| flagellar hook-basal body complex protein [Borrelia burgdorferi
           CA-11.2a]
 gi|225549985|ref|ZP_03770946.1| flagellar hook-basal body complex protein [Borrelia burgdorferi
           118a]
 gi|218164575|gb|ACK74636.1| flagellar hook-basal body complex protein [Borrelia burgdorferi
           ZS7]
 gi|221192233|gb|EEE18453.1| flagellar hook-basal body complex protein [Borrelia burgdorferi
           72a]
 gi|224513565|gb|EEF83922.1| flagellar hook-basal body complex protein [Borrelia burgdorferi
           CA-11.2a]
 gi|225369444|gb|EEG98896.1| flagellar hook-basal body complex protein [Borrelia burgdorferi
           118a]
          Length = 282

 Score = 57.2 bits (136), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 16/94 (17%), Positives = 35/94 (37%), Gaps = 12/94 (12%)

Query: 41  SDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVE 100
            +P   K       +      + ++I +     +            +  ++  NVN + E
Sbjct: 199 ENPRFLKKQGNSLWIDTKTSGKAQEIDISLRPKI-----------ETETLEASNVNAVKE 247

Query: 101 TADMRETNRLYMANLQTIKQSHDMMTTTLD-LLR 133
              M E NR Y AN +TI+    ++   ++ + +
Sbjct: 248 MVLMIEINRAYEANQKTIQTEDSLLGKLINEIGK 281



 Score = 45.2 bits (105), Expect = 0.003,   Method: Composition-based stats.
 Identities = 11/71 (15%), Positives = 27/71 (38%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++   + A SG+  +  ++  +S N+AN    G        +         ++  G  + 
Sbjct: 1  MVRGIYTAASGMMAERRKLDTVSNNLANIDLIGYKKDLSIQKAFPEMLIRRLNDDGLYKF 60

Query: 64 KKIGVDQSTFV 74
           K  ++ +  V
Sbjct: 61 PKGHLETAPVV 71


>gi|224532206|ref|ZP_03672838.1| flagellar hook-basal body complex protein [Borrelia valaisiana
           VS116]
 gi|224511671|gb|EEF82077.1| flagellar hook-basal body complex protein [Borrelia valaisiana
           VS116]
          Length = 282

 Score = 57.2 bits (136), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 25/45 (55%), Gaps = 1/45 (2%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD-LLR 133
           ++  NVN + E   M E NR Y AN +TI+   +++   ++ + +
Sbjct: 237 LEASNVNPVKEMVLMIEINRAYEANQKTIQTEDNLLGKLINEIGK 281



 Score = 45.2 bits (105), Expect = 0.003,   Method: Composition-based stats.
 Identities = 11/71 (15%), Positives = 28/71 (39%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++   + A SG+  +  ++ ++S N+AN    G        +         ++  G  + 
Sbjct: 1  MVRGIYTAASGMMAERRKLDVVSNNLANIDLVGYKKDLSIQKAFPEMLIRRLNDDGLYKF 60

Query: 64 KKIGVDQSTFV 74
           K  ++ +  V
Sbjct: 61 PKGHLETAPIV 71


>gi|310816831|ref|YP_003964795.1| flagellar basal-body rod protein FlgG [Ketogulonicigenium vulgare
           Y25]
 gi|308755566|gb|ADO43495.1| flagellar basal-body rod protein FlgG [Ketogulonicigenium vulgare
           Y25]
          Length = 261

 Score = 57.2 bits (136), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 15/116 (12%), Positives = 30/116 (25%)

Query: 16  AVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVE 75
             QS  +    E  A+     +                 +   G     +        V 
Sbjct: 145 DAQSVAINADGEVYASFTNAVEQEFLGQLNLAMFVNPRGLEAMGSNLYLETAASGQPMVA 204

Query: 76  EFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
                       G ++   V+ + E  D+    R Y  N + I  +  M+   + +
Sbjct: 205 VPGEDGLGTLRQGYLEQSTVDAVREVTDLIAAQRGYELNSKVISAADQMLAAMVQI 260



 Score = 45.2 bits (105), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 21/41 (51%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          +    IA +G+  Q  R+++IS N+AN  TT   P    + 
Sbjct: 1  MRILDIAATGMLAQQTRVEVISNNLANMNTTAYNPRRAEFA 41


>gi|251789170|ref|YP_003003891.1| flagellar basal-body rod protein FlgG [Dickeya zeae Ech1591]
 gi|247537791|gb|ACT06412.1| flagellar basal-body rod protein FlgG [Dickeya zeae Ech1591]
          Length = 260

 Score = 57.2 bits (136), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 16/83 (19%), Positives = 24/83 (28%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
              E  +   G     +     +                  V+  NVNV  E   M +T 
Sbjct: 178 FINEAGLENLGENLYAETASSGAPTQSTPGLNGAGLIYQKFVETSNVNVAEELVSMIQTQ 237

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y  N + I  +  M+     L
Sbjct: 238 RAYEINSKAISSTDQMLQKLTQL 260



 Score = 47.2 bits (110), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 18/93 (19%), Positives = 26/93 (27%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I S  IA +GL  Q   M +IS N+AN  T G       +                 + 
Sbjct: 1  MIRSLWIAKTGLNAQQTNMDVISNNLANVSTNGFKRQRAVFEDLMYQTVRQPGAQSSEQT 60

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVN 96
                Q            +       +  NV 
Sbjct: 61 TLPSGLQLGTGVRPVATERIHTQGSFSETGNVK 93


>gi|227820858|ref|YP_002824828.1| flagellar basal body rod protein FlgG [Sinorhizobium fredii NGR234]
 gi|227339857|gb|ACP24075.1| flagellar basal-body rod protein FlgG [Sinorhizobium fredii NGR234]
          Length = 262

 Score = 57.2 bits (136), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 15/79 (18%), Positives = 26/79 (32%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
              E  +   G    K+        V             G ++  NV+ + E  D+    
Sbjct: 178 FVNEAGLEPQGENLFKQTAASGEPIVGTPADPGFAQIKQGYLESSNVDPVKEITDLISAQ 237

Query: 109 RLYMANLQTIKQSHDMMTT 127
           R Y  N + I+ + +M  T
Sbjct: 238 RAYEMNSKVIQAADEMAAT 256



 Score = 44.9 bits (104), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/97 (18%), Positives = 32/97 (32%), Gaps = 4/97 (4%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           + +  IA +G+  Q   +++I+ NIAN  TTG       +             + GV  +
Sbjct: 1   MKALSIAATGMNAQQLNLEVIANNIANINTTGYKRARAEF----SDLLYQTERAQGVPNR 56

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVET 101
                              A  +  V+   VN   + 
Sbjct: 57  SNQAIVPEGAIVGLGVQTAAVRNLHVQGSLVNTSNDL 93


>gi|304321133|ref|YP_003854776.1| flagellar basal-body rod protein FlgG [Parvularcula bermudensis
           HTCC2503]
 gi|303300035|gb|ADM09634.1| flagellar basal-body rod protein FlgG [Parvularcula bermudensis
           HTCC2503]
          Length = 251

 Score = 57.2 bits (136), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 15/116 (12%), Positives = 36/116 (31%)

Query: 16  AVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVE 75
             +   +    E  A      +          +    + +   GG   ++     +    
Sbjct: 135 EARQVTISADGEVFAFFDDAVEGQSIGTITLTSFVNPKGLEAMGGNLYRETTASGTPING 194

Query: 76  EFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +           G ++   V+V+ E AD+ E  R Y  N + +  + +M  +   +
Sbjct: 195 QPGQDGLGLLRQGYLEESGVDVVSEIADLIEAQRGYELNSKVLTAADEMYASATRI 250



 Score = 34.1 bits (76), Expect = 6.3,   Method: Composition-based stats.
 Identities = 12/79 (15%), Positives = 24/79 (30%)

Query: 15 LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFV 74
          +A Q  R+ +I+ NIAN  TT     S  +       +         +   +       +
Sbjct: 1  MAAQQTRVDVIANNIANMSTTAYAARSAVFADLIYRQDVNPGAISSTQGTIVPTGVQLGL 60

Query: 75 EEFDPGHPVANASGIVKYP 93
                  +    G ++  
Sbjct: 61 GVQTQAVSMDMRQGALRQT 79


>gi|307131607|ref|YP_003883623.1| flagellar basal-body rod protein flgG [Dickeya dadantii 3937]
 gi|306529136|gb|ADM99066.1| Flagellar basal-body rod protein flgG [Dickeya dadantii 3937]
          Length = 260

 Score = 56.8 bits (135), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 16/83 (19%), Positives = 24/83 (28%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
              E  +   G     +     +                  V+  NVNV  E   M +T 
Sbjct: 178 FINEAGLENLGENLYAETASSGAPTQSTPGLNGAGLIYQKFVETSNVNVAEELVSMIQTQ 237

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y  N + I  +  M+     L
Sbjct: 238 RAYEINSKAISSTDQMLQKLTQL 260



 Score = 47.2 bits (110), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 18/93 (19%), Positives = 26/93 (27%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I S  IA +GL  Q   M +IS N+AN  T G       +                 + 
Sbjct: 1  MIRSLWIAKTGLNAQQTNMDVISNNLANVSTNGFKRQRAVFEDLMYQTVRQPGAQSSEQT 60

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVN 96
                Q            +       +  NV 
Sbjct: 61 TLPSGLQLGTGVRPVATERIHTQGSFSETGNVK 93


>gi|312115249|ref|YP_004012845.1| flagellar basal-body rod protein FlgG [Rhodomicrobium vannielii
           ATCC 17100]
 gi|311220378|gb|ADP71746.1| flagellar basal-body rod protein FlgG [Rhodomicrobium vannielii
           ATCC 17100]
          Length = 261

 Score = 56.8 bits (135), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 13/81 (16%), Positives = 27/81 (33%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
           T   +  +   G    ++     S  V+              V+  NV+ + E  ++   
Sbjct: 176 TFVNDAGLEALGNNLFRETISSGSAQVQVPGSEGYATVQQYYVESSNVDPVQEITNLISA 235

Query: 108 NRLYMANLQTIKQSHDMMTTT 128
            R Y  N + I+ + +M    
Sbjct: 236 QRNYEMNSKVIQAADEMFQVL 256



 Score = 41.0 bits (94), Expect = 0.053,   Method: Composition-based stats.
 Identities = 12/64 (18%), Positives = 22/64 (34%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          + +  +A +G+  Q   +++I+ NIANA T         +       E            
Sbjct: 1  MRALSVAATGMVAQQTNVEVIANNIANANTVAFKRSRAEFADLLYQSERAAGVPNRSDAD 60

Query: 65 KIGV 68
           I  
Sbjct: 61 AIPE 64


>gi|153951692|ref|YP_001399003.1| flagellar hook protein FlgE [Campylobacter jejuni subsp. doylei
           269.97]
 gi|152939138|gb|ABS43879.1| flagellar hook protein [Campylobacter jejuni subsp. doylei 269.97]
          Length = 875

 Score = 56.8 bits (135), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 23/106 (21%), Positives = 39/106 (36%)

Query: 28  NIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANAS 87
           NI    T G T         +++    +   GG   K      +  V E   G      +
Sbjct: 770 NILGEFTNGKTFAVAKMAMASVANNSGLEEIGGNLFKVTANSGNIVVGEAGTGGRGEMKT 829

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             ++  NV++     ++    R Y AN +TI  S  M+ T + L +
Sbjct: 830 AALEMSNVDLSRSLTELIIIQRGYQANSKTISTSDQMLQTLIQLKQ 875



 Score = 34.8 bits (78), Expect = 3.8,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 25/72 (34%), Gaps = 4/72 (5%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR----RKTISFEEVMHGSG 59
          ++ S     SGL      M +   NI+N  TTG       +     +          G G
Sbjct: 1  MMRSLWSGVSGLQAHQVAMDVEGNNISNVNTTGFKYSRADFGTMFSQTVKIATTPTDGRG 60

Query: 60 GVRVKKIGVDQS 71
          G    +IG+  S
Sbjct: 61 GQNPLQIGLGVS 72


>gi|293115683|ref|ZP_05792615.2| flagellar hook protein FlgE [Butyrivibrio crossotus DSM 2876]
 gi|292808788|gb|EFF67993.1| flagellar hook protein FlgE [Butyrivibrio crossotus DSM 2876]
          Length = 440

 Score = 56.8 bits (135), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 14/44 (31%), Positives = 23/44 (52%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  NV++  E  DM  T R Y AN + I  S  ++   ++L R
Sbjct: 397 LEMSNVDLAAEFTDMITTQRGYQANSRIITVSDTLLEELINLKR 440



 Score = 36.8 bits (83), Expect = 1.00,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 28/74 (37%), Gaps = 6/74 (8%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG------DTPGSDPYRRKTISFEEVMHG 57
          ++ + +   +GL     +M +I  NIAN  T G                +  S      G
Sbjct: 1  MMRALYSGVAGLKTHQTKMDVIGNNIANVNTVGFKSQSVTFSDVFYQTTQNASGANAETG 60

Query: 58 SGGVRVKKIGVDQS 71
           GG   K+IG+  +
Sbjct: 61 MGGTNAKQIGLGST 74


>gi|291617022|ref|YP_003519764.1| FlgG [Pantoea ananatis LMG 20103]
 gi|291152052|gb|ADD76636.1| FlgG [Pantoea ananatis LMG 20103]
 gi|327393473|dbj|BAK10895.1| flagellar basal-body rod protein FlgG [Pantoea ananatis AJ13355]
          Length = 260

 Score = 56.8 bits (135), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 21/129 (16%), Positives = 36/129 (27%), Gaps = 3/129 (2%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            +     I  +  ++  +R  ++S      +              T      +   G   
Sbjct: 135 PVQPGITIPANATSITVSRDGVVS---VTQQGQTQAAQVGQLTLSTFMNNAGLDSVGENL 191

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
            K+     +                G  +  NVNV  E   M +T R Y  N + I  S 
Sbjct: 192 YKETQASGAPTDSTPGQNGAGLLYQGYAETSNVNVAEELVTMIQTQRAYEINSKAISTSD 251

Query: 123 DMMTTTLDL 131
            M+     L
Sbjct: 252 QMLAKLTQL 260



 Score = 42.6 bits (98), Expect = 0.021,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 21/61 (34%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I S  IA +GL  Q   M +I+ N+AN  T G       +                 + 
Sbjct: 1  MIRSLWIAKTGLDAQQMNMDVIANNLANVSTNGFKRSRAVFEDLMYQTMRQPGTQSSEQT 60

Query: 64 K 64
           
Sbjct: 61 T 61


>gi|195941596|ref|ZP_03086978.1| flagellar hook-basal body complex protein (flhO) [Borrelia
           burgdorferi 80a]
 gi|216264480|ref|ZP_03436472.1| flagellar hook-basal body complex protein [Borrelia burgdorferi
           156a]
 gi|226320635|ref|ZP_03796194.1| flagellar hook-basal body complex protein [Borrelia burgdorferi
           29805]
 gi|215980953|gb|EEC21760.1| flagellar hook-basal body complex protein [Borrelia burgdorferi
           156a]
 gi|226233958|gb|EEH32680.1| flagellar hook-basal body complex protein [Borrelia burgdorferi
           29805]
 gi|312148084|gb|ADQ30743.1| flagellar hook-basal body complex protein [Borrelia burgdorferi
           JD1]
 gi|312149492|gb|ADQ29563.1| flagellar hook-basal body complex protein [Borrelia burgdorferi
           N40]
          Length = 282

 Score = 56.8 bits (135), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 1/45 (2%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD-LLR 133
           ++  NVN + E   M E NR Y AN +TI+    ++   ++ + +
Sbjct: 237 LEASNVNAVKEMVLMIEINRAYEANQKTIQTEDSLLGKLINEIGK 281



 Score = 45.2 bits (105), Expect = 0.003,   Method: Composition-based stats.
 Identities = 11/71 (15%), Positives = 27/71 (38%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++   + A SG+  +  ++  +S N+AN    G        +         ++  G  + 
Sbjct: 1  MVRGIYTAASGMMAERRKLDTVSNNLANIDLIGYKKDLSIQKAFPEMLIRRLNDDGLYKF 60

Query: 64 KKIGVDQSTFV 74
           K  ++ +  V
Sbjct: 61 PKGHLETAPVV 71


>gi|331269322|ref|YP_004395814.1| flagellar basal-body rod protein FlgG [Clostridium botulinum
           BKT015925]
 gi|329125872|gb|AEB75817.1| flagellar basal-body rod protein FlgG [Clostridium botulinum
           BKT015925]
          Length = 491

 Score = 56.8 bits (135), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 19/132 (14%), Positives = 41/132 (31%), Gaps = 5/132 (3%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
           D  + S  I   GL         ++     A     T             + +   +   
Sbjct: 365 DKKLRSFSIEKDGLVKGVLDDGTVT-----ALGQIATASFKNQEGLKKEGKNLFSNTANS 419

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
            V  +           +         G+++  NV++  +  DM  T R + A+ + I   
Sbjct: 420 GVPTVRSGLGAPKNLDNGDGYGEMLQGMLEMSNVDLAEQFTDMIVTTRAFQASGKMISTG 479

Query: 122 HDMMTTTLDLLR 133
            +++   ++L R
Sbjct: 480 DEILQDIINLKR 491


>gi|297538896|ref|YP_003674665.1| fagellar hook-basal body protein [Methylotenera sp. 301]
 gi|297258243|gb|ADI30088.1| fagellar hook-basal body protein [Methylotenera sp. 301]
          Length = 422

 Score = 56.8 bits (135), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 18/83 (21%), Positives = 31/83 (37%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +    +   GG    +     +      + G      S  V+  N ++  E  +M    
Sbjct: 339 FANPNGLQSLGGNAWSESSTSGTPLTGVPNTGTLGVLQSSAVEDSNTDLTAELVNMITAQ 398

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y AN QTIK    ++ T ++L
Sbjct: 399 RYYQANAQTIKTQDQVLQTLVNL 421



 Score = 34.5 bits (77), Expect = 5.4,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 18/39 (46%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          S     SGL   S ++++I  N+ANA T G       + 
Sbjct: 2  SFQQGLSGLNAASKQLEVIGNNVANANTVGFKQSRAEFA 40


>gi|225548842|ref|ZP_03769819.1| flagellar hook-basal body complex protein [Borrelia burgdorferi
           94a]
 gi|225370445|gb|EEG99881.1| flagellar hook-basal body complex protein [Borrelia burgdorferi
           94a]
          Length = 282

 Score = 56.8 bits (135), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 16/94 (17%), Positives = 35/94 (37%), Gaps = 12/94 (12%)

Query: 41  SDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVE 100
            +P   K       +      + ++I +     +            +  ++  NVN + E
Sbjct: 199 ENPRFLKKQGNSLWIDTKTSGKAQEIDISLRPKI-----------ETETLEASNVNTVKE 247

Query: 101 TADMRETNRLYMANLQTIKQSHDMMTTTLD-LLR 133
              M E NR Y AN +TI+    ++   ++ + +
Sbjct: 248 MVLMIEINRAYEANQKTIQTEDSLLGKLINEIGK 281



 Score = 45.2 bits (105), Expect = 0.003,   Method: Composition-based stats.
 Identities = 11/71 (15%), Positives = 27/71 (38%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++   + A SG+  +  ++  +S N+AN    G        +         ++  G  + 
Sbjct: 1  MVRGIYTAASGMMAERRKLDTVSNNLANIDLIGYKKDLSIQKAFPEMLIRRLNDDGLYKF 60

Query: 64 KKIGVDQSTFV 74
           K  ++ +  V
Sbjct: 61 PKGHLETAPVV 71


>gi|152980177|ref|YP_001353111.1| flagellar hook protein FlgE [Janthinobacterium sp. Marseille]
 gi|151280254|gb|ABR88664.1| FlgE flagellar hook protein [Janthinobacterium sp. Marseille]
          Length = 416

 Score = 56.8 bits (135), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 17/83 (20%), Positives = 30/83 (36%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +    +   G  +  +                     S  ++  NV++  E  +M    
Sbjct: 333 FANPNGLQNIGDNQWVETAESGVPLTSTPGSSGLGVVQSARIEESNVDLTAELVNMITAQ 392

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R+Y AN QTIK    +M T ++L
Sbjct: 393 RVYQANAQTIKTQDQIMQTLVNL 415


>gi|126668558|ref|ZP_01739512.1| flagellar hook protein E [Marinobacter sp. ELB17]
 gi|126626963|gb|EAZ97606.1| flagellar hook protein E [Marinobacter sp. ELB17]
          Length = 435

 Score = 56.8 bits (135), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 34/83 (40%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +  + +  SG     +        +   D G   A  S  V+  NV++  E  ++    
Sbjct: 352 FNNTDGLSPSGDTSWVETFESGQAVIGRPDSGTLGAIQSSSVEESNVDLSAELVNLIIAQ 411

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y AN +TI+ S  +  T ++L
Sbjct: 412 RNYQANAKTIETSDAVTQTIINL 434



 Score = 34.8 bits (78), Expect = 4.1,   Method: Composition-based stats.
 Identities = 10/30 (33%), Positives = 15/30 (50%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTG 36
          + +   SGL   +  + +   NIANA T G
Sbjct: 2  AFNTGLSGLRAAAVDLDVTGNNIANASTVG 31


>gi|320354325|ref|YP_004195664.1| flagellar hook-basal body protein [Desulfobulbus propionicus DSM
           2032]
 gi|320122827|gb|ADW18373.1| flagellar hook-basal body protein [Desulfobulbus propionicus DSM
           2032]
          Length = 434

 Score = 56.8 bits (135), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 23/44 (52%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  NV++  E   M  T R + AN + I    +M++  ++L R
Sbjct: 391 LEQSNVDMGQEFVKMITTQRGFQANSKIITTVDEMLSELINLKR 434


>gi|315637837|ref|ZP_07893027.1| flagellar hook protein [Campylobacter upsaliensis JV21]
 gi|315482078|gb|EFU72692.1| flagellar hook protein [Campylobacter upsaliensis JV21]
          Length = 545

 Score = 56.8 bits (135), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 27/48 (56%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             G ++  NV++ +E +++  T R + A+ ++I  S  M+   +++ +
Sbjct: 498 KGGFLEQSNVDLSMELSNLIVTQRAFDASSKSITTSDQMIQKAINMKK 545


>gi|224532954|ref|ZP_03673563.1| flagellar hook-basal body complex protein [Borrelia burgdorferi
           WI91-23]
 gi|224512118|gb|EEF82510.1| flagellar hook-basal body complex protein [Borrelia burgdorferi
           WI91-23]
          Length = 282

 Score = 56.8 bits (135), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 1/45 (2%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD-LLR 133
           ++  NVN + E   M E NR Y AN +TI+    ++   ++ + +
Sbjct: 237 LEASNVNAVKEMVLMIEINRAYEANQKTIQTEDSLLGKLINEIGK 281



 Score = 45.6 bits (106), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/71 (15%), Positives = 27/71 (38%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++   + A SG+  +  ++  +S N+AN    G        +         ++  G  + 
Sbjct: 1  MVRGIYTAASGMMAERRKLDTVSNNLANIDLIGYKKDLSIQKAFPEMLIRRLNDDGLYKF 60

Query: 64 KKIGVDQSTFV 74
           K  ++ +  V
Sbjct: 61 PKGHLETAPIV 71


>gi|152997580|ref|YP_001342415.1| flagellar basal-body rod protein FlgG [Marinomonas sp. MWYL1]
 gi|150838504|gb|ABR72480.1| flagellar basal-body rod protein FlgG [Marinomonas sp. MWYL1]
          Length = 261

 Score = 56.8 bits (135), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 17/98 (17%), Positives = 29/98 (29%)

Query: 33  RTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKY 92
               D                 +  +G     +        V           A G+++ 
Sbjct: 162 NGDADAQQVGAINIAGFINPTGLSSAGQNLFTETNASGPPLVGVPGTDSLGTIAQGMLEA 221

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            NVN + E  +M  T R Y  N + I  +  MM+  + 
Sbjct: 222 SNVNSIEELVNMITTQRAYEMNSKVIASADGMMSFAIQ 259



 Score = 36.4 bits (82), Expect = 1.3,   Method: Composition-based stats.
 Identities = 7/41 (17%), Positives = 21/41 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          + ++  ++ +GL+    ++ +++ N+AN  TT        +
Sbjct: 1  MNSALWVSKTGLSAMDKQLNVVANNLANVSTTAFKKDRAVF 41


>gi|52785608|ref|YP_091437.1| flagellar basal body rod protein FlgG [Bacillus licheniformis ATCC
           14580]
 gi|163119437|ref|YP_079022.2| flagellar basal body rod protein FlgG [Bacillus licheniformis ATCC
           14580]
 gi|319645990|ref|ZP_08000220.1| FlgE protein [Bacillus sp. BT1B_CT2]
 gi|52348110|gb|AAU40744.1| FlgE [Bacillus licheniformis ATCC 14580]
 gi|145902944|gb|AAU23384.2| flagellar hook protein [Bacillus licheniformis ATCC 14580]
 gi|317391740|gb|EFV72537.1| FlgE protein [Bacillus sp. BT1B_CT2]
          Length = 263

 Score = 56.8 bits (135), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 15/86 (17%), Positives = 34/86 (39%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
           T S    +  +G    ++        V     G      +  ++  NV++  E ++M   
Sbjct: 178 TFSNTSGLSKAGDNLYRETLSSGDPQVVVPGEGGSGKIQTSALEMSNVDLSEEFSEMIIA 237

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R + +N + I  S +++   ++L R
Sbjct: 238 QRGFQSNAKIITTSDEILQELVNLKR 263


>gi|183598619|ref|ZP_02960112.1| hypothetical protein PROSTU_02019 [Providencia stuartii ATCC 25827]
 gi|188020798|gb|EDU58838.1| hypothetical protein PROSTU_02019 [Providencia stuartii ATCC 25827]
          Length = 260

 Score = 56.8 bits (135), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 19/128 (14%), Positives = 39/128 (30%), Gaps = 3/128 (2%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           ++ +  I ++  ++  AR   +S                     T   +  +   G    
Sbjct: 136 IVPAITIPDNANSLTIARDGTVS---ITVYGDNQPQQIGQITLTTFINDAGLESMGENLY 192

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
            +     +                 +++  NVNV  E  +M +T R Y  N + +  S  
Sbjct: 193 METASSGAPNESAPGTNGAGLLYQHMLETSNVNVAEELVNMIQTQRAYEINSKAVSASDQ 252

Query: 124 MMTTTLDL 131
           M+     L
Sbjct: 253 MLQRLTQL 260



 Score = 39.9 bits (91), Expect = 0.13,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 20/41 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I S  IA +GL  Q   + +IS N+AN  T G       +
Sbjct: 1  MIRSLWIAKTGLDTQQTNLDVISNNLANVSTNGFKRQRAVF 41


>gi|157373205|ref|YP_001471805.1| flagellar basal-body rod protein FlgG [Shewanella sediminis
           HAW-EB3]
 gi|157315579|gb|ABV34677.1| flagellar basal-body rod protein FlgG [Shewanella sediminis
           HAW-EB3]
          Length = 261

 Score = 56.8 bits (135), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 22/128 (17%), Positives = 40/128 (31%), Gaps = 3/128 (2%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            L+ +  I    L +  A   I++   A      +            +    +   G   
Sbjct: 135 PLVPNIEIPEDALTITIATDGIVT---AQISGQAEAQELGQITLVNFTNPTGLEARGDNL 191

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
            ++ G   +                G ++  NVNV+ E  +M  T R Y  N + +  S 
Sbjct: 192 YRETGASGAAIEGVAGDQAIGQLRQGALEGANVNVVEEMVEMISTQRAYEMNAKVVSASD 251

Query: 123 DMMTTTLD 130
           DM+     
Sbjct: 252 DMLKFLNQ 259



 Score = 42.6 bits (98), Expect = 0.018,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 21/41 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          + ++  ++ +GL  Q  +M  I+ N+AN  TTG       +
Sbjct: 1  MQSALWVSKTGLTAQDVKMTTIANNLANVNTTGFKRDRVAF 41


>gi|95928662|ref|ZP_01311409.1| protein of unknown function DUF1078-like [Desulfuromonas
           acetoxidans DSM 684]
 gi|95135452|gb|EAT17104.1| protein of unknown function DUF1078-like [Desulfuromonas
           acetoxidans DSM 684]
          Length = 425

 Score = 56.8 bits (135), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 23/44 (52%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  NV++  E  DM      Y AN + I  + +M+   ++L+R
Sbjct: 382 LELSNVDLSQEFVDMITIQNGYSANSKVITTTDEMLQEVINLIR 425


>gi|255305280|ref|ZP_05349452.1| flagellar hook protein [Clostridium difficile ATCC 43255]
          Length = 331

 Score = 56.8 bits (135), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 25/47 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NV++  E  +M   +R + AN + I  S +++   ++L R
Sbjct: 285 QGAIEASNVDIAEEFTEMIIASRSFQANSKIISTSDEILQEIINLKR 331



 Score = 37.2 bits (84), Expect = 0.73,   Method: Composition-based stats.
 Identities = 10/33 (30%), Positives = 18/33 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          +I + +   SG+     ++ +I  N+ANA TT 
Sbjct: 1  MIKAMYSGVSGMKANQTKLDVIGNNVANAGTTS 33


>gi|222112272|ref|YP_002554536.1| flagellar basal body flae domain-containing protein [Acidovorax
           ebreus TPSY]
 gi|221731716|gb|ACM34536.1| flagellar basal body FlaE domain protein [Acidovorax ebreus TPSY]
          Length = 531

 Score = 56.8 bits (135), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 22/98 (22%), Positives = 39/98 (39%)

Query: 34  TTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
           + G T         +    + +   GG    +        +     G+  A  +G ++  
Sbjct: 433 SNGVTRAEGQIALASFRNTQGLAAVGGNNWVETYESGQPVLGAPTDGNFGALRAGALEDS 492

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           NV++  E  +M    R Y AN QTIK    +M+T ++L
Sbjct: 493 NVDLTAELVNMMTAQRAYQANAQTIKTQDQVMSTLVNL 530


>gi|289208114|ref|YP_003460180.1| fagellar hook-basal body protein [Thioalkalivibrio sp. K90mix]
 gi|288943745|gb|ADC71444.1| fagellar hook-basal body protein [Thioalkalivibrio sp. K90mix]
          Length = 408

 Score = 56.8 bits (135), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 12/60 (20%), Positives = 26/60 (43%)

Query: 72  TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
                   G+     +G ++  NV++  E  ++    R + AN QTI  +  +  T +++
Sbjct: 348 PVFASPGTGNLGEIQAGALEASNVDIAQELVNLITAQRNFQANAQTISTADQVTQTIINI 407


>gi|241203106|ref|YP_002974202.1| flagellar basal body rod protein FlgG [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240856996|gb|ACS54663.1| flagellar basal-body rod protein FlgG [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 262

 Score = 56.8 bits (135), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 12/78 (15%), Positives = 26/78 (33%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
              E  +   G    ++        +   D         G ++  NV+ + E  ++    
Sbjct: 178 FVNEAGLQPLGDNLFQETPASGEAVIGNPDEEGFAYMKQGYLESSNVDPVKEITELISAQ 237

Query: 109 RLYMANLQTIKQSHDMMT 126
           R Y  N + I  + +M +
Sbjct: 238 RAYEMNSKVITTADEMAS 255



 Score = 44.5 bits (103), Expect = 0.005,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 21/40 (52%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          + +  IA +G+  Q   +++I+ NIAN  TTG       +
Sbjct: 1  MRALAIAATGMDAQQTNLEVIANNIANINTTGFKRARAEF 40


>gi|260431748|ref|ZP_05785719.1| flagellar basal-body rod protein FlgG [Silicibacter
           lacuscaerulensis ITI-1157]
 gi|260415576|gb|EEX08835.1| flagellar basal-body rod protein FlgG [Silicibacter
           lacuscaerulensis ITI-1157]
          Length = 261

 Score = 56.8 bits (135), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 19/115 (16%), Positives = 36/115 (31%)

Query: 16  AVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVE 75
             +S  +    E  A    T +      +   + S  + +   G    K+     +  V 
Sbjct: 145 DARSISINAAGEVYAYFDDTAEGQLLGEFTLASFSNAKGLEAIGSNLFKETEASGAPIVG 204

Query: 76  EFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
                       G ++  +V+ + E  ++ E  R Y  N + I     MM  T  
Sbjct: 205 TPGEDGLGTLRQGYLEDSSVDAVREVTELIEAQRGYEMNAKVISAVDQMMGATTQ 259



 Score = 45.6 bits (106), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 22/49 (44%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE 53
          + +  IA +G++ Q  R++ IS N+AN  TTG       +         
Sbjct: 1  MRALKIAATGMSAQQMRVETISNNLANMNTTGYNARRAEFADLHYQQMA 49


>gi|220930463|ref|YP_002507372.1| hypothetical protein Ccel_3100 [Clostridium cellulolyticum H10]
 gi|220000791|gb|ACL77392.1| protein of unknown function DUF1078 domain protein [Clostridium
           cellulolyticum H10]
          Length = 270

 Score = 56.8 bits (135), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 16/97 (16%), Positives = 27/97 (27%)

Query: 37  DTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVN 96
             P            +  +   G                  D         G ++  NV 
Sbjct: 174 SVPMDQTIGMVIFPNKYALEAVGNNLYSSNSATGEPVQVSEDENAKSIMKQGFLESSNVQ 233

Query: 97  VLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           V+ E   +    R Y  + + I+ S DM+    +L R
Sbjct: 234 VVDEMVKLIVAQRAYEVSSKAIQSSDDMLQIANNLRR 270



 Score = 42.9 bits (99), Expect = 0.013,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 22/42 (52%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ + + A SG+  Q   + +IS N+AN  TTG       ++
Sbjct: 1  MMRALYTAGSGMKAQQFNVDVISNNLANVNTTGYKKERAEFK 42


>gi|253573527|ref|ZP_04850870.1| flagellar basal body rod protein FlgG [Paenibacillus sp. oral taxon
           786 str. D14]
 gi|251847055|gb|EES75060.1| flagellar basal body rod protein FlgG [Paenibacillus sp. oral taxon
           786 str. D14]
          Length = 274

 Score = 56.8 bits (135), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 17/106 (16%), Positives = 39/106 (36%), Gaps = 5/106 (4%)

Query: 33  RTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEF-DPGHPVANASGI-- 89
              G T   +      ++  E +   GG   +      +     + +P +       +  
Sbjct: 169 NPEGGTDPGEIIGVARVTNPEGLEKIGGNLYRVTLNAIADGELTYTNPNNAEEGTGALIV 228

Query: 90  --VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             ++  NV++  E  +M    R + AN + I  S +++   ++L R
Sbjct: 229 GQLEMSNVDLTGEFTEMIVAQRGFQANSRIITTSDEVLQEVVNLKR 274



 Score = 37.9 bits (86), Expect = 0.47,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 18/38 (47%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGS 41
          ++ S +   SG+     ++ +I  NIAN  T G   G 
Sbjct: 1  MLRSMYSGVSGMRGFQTKLDVIGNNIANVNTVGFKSGR 38


>gi|126176154|ref|YP_001052303.1| flagellar basal-body rod protein FlgG [Shewanella baltica OS155]
 gi|304412506|ref|ZP_07394112.1| flagellar basal-body rod protein FlgG [Shewanella baltica OS183]
 gi|307307165|ref|ZP_07586903.1| flagellar basal-body rod protein FlgG [Shewanella baltica BA175]
 gi|125999359|gb|ABN63434.1| flagellar basal-body rod protein FlgG [Shewanella baltica OS155]
 gi|304349148|gb|EFM13560.1| flagellar basal-body rod protein FlgG [Shewanella baltica OS183]
 gi|306910404|gb|EFN40835.1| flagellar basal-body rod protein FlgG [Shewanella baltica BA175]
          Length = 261

 Score = 56.8 bits (135), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 22/128 (17%), Positives = 40/128 (31%), Gaps = 3/128 (2%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            L+ +  I    L V  A   +++  +A      +            +    +   G   
Sbjct: 135 PLVPNIVIPEDALTVTIANDGVVTAKMA---GEAEPQDLGQITLVNFTNPAGLEARGDNL 191

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
            ++                  A   G ++  NVNV+ E  +M  T R Y  N + +  S 
Sbjct: 192 YRETAASGVAVEGVAGDQALGALRQGALEGANVNVVEEMVEMISTQRAYEMNAKVVSASD 251

Query: 123 DMMTTTLD 130
           DM+     
Sbjct: 252 DMLKFLNQ 259



 Score = 41.0 bits (94), Expect = 0.051,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 21/41 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          + ++  ++ +GL  Q  +M  I+ N+AN  TTG       +
Sbjct: 1  MQSALWVSKTGLTAQDTKMTAIANNLANVNTTGFKRDRVAF 41


>gi|57505769|ref|ZP_00371695.1| flagellar basal-body rod protein (flgG) [Campylobacter upsaliensis
           RM3195]
 gi|57016042|gb|EAL52830.1| flagellar basal-body rod protein (flgG) [Campylobacter upsaliensis
           RM3195]
          Length = 545

 Score = 56.8 bits (135), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 27/48 (56%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             G ++  NVN+ +E +++  T R + A+ ++I  S  M+   +++ +
Sbjct: 498 KGGFLEQSNVNLSMELSNLIVTQRAFDASSKSITTSDQMIQKAINMKK 545


>gi|323139654|ref|ZP_08074696.1| flagellar basal-body rod protein FlgG [Methylocystis sp. ATCC
           49242]
 gi|322395086|gb|EFX97645.1| flagellar basal-body rod protein FlgG [Methylocystis sp. ATCC
           49242]
          Length = 262

 Score = 56.8 bits (135), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 21/124 (16%), Positives = 40/124 (32%), Gaps = 3/124 (2%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           L  +  I N+ L V  ++  I+S   A                   + E  +   GG   
Sbjct: 136 LTPTITIPNNTLNVSVSQSGIVS---AIVAGQTQPQQIGQLTVANFANESGLEALGGNLF 192

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
           ++        V             G ++  NV+ + E   +    R +  N + I+ + +
Sbjct: 193 RETYASGQPIVGIPGDPGFGVINQGYLESSNVDPVKELVSLISAQRAFELNSKVIQAADE 252

Query: 124 MMTT 127
           M  T
Sbjct: 253 MAGT 256



 Score = 42.6 bits (98), Expect = 0.018,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 27/64 (42%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          + +  IA +G++ Q   +++I+ NIAN  TTG       +       + +   S   R  
Sbjct: 1  MRALAIAATGMSAQQQNIEVIAHNIANINTTGFKRSRAEFTDLLYQTDRLQGVSNRGRDA 60

Query: 65 KIGV 68
           +  
Sbjct: 61 TVPQ 64


>gi|116250482|ref|YP_766320.1| flagellar basal body rod protein FlgG [Rhizobium leguminosarum bv.
           viciae 3841]
 gi|115255130|emb|CAK06204.1| flgG [Rhizobium leguminosarum bv. viciae 3841]
          Length = 262

 Score = 56.8 bits (135), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 12/78 (15%), Positives = 26/78 (33%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
              E  +   G    ++        +   D         G ++  NV+ + E  ++    
Sbjct: 178 FVNEAGLQPLGDNLFQETPASGEAVIGNPDEEGFAYMKQGYLESSNVDPVKEITELISAQ 237

Query: 109 RLYMANLQTIKQSHDMMT 126
           R Y  N + I  + +M +
Sbjct: 238 RAYEMNSKVITTADEMAS 255



 Score = 44.5 bits (103), Expect = 0.005,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 21/40 (52%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          + +  IA +G+  Q   +++I+ NIAN  TTG       +
Sbjct: 1  MRALAIAATGMDAQQTNLEVIANNIANINTTGFKRARAEF 40


>gi|224436692|ref|ZP_03657696.1| flagellar hook-associated protein FlgK [Helicobacter cinaedi CCUG
           18818]
 gi|313143190|ref|ZP_07805383.1| flagellar hook-protein FlgK [Helicobacter cinaedi CCUG 18818]
 gi|313128221|gb|EFR45838.1| flagellar hook-protein FlgK [Helicobacter cinaedi CCUG 18818]
          Length = 606

 Score = 56.8 bits (135), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 15/107 (14%), Positives = 31/107 (28%), Gaps = 2/107 (1%)

Query: 29  IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHP--VANA 86
           +AN          D Y  K    +  +         ++           +       A  
Sbjct: 500 VANMMQQLQYDDVDFYVNKYEKKQMRIPEYFQFLAGRVANQTEAAQRTKETKDSVLSAVK 559

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
              +    V++  E  ++ +    Y AN + I     M+ T L + +
Sbjct: 560 KEHLAISQVSLDEEMVNLIKFQGGYAANAKVITTIDRMIETLLGIKQ 606



 Score = 44.5 bits (103), Expect = 0.006,   Method: Composition-based stats.
 Identities = 15/74 (20%), Positives = 30/74 (40%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  +++S + + +GL      + +   NI+NA     +      R +   + +  +   G
Sbjct: 1  MGGILSSLNTSYTGLQAHQLMVDVTGNNISNASDEFYSRQRVLVRPEKPLYFQDYNLGRG 60

Query: 61 VRVKKIGVDQSTFV 74
          V V+ I      FV
Sbjct: 61 VSVETIQRIHDEFV 74


>gi|315926654|gb|EFV06034.1| flagellar hook protein FlgE [Campylobacter jejuni subsp. jejuni
           DFVF1099]
          Length = 594

 Score = 56.8 bits (135), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/106 (21%), Positives = 39/106 (36%)

Query: 28  NIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANAS 87
           NI    T G T         +++    +   GG   K      +  V E   G      +
Sbjct: 489 NILGEFTNGKTFAVAKMAMASVANNSGLEEIGGNLFKVTANSGAIVVGEAGTGGRGEMKT 548

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             ++  NV++     ++    R Y AN +TI  S  M+ T + L +
Sbjct: 549 SALEMSNVDLSRSLTELIIIQRGYQANSKTISTSDQMLQTLIQLKQ 594


>gi|209547928|ref|YP_002279845.1| flagellar basal body rod protein FlgG [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209533684|gb|ACI53619.1| flagellar basal-body rod protein FlgG [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 262

 Score = 56.8 bits (135), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 26/78 (33%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
              E  +   G    ++        V   D         G ++  NV+ + E  ++    
Sbjct: 178 FVNEAGLQPLGDNLFQETAASGEAVVGNPDEEGFAYMKQGYLESSNVDPVKEITELISAQ 237

Query: 109 RLYMANLQTIKQSHDMMT 126
           R Y  N + I  + +M +
Sbjct: 238 RAYEMNSKVITTADEMAS 255



 Score = 44.1 bits (102), Expect = 0.006,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 21/40 (52%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          + +  IA +G+  Q   +++I+ NIAN  TTG       +
Sbjct: 1  MRALAIAATGMDAQQTNLEVIANNIANINTTGFKRARAEF 40


>gi|241589578|ref|YP_002979603.1| flagellar basal-body rod protein FlgG [Ralstonia pickettii 12D]
 gi|240868290|gb|ACS65949.1| flagellar basal-body rod protein FlgG [Ralstonia pickettii 12D]
          Length = 261

 Score = 56.8 bits (135), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 13/99 (13%), Positives = 28/99 (28%)

Query: 34  TTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
              +      ++         +   G     +        +               V+  
Sbjct: 163 GMVNRTQVGAFQLANFVNPAGLRSLGENLYAETEASGGANLAVPGGNGLGMLHQNYVETS 222

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           NVNV+ E   + +T R Y  N + ++ +  M+     L 
Sbjct: 223 NVNVVEEMIQLIQTQRAYEINSKAVQTADRMLEKIAQLK 261



 Score = 42.2 bits (97), Expect = 0.022,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 22/41 (53%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I S  I+ +G+  Q  ++ ++S N+AN  TTG       +
Sbjct: 1  MIRSLWISKTGMEAQQTQLDVVSNNLANVNTTGFKRSRAVF 41


>gi|121596117|ref|YP_988013.1| hypothetical protein Ajs_3830 [Acidovorax sp. JS42]
 gi|120608197|gb|ABM43937.1| protein of unknown function DUF1078 domain protein [Acidovorax sp.
           JS42]
          Length = 538

 Score = 56.8 bits (135), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 22/98 (22%), Positives = 39/98 (39%)

Query: 34  TTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
           + G T         +    + +   GG    +        +     G+  A  +G ++  
Sbjct: 440 SNGVTRAEGQVALASFRNTQGLAAVGGNNWVETYESGQPVMGAPTDGNFGALRAGALEDS 499

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           NV++  E  +M    R Y AN QTIK    +M+T ++L
Sbjct: 500 NVDLTAELVNMMTAQRAYQANAQTIKTQDQVMSTLVNL 537


>gi|168334552|ref|ZP_02692708.1| hypothetical protein Epulo_06138 [Epulopiscium sp. 'N.t. morphotype
           B']
          Length = 473

 Score = 56.8 bits (135), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 14/44 (31%), Positives = 25/44 (56%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  NV++  E  +M  T R Y A+ +TI  S +M+   ++L R
Sbjct: 430 LEMSNVDLSKEFTEMITTQRGYQASSKTITTSDEMLQELINLKR 473



 Score = 38.3 bits (87), Expect = 0.40,   Method: Composition-based stats.
 Identities = 20/90 (22%), Positives = 32/90 (35%), Gaps = 6/90 (6%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG------DTPGSDPYRRKTISFEEVMHG 57
          ++ S     SGL     +M +I  NIAN  T G                ++ +    M G
Sbjct: 1  MMRSLFSGVSGLQSHQLKMDVIGNNIANVNTIGFKSQRVTFADVYYQTTQSATTANEMTG 60

Query: 58 SGGVRVKKIGVDQSTFVEEFDPGHPVANAS 87
           GG+   +IG+  S    +       A  +
Sbjct: 61 LGGMNAMQIGLGTSVSSIDMLMTPGSAQRT 90


>gi|239906013|ref|YP_002952752.1| flagellar hook protein FlgE [Desulfovibrio magneticus RS-1]
 gi|239795877|dbj|BAH74866.1| flagellar hook protein FlgE [Desulfovibrio magneticus RS-1]
          Length = 550

 Score = 56.8 bits (135), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 15/85 (17%), Positives = 30/85 (35%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +  + +   G                  + G   + +   ++  NV++  E   M  T 
Sbjct: 466 FTNLQGLSRQGSNLYAATLDSGQGTTNRANTGSVGSISGNTLETSNVDLATEMVSMILTQ 525

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R + AN +TI     M++  + L R
Sbjct: 526 RGFEANSKTITTVDSMLSEVIQLKR 550



 Score = 39.1 bits (89), Expect = 0.21,   Method: Composition-based stats.
 Identities = 22/86 (25%), Positives = 27/86 (31%), Gaps = 4/86 (4%)

Query: 3  YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY----RRKTISFEEVMHGS 58
           L  S     SGL   S +M  I  N+AN  T G       +         +   V    
Sbjct: 4  GLGTSMWSGVSGLLANSTKMGTIGNNLANVNTYGFKGARTDFMDLMSANVGTAAGVKQIG 63

Query: 59 GGVRVKKIGVDQSTFVEEFDPGHPVA 84
           GVRV  I  D S    E    +   
Sbjct: 64 RGVRVGTIVSDYSQGGLETTSENLDM 89


>gi|298529920|ref|ZP_07017322.1| flagellar hook-associated protein FlgK [Desulfonatronospira
           thiodismutans ASO3-1]
 gi|298509294|gb|EFI33198.1| flagellar hook-associated protein FlgK [Desulfonatronospira
           thiodismutans ASO3-1]
          Length = 701

 Score = 56.8 bits (135), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 17/110 (15%), Positives = 37/110 (33%), Gaps = 2/110 (1%)

Query: 23  QIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHP 82
              ++NIA  +       +      + + +E  +   G          + F  +++    
Sbjct: 593 NTTAKNIAELQDRKVDITTSFEGTTSQTIQEYYNSLSGNVGSD--TSMTKFNADYNKSLT 650

Query: 83  VANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
                   +   VN+  E +++ +    Y A  + I  +  MM T L L 
Sbjct: 651 DDLDRRQQEKSGVNLDEEMSNLIKYQHSYQAAARMISTADQMMQTLLGLK 700



 Score = 34.1 bits (76), Expect = 6.1,   Method: Composition-based stats.
 Identities = 13/66 (19%), Positives = 20/66 (30%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  + A  +   + L    + +Q    NIAN  T G                       G
Sbjct: 1  MSGIHALMNSGRTALFANQSAIQTTGNNIANVNTEGYRRREVRLEEAMALDTAPGQIGTG 60

Query: 61 VRVKKI 66
          V  K++
Sbjct: 61 VNAKEV 66


>gi|312884832|ref|ZP_07744524.1| flagellar basal body rod protein FlgG [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309367484|gb|EFP95044.1| flagellar basal body rod protein FlgG [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 261

 Score = 56.8 bits (135), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 21/123 (17%), Positives = 37/123 (30%), Gaps = 3/123 (2%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            L     I +  L++       ++   A    T    G     R        +   GG  
Sbjct: 135 PLEPQIQIPDDALSISVGVDGTVTTTSA-IDPTPQQVGQITLAR--FINPAGLEAVGGNL 191

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
            ++                  +     ++  NV V+ E  DM  T R Y  N + +  + 
Sbjct: 192 FRQTEASGLAEELIASEDGVGSIKQRALEGSNVQVVEEMVDMITTQRAYEMNAKVVSAAD 251

Query: 123 DMM 125
           DM+
Sbjct: 252 DML 254



 Score = 41.0 bits (94), Expect = 0.051,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 28/68 (41%), Gaps = 4/68 (5%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          + ++  ++ +G+A Q  +M  IS N+AN  T G       +          +    G +V
Sbjct: 1  MHSALWVSKTGMAAQDTKMTAISNNLANVNTVGFKRDRVVF----EDLFYTIQRQPGAQV 56

Query: 64 KKIGVDQS 71
           ++    S
Sbjct: 57 DEVNELPS 64


>gi|254439743|ref|ZP_05053237.1| conserved domain protein [Octadecabacter antarcticus 307]
 gi|198255189|gb|EDY79503.1| conserved domain protein [Octadecabacter antarcticus 307]
          Length = 1412

 Score = 56.8 bits (135), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 12/83 (14%), Positives = 32/83 (38%)

Query: 49   ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
             + +  +   G     +        + E       +  SG ++  NV++  E  ++    
Sbjct: 1328 FNNQNGLKQVGNATFVETASSGEPIIGEAGTEGFGSIQSGALERSNVDITEELVNLITAQ 1387

Query: 109  RLYMANLQTIKQSHDMMTTTLDL 131
            R + A+ + I+ S  +  T +++
Sbjct: 1388 RNFQASSKAIETSTQLTQTIINI 1410


>gi|90418392|ref|ZP_01226304.1| basal body rod protein flgG [Aurantimonas manganoxydans SI85-9A1]
 gi|90338064|gb|EAS51715.1| basal body rod protein flgG [Aurantimonas manganoxydans SI85-9A1]
          Length = 262

 Score = 56.8 bits (135), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 12/79 (15%), Positives = 28/79 (35%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
           T +    +   GG   ++     +                G ++  NV+ + E +++   
Sbjct: 177 TFANNAGLAAQGGNLFRETIASGAPTAGVPGDEGYATLQQGYLEDSNVDPVKEISELISA 236

Query: 108 NRLYMANLQTIKQSHDMMT 126
            R Y  N + I  + +M +
Sbjct: 237 QRAYEMNSKVISAADEMAS 255



 Score = 44.1 bits (102), Expect = 0.007,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 21/40 (52%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          + +  IA +G+  Q   +++I+ NIAN  TTG       +
Sbjct: 1  MRALAIAATGMNAQQTNVEVIANNIANINTTGFKRARAEF 40


>gi|220904530|ref|YP_002479842.1| hypothetical protein Ddes_1261 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|219868829|gb|ACL49164.1| protein of unknown function DUF1078 domain protein [Desulfovibrio
           desulfuricans subsp. desulfuricans str. ATCC 27774]
          Length = 808

 Score = 56.8 bits (135), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 14/92 (15%), Positives = 25/92 (27%), Gaps = 1/92 (1%)

Query: 43  PYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGI-VKYPNVNVLVET 101
                            G  +     D           +         ++  NV++  E 
Sbjct: 717 YQIALYDFQNHQGLYREGGNLFSATNDSGEPQLGVAGDNGFGKTKAYNIEQSNVDMTTEF 776

Query: 102 ADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             M  T R + AN + I     M+ T + + R
Sbjct: 777 VQMISTQRGFQANSKGITTVDTMLETVIGMKR 808



 Score = 39.5 bits (90), Expect = 0.17,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 27/81 (33%), Gaps = 4/81 (4%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPG----SDPYRRKTISFEEVMHG 57
            L AS   + SGL     +M ++  NIAN  T G        +D   R   +       
Sbjct: 1  MGLSASMWTSVSGLLSHGQKMNVVGNNIANVSTLGFKSQRMDFNDYLYRGIGTTSGPSQI 60

Query: 58 SGGVRVKKIGVDQSTFVEEFD 78
            G  V  I  D S    E  
Sbjct: 61 GAGASVYAILGDFSQGSLEST 81


>gi|225569971|ref|ZP_03778996.1| hypothetical protein CLOHYLEM_06066 [Clostridium hylemonae DSM
           15053]
 gi|225161441|gb|EEG74060.1| hypothetical protein CLOHYLEM_06066 [Clostridium hylemonae DSM
           15053]
          Length = 294

 Score = 56.8 bits (135), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 24/47 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           S  ++  NV +  + A M  T R Y AN + I  + +M+   +++ R
Sbjct: 248 SNYLEMSNVELASDMASMITTQRGYQANSKIITVTDEMLEQLVNMKR 294



 Score = 34.5 bits (77), Expect = 5.3,   Method: Composition-based stats.
 Identities = 14/42 (33%), Positives = 23/42 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S + A +GL    ++M +IS NIAN  T G    S  ++
Sbjct: 1  MVKSMYAAIAGLRSHQSKMDVISNNIANVNTWGYKSRSANFQ 42


>gi|167750722|ref|ZP_02422849.1| hypothetical protein EUBSIR_01700 [Eubacterium siraeum DSM 15702]
 gi|167656401|gb|EDS00531.1| hypothetical protein EUBSIR_01700 [Eubacterium siraeum DSM 15702]
          Length = 521

 Score = 56.8 bits (135), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 19/86 (22%), Positives = 33/86 (38%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
           T      +   G    ++        V         +  SG ++  NV++  E +DM  T
Sbjct: 436 TFDNPNGLEQVGSSYWRETLSSGQPQVNIAGENGSASVVSGALEMSNVDLSQEFSDMIIT 495

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R + AN + I  S  M+   ++L R
Sbjct: 496 QRGFQANSRIITTSDTMLEEIVNLKR 521



 Score = 39.5 bits (90), Expect = 0.15,   Method: Composition-based stats.
 Identities = 19/71 (26%), Positives = 29/71 (40%), Gaps = 4/71 (5%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGD----TPGSDPYRRKTISFEEVMHGSG 59
          ++ S     SGL     +M +I  NIAN  TTG     T   + Y +   +     +  G
Sbjct: 1  MVRSLFSGVSGLKTHQQKMDVIGNNIANVNTTGFKTSVTTFQEVYYQTKKNGSAGSNLQG 60

Query: 60 GVRVKKIGVDQ 70
          GV   ++G   
Sbjct: 61 GVNPSQVGYGT 71


>gi|295696121|ref|YP_003589359.1| fagellar hook-basal body protein [Bacillus tusciae DSM 2912]
 gi|295411723|gb|ADG06215.1| fagellar hook-basal body protein [Bacillus tusciae DSM 2912]
          Length = 265

 Score = 56.8 bits (135), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 20/100 (20%), Positives = 38/100 (38%)

Query: 34  TTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
             G T  +        +  E +   G     +     +  V+  + G   +  SG ++  
Sbjct: 166 DDGTTQTAAQIGLANFANPEGLQKIGNNLFVETTNSGTADVQAPNQGVFGSITSGALEMS 225

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           NV++  E  +M    R + AN +TI     M+   ++L R
Sbjct: 226 NVDLTNEFTEMIIAQRAFQANARTITSDDQMLQEVVNLKR 265



 Score = 37.2 bits (84), Expect = 0.85,   Method: Composition-based stats.
 Identities = 19/90 (21%), Positives = 30/90 (33%), Gaps = 3/90 (3%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR---RKTISFEEVMHGSGG 60
          ++ S + A SG+     +M +I  NIAN  T G       +     +T+S       + G
Sbjct: 1  MMRSLYSAVSGMRGFQTKMDVIGNNIANVNTVGFKASRVMFHDLISQTLSGATAPGDTTG 60

Query: 61 VRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
              +             P  P A     V
Sbjct: 61 GSNPQQVGLGVGLASIDTPMTPGAPMMTGV 90


>gi|218133669|ref|ZP_03462473.1| hypothetical protein BACPEC_01538 [Bacteroides pectinophilus ATCC
           43243]
 gi|217991044|gb|EEC57050.1| hypothetical protein BACPEC_01538 [Bacteroides pectinophilus ATCC
           43243]
          Length = 420

 Score = 56.8 bits (135), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 28/62 (45%)

Query: 72  TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             V E       +  SG ++  NV++  E  DM  T R + AN + I  S  M+   ++L
Sbjct: 359 DGVGEDITSAGGSMVSGTIEMSNVDLASEFTDMITTQRGFQANSRIITVSDTMLEELINL 418

Query: 132 LR 133
            R
Sbjct: 419 KR 420


>gi|212637787|ref|YP_002314312.1| flagellar basal body rod protein [Shewanella piezotolerans WP3]
 gi|212559271|gb|ACJ31725.1| Flagellar basal body rod protein [Shewanella piezotolerans WP3]
          Length = 261

 Score = 56.8 bits (135), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 41/128 (32%), Gaps = 3/128 (2%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            L+ +  I    L +  A   I+S  +A      D            +    +   G   
Sbjct: 135 PLVPNIEIPEEALTITIATDGIVSAQMA---GQADAQELGQITLVNFTNPAGLEARGNNL 191

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
            ++ G   +                G ++  NVNV+ E  +M  T R Y  N + +  S 
Sbjct: 192 YRETGASGAAIEGVAGDQALGQIRQGALEGANVNVVEEMVEMISTQRAYEMNAKVVSASD 251

Query: 123 DMMTTTLD 130
           DM+     
Sbjct: 252 DMLKFLNQ 259



 Score = 42.2 bits (97), Expect = 0.024,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 21/41 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          + ++  ++ +GL  Q  +M  I+ N+AN  TTG       +
Sbjct: 1  MQSALWVSKTGLTAQDTKMTTIANNLANVNTTGFKRDRVAF 41


>gi|149203125|ref|ZP_01880096.1| flagellar basal-body rod protein FlgG [Roseovarius sp. TM1035]
 gi|149143671|gb|EDM31707.1| flagellar basal-body rod protein FlgG [Roseovarius sp. TM1035]
          Length = 261

 Score = 56.8 bits (135), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 13/82 (15%), Positives = 28/82 (34%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +  + +   GG    +        V             G ++  +V+ + E  ++ E  
Sbjct: 178 FTNPKGLEAIGGNLFVETEASGPANVTTAGQDGLGTLRQGYLEDSSVDPVREITELIEAQ 237

Query: 109 RLYMANLQTIKQSHDMMTTTLD 130
           R Y  N + I  +  M++ T  
Sbjct: 238 RGYELNAKVITAADQMLSATTQ 259



 Score = 43.3 bits (100), Expect = 0.012,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 21/41 (51%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          +    IA +G+A Q  R++ IS N+AN  TTG       + 
Sbjct: 1  MHILKIAATGMAAQQMRVETISNNLANMSTTGYNARRAEFA 41


>gi|217077695|ref|YP_002335413.1| flagellar hook protein FlgE [Thermosipho africanus TCF52B]
 gi|217037550|gb|ACJ76072.1| flagellar hook protein FlgE [Thermosipho africanus TCF52B]
          Length = 704

 Score = 56.8 bits (135), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 40/111 (36%), Gaps = 2/111 (1%)

Query: 25  ISEN--IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHP 82
           I+EN  I    + G T           +    +  +G     +        + +   G  
Sbjct: 594 IAENGDIIGTFSNGLTDKLGKVALAIFNNPAGLLEAGNSLYTESANSGGAIIRQPGFGGS 653

Query: 83  VANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            +  SG ++  NV++  E   +    R + AN + +  +  ++   ++L R
Sbjct: 654 GSLISGALEMSNVDLSEEFTKLIIAQRGFQANARVVTTADQILQEVVNLRR 704


>gi|163856435|ref|YP_001630733.1| hypothetical protein Bpet2124 [Bordetella petrii DSM 12804]
 gi|163260163|emb|CAP42465.1| flgE [Bordetella petrii]
          Length = 413

 Score = 56.8 bits (135), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 19/98 (19%), Positives = 35/98 (35%)

Query: 34  TTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
           T G+T           +  + +   G     + G      + +             V+  
Sbjct: 315 TNGETAIIGTLALANFNNVQGLQPVGNNAWAETGASGQPTLGQPGTNGLATVVGQAVEAS 374

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           NV++  E  +M    R Y AN QTIK   ++M   +++
Sbjct: 375 NVDMSKELVNMIVAQRTYQANAQTIKTQDEVMQVLMNM 412


>gi|115523556|ref|YP_780467.1| flagellar basal body rod protein FlgG [Rhodopseudomonas palustris
           BisA53]
 gi|115517503|gb|ABJ05487.1| flagellar basal-body rod protein FlgG [Rhodopseudomonas palustris
           BisA53]
          Length = 262

 Score = 56.8 bits (135), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 21/134 (15%), Positives = 43/134 (32%), Gaps = 7/134 (5%)

Query: 2   DYLIASAHI--ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
           + L  +  I   +SGL + +     +   IA   TT    G           +  +   G
Sbjct: 134 NPLQPTITIPQGSSGLTINAQGQVTV---IAQGSTTATLLGQ--IGLTRFINKTGLQPIG 188

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
                +            +           ++  NV  + E +D+    R Y  N + + 
Sbjct: 189 DNLFTETPASGPPQDGTANADGYGDIQQQTLEQANVEAVTEISDLISAQRAYEMNAKVVS 248

Query: 120 QSHDMMTTTLDLLR 133
            +  M+ +T ++ R
Sbjct: 249 AADQMLQSTSNMFR 262



 Score = 36.8 bits (83), Expect = 1.0,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 22/41 (53%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          + + + A +G+  Q   +Q+IS NIAN RTT        ++
Sbjct: 1  MRALYTAATGMMAQELNVQVISNNIANMRTTAFKKQRAAFQ 41


>gi|149183418|ref|ZP_01861851.1| flagellar basal-body rod protein [Bacillus sp. SG-1]
 gi|148848863|gb|EDL63080.1| flagellar basal-body rod protein [Bacillus sp. SG-1]
          Length = 280

 Score = 56.8 bits (135), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 22/129 (17%), Positives = 42/129 (32%), Gaps = 5/129 (3%)

Query: 10  IANSGL---AVQSARMQIISENIANA-RTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
            + SGL     +  R+Q+ S+N   A          +  R  T         +       
Sbjct: 149 TSASGLYVLDTEGQRIQLPSDNFKIAEDGRILVDEVETGRLGTGFTVNANRLAKEGDGLF 208

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
              D     + ++ G       G ++  NV+      DM    R + AN + ++     M
Sbjct: 209 RTEDNEPLADAYNSGATFNMQQGFIERSNVDTARTMTDMMTAYRAFEANQKILQAYDRSM 268

Query: 126 TTTLD-LLR 133
              ++ + R
Sbjct: 269 EKAVNEIGR 277


>gi|325274797|ref|ZP_08140825.1| flagellar basal body rod protein FlgG [Pseudomonas sp. TJI-51]
 gi|324100065|gb|EGB97883.1| flagellar basal body rod protein FlgG [Pseudomonas sp. TJI-51]
          Length = 261

 Score = 56.8 bits (135), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 12/78 (15%), Positives = 24/78 (30%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +   G     +     +  V               ++  NV+ + E  +M  T 
Sbjct: 178 FINPAGLQAIGDNLFLETAASGAPQVGTPGLNGFGTTQQQTLENSNVSTVEELVNMITTQ 237

Query: 109 RLYMANLQTIKQSHDMMT 126
           R Y  N + I  +  M++
Sbjct: 238 RAYEMNSKVISTADQMLS 255



 Score = 41.4 bits (95), Expect = 0.044,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 22/42 (52%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ +  +A +GL+ Q   + +IS N+AN  TTG       + 
Sbjct: 1  MLPALWVAKTGLSAQDTNLTVISNNLANVSTTGFKRDRAEFA 42


>gi|262276415|ref|ZP_06054224.1| flagellar basal-body rod protein FlgG [Grimontia hollisae CIP
           101886]
 gi|262220223|gb|EEY71539.1| flagellar basal-body rod protein FlgG [Grimontia hollisae CIP
           101886]
          Length = 262

 Score = 56.4 bits (134), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 24/72 (33%)

Query: 55  MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
           +   G       G                +    +++  NVNV  E  +M E  R+Y  N
Sbjct: 185 LEPIGQNLYLPTGASGDPQEGVPGLDGLGSVRQSMLETSNVNVTEELVNMIEAQRVYEMN 244

Query: 115 LQTIKQSHDMMT 126
            + I     M++
Sbjct: 245 SKVISSVDQMLS 256



 Score = 41.0 bits (94), Expect = 0.052,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 19/41 (46%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  +  ++ +GL  Q   +  IS N+ANA T G       +
Sbjct: 1  MHPALWVSKTGLDAQQTNISTISNNLANASTVGFKKSRAVF 41


>gi|157147100|ref|YP_001454419.1| flagellar basal body rod protein FlgG [Citrobacter koseri ATCC
           BAA-895]
 gi|157084305|gb|ABV13983.1| hypothetical protein CKO_02877 [Citrobacter koseri ATCC BAA-895]
          Length = 261

 Score = 56.4 bits (134), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 24/77 (31%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +   GG   ++                      G ++  NV V+ E  DM    
Sbjct: 178 FVNPAGLEAIGGNLYRETAASGEAVEGVPGEDALGQLEQGSLEGSNVQVVEEMVDMITVQ 237

Query: 109 RLYMANLQTIKQSHDMM 125
           R Y  N + +  + DM+
Sbjct: 238 RAYEMNAKMVSAADDML 254



 Score = 41.0 bits (94), Expect = 0.059,   Method: Composition-based stats.
 Identities = 15/39 (38%), Positives = 21/39 (53%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSD 42
          +  +  I+ +GLA Q A+M  IS N+AN  TTG      
Sbjct: 1  MNPALWISKTGLAAQDAKMTAISNNLANVNTTGFKRDRA 39


>gi|120613059|ref|YP_972737.1| hypothetical protein Aave_4423 [Acidovorax citrulli AAC00-1]
 gi|120591523|gb|ABM34963.1| protein of unknown function DUF1078 domain protein [Acidovorax
           citrulli AAC00-1]
          Length = 425

 Score = 56.4 bits (134), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/129 (20%), Positives = 43/129 (33%), Gaps = 2/129 (1%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
            A ++++  G          I  N        +       +    SF      +      
Sbjct: 296 FAVSNLSQDGYTAGELTGISIENNGTVMTRYSNGVTRAEGQVALASFRNTQGLASVGNNN 355

Query: 65  KIGVDQSTFVEEFDPGHPV--ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
            +   QS       P         SG ++  NV++  E  +M    R Y AN QTIK   
Sbjct: 356 WVETFQSGQPVLGTPTEGKFGGLRSGALEDSNVDLTAELVNMMTAQRAYQANAQTIKTQD 415

Query: 123 DMMTTTLDL 131
            +M+T ++L
Sbjct: 416 QVMSTLVNL 424


>gi|288962678|ref|YP_003452972.1| flagellar basal-body rod protein [Azospirillum sp. B510]
 gi|288914944|dbj|BAI76428.1| flagellar basal-body rod protein [Azospirillum sp. B510]
          Length = 261

 Score = 56.4 bits (134), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 15/110 (13%), Positives = 29/110 (26%)

Query: 22  MQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGH 81
           +    E +A                     E  +   G    +                 
Sbjct: 151 INRSGEVLAYVDGKTQPVNQGQLAMTVFVNESGLEALGDNLFRATPASGEPQEGLAGQAG 210

Query: 82  PVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
                   ++  NVNV+ E  ++    R Y  N + I+    M +T  ++
Sbjct: 211 FGTIRQKYLESSNVNVVQEITELISAQRAYEMNAKVIEAGDQMASTMTNM 260



 Score = 39.9 bits (91), Expect = 0.13,   Method: Composition-based stats.
 Identities = 13/62 (20%), Positives = 24/62 (38%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          +    IA++G+  Q   +++IS NIAN  TT        ++      E+           
Sbjct: 1  MRVLSIASTGMMAQQLNVEVISNNIANINTTAYKRSRAEFQDLMYQAEKRQGSQSTDSGT 60

Query: 65 KI 66
           +
Sbjct: 61 IV 62


>gi|167034941|ref|YP_001670172.1| flagellar basal body rod protein FlgG [Pseudomonas putida GB-1]
 gi|166861429|gb|ABY99836.1| flagellar basal-body rod protein FlgG [Pseudomonas putida GB-1]
          Length = 261

 Score = 56.4 bits (134), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 12/78 (15%), Positives = 24/78 (30%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +   G     +     +  V               ++  NV+ + E  +M  T 
Sbjct: 178 FINPAGLQAIGDNLFLETAASGAPQVGTPGLNGFGTTQQQTLENSNVSTVEELVNMITTQ 237

Query: 109 RLYMANLQTIKQSHDMMT 126
           R Y  N + I  +  M++
Sbjct: 238 RAYEMNSKVISTADQMLS 255



 Score = 41.4 bits (95), Expect = 0.045,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 22/42 (52%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ +  +A +GL+ Q   + +IS N+AN  TTG       + 
Sbjct: 1  MLPALWVAKTGLSAQDTNLTVISNNLANVSTTGFKRDRAEFA 42


>gi|152965624|ref|YP_001361408.1| hypothetical protein Krad_1658 [Kineococcus radiotolerans SRS30216]
 gi|151360141|gb|ABS03144.1| protein of unknown function DUF1078 domain protein [Kineococcus
           radiotolerans SRS30216]
          Length = 462

 Score = 56.4 bits (134), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 23/44 (52%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  NV++  E  ++    R + AN + I  S +++   ++L R
Sbjct: 419 LEMSNVDLSAEFTNLILAQRGFQANSKVITSSDELLQDLVNLKR 462



 Score = 34.8 bits (78), Expect = 4.2,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 17/42 (40%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S     SGL      M ++  NIAN  T G    S  + 
Sbjct: 1  MLRSMFSGVSGLRSHQTMMDVVGNNIANVNTAGFKSSSVVFA 42


>gi|54307272|ref|YP_128292.1| putative FlgG flagellar basal-body rod protein [Photobacterium
           profundum SS9]
 gi|46911692|emb|CAG18490.1| Putative FlgG flagellar basal-body rod protein [Photobacterium
           profundum SS9]
          Length = 261

 Score = 56.4 bits (134), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 28/77 (36%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +    +   GG   K+ G   +              +   ++  NVNV+ E  +M  T 
Sbjct: 178 FANAAGLQSLGGNLFKETGASGAPIEGVGGEDGLGQISQFSLEGSNVNVVEEMVNMITTQ 237

Query: 109 RLYMANLQTIKQSHDMM 125
           R Y  N + +  +  M+
Sbjct: 238 RAYEMNAKVVSSADQML 254



 Score = 40.6 bits (93), Expect = 0.072,   Method: Composition-based stats.
 Identities = 15/41 (36%), Positives = 23/41 (56%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          + A+  I+ +GLA Q  +MQ+IS N+AN  T G       +
Sbjct: 1  MHAALWISKTGLAAQDTQMQVISNNLANVNTVGFKQDRAVF 41


>gi|333008282|gb|EGK27756.1| flagellar basal-body rod protein flgG domain protein [Shigella
           flexneri K-272]
 gi|333019772|gb|EGK39044.1| flagellar basal-body rod protein flgG domain protein [Shigella
           flexneri K-227]
          Length = 82

 Score = 56.4 bits (134), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 14/82 (17%), Positives = 25/82 (30%)

Query: 50  SFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNR 109
             +  +   G     +     +                G V+  NVNV  E  +M +  R
Sbjct: 1   MNDTGLESIGENLYTETQSSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQR 60

Query: 110 LYMANLQTIKQSHDMMTTTLDL 131
            Y  N + +  +  M+     L
Sbjct: 61  AYEINSKAVSTTDQMLQKLTQL 82


>gi|84624090|ref|YP_451462.1| flagellar basal body rod protein FlgG [Xanthomonas oryzae pv.
           oryzae MAFF 311018]
 gi|161898985|ref|YP_201214.2| flagellar basal body rod protein FlgG [Xanthomonas oryzae pv.
           oryzae KACC10331]
 gi|166712060|ref|ZP_02243267.1| flagellar basal body rod protein FlgG [Xanthomonas oryzae pv.
           oryzicola BLS256]
 gi|188576758|ref|YP_001913687.1| flagellar basal body rod protein FlgG [Xanthomonas oryzae pv.
           oryzae PXO99A]
 gi|188576950|ref|YP_001913879.1| flagellar basal body rod protein FlgG [Xanthomonas oryzae pv.
           oryzae PXO99A]
 gi|84368030|dbj|BAE69188.1| flagellar biosynthesis cell-distal portion of basal-body rod
           [Xanthomonas oryzae pv. oryzae MAFF 311018]
 gi|188521210|gb|ACD59155.1| flagellar basal-body rod protein FlgG [Xanthomonas oryzae pv.
           oryzae PXO99A]
 gi|188521402|gb|ACD59347.1| flagellar basal-body rod protein FlgG [Xanthomonas oryzae pv.
           oryzae PXO99A]
          Length = 261

 Score = 56.4 bits (134), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 18/128 (14%), Positives = 31/128 (24%), Gaps = 3/128 (2%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            L     +     ++       IS  +A                        +   G   
Sbjct: 135 PLQPGIQVPEGAQSLTIGNDGTISVTLA---GQAAAQEIGALTLTDFINPSGLQSKGENL 191

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
             +                      G ++  NVN + E   M ET R Y  N + I  + 
Sbjct: 192 FVETTASGPAQNGTPGLNGLGNTVQGALEGSNVNTVEELVSMIETQRAYEMNAKAISTTD 251

Query: 123 DMMTTTLD 130
            M+    +
Sbjct: 252 AMLGYLNN 259



 Score = 44.5 bits (103), Expect = 0.005,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 21/41 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  +  +A +GL  Q  RM +IS N+AN  TTG       +
Sbjct: 1  MNQALWVAKTGLDAQQTRMSVISNNLANTNTTGFKRDRAAF 41


>gi|317129200|ref|YP_004095482.1| flagellar hook-basal body protein [Bacillus cellulosilyticus DSM
           2522]
 gi|315474148|gb|ADU30751.1| flagellar hook-basal body protein [Bacillus cellulosilyticus DSM
           2522]
          Length = 397

 Score = 56.4 bits (134), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 23/44 (52%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  NV++  E  +M    R + AN + I  S +++   ++L R
Sbjct: 354 LEMSNVDLSEEFTEMIVAQRGFQANTRMITTSDEILQELVNLKR 397



 Score = 35.2 bits (79), Expect = 3.0,   Method: Composition-based stats.
 Identities = 13/72 (18%), Positives = 30/72 (41%), Gaps = 4/72 (5%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR----RKTISFEEVMHGSG 59
          +I + +    G+     ++ ++  NIAN  T+G   G   ++    ++           G
Sbjct: 1  MIRAMYAGIGGMKSFQTKLDVVGNNIANVNTSGFKKGRVTFQDLVSQQMSGAATPTDNRG 60

Query: 60 GVRVKKIGVDQS 71
          G+   ++G+  S
Sbjct: 61 GINPMQVGLGTS 72


>gi|291558205|emb|CBL35322.1| fagellar hook-basal body proteins [Eubacterium siraeum V10Sc8a]
          Length = 503

 Score = 56.4 bits (134), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 19/86 (22%), Positives = 33/86 (38%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
           T      +   G    ++        V         +  SG ++  NV++  E +DM  T
Sbjct: 418 TFDNPNGLEQVGSSYWRETLSSGQPQVNIAGENGSASVVSGALEMSNVDLSQEFSDMIIT 477

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R + AN + I  S  M+   ++L R
Sbjct: 478 QRGFQANSRIITTSDTMLEEIVNLKR 503


>gi|326319097|ref|YP_004236769.1| fagellar hook-basal body protein [Acidovorax avenae subsp. avenae
           ATCC 19860]
 gi|323375933|gb|ADX48202.1| fagellar hook-basal body protein [Acidovorax avenae subsp. avenae
           ATCC 19860]
          Length = 425

 Score = 56.4 bits (134), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/129 (19%), Positives = 43/129 (33%), Gaps = 2/129 (1%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
            A ++++  G          I  N        +       +    SF      +      
Sbjct: 296 FAVSNLSQDGYTAGELTGISIENNGTVMTRYSNGVTRAEGQVALASFRNTQGLASVGSNN 355

Query: 65  KIGVDQSTFVEEFDPGHPV--ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
            +   +S       P         SG ++  NV++  E  +M    R Y AN QTIK   
Sbjct: 356 WVETFESGQPVLGTPTEGKFGGLRSGALEDSNVDLTAELVNMMTAQRAYQANAQTIKTQD 415

Query: 123 DMMTTTLDL 131
            +M+T ++L
Sbjct: 416 QVMSTLVNL 424


>gi|291532057|emb|CBK97642.1| fagellar hook-basal body proteins [Eubacterium siraeum 70/3]
          Length = 503

 Score = 56.4 bits (134), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 19/86 (22%), Positives = 33/86 (38%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
           T      +   G    ++        V         +  SG ++  NV++  E +DM  T
Sbjct: 418 TFDNPNGLEQVGSSYWRETLSSGQPQVNIAGENGSASVVSGALEMSNVDLSQEFSDMIIT 477

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R + AN + I  S  M+   ++L R
Sbjct: 478 QRGFQANSRIITTSDTMLEEIVNLKR 503


>gi|325982371|ref|YP_004294773.1| fagellar hook-basal body protein [Nitrosomonas sp. AL212]
 gi|325531890|gb|ADZ26611.1| fagellar hook-basal body protein [Nitrosomonas sp. AL212]
          Length = 423

 Score = 56.4 bits (134), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 18/83 (21%), Positives = 34/83 (40%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
               + ++  G  R  +        V E + G      +  V+  NV++  E   M    
Sbjct: 341 FVNPQGLNPIGDGRWIETPSSGQPLVGEPNSGTLGVLQASAVESANVDLTSELVKMITAQ 400

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R+Y AN +TI+    ++ T ++L
Sbjct: 401 RMYQANAKTIETQDAILQTLVNL 423



 Score = 35.6 bits (80), Expect = 2.0,   Method: Composition-based stats.
 Identities = 17/95 (17%), Positives = 27/95 (28%), Gaps = 7/95 (7%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSD-----PYRRKTISFEEVMHGSGGV 61
                SGL+  S  + ++  NIAN  T G                  +         G 
Sbjct: 2  GFQQGLSGLSAASTNLDVVGNNIANVNTVGYKQSQAQFTDIFANSLDGAGSSRTQVGIGA 61

Query: 62 RVKKIGV--DQSTFVEEFDPGHPVANASGIVKYPN 94
          RV  +    +Q       +P     N  G  +  +
Sbjct: 62 RVATVAQLFNQGDIAPTNNPLDIAINGQGFFRMSD 96


>gi|163758015|ref|ZP_02165103.1| flagellar basal-body rod protein [Hoeflea phototrophica DFL-43]
 gi|162284304|gb|EDQ34587.1| flagellar basal-body rod protein [Hoeflea phototrophica DFL-43]
          Length = 262

 Score = 56.4 bits (134), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 15/79 (18%), Positives = 28/79 (35%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
              E  +   G    ++        V   D         G ++  NV+ + E  D+    
Sbjct: 178 FVNEAGLEPLGDNLFRETTASGPANVGVPDDPGFAHIQQGYLEGSNVDPIKEITDLISAQ 237

Query: 109 RLYMANLQTIKQSHDMMTT 127
           R Y  N + I+ + +M +T
Sbjct: 238 RAYEMNSKIIQAADEMAST 256



 Score = 44.1 bits (102), Expect = 0.007,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 21/41 (51%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          + +  IA +G+  Q   +++I+ N+AN  TTG       + 
Sbjct: 1  MKALAIAATGMNAQQLNLEVIANNVANINTTGFKRARAEFA 41


>gi|323700469|ref|ZP_08112381.1| fagellar hook-basal body protein [Desulfovibrio sp. ND132]
 gi|323460401|gb|EGB16266.1| fagellar hook-basal body protein [Desulfovibrio desulfuricans
           ND132]
          Length = 516

 Score = 56.4 bits (134), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 20/112 (17%), Positives = 40/112 (35%), Gaps = 2/112 (1%)

Query: 24  IISEN--IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGH 81
            I+EN  I  + T G +     +     +  + ++  GG             V       
Sbjct: 405 TINENGVIEGSYTNGQSQELYTFALADFTNTQGLYSEGGNLYSATTESGQALVGTPGSAG 464

Query: 82  PVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
               AS  ++  NV+   +  ++      Y AN + I  +  +++T + L R
Sbjct: 465 FGTIASNSLEQSNVDTATQLTNLIIIQAAYQANSKIITTADTLLSTAIGLKR 516



 Score = 35.6 bits (80), Expect = 2.3,   Method: Composition-based stats.
 Identities = 19/81 (23%), Positives = 29/81 (35%), Gaps = 4/81 (4%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDT----PGSDPYRRKTISFEEVMHG 57
            +  S +   SGL  QS    ++S N+AN+ TTG         D +     +   +   
Sbjct: 1  MSISGSMYTGISGLQAQSQATSVVSNNLANSTTTGYKSVSIAFEDVFYSTVYAGGSLGQV 60

Query: 58 SGGVRVKKIGVDQSTFVEEFD 78
            GV    +  D S    E  
Sbjct: 61 GNGVTTSSLTTDYSQGAYETT 81


>gi|254521223|ref|ZP_05133278.1| flagellar basal-body rod protein FlgG [Stenotrophomonas sp. SKA14]
 gi|219718814|gb|EED37339.1| flagellar basal-body rod protein FlgG [Stenotrophomonas sp. SKA14]
          Length = 257

 Score = 56.4 bits (134), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 20/128 (15%), Positives = 33/128 (25%), Gaps = 3/128 (2%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            +     I     +V       IS  +A       +                +   G   
Sbjct: 131 PVQPGIQIPEGAQSVTIGTDGTISVKMA---DGAASVEVGALTLTDFVNPAGLQARGENL 187

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
             +                      G ++  NVNV+ E   M ET R Y  N + I  + 
Sbjct: 188 FLETTASGPAQNGNPGLNGLGTVVQGALEGSNVNVVEELVSMIETQRAYEMNAKAISTTD 247

Query: 123 DMMTTTLD 130
            M+    +
Sbjct: 248 SMLGYLNN 255



 Score = 42.2 bits (97), Expect = 0.028,   Method: Composition-based stats.
 Identities = 14/37 (37%), Positives = 19/37 (51%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
            IA +GL  Q  RM ++S N+AN  TTG       +
Sbjct: 1  MWIAKTGLDAQQMRMSVVSNNLANTNTTGFKQDRASF 37


>gi|89072313|ref|ZP_01158892.1| putative flagellar basal-body rod protein [Photobacterium sp.
           SKA34]
 gi|89051845|gb|EAR57297.1| putative flagellar basal-body rod protein [Photobacterium sp.
           SKA34]
          Length = 261

 Score = 56.4 bits (134), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 26/78 (33%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                  +   GG   K+                  +   G ++  NV V+ E  DM  T
Sbjct: 177 KFINPAGLEAVGGNLYKETQASGQPQEMIAGIDGAGSLKQGALEGSNVQVVEEMVDMITT 236

Query: 108 NRLYMANLQTIKQSHDMM 125
            R Y  N + +  + DM+
Sbjct: 237 QRAYEMNAKVVSAADDML 254



 Score = 40.6 bits (93), Expect = 0.066,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 21/41 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          + ++  ++ +G+A Q  +M  IS N+AN  T G       +
Sbjct: 1  MHSALWVSKTGMAAQDTKMTAISNNLANVNTVGFKRDRVVF 41


>gi|26991074|ref|NP_746499.1| flagellar basal body rod protein FlgG [Pseudomonas putida KT2440]
 gi|24986108|gb|AAN69963.1|AE016634_12 flagellar basal-body rod protein FlgG [Pseudomonas putida KT2440]
          Length = 261

 Score = 56.4 bits (134), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 12/78 (15%), Positives = 24/78 (30%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +   G     +     +  V               ++  NV+ + E  +M  T 
Sbjct: 178 FINPAGLQAIGDNLFLETAASGAPQVGTPGLNGFGTTLQQTLENSNVSTVEELVNMITTQ 237

Query: 109 RLYMANLQTIKQSHDMMT 126
           R Y  N + I  +  M++
Sbjct: 238 RAYEMNSKVISTADQMLS 255



 Score = 41.4 bits (95), Expect = 0.038,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 22/42 (52%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ +  +A +GL+ Q   + +IS N+AN  TTG       + 
Sbjct: 1  MLPALWVAKTGLSAQDTNLTVISNNLANVSTTGFKRDRAEFA 42


>gi|260767925|ref|ZP_05876859.1| flagellar basal-body rod protein FlgG [Vibrio furnissii CIP 102972]
 gi|260615955|gb|EEX41140.1| flagellar basal-body rod protein FlgG [Vibrio furnissii CIP 102972]
 gi|315179628|gb|ADT86542.1| flagellar basal-body rod protein FlgG [Vibrio furnissii NCTC 11218]
          Length = 261

 Score = 56.4 bits (134), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 28/78 (35%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                  +   GG   ++     +            +   G+++  NV V+ E  DM  T
Sbjct: 177 KFINPAGLEALGGNLFRETEASGAADELIAGEDGVGSIKQGVLEGSNVQVVEEMVDMITT 236

Query: 108 NRLYMANLQTIKQSHDMM 125
            R Y  N + +  + DM+
Sbjct: 237 QRAYEMNAKVVSAADDML 254



 Score = 41.4 bits (95), Expect = 0.046,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 21/41 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          + ++  ++ +G+A Q  +M  IS N+AN  T G       +
Sbjct: 1  MHSALWVSKTGMAAQDTKMTAISNNLANVNTVGFKRDRVVF 41


>gi|251797436|ref|YP_003012167.1| hypothetical protein Pjdr2_3448 [Paenibacillus sp. JDR-2]
 gi|247545062|gb|ACT02081.1| protein of unknown function DUF1078 domain protein [Paenibacillus
           sp. JDR-2]
          Length = 270

 Score = 56.4 bits (134), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 23/44 (52%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  NV++  E  +M    R + AN + I  S +++   ++L R
Sbjct: 227 LEMSNVDLTNEFTEMIVAQRGFQANSRIITTSDEILQEVVNLKR 270



 Score = 37.2 bits (84), Expect = 0.72,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 18/38 (47%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGS 41
          ++ S +   SG+     ++ +I  NIAN  T G   G 
Sbjct: 1  MLRSMYSGVSGMRGFQTKLDVIGNNIANVNTVGFKGGR 38


>gi|188534168|ref|YP_001907965.1| Flagellar basal-body rod protein [Erwinia tasmaniensis Et1/99]
 gi|188029210|emb|CAO97082.1| Flagellar basal-body rod protein [Erwinia tasmaniensis Et1/99]
          Length = 260

 Score = 56.4 bits (134), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 21/129 (16%), Positives = 41/129 (31%), Gaps = 3/129 (2%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            +  +  I  + L++  +R  ++S      +   +          T   +  +   G   
Sbjct: 135 PVQPAIVIPPNSLSMTISRDGVVS---VTQQGQANPVQVGQLTLSTFINDAGLSSMGENL 191

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
            ++     +                G V+  NVNV  E   M +T R Y  N + I  S 
Sbjct: 192 YQETQASGAPNESNPGNNGAGTLYQGYVETSNVNVAEELVSMIQTQRAYEINSKAISTSD 251

Query: 123 DMMTTTLDL 131
            M+     +
Sbjct: 252 QMLAKLTQI 260



 Score = 42.2 bits (97), Expect = 0.025,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 21/61 (34%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I S  IA +GL  Q   M +I+ N+AN  T G       +                 + 
Sbjct: 1  MIRSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLMYQTMRQPGAQSSEQT 60

Query: 64 K 64
           
Sbjct: 61 T 61


>gi|225628428|ref|ZP_03786462.1| flagellar hook protein FlgE [Brucella ceti str. Cudo]
 gi|225616274|gb|EEH13322.1| flagellar hook protein FlgE [Brucella ceti str. Cudo]
          Length = 456

 Score = 56.4 bits (134), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 37/111 (33%), Gaps = 2/111 (1%)

Query: 25  ISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVA 84
           +  + A      +      YR    +       +       +   +S  V    P     
Sbjct: 346 VGNDGAVVAVYENGTQKVLYRIPLANVASPDRMTVVSGNIFLPSAESGDVRLGFPQGDGM 405

Query: 85  N--ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
               SG ++  N ++  E  DM E  R Y AN +  +   ++M   ++L R
Sbjct: 406 GKIMSGTLEESNADIAQELTDMIEAQRSYTANSKVFQTGSELMDVLVNLKR 456



 Score = 45.6 bits (106), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/90 (20%), Positives = 30/90 (33%), Gaps = 2/90 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG- 60
             L        SG+  Q+ R+  +++NIANA T G       +    +      + SG  
Sbjct: 61  MSLYGMMRTGVSGMNAQANRLSTVADNIANASTVGYKRAETQFSSLVLPSTAGQYNSGSV 120

Query: 61  -VRVKKIGVDQSTFVEEFDPGHPVANASGI 89
              V+    DQ              + +G 
Sbjct: 121 LTDVRYGISDQGGIRSTSSTTDLAIDGNGY 150


>gi|154174192|ref|YP_001407320.1| flagellar hook protein FlgE [Campylobacter curvus 525.92]
 gi|112803531|gb|EAU00875.1| flagellar hook protein FlgE [Campylobacter curvus 525.92]
          Length = 819

 Score = 56.4 bits (134), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/127 (22%), Positives = 47/127 (37%), Gaps = 2/127 (1%)

Query: 9   HIANSGLAVQSARMQIISEN--IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
            I+  G    + R   I E   I  A T G + G       T +  E +   GG    + 
Sbjct: 693 SISQDGYTGGTLRDIKIDETGTIIGAFTNGKSFGLAQVALATFTNNEGLQSEGGNVFSQT 752

Query: 67  GVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
                  +     G     A+  ++  NV++     D+    R + AN +TI  S +M+ 
Sbjct: 753 ANSGEAVIGAAGTGDKGTVAASKLEASNVDLSRALTDLIVIQRGFQANSKTITTSDEMLN 812

Query: 127 TTLDLLR 133
           T L L +
Sbjct: 813 TLLQLKQ 819



 Score = 38.3 bits (87), Expect = 0.36,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 23/72 (31%), Gaps = 4/72 (5%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR----RKTISFEEVMHGSG 59
          ++ S     SGL      M +   NIAN  T G       +     +            G
Sbjct: 1  MMRSLWSGVSGLQAHQIAMDVEGNNIANVNTYGYKYNRANFADILSQTPRVATAPQGELG 60

Query: 60 GVRVKKIGVDQS 71
          G    +IG+  +
Sbjct: 61 GQNPMQIGLGTT 72


>gi|89895710|ref|YP_519197.1| hypothetical protein DSY2964 [Desulfitobacterium hafniense Y51]
 gi|89335158|dbj|BAE84753.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 383

 Score = 56.4 bits (134), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 15/47 (31%), Positives = 23/47 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
              V+  NV++  E  DM  T R + AN + I  S  ++   +DL R
Sbjct: 336 PSTVEMSNVDLSQEFTDMIVTQRGFQANSRVITVSDSLLQELIDLKR 382



 Score = 36.0 bits (81), Expect = 1.6,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 20/41 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          ++ S + A SGL     +M +I  NIAN  TTG       +
Sbjct: 1  MLRSLYSAISGLKNHQIKMDVIGNNIANVNTTGFKRSRVTF 41


>gi|258404710|ref|YP_003197452.1| fagellar hook-basal body protein [Desulfohalobium retbaense DSM
           5692]
 gi|257796937|gb|ACV67874.1| fagellar hook-basal body protein [Desulfohalobium retbaense DSM
           5692]
          Length = 433

 Score = 56.4 bits (134), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 25/48 (52%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            S  ++   V++  +  DM  T R Y AN +TI  + DM+   ++L R
Sbjct: 386 RSNALEQSTVDIAKQFTDMITTQRAYQANSRTITTTDDMLQEVVNLKR 433



 Score = 34.5 bits (77), Expect = 5.5,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 15/41 (36%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSD 42
            L  + +   S L      M +I  N+AN+ TT       
Sbjct: 1  MGLQGALYTGVSALGATGEAMNVIGNNLANSNTTAFKASRT 41


>gi|3286760|emb|CAA05173.1| flagellar hook subunit protein [Campylobacter jejuni]
          Length = 862

 Score = 56.4 bits (134), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 21/100 (21%), Positives = 37/100 (37%)

Query: 34  TTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
           T G T         +++    +   GG   K      +  V E   G      +  ++  
Sbjct: 763 TNGKTFRVAKIAMASVANNSGLEEIGGNLFKVTANSGNIVVGEAGTGGRGEMKTSALEMS 822

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           NV++     ++    R Y AN +TI  S  M+ T + L +
Sbjct: 823 NVDLSRALTELIIIQRGYQANSKTISTSDQMLQTLIQLKQ 862


>gi|16125154|ref|NP_419718.1| flagellar hook protein [Caulobacter crescentus CB15]
 gi|221233884|ref|YP_002516320.1| flagellar hook protein FlgE [Caulobacter crescentus NA1000]
 gi|6226612|sp|P35806|FLGE_CAUCR RecName: Full=Flagellar hook protein flgE
 gi|3493243|gb|AAC33329.1| flagellar hook protein [Caulobacter crescentus CB15]
 gi|13422168|gb|AAK22886.1| flagellar hook protein [Caulobacter crescentus CB15]
 gi|220963056|gb|ACL94412.1| flagellar hook protein FlgE [Caulobacter crescentus NA1000]
          Length = 591

 Score = 56.4 bits (134), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 19/100 (19%), Positives = 35/100 (35%)

Query: 34  TTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
             G T         T S    + G  G   +      +  ++    G   A A   ++  
Sbjct: 492 DNGVTRRIAQVAIATFSNPNGLKGVNGNAYRVTNESGTYSLKAPSQGGAGALAPSTLEAS 551

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            V++  E   +  T R Y A+ + I  +  M+   L++ R
Sbjct: 552 TVDLSQEFTGLITTQRAYSASSKIITTADQMLEELLNIKR 591



 Score = 34.5 bits (77), Expect = 5.4,   Method: Composition-based stats.
 Identities = 20/112 (17%), Positives = 36/112 (32%), Gaps = 5/112 (4%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             + ++     SGL   S+ +  IS+NIAN  T G    +  +     S  +    S G 
Sbjct: 1   MSINSAMLAGVSGLIANSSALAAISDNIANVNTVGFKRSTSNFSTLVTSGNKNQTYSAGG 60

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET--NRLY 111
              +     S   ++       +N    +      V  E  +       R +
Sbjct: 61  VKAQTHQFIS---QQGLTQSTTSNLDISISGAGFFVTTEKPENLTATDTRSF 109


>gi|167626157|ref|YP_001676451.1| flagellar basal-body rod protein FlgG [Shewanella halifaxensis
           HAW-EB4]
 gi|167356179|gb|ABZ78792.1| flagellar basal-body rod protein FlgG [Shewanella halifaxensis
           HAW-EB4]
          Length = 261

 Score = 56.4 bits (134), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 41/128 (32%), Gaps = 3/128 (2%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            L+ +  I    L V  A   I+S  +A      D            +    +   G   
Sbjct: 135 PLVPNIEIPEEALTVTIASDGIVSAQMA---GQTDAQELGQITLVNFTNPAGLEARGNNL 191

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
            ++ G   +                G ++  NVNV+ E  +M  T R Y  N + +  S 
Sbjct: 192 YRETGASGAAVEGIAGDQALGQIRQGALEGANVNVVEEMVEMISTQRAYEMNAKVVSASD 251

Query: 123 DMMTTTLD 130
           DM+     
Sbjct: 252 DMLKFLNQ 259



 Score = 41.8 bits (96), Expect = 0.028,   Method: Composition-based stats.
 Identities = 18/116 (15%), Positives = 37/116 (31%), Gaps = 10/116 (8%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY-------RRKTISFEEVMH 56
           + ++  ++ +GL  Q  +M  I+ N+AN  TTG       +       +R+     +  +
Sbjct: 1   MQSALWVSKTGLTAQDTKMTTIANNLANVNTTGFKRDRVAFNDLFYQVQRQPGGQVDEQN 60

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGH---PVANASGIVKYPNVNVLVETADMRETNR 109
                     G       + F PG            ++      + E       +R
Sbjct: 61  ELPSGLQLGTGTRVVGTQKVFTPGDMLTTNQQLDMAIEGQGFFQIEEANGELSYSR 116


>gi|170722889|ref|YP_001750577.1| flagellar basal body rod protein FlgG [Pseudomonas putida W619]
 gi|169760892|gb|ACA74208.1| flagellar basal-body rod protein FlgG [Pseudomonas putida W619]
          Length = 261

 Score = 56.4 bits (134), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 12/78 (15%), Positives = 24/78 (30%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +   G     +     +  V               ++  NV+ + E  +M  T 
Sbjct: 178 FINPAGLQAIGDNLFLETAASGAPQVGTPGLNGFGTTLQQTLENSNVSTVEELVNMITTQ 237

Query: 109 RLYMANLQTIKQSHDMMT 126
           R Y  N + I  +  M++
Sbjct: 238 RAYEMNSKVISTADQMLS 255



 Score = 41.8 bits (96), Expect = 0.036,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 23/42 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ +  +A +GL+ Q   + +IS N+AN  TTG       ++
Sbjct: 1  MLPALWVAKTGLSAQDTNLTVISNNLANVSTTGFKRDRAEFQ 42


>gi|325291939|ref|YP_004277803.1| flagellar basal body rod protein FlgG [Agrobacterium sp. H13-3]
 gi|325059792|gb|ADY63483.1| flagellar basal body rod protein FlgG [Agrobacterium sp. H13-3]
          Length = 262

 Score = 56.4 bits (134), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 18/122 (14%), Positives = 38/122 (31%), Gaps = 3/122 (2%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           I + +I      +   R   ++  I NA    +            + E  +   G     
Sbjct: 137 IPNINIPTDAQDITITRTGQVTARIGNAADFTELGQLT---IANFANEAGLKPLGDNLFS 193

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           +     +  +   D           ++  NV+ + E  D+    R Y  N + I  + +M
Sbjct: 194 QTPASGAAVIGVPDDPSYGYIKQSYLEGSNVDAVKEITDLITAQRAYEMNSKVITTADEM 253

Query: 125 MT 126
            +
Sbjct: 254 AS 255



 Score = 42.9 bits (99), Expect = 0.014,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 21/40 (52%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          + +  IA +G+  Q   +++I+ NIAN  TTG       +
Sbjct: 1  MRALAIAATGMDAQQTNLEVIANNIANINTTGYKRARAEF 40


>gi|313497764|gb|ADR59130.1| FlgG [Pseudomonas putida BIRD-1]
          Length = 261

 Score = 56.4 bits (134), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 12/78 (15%), Positives = 24/78 (30%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +   G     +     +  V               ++  NV+ + E  +M  T 
Sbjct: 178 FINPAGLQAIGDNLFLETAASGAPQVGTPGLNGFGTTLQQTLENSNVSTVEELVNMITTQ 237

Query: 109 RLYMANLQTIKQSHDMMT 126
           R Y  N + I  +  M++
Sbjct: 238 RAYEMNSKVISTADQMLS 255



 Score = 41.4 bits (95), Expect = 0.040,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 22/42 (52%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ +  +A +GL+ Q   + +IS N+AN  TTG       + 
Sbjct: 1  MLPALWVAKTGLSAQDTNLTVISNNLANVSTTGFKRDRAEFA 42


>gi|114707045|ref|ZP_01439944.1| flagellar hook protein E [Fulvimarina pelagi HTCC2506]
 gi|114537595|gb|EAU40720.1| flagellar hook protein E [Fulvimarina pelagi HTCC2506]
          Length = 390

 Score = 56.4 bits (134), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 17/86 (19%), Positives = 31/86 (36%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                + +    G   +   +                  SG ++  NV++  E  DM  T
Sbjct: 305 RFQSPDQLDVISGNVFRPSQLSGDPQFGFSGELGFGDLISGALEESNVDLASELTDMIVT 364

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y AN +T +   +M+   ++L R
Sbjct: 365 QRSYAANSKTFQTGSEMLDLLVNLKR 390



 Score = 43.3 bits (100), Expect = 0.011,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 30/70 (42%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            +      + SG+  QS ++  +S+NIAN+ TTG       +    I+     + + G 
Sbjct: 1  MSINGVFRTSVSGMNAQSNKLSAVSDNIANSATTGYKRADVEFSSLVINSGGRGNYTSGS 60

Query: 62 RVKKIGVDQS 71
           + +   D S
Sbjct: 61 VLSQTRYDIS 70


>gi|83955135|ref|ZP_00963791.1| putative flagellar hook protein [Sulfitobacter sp. NAS-14.1]
 gi|83840464|gb|EAP79637.1| putative flagellar hook protein [Sulfitobacter sp. NAS-14.1]
          Length = 433

 Score = 56.4 bits (134), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 23/48 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            +G ++  NV++  E  D+ +  R +  N + I    DMM  T  L R
Sbjct: 386 NAGALEGSNVDIAQEMTDLIKAQRAFSTNAKVITTVDDMMDETTRLKR 433



 Score = 36.0 bits (81), Expect = 1.9,   Method: Composition-based stats.
 Identities = 14/39 (35%), Positives = 19/39 (48%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPG 40
            + ++     SGL   S  +  ISENIAN+ T G   G
Sbjct: 1  MSISSALQTGVSGLRANSKAVGSISENIANSNTVGYRRG 39


>gi|83944165|ref|ZP_00956621.1| putative flagellar hook protein [Sulfitobacter sp. EE-36]
 gi|83845032|gb|EAP82913.1| putative flagellar hook protein [Sulfitobacter sp. EE-36]
          Length = 433

 Score = 56.4 bits (134), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 23/48 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            +G ++  NV++  E  D+ +  R +  N + I    DMM  T  L R
Sbjct: 386 NAGALEGSNVDIAQEMTDLIKAQRAFSTNAKVITTVDDMMDETTRLKR 433



 Score = 36.0 bits (81), Expect = 1.9,   Method: Composition-based stats.
 Identities = 14/39 (35%), Positives = 19/39 (48%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPG 40
            + ++     SGL   S  +  ISENIAN+ T G   G
Sbjct: 1  MSISSALQTGVSGLRANSKAVGSISENIANSNTVGYRRG 39


>gi|158321570|ref|YP_001514077.1| flagellar basal body rod protein [Alkaliphilus oremlandii OhILAs]
 gi|158141769|gb|ABW20081.1| flagellar basal body rod protein [Alkaliphilus oremlandii OhILAs]
          Length = 357

 Score = 56.0 bits (133), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 16/110 (14%), Positives = 40/110 (36%), Gaps = 4/110 (3%)

Query: 28  NIANARTTGDTPGSDPYRRK---TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVA 84
           N+ N        G      +    IS  ++ + +   +  +        +E  +      
Sbjct: 247 NVGNQEFQVKENGQVIVAGQLVNQISMTDISNLNSLDKFGQSYYIVREGLEVEETPFTGE 306

Query: 85  NASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD-LLR 133
              G ++  N++ + E   M  T R Y A+ + +K   +M+   ++ + +
Sbjct: 307 VLQGFLEGSNISTIDEMVKMISTMRSYEASSKMVKAYDEMLQKAVNDIGK 356



 Score = 35.2 bits (79), Expect = 2.8,   Method: Composition-based stats.
 Identities = 10/37 (27%), Positives = 15/37 (40%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPG 40
          +    + A S +      + I S N+AN  TTG    
Sbjct: 1  MFRGLYTAVSSMQTNQRMLDITSNNMANVNTTGFKKD 37


>gi|120597307|ref|YP_961881.1| flagellar basal-body rod protein FlgG [Shewanella sp. W3-18-1]
 gi|120557400|gb|ABM23327.1| flagellar basal-body rod protein FlgG [Shewanella sp. W3-18-1]
          Length = 261

 Score = 56.0 bits (133), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 22/128 (17%), Positives = 40/128 (31%), Gaps = 3/128 (2%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            L+ +  I    L V  A   +++  +A      +            +    +   G   
Sbjct: 135 PLVPNIVIPEDALTVTIASDGVVTAQMA---GEAEPQDLGQITLVNFTNPAGLEARGDNL 191

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
            ++                  A   G ++  NVNV+ E  +M  T R Y  N + +  S 
Sbjct: 192 YRETAASGVAVEGVAGDQALGALRQGALEGANVNVVEEMVEMISTQRAYEMNAKVVSASD 251

Query: 123 DMMTTTLD 130
           DM+     
Sbjct: 252 DMLKFLNQ 259



 Score = 41.0 bits (94), Expect = 0.054,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 21/41 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          + ++  ++ +GL  Q  +M  I+ N+AN  TTG       +
Sbjct: 1  MQSALWVSKTGLTAQDTKMTAIANNLANVNTTGFKRDRVAF 41


>gi|332980934|ref|YP_004462375.1| flagellar hook-basal body protein [Mahella australiensis 50-1 BON]
 gi|332698612|gb|AEE95553.1| flagellar hook-basal body protein [Mahella australiensis 50-1 BON]
          Length = 264

 Score = 56.0 bits (133), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 22/48 (45%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             G ++  NV++  E A M    R Y  N + ++ + +M+     + R
Sbjct: 217 RQGFLEASNVDIADEMARMIRAQRAYQLNARVLQTADEMIGLANSIRR 264



 Score = 39.9 bits (91), Expect = 0.12,   Method: Composition-based stats.
 Identities = 13/84 (15%), Positives = 24/84 (28%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I +   A +GL  Q   +  I+ NIAN  TT     +         ++           
Sbjct: 1  MIQALWTAGAGLISQQYNVDTIANNIANVDTTAFKRNTAHIEDMPYVYKLNPAIRQADNE 60

Query: 64 KKIGVDQSTFVEEFDPGHPVANAS 87
            +    +       P +      
Sbjct: 61 GLLPHMGTGARVVSSPKYFAQGPM 84


>gi|167645396|ref|YP_001683059.1| flagellar basal body rod protein FlgG [Caulobacter sp. K31]
 gi|167347826|gb|ABZ70561.1| flagellar basal-body rod protein FlgG [Caulobacter sp. K31]
          Length = 262

 Score = 56.0 bits (133), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 12/77 (15%), Positives = 24/77 (31%)

Query: 55  MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
           +   G     +     +  +                +  NV+ + E   +    R Y  N
Sbjct: 184 LEAIGNNMYMETAASGAANIAAPGQQGFGTLLQNYTEASNVDSVSEITSLIVAQRAYEMN 243

Query: 115 LQTIKQSHDMMTTTLDL 131
            + I  +  M+ TT +L
Sbjct: 244 SKVITTADQMLQTTSNL 260



 Score = 39.9 bits (91), Expect = 0.12,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 22/41 (53%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          + +   A +G+A Q   +++IS NIAN  T G   G   ++
Sbjct: 1  MQALRTAATGMAAQQLNVEVISNNIANMNTVGFKRGRAEFQ 41


>gi|163803171|ref|ZP_02197054.1| putative flagellar basal-body rod protein [Vibrio sp. AND4]
 gi|159173071|gb|EDP57904.1| putative flagellar basal-body rod protein [Vibrio sp. AND4]
          Length = 261

 Score = 56.0 bits (133), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 27/78 (34%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                  +   GG   ++     S            +   G ++  NV V+ E  DM  T
Sbjct: 177 KFINPAGLEAVGGNLFRETAASGSADELIAGEDGAGSIKQGALEGSNVQVVEEMVDMITT 236

Query: 108 NRLYMANLQTIKQSHDMM 125
            R Y  N + +  + DM+
Sbjct: 237 QRAYEMNAKVVSAADDML 254



 Score = 40.6 bits (93), Expect = 0.067,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 28/68 (41%), Gaps = 4/68 (5%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          + ++  ++ +G+A Q  +M  IS N+AN  T G       +          +    G +V
Sbjct: 1  MHSALWVSKTGMAAQDTKMTAISNNLANVNTVGFKRDRVVF----EDLFYSIQRQPGAQV 56

Query: 64 KKIGVDQS 71
           ++    S
Sbjct: 57 DQVNELPS 64


>gi|307823533|ref|ZP_07653762.1| flagellar basal-body rod protein FlgG [Methylobacter tundripaludum
           SV96]
 gi|307735518|gb|EFO06366.1| flagellar basal-body rod protein FlgG [Methylobacter tundripaludum
           SV96]
          Length = 262

 Score = 56.0 bits (133), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/123 (17%), Positives = 38/123 (30%), Gaps = 3/123 (2%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           L  +  +    L+V       +S   A              +         +   G    
Sbjct: 137 LNPAITVPQDALSVTIGTDGTVS---ALQPGVAAPTVLGQIQTANFINPTGLEAVGENLY 193

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
           ++     +  V             G ++  NVNV+ E  +M ET R Y  N + I  +  
Sbjct: 194 RESAASGAPIVGTPGQAEYGTLTQGSLETSNVNVVEELVNMIETQRAYEMNSKAISTTDQ 253

Query: 124 MMT 126
           M++
Sbjct: 254 MLS 256



 Score = 44.5 bits (103), Expect = 0.005,   Method: Composition-based stats.
 Identities = 23/106 (21%), Positives = 36/106 (33%), Gaps = 6/106 (5%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
            +  +A SGL  Q  RM +IS N+AN  TTG   G      + +  + +      V  + 
Sbjct: 4   RALWVAKSGLDAQQTRMAVISNNLANVNTTGFKRG------RAVFEDLMYQNIRQVGAQS 57

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
               Q     +   G        +    NV       D+    R +
Sbjct: 58  TQNTQLPTGLQLGTGVRTVATEKLHTQGNVQPTENALDVAINGRGF 103


>gi|296134367|ref|YP_003641614.1| fagellar hook-basal body protein [Thermincola sp. JR]
 gi|296032945|gb|ADG83713.1| fagellar hook-basal body protein [Thermincola potens JR]
          Length = 362

 Score = 56.0 bits (133), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 24/52 (46%)

Query: 82  PVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
                S  ++  NV V  E  +M   NR Y  + ++I+ S +M+     LL+
Sbjct: 310 DYTLRSSALEGSNVEVAEEMVNMIIANRAYELSSRSIRTSDEMLGMANQLLK 361



 Score = 41.4 bits (95), Expect = 0.043,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 21/42 (50%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ +   A+SG+  Q   M  I+ N+AN  TTG       ++
Sbjct: 1  MLQALWSASSGMLGQQLAMDSIANNLANVNTTGYKKSRVEFQ 42


>gi|288574696|ref|ZP_06393053.1| protein of unknown function DUF1078 domain protein
           [Dethiosulfovibrio peptidovorans DSM 11002]
 gi|288570437|gb|EFC91994.1| protein of unknown function DUF1078 domain protein
           [Dethiosulfovibrio peptidovorans DSM 11002]
          Length = 262

 Score = 56.0 bits (133), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 26/61 (42%)

Query: 70  QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
           ++       P      A G+++  NVNV+ E   + E  R Y A  + I+ S DM    +
Sbjct: 197 ETEDSGAPAPVEVPQVAVGVLERSNVNVVEEMVRLIEAQRAYEAASKGIQTSDDMTGQLI 256

Query: 130 D 130
            
Sbjct: 257 T 257


>gi|89098635|ref|ZP_01171517.1| flagellar hook protein [Bacillus sp. NRRL B-14911]
 gi|89086597|gb|EAR65716.1| flagellar hook protein [Bacillus sp. NRRL B-14911]
          Length = 270

 Score = 56.0 bits (133), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 17/98 (17%), Positives = 32/98 (32%)

Query: 36  GDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNV 95
           G +           S    +   G    K                   +  SG ++  NV
Sbjct: 173 GTSTTGPTIGLARFSNNGGLEKVGNNLYKSTANSGPAQNVLPGTSGAGSLVSGSLEMSNV 232

Query: 96  NVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  E  +M    R + AN + I  S +++   ++L R
Sbjct: 233 DLSEEFTEMIVAQRGFQANTRIITTSDEILQELVNLKR 270



 Score = 37.5 bits (85), Expect = 0.62,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 21/44 (47%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          D ++ S +   SG+     ++ +I  NIAN  T G   G   ++
Sbjct: 5  DKMLRSMYSGISGMKNFQTKLDVIGNNIANVNTFGYKKGRVTFK 48


>gi|187778756|ref|ZP_02995229.1| hypothetical protein CLOSPO_02351 [Clostridium sporogenes ATCC
           15579]
 gi|187772381|gb|EDU36183.1| hypothetical protein CLOSPO_02351 [Clostridium sporogenes ATCC
           15579]
          Length = 350

 Score = 56.0 bits (133), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/129 (17%), Positives = 45/129 (34%), Gaps = 5/129 (3%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           + S  I   GL V S      +     A  +    G           + +   S      
Sbjct: 227 VQSFTIDKDGLIVASLVDGTSAALGQIAMASFKNEGG-----LEKMGKNLYRNSANSGEA 281

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
            I   + T  ++ +        +G+++  NV++  E  +M   NR + A  + I    ++
Sbjct: 282 IIRSGRGTDADKDNSKGYGDMLNGMIEMSNVDLAEEFTEMIVANRAFQACGKMITTGDEI 341

Query: 125 MTTTLDLLR 133
           +   ++L R
Sbjct: 342 LQELVNLKR 350



 Score = 42.2 bits (97), Expect = 0.022,   Method: Composition-based stats.
 Identities = 16/43 (37%), Positives = 23/43 (53%)

Query: 3  YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          Y++ S +   SGL  Q  R+ I+  NIANA TT     S  ++
Sbjct: 16 YMLRSMYSGISGLKAQQTRLDIVGNNIANANTTAFKSQSIRFQ 58


>gi|289612744|emb|CBI60033.1| unnamed protein product [Sordaria macrospora]
          Length = 90

 Score = 56.0 bits (133), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 38/81 (46%)

Query: 53  EVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
           +   G   V  +++        + +DP +P+A+A G V    V+   E  DM +  R Y 
Sbjct: 10  DAASGLATVDAREVVKAGEAPAKRYDPSNPLADAEGNVWEAAVDEPRELVDMLDAARTYQ 69

Query: 113 ANLQTIKQSHDMMTTTLDLLR 133
            N++ +  +  ++T TL L R
Sbjct: 70  NNVEVMSTAKSLITETLRLGR 90


>gi|254516989|ref|ZP_05129047.1| flagellar hook protein FlgE [gamma proteobacterium NOR5-3]
 gi|219674494|gb|EED30862.1| flagellar hook protein FlgE [gamma proteobacterium NOR5-3]
          Length = 429

 Score = 56.0 bits (133), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/129 (19%), Positives = 47/129 (36%), Gaps = 2/129 (1%)

Query: 5   IASAHIANSGLAVQSAR-MQIISENIANAR-TTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            A + +   G +    R ++I    +A AR T G++         + + +  +   G   
Sbjct: 300 FAVSSVVQDGFSAGQLRGLEIDESGVAFARYTNGESRALGQIALASFNNQNGLQPVGDTN 359

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
             +     S  V E          S  ++  NV +  E  D+    R + AN Q I+   
Sbjct: 360 WVETFSSGSPNVGEPGTSGLGVVQSAALEDSNVEITQELVDLIVAQRNFQANAQVIQAED 419

Query: 123 DMMTTTLDL 131
            +  T ++L
Sbjct: 420 AITQTVINL 428



 Score = 34.1 bits (76), Expect = 6.3,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 20/39 (51%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          +   A SG+   +A + +IS NIAN+ TTG       + 
Sbjct: 2  AFSTAISGINAATADLGVISNNIANSSTTGFKASRAEFA 40


>gi|146294548|ref|YP_001184972.1| flagellar basal-body rod protein FlgG [Shewanella putrefaciens
           CN-32]
 gi|145566238|gb|ABP77173.1| flagellar basal-body rod protein FlgG [Shewanella putrefaciens
           CN-32]
          Length = 261

 Score = 56.0 bits (133), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/128 (17%), Positives = 40/128 (31%), Gaps = 3/128 (2%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            L+ +  I    L V  A   +++  +A      +            +    +   G   
Sbjct: 135 PLVPNIVIPEDALTVTIASDGVVTAQMA---GEAEPQDLGQITLVNFTNPSGLEARGDNL 191

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
            ++                  A   G ++  NVNV+ E  +M  T R Y  N + +  S 
Sbjct: 192 YRETAASGVAVEGVAGDQALGALRQGALEGANVNVVEEMVEMISTQRAYEMNAKVVSASD 251

Query: 123 DMMTTTLD 130
           DM+     
Sbjct: 252 DMLKFLNQ 259



 Score = 41.0 bits (94), Expect = 0.053,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 21/41 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          + ++  ++ +GL  Q  +M  I+ N+AN  TTG       +
Sbjct: 1  MQSALWVSKTGLTAQDTKMTAIANNLANVNTTGFKRDRVAF 41


>gi|91976161|ref|YP_568820.1| flagellar basal body rod protein FlgG [Rhodopseudomonas palustris
           BisB5]
 gi|91682617|gb|ABE38919.1| Flagellar basal-body rod FlgG [Rhodopseudomonas palustris BisB5]
          Length = 262

 Score = 56.0 bits (133), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 12/87 (13%), Positives = 28/87 (32%)

Query: 47  KTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
                +  +   G     +            +           ++  NV V+ E +D+  
Sbjct: 176 TRFINKTGLLPIGDNLFTETPASGPPQDGTANTDGFGDMQQKALEQANVEVVNEISDLIA 235

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
             R Y  N + +  +  M+ +T ++ R
Sbjct: 236 AQRAYEMNAKVVSAADQMLQSTSNMFR 262



 Score = 38.3 bits (87), Expect = 0.37,   Method: Composition-based stats.
 Identities = 15/41 (36%), Positives = 25/41 (60%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          + + + A +G+A Q   +Q+IS NIAN RTTG    +  ++
Sbjct: 1  MRALYTAATGMAAQELNVQVISNNIANMRTTGYKKQTAAFQ 41


>gi|83716996|ref|YP_438391.1| flagellar basal body rod protein FlgG [Burkholderia thailandensis
           E264]
 gi|167614839|ref|ZP_02383474.1| flagellar basal body rod protein FlgG [Burkholderia thailandensis
           Bt4]
 gi|257141424|ref|ZP_05589686.1| flagellar basal body rod protein FlgG [Burkholderia thailandensis
           E264]
 gi|83650821|gb|ABC34885.1| flagellar basal-body rod protein FlgG [Burkholderia thailandensis
           E264]
          Length = 262

 Score = 56.0 bits (133), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 19/113 (16%), Positives = 30/113 (26%), Gaps = 3/113 (2%)

Query: 24  IISENIANARTTGDTPGSDPYRRKT---ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPG 80
            I EN   A T           +           +   G     +          E    
Sbjct: 150 AIGENGIVAATMPGASSPSEVGQIQLANFVNPAGLLALGDNLYMETVASGPPNEGEPGTD 209

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
                  G ++  NV V+ E  DM    R Y  N + +  + +M+       R
Sbjct: 210 VFGKIKQGALEGANVQVVEEMVDMIAAQRTYEMNTKVLSAADNMLQQLSQAAR 262



 Score = 39.9 bits (91), Expect = 0.13,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 21/41 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  +  I+ +GL  Q A++Q I+ N+AN  T G       +
Sbjct: 1  MNQAMWISKTGLQAQDAKLQAIANNLANVNTIGFKRDRVVF 41


>gi|190574261|ref|YP_001972106.1| flagellar basal body rod protein FlgG [Stenotrophomonas maltophilia
           K279a]
 gi|194365678|ref|YP_002028288.1| flagellar basal body rod protein FlgG [Stenotrophomonas maltophilia
           R551-3]
 gi|190012183|emb|CAQ45806.1| putative flagellar basal-body rod protein [Stenotrophomonas
           maltophilia K279a]
 gi|194348482|gb|ACF51605.1| flagellar basal-body rod protein FlgG [Stenotrophomonas maltophilia
           R551-3]
          Length = 261

 Score = 56.0 bits (133), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/128 (15%), Positives = 33/128 (25%), Gaps = 3/128 (2%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            +     I     +V       IS  +A       +                +   G   
Sbjct: 135 PVQPGIQIPEGAQSVTIGTDGTISVKMA---DGAASVEVGALTLTDFVNPAGLQARGENL 191

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
             +                      G ++  NVNV+ E   M ET R Y  N + I  + 
Sbjct: 192 FLETTASGPAQNGNPGLNGLGTVVQGALEGSNVNVVEELVSMIETQRAYEMNAKAISTTD 251

Query: 123 DMMTTTLD 130
            M+    +
Sbjct: 252 SMLGYLNN 259



 Score = 44.1 bits (102), Expect = 0.007,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 21/41 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  +  IA +GL  Q  RM ++S N+AN  TTG       +
Sbjct: 1  MNQALWIAKTGLDAQQMRMSVVSNNLANTNTTGFKQDRASF 41


>gi|241766920|ref|ZP_04764726.1| flagellar basal body FlaE domain protein [Acidovorax delafieldii
           2AN]
 gi|241362624|gb|EER58472.1| flagellar basal body FlaE domain protein [Acidovorax delafieldii
           2AN]
          Length = 425

 Score = 56.0 bits (133), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/83 (25%), Positives = 35/83 (42%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
               + +   GG    +        +     G+  A  SG ++  NV++  E  +M    
Sbjct: 342 FRNTQGLAAVGGNNWVETFESGQPVLGTATDGNFGALRSGALEDSNVDLTAELVNMMTAQ 401

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y AN QTIK    +M+T ++L
Sbjct: 402 RAYQANAQTIKTQDQVMSTLVNL 424



 Score = 34.8 bits (78), Expect = 4.2,   Method: Composition-based stats.
 Identities = 22/75 (29%), Positives = 30/75 (40%), Gaps = 4/75 (5%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          S     SGL   S  + +I  NIANA TTG       +            GS G     I
Sbjct: 2  SFQQGLSGLNASSKNLDVIGHNIANANTTGFKASRAEFA----EMVASAIGSAGGNNAGI 57

Query: 67 GVDQSTFVEEFDPGH 81
          GV+ +   ++F  G+
Sbjct: 58 GVETANVAQQFTQGN 72


>gi|119477951|ref|ZP_01618051.1| Flagellar basal body rod protein [marine gamma proteobacterium
           HTCC2143]
 gi|119448864|gb|EAW30106.1| Flagellar basal body rod protein [marine gamma proteobacterium
           HTCC2143]
          Length = 261

 Score = 56.0 bits (133), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 14/78 (17%), Positives = 24/78 (30%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +   G     +     +    E           G ++  NV+V+ E   M  T 
Sbjct: 178 FINPTGLQSIGSNLFIETAASGTPQQGEPGIDGLGRLEQGALENSNVDVVEELVSMITTQ 237

Query: 109 RLYMANLQTIKQSHDMMT 126
           R Y  N + I  +  M+ 
Sbjct: 238 RTYEMNSKVISTADQMLQ 255



 Score = 44.9 bits (104), Expect = 0.004,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 22/41 (53%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  +  I+ +GL+ Q  R+  IS N+ANA T G    S  +
Sbjct: 1  MNQALWISKTGLSAQDTRLATISNNLANAATVGYKRDSVVF 41


>gi|92116936|ref|YP_576665.1| flagellar basal body rod protein FlgG [Nitrobacter hamburgensis
           X14]
 gi|91799830|gb|ABE62205.1| Flagellar basal-body rod FlgG [Nitrobacter hamburgensis X14]
          Length = 262

 Score = 56.0 bits (133), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 13/87 (14%), Positives = 26/87 (29%)

Query: 47  KTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
                +  +   G     +            +           ++  NV V+ E +D+  
Sbjct: 176 TRFVNKAGLQPVGDNNFTETPASGPPQDGIANIDGYGDMQQSSLEQANVEVVSEISDLIA 235

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
             R Y  N + I  +  M+ +   L R
Sbjct: 236 AQRAYEMNAKVISAADQMLQSASALFR 262



 Score = 37.5 bits (85), Expect = 0.59,   Method: Composition-based stats.
 Identities = 15/41 (36%), Positives = 24/41 (58%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          + + + A +G+A Q   +Q+IS NIAN RTTG       ++
Sbjct: 1  MRALYTAATGMAAQELNVQVISNNIANLRTTGYKKQRAAFQ 41


>gi|254292905|ref|YP_003058928.1| flagellar basal body rod protein FlgG [Hirschia baltica ATCC 49814]
 gi|254041436|gb|ACT58231.1| flagellar basal-body rod protein FlgG [Hirschia baltica ATCC 49814]
          Length = 261

 Score = 56.0 bits (133), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 15/85 (17%), Positives = 29/85 (34%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                  +   G   + +     +  V +           G ++  NVN + E + +   
Sbjct: 177 RFVNPAGLDAIGDNLLLETVASGAANVGQAGALGFGTILQGFLETSNVNAVTEISALINA 236

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLL 132
            R Y  N + I  + +M+ TT  L 
Sbjct: 237 QRAYEMNSKVITATDEMLQTTSQLK 261



 Score = 41.4 bits (95), Expect = 0.041,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 26/62 (41%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          + +   A +G+  Q   +++IS NIAN  TTG       ++    +  E M  S      
Sbjct: 1  MRALSTAATGMQAQQLNVEVISNNIANMNTTGYKRQRAEFQDLLYTNMEKMGVSSSDANT 60

Query: 65 KI 66
           +
Sbjct: 61 IV 62


>gi|315648129|ref|ZP_07901230.1| fagellar hook-basal body protein [Paenibacillus vortex V453]
 gi|315276775|gb|EFU40118.1| fagellar hook-basal body protein [Paenibacillus vortex V453]
          Length = 274

 Score = 56.0 bits (133), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/119 (21%), Positives = 45/119 (37%), Gaps = 9/119 (7%)

Query: 24  IISENIANAR--TTGDTPGSDPYRRKTISFEEVMHGSGG--VRVKKIGVDQSTFVEEFDP 79
            I++N A  +  + G T          I   E +   GG   RV    V           
Sbjct: 156 TIAQNGAIIQKLSDGTTEAGAIIGVAKIPNPEGLEKIGGNMYRVTLNAVPDGDVAAVMFE 215

Query: 80  GHPVANASGI-----VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G+     +G      ++  NV++  E ++M    R + AN + I  S +++   ++L R
Sbjct: 216 GNDAEEGTGAIIAGQLEMSNVDLTSEFSEMIVAQRGFQANSRIITTSDEVLQEVVNLKR 274



 Score = 36.8 bits (83), Expect = 0.97,   Method: Composition-based stats.
 Identities = 19/73 (26%), Positives = 31/73 (42%), Gaps = 5/73 (6%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY-----RRKTISFEEVMHGS 58
          ++ S +   SG+     ++ +I  NIAN  T G   G   +     +  +         S
Sbjct: 1  MLRSMYSGISGMRGFQTKLDVIGNNIANVNTVGFKAGRVMFKDILSQTMSGVTPGTDDPS 60

Query: 59 GGVRVKKIGVDQS 71
          GGV  K+IG+  S
Sbjct: 61 GGVNAKQIGLGVS 73


>gi|83591885|ref|YP_425637.1| hypothetical protein Rru_A0546 [Rhodospirillum rubrum ATCC 11170]
 gi|83574799|gb|ABC21350.1| conserved hypothetical protein [Rhodospirillum rubrum ATCC 11170]
          Length = 661

 Score = 56.0 bits (133), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 15/86 (17%), Positives = 28/86 (32%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
           T      M+   G   ++        V               ++   V++  E  +M  T
Sbjct: 576 TFVNPNGMNSLSGNVFQETDNSGLPTVRAAGEASAGTVNQATLEASTVDLGSEFTNMITT 635

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y A  + I  + DM+   + + R
Sbjct: 636 QRAYSAAAKIITTADDMLDELIRIKR 661



 Score = 35.6 bits (80), Expect = 2.1,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 22/59 (37%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
            L  +     SGL  QS+ +  I++N+ N  T G       ++        +   S G
Sbjct: 1  MSLYGALFSGVSGLQAQSSALGAIADNVTNVNTVGYKGTKVNFQTLVTQQVSLTAYSPG 59


>gi|325288803|ref|YP_004264984.1| fagellar hook-basal body protein [Syntrophobotulus glycolicus DSM
           8271]
 gi|324964204|gb|ADY54983.1| fagellar hook-basal body protein [Syntrophobotulus glycolicus DSM
           8271]
          Length = 299

 Score = 56.0 bits (133), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 48/133 (36%), Gaps = 19/133 (14%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M     S     +     +  +  I+    N  +     G++ Y+    S E  ++ +G 
Sbjct: 185 MGTFTDSDSTDGTTDPAYTVPLYQIAVATCNNPSGLTPVGNNYYQESPNSGEVKINVAGE 244

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
              + I                   ++G ++  NVN+  +  DM  T R + AN + I  
Sbjct: 245 NGNRSI-------------------STGCLEMSNVNLSEQFTDMIVTQRGFQANSRVITV 285

Query: 121 SHDMMTTTLDLLR 133
           S  M+   +DL R
Sbjct: 286 SDSMLQELVDLKR 298



 Score = 34.8 bits (78), Expect = 3.9,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 20/68 (29%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ S + A SGL  +   M +I  NIAN  T G       +                   
Sbjct: 1  MMRSLYSAISGLKNEQIAMDVIGNNIANVNTVGYKYSRTGFSTMLSQSMRGASAPDTADP 60

Query: 64 KKIGVDQS 71
             G    
Sbjct: 61 STYGGTDG 68


>gi|34498340|ref|NP_902555.1| flagellar hook protein flgE [Chromobacterium violaceum ATCC 12472]
 gi|34104194|gb|AAQ60553.1| flagellar hook protein flgE [Chromobacterium violaceum ATCC 12472]
          Length = 416

 Score = 56.0 bits (133), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 37/109 (33%), Gaps = 2/109 (1%)

Query: 25  ISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVA 84
           I+ N     T  ++      +    +F            +      S       PG   A
Sbjct: 308 IASNGVVQATFSNSQTKTLGQVALATFVNPQGLLNLGGNQWQQSGNSGPATVNQPGTGNA 367

Query: 85  NASGI--VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
                  V+  NVN+  E  +M    R Y AN QTIK    ++ T L++
Sbjct: 368 GTLTAGSVEDSNVNLTNELVNMITAQRYYQANAQTIKTQDTLIQTLLNI 416


>gi|134095097|ref|YP_001100172.1| flagellar hook protein FlgE [Herminiimonas arsenicoxydans]
 gi|133739000|emb|CAL62048.1| Flagellar hook protein FlgE [Herminiimonas arsenicoxydans]
          Length = 418

 Score = 56.0 bits (133), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 16/83 (19%), Positives = 30/83 (36%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +    +   G  +  +                  +  S  ++  NV++  E  +M    
Sbjct: 335 FANPNGLQNIGDNQWVETAESGVALTSAPGSSGLGSVQSARIEESNVDLTAELVNMITAQ 394

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y AN QTIK    ++ T ++L
Sbjct: 395 RYYQANAQTIKTQDQILQTLVNL 417


>gi|154253003|ref|YP_001413827.1| flagellar basal body rod protein FlgG [Parvibaculum lavamentivorans
           DS-1]
 gi|154156953|gb|ABS64170.1| flagellar basal-body rod protein FlgG [Parvibaculum lavamentivorans
           DS-1]
          Length = 261

 Score = 56.0 bits (133), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 29/78 (37%)

Query: 55  MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
           +   GG    +     +  +         +   G ++  NVN + E   +    R Y  N
Sbjct: 184 LDPLGGNLFAETPASGAPTIGTPGNDGLGSVLQGFLETSNVNAVSEITSLITAQRAYEMN 243

Query: 115 LQTIKQSHDMMTTTLDLL 132
            + I  S +MM+ T ++ 
Sbjct: 244 AKIITASDEMMSVTSNMK 261



 Score = 40.6 bits (93), Expect = 0.066,   Method: Composition-based stats.
 Identities = 15/41 (36%), Positives = 23/41 (56%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          + S  IA +G+  Q   +++IS NIAN  TTG   G   ++
Sbjct: 1  MQSLSIAATGMMAQQLNVEVISNNIANMSTTGFKRGRAEFQ 41


>gi|83646788|ref|YP_435223.1| flagellar basal body rod protein [Hahella chejuensis KCTC 2396]
 gi|83634831|gb|ABC30798.1| Flagellar basal body rod protein [Hahella chejuensis KCTC 2396]
          Length = 254

 Score = 56.0 bits (133), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 14/84 (16%), Positives = 31/84 (36%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
               ++ +  +G           +    +           G ++  NV+++ E  ++   
Sbjct: 169 KFVNDQALESAGQGLYIPADDAGAPLYSQAGVNGLGMIQQGFLESSNVDLVKELVELVTA 228

Query: 108 NRLYMANLQTIKQSHDMMTTTLDL 131
            R Y AN   I+ + ++M  T DL
Sbjct: 229 QRGYQANSHVIRAADEIMQITNDL 252



 Score = 36.8 bits (83), Expect = 0.91,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 32/85 (37%), Gaps = 1/85 (1%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-GVR 62
          +I + ++A +GL     +++ IS N+AN  T         +              G G+ 
Sbjct: 1  MIDALYVAETGLQAGQKQIETISNNMANLNTVAYKKSRVAFGDLVSRQPAASAAEGKGIG 60

Query: 63 VKKIGVDQSTFVEEFDPGHPVANAS 87
             +G   +    +FD G   A  +
Sbjct: 61 SVGMGTKVAEVSMQFDSGDLKATEN 85


>gi|295690742|ref|YP_003594435.1| fagellar hook-basal body protein [Caulobacter segnis ATCC 21756]
 gi|295432645|gb|ADG11817.1| fagellar hook-basal body protein [Caulobacter segnis ATCC 21756]
          Length = 587

 Score = 56.0 bits (133), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/129 (17%), Positives = 42/129 (32%), Gaps = 12/129 (9%)

Query: 17  VQSARMQIIS-ENIANAR-----------TTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           VQS      +  N+ N               G T         T S    + G  G   +
Sbjct: 459 VQSVNTNGTAFGNLTNIEVDEDGYVSAIFDNGVTRRIAQVAVATFSNPNGLKGVNGNAYR 518

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
                 +  ++    G   + A   ++   V++  E   +  T R Y A+ + I  +  M
Sbjct: 519 VTNESGTYSLKPPGQGGAGSLAPSTLEASTVDLSTEFTGLITTQRAYSASSKIITTADQM 578

Query: 125 MTTTLDLLR 133
           +   L++ R
Sbjct: 579 LEELLNIKR 587



 Score = 36.4 bits (82), Expect = 1.4,   Method: Composition-based stats.
 Identities = 21/112 (18%), Positives = 36/112 (32%), Gaps = 5/112 (4%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             + ++     SGL   S+ +  IS+NIAN  T G    S  +     S  +    S G 
Sbjct: 1   MSINSAMLAGVSGLVANSSALAAISDNIANVNTVGYKRSSSNFSTLVTSGSKNQTYSAGG 60

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET--NRLY 111
              +     S   ++       +N    +      V  E  +       R +
Sbjct: 61  VKAQTHQFIS---QQGLTQSTTSNLDLSISGSGFFVATEKPENLTAADTRSF 109


>gi|153831580|ref|ZP_01984247.1| flagellar basal-body rod protein FlgG [Vibrio harveyi HY01]
 gi|156976143|ref|YP_001447049.1| flagellar basal body rod protein [Vibrio harveyi ATCC BAA-1116]
 gi|269960118|ref|ZP_06174494.1| Putative flagellar basal-body rod protein flgG [Vibrio harveyi
           1DA3]
 gi|148872090|gb|EDL70907.1| flagellar basal-body rod protein FlgG [Vibrio harveyi HY01]
 gi|156527737|gb|ABU72822.1| hypothetical protein VIBHAR_04914 [Vibrio harveyi ATCC BAA-1116]
 gi|269835089|gb|EEZ89172.1| Putative flagellar basal-body rod protein flgG [Vibrio harveyi
           1DA3]
          Length = 261

 Score = 56.0 bits (133), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 26/78 (33%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                  +   GG   ++                  +   G ++  NV V+ E  DM  T
Sbjct: 177 KFINPAGLEAVGGNLFRETEASGPADELIAGEDGAGSIKQGALEGSNVQVVEEMVDMITT 236

Query: 108 NRLYMANLQTIKQSHDMM 125
            R Y  N + +  + DM+
Sbjct: 237 QRAYEMNAKVVSAADDML 254



 Score = 41.0 bits (94), Expect = 0.058,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 28/68 (41%), Gaps = 4/68 (5%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          + ++  ++ +G+A Q  +M  IS N+AN  T G       +          +    G +V
Sbjct: 1  MHSALWVSKTGMAAQDTKMTAISNNLANVNTVGFKRDRVVF----EDLFYSIQRQPGAQV 56

Query: 64 KKIGVDQS 71
           ++    S
Sbjct: 57 DQVNELPS 64


>gi|323492336|ref|ZP_08097489.1| flagellar basal body rod protein FlgG [Vibrio brasiliensis LMG
           20546]
 gi|323313383|gb|EGA66494.1| flagellar basal body rod protein FlgG [Vibrio brasiliensis LMG
           20546]
          Length = 261

 Score = 56.0 bits (133), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 19/123 (15%), Positives = 36/123 (29%), Gaps = 3/123 (2%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            L     I ++ L++       ++   A    +                   +   GG  
Sbjct: 135 PLEPQIQIPDNALSLSVGVDGTVT---ATTVDSSTPEQLGQITLAKFINPAGLEAVGGNL 191

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
            ++                      G ++  NV V+ E  DM  T R Y  N + +  + 
Sbjct: 192 FRETEASGQADELTAGEDGVGIIKQGALEGSNVQVVEEMVDMITTQRAYEMNAKVVSAAD 251

Query: 123 DMM 125
           DM+
Sbjct: 252 DML 254



 Score = 41.0 bits (94), Expect = 0.053,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 28/68 (41%), Gaps = 4/68 (5%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          + ++  ++ +G+A Q  +M  IS N+AN  T G       +          +    G +V
Sbjct: 1  MHSALWVSKTGMAAQDTKMTAISNNLANVNTVGFKRDRVVF----EDLFYSIQRQPGAQV 56

Query: 64 KKIGVDQS 71
           ++    S
Sbjct: 57 DQVNELPS 64


>gi|32267203|ref|NP_861235.1| flagellar hook protein FlgE [Helicobacter hepaticus ATCC 51449]
 gi|32263256|gb|AAP78301.1| flagellar hook protein FlgE [Helicobacter hepaticus ATCC 51449]
          Length = 718

 Score = 56.0 bits (133), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 14/85 (16%), Positives = 31/85 (36%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +    +   GG    + G      V   + G     +   ++  NV++      +    
Sbjct: 634 FANNAGLQAEGGNVYSQTGNSGEPMVGAANTGRRGGVSGSKLEMSNVDLSRSLTQLIVVQ 693

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R + AN + +  S  ++ T L+L +
Sbjct: 694 RGFQANSKAVTTSDQILNTLLNLKQ 718



 Score = 37.9 bits (86), Expect = 0.51,   Method: Composition-based stats.
 Identities = 10/33 (30%), Positives = 15/33 (45%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ S     SG+      + + S NIAN  T G
Sbjct: 1  MLRSLWSGVSGMQAHQIALDVESNNIANVNTVG 33


>gi|54308099|ref|YP_129119.1| flagellar basal body rod protein FlgG [Photobacterium profundum
           SS9]
 gi|46912525|emb|CAG19317.1| putative polar flagellar FlgG [Photobacterium profundum SS9]
          Length = 262

 Score = 56.0 bits (133), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 24/72 (33%)

Query: 55  MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
           +   G       G                A    +++  NVNV  E  +M E  R+Y  N
Sbjct: 185 LEPIGQNLFLPTGASGDAQEGVPGLDGLGAIRQSMLETSNVNVTEELVNMIEAQRVYEMN 244

Query: 115 LQTIKQSHDMMT 126
            + I     M++
Sbjct: 245 SKVISTVDQMLS 256



 Score = 40.2 bits (92), Expect = 0.093,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 19/41 (46%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  +  ++ +GL  Q   +  IS N+ANA T G       +
Sbjct: 1  MHPALWVSKTGLDAQQTNISTISNNLANASTIGFKKSRAVF 41


>gi|209963559|ref|YP_002296474.1| flagellar hook protein FlgE [Rhodospirillum centenum SW]
 gi|209957025|gb|ACI97661.1| flagellar hook protein FlgE [Rhodospirillum centenum SW]
          Length = 434

 Score = 56.0 bits (133), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 15/84 (17%), Positives = 34/84 (40%)

Query: 50  SFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNR 109
           +  + +    G   +        ++ +   G   A     ++  NV++  E   + ET R
Sbjct: 351 TNPDGLRRMDGNAFQVSRESGDYYLWDAGSGKAGAVDGAALEASNVDIAEELTSIIETQR 410

Query: 110 LYMANLQTIKQSHDMMTTTLDLLR 133
            Y +N + I+ + +M+     L+R
Sbjct: 411 AYSSNAKIIQTADEMLDEVSRLMR 434



 Score = 34.5 bits (77), Expect = 4.6,   Method: Composition-based stats.
 Identities = 17/59 (28%), Positives = 26/59 (44%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
            + ++ +   SGLA QSA+   IS+NI+N+ T G       +     S       S G
Sbjct: 1  MSIYSAMYSGVSGLAAQSAKFAAISDNISNSSTVGYKRSGVQFSTLVTSASSPGSYSAG 59


>gi|261341492|ref|ZP_05969350.1| flagellar basal-body rod protein FlgG [Enterobacter cancerogenus
           ATCC 35316]
 gi|288316288|gb|EFC55226.1| flagellar basal-body rod protein FlgG [Enterobacter cancerogenus
           ATCC 35316]
          Length = 261

 Score = 56.0 bits (133), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 24/77 (31%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +   GG   ++                      G ++  NV V+ E  DM    
Sbjct: 178 FVNPAGLEAIGGNLYRETAASGEAVEGVAGEEAFGQLEQGSLEGSNVQVVEEMVDMITVQ 237

Query: 109 RLYMANLQTIKQSHDMM 125
           R Y  N + +  + DM+
Sbjct: 238 RAYEMNAKMVSAADDML 254



 Score = 40.6 bits (93), Expect = 0.081,   Method: Composition-based stats.
 Identities = 15/38 (39%), Positives = 21/38 (55%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGS 41
          +  +  I+ +GLA Q A+M  IS N+AN  TTG     
Sbjct: 1  MNPALWISKTGLAAQDAKMSAISNNLANVNTTGFKRDR 38


>gi|15964415|ref|NP_384768.1| flagellar basal body rod protein FlgG [Sinorhizobium meliloti 1021]
 gi|307311557|ref|ZP_07591198.1| flagellar basal-body rod protein FlgG [Sinorhizobium meliloti
           BL225C]
 gi|307318912|ref|ZP_07598343.1| flagellar basal-body rod protein FlgG [Sinorhizobium meliloti AK83]
 gi|17380480|sp|Q52946|FLGG_RHIME RecName: Full=Flagellar basal-body rod protein flgG; AltName:
           Full=Distal rod protein
 gi|15073592|emb|CAC45234.1| Flagellar basal-body rod protein [Sinorhizobium meliloti 1021]
 gi|306895326|gb|EFN26081.1| flagellar basal-body rod protein FlgG [Sinorhizobium meliloti AK83]
 gi|306899574|gb|EFN30203.1| flagellar basal-body rod protein FlgG [Sinorhizobium meliloti
           BL225C]
          Length = 262

 Score = 56.0 bits (133), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 13/79 (16%), Positives = 25/79 (31%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
              E  +   G    ++        V               ++  NV+ + E  D+    
Sbjct: 178 FVNEAGLEPMGENLFRQTPASGDPIVGTPADPGFAQVKQNYLESSNVDPVKEITDLISAQ 237

Query: 109 RLYMANLQTIKQSHDMMTT 127
           R Y  N + I+ + +M  T
Sbjct: 238 RAYEMNSKIIQAADEMAAT 256



 Score = 44.5 bits (103), Expect = 0.004,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 21/40 (52%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          + +  IA +G+  Q   +++I+ NIAN  TTG       +
Sbjct: 1  MKALSIAATGMNAQQLNLEVIANNIANINTTGYKRARAEF 40


>gi|90411007|ref|ZP_01219021.1| putative polar flagellar FlgG [Photobacterium profundum 3TCK]
 gi|90328220|gb|EAS44531.1| putative polar flagellar FlgG [Photobacterium profundum 3TCK]
          Length = 262

 Score = 56.0 bits (133), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 24/72 (33%)

Query: 55  MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
           +   G       G                A    +++  NVNV  E  +M E  R+Y  N
Sbjct: 185 LEPIGQNLFLPTGASGDAQEGVPGLDGLGAIRQSMLETSNVNVTEELVNMIEAQRVYEMN 244

Query: 115 LQTIKQSHDMMT 126
            + I     M++
Sbjct: 245 SKVISTVDQMLS 256



 Score = 40.2 bits (92), Expect = 0.093,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 19/41 (46%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  +  ++ +GL  Q   +  IS N+ANA T G       +
Sbjct: 1  MHPALWVSKTGLDAQQTNISTISNNLANASTIGFKKSRAVF 41


>gi|258622490|ref|ZP_05717512.1| Putative flagellar basal-body rod protein flgG [Vibrio mimicus
           VM573]
 gi|258625232|ref|ZP_05720144.1| Putative flagellar basal-body rod protein flgG [Vibrio mimicus
           VM603]
 gi|258582479|gb|EEW07316.1| Putative flagellar basal-body rod protein flgG [Vibrio mimicus
           VM603]
 gi|258585190|gb|EEW09917.1| Putative flagellar basal-body rod protein flgG [Vibrio mimicus
           VM573]
          Length = 261

 Score = 56.0 bits (133), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/110 (19%), Positives = 37/110 (33%), Gaps = 7/110 (6%)

Query: 23  QIISENIANARTTGDTPGSDPYRRK-------TISFEEVMHGSGGVRVKKIGVDQSTFVE 75
            ++S +I    T   T   DP  ++              +   GG   ++          
Sbjct: 145 NVVSLSIGVDGTVSATTAGDPAPQQLGQITLAKFINPAGLEAVGGNLFRETDASGLAEEL 204

Query: 76  EFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
                   +   G ++  NV V+ E  DM  T R Y  N + +  + DM+
Sbjct: 205 VAGQDGTGSIKQGALEGSNVQVVEEMVDMITTQRAYEMNAKVVSATDDML 254



 Score = 40.6 bits (93), Expect = 0.068,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 21/41 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          + ++  ++ +G+A Q  +M  IS N+AN  T G       +
Sbjct: 1  MHSALWVSKTGMAAQDTKMTAISNNLANVNTAGFKRDRVVF 41


>gi|226321475|ref|ZP_03797002.1| flagellar hook-basal body complex protein [Borrelia burgdorferi
           Bol26]
 gi|226233271|gb|EEH32023.1| flagellar hook-basal body complex protein [Borrelia burgdorferi
           Bol26]
          Length = 282

 Score = 56.0 bits (133), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 15/94 (15%), Positives = 35/94 (37%), Gaps = 12/94 (12%)

Query: 41  SDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVE 100
            +P   K       +      + ++I +     +            +  ++  NVN + E
Sbjct: 199 ENPRFLKKQGNSLWIDTKTSGKAQEIDISLRPKI-----------ETETLEASNVNAVKE 247

Query: 101 TADMRETNRLYMANLQTIKQSHDMMTTTLD-LLR 133
              M E NR Y AN +T++    ++   ++ + +
Sbjct: 248 MVLMIEINRAYEANQKTLQTEDSLLGKLINEIGK 281



 Score = 45.2 bits (105), Expect = 0.003,   Method: Composition-based stats.
 Identities = 11/71 (15%), Positives = 27/71 (38%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++   + A SG+  +  ++  +S N+AN    G        +         ++  G  + 
Sbjct: 1  MVRGIYTAASGMMAERRKLDTVSNNLANIDLIGYKKDLSIQKAFPEMLIRRLNDDGLYKF 60

Query: 64 KKIGVDQSTFV 74
           K  ++ +  V
Sbjct: 61 PKGHLETAPVV 71


>gi|39998143|ref|NP_954094.1| flagellar basal-body rod protein FlgG [Geobacter sulfurreducens
           PCA]
 gi|39985089|gb|AAR36444.1| flagellar basal-body rod protein FlgG [Geobacter sulfurreducens
           PCA]
          Length = 242

 Score = 56.0 bits (133), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 11/61 (18%), Positives = 21/61 (34%)

Query: 70  QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
            +       P        G ++  NV+ + E   + ET R +    + +K   DM     
Sbjct: 177 PTDPQAVPQPVQGEPVRQGYLELSNVSAIQEMVQLIETQRFFEMCSKAVKAYDDMAGKAA 236

Query: 130 D 130
           +
Sbjct: 237 N 237



 Score = 35.2 bits (79), Expect = 3.3,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 18/41 (43%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          + +  + A SG      R+ ++S N+AN  T G       +
Sbjct: 1  MNSGIYSALSGNIAAMKRLDVLSNNLANVNTPGFKKDRMTF 41


>gi|319764539|ref|YP_004128476.1| flagellar hook-basal body protein [Alicycliphilus denitrificans BC]
 gi|330826755|ref|YP_004390058.1| flagellar hook-basal body protein [Alicycliphilus denitrificans
           K601]
 gi|317119100|gb|ADV01589.1| flagellar hook-basal body protein [Alicycliphilus denitrificans BC]
 gi|329312127|gb|AEB86542.1| flagellar hook-basal body protein [Alicycliphilus denitrificans
           K601]
          Length = 426

 Score = 56.0 bits (133), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 19/60 (31%), Positives = 29/60 (48%)

Query: 72  TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             +     G   A  SG ++  NV++  E  +M    R Y AN QTIK    +M+T ++L
Sbjct: 366 PVMGVATEGAFGALRSGALEDSNVDLTAELVNMMTAQRAYQANAQTIKTQDQVMSTLVNL 425


>gi|261407975|ref|YP_003244216.1| fagellar hook-basal body protein [Paenibacillus sp. Y412MC10]
 gi|261284438|gb|ACX66409.1| fagellar hook-basal body protein [Paenibacillus sp. Y412MC10]
          Length = 274

 Score = 56.0 bits (133), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 43/119 (36%), Gaps = 9/119 (7%)

Query: 24  IISENIANAR--TTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQST-------FV 74
            I++N A  +  + G T          I   E +   GG   +               F 
Sbjct: 156 TIAQNGAIIQKMSDGTTEEGAIIGVAKIPNPEGLEKIGGNMYRVTLNAVPDGDLAAVMFE 215

Query: 75  EEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
                    A  +G ++  NV++  E ++M    R + AN + I  S +++   ++L R
Sbjct: 216 GNNAEEGTGAIIAGQLEMSNVDLTGEFSEMIVAQRGFQANSRIITTSDEVLQEVVNLKR 274



 Score = 36.4 bits (82), Expect = 1.3,   Method: Composition-based stats.
 Identities = 19/73 (26%), Positives = 31/73 (42%), Gaps = 5/73 (6%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY-----RRKTISFEEVMHGS 58
          ++ S +   SG+     ++ +I  NIAN  T G   G   +     +  +         S
Sbjct: 1  MLRSMYSGISGMRGFQTKLDVIGNNIANVNTVGFKAGRVMFKDILSQTMSGVTPGTDDPS 60

Query: 59 GGVRVKKIGVDQS 71
          GGV  K+IG+  S
Sbjct: 61 GGVNAKQIGLGVS 73


>gi|315452912|ref|YP_004073182.1| flagellar hook protein FlgE [Helicobacter felis ATCC 49179]
 gi|315131964|emb|CBY82592.1| flagellar hook protein FlgE [Helicobacter felis ATCC 49179]
          Length = 718

 Score = 55.7 bits (132), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 14/89 (15%), Positives = 35/89 (39%)

Query: 45  RRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
              + + +  +   GG    + G      +   + G   A +   ++  NV++     ++
Sbjct: 630 AMASFANDAGLQAIGGSVFSETGNSGKALIGAANTGRRGAVSGSKLESSNVDLSRSLTNL 689

Query: 105 RETNRLYMANLQTIKQSHDMMTTTLDLLR 133
               R + AN + +  S  ++ T L+L +
Sbjct: 690 IVVQRGFQANSKAVTTSDQILNTLLNLKQ 718



 Score = 35.2 bits (79), Expect = 3.1,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 16/33 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ S     +G+      + I S NIAN  TTG
Sbjct: 1  MLRSLWSGVNGMQAHQIALDIESNNIANVNTTG 33


>gi|90579911|ref|ZP_01235719.1| putative polar flagellar FlgG [Vibrio angustum S14]
 gi|90438796|gb|EAS63979.1| putative polar flagellar FlgG [Vibrio angustum S14]
          Length = 262

 Score = 55.7 bits (132), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 24/72 (33%)

Query: 55  MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
           M   G       G                +    +++  NVNV  E  +M E  R+Y  N
Sbjct: 185 MEPIGQNLFLPTGASGDPQEGTPGLEGYGSIRQSMLETSNVNVTEELVNMIEAQRVYEMN 244

Query: 115 LQTIKQSHDMMT 126
            + I     M++
Sbjct: 245 SKVISTVDQMLS 256



 Score = 42.2 bits (97), Expect = 0.026,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  +  ++ +GL  Q   +  IS N+ANA T G   G   +
Sbjct: 1  MHPALWVSKTGLDAQQTNISTISNNLANASTVGFKKGRAVF 41


>gi|32266375|ref|NP_860407.1| flagellar hook-associated protein FlgK [Helicobacter hepaticus ATCC
           51449]
 gi|32262425|gb|AAP77473.1| flagellar hook-associated protein FlgK [Helicobacter hepaticus ATCC
           51449]
          Length = 606

 Score = 55.7 bits (132), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 15/107 (14%), Positives = 31/107 (28%), Gaps = 2/107 (1%)

Query: 29  IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHP--VANA 86
           +AN          D Y  K    +  +         ++           +       A  
Sbjct: 500 VANMMQQLQYDDVDFYINKYEKKQMRIPEYFQFLAGRVANQTEATQRTKETKDAVLSAVK 559

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
              +    V++  E  ++ +    Y AN + I     M+ T L + +
Sbjct: 560 KEHLAISQVSLDEEMVNLIKFQGGYAANAKVITTIDRMIETLLGIKQ 606



 Score = 43.3 bits (100), Expect = 0.011,   Method: Composition-based stats.
 Identities = 14/74 (18%), Positives = 30/74 (40%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  +++S + + +GL      + +   NI+NA     +      R +   + +  +   G
Sbjct: 1  MGGILSSLNTSYTGLQAHQLMVDVTGNNISNASDEFYSRQRVLVRPERPLYYQDYNLGRG 60

Query: 61 VRVKKIGVDQSTFV 74
          V ++ I      FV
Sbjct: 61 VSIETIQRIHDEFV 74


>gi|89075497|ref|ZP_01161908.1| putative polar flagellar FlgG [Photobacterium sp. SKA34]
 gi|89048769|gb|EAR54340.1| putative polar flagellar FlgG [Photobacterium sp. SKA34]
          Length = 262

 Score = 55.7 bits (132), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 24/72 (33%)

Query: 55  MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
           M   G       G                +    +++  NVNV  E  +M E  R+Y  N
Sbjct: 185 MEPIGQNLFLPTGASGDPQEGTPGLEGYGSIRQSMLETSNVNVTEELVNMIEAQRVYEMN 244

Query: 115 LQTIKQSHDMMT 126
            + I     M++
Sbjct: 245 SKVISTVDQMLS 256



 Score = 42.2 bits (97), Expect = 0.027,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  +  ++ +GL  Q   +  IS N+ANA T G   G   +
Sbjct: 1  MHPALWVSKTGLDAQQTNISTISNNLANASTVGFKKGRAVF 41


>gi|311105935|ref|YP_003978788.1| flagellar hook protein FlgE [Achromobacter xylosoxidans A8]
 gi|310760624|gb|ADP16073.1| flagellar hook protein FlgE [Achromobacter xylosoxidans A8]
          Length = 491

 Score = 55.7 bits (132), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/128 (17%), Positives = 41/128 (32%), Gaps = 13/128 (10%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
            +  +I+  G             +I  + T G+T           S  + +   G     
Sbjct: 377 FSGINISGDG-------------SIVASYTNGETQIVGTIVLADFSNLQGLQPVGNNAWT 423

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           +        + +              +  NV++  E  +M    R Y AN QTIK   ++
Sbjct: 424 ETSASGQPILGQPGSNGLSKVVGQATESSNVDMSKELVNMIIAQRTYQANSQTIKTQDEI 483

Query: 125 MTTTLDLL 132
           M   ++L 
Sbjct: 484 MQVLMNLK 491


>gi|220924578|ref|YP_002499880.1| flagellar basal-body rod protein FlgG [Methylobacterium nodulans
           ORS 2060]
 gi|219949185|gb|ACL59577.1| flagellar basal-body rod protein FlgG [Methylobacterium nodulans
           ORS 2060]
          Length = 263

 Score = 55.7 bits (132), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 17/124 (13%), Positives = 37/124 (29%), Gaps = 12/124 (9%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVD 69
           I+ SG+   +   Q   +N+               +      +  +   G     +    
Sbjct: 151 ISASGMVQATVPGQTAPQNL------------GQIQLARFVNKVGLESIGDNLFTETLAS 198

Query: 70  QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
                               ++  NVN + E + +    R Y  N + +  +  M++TT 
Sbjct: 199 GPAITGNPGAEGFGNLQQSYLEEANVNAVTEISSLIAAQRAYEMNSKVVTAADQMLSTTS 258

Query: 130 DLLR 133
            + R
Sbjct: 259 QMFR 262



 Score = 34.8 bits (78), Expect = 3.5,   Method: Composition-based stats.
 Identities = 15/41 (36%), Positives = 24/41 (58%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          + + + A +G+A Q   +Q+IS NIAN RTTG       ++
Sbjct: 1  MRALYAAATGMAAQELNVQVISNNIANLRTTGYKRQQAHFQ 41


>gi|296133040|ref|YP_003640287.1| fagellar hook-basal body protein [Thermincola sp. JR]
 gi|296031618|gb|ADG82386.1| fagellar hook-basal body protein [Thermincola potens JR]
          Length = 419

 Score = 55.7 bits (132), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 34/85 (40%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +    +   GG    +     +  +     G     + G ++  NV++  E  DM  T 
Sbjct: 335 FNNPAGLMKVGGNLFTQSNNSGNAQIGAAGTGGRGEISPGKLEMSNVDLSQEFTDMIITQ 394

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R + AN + I  S +M+   ++L R
Sbjct: 395 RGFQANSRIITVSDEMLQELVNLKR 419



 Score = 38.7 bits (88), Expect = 0.27,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 18/42 (42%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S     SGL     RM +I  NIAN  T G       ++
Sbjct: 1  MMRSMFAGVSGLRNHQVRMDVIGNNIANVNTIGYKKARATFQ 42


>gi|317047693|ref|YP_004115341.1| flagellar basal-body rod protein FlgG [Pantoea sp. At-9b]
 gi|316949310|gb|ADU68785.1| flagellar basal-body rod protein FlgG [Pantoea sp. At-9b]
          Length = 260

 Score = 55.7 bits (132), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/126 (16%), Positives = 38/126 (30%), Gaps = 3/126 (2%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
               I  +  ++  +R  I+S      +   +          T   +  +   G    ++
Sbjct: 138 PGITIPANATSITVSRDGIVS---VTQQGQTNPTQVGQLTLSTFMNDAGLDSLGENLYQE 194

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
                +                G V+  NVNV  E   M +T R Y  N + +  S  M+
Sbjct: 195 TQASGAATQSTPGQNGAGLLYQGYVETSNVNVAEELVSMIQTQRAYEINSKAVSTSDQML 254

Query: 126 TTTLDL 131
                L
Sbjct: 255 AKLTQL 260



 Score = 43.3 bits (100), Expect = 0.011,   Method: Composition-based stats.
 Identities = 16/93 (17%), Positives = 26/93 (27%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I S  IA +GL  Q   M +I+ N+AN  T G       +                 + 
Sbjct: 1  MIRSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRSRAVFEDLMYQTVRQPGTQSSEQT 60

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVN 96
                Q            +     + +  N  
Sbjct: 61 TLPSGMQIGTGVRPVTTERLHTQGNLSQTSNSK 93


>gi|205373385|ref|ZP_03226189.1| flagellar hook protein FlgE [Bacillus coahuilensis m4-4]
          Length = 426

 Score = 55.7 bits (132), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 26/54 (48%)

Query: 80  GHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
               A  SG ++  NV++  E  +M    R + AN + I  S +++   ++L R
Sbjct: 373 EGRGAIQSGSLEMSNVDLSEEFTEMITAQRSFQANTRIITTSDEILQELVNLKR 426



 Score = 36.4 bits (82), Expect = 1.3,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 20/42 (47%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S +   SG+     ++ +I  NIAN  T G   G   ++
Sbjct: 1  MLRSMYSGISGMKNAQTKLDVIGNNIANVNTYGFKKGRVTFQ 42


>gi|153834448|ref|ZP_01987115.1| flagellar basal-body rod protein FlgG [Vibrio harveyi HY01]
 gi|156973589|ref|YP_001444496.1| flagellar basal body rod protein FlgG [Vibrio harveyi ATCC
           BAA-1116]
 gi|269961601|ref|ZP_06175963.1| flagellar basal-body rod protein FlgG [Vibrio harveyi 1DA3]
 gi|148869144|gb|EDL68176.1| flagellar basal-body rod protein FlgG [Vibrio harveyi HY01]
 gi|156525183|gb|ABU70269.1| hypothetical protein VIBHAR_01292 [Vibrio harveyi ATCC BAA-1116]
 gi|269833642|gb|EEZ87739.1| flagellar basal-body rod protein FlgG [Vibrio harveyi 1DA3]
          Length = 262

 Score = 55.7 bits (132), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 23/78 (29%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +   G       G                     +++  NVNV  E  +M E  
Sbjct: 179 FVNPGGLEPIGQNLYLPTGASGDPQEGVPGLDGLGEIRQSMLEASNVNVTEELVNMIEAQ 238

Query: 109 RLYMANLQTIKQSHDMMT 126
           R+Y  N + I     MM+
Sbjct: 239 RVYEMNSKVISSVDKMMS 256



 Score = 41.0 bits (94), Expect = 0.060,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 19/41 (46%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  +  ++ +GL  Q   +  IS N+ANA T G       +
Sbjct: 1  MHPALWVSKTGLDAQQTNIATISNNLANASTVGYKKSRAVF 41


>gi|331005440|ref|ZP_08328819.1| Flagellar basal-body rod protein flgG [gamma proteobacterium
           IMCC1989]
 gi|330420716|gb|EGG95003.1| Flagellar basal-body rod protein flgG [gamma proteobacterium
           IMCC1989]
          Length = 258

 Score = 55.7 bits (132), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 16/86 (18%), Positives = 29/86 (33%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
           T   E  +   GG               +           G ++  NVN++ E   +   
Sbjct: 173 TFLNESGLSSLGGGIYLPSLKSGDPSYGQPGEIGFGTLQQGFIESSNVNLVEELTSLMSA 232

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y  N + ++ + DM++    L R
Sbjct: 233 QRGYELNARVVQAADDMLSIINTLRR 258



 Score = 42.6 bits (98), Expect = 0.020,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 23/42 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ + +I+ +GL  Q  +++ I+ N++N  T G       ++
Sbjct: 1  MLDAFNISATGLQSQQTQVETIANNLSNVNTDGYKKSKVIFQ 42


>gi|306841276|ref|ZP_07473987.1| flagellar hook protein FlgE [Brucella sp. BO2]
 gi|306288678|gb|EFM60009.1| flagellar hook protein FlgE [Brucella sp. BO2]
          Length = 383

 Score = 55.7 bits (132), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 37/111 (33%), Gaps = 2/111 (1%)

Query: 25  ISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVA 84
           +  + A      +      YR    +       +       +   +S  V    P     
Sbjct: 273 VGNDGAVVAVYENGTQKVLYRIPLANVASPDRMTVVSGNVFLPSAESGDVRLGFPQGDGM 332

Query: 85  N--ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
               SG ++  N ++  E  DM E  R Y AN +  +   ++M   ++L R
Sbjct: 333 GKIMSGTLEESNADIAQELTDMIEAQRSYTANSKVFQTGSELMDVLVNLKR 383



 Score = 36.4 bits (82), Expect = 1.3,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 27/77 (35%), Gaps = 2/77 (2%)

Query: 15 LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG--VRVKKIGVDQST 72
          +  Q+ R+  +++NIANA T G       +    +      + SG     V+    DQ  
Sbjct: 1  MNAQANRLSTVADNIANASTVGYKRAETQFSSLVLPSTAGQYNSGSVLTDVRYGISDQGG 60

Query: 73 FVEEFDPGHPVANASGI 89
                      + +G 
Sbjct: 61 IRSTSSTTDLAIDGNGY 77


>gi|330445350|ref|ZP_08309002.1| flagellar basal-body rod protein FlgG [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
 gi|328489541|dbj|GAA03499.1| flagellar basal-body rod protein FlgG [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
          Length = 262

 Score = 55.7 bits (132), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 24/72 (33%)

Query: 55  MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
           M   G       G                +    +++  NVNV  E  +M E  R+Y  N
Sbjct: 185 MEPIGQNLFLPTGASGDPQEGTPGLEGYGSIRQSMLETSNVNVTEELVNMIEAQRVYEMN 244

Query: 115 LQTIKQSHDMMT 126
            + I     M++
Sbjct: 245 SKVISTVDQMLS 256



 Score = 42.2 bits (97), Expect = 0.027,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  +  ++ +GL  Q   +  IS N+ANA T G   G   +
Sbjct: 1  MHPALWVSKTGLDAQQTNISTISNNLANASTVGFKKGRAVF 41


>gi|320354701|ref|YP_004196040.1| hypothetical protein Despr_2613 [Desulfobulbus propionicus DSM
           2032]
 gi|320123203|gb|ADW18749.1| protein of unknown function DUF1078 domain protein [Desulfobulbus
           propionicus DSM 2032]
          Length = 117

 Score = 55.7 bits (132), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/129 (25%), Positives = 55/129 (42%), Gaps = 13/129 (10%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +I+    A SG    SA+++  + NIAN  T G       YR+  +     +  S    V
Sbjct: 1   MISGIQSALSGAQAFSAKIESNAHNIANLNTEG-------YRKSRVVLSAGVAQSVQATV 53

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
            ++  D    V   +     A      +  NV++  E  D+      Y ANL+T++ S +
Sbjct: 54  GRV--DAPGPVVNEETAQGYAVR----ELSNVDLGEEIPDLMRNTHGYAANLRTVQVSDN 107

Query: 124 MMTTTLDLL 132
           M+ T LD+ 
Sbjct: 108 MLQTLLDIK 116


>gi|159045792|ref|YP_001534586.1| flagellar basal body rod protein FlgG [Dinoroseobacter shibae DFL
           12]
 gi|157913552|gb|ABV94985.1| flagellar basal-body rod protein FlgG [Dinoroseobacter shibae DFL
           12]
          Length = 261

 Score = 55.7 bits (132), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 10/61 (16%), Positives = 22/61 (36%)

Query: 71  STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
              +             G ++  +V+ + E  ++ E  R Y  N + +  +  MM  T  
Sbjct: 200 PPLIGVPGEDGLGTFRQGYLEASSVDAVREVTELIEAQRGYELNSKVMTAADQMMGATSQ 259

Query: 131 L 131
           +
Sbjct: 260 I 260



 Score = 45.6 bits (106), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 23/41 (56%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          + +  IA +G++ Q  R+++IS N+AN  TTG       + 
Sbjct: 1  MRALTIAATGMSAQQMRVEVISNNLANMNTTGYNARRAEFA 41


>gi|15615012|ref|NP_243315.1| flagellar basal body rod protein FlgG [Bacillus halodurans C-125]
 gi|10175069|dbj|BAB06168.1| flagellar hook protein [Bacillus halodurans C-125]
          Length = 263

 Score = 55.7 bits (132), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 23/44 (52%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  NV++  E  +M    R + AN + I  S +++   ++L R
Sbjct: 220 LEMSNVDLSEEFTEMIVAQRGFQANTRIITTSDEILQELVNLKR 263



 Score = 37.9 bits (86), Expect = 0.50,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 22/59 (37%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
          ++ S +   SG+     ++ +I  NIAN  T G   G   ++             G  R
Sbjct: 1  MLRSMYSGISGMRNFQTKLDVIGNNIANVNTFGYKKGRTTFQDMVSQQLAGATAPGANR 59


>gi|298507080|gb|ADI85803.1| flagellar basal body rod protein FlgF [Geobacter sulfurreducens
           KN400]
          Length = 242

 Score = 55.7 bits (132), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 13/61 (21%), Positives = 22/61 (36%)

Query: 70  QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
            +       P        G ++Y NV+ + E   + ET R +    + IK   DM     
Sbjct: 177 PTDPQAVPQPVQGEPVRQGHLEYSNVSAIQEMVQLIETQRFFEMCSKAIKAYDDMAGKAA 236

Query: 130 D 130
           +
Sbjct: 237 N 237



 Score = 35.2 bits (79), Expect = 3.2,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 18/41 (43%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          + +  + A SG      R+ ++S N+AN  T G       +
Sbjct: 1  MNSGIYSALSGNIAAMKRLDVLSNNLANVNTPGFKKDRMTF 41


>gi|16126303|ref|NP_420867.1| flagellar basal body rod protein FlgG [Caulobacter crescentus CB15]
 gi|221235080|ref|YP_002517516.1| flagellar basal body rod protein FlgG [Caulobacter crescentus
           NA1000]
 gi|13637955|sp|Q06172|FLGG_CAUCR RecName: Full=Flagellar basal-body rod protein flgG; AltName:
           Full=Distal rod protein
 gi|13423543|gb|AAK24035.1| flagellar basal-body rod protein FlgG [Caulobacter crescentus CB15]
 gi|220964252|gb|ACL95608.1| flagellar basal-body rod protein flgG [Caulobacter crescentus
           NA1000]
          Length = 262

 Score = 55.7 bits (132), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 17/43 (39%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             +  NV+ + E   +    R Y  N + I  +  M+  T  L
Sbjct: 218 YTEASNVDAVSEITALITAQRAYEMNSKVISTADQMLQATSQL 260



 Score = 41.4 bits (95), Expect = 0.037,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 21/41 (51%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          + +   A SG+A Q   +++IS NIAN  T G       ++
Sbjct: 1  MQALRTAASGMAAQQLNVEVISNNIANMNTVGFKRQRAEFQ 41


>gi|187918628|ref|YP_001884193.1| flagellar basal-body rod protein FlgF [Borrelia hermsii DAH]
 gi|119861476|gb|AAX17271.1| flagellar basal-body rod protein FlgF [Borrelia hermsii DAH]
          Length = 282

 Score = 55.7 bits (132), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 25/49 (51%), Gaps = 1/49 (2%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD-LLR 133
            +G ++  NVN + E   M   NR Y AN +TI+    ++   ++ + +
Sbjct: 233 ETGALEGSNVNAINEMVSMITVNRAYEANQKTIQTEDSLLGKLINEIGK 281



 Score = 49.1 bits (115), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/71 (19%), Positives = 30/71 (42%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++   + A SG+  Q  R+ +IS N+AN    G       ++         ++  G  ++
Sbjct: 1  MVRGIYTAASGMMAQRHRLDVISNNLANIDLAGYKKDLSVHKAFPEMLIRRLNDDGLYKL 60

Query: 64 KKIGVDQSTFV 74
           K  ++ +  V
Sbjct: 61 PKGYLETAPVV 71


>gi|218681813|ref|ZP_03529560.1| flagellar hook protein FlgE [Rhizobium etli CIAT 894]
          Length = 400

 Score = 55.7 bits (132), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 30/82 (36%)

Query: 52  EEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
            + +    G      G    T              SG ++  NV++  E  +M E  R Y
Sbjct: 319 PDKLTLMSGNVYSANGQSGVTVTGFPQTNGLGTIKSGALEGSNVDLAGELTEMIEAQRSY 378

Query: 112 MANLQTIKQSHDMMTTTLDLLR 133
            AN +  +   D+M   ++L R
Sbjct: 379 TANSKVFQTGSDIMDVLVNLKR 400


>gi|2275161|gb|AAB81413.1| FlgG [Sinorhizobium meliloti]
          Length = 262

 Score = 55.7 bits (132), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 13/79 (16%), Positives = 25/79 (31%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
              E  +   G    ++        V               ++  NV+ + E  D+    
Sbjct: 178 FVNEAGLEPMGENLFRQTPASGDPIVGTPADPGFAQIKQNYLESSNVDPVKEITDLISAQ 237

Query: 109 RLYMANLQTIKQSHDMMTT 127
           R Y  N + I+ + +M  T
Sbjct: 238 RAYEMNSKIIQAADEMAAT 256



 Score = 44.5 bits (103), Expect = 0.004,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 21/40 (52%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          + +  IA +G+  Q   +++I+ NIAN  TTG       +
Sbjct: 1  MKALSIAATGMNAQQLNLEVIANNIANINTTGYKRARAEF 40


>gi|148546709|ref|YP_001266811.1| flagellar basal body rod protein FlgG [Pseudomonas putida F1]
 gi|148510767|gb|ABQ77627.1| flagellar basal-body rod protein FlgG [Pseudomonas putida F1]
          Length = 261

 Score = 55.7 bits (132), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 12/78 (15%), Positives = 24/78 (30%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +   G     +     +  V               ++  NV+ + E  +M  T 
Sbjct: 178 FINPAGLQAMGNNLFLETAASGAPQVGTPGLNGFGTTLQQTLENSNVSTVEELVNMITTQ 237

Query: 109 RLYMANLQTIKQSHDMMT 126
           R Y  N + I  +  M++
Sbjct: 238 RAYEMNSKVISTADQMLS 255



 Score = 41.0 bits (94), Expect = 0.050,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 23/42 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ +  +A +GL+ Q   + +IS N+AN  TTG       ++
Sbjct: 1  MLPALWVAKTGLSAQDTNLTVISNNLANVSTTGFKRDRAEFQ 42


>gi|114799186|ref|YP_758987.1| flagellar basal body rod protein FlgG [Hyphomonas neptunium ATCC
           15444]
 gi|114739360|gb|ABI77485.1| flagellar basal-body rod protein FlgG [Hyphomonas neptunium ATCC
           15444]
          Length = 261

 Score = 55.7 bits (132), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/129 (16%), Positives = 39/129 (30%), Gaps = 3/129 (2%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            L     I      +  +R   +   +A      +              E+ +   G   
Sbjct: 135 PLADGIVIPEDARRISISRDGEV---VAYFDNETEGQAIGSISLVRFVNEKGLEAMGDNM 191

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
            ++                      G ++   V+V+ E AD+ E  R Y  N + I  S 
Sbjct: 192 FRETEASGPANRLIPGTEGMGFLRQGYIEDSAVDVVKEIADLIEAQRGYELNSKVITASD 251

Query: 123 DMMTTTLDL 131
           +M++ T  L
Sbjct: 252 EMLSVTTRL 260



 Score = 46.8 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 32/81 (39%), Gaps = 1/81 (1%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          + S  IA SG+A Q  R+++IS NIAN  TT   P         +  + +  G+   +V 
Sbjct: 1  MKSLQIAASGMAAQQMRVEVISNNIANMSTTAYRP-RTAEFSDLMYQQYLTPGTITSQVG 59

Query: 65 KIGVDQSTFVEEFDPGHPVAN 85
           +            P     +
Sbjct: 60 TVVPSGIQLGSGVRPTTVSMD 80


>gi|84514833|ref|ZP_01002196.1| hypothetical protein SKA53_11453 [Loktanella vestfoldensis SKA53]
 gi|84510992|gb|EAQ07446.1| hypothetical protein SKA53_11453 [Loktanella vestfoldensis SKA53]
          Length = 1778

 Score = 55.7 bits (132), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 12/83 (14%), Positives = 31/83 (37%)

Query: 49   ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
             + +  +   G     +        + E       +  SG ++  NV++  E  ++    
Sbjct: 1694 FNNQNGLKQVGNATFVQTAESGDPIIGEAGTEGFGSIQSGALERSNVDITEELVNLITAQ 1753

Query: 109  RLYMANLQTIKQSHDMMTTTLDL 131
            R + A  + I+ S  +  T +++
Sbjct: 1754 RNFQAASKAIETSTQLTQTIINI 1776


>gi|288940411|ref|YP_003442651.1| flagellar basal-body rod protein FlgG [Allochromatium vinosum DSM
           180]
 gi|288895783|gb|ADC61619.1| flagellar basal-body rod protein FlgG [Allochromatium vinosum DSM
           180]
          Length = 263

 Score = 55.7 bits (132), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 16/128 (12%), Positives = 35/128 (27%), Gaps = 3/128 (2%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            L  +  I     ++   +   +S                  +         +   G   
Sbjct: 135 ALQPALVIPADAESITIGKDGTVS---IKQPNQVGEVQIGQIQLANFINPAGLQPIGENL 191

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
            ++     +            +     ++  NVN+  E  +M ET R Y  N + I  + 
Sbjct: 192 FRETTASGAPQQSNPGENGFGSLVQCSLETSNVNMAEELVNMIETQRAYEVNSKAISAAD 251

Query: 123 DMMTTTLD 130
            M+    +
Sbjct: 252 SMLQFVNN 259



 Score = 46.4 bits (108), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/41 (36%), Positives = 22/41 (53%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  +  IA +GL  Q  RM ++S N+AN  TTG   G   +
Sbjct: 1  MNQALWIAKTGLDAQQTRMSVVSNNLANVNTTGFKKGRAVF 41


>gi|315121847|ref|YP_004062336.1| flagellar basal body rod protein FlgG [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313495249|gb|ADR51848.1| flagellar basal body rod protein FlgG [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 262

 Score = 55.7 bits (132), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 15/76 (19%), Positives = 28/76 (36%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
              E  +   G   V +  V     +   D         G ++  NV+ + E ++M    
Sbjct: 179 FVNEAGLRNIGDNLVTRTSVSGEAIISSPDDAGFAHIKQGYLEASNVDAVKEISEMISAQ 238

Query: 109 RLYMANLQTIKQSHDM 124
           R Y  N + I+ + +M
Sbjct: 239 RAYEMNSKVIQAADEM 254


>gi|194014627|ref|ZP_03053244.1| flagellar basal-body rod protein FlgG (Distal rod protein)
           [Bacillus pumilus ATCC 7061]
 gi|194013653|gb|EDW23218.1| flagellar basal-body rod protein FlgG (Distal rod protein)
           [Bacillus pumilus ATCC 7061]
          Length = 263

 Score = 55.7 bits (132), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 24/44 (54%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  NV++  E  +M    R + +N +TI  S +++   ++L R
Sbjct: 220 LEMSNVDLTDEFTEMIIAQRGFQSNAKTITTSDEILQELVNLKR 263


>gi|163758031|ref|ZP_02165119.1| flagellar hook protein E [Hoeflea phototrophica DFL-43]
 gi|162284320|gb|EDQ34603.1| flagellar hook protein E [Hoeflea phototrophica DFL-43]
          Length = 419

 Score = 55.7 bits (132), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 22/44 (50%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  NV++  E  DM    R Y AN +  +   D+M   ++L R
Sbjct: 376 LESSNVDIAEELTDMIAAQRSYTANSKVFQTGSDLMEVLVNLKR 419



 Score = 45.2 bits (105), Expect = 0.003,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 26/64 (40%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            L        SG+  Q+ R+  +++N+ANA TTG    S  +    +      + SG V
Sbjct: 1  MSLYGMMRTGASGMNAQANRLGTVADNMANANTTGYKRASAEFSSLILPGSAGSYNSGAV 60

Query: 62 RVKK 65
              
Sbjct: 61 TTDV 64


>gi|58039417|ref|YP_191381.1| flagellar basal body rod protein FlgG [Gluconobacter oxydans 621H]
 gi|58001831|gb|AAW60725.1| Flagellar basal-body rod protein FlgG [Gluconobacter oxydans 621H]
          Length = 263

 Score = 55.7 bits (132), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/117 (19%), Positives = 38/117 (32%)

Query: 16  AVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVE 75
             QS  +    +         +T      +    + E  +   G     +        + 
Sbjct: 145 NAQSISVDQSGQVSVQIAGQNNTTLVGQLQLGIFTNENGLAAMGQNLFTQTTASGDAMMG 204

Query: 76  EFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
             +     +   G V+  NVNV+ E  D+    R Y  N + I  S DMM T  +L 
Sbjct: 205 NPEAVGYGSIMQGYVENSNVNVVTEITDLITAQRAYEMNSKVITASDDMMKTVTNLG 261



 Score = 39.9 bits (91), Expect = 0.12,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 24/62 (38%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          + +  IA +G+  Q   ++ IS NIAN  TTG       ++         +  S      
Sbjct: 1  MRALDIAGTGMQAQQTNVETISNNIANMSTTGYKRSRAEFQDLIYQNIRRVGASSSDTGT 60

Query: 65 KI 66
           I
Sbjct: 61 TI 62


>gi|333008275|gb|EGK27749.1| flagellar basal-body rod protein flgC [Shigella flexneri K-272]
          Length = 90

 Score = 55.7 bits (132), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 17/81 (20%), Positives = 29/81 (35%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            L+    IA S L  QS R+ + + N+ANA +     G     ++ +       G+   
Sbjct: 1  MALLNIFDIAGSALTAQSQRLNVAASNLANADSVTGPDGQPYRAKQVVFLVNAAPGAATG 60

Query: 62 RVKKIGVDQSTFVEEFDPGHP 82
           VK   V +      +     
Sbjct: 61 GVKVADVKKVRPRTNWFMNQV 81


>gi|163802601|ref|ZP_02196493.1| polar flagellar FlgG [Vibrio sp. AND4]
 gi|159173684|gb|EDP58503.1| polar flagellar FlgG [Vibrio sp. AND4]
          Length = 262

 Score = 55.7 bits (132), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 23/78 (29%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +   G       G                     +++  NVNV  E  +M E  
Sbjct: 179 FVNPGGLEPIGQNLYLPTGASGDPQEGVPGLDGLGEIRQSMLEASNVNVTEELVNMIEAQ 238

Query: 109 RLYMANLQTIKQSHDMMT 126
           R+Y  N + I     MM+
Sbjct: 239 RVYEMNSKVISSVDKMMS 256



 Score = 40.6 bits (93), Expect = 0.077,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 19/41 (46%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  +  ++ +GL  Q   +  IS N+ANA T G       +
Sbjct: 1  MHPALWVSKTGLDAQQTNIATISNNLANASTVGFKKSRAVF 41


>gi|170742325|ref|YP_001770980.1| flagellar basal-body rod protein FlgG [Methylobacterium sp. 4-46]
 gi|168196599|gb|ACA18546.1| flagellar basal-body rod protein FlgG [Methylobacterium sp. 4-46]
          Length = 263

 Score = 55.7 bits (132), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 18/128 (14%), Positives = 39/128 (30%), Gaps = 12/128 (9%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
            +  I+ SGL   +   Q   +N+               +      +  +   G     +
Sbjct: 147 TAVTISASGLVQATLPGQTAPQNL------------GQIQLARFVNKVGLESIGDNLFIE 194

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
                             +     ++  NVN + E + +    R Y  N + +  +  M+
Sbjct: 195 TQASGPAIQGNPGTEGFGSLQQSYLEEANVNAVTEISSLIAAQRAYEMNSKVVTAADQML 254

Query: 126 TTTLDLLR 133
           +TT  + R
Sbjct: 255 STTSQMFR 262



 Score = 34.8 bits (78), Expect = 3.9,   Method: Composition-based stats.
 Identities = 15/41 (36%), Positives = 24/41 (58%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          + + + A +G+A Q   +Q+IS NIAN RTTG       ++
Sbjct: 1  MRALYAAATGMAAQELNVQVISNNIANLRTTGYKRQQAHFQ 41


>gi|15895423|ref|NP_348772.1| flagellar hook protein FlgE [Clostridium acetobutylicum ATCC 824]
 gi|15025147|gb|AAK80112.1|AE007716_1 Flagellar hook protein FlgE [Clostridium acetobutylicum ATCC 824]
 gi|325509569|gb|ADZ21205.1| Flagellar hook protein FlgE [Clostridium acetobutylicum EA 2018]
          Length = 423

 Score = 55.7 bits (132), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/111 (25%), Positives = 49/111 (44%), Gaps = 2/111 (1%)

Query: 23  QIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHP 82
           QI   +  NA       G+  Y + + S  + M  SG    K      S+  +E + G  
Sbjct: 315 QIAMSSFTNAGGLEKEGGN--YVKPSASSGQPMVRSGAYSNKLDPTFISSAKKEDNSGGY 372

Query: 83  VANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
               SG ++  NV++  + +DM   +R Y AN + I  S +++   ++L R
Sbjct: 373 GKMYSGALEMSNVDLAQQFSDMIVASRAYQANGKIITTSDEILQDLVNLKR 423


>gi|283850788|ref|ZP_06368074.1| flagellar basal body rod protein [Desulfovibrio sp. FW1012B]
 gi|283573711|gb|EFC21685.1| flagellar basal body rod protein [Desulfovibrio sp. FW1012B]
          Length = 121

 Score = 55.7 bits (132), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 42/128 (32%), Gaps = 9/128 (7%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +  +  IA S L+     M                  +    R   +  E      GVRV
Sbjct: 1   MTDALSIAQSALSAMGTTMA--------VAANNVANAATDGYRSREARLETGPDGQGVRV 52

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
             I  D +        G P      +    +V++  +   M   +R + AN   I+ + D
Sbjct: 53  ADIAPD-APPAGLPAEGGPARPGVDLAAVSDVDLAGQVVSMTLASRTFEANAAVIRTADD 111

Query: 124 MMTTTLDL 131
           M  T LDL
Sbjct: 112 MAGTLLDL 119


>gi|256830199|ref|YP_003158927.1| hypothetical protein Dbac_2432 [Desulfomicrobium baculatum DSM
           4028]
 gi|256579375|gb|ACU90511.1| protein of unknown function DUF1078 domain protein
           [Desulfomicrobium baculatum DSM 4028]
          Length = 562

 Score = 55.7 bits (132), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 19/86 (22%), Positives = 34/86 (39%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
           T +    ++  GG    +            + G   + AS  ++  NV++  E   M  T
Sbjct: 477 TFNNNYALYREGGNLFSETRSSGPPITGLANTGGKGSIASNSLEQSNVDLATEFVKMITT 536

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            + + AN +TI     M+T  + L R
Sbjct: 537 EKGFQANSKTITTVDQMLTVLIQLKR 562


>gi|284989548|ref|YP_003408102.1| flagellar hook-basal body protein [Geodermatophilus obscurus DSM
           43160]
 gi|284062793|gb|ADB73731.1| flagellar hook-basal body protein [Geodermatophilus obscurus DSM
           43160]
          Length = 408

 Score = 55.7 bits (132), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/132 (15%), Positives = 46/132 (34%), Gaps = 11/132 (8%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
           + + +   I+ SG       M + S N+                  T +    +  +G  
Sbjct: 288 NAMGSLQSISLSG---DGTVMGVYSNNL--------REPIGKLALATFANPGGLAKAGNS 336

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
             +         + E   G   +  +G ++  NV++  E   +    R + AN + I  S
Sbjct: 337 SFRVGDNSGQPAIGEPGGGGRGSLVAGALEMSNVDLAEEFTGLIVAQRGFQANSRVISSS 396

Query: 122 HDMMTTTLDLLR 133
            +++   ++L R
Sbjct: 397 DEVLQDLVNLKR 408



 Score = 40.6 bits (93), Expect = 0.068,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 18/41 (43%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          ++ S + A SGL     ++ +   NIAN  T G       +
Sbjct: 1  MLRSMNSAISGLRAHQTKLDVTGNNIANVNTVGYKASQTVF 41


>gi|310816852|ref|YP_003964816.1| flagellar hook protein FlgE [Ketogulonicigenium vulgare Y25]
 gi|308755587|gb|ADO43516.1| flagellar hook protein FlgE [Ketogulonicigenium vulgare Y25]
          Length = 432

 Score = 55.7 bits (132), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 18/75 (24%), Positives = 29/75 (38%), Gaps = 1/75 (1%)

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIV-KYPNVNVLVETADMRETNRLYMANLQTI 118
           G +   +  D   F        P     G   +   V+V  E   M +T R Y +N + I
Sbjct: 358 GSQTYAVSQDSGAFFLWDAGAGPTGEMLGYASEGSAVDVATELTQMIQTQRAYSSNAKVI 417

Query: 119 KQSHDMMTTTLDLLR 133
           +   +M+  T +L R
Sbjct: 418 QTVDEMLQETTNLKR 432



 Score = 41.8 bits (96), Expect = 0.032,   Method: Composition-based stats.
 Identities = 20/125 (16%), Positives = 43/125 (34%), Gaps = 5/125 (4%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             + +S +   +GL+  + ++  IS+NIAN+ T G       +    I      + +GGV
Sbjct: 1   MSISSSMNAGVAGLSANANKLATISDNIANSSTNGYKRAQTEFYAMVIGSSSTKYTAGGV 60

Query: 62  RV--KKIGVDQSTFVEEFDPGHPVANASGIV---KYPNVNVLVETADMRETNRLYMANLQ 116
           R    ++  ++   V   +      +  G +       +           T   +  N  
Sbjct: 61  RTTATRVIDERGPLVSTSNATDIAISGRGFLPVTTLSAIEAGGALPFQMTTTGSFSPNAA 120

Query: 117 TIKQS 121
               +
Sbjct: 121 GYLTT 125


>gi|226225711|ref|YP_002759817.1| flagellar basal-body rod protein FlgG [Gemmatimonas aurantiaca
           T-27]
 gi|226088902|dbj|BAH37347.1| flagellar basal-body rod protein FlgG [Gemmatimonas aurantiaca
           T-27]
          Length = 262

 Score = 55.7 bits (132), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 21/48 (43%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
               ++  NV ++ E  +M    R Y  N + IK + +M     ++ R
Sbjct: 215 QQNSLEGSNVEIVQEMVEMIAAMRAYEINSKAIKTADEMGQIANNIAR 262



 Score = 39.9 bits (91), Expect = 0.11,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 18/39 (46%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSD 42
          +  +   A +G+  Q  R ++I+ N+AN  T G      
Sbjct: 1  MDPALRAAATGMMAQQTRTEVIAHNLANVNTPGFKRSRA 39


>gi|226313061|ref|YP_002772955.1| flagellar hook protein FlgE [Brevibacillus brevis NBRC 100599]
 gi|226096009|dbj|BAH44451.1| flagellar hook protein FlgE [Brevibacillus brevis NBRC 100599]
          Length = 272

 Score = 55.7 bits (132), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 15/86 (17%), Positives = 32/86 (37%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
               +++ +      V     D             V+  +G ++  NV++  E  +M   
Sbjct: 187 PGGLKKIGNNLYENTVNAGANDGDPMTPVTPADAKVSIIAGQLEMSNVDLSEEFTEMIVA 246

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R + AN + I  S  ++   ++L R
Sbjct: 247 QRGFQANSRIITTSDTVLEELVNLKR 272



 Score = 34.5 bits (77), Expect = 5.7,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 20/42 (47%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S +   SGL     ++ +I  NIAN  T G   G   ++
Sbjct: 1  MLRSMYSGISGLRGFQTKLDVIGNNIANVNTVGFKKGRVMFQ 42


>gi|90408062|ref|ZP_01216233.1| Flagellar basal body rod protein FlgG [Psychromonas sp. CNPT3]
 gi|90310819|gb|EAS38933.1| Flagellar basal body rod protein FlgG [Psychromonas sp. CNPT3]
          Length = 262

 Score = 55.7 bits (132), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/124 (16%), Positives = 40/124 (32%), Gaps = 3/124 (2%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            L+    I N  L++       +S  IA      +                 +   G   
Sbjct: 136 ALMPQIQIPNDALSISVGSEGEVSVRIA---GQVENQVVGQINVNDFVNPSGLEPMGENL 192

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
             + G   +                G+++  NVNV  E  ++ E+ R+Y  N + I    
Sbjct: 193 YTETGASGAPIQGVPGGDGLGFLRQGMLETSNVNVTEELVNLIESQRVYEMNSKVISAVD 252

Query: 123 DMMT 126
           +M++
Sbjct: 253 EMLS 256



 Score = 41.0 bits (94), Expect = 0.056,   Method: Composition-based stats.
 Identities = 18/108 (16%), Positives = 32/108 (29%), Gaps = 6/108 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +  +  I+ +GL  Q   +  IS N+ANA T G        + + I  + +         
Sbjct: 1   MHPALWISKTGLDAQQTNVATISNNLANASTVG------FKKSRAIFEDLLYQNINQPGA 54

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
                 +         G  V          N      + D+    R +
Sbjct: 55  NATQNTKLPSGLMIGAGAKVVAVQKNFSQGNALTTKNSLDIMIDGRGF 102


>gi|28897555|ref|NP_797160.1| flagellar basal body rod protein FlgG [Vibrio parahaemolyticus RIMD
           2210633]
 gi|91225875|ref|ZP_01260844.1| polar flagellar FlgG [Vibrio alginolyticus 12G01]
 gi|153839683|ref|ZP_01992350.1| flagellar basal-body rod protein FlgG [Vibrio parahaemolyticus
           AQ3810]
 gi|254230138|ref|ZP_04923533.1| flagellar basal-body rod protein FlgG [Vibrio sp. Ex25]
 gi|260364613|ref|ZP_05777215.1| flagellar basal-body rod protein FlgG [Vibrio parahaemolyticus
           K5030]
 gi|260878282|ref|ZP_05890637.1| flagellar basal-body rod protein FlgG [Vibrio parahaemolyticus
           AN-5034]
 gi|260898112|ref|ZP_05906608.1| flagellar basal-body rod protein FlgG [Vibrio parahaemolyticus
           Peru-466]
 gi|260901956|ref|ZP_05910351.1| flagellar basal-body rod protein FlgG [Vibrio parahaemolyticus
           AQ4037]
 gi|262394937|ref|YP_003286791.1| flagellar basal-body rod protein FlgG [Vibrio sp. Ex25]
 gi|269965422|ref|ZP_06179541.1| flagellar basal-body rod protein FlgG [Vibrio alginolyticus 40B]
 gi|5361010|gb|AAD42917.1|U12817_11 polar flagellar FlgG homolog [Vibrio parahaemolyticus]
 gi|28805767|dbj|BAC59044.1| polar flagellar FlgG [Vibrio parahaemolyticus RIMD 2210633]
 gi|91189525|gb|EAS75801.1| polar flagellar FlgG [Vibrio alginolyticus 12G01]
 gi|149746793|gb|EDM57781.1| flagellar basal-body rod protein FlgG [Vibrio parahaemolyticus
           AQ3810]
 gi|151937331|gb|EDN56194.1| flagellar basal-body rod protein FlgG [Vibrio sp. Ex25]
 gi|262338531|gb|ACY52326.1| flagellar basal-body rod protein FlgG [Vibrio sp. Ex25]
 gi|269829901|gb|EEZ84131.1| flagellar basal-body rod protein FlgG [Vibrio alginolyticus 40B]
 gi|308086113|gb|EFO35808.1| flagellar basal-body rod protein FlgG [Vibrio parahaemolyticus
           Peru-466]
 gi|308090170|gb|EFO39865.1| flagellar basal-body rod protein FlgG [Vibrio parahaemolyticus
           AN-5034]
 gi|308106768|gb|EFO44308.1| flagellar basal-body rod protein FlgG [Vibrio parahaemolyticus
           AQ4037]
 gi|308115105|gb|EFO52645.1| flagellar basal-body rod protein FlgG [Vibrio parahaemolyticus
           K5030]
 gi|328473451|gb|EGF44299.1| flagellar basal body rod protein FlgG [Vibrio parahaemolyticus
           10329]
          Length = 262

 Score = 55.7 bits (132), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 23/78 (29%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +   G       G                     +++  NVNV  E  +M E  
Sbjct: 179 FVNPGGLEPIGQNLYLPTGASGDPQEGVPGLDGLGEIRQSMLEASNVNVTEELVNMIEAQ 238

Query: 109 RLYMANLQTIKQSHDMMT 126
           R+Y  N + I     MM+
Sbjct: 239 RVYEMNSKVISSVDKMMS 256



 Score = 40.6 bits (93), Expect = 0.065,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 19/41 (46%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  +  ++ +GL  Q   +  IS N+ANA T G       +
Sbjct: 1  MHPALWVSKTGLDAQQTNIATISNNLANASTVGYKKSRAVF 41


>gi|330447905|ref|ZP_08311553.1| flagellar basal-body rod protein FlgG [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
 gi|328492096|dbj|GAA06050.1| flagellar basal-body rod protein FlgG [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
          Length = 261

 Score = 55.7 bits (132), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 26/78 (33%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                  +   GG   K+                  +   G ++  NV V+ E  DM  T
Sbjct: 177 KFINPAGLEAVGGNLYKETQASGQAQEIIAGTDGAGSLKQGALEGSNVQVVEEMVDMITT 236

Query: 108 NRLYMANLQTIKQSHDMM 125
            R Y  N + +  + DM+
Sbjct: 237 QRAYEMNAKVVSAADDML 254



 Score = 40.6 bits (93), Expect = 0.068,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 21/41 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          + ++  ++ +G+A Q  +M  IS N+AN  T G       +
Sbjct: 1  MHSALWVSKTGMAAQDTKMTAISNNLANVNTVGFKRDRVVF 41


>gi|84502379|ref|ZP_01000515.1| flagellar basal body rod protein FlgG [Oceanicola batsensis
           HTCC2597]
 gi|84389191|gb|EAQ01988.1| flagellar basal body rod protein FlgG [Oceanicola batsensis
           HTCC2597]
          Length = 261

 Score = 55.7 bits (132), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 15/84 (17%), Positives = 29/84 (34%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
           T   +  M   G   +                        G ++  NVN++ +  D+   
Sbjct: 177 TFINDAGMRPLGNNLLAATVASGDPTQANPGDPAVGILRQGYLETSNVNIIQQITDLISA 236

Query: 108 NRLYMANLQTIKQSHDMMTTTLDL 131
            R Y  N ++I+ +  MM+T   +
Sbjct: 237 QRAYEMNSKSIETADQMMSTANQI 260



 Score = 41.0 bits (94), Expect = 0.050,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 22/41 (53%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          + +  IA +G+  Q   + +IS NIANA TTG       ++
Sbjct: 1  MKALGIAATGMMAQQTNVDVISNNIANASTTGFKSARASFQ 41


>gi|46578927|ref|YP_009735.1| flagellar basal-body rod protein [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120603472|ref|YP_967872.1| hypothetical protein Dvul_2429 [Desulfovibrio vulgaris DP4]
 gi|46448339|gb|AAS94994.1| flagellar basal-body rod protein, putative [Desulfovibrio vulgaris
           str. Hildenborough]
 gi|120563701|gb|ABM29445.1| protein of unknown function DUF1078 domain protein [Desulfovibrio
           vulgaris DP4]
 gi|311232785|gb|ADP85639.1| flagellar basal-body rod protein FlgF [Desulfovibrio vulgaris RCH1]
          Length = 260

 Score = 55.7 bits (132), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 18/107 (16%), Positives = 38/107 (35%), Gaps = 1/107 (0%)

Query: 28  NIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANAS 87
           N+  A             +  +     + G   +      + + +   E   G  V  + 
Sbjct: 152 NLQVASDGRIAVDGVDVGQLQVVTVSDLEGLEKLGGNLYRLREGSTAGEVPVGPDVIVSQ 211

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD-LLR 133
           G ++  NV V+ E  +M ET R + A  + ++ S  +    +  + R
Sbjct: 212 GYIETSNVEVVNEMVNMIETQRQFEAYQKVMQTSDTVDRDAITKIGR 258


>gi|27363703|ref|NP_759231.1| flagellar basal body rod protein FlgG [Vibrio vulnificus CMCP6]
 gi|37679149|ref|NP_933758.1| flagellar basal body rod protein FlgG [Vibrio vulnificus YJ016]
 gi|320157107|ref|YP_004189486.1| flagellar basal-body rod protein FlgG [Vibrio vulnificus MO6-24/O]
 gi|27359819|gb|AAO08758.1| flagellar basal-body rod protein FlgG [Vibrio vulnificus CMCP6]
 gi|37197891|dbj|BAC93729.1| flagellar basal body rod protein FlgG [Vibrio vulnificus YJ016]
 gi|319932419|gb|ADV87283.1| flagellar basal-body rod protein FlgG [Vibrio vulnificus MO6-24/O]
          Length = 262

 Score = 55.7 bits (132), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 23/78 (29%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +   G       G                     +++  NVNV  E  +M E  
Sbjct: 179 FVNPGGLEPIGQNLYLPTGASGDPQEGVPGLDGLGEVRQSMLETSNVNVTEELVNMIEAQ 238

Query: 109 RLYMANLQTIKQSHDMMT 126
           R+Y  N + I     MM+
Sbjct: 239 RVYEMNSKVISSVDKMMS 256



 Score = 42.2 bits (97), Expect = 0.026,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  +  ++ +GL  Q   +  IS N+ANA T G   G   +
Sbjct: 1  MHPALWVSKTGLDAQQTNIATISNNLANASTIGFKKGRAVF 41


>gi|297618421|ref|YP_003703580.1| flagellar basal-body rod protein FlgF [Syntrophothermus lipocalidus
           DSM 12680]
 gi|297146258|gb|ADI03015.1| flagellar basal-body rod protein FlgF [Syntrophothermus lipocalidus
           DSM 12680]
          Length = 256

 Score = 55.7 bits (132), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 8/44 (18%), Positives = 19/44 (43%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            G ++  NV  + E  ++    R Y AN + ++     +   ++
Sbjct: 208 QGYLELSNVVAVKEMVELISVLRAYEANQKVVQAHDQTLDAAIN 251



 Score = 37.2 bits (84), Expect = 0.76,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 35/85 (41%), Gaps = 3/85 (3%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I   + A SG+ +Q A+  +I+ N+ANA T G           T   + +++  G V+V
Sbjct: 1  MIRGLYTACSGMLLQLAKQDVIANNLANASTPGFKKD---LAVCTAFPDMMINRLGEVKV 57

Query: 64 KKIGVDQSTFVEEFDPGHPVANASG 88
               +    V     G   A  + 
Sbjct: 58 VAGKEEPIPPVAIGRLGTGAAIQTI 82


>gi|254780378|ref|YP_003064791.1| flagellar basal body rod protein FlgG [Candidatus Liberibacter
           asiaticus str. psy62]
 gi|254040055|gb|ACT56851.1| flagellar basal body rod protein FlgG [Candidatus Liberibacter
           asiaticus str. psy62]
          Length = 262

 Score = 55.7 bits (132), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 14/76 (18%), Positives = 28/76 (36%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
              E  +   G   + +  V     +   D         G ++  NV+ + E ++M    
Sbjct: 179 FINEAGLRNIGDNLLARTSVSGDPIISNPDDIGFAHVKQGYLEASNVDAVKEISEMISAQ 238

Query: 109 RLYMANLQTIKQSHDM 124
           R Y  N + I+ + +M
Sbjct: 239 RAYEMNSKVIEAADEM 254


>gi|294679031|ref|YP_003579646.1| flagellar basal-body rod protein FlgG [Rhodobacter capsulatus SB
           1003]
 gi|294477851|gb|ADE87239.1| flagellar basal-body rod protein FlgG [Rhodobacter capsulatus SB
           1003]
          Length = 261

 Score = 55.7 bits (132), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 12/82 (14%), Positives = 29/82 (35%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            + E+ +   G     +     +  V             G ++  +V+ + E  ++ +  
Sbjct: 178 FTNEKGLEAIGSNLFLETEASGAPTVAAPGTDGLGVIKQGYLEESSVDAVREITELIKAQ 237

Query: 109 RLYMANLQTIKQSHDMMTTTLD 130
           R Y  N + I  + +M+  T  
Sbjct: 238 RGYEMNAKVITAADEMLQATTQ 259



 Score = 44.9 bits (104), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 23/41 (56%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          + +  IA +G++ Q  R+++IS N+AN  TTG       + 
Sbjct: 1  MRALQIAATGMSAQQMRVEVISNNLANMSTTGYNARRAEFA 41


>gi|226950067|ref|YP_002805158.1| flagellar hook protein FlgE [Clostridium botulinum A2 str. Kyoto]
 gi|226841875|gb|ACO84541.1| flagellar hook protein FlgE [Clostridium botulinum A2 str. Kyoto]
          Length = 334

 Score = 55.7 bits (132), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/129 (17%), Positives = 45/129 (34%), Gaps = 5/129 (3%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           + S  I   GL V S      +     A  +    G           + +   S      
Sbjct: 211 VQSFTIDKDGLIVASLVDGTSAALGQIAMASFKNEGG-----LEKMGKNLYRNSANSGEA 265

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
            I   + T  ++ +        +G+++  NV++  E  +M   NR + A  + I    ++
Sbjct: 266 IIRSGRGTDADKDNSKGYGDMLNGMIEMSNVDLAEEFTEMIVANRAFQACGKMITTGDEI 325

Query: 125 MTTTLDLLR 133
           +   ++L R
Sbjct: 326 LQELVNLKR 334



 Score = 41.8 bits (96), Expect = 0.035,   Method: Composition-based stats.
 Identities = 15/42 (35%), Positives = 22/42 (52%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S +   SGL  Q  R+ I+  NIANA TT     S  ++
Sbjct: 1  MLRSMYSGISGLKAQQTRLDIVGNNIANANTTAFKSQSIRFQ 42


>gi|239817165|ref|YP_002946075.1| flagellar basal body FlaE domain protein [Variovorax paradoxus
           S110]
 gi|239803742|gb|ACS20809.1| flagellar basal body FlaE domain protein [Variovorax paradoxus
           S110]
          Length = 404

 Score = 55.7 bits (132), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 23/42 (54%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           ++  NV++  E  ++    R Y AN QT+K    ++ T +++
Sbjct: 362 LEASNVDLTSELVNLIVAQRSYQANAQTVKTQDQVVQTLINI 403



 Score = 34.1 bits (76), Expect = 6.5,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 20/39 (51%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
                SGL+  +A + +I  NIAN+ T G   G+  ++
Sbjct: 2  GFSQGISGLSAAAANLDVIGNNIANSGTVGFKSGAATFQ 40


>gi|302387788|ref|YP_003823610.1| fagellar hook-basal body protein [Clostridium saccharolyticum WM1]
 gi|302198416|gb|ADL05987.1| fagellar hook-basal body protein [Clostridium saccharolyticum WM1]
          Length = 533

 Score = 55.3 bits (131), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 22/46 (47%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             ++   V++  E  +M  T R + AN + I  +  M+   +++ R
Sbjct: 488 NYLEQAKVDLATEMTEMITTQRGFQANSKIITVTDQMLDELVNMKR 533


>gi|89069818|ref|ZP_01157153.1| flagellar basal-body rod protein FlgG [Oceanicola granulosus
           HTCC2516]
 gi|89044619|gb|EAR50735.1| flagellar basal-body rod protein FlgG [Oceanicola granulosus
           HTCC2516]
          Length = 261

 Score = 55.3 bits (131), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 14/82 (17%), Positives = 26/82 (31%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            S    +   G     +        V             G ++  +V+ + E  D+ E  
Sbjct: 178 FSNPRGLEAVGSNLFVETEASGPANVTTPGQDGLGTLRQGFLEDSSVDAVKEVTDLIEAQ 237

Query: 109 RLYMANLQTIKQSHDMMTTTLD 130
           R Y  N + I  +  M+  T+ 
Sbjct: 238 RGYELNSKVISAADQMLGATVQ 259



 Score = 46.8 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 23/51 (45%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVM 55
          + +  IA +G++ Q  R+++IS N+AN  TTG       +           
Sbjct: 1  MRALKIAATGMSAQQMRVEVISNNLANMNTTGYNARRAEFADLHYQQMMRP 51


>gi|306845419|ref|ZP_07477993.1| flagellar hook protein FlgE [Brucella sp. BO1]
 gi|306274162|gb|EFM55978.1| flagellar hook protein FlgE [Brucella sp. BO1]
          Length = 396

 Score = 55.3 bits (131), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 37/111 (33%), Gaps = 2/111 (1%)

Query: 25  ISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVA 84
           +  + A      +      YR    +       +       +   +S  V    P     
Sbjct: 286 VGNDGAVVAVYENGTQKVLYRIPLANVASPDRMTVVSGNVFLPSAESGDVRLGFPRGDGM 345

Query: 85  N--ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
               SG ++  N ++  E  DM E  R Y AN +  +   ++M   ++L R
Sbjct: 346 GKIMSGTLEESNADIAQELTDMIEAQRSYTANSKVFQTGSELMDVLVNLKR 396



 Score = 44.5 bits (103), Expect = 0.004,   Method: Composition-based stats.
 Identities = 18/90 (20%), Positives = 30/90 (33%), Gaps = 2/90 (2%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG- 60
            L        SG+  Q+ R+  +++NIANA T G       +    +      + SG  
Sbjct: 1  MSLYGMMRTGVSGMNAQANRLSTVADNIANASTVGYKRAETQFSSLVLPSTAGQYNSGSV 60

Query: 61 -VRVKKIGVDQSTFVEEFDPGHPVANASGI 89
             V+    DQ              + +G 
Sbjct: 61 LTDVRYGISDQGGIRSTSSTTDLAIDGNGY 90


>gi|212709494|ref|ZP_03317622.1| hypothetical protein PROVALCAL_00536 [Providencia alcalifaciens DSM
           30120]
 gi|212687832|gb|EEB47360.1| hypothetical protein PROVALCAL_00536 [Providencia alcalifaciens DSM
           30120]
          Length = 260

 Score = 55.3 bits (131), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 28/85 (32%)

Query: 47  KTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
            T   +  +   G     +     +                G+++  NVNV  E  +M +
Sbjct: 176 TTFINDAGLESMGENLYMETASSGAPNESAPGTNGAGLLYQGMLETSNVNVAEELVNMIQ 235

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDL 131
           T R Y  N + +  S  M+     L
Sbjct: 236 TQRAYEINSKAVSASDQMLQRLTQL 260



 Score = 41.4 bits (95), Expect = 0.047,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 20/41 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I S  IA +GL  Q   + +IS N+AN  T G       +
Sbjct: 1  MIRSLWIAKTGLDAQQTNLDVISNNLANVSTNGFKRQRAVF 41


>gi|328948413|ref|YP_004365750.1| flagellar hook-basal body protein [Treponema succinifaciens DSM
           2489]
 gi|328448737|gb|AEB14453.1| flagellar hook-basal body protein [Treponema succinifaciens DSM
           2489]
          Length = 463

 Score = 55.3 bits (131), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/105 (19%), Positives = 38/105 (36%)

Query: 29  IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASG 88
           I    + G           + + +  +   G     +        + E       +  SG
Sbjct: 359 ITGVYSNGSVRTIGQVAMASFTNQGGLEKKGDNTYAESINSGMANIGESGTQGKGSMLSG 418

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NV++  +  DM  T R + +N +TI+    M+ T L L R
Sbjct: 419 TLEMSNVDLTEQLTDMIVTQRGFESNAKTIQTGDSMLETVLGLKR 463



 Score = 38.7 bits (88), Expect = 0.31,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 20/42 (47%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S +   SGL     RM +I  NI+N  T G   G   ++
Sbjct: 1  MMRSLYAGVSGLQNHQTRMDVIGNNISNVNTYGFKKGRATFQ 42


>gi|149188068|ref|ZP_01866363.1| polar flagellar FlgG [Vibrio shilonii AK1]
 gi|148838056|gb|EDL54998.1| polar flagellar FlgG [Vibrio shilonii AK1]
          Length = 262

 Score = 55.3 bits (131), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 15/76 (19%), Positives = 23/76 (30%)

Query: 55  MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
           +   G       G                     +++  NVNV  E  +M E  R+Y  N
Sbjct: 185 LEPIGQNLYLPTGASGDPNEGVPGLDGFGQIRQSMLETSNVNVTEELVNMIEAQRVYEMN 244

Query: 115 LQTIKQSHDMMTTTLD 130
            + I     MM+    
Sbjct: 245 SKVISSVDKMMSFANQ 260



 Score = 40.2 bits (92), Expect = 0.089,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 19/41 (46%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  +  ++ +GL  Q   +  IS N+ANA T G       +
Sbjct: 1  MHPALWVSKTGLDAQQTNISTISNNLANASTIGYKKSRAVF 41


>gi|154250212|ref|YP_001411037.1| hypothetical protein Fnod_1537 [Fervidobacterium nodosum Rt17-B1]
 gi|154154148|gb|ABS61380.1| protein of unknown function DUF1078 domain protein
           [Fervidobacterium nodosum Rt17-B1]
          Length = 770

 Score = 55.3 bits (131), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 22/44 (50%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  NV++  E   +    R + AN +TI  +  ++   ++L R
Sbjct: 727 LEMSNVDLSEEFTKLIIAQRGFQANARTITTADQILQEVVNLRR 770



 Score = 35.6 bits (80), Expect = 2.5,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 26/69 (37%), Gaps = 4/69 (5%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR----RKTISFEEVMHGSG 59
          ++ S +   SGL      + ++S NI+N  T G       Y     +           +G
Sbjct: 1  MMRSLYSGVSGLQGFQQEIDVVSNNISNVNTIGFKGARVTYATNFSQILDMSRRATDNTG 60

Query: 60 GVRVKKIGV 68
          G   K+IG 
Sbjct: 61 GTNPKQIGY 69


>gi|120554033|ref|YP_958384.1| hypothetical protein Maqu_1105 [Marinobacter aquaeolei VT8]
 gi|120323882|gb|ABM18197.1| protein of unknown function DUF1078 domain protein [Marinobacter
           aquaeolei VT8]
          Length = 637

 Score = 55.3 bits (131), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 16/83 (19%), Positives = 33/83 (39%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +  + +   G     +        +   D G   +  +  V+  NV++  E  ++    
Sbjct: 554 FNNTDGLSPVGDTTWVETFESGQPVIGAPDTGTLGSIKASSVEDSNVDLSAELVNLIIAQ 613

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y AN +TI+ S  +  T ++L
Sbjct: 614 RNYQANAKTIETSDAVTQTIINL 636



 Score = 35.6 bits (80), Expect = 2.4,   Method: Composition-based stats.
 Identities = 11/30 (36%), Positives = 15/30 (50%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTG 36
          + +   SGL   S  + +   NIANA T G
Sbjct: 2  AFNTGLSGLRAASVDLDVTGNNIANASTVG 31


>gi|294084418|ref|YP_003551176.1| hypothetical protein SAR116_0849 [Candidatus Puniceispirillum marinum
            IMCC1322]
 gi|292663991|gb|ADE39092.1| hypothetical protein SAR116_0849 [Candidatus Puniceispirillum marinum
            IMCC1322]
          Length = 1575

 Score = 55.3 bits (131), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 14/83 (16%), Positives = 33/83 (39%)

Query: 49   ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
             + +  +   G     +  V  +  V E          SG ++  NV++  E  ++    
Sbjct: 1491 FNNQNGLKQIGNATYVETAVSGTPQVGEAGAEGFGNILSGSLERSNVDITEELVNLITAQ 1550

Query: 109  RLYMANLQTIKQSHDMMTTTLDL 131
            R Y A+ + I+ +  +  T +++
Sbjct: 1551 RNYQASAKAIETTTGLTQTIINI 1573


>gi|238916189|ref|YP_002929706.1| flagellar basal-body rod protein FlgG [Eubacterium eligens ATCC
           27750]
 gi|238871549|gb|ACR71259.1| flagellar basal-body rod protein FlgG [Eubacterium eligens ATCC
           27750]
          Length = 256

 Score = 55.3 bits (131), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 22/46 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             G ++  N+NV+ E  DM    R + +N + +    +M+   + +
Sbjct: 208 NQGYLEASNINVVTEMVDMISIARDFESNQKIMNTIDEMLGKMVSI 253



 Score = 42.2 bits (97), Expect = 0.022,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 1/66 (1%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGD-TPGSDPYRRKTISFEEVMHGSGGVR 62
          ++   + A SGL VQ  R+ ++S N+ANA TTG    G      K +   +V   + G  
Sbjct: 1  MVKGLYTAYSGLTVQQKRLDVVSNNLANATTTGYKKEGLTTQSFKDVYGIKVKDETVGYI 60

Query: 63 VKKIGV 68
           + IG 
Sbjct: 61 NQNIGT 66


>gi|302338303|ref|YP_003803509.1| flagellar basal-body rod protein FlgF [Spirochaeta smaragdinae DSM
           11293]
 gi|301635488|gb|ADK80915.1| flagellar basal-body rod protein FlgF [Spirochaeta smaragdinae DSM
           11293]
          Length = 282

 Score = 55.3 bits (131), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 27/65 (41%)

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           I  +++    +   G       G ++  NVN + E   M E NR Y AN + ++    + 
Sbjct: 213 IAPEEAGASNQVALGSETKVVQGFLEGSNVNSVTEMVRMIEVNRAYEANQKAMQTHDALT 272

Query: 126 TTTLD 130
              ++
Sbjct: 273 GRLIN 277



 Score = 41.4 bits (95), Expect = 0.047,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 25/85 (29%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++   +   SG+  Q  RM  IS N+AN    G        +         M+  G    
Sbjct: 1  MVRGIYTGASGMVDQMHRMDAISNNLANVDLVGYKRDQSVSKAFPQMLIRRMNDDGVYSF 60

Query: 64 KKIGVDQSTFVEEFDPGHPVANASG 88
               D +  V     G     +  
Sbjct: 61 PFGSADTAPVVGMIGTGVEYNESFT 85


>gi|153837069|ref|ZP_01989736.1| flagellar basal-body rod protein FlgG [Vibrio parahaemolyticus
           AQ3810]
 gi|149749657|gb|EDM60402.1| flagellar basal-body rod protein FlgG [Vibrio parahaemolyticus
           AQ3810]
          Length = 261

 Score = 55.3 bits (131), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 26/78 (33%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                  +   GG   ++                  +   G ++  NV V+ E  DM  T
Sbjct: 177 KFINPAGLEAVGGNLFRETEASGPADELIAGADGAGSIKQGALEGSNVQVVEEMVDMITT 236

Query: 108 NRLYMANLQTIKQSHDMM 125
            R Y  N + +  + DM+
Sbjct: 237 QRAYEMNAKVVSAADDML 254



 Score = 41.4 bits (95), Expect = 0.039,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 29/68 (42%), Gaps = 4/68 (5%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          + ++  ++ +G+A Q  +M +IS N+AN  T G       +          +    G +V
Sbjct: 1  MHSALWVSKTGMAAQDTKMTVISNNLANVNTVGFKRDRVVF----EDLFYSIQRQPGAQV 56

Query: 64 KKIGVDQS 71
           ++    S
Sbjct: 57 DQVNELPS 64


>gi|118588711|ref|ZP_01546119.1| Flagellar basal-body rod FlgG [Stappia aggregata IAM 12614]
 gi|118438697|gb|EAV45330.1| Flagellar basal-body rod FlgG [Stappia aggregata IAM 12614]
          Length = 260

 Score = 55.3 bits (131), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 20/116 (17%), Positives = 39/116 (33%), Gaps = 2/116 (1%)

Query: 18  QSARMQIISEN--IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVE 75
           Q+ +   IS    +      G+T      +      +  +   G     +     +    
Sbjct: 144 QTVKDVTISNTGVVQGVDQAGNTVQLGQIQLARFVNKAGLEAIGDNLYLETDASGAPETS 203

Query: 76  EFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
                         ++  NV+ + E AD+    R Y  N Q I+ + +M +TT +L
Sbjct: 204 NPGDESYGTVQQYFLEMANVDAVTEIADLISAQRAYEMNSQIIQAADEMYSTTTNL 259



 Score = 39.1 bits (89), Expect = 0.24,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 24/41 (58%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          + + HIA +G+  Q   +++IS N+AN RTTG       ++
Sbjct: 1  MKALHIAATGMKAQELNVEVISNNVANMRTTGFKKQRADFQ 41


>gi|320529456|ref|ZP_08030543.1| fagellar hook-basal body protein [Selenomonas artemidis F0399]
 gi|320138293|gb|EFW30188.1| fagellar hook-basal body protein [Selenomonas artemidis F0399]
          Length = 661

 Score = 55.3 bits (131), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 15/74 (20%), Positives = 33/74 (44%)

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           G  + +   +      +      V+     ++  NVN+  + +DM  T R + +N + I 
Sbjct: 588 GGSLYQESNNSGPANIKTANDLGVSMTPSALEMSNVNIADQFSDMIITQRGFQSNSKIIT 647

Query: 120 QSHDMMTTTLDLLR 133
            S +M+ T +++ R
Sbjct: 648 VSDEMLETLINMKR 661


>gi|171059412|ref|YP_001791761.1| hypothetical protein Lcho_2731 [Leptothrix cholodnii SP-6]
 gi|170776857|gb|ACB34996.1| protein of unknown function DUF1078 domain protein [Leptothrix
           cholodnii SP-6]
          Length = 501

 Score = 55.3 bits (131), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 22/84 (26%), Positives = 35/84 (41%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
               + +   GG          S  V   D G+     SG ++  NV++  E  +M    
Sbjct: 418 FRNPQGLQAVGGNAWASTFASGSATVGTPDSGNFGQLQSGSLEDSNVDLTAELVNMITAQ 477

Query: 109 RLYMANLQTIKQSHDMMTTTLDLL 132
           R+Y AN QTIK    ++ T ++L 
Sbjct: 478 RVYQANAQTIKTQDSVLQTLVNLK 501


>gi|262173356|ref|ZP_06041033.1| flagellar basal-body rod protein FlgG [Vibrio mimicus MB-451]
 gi|261890714|gb|EEY36701.1| flagellar basal-body rod protein FlgG [Vibrio mimicus MB-451]
          Length = 250

 Score = 55.3 bits (131), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 21/110 (19%), Positives = 37/110 (33%), Gaps = 7/110 (6%)

Query: 23  QIISENIANARTTGDTPGSDPYRRK-------TISFEEVMHGSGGVRVKKIGVDQSTFVE 75
            ++S +I    T   T   DP  ++              +   GG   ++          
Sbjct: 134 NVVSLSIGVDGTVSATTAGDPAPQQLGQITLAKFINPAGLEAVGGNLFRETDASGLAEEL 193

Query: 76  EFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
                   +   G ++  NV V+ E  DM  T R Y  N + +  + DM+
Sbjct: 194 VAGQDGTGSIKQGALEGSNVQVVEEMVDMITTQRAYEMNAKVVSATDDML 243


>gi|237817502|ref|ZP_04596493.1| flagellar hook protein FlgE [Brucella abortus str. 2308 A]
 gi|237787337|gb|EEP61554.1| flagellar hook protein FlgE [Brucella abortus str. 2308 A]
          Length = 456

 Score = 55.3 bits (131), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 37/111 (33%), Gaps = 2/111 (1%)

Query: 25  ISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVA 84
           +  + A      +      YR    +       +       +   +S  V    P     
Sbjct: 346 VGNDGAVVAVYENGTQKVLYRIPLANVASPDRMTVVSGNIFLPSAESGDVRLGFPQGDGM 405

Query: 85  N--ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
               SG ++  N ++  E  DM E  R Y AN +  +   ++M   ++L R
Sbjct: 406 GKIMSGTLEESNADIAQELTDMIEAQRSYTANSKVFQTGFELMDVLVNLKR 456



 Score = 46.0 bits (107), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/90 (20%), Positives = 30/90 (33%), Gaps = 2/90 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG- 60
             L        SG+  Q+ R+  +++NIANA T G       +    +      + SG  
Sbjct: 61  MSLYGMMRTGVSGMNAQANRLSTVADNIANASTVGYKRAETQFSSLVLPSTAGQYNSGSV 120

Query: 61  -VRVKKIGVDQSTFVEEFDPGHPVANASGI 89
              V+    DQ              + +G 
Sbjct: 121 LTDVRYGISDQGGIRSTSSTTDLAIDGNGY 150


>gi|329929265|ref|ZP_08283018.1| flagellar hook-basal body protein [Paenibacillus sp. HGF5]
 gi|328936634|gb|EGG33077.1| flagellar hook-basal body protein [Paenibacillus sp. HGF5]
          Length = 274

 Score = 55.3 bits (131), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 43/119 (36%), Gaps = 9/119 (7%)

Query: 24  IISENIANAR--TTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQST-------FV 74
            I++N A  +  + G T          I   E +   GG   +               F 
Sbjct: 156 TIAQNGAIIQKMSDGTTEEGAIIGVAKIPNPEGLEKIGGNMYRVTLNAVPDGDLAAVMFD 215

Query: 75  EEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
                    A  +G ++  NV++  E ++M    R + AN + I  S +++   ++L R
Sbjct: 216 GNNAEEGTGAIIAGQLEMSNVDLTGEFSEMIVAQRGFQANSRIITTSDEVLQEVVNLKR 274



 Score = 36.8 bits (83), Expect = 1.1,   Method: Composition-based stats.
 Identities = 19/73 (26%), Positives = 31/73 (42%), Gaps = 5/73 (6%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY-----RRKTISFEEVMHGS 58
          ++ S +   SG+     ++ +I  NIAN  T G   G   +     +  +         S
Sbjct: 1  MLRSMYSGISGMRGFQTKLDVIGNNIANVNTVGFKAGRVMFKDILSQTMSGVTPGTDDPS 60

Query: 59 GGVRVKKIGVDQS 71
          GGV  K+IG+  S
Sbjct: 61 GGVNAKQIGLGVS 73


>gi|13472592|ref|NP_104159.1| flagellar hook protein FlgE [Mesorhizobium loti MAFF303099]
 gi|14023338|dbj|BAB49945.1| flagellar hook protein; FlgE [Mesorhizobium loti MAFF303099]
          Length = 418

 Score = 55.3 bits (131), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 22/44 (50%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  NV++  E  DM    R Y AN +  +   D+M   ++L R
Sbjct: 375 LENSNVDIAEELTDMIAAQRSYTANSKVFQTGSDLMDVLVNLKR 418



 Score = 45.2 bits (105), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 29/77 (37%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            L        SG+  Q+ R+   ++NIAN+ TTG    S  +    +      + SGGV
Sbjct: 1  MSLYGMMRTGVSGMNAQANRLSTTADNIANSDTTGYKRSSAEFSTLIMPSTGGAYNSGGV 60

Query: 62 RVKKIGVDQSTFVEEFD 78
                      V ++ 
Sbjct: 61 TTTIRQAVSDPGVLQYT 77


>gi|311694361|gb|ADP97234.1| flagellar hook protein FlgE [marine bacterium HP15]
          Length = 632

 Score = 55.3 bits (131), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 16/83 (19%), Positives = 32/83 (38%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +    +   G     +        +   D G   +  +  V+  NV++  E  ++    
Sbjct: 549 FNNTNGLSPVGDTSWVETFESGQPIIGAPDTGTLGSIKASSVEESNVDLSAELVNLIIAQ 608

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y AN +TI+ S  +  T ++L
Sbjct: 609 RNYQANAKTIETSDAVTQTIINL 631



 Score = 35.2 bits (79), Expect = 3.0,   Method: Composition-based stats.
 Identities = 11/30 (36%), Positives = 15/30 (50%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTG 36
          + +   SGL   S  + +   NIANA T G
Sbjct: 2  AFNTGLSGLRAASVDLDVTGNNIANASTVG 31


>gi|89056684|ref|YP_512135.1| flagellar basal body rod protein FlgG [Jannaschia sp. CCS1]
 gi|88866233|gb|ABD57110.1| flagellar basal-body rod protein FlgG [Jannaschia sp. CCS1]
          Length = 261

 Score = 55.3 bits (131), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 34/115 (29%)

Query: 16  AVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVE 75
             Q   +    E  A+ R                + +  +   G     + G   +    
Sbjct: 145 DAQEITINANGEVFASFRGEIQPQLLGQLNMVRFTNDNGLEAIGSNLFLETGASGAPLAG 204

Query: 76  EFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           +           G V+  +V+ + E  D+ E  R Y  N + +  +  ++  T  
Sbjct: 205 DPGEDGMGTFRQGYVEQSSVDAVREITDLIEAQRGYELNAKVLTAADQILGATTQ 259



 Score = 50.3 bits (118), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 25/62 (40%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          + +  IA +G++ Q  R+ +IS NIAN  TTG +P    +                    
Sbjct: 1  MRALDIAATGMSAQQLRVDVISNNIANMSTTGYSPRRADFADLHYQQMVRAGAINASDGT 60

Query: 65 KI 66
           +
Sbjct: 61 VV 62


>gi|313650476|gb|EFS14883.1| flagellar basal-body rod protein flgC [Shigella flexneri 2a str.
          2457T]
 gi|332758232|gb|EGJ88555.1| flagellar basal-body rod protein flgC [Shigella flexneri 4343-70]
 gi|332759647|gb|EGJ89952.1| flagellar basal-body rod protein flgC [Shigella flexneri 2747-71]
 gi|332761418|gb|EGJ91702.1| flagellar basal-body rod protein flgC [Shigella flexneri K-671]
 gi|332767680|gb|EGJ97873.1| flagella basal body rod family protein [Shigella flexneri
          2930-71]
 gi|333004882|gb|EGK24402.1| flagellar basal-body rod protein flgC [Shigella flexneri VA-6]
 gi|333005639|gb|EGK25157.1| flagellar basal-body rod protein flgC [Shigella flexneri K-218]
 gi|333019455|gb|EGK38738.1| flagellar basal-body rod protein flgC [Shigella flexneri K-304]
 gi|333019765|gb|EGK39037.1| flagellar basal-body rod protein flgC [Shigella flexneri K-227]
          Length = 90

 Score = 55.3 bits (131), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 17/81 (20%), Positives = 29/81 (35%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            L+    IA S L  QS R+ + + N+ANA +     G     ++ +       G+   
Sbjct: 1  MALLNIFDIAGSALTAQSQRLNVAASNLANADSVTGPDGQPYRAKQVVFQVNAAPGAATG 60

Query: 62 RVKKIGVDQSTFVEEFDPGHP 82
           VK   V +      +     
Sbjct: 61 GVKVADVKKVRPRTNWFMNQV 81


>gi|149912834|ref|ZP_01901368.1| flagellar basal-body rod protein FlgG [Roseobacter sp. AzwK-3b]
 gi|149813240|gb|EDM73066.1| flagellar basal-body rod protein FlgG [Roseobacter sp. AzwK-3b]
          Length = 261

 Score = 55.3 bits (131), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 20/128 (15%), Positives = 39/128 (30%), Gaps = 3/128 (2%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            L+    I      V+S  +    E  A    T +            S  + +  +G   
Sbjct: 135 SLVPEITIPAD---VRSISINAAGEVFAYFAETTEAQQIGEITLAGFSNPKGLEAAGNNL 191

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
             +      + V             G ++  +V+ + E  ++ E  R Y  N + I  + 
Sbjct: 192 FLETEASGPSLVSTPGQDGLGTLRQGYLEDSSVDPVREVTELIEAQRGYELNAKVISAAD 251

Query: 123 DMMTTTLD 130
            M+  T  
Sbjct: 252 QMLGATAQ 259



 Score = 44.9 bits (104), Expect = 0.004,   Method: Composition-based stats.
 Identities = 16/87 (18%), Positives = 31/87 (35%), Gaps = 3/87 (3%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY---RRKTISFEEVMHGSGGV 61
          + +  IA +G+  Q  R++ IS N+AN  TTG       +     + ++    ++ S G 
Sbjct: 1  MRALKIAATGMTAQQLRVETISNNLANMSTTGYNTRRAEFSDLHYQQMARPGTVNASDGT 60

Query: 62 RVKKIGVDQSTFVEEFDPGHPVANASG 88
           +                 H    +  
Sbjct: 61 VLPTGVQLGLGVRPAAVSIHLAQGSLS 87


>gi|118444200|ref|YP_877983.1| flagellar basal-body rod protein FlgG [Clostridium novyi NT]
 gi|118134656|gb|ABK61700.1| flagellar basal-body rod protein FlgG [Clostridium novyi NT]
          Length = 485

 Score = 55.3 bits (131), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 13/86 (15%), Positives = 32/86 (37%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
               + +   +    V  +     T     +         G+++  NV++  +  DM  T
Sbjct: 400 KKEGKNLYSNTANSGVPTVRSGLGTPKNLDNGDGYGEMLQGMLEMSNVDLAEQFTDMIVT 459

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R + A+ + I    +++   ++L R
Sbjct: 460 TRAFQASGKMISTGDEILQDIINLKR 485



 Score = 36.0 bits (81), Expect = 2.0,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 20/42 (47%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S +   SG+ V   ++ +   NIAN  TTG       ++
Sbjct: 1  MLRSMYAGISGMKVNQTKLDVTGNNIANVSTTGFKSSRVRFK 42


>gi|157165263|ref|YP_001467845.1| flagellar hook protein FlgE [Campylobacter concisus 13826]
 gi|112801725|gb|EAT99069.1| flagellar hook protein FlgE [Campylobacter concisus 13826]
          Length = 814

 Score = 55.3 bits (131), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 23/105 (21%), Positives = 40/105 (38%)

Query: 29  IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASG 88
           I  A T G + G       + +  E +   GG    +        +     G     A+ 
Sbjct: 710 IIGAFTNGQSFGLAQVALASFTNNEGLQSEGGNVFSQTANSGEAVIGAAGTGDKGTIAAS 769

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NV++     D+    R + AN +TI  S +M+ T L L +
Sbjct: 770 KLEASNVDLSRALTDLIVIQRGFQANSKTITTSDEMLNTLLQLKQ 814



 Score = 37.9 bits (86), Expect = 0.53,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 23/72 (31%), Gaps = 4/72 (5%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR----RKTISFEEVMHGSG 59
          ++ S     SGL      M +   NIAN  T G       +     +            G
Sbjct: 1  MMRSLWSGVSGLQAHQIAMDVEGNNIANVNTYGFKYNRANFADILSQTPRVATAPQGQLG 60

Query: 60 GVRVKKIGVDQS 71
          G    +IG+  +
Sbjct: 61 GQNAMQIGLGTT 72


>gi|311992329|gb|ADQ26738.1| flagellar distal rod protein [Aeromonas hydrophila]
          Length = 261

 Score = 55.3 bits (131), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 12/82 (14%), Positives = 26/82 (31%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +   G     +     +                G+++  NVNV  E  ++ +  
Sbjct: 178 FVNASGLQPMGENMFVETQSSGAPVQGVAGTDGLGVIKQGMLETSNVNVTEELVNLIQAQ 237

Query: 109 RLYMANLQTIKQSHDMMTTTLD 130
           R+Y  N + +     MM+  + 
Sbjct: 238 RVYEMNSKVLSAVDGMMSFLIQ 259



 Score = 44.1 bits (102), Expect = 0.007,   Method: Composition-based stats.
 Identities = 19/106 (17%), Positives = 34/106 (32%), Gaps = 6/106 (5%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
            +  I+ +GL  Q   + + S N+ANA T G        + + I  + +         + 
Sbjct: 2   PALWISKTGLDAQQTNISVTSNNLANASTVG------YKKSRAIFEDLLYQNINQPGGRS 55

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
               +         G  V          NV     + D+  + R Y
Sbjct: 56  SADTERPSGLMLGAGAKVVATQKNHSQGNVQTTDNSLDLMISGRGY 101


>gi|288958675|ref|YP_003449016.1| flagellar basal-body rod protein [Azospirillum sp. B510]
 gi|288910983|dbj|BAI72472.1| flagellar basal-body rod protein [Azospirillum sp. B510]
          Length = 261

 Score = 55.3 bits (131), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 17/116 (14%), Positives = 32/116 (27%)

Query: 16  AVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVE 75
                 +    E +        T      +  T +    +  +G     +          
Sbjct: 145 NAVDISINSSGEVLVKLDGQTATQNVGQIQLATFANAAGLEATGDNLFMETAASGQPVTG 204

Query: 76  EFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
                       G ++  NVNV+ E   +    R Y  N + IK + +MM     +
Sbjct: 205 NPGAPGFGRVTQGALETSNVNVVQEITTLITAQRAYEMNSKVIKTTDEMMQQASQM 260



 Score = 37.9 bits (86), Expect = 0.52,   Method: Composition-based stats.
 Identities = 13/62 (20%), Positives = 24/62 (38%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          + S  I  +G+  Q   ++ IS NIAN+ TTG       ++         +  +      
Sbjct: 1  MRSLAIGATGMIAQQLNVETISNNIANSTTTGYKKQRAEFQDLLYQNFRRIGSTSSDAGT 60

Query: 65 KI 66
           +
Sbjct: 61 VV 62


>gi|28900124|ref|NP_799779.1| putative flagellar basal-body rod protein [Vibrio parahaemolyticus
           RIMD 2210633]
 gi|260365774|ref|ZP_05778270.1| flagellar basal-body rod protein FlgG [Vibrio parahaemolyticus
           K5030]
 gi|260880696|ref|ZP_05893051.1| flagellar basal-body rod protein FlgG [Vibrio parahaemolyticus
           AN-5034]
 gi|260897698|ref|ZP_05906194.1| flagellar basal-body rod protein FlgG [Vibrio parahaemolyticus
           Peru-466]
 gi|260899391|ref|ZP_05907786.1| flagellar basal-body rod protein FlgG [Vibrio parahaemolyticus
           AQ4037]
 gi|28808407|dbj|BAC61612.1| putative flagellar basal-body rod protein [Vibrio parahaemolyticus
           RIMD 2210633]
 gi|308086222|gb|EFO35917.1| flagellar basal-body rod protein FlgG [Vibrio parahaemolyticus
           Peru-466]
 gi|308092230|gb|EFO41925.1| flagellar basal-body rod protein FlgG [Vibrio parahaemolyticus
           AN-5034]
 gi|308109302|gb|EFO46842.1| flagellar basal-body rod protein FlgG [Vibrio parahaemolyticus
           AQ4037]
 gi|308115005|gb|EFO52545.1| flagellar basal-body rod protein FlgG [Vibrio parahaemolyticus
           K5030]
 gi|328470103|gb|EGF41014.1| flagellar basal body rod protein FlgG [Vibrio parahaemolyticus
           10329]
          Length = 261

 Score = 55.3 bits (131), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 26/78 (33%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                  +   GG   ++                  +   G ++  NV V+ E  DM  T
Sbjct: 177 KFINPAGLEAVGGNLFRETEASGPADELIAGADGAGSIKQGALEGSNVQVVEEMVDMITT 236

Query: 108 NRLYMANLQTIKQSHDMM 125
            R Y  N + +  + DM+
Sbjct: 237 QRAYEMNAKVVSAADDML 254



 Score = 40.6 bits (93), Expect = 0.078,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 28/68 (41%), Gaps = 4/68 (5%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          + ++  ++ +G+A Q  +M  IS N+AN  T G       +          +    G +V
Sbjct: 1  MHSALWVSKTGMAAQDTKMTAISNNLANVNTVGFKRDRVVF----EDLFYSIQRQPGAQV 56

Query: 64 KKIGVDQS 71
           ++    S
Sbjct: 57 DQVNELPS 64


>gi|322382385|ref|ZP_08056292.1| FlgG-like protein [Paenibacillus larvae subsp. larvae B-3650]
 gi|321153738|gb|EFX46113.1| FlgG-like protein [Paenibacillus larvae subsp. larvae B-3650]
          Length = 266

 Score = 55.3 bits (131), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 13/65 (20%), Positives = 27/65 (41%)

Query: 69  DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
           D      +          +G ++  NV++  E  +M    R + AN + I  S +++   
Sbjct: 202 DPGISTPKNAETGTGTLMTGSLEMSNVDLTSEFTEMIVAQRGFQANSRIITTSDEVLQEV 261

Query: 129 LDLLR 133
           ++L R
Sbjct: 262 VNLKR 266


>gi|34497161|ref|NP_901376.1| flagellar basal body rod protein FlgG [Chromobacterium violaceum
           ATCC 12472]
 gi|34103018|gb|AAQ59381.1| flagellar basal-body rod protein flgG [Chromobacterium violaceum
           ATCC 12472]
          Length = 262

 Score = 55.3 bits (131), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 18/39 (46%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
           ++  NV V+ E  DM    R Y  N + +  + +M+   
Sbjct: 219 LEGSNVQVVEEMVDMIAAQRTYEMNTKVLSAADNMLQQL 257



 Score = 40.2 bits (92), Expect = 0.085,   Method: Composition-based stats.
 Identities = 12/38 (31%), Positives = 20/38 (52%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGS 41
          +  +  I+ +G+  Q AR+  I+ N+AN  TTG     
Sbjct: 1  MNPALWISKTGIQAQDARLTAIANNLANVNTTGFKRDR 38


>gi|51894131|ref|YP_076822.1| flagellar hook protein [Symbiobacterium thermophilum IAM 14863]
 gi|51857820|dbj|BAD41978.1| flagellar hook protein [Symbiobacterium thermophilum IAM 14863]
          Length = 418

 Score = 55.3 bits (131), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 25/47 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NV++  +  +M  T R Y A+ + +  + DM+   ++L R
Sbjct: 372 PGNLEGSNVDLAGQFTEMILTQRGYQASARVVSTADDMLQEIINLKR 418



 Score = 37.2 bits (84), Expect = 0.75,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 18/40 (45%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          + S +   SG+     RM +I  NIAN  TTG       +
Sbjct: 1  MRSLYSGVSGIRSHQTRMDVIGNNIANVNTTGFKASRVTF 40


>gi|2494522|sp|P70911|FLGC_BORHE RecName: Full=Flagellar basal-body rod protein flgC
 gi|1621621|gb|AAB51474.1| flagellar rod protein FLgC [Borrelia hermsii]
          Length = 59

 Score = 55.3 bits (131), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 18/56 (32%), Positives = 29/56 (51%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG 57
            L +S + A++GL  Q  R+ +I+ NIAN  TT  + G    R++ I    V+  
Sbjct: 1  MGLFSSINTASTGLTAQRLRLDVIANNIANVETTRTSEGGSYRRQRVIFAPRVVSP 56


>gi|328545505|ref|YP_004305614.1| flagellar basal-body rod protein FlgG [polymorphum gilvum
           SL003B-26A1]
 gi|326415246|gb|ADZ72309.1| Flagellar basal-body rod protein FlgG [Polymorphum gilvum
           SL003B-26A1]
          Length = 262

 Score = 55.3 bits (131), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 19/42 (45%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
             G  +  NV+ + E  ++    R Y  N + I+ + DM  T
Sbjct: 215 RQGYQEASNVDPVKEITELISAQRGYEMNSKVIQAADDMAGT 256



 Score = 44.9 bits (104), Expect = 0.004,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 21/40 (52%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          + +  IA +G++ Q   +++I+ NIAN  TT        +
Sbjct: 1  MKALAIAATGMSAQQLNVEVIANNIANMNTTAYKRARAEF 40


>gi|256059804|ref|ZP_05449999.1| flagellar hook protein FlgE [Brucella neotomae 5K33]
 gi|261323784|ref|ZP_05962981.1| flagellar hook protein flgE [Brucella neotomae 5K33]
 gi|261299764|gb|EEY03261.1| flagellar hook protein flgE [Brucella neotomae 5K33]
          Length = 396

 Score = 55.3 bits (131), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 37/111 (33%), Gaps = 2/111 (1%)

Query: 25  ISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVA 84
           +  + A      +      YR    +       +       +   +S  V    P     
Sbjct: 286 VGNDGAVVAVYENGTQKVLYRIPLANVASPDRMTVVSGNIFLPSAESGDVRLGFPQGDGM 345

Query: 85  N--ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
               SG ++  N ++  E  DM E  R Y AN +  +   ++M   ++L R
Sbjct: 346 GKIMSGTLEESNADIAQELTDMIEAQRSYTANSKVFQTGSELMDVLVNLKR 396



 Score = 44.9 bits (104), Expect = 0.004,   Method: Composition-based stats.
 Identities = 18/90 (20%), Positives = 30/90 (33%), Gaps = 2/90 (2%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG- 60
            L        SG+  Q+ R+  +++NIANA T G       +    +      + SG  
Sbjct: 1  MSLYGMMRTGVSGMNAQANRLSTVADNIANASTVGYKRAETQFSSLVLPSTAGQYNSGSV 60

Query: 61 -VRVKKIGVDQSTFVEEFDPGHPVANASGI 89
             V+    DQ              + +G 
Sbjct: 61 LTDVRYGISDQGGIRSTSSTTDLAIDGNGY 90


>gi|262396033|ref|YP_003287886.1| flagellar basal-body rod protein FlgG [Vibrio sp. Ex25]
 gi|262339627|gb|ACY53421.1| flagellar basal-body rod protein FlgG [Vibrio sp. Ex25]
          Length = 243

 Score = 55.3 bits (131), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 25/78 (32%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                  +   GG   ++                      G ++  NV V+ E  DM  T
Sbjct: 159 KFINPAGLEAVGGNLFRETEASGPADELIAGEDGAGLIKQGALEGSNVQVVEEMVDMITT 218

Query: 108 NRLYMANLQTIKQSHDMM 125
            R Y  N + +  + DM+
Sbjct: 219 QRAYEMNAKVVSAADDML 236


>gi|224437581|ref|ZP_03658537.1| flagellar hook protein FlgE [Helicobacter cinaedi CCUG 18818]
          Length = 718

 Score = 55.3 bits (131), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 13/85 (15%), Positives = 31/85 (36%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +    +   GG    + G      +   + G     +   ++  NV++      +    
Sbjct: 634 FANNTGLQAEGGNVFSQTGNSGEPMIGAANTGRRGGVSGSKLEMSNVDLSRSLTQLIVVQ 693

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R + AN + +  S  ++ T L+L +
Sbjct: 694 RGFQANSKAVTTSDQILNTLLNLKQ 718



 Score = 37.5 bits (85), Expect = 0.60,   Method: Composition-based stats.
 Identities = 10/33 (30%), Positives = 15/33 (45%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ S     SG+      + + S NIAN  T G
Sbjct: 1  MLRSLWSGVSGMQAHQIALDVESNNIANVNTVG 33


>gi|88811801|ref|ZP_01127055.1| flagellar hook protein [Nitrococcus mobilis Nb-231]
 gi|88791192|gb|EAR22305.1| flagellar hook protein [Nitrococcus mobilis Nb-231]
          Length = 400

 Score = 55.3 bits (131), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 12/84 (14%), Positives = 25/84 (29%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                + +   G     +     +                G ++  NVN+  +   M   
Sbjct: 316 RFPSPQSLQQIGDTHWAETFASGAPVTAAPGSSGVGTIQGGALEKSNVNLTEQLVHMITA 375

Query: 108 NRLYMANLQTIKQSHDMMTTTLDL 131
            R + AN Q I     +  + L++
Sbjct: 376 QRNFQANSQMISTQDQITQSILNI 399


>gi|254699262|ref|ZP_05161090.1| flagellar hook protein FlgE [Brucella suis bv. 5 str. 513]
 gi|254706497|ref|ZP_05168325.1| flagellar hook protein FlgE [Brucella pinnipedialis M163/99/10]
 gi|254711218|ref|ZP_05173029.1| flagellar hook protein FlgE [Brucella pinnipedialis B2/94]
 gi|254711818|ref|ZP_05173629.1| flagellar hook protein FlgE [Brucella ceti M644/93/1]
 gi|254714887|ref|ZP_05176698.1| flagellar hook protein FlgE [Brucella ceti M13/05/1]
 gi|256015898|ref|YP_003105907.1| flagellar hook protein [Brucella microti CCM 4915]
 gi|256030153|ref|ZP_05443767.1| flagellar hook protein FlgE [Brucella pinnipedialis M292/94/1]
 gi|256158332|ref|ZP_05456236.1| flagellar hook protein FlgE [Brucella ceti M490/95/1]
 gi|256252734|ref|ZP_05458270.1| flagellar hook protein FlgE [Brucella ceti B1/94]
 gi|260166795|ref|ZP_05753606.1| flagellar hook protein FlgE [Brucella sp. F5/99]
 gi|261216577|ref|ZP_05930858.1| flagellar hook protein flgE [Brucella ceti M13/05/1]
 gi|261219813|ref|ZP_05934094.1| flagellar hook protein flgE [Brucella ceti B1/94]
 gi|261313950|ref|ZP_05953147.1| flagellar hook protein flgE [Brucella pinnipedialis M163/99/10]
 gi|261318810|ref|ZP_05958007.1| flagellar hook protein flgE [Brucella pinnipedialis B2/94]
 gi|261319447|ref|ZP_05958644.1| flagellar hook protein flgE [Brucella ceti M644/93/1]
 gi|261749702|ref|ZP_05993411.1| flagellar hook protein flgE [Brucella suis bv. 5 str. 513]
 gi|261756173|ref|ZP_05999882.1| trypsin inhibitor Kunitz [Brucella sp. F5/99]
 gi|265987183|ref|ZP_06099740.1| flagellar hook protein flgE [Brucella pinnipedialis M292/94/1]
 gi|265996846|ref|ZP_06109403.1| flagellar hook protein flgE [Brucella ceti M490/95/1]
 gi|255998558|gb|ACU50245.1| flagellar hook protein [Brucella microti CCM 4915]
 gi|260918397|gb|EEX85050.1| flagellar hook protein flgE [Brucella ceti B1/94]
 gi|260921666|gb|EEX88234.1| flagellar hook protein flgE [Brucella ceti M13/05/1]
 gi|261292137|gb|EEX95633.1| flagellar hook protein flgE [Brucella ceti M644/93/1]
 gi|261298033|gb|EEY01530.1| flagellar hook protein flgE [Brucella pinnipedialis B2/94]
 gi|261302976|gb|EEY06473.1| flagellar hook protein flgE [Brucella pinnipedialis M163/99/10]
 gi|261736157|gb|EEY24153.1| trypsin inhibitor Kunitz [Brucella sp. F5/99]
 gi|261739455|gb|EEY27381.1| flagellar hook protein flgE [Brucella suis bv. 5 str. 513]
 gi|262551143|gb|EEZ07304.1| flagellar hook protein flgE [Brucella ceti M490/95/1]
 gi|264659380|gb|EEZ29641.1| flagellar hook protein flgE [Brucella pinnipedialis M292/94/1]
          Length = 396

 Score = 55.3 bits (131), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 37/111 (33%), Gaps = 2/111 (1%)

Query: 25  ISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVA 84
           +  + A      +      YR    +       +       +   +S  V    P     
Sbjct: 286 VGNDGAVVAVYENGTQKVLYRIPLANVASPDRMTVVSGNIFLPSAESGDVRLGFPQGDGM 345

Query: 85  N--ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
               SG ++  N ++  E  DM E  R Y AN +  +   ++M   ++L R
Sbjct: 346 GKIMSGTLEESNADIAQELTDMIEAQRSYTANSKVFQTGSELMDVLVNLKR 396



 Score = 44.9 bits (104), Expect = 0.004,   Method: Composition-based stats.
 Identities = 18/90 (20%), Positives = 30/90 (33%), Gaps = 2/90 (2%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG- 60
            L        SG+  Q+ R+  +++NIANA T G       +    +      + SG  
Sbjct: 1  MSLYGMMRTGVSGMNAQANRLSTVADNIANASTVGYKRAETQFSSLVLPSTAGQYNSGSV 60

Query: 61 -VRVKKIGVDQSTFVEEFDPGHPVANASGI 89
             V+    DQ              + +G 
Sbjct: 61 LTDVRYGISDQGGIRSTSSTTDLAIDGNGY 90


>gi|261344140|ref|ZP_05971784.1| flagellar basal-body rod protein FlgG [Providencia rustigianii DSM
           4541]
 gi|282567732|gb|EFB73267.1| flagellar basal-body rod protein FlgG [Providencia rustigianii DSM
           4541]
          Length = 260

 Score = 55.3 bits (131), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 28/85 (32%)

Query: 47  KTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
            T   +  +   G     +     +                G+++  NVNV  E  +M +
Sbjct: 176 TTFINDAGLESMGENLYMETASSGAPKESAPGTNGAGLLYQGMLETSNVNVAEELVNMIQ 235

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDL 131
           T R Y  N + +  S  M+     L
Sbjct: 236 TQRAYEINSKAVSASDQMLQRLTQL 260



 Score = 41.4 bits (95), Expect = 0.044,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 20/41 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I S  IA +GL  Q   + +IS N+AN  T G       +
Sbjct: 1  MIRSLWIAKTGLDAQQTNLDVISNNLANVSTNGFKRQRAVF 41


>gi|91776309|ref|YP_546065.1| flagellar hook protein FlgE [Methylobacillus flagellatus KT]
 gi|91710296|gb|ABE50224.1| protein of unknown function DUF1078-like protein [Methylobacillus
           flagellatus KT]
          Length = 410

 Score = 55.3 bits (131), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 19/77 (24%), Positives = 32/77 (41%)

Query: 55  MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
           +   G  +  +        V   + G      S  ++  NV++  E  +M    R+Y AN
Sbjct: 333 LQPLGDNQWAETSESGPPIVGVANSGGLGVLQSYRLEDSNVDLTAELVNMITAQRVYQAN 392

Query: 115 LQTIKQSHDMMTTTLDL 131
            QTIK    +M T ++L
Sbjct: 393 AQTIKTEDQIMQTLVNL 409


>gi|315125986|ref|YP_004067989.1| flagellar basal-body rod FlgG [Pseudoalteromonas sp. SM9913]
 gi|315014500|gb|ADT67838.1| flagellar basal-body rod FlgG [Pseudoalteromonas sp. SM9913]
          Length = 261

 Score = 55.3 bits (131), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 11/77 (14%), Positives = 24/77 (31%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +    +   GG   ++                        ++  NV+V+ E   M    
Sbjct: 178 FANPAGLQSLGGNLYRETAASGEPVEGIPGEDAFGGLQQFTIEGSNVSVVDEMVSMIAVQ 237

Query: 109 RLYMANLQTIKQSHDMM 125
           R Y  N + +  + +M+
Sbjct: 238 RAYEMNAKVVSAADEML 254



 Score = 42.6 bits (98), Expect = 0.019,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 21/41 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          + ++  ++ +GLA Q  RM  IS N+AN  T G       +
Sbjct: 1  MNSALWVSKTGLAAQDLRMTTISNNLANVSTAGFKKDRAVF 41


>gi|307945666|ref|ZP_07661002.1| flagellar basal-body rod protein FlgG [Roseibium sp. TrichSKD4]
 gi|307771539|gb|EFO30764.1| flagellar basal-body rod protein FlgG [Roseibium sp. TrichSKD4]
          Length = 260

 Score = 55.3 bits (131), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 18/103 (17%), Positives = 35/103 (33%)

Query: 29  IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASG 88
           ++     G T      +      +  +   G     +        V+             
Sbjct: 157 VSAVDAGGATVNLGQIQLARFVNKAGLEAIGDNLFYETEASGPAQVDNPGGNGFGNVQQY 216

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            ++  NV+ + E AD+    R Y  N + IK + +M +TT +L
Sbjct: 217 FLEMANVDAVTEIADLISAQRAYEMNSRVIKAADEMYSTTSNL 259



 Score = 38.3 bits (87), Expect = 0.39,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 24/41 (58%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          + + HIA +G+  Q   +++IS N+AN RTTG       ++
Sbjct: 1  MKALHIAATGMKAQERNVEVISNNVANLRTTGYKRQRVDFQ 41


>gi|91792666|ref|YP_562317.1| flagellar basal body rod protein FlgG [Shewanella denitrificans
           OS217]
 gi|91714668|gb|ABE54594.1| Flagellar basal-body rod FlgG [Shewanella denitrificans OS217]
          Length = 262

 Score = 55.3 bits (131), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 14/80 (17%), Positives = 26/80 (32%)

Query: 46  RKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
                    +   G     + G   +            A   G ++  NVNV  E  ++ 
Sbjct: 176 MTDFINPSGLDPLGQNLYTETGASGTPIQGTASLDGLGAIRQGALETSNVNVTEELVNLI 235

Query: 106 ETNRLYMANLQTIKQSHDMM 125
           ++ R+Y  N + I     M+
Sbjct: 236 QSQRIYEMNSKVISAVDQML 255



 Score = 40.6 bits (93), Expect = 0.071,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  +  I+ +GL  Q   + +IS N+ANA T G       +
Sbjct: 1  MHPALWISKTGLDAQQTDISVISNNVANASTIGYKKSRAVF 41


>gi|117928057|ref|YP_872608.1| hypothetical protein Acel_0849 [Acidothermus cellulolyticus 11B]
 gi|117648520|gb|ABK52622.1| protein of unknown function DUF1078 domain protein [Acidothermus
           cellulolyticus 11B]
          Length = 398

 Score = 55.3 bits (131), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 13/79 (16%), Positives = 31/79 (39%)

Query: 55  MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
           +   G     +     +  +     G     A+G ++  NV++  E  ++    R + AN
Sbjct: 320 LTKVGTSEYAESVNSGAAQIGASGTGSRGQLAAGELEGSNVDLSQEFTNLIIAERGFQAN 379

Query: 115 LQTIKQSHDMMTTTLDLLR 133
            + I  S  ++   ++L +
Sbjct: 380 AKVITTSDQVLQDLVNLKQ 398



 Score = 37.5 bits (85), Expect = 0.58,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 19/59 (32%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
          ++ S     SGL      + ++  NIAN  T G       +               GV+
Sbjct: 1  MLRSLFSGVSGLRAHQTMLDVVGNNIANVNTVGFKASQVEFEDTLSQMLRAAGAPQGVQ 59


>gi|313144034|ref|ZP_07806227.1| flagellar hook protein FlgE [Helicobacter cinaedi CCUG 18818]
 gi|313129065|gb|EFR46682.1| flagellar hook protein FlgE [Helicobacter cinaedi CCUG 18818]
          Length = 707

 Score = 55.3 bits (131), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 13/85 (15%), Positives = 31/85 (36%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +    +   GG    + G      +   + G     +   ++  NV++      +    
Sbjct: 623 FANNTGLQAEGGNVFSQTGNSGEPMIGAANTGRRGGVSGSKLEMSNVDLSRSLTQLIVVQ 682

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R + AN + +  S  ++ T L+L +
Sbjct: 683 RGFQANSKAVTTSDQILNTLLNLKQ 707


>gi|224373490|ref|YP_002607862.1| flagellar hook-associated protein FlgK [Nautilia profundicola AmH]
 gi|223589300|gb|ACM93036.1| flagellar hook-associated protein FlgK [Nautilia profundicola AmH]
          Length = 727

 Score = 55.3 bits (131), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 16/108 (14%), Positives = 34/108 (31%), Gaps = 1/108 (0%)

Query: 27  ENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQ-STFVEEFDPGHPVAN 85
             IAN+         + Y         +     G+        Q  +  +E       + 
Sbjct: 620 NTIANSVLQLQYDNINFYVNGKTQSNTIYGFYRGLTADLANQTQIVSSKKESTQTLLTSI 679

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++       VN+  E  ++ +  R Y AN + I   + M+     + +
Sbjct: 680 SNEYYSLSGVNIDEELVNLEQYQRGYQANAKVITTINQMLDALFSIKQ 727



 Score = 39.1 bits (89), Expect = 0.19,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 22/72 (30%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            +  S   A +GL      + + S NI+NA           +               GV
Sbjct: 1  MAISTSFSTALTGLKAHQTAIDVTSNNISNASNPDYVRERAVFSTLNPINSIPGDIGTGV 60

Query: 62 RVKKIGVDQSTF 73
          ++  I     TF
Sbjct: 61 QISSIYRITDTF 72


>gi|254473478|ref|ZP_05086875.1| flagellar hook protein FlgE [Pseudovibrio sp. JE062]
 gi|211957594|gb|EEA92797.1| flagellar hook protein FlgE [Pseudovibrio sp. JE062]
          Length = 397

 Score = 55.3 bits (131), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 16/83 (19%), Positives = 29/83 (34%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            S  + +    G             V         +  SG V+  NV++  E  +M +  
Sbjct: 314 FSNPDGLQAKSGNVYAATDASGDPAVGFPGDNGFGSLYSGAVEGSNVDLAAELTEMVQAQ 373

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y AN +    S +++    +L
Sbjct: 374 RTYSANTKVFNASSELLQELNNL 396



 Score = 46.4 bits (108), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 27/65 (41%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            L    + + SG+  QS ++  +++NI+NA T G       +     S     H SG V
Sbjct: 1  MGLYGIMNTSVSGMNAQSNKLSTVADNISNANTVGYKRYKTAFSSLVGSGGTSGHESGIV 60

Query: 62 RVKKI 66
              +
Sbjct: 61 NTTVV 65


>gi|162147478|ref|YP_001601939.1| flagellar basal body rod protein FlgG [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|209545587|ref|YP_002277816.1| flagellar basal body rod protein FlgG [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|161786055|emb|CAP55637.1| putative flagellar basal-body rod protein flgG [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|209533264|gb|ACI53201.1| flagellar basal-body rod protein FlgG [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 262

 Score = 55.3 bits (131), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 23/47 (48%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
             G ++  +VNV+ E  D+    R Y  N + I  S +M+ T  +L 
Sbjct: 216 QQGFIEESSVNVVTEITDLITAQRAYEMNSKVITASDEMLQTLTNLK 262



 Score = 43.3 bits (100), Expect = 0.012,   Method: Composition-based stats.
 Identities = 14/42 (33%), Positives = 22/42 (52%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S  IA +G+  Q+  +  IS NIAN  TTG       ++
Sbjct: 1  MMPSLDIAATGMQAQTTNVDTISNNIANMTTTGYKRRRAEFQ 42


>gi|229826311|ref|ZP_04452380.1| hypothetical protein GCWU000182_01683 [Abiotrophia defectiva ATCC
           49176]
 gi|229789181|gb|EEP25295.1| hypothetical protein GCWU000182_01683 [Abiotrophia defectiva ATCC
           49176]
          Length = 495

 Score = 55.3 bits (131), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 28/48 (58%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++G+++  NV++  +  DM  T R + AN +TI  +  ++   ++L R
Sbjct: 448 STGMLEMSNVDLAAQFTDMITTQRGFQANSRTITTTDSILEELINLKR 495



 Score = 36.8 bits (83), Expect = 1.1,   Method: Composition-based stats.
 Identities = 21/70 (30%), Positives = 28/70 (40%), Gaps = 6/70 (8%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSD------PYRRKTISFEEVMHG 57
          ++ S     +GL V   +M +I  NIAN  T G    S           +T S       
Sbjct: 1  MMRSLFSGVAGLKVHQTKMDVIGNNIANVNTVGFKSSSTVFSDVFYQTTQTASGPNKESN 60

Query: 58 SGGVRVKKIG 67
           GGV  K+IG
Sbjct: 61 VGGVNPKQIG 70


>gi|296283217|ref|ZP_06861215.1| flagellar hook protein FlgE [Citromicrobium bathyomarinum JL354]
          Length = 412

 Score = 54.9 bits (130), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 22/128 (17%), Positives = 44/128 (34%), Gaps = 4/128 (3%)

Query: 10  IANS---GLAVQSARMQIISENIANARTTGDTPGSDPY-RRKTISFEEVMHGSGGVRVKK 65
           IA+S   G+      +++  + I +A     T          T +  + +    G     
Sbjct: 285 IASSTDGGMLNNLVSVEVSKDGIVSAVFDDGTSRPVFQLPMATFANPDGLSRLPGNAYTV 344

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
                +  +           ++G ++  NV++  E  +M    R Y A+ + I    DM+
Sbjct: 345 SQQSGNVAIGRPGELGSGTISAGTLEASNVDLAQEFTNMIRFQRAYSASSKIITTVDDML 404

Query: 126 TTTLDLLR 133
                L R
Sbjct: 405 QEVSALKR 412


>gi|90021855|ref|YP_527682.1| ribonuclease III [Saccharophagus degradans 2-40]
 gi|89951455|gb|ABD81470.1| flagellar basal body FlaE [Saccharophagus degradans 2-40]
          Length = 804

 Score = 54.9 bits (130), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 21/129 (16%), Positives = 49/129 (37%), Gaps = 2/129 (1%)

Query: 5   IASAHIANSGLAVQSARMQIISEN--IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            +   I+ +G +        I++N  I    T G +           S ++ +  +G   
Sbjct: 675 FSVNDISQNGFSTGRLSGLNIADNGTIFARFTNGQSLRLGQVVLADFSNQQGLQPTGNTM 734

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
             +     S  V         A  +G ++  NV++  +  ++    R + A+ +TI+ + 
Sbjct: 735 WAETFESGSPNVGTPGSAALGAVQAGALEESNVDLSEQLVNLIIAQRNFQASAKTIETAD 794

Query: 123 DMMTTTLDL 131
            +  T ++L
Sbjct: 795 AVTQTIINL 803


>gi|319781665|ref|YP_004141141.1| flagellar hook-basal body protein [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317167553|gb|ADV11091.1| flagellar hook-basal body protein [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 419

 Score = 54.9 bits (130), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 22/44 (50%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  NV++  E  +M    R Y AN +  +   D+M   ++L R
Sbjct: 376 LENSNVDIAEELTNMIAAQRSYTANSKVFQTGSDLMDVLVNLKR 419



 Score = 45.6 bits (106), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 30/77 (38%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            L        SG+  Q+ R+  +++NIAN+ TTG    S  +    +      + SGGV
Sbjct: 1  MSLYGMMRTGVSGMNAQANRLSTVADNIANSDTTGYKRSSAEFSTLVMPSTGGAYNSGGV 60

Query: 62 RVKKIGVDQSTFVEEFD 78
                      V ++ 
Sbjct: 61 TTTIRQAVSDPGVLQYT 77


>gi|168180921|ref|ZP_02615585.1| flagellar hook protein FlgE [Clostridium botulinum NCTC 2916]
 gi|182668204|gb|EDT80183.1| flagellar hook protein FlgE [Clostridium botulinum NCTC 2916]
 gi|322806984|emb|CBZ04554.1| flagellar hook protein FlgE [Clostridium botulinum H04402 065]
          Length = 334

 Score = 54.9 bits (130), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 22/129 (17%), Positives = 45/129 (34%), Gaps = 5/129 (3%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           + S  I   GL V S      +     A  +    G           + +   S      
Sbjct: 211 VQSFTIDKDGLIVASLVDGTSAALGQIAMASFKNEGG-----LEKMGKNLYRNSANSGEA 265

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
            I   + T  ++ +        +G+++  NV++  E  +M   NR + A  + I    ++
Sbjct: 266 IIRSGRGTDADKDNSKGYGDMLNGMIEMSNVDLAEEFTEMIVANRAFQACGKMITTGDEI 325

Query: 125 MTTTLDLLR 133
           +   ++L R
Sbjct: 326 LQELVNLKR 334



 Score = 41.4 bits (95), Expect = 0.042,   Method: Composition-based stats.
 Identities = 15/42 (35%), Positives = 22/42 (52%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S +   SGL  Q  R+ I+  NIANA TT     S  ++
Sbjct: 1  MLRSMYSGISGLKAQQTRLDIVGNNIANANTTAFKSQSIRFQ 42


>gi|119953550|ref|YP_945760.1| flagellar basal-body rod protein FlgF [Borrelia turicatae 91E135]
 gi|119862321|gb|AAX18089.1| flagellar basal-body rod protein FlgF [Borrelia turicatae 91E135]
          Length = 286

 Score = 54.9 bits (130), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 23/45 (51%), Gaps = 1/45 (2%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD-LLR 133
           ++  NVN + E   M   NR Y AN +TI+    ++   ++ + +
Sbjct: 241 LEGSNVNAINEMVSMITVNRAYEANQKTIQTEDSLLGKLINEIGK 285



 Score = 45.6 bits (106), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 30/72 (41%)

Query: 3  YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
          Y++   + A SG+  Q  R+ +I+ N+AN   TG        +         ++  G  +
Sbjct: 4  YVVRGIYTAASGMMAQRHRLDVIANNLANIDLTGYKKDLSVQKAFPEMLIRRINDDGLYK 63

Query: 63 VKKIGVDQSTFV 74
            K  ++ +  +
Sbjct: 64 FPKGYLETAPVI 75


>gi|86356330|ref|YP_468222.1| flagellar hook protein FlgE [Rhizobium etli CFN 42]
 gi|86280432|gb|ABC89495.1| flagellar hook protein [Rhizobium etli CFN 42]
          Length = 434

 Score = 54.9 bits (130), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 30/82 (36%)

Query: 52  EEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
            + +    G      G    T              SG ++  NV++  E  +M E  R Y
Sbjct: 353 PDKLTLMSGNVYSANGQSGVTVTGFPQTNGLGTIKSGALEGSNVDLAGELTEMIEAQRSY 412

Query: 112 MANLQTIKQSHDMMTTTLDLLR 133
            AN +  +   D+M   ++L R
Sbjct: 413 TANSKVFQTGSDIMDVLVNLKR 434



 Score = 49.1 bits (115), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/101 (24%), Positives = 41/101 (40%), Gaps = 4/101 (3%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             +  S   A SG+  Q+ R+  +S+NIAN  TTG    S  +    +      + SGGV
Sbjct: 1   MSIFGSMKTAVSGMNAQANRLSTVSDNIANVNTTGYKAVSTSFSSLVLPSSGGNYNSGGV 60

Query: 62  R--VKKIGVDQSTFVEEFDPGHPVANASGI--VKYPNVNVL 98
           +  V++   DQ              +  G   V+ P+   +
Sbjct: 61  QTSVRQAVSDQGDISYTTSTTDLAISGDGFFIVQGPDGTPV 101


>gi|56460250|ref|YP_155531.1| flagellar basal body rod protein FlgG [Idiomarina loihiensis L2TR]
 gi|56179260|gb|AAV81982.1| Flagella basal body rod protein [Idiomarina loihiensis L2TR]
          Length = 262

 Score = 54.9 bits (130), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 21/126 (16%), Positives = 39/126 (30%), Gaps = 9/126 (7%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKT---ISFEEVMHGSGG 60
           +  +  I    ++V       IS+      T    P +    +           +   G 
Sbjct: 137 IEPAIQIPEDAMSV------SISQEGEVTVTQPGNPDNVVVGQINLVNFINPAGLQPMGQ 190

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
              K+  V  +                G ++  NVNV  E  ++ E+ R Y  N + I  
Sbjct: 191 NLYKETAVSGAPLEAVPGVDGMGNTIQGALETSNVNVTEELVNLIESQRGYEMNSKVISS 250

Query: 121 SHDMMT 126
              M++
Sbjct: 251 VDQMLS 256



 Score = 37.9 bits (86), Expect = 0.46,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 20/41 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  +  I+ +GL  Q   + +IS N+AN+ T G       +
Sbjct: 1  MNPALWISKTGLDAQQRDISVISNNLANSSTIGFKKSRAVF 41


>gi|295688784|ref|YP_003592477.1| flagellar basal-body rod protein FlgG [Caulobacter segnis ATCC
           21756]
 gi|295430687|gb|ADG09859.1| flagellar basal-body rod protein FlgG [Caulobacter segnis ATCC
           21756]
          Length = 262

 Score = 54.9 bits (130), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 18/46 (39%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
                +  NV+ + E   +    R Y  N + I  +  M+ TT  +
Sbjct: 215 MQHYTEASNVDSVSEITALITAQRAYEMNSKVISTADQMLQTTSQM 260



 Score = 41.4 bits (95), Expect = 0.038,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 21/41 (51%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          + +   A SG++ Q   +++IS NIAN  T G       ++
Sbjct: 1  MQALRTAASGMSAQQLNVEVISNNIANMNTVGFKRQRAEFQ 41


>gi|291519588|emb|CBK74809.1| fagellar hook-basal body proteins [Butyrivibrio fibrisolvens 16/4]
          Length = 582

 Score = 54.9 bits (130), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 26/53 (49%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
              A  +G ++  NV++  E  DM  T R + AN + I  S  M+   ++L R
Sbjct: 530 DGSAMNTGQLEMANVDLSSEFTDMITTQRGFQANSRIITVSDTMLEELINLKR 582


>gi|157961173|ref|YP_001501207.1| flagellar basal body rod protein FlgG [Shewanella pealeana ATCC
           700345]
 gi|157846173|gb|ABV86672.1| flagellar basal-body rod protein FlgG [Shewanella pealeana ATCC
           700345]
          Length = 262

 Score = 54.9 bits (130), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 27/78 (34%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +   G     + G   +            A   G ++  NVNV  E  ++ E+ 
Sbjct: 179 FINPSGLDPMGQNLYMETGASGTPIQGTASLDGMGAIRQGALETSNVNVTEELVNLIESQ 238

Query: 109 RLYMANLQTIKQSHDMMT 126
           R+Y  N + I     M++
Sbjct: 239 RIYEMNSKVISAVDQMLS 256



 Score = 39.9 bits (91), Expect = 0.13,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  +  I+ +GL  Q   + +IS N+ANA T G       +
Sbjct: 1  MHPALWISKTGLDAQQTDISVISNNVANASTVGFKKSRAVF 41


>gi|291613038|ref|YP_003523195.1| fagellar hook-basal body protein [Sideroxydans lithotrophicus ES-1]
 gi|291583150|gb|ADE10808.1| fagellar hook-basal body protein [Sideroxydans lithotrophicus ES-1]
          Length = 405

 Score = 54.9 bits (130), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 18/83 (21%), Positives = 33/83 (39%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            S  + +   G  +  +     +  V            +  V+  NV++  E  +M    
Sbjct: 322 FSNAQGLQPLGNNQWVETSTSGTPLVGAPGSASLGVLQTSAVEDSNVDLTAELVNMITAQ 381

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R+Y AN QTIK    ++ T ++L
Sbjct: 382 RVYQANAQTIKTQDQVLQTIVNL 404


>gi|86146153|ref|ZP_01064479.1| polar flagellar FlgG [Vibrio sp. MED222]
 gi|218708806|ref|YP_002416427.1| flagellar basal body rod protein FlgG [Vibrio splendidus LGP32]
 gi|85836100|gb|EAQ54232.1| polar flagellar FlgG [Vibrio sp. MED222]
 gi|218321825|emb|CAV17796.1| Flagellar basal-body rod protein flgG [Vibrio splendidus LGP32]
          Length = 262

 Score = 54.9 bits (130), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 23/78 (29%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +   G       G                     +++  NVNV  E  +M E  
Sbjct: 179 FVNPGGLEPIGQNLYLPTGASGDPQEGVPGLNGLGNVRQSMLEASNVNVTEELVNMIEAQ 238

Query: 109 RLYMANLQTIKQSHDMMT 126
           R+Y  N + I     MM+
Sbjct: 239 RVYEMNSKVISAVDKMMS 256



 Score = 40.2 bits (92), Expect = 0.097,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 19/41 (46%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  +  ++ +GL  Q   +  IS N+ANA T G       +
Sbjct: 1  MHPALWVSKTGLDAQQTNISTISNNLANASTIGFKKSRAVF 41


>gi|161621182|ref|YP_001595068.1| flagellar hook protein FlgE [Brucella canis ATCC 23365]
 gi|254702383|ref|ZP_05164211.1| flagellar hook protein FlgE [Brucella suis bv. 3 str. 686]
 gi|260568714|ref|ZP_05839183.1| flagellar hook protein FlgE [Brucella suis bv. 4 str. 40]
 gi|261752946|ref|ZP_05996655.1| flagellar hook protein FlgE [Brucella suis bv. 3 str. 686]
 gi|161337993|gb|ABX64297.1| flagellar basal body FlaE domain protein [Brucella canis ATCC
           23365]
 gi|260155379|gb|EEW90460.1| flagellar hook protein FlgE [Brucella suis bv. 4 str. 40]
 gi|261742699|gb|EEY30625.1| flagellar hook protein FlgE [Brucella suis bv. 3 str. 686]
          Length = 396

 Score = 54.9 bits (130), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 37/111 (33%), Gaps = 2/111 (1%)

Query: 25  ISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVA 84
           +  + A      +      YR    +       +       +   +S  V    P     
Sbjct: 286 VGNDGAVVAVYENGTQKVLYRIPLANVASPNRMTVVSGNIFLPSAESGDVRLGFPQGDGM 345

Query: 85  N--ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
               SG ++  N ++  E  DM E  R Y AN +  +   ++M   ++L R
Sbjct: 346 GKIMSGTLEESNADIAQELTDMIEAQRSYTANSKVFQTGSELMDVLVNLKR 396



 Score = 44.5 bits (103), Expect = 0.005,   Method: Composition-based stats.
 Identities = 18/90 (20%), Positives = 29/90 (32%), Gaps = 2/90 (2%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG- 60
            L        SG+  Q+ R+  +++NIANA T G       +    +      + SG  
Sbjct: 1  MSLYGMMRTGVSGMNAQANRLSTVADNIANASTVGYKRAETQFSSLVLPSTAGQYNSGSV 60

Query: 61 -VRVKKIGVDQSTFVEEFDPGHPVANASGI 89
             V     DQ              + +G 
Sbjct: 61 LTDVHYGISDQGGIRSTSSTTDLAIDGNGY 90


>gi|319403961|emb|CBI77549.1| Flagellar basal-body rod protein flgG [Bartonella rochalimae ATCC
           BAA-1498]
 gi|319406976|emb|CBI80613.1| Flagellar basal-body rod protein flgG [Bartonella sp. 1-1C]
          Length = 264

 Score = 54.9 bits (130), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 13/93 (13%), Positives = 32/93 (34%)

Query: 33  RTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKY 92
            T  +   +  +R      E  +   G    ++     +    +       +    +++ 
Sbjct: 164 DTDPNAVEAGRFRLVNFVNEVGLEPIGDNLFRETQASGAPVPGDPKEDGYGSIMQAMLEA 223

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
            NV+ + E  ++    R Y  N + I+ S +M 
Sbjct: 224 SNVDPVKEMTELIAAQRSYEMNSKVIQASDEMA 256



 Score = 43.7 bits (101), Expect = 0.008,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 26/64 (40%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          + S  IA +G+A Q   + +I+ N+AN  TTG   G   +       +  +     +   
Sbjct: 3  MKSLSIAATGMAAQQTNLDVIANNMANINTTGFKRGRAEFADLMYVADRAVGVPNMLNQA 62

Query: 65 KIGV 68
           I  
Sbjct: 63 VIPE 66


>gi|170755438|ref|YP_001782346.1| flagellar hook-associated protein FlgK [Clostridium botulinum B1
          str. Okra]
 gi|169120650|gb|ACA44486.1| flagellar hook-associated protein FlgK [Clostridium botulinum B1
          str. Okra]
          Length = 621

 Score = 54.9 bits (130), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 28/78 (35%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  L  + +I  SG+  Q   +   S NIANA T G +      +      +  M+ + G
Sbjct: 1  MSGLFGTLNIGKSGMFAQQGALNTTSHNIANANTEGYSRQRVELQTTRPYCKPSMNSAAG 60

Query: 61 VRVKKIGVDQSTFVEEFD 78
                GV         D
Sbjct: 61 PGQVGTGVQIVAINRVRD 78



 Score = 38.7 bits (88), Expect = 0.27,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 20/41 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             V++  E A++ + N  Y AN + I     ++   ++ L+
Sbjct: 580 SGVSMDEEFANLVQFNHCYQANAKIISTVDQLLDVVINGLK 620


>gi|23500854|ref|NP_700294.1| flagellar hook protein FlgE [Brucella suis 1330]
 gi|38257619|sp|Q8FUS9|FLGE_BRUSU RecName: Full=Flagellar hook protein FlgE
 gi|23464518|gb|AAN34299.1| flagellar hook protein FlgE [Brucella suis 1330]
          Length = 396

 Score = 54.9 bits (130), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 37/111 (33%), Gaps = 2/111 (1%)

Query: 25  ISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVA 84
           +  + A      +      YR    +       +       +   +S  V    P     
Sbjct: 286 VGNDGAVVAVYENGTQKVLYRIPLANVASPNRMTVVSGNIFLPSAESGDVRLGFPQGDGM 345

Query: 85  N--ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
               SG ++  N ++  E  DM E  R Y AN +  +   ++M   ++L R
Sbjct: 346 GKIMSGTLEESNADIAQELTDMIEAQRSYTANSKVFQTGSELMDVLVNLKR 396



 Score = 44.5 bits (103), Expect = 0.004,   Method: Composition-based stats.
 Identities = 18/90 (20%), Positives = 30/90 (33%), Gaps = 2/90 (2%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG- 60
            L        SG+  Q+ R+  +++NIANA T G       +    +      + SG  
Sbjct: 1  MSLYGMMRTGVSGMNAQANRLSTVADNIANASTVGYKRAETQFSSLVLPSTAGQYNSGSV 60

Query: 61 -VRVKKIGVDQSTFVEEFDPGHPVANASGI 89
             V+    DQ              + +G 
Sbjct: 61 LTDVRYGISDQGGIRSTSSTTDLAIDGNGY 90


>gi|254227985|ref|ZP_04921415.1| flagellar basal-body rod protein FlgG [Vibrio sp. Ex25]
 gi|151939481|gb|EDN58309.1| flagellar basal-body rod protein FlgG [Vibrio sp. Ex25]
          Length = 261

 Score = 54.9 bits (130), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 25/78 (32%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                  +   GG   ++                      G ++  NV V+ E  DM  T
Sbjct: 177 KFINPAGLEAVGGNLFRETEASGPADELIAGEDGAGLIKQGALEGSNVQVVEEMVDMITT 236

Query: 108 NRLYMANLQTIKQSHDMM 125
            R Y  N + +  + DM+
Sbjct: 237 QRAYEMNAKVVSAADDML 254



 Score = 41.0 bits (94), Expect = 0.053,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 28/72 (38%), Gaps = 4/72 (5%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          + ++  ++ +G+A Q  +M  IS N+AN  T G       +          +    G +V
Sbjct: 1  MHSALWVSKTGMAAQDTKMTAISNNLANVNTVGFKRDRVVF----EDLFYSIQRQPGAQV 56

Query: 64 KKIGVDQSTFVE 75
           ++    S    
Sbjct: 57 DQVNEVPSGIQL 68


>gi|33592479|ref|NP_880123.1| flagellar hook protein FlgE [Bordetella pertussis Tohama I]
 gi|33572125|emb|CAE41667.1| flagellar hook protein FlgE [Bordetella pertussis Tohama I]
 gi|332381896|gb|AEE66743.1| flagellar hook protein FlgE [Bordetella pertussis CS]
          Length = 473

 Score = 54.9 bits (130), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 23/42 (54%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           ++  NV++  E  +M    R Y AN QTIK   ++M   +++
Sbjct: 431 LEASNVDMSRELVNMIVAQRTYQANAQTIKTQDEVMQVLMNM 472



 Score = 34.1 bits (76), Expect = 6.5,   Method: Composition-based stats.
 Identities = 12/33 (36%), Positives = 17/33 (51%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          SGL   S  + +I  NIAN+ T G   G+  + 
Sbjct: 8  SGLNAASQNLDVIGNNIANSGTVGFKSGAASFA 40


>gi|254456854|ref|ZP_05070282.1| conserved domain protein [Campylobacterales bacterium GD 1]
 gi|207085646|gb|EDZ62930.1| conserved domain protein [Campylobacterales bacterium GD 1]
          Length = 419

 Score = 54.9 bits (130), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 19/43 (44%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            ++  NV +     D+    R Y AN ++I  +  MM   L +
Sbjct: 375 HLEGSNVQMTTGLTDLIIFQRAYDANSKSITTADQMMQKALQM 417


>gi|124268254|ref|YP_001022258.1| flagellar basal body and hook protein [Methylibium petroleiphilum
           PM1]
 gi|124261029|gb|ABM96023.1| flagellar basal body and hook protein [Methylibium petroleiphilum
           PM1]
          Length = 420

 Score = 54.9 bits (130), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 32/83 (38%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
               + +   G              V     G+     SG ++  N+++  E  +M    
Sbjct: 337 FRNPQGLQPLGNNVWATTFTSGDPVVGAAGDGNFGVLQSGALEESNIDLTGELVNMITAQ 396

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R+Y AN QT+K    MM T ++L
Sbjct: 397 RVYQANAQTVKTQDSMMQTLVNL 419


>gi|117619599|ref|YP_857341.1| flagellar basal body rod protein FlgG [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|117561006|gb|ABK37954.1| flagellar basal-body rod protein FlgG [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
          Length = 262

 Score = 54.9 bits (130), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 12/82 (14%), Positives = 26/82 (31%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +   G     +     +                G+++  NVNV  E  ++ +  
Sbjct: 179 FVNASGLQPMGENMFVETQSSGAPVQGVAGTDGLGVIKQGMLETSNVNVTEELVNLIQAQ 238

Query: 109 RLYMANLQTIKQSHDMMTTTLD 130
           R+Y  N + +     MM+  + 
Sbjct: 239 RVYEMNSKVLSAVDGMMSFLIQ 260



 Score = 45.2 bits (105), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/108 (17%), Positives = 35/108 (32%), Gaps = 6/108 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +  +  I+ +GL  Q   + + S N+ANA T G        + + I  + +         
Sbjct: 1   MNPALWISKTGLDAQQTNISVTSNNLANASTVG------YKKSRAIFEDLLYQNINQPGG 54

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
           +     +         G  V          NV     + D+  + R Y
Sbjct: 55  RSSADTERPSGLMLGAGAKVVATQKNHSQGNVQTTDNSLDLMISGRGY 102


>gi|160876201|ref|YP_001555517.1| flagellar basal body rod protein FlgG [Shewanella baltica OS195]
 gi|160861723|gb|ABX50257.1| flagellar basal-body rod protein FlgG [Shewanella baltica OS195]
 gi|315268391|gb|ADT95244.1| flagellar basal-body rod protein FlgG [Shewanella baltica OS678]
          Length = 262

 Score = 54.9 bits (130), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 15/81 (18%), Positives = 27/81 (33%)

Query: 46  RKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
                    +   G     + G   +            A   G ++  NVNV  E  ++ 
Sbjct: 176 MTDFINPSGLDPMGQNLYTETGASGTPIQGTASLDGMGAIRQGALETSNVNVTEELVNLI 235

Query: 106 ETNRLYMANLQTIKQSHDMMT 126
           E+ R+Y  N + I     M++
Sbjct: 236 ESQRIYEMNSKVISAVDQMLS 256



 Score = 39.5 bits (90), Expect = 0.18,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  +  I+ +GL  Q   + +IS N+ANA T G       +
Sbjct: 1  MHPALWISKTGLDAQQTDIAVISNNVANASTVGYKKSRAVF 41


>gi|126175144|ref|YP_001051293.1| flagellar basal body rod protein FlgG [Shewanella baltica OS155]
 gi|217972600|ref|YP_002357351.1| flagellar basal body rod protein FlgG [Shewanella baltica OS223]
 gi|304409976|ref|ZP_07391595.1| flagellar basal-body rod protein FlgG [Shewanella baltica OS183]
 gi|307302311|ref|ZP_07582069.1| flagellar basal-body rod protein FlgG [Shewanella baltica BA175]
 gi|125998349|gb|ABN62424.1| flagellar basal-body rod protein FlgG [Shewanella baltica OS155]
 gi|217497735|gb|ACK45928.1| flagellar basal-body rod protein FlgG [Shewanella baltica OS223]
 gi|304351385|gb|EFM15784.1| flagellar basal-body rod protein FlgG [Shewanella baltica OS183]
 gi|306914349|gb|EFN44770.1| flagellar basal-body rod protein FlgG [Shewanella baltica BA175]
          Length = 262

 Score = 54.9 bits (130), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 15/81 (18%), Positives = 27/81 (33%)

Query: 46  RKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
                    +   G     + G   +            A   G ++  NVNV  E  ++ 
Sbjct: 176 MTDFINPSGLDPMGQNLYTETGASGTPIQGTASLDGMGAIRQGALETSNVNVTEELVNLI 235

Query: 106 ETNRLYMANLQTIKQSHDMMT 126
           E+ R+Y  N + I     M++
Sbjct: 236 ESQRIYEMNSKVISAVDQMLS 256



 Score = 39.1 bits (89), Expect = 0.18,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  +  I+ +GL  Q   + +IS N+ANA T G       +
Sbjct: 1  MHPALWISKTGLDAQQTDIAVISNNVANASTVGYKKSRAVF 41


>gi|258514026|ref|YP_003190248.1| hypothetical protein Dtox_0711 [Desulfotomaculum acetoxidans DSM
           771]
 gi|257777731|gb|ACV61625.1| protein of unknown function DUF1078 domain protein
           [Desulfotomaculum acetoxidans DSM 771]
          Length = 262

 Score = 54.9 bits (130), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 14/103 (13%), Positives = 26/103 (25%)

Query: 29  IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASG 88
           +      G                  +         +                  +   G
Sbjct: 157 VTVINGAGMKEEIANISIYNFINPAGLIAQDNKLYLQTEQSGEAAEGAPGTDGYGSLRQG 216

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             +  NV+++ E   + E  R Y  N ++IK + DM      L
Sbjct: 217 FTEMSNVDLIQEMVRLIEAQRAYEINARSIKTADDMWGMANSL 259



 Score = 39.1 bits (89), Expect = 0.23,   Method: Composition-based stats.
 Identities = 15/93 (16%), Positives = 27/93 (29%), Gaps = 7/93 (7%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDP-------YRRKTISFEEVMH 56
          +I +  I  S L      +   + NIAN  T                Y  +  ++     
Sbjct: 1  MIKTLGIGASALNANQTYIDSAANNIANVNTDEYKAERTRFTDLLYNYYYRGTTYPAPTV 60

Query: 57 GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGI 89
                    GV      + F+PG     ++ +
Sbjct: 61 DEKATESSGNGVRIGEVKKVFEPGTIKETSNSM 93


>gi|167464160|ref|ZP_02329249.1| flagellar basal body rod protein FlgG [Paenibacillus larvae subsp.
           larvae BRL-230010]
          Length = 270

 Score = 54.9 bits (130), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 13/65 (20%), Positives = 27/65 (41%)

Query: 69  DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
           D      +          +G ++  NV++  E  +M    R + AN + I  S +++   
Sbjct: 206 DPGISTPKNAETGTGTLMTGSLEMSNVDLTSEFTEMIVAQRGFQANSRIITTSDEVLQEV 265

Query: 129 LDLLR 133
           ++L R
Sbjct: 266 VNLKR 270



 Score = 34.8 bits (78), Expect = 4.0,   Method: Composition-based stats.
 Identities = 10/33 (30%), Positives = 17/33 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ S +   SG+     ++ +I  NIAN  T G
Sbjct: 1  MLRSMYSGISGMRGFQTKLDVIGNNIANVNTIG 33


>gi|153001470|ref|YP_001367151.1| flagellar basal body rod protein FlgG [Shewanella baltica OS185]
 gi|151366088|gb|ABS09088.1| flagellar basal-body rod protein FlgG [Shewanella baltica OS185]
          Length = 262

 Score = 54.9 bits (130), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 15/81 (18%), Positives = 27/81 (33%)

Query: 46  RKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
                    +   G     + G   +            A   G ++  NVNV  E  ++ 
Sbjct: 176 MTDFINPSGLDPMGQNLYTETGASGTPIQGTASLDGMGAIRQGALETSNVNVTEELVNLI 235

Query: 106 ETNRLYMANLQTIKQSHDMMT 126
           E+ R+Y  N + I     M++
Sbjct: 236 ESQRIYEMNSKVISAVDQMLS 256



 Score = 39.1 bits (89), Expect = 0.18,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  +  I+ +GL  Q   + +IS N+ANA T G       +
Sbjct: 1  MHPALWISKTGLDAQQTDIAVISNNVANASTVGYKKSRAVF 41


>gi|82702453|ref|YP_412019.1| flagellar hook protein FlgE [Nitrosospira multiformis ATCC 25196]
 gi|82410518|gb|ABB74627.1| conserved hypothetical protein [Nitrosospira multiformis ATCC
           25196]
          Length = 406

 Score = 54.9 bits (130), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 16/47 (34%), Positives = 25/47 (53%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
            +G V+  NV +  E  +M    R+Y AN QTIK    ++ T ++L 
Sbjct: 360 QAGAVEDSNVELTSELVNMITAQRVYQANAQTIKTQDQILQTVVNLK 406


>gi|311030122|ref|ZP_07708212.1| Flagellar hook protein FlgE [Bacillus sp. m3-13]
          Length = 493

 Score = 54.9 bits (130), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 21/84 (25%), Positives = 35/84 (41%), Gaps = 2/84 (2%)

Query: 52  EEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANA--SGIVKYPNVNVLVETADMRETNR 109
           E +   S          D     E F PG   A +  SG ++  NV++  E  +M    R
Sbjct: 410 ENLFQQSNNSGTMDKNGDGIQLEEMFKPGDDGAASIISGTLEMSNVDLSEEFTEMITAQR 469

Query: 110 LYMANLQTIKQSHDMMTTTLDLLR 133
            + AN + I  S +++   ++L R
Sbjct: 470 GFQANTRIITTSDEILQELVNLKR 493


>gi|254464969|ref|ZP_05078380.1| flagellar hook protein FlgE [Rhodobacterales bacterium Y4I]
 gi|206685877|gb|EDZ46359.1| flagellar hook protein FlgE [Rhodobacterales bacterium Y4I]
          Length = 435

 Score = 54.9 bits (130), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 23/43 (53%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +   V+V  E  DM +T R Y +N + I+   +M+  T ++ R
Sbjct: 393 EESAVDVATELTDMIKTQRAYSSNAKVIQTVDEMLQETTNIKR 435



 Score = 41.4 bits (95), Expect = 0.045,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 33/77 (42%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            + +S +   SGL+  ++R+  IS+NIAN+ T G       +    +S     + +GGV
Sbjct: 1  MTISSSLNAGVSGLSANASRLASISDNIANSSTRGYKRVQTDFHSMVLSGSGGTYSAGGV 60

Query: 62 RVKKIGVDQSTFVEEFD 78
          R   + +          
Sbjct: 61 RTTNVRLIDERGPLVST 77


>gi|308050372|ref|YP_003913938.1| flagellar hook-basal body protein [Ferrimonas balearica DSM 9799]
 gi|307632562|gb|ADN76864.1| flagellar hook-basal body protein [Ferrimonas balearica DSM 9799]
          Length = 468

 Score = 54.9 bits (130), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 23/129 (17%), Positives = 47/129 (36%), Gaps = 2/129 (1%)

Query: 5   IASAHIANSGLAVQS-ARMQIISENIANAR-TTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
                ++  G  V     +++ +E + NA  + G             S E+ +   G   
Sbjct: 339 FEVTELSQDGATVGRLTNVEVTAEGLINATYSNGTQQALGKVALARFSNEQGLTQIGNTS 398

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
            K+        V E + G   +  S  ++  NV++  E  D+    R + AN + +  S+
Sbjct: 399 WKQSNDSGEPLVGEPNVGAFGSIRSAALEQSNVDLTTELVDLISAQRNFQANSRALDVSN 458

Query: 123 DMMTTTLDL 131
            +    L +
Sbjct: 459 QLSQNILQI 467



 Score = 41.0 bits (94), Expect = 0.053,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 16/39 (41%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          S +I+ SGL      +   S NIAN  T G       + 
Sbjct: 2  SFNISLSGLNAAQKDLNTTSNNIANVNTIGFKESRAEFA 40


>gi|296126376|ref|YP_003633628.1| fagellar hook-basal body protein [Brachyspira murdochii DSM 12563]
 gi|296018192|gb|ADG71429.1| fagellar hook-basal body protein [Brachyspira murdochii DSM 12563]
          Length = 282

 Score = 54.9 bits (130), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 19/42 (45%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            ++  NVN + E   M E  R Y  N +TI     ++   ++
Sbjct: 236 FLEMSNVNPVNEMVRMIEVQRAYELNSKTISTHDTLVGRVIN 277



 Score = 46.4 bits (108), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/74 (16%), Positives = 26/74 (35%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++   +   SG+  + AR+ +++ N+AN    G    +  ++             G V  
Sbjct: 1  MVRGVYTGASGMMAEQARLDVVANNLANVDKPGFKRDTVSFKSFPEMMAARTEDDGVVIF 60

Query: 64 KKIGVDQSTFVEEF 77
               D   +V   
Sbjct: 61 PLGSTDVRPYVGRM 74


>gi|148558720|ref|YP_001258004.1| flagellar hook protein FlgE [Brucella ovis ATCC 25840]
 gi|148370005|gb|ABQ62877.1| flagellar hook protein FlgE [Brucella ovis ATCC 25840]
          Length = 377

 Score = 54.9 bits (130), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 37/111 (33%), Gaps = 2/111 (1%)

Query: 25  ISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVA 84
           +  + A      +      YR    +       +       +   +S  V    P     
Sbjct: 267 VGNDGAVVAVYENGTQKVLYRIPLANVASPDRMTVVSGNIFLPSAESGDVRLGFPQGDGM 326

Query: 85  N--ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
               SG ++  N ++  E  DM E  R Y AN +  +   ++M   ++L R
Sbjct: 327 GKIMSGTLEESNADIAQELTDMIEAQRSYTANSKVFQTGSELMDVLVNLKR 377



 Score = 43.7 bits (101), Expect = 0.009,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 28/78 (35%), Gaps = 1/78 (1%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            L        SG+  Q+ R+  +++NIANA T G            +        + G 
Sbjct: 1  MSLYGMMRTGVSGMNAQANRLSTVADNIANASTVGYKRAET-QFSSLVLPSTAGQYNSGS 59

Query: 62 RVKKIGVDQSTFVEEFDP 79
           +  + +D + +     P
Sbjct: 60 VLTDLAIDGNGYFVVQGP 77


>gi|254720773|ref|ZP_05182584.1| flagellar hook protein FlgE [Brucella sp. 83/13]
 gi|265985831|ref|ZP_06098566.1| flagellar hook protein flgE [Brucella sp. 83/13]
 gi|306840136|ref|ZP_07472921.1| flagellar hook protein FlgE [Brucella sp. NF 2653]
 gi|264664423|gb|EEZ34684.1| flagellar hook protein flgE [Brucella sp. 83/13]
 gi|306404781|gb|EFM61075.1| flagellar hook protein FlgE [Brucella sp. NF 2653]
          Length = 396

 Score = 54.9 bits (130), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 37/111 (33%), Gaps = 2/111 (1%)

Query: 25  ISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVA 84
           +  + A      +      YR    +       +       +   +S  V    P     
Sbjct: 286 VGNDGAVVAVYENGTQKVLYRIPLANVASPDRMTVVSGNVFLPSAESGDVRLGFPQGDGM 345

Query: 85  N--ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
               SG ++  N ++  E  DM E  R Y AN +  +   +++   ++L R
Sbjct: 346 GKIMSGTLEESNADIAQELTDMIEAQRSYTANSKVFQTGSELIDVLVNLKR 396



 Score = 44.9 bits (104), Expect = 0.004,   Method: Composition-based stats.
 Identities = 18/90 (20%), Positives = 30/90 (33%), Gaps = 2/90 (2%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG- 60
            L        SG+  Q+ R+  +++NIANA T G       +    +      + SG  
Sbjct: 1  MSLYGMMRTGVSGMNAQANRLSTVADNIANASTVGYKRAETQFSSLVLPSTAGQYNSGSV 60

Query: 61 -VRVKKIGVDQSTFVEEFDPGHPVANASGI 89
             V+    DQ              + +G 
Sbjct: 61 LTDVRYGISDQGGIRSTSSTTDLAIDGNGY 90


>gi|170725957|ref|YP_001759983.1| flagellar basal body rod protein FlgG [Shewanella woodyi ATCC
           51908]
 gi|169811304|gb|ACA85888.1| flagellar basal-body rod protein FlgG [Shewanella woodyi ATCC
           51908]
          Length = 262

 Score = 54.9 bits (130), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 27/78 (34%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +   G     + G   +            A   G ++  NVNV  E  ++ E+ 
Sbjct: 179 FINPSGLDPMGQNLYTETGASGTPIQGTASLDGMGAVRQGALETSNVNVTEELVNLIESQ 238

Query: 109 RLYMANLQTIKQSHDMMT 126
           R+Y  N + I     M++
Sbjct: 239 RIYEMNSKVISAVDQMLS 256



 Score = 39.5 bits (90), Expect = 0.14,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  +  I+ +GL  Q   + +IS N+ANA T G       +
Sbjct: 1  MHPALWISKTGLDAQQTDISVISNNVANASTVGYKKSRAVF 41


>gi|24374755|ref|NP_718798.1| flagellar basal body rod protein FlgG [Shewanella oneidensis MR-1]
 gi|24349419|gb|AAN56242.1|AE015761_12 flagellar basal-body rod protein FlgG [Shewanella oneidensis MR-1]
          Length = 262

 Score = 54.9 bits (130), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 26/80 (32%)

Query: 46  RKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
                    +   G     + G   +            A   G ++  NVNV  E  ++ 
Sbjct: 176 MTDFINPSGLDPMGQNLYTETGASGTPIQGTASLDGMGAIRQGALETSNVNVTEELVNLI 235

Query: 106 ETNRLYMANLQTIKQSHDMM 125
           E+ R+Y  N + I     M+
Sbjct: 236 ESQRIYEMNSKVISAVDQML 255



 Score = 39.9 bits (91), Expect = 0.13,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  +  I+ +GL  Q   + +IS N+ANA T G       +
Sbjct: 1  MHPALWISKTGLDAQQTDISVISNNVANASTVGYKKSRAVF 41


>gi|260466603|ref|ZP_05812791.1| flagellar basal body FlaE domain protein [Mesorhizobium
           opportunistum WSM2075]
 gi|259029609|gb|EEW30897.1| flagellar basal body FlaE domain protein [Mesorhizobium
           opportunistum WSM2075]
          Length = 418

 Score = 54.9 bits (130), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 22/44 (50%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  NV++  E  DM    R Y AN +  +   D+M   ++L R
Sbjct: 375 LENSNVDIAEELTDMIAAQRSYTANSKVFQTGSDLMDVLVNLKR 418



 Score = 44.5 bits (103), Expect = 0.004,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 29/77 (37%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            L        SG+  Q+ R+   ++NIAN+ TTG    S  +    +      + SGGV
Sbjct: 1  MSLYGMMRTGVSGMNAQANRLSTTADNIANSDTTGYKRSSAEFSTLIMPSTGGAYNSGGV 60

Query: 62 RVKKIGVDQSTFVEEFD 78
                      V ++ 
Sbjct: 61 TTTIRQAVSDPGVLQYT 77


>gi|157376214|ref|YP_001474814.1| flagellar basal body rod protein FlgG [Shewanella sediminis
           HAW-EB3]
 gi|157318588|gb|ABV37686.1| flagellar basal-body rod protein FlgG [Shewanella sediminis
           HAW-EB3]
          Length = 262

 Score = 54.9 bits (130), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 15/81 (18%), Positives = 27/81 (33%)

Query: 46  RKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
                    +   G     + G   +            A   G ++  NVNV  E  ++ 
Sbjct: 176 MTDFINPSGLDPMGQNLYTETGASGTPIQGTASLDGMGAIRQGALETSNVNVTEELVNLI 235

Query: 106 ETNRLYMANLQTIKQSHDMMT 126
           E+ R+Y  N + I     M++
Sbjct: 236 ESQRIYEMNSKVISAVDQMLS 256



 Score = 39.5 bits (90), Expect = 0.14,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  +  I+ +GL  Q   + +IS N+ANA T G       +
Sbjct: 1  MHPALWISKTGLDAQQTDISVISNNVANASTVGYKKSRAVF 41


>gi|319781681|ref|YP_004141157.1| flagellar basal-body rod protein FlgG [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317167569|gb|ADV11107.1| flagellar basal-body rod protein FlgG [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 262

 Score = 54.9 bits (130), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 17/122 (13%), Positives = 38/122 (31%), Gaps = 3/122 (2%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           I + ++    + V    +    +  A      D       +    + E  +   G    +
Sbjct: 137 IPAINVPVDAVEV---IVNKTGQVFARIDGQTDLQNLGQLQIANFANEAGLAPLGDNLFQ 193

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           +        V             G ++  NV+ + E  ++    R Y  N + I+ + DM
Sbjct: 194 ETTASGPANVGVPGDPGFATIQQGYLEASNVDPVKEITELISAQRAYEMNSKVIQAADDM 253

Query: 125 MT 126
            +
Sbjct: 254 AS 255



 Score = 44.5 bits (103), Expect = 0.005,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 24/67 (35%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          + +  IA +G+  Q   +++I+ NIAN  TTG       +       +            
Sbjct: 1  MKALAIAATGMNAQQTNLEVIANNIANINTTGYKRARAEFSDLLYQVDRTQGVPNRSNAS 60

Query: 65 KIGVDQS 71
           +    S
Sbjct: 61 LVPEGVS 67


>gi|237796175|ref|YP_002863727.1| flagellar hook-associated protein FlgK [Clostridium botulinum Ba4
          str. 657]
 gi|229264184|gb|ACQ55217.1| flagellar hook-associated protein FlgK [Clostridium botulinum Ba4
          str. 657]
          Length = 622

 Score = 54.9 bits (130), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 28/78 (35%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  L  + +I  SG+  Q   +   S NIANA T G +      +      +  M+ + G
Sbjct: 1  MSGLFGTLNIGKSGMFAQQGALNTTSHNIANANTEGYSRQRVELQTTRPYCKPSMNSAAG 60

Query: 61 VRVKKIGVDQSTFVEEFD 78
                GV         D
Sbjct: 61 PGQVGTGVQIVAINRVRD 78



 Score = 40.2 bits (92), Expect = 0.098,   Method: Composition-based stats.
 Identities = 15/105 (14%), Positives = 35/105 (33%), Gaps = 2/105 (1%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           N     +  G+        +    M+      +  +GVD++                   
Sbjct: 517 NPNDEFEFNGTTLNTIGKDTNGMTMNIYFNDIIGGLGVDEAEAQRMVKNQATSLAGFQQA 576

Query: 91  KYP--NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +     V++  E A++ + N  Y AN + I     ++   ++ L+
Sbjct: 577 RDSVSGVSMDEEFANLVQFNHCYQANAKIISTVDQLLDVVINGLK 621


>gi|168183196|ref|ZP_02617860.1| flagellar hook-associated protein FlgK [Clostridium botulinum Bf]
 gi|182673575|gb|EDT85536.1| flagellar hook-associated protein FlgK [Clostridium botulinum Bf]
          Length = 622

 Score = 54.9 bits (130), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 28/78 (35%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  L  + +I  SG+  Q   +   S NIANA T G +      +      +  M+ + G
Sbjct: 1  MSGLFGTLNIGKSGMFAQQGALNTTSHNIANANTEGYSRQRVELQTTRPYCKPSMNSAAG 60

Query: 61 VRVKKIGVDQSTFVEEFD 78
                GV         D
Sbjct: 61 PGQVGTGVQIVAINRVRD 78



 Score = 40.2 bits (92), Expect = 0.098,   Method: Composition-based stats.
 Identities = 15/105 (14%), Positives = 35/105 (33%), Gaps = 2/105 (1%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           N     +  G+        +    M+      +  +GVD++                   
Sbjct: 517 NPNDEFEFNGTTLNTIGKDTNGMTMNIYFNDIIGGLGVDEAEAQRMVKNQATSLAGFQQA 576

Query: 91  KYP--NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +     V++  E A++ + N  Y AN + I     ++   ++ L+
Sbjct: 577 RDSVSGVSMDEEFANLVQFNHCYQANAKIISTVDQLLDVVINGLK 621


>gi|114330361|ref|YP_746583.1| flagellar hook protein FlgE [Nitrosomonas eutropha C91]
 gi|114307375|gb|ABI58618.1| flagellar basal body FlaE domain protein [Nitrosomonas eutropha
           C91]
          Length = 419

 Score = 54.9 bits (130), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 16/83 (19%), Positives = 34/83 (40%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            S    +   G  +  +        +   + G   +  S  V+  NV++  E   +  T 
Sbjct: 337 FSNPNGLKPMGNNQWAETAESGLPLIGTPETGVLGSLQSSAVEESNVDLTSELVSLIMTQ 396

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R+Y AN +TI+    +M + +++
Sbjct: 397 RVYQANAKTIQTQDAVMQSIMNI 419



 Score = 34.1 bits (76), Expect = 7.5,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 29/81 (35%), Gaps = 5/81 (6%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
                SGL   SA++ +   NIANA T G             S        GG     I
Sbjct: 2  GFQHGLSGLKAASAKLDVTGNNIANANTVGFKQSQA-----QFSDVFANSLGGGKNQIGI 56

Query: 67 GVDQSTFVEEFDPGHPVANAS 87
          G   +   +EF  G+  ++ +
Sbjct: 57 GTQVAAIAQEFAQGNVTSSDN 77


>gi|146278639|ref|YP_001168798.1| flagellar basal body rod protein FlgG [Rhodobacter sphaeroides ATCC
           17025]
 gi|145556880|gb|ABP71493.1| flagellar basal-body rod protein FlgG [Rhodobacter sphaeroides ATCC
           17025]
          Length = 261

 Score = 54.9 bits (130), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 10/78 (12%), Positives = 25/78 (32%)

Query: 55  MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
           +   G     +     +                G ++  +V+ + E  ++ +  R Y  N
Sbjct: 184 LEAIGSNLFVETAASGAPIAGTPGEDGFGTLRQGYLEESSVDSVQEITELIKAQRGYELN 243

Query: 115 LQTIKQSHDMMTTTLDLL 132
            + I  +  M+  T  + 
Sbjct: 244 AKVITAADQMLAATAQVK 261



 Score = 48.3 bits (113), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 23/41 (56%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          + +  IA +G++ Q  R+ +IS N+AN  TTG  P    + 
Sbjct: 1  MKALQIAATGMSAQQTRVDVISNNLANMSTTGYNPRRADFA 41


>gi|254440385|ref|ZP_05053879.1| conserved domain protein [Octadecabacter antarcticus 307]
 gi|198255831|gb|EDY80145.1| conserved domain protein [Octadecabacter antarcticus 307]
          Length = 432

 Score = 54.9 bits (130), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 22/43 (51%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +    +V  E  ++ +T R Y +N + I+   +M+  T ++ R
Sbjct: 390 EESATDVAAELTNLIKTQRAYSSNAKVIQTVDEMLQETTNIKR 432



 Score = 38.7 bits (88), Expect = 0.24,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 48/104 (46%), Gaps = 5/104 (4%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             + +S + + +GLA  ++R+  IS+NIAN+ T G       +    +   +  + +GGV
Sbjct: 1   MTISSSFNASVAGLASNASRLATISDNIANSSTYGYKRVVADFHSMVVDGGKGKYTAGGV 60

Query: 62  RV--KKIGVDQSTFVEEFDPGHPVANASGIV---KYPNVNVLVE 100
            V  +++  ++   V   +         G++   +  +V+V  E
Sbjct: 61  GVTTQRLIDERGPLVATSNATDLAVRGRGMLPVTERSSVSVGSE 104


>gi|312794500|ref|YP_004027423.1| fagellar hook-basal body protein [Caldicellulosiruptor
           kristjanssonii 177R1B]
 gi|312876698|ref|ZP_07736678.1| fagellar hook-basal body protein [Caldicellulosiruptor
           lactoaceticus 6A]
 gi|311796538|gb|EFR12887.1| fagellar hook-basal body protein [Caldicellulosiruptor
           lactoaceticus 6A]
 gi|312181640|gb|ADQ41810.1| fagellar hook-basal body protein [Caldicellulosiruptor
           kristjanssonii 177R1B]
          Length = 255

 Score = 54.9 bits (130), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 19/44 (43%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            G ++  NVN + E  DM    R Y AN +      + +   ++
Sbjct: 207 QGYLEGSNVNSVQEMVDMISVLRAYEANQKAFTIQDETLQKAVN 250



 Score = 34.8 bits (78), Expect = 4.4,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 30/81 (37%), Gaps = 12/81 (14%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSD------------PYRRKTISF 51
          +I   + + SG+ +    M I + N+AN  TTG                   Y + +   
Sbjct: 1  MIRGIYTSASGMILNQKLMDITANNVANVSTTGFKRDVAQVESFRNMLVYRIYDKVSSPD 60

Query: 52 EEVMHGSGGVRVKKIGVDQST 72
            + + S G  V +I  D S 
Sbjct: 61 NAIGYMSLGSDVSRIVSDFSQ 81


>gi|304438499|ref|ZP_07398439.1| flagellar basal body and hook protein [Selenomonas sp. oral taxon
           149 str. 67H29BP]
 gi|304368582|gb|EFM22267.1| flagellar basal body and hook protein [Selenomonas sp. oral taxon
           149 str. 67H29BP]
          Length = 711

 Score = 54.9 bits (130), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 25/48 (52%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
               ++  NV++  + +DM  T R + +N + I  + +M+ T + + R
Sbjct: 664 TPSALEMSNVDLADQFSDMIVTQRGFQSNSKIITVADEMLETLISMKR 711



 Score = 40.6 bits (93), Expect = 0.080,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 18/58 (31%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
          ++ S     SGL     RM ++  NIAN  T G       +               G 
Sbjct: 1  MMRSMFSGVSGLKGHQTRMDVVGHNIANVNTVGYKASRVTFADTLYQTSSGASAPTGN 58


>gi|99082800|ref|YP_614954.1| flagellar basal body rod protein FlgG [Ruegeria sp. TM1040]
 gi|99039080|gb|ABF65692.1| Flagellar basal-body rod protein flgG [Ruegeria sp. TM1040]
          Length = 261

 Score = 54.9 bits (130), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 14/82 (17%), Positives = 27/82 (32%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +  + +   GG   K+          E             ++  +V+ + E  ++ E  
Sbjct: 178 FTNPKGLEAMGGNLFKQTEASGQPNTTEPGADGIGFLRQKYLEDSSVDAVREITELIEAQ 237

Query: 109 RLYMANLQTIKQSHDMMTTTLD 130
           R Y  N + I     MM+ T  
Sbjct: 238 RGYEMNSKVISAVDQMMSATTQ 259



 Score = 45.6 bits (106), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 21/41 (51%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          + +  IA +G++ Q  R++ IS N+AN  TT        + 
Sbjct: 1  MRALKIAATGMSAQQLRVETISNNLANMNTTAYNARRAEFA 41


>gi|75675314|ref|YP_317735.1| flagellar basal body rod protein FlgG [Nitrobacter winogradskyi
           Nb-255]
 gi|74420184|gb|ABA04383.1| Protein of unknown function DUF1078 [Nitrobacter winogradskyi
           Nb-255]
          Length = 262

 Score = 54.5 bits (129), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 14/87 (16%), Positives = 27/87 (31%)

Query: 47  KTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
                +  +   G    K+            +           ++  NV V+ E +D+  
Sbjct: 176 TRFINKAGLQPVGDNNFKETPASGPFQDGIANLDGFGDMQQSNLEQANVEVVSEISDLIA 235

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
             R Y  N + I  +  M+ +   L R
Sbjct: 236 AQRAYEMNAKVISAADQMLQSAAALFR 262



 Score = 37.2 bits (84), Expect = 0.78,   Method: Composition-based stats.
 Identities = 15/41 (36%), Positives = 24/41 (58%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          + + + A +G+A Q   +Q+IS NIAN RTTG       ++
Sbjct: 1  MRALYTAATGMAAQELNVQVISNNIANLRTTGYKKQRAAFQ 41


>gi|260767767|ref|ZP_05876702.1| flagellar basal-body rod protein FlgG [Vibrio furnissii CIP 102972]
 gi|260617276|gb|EEX42460.1| flagellar basal-body rod protein FlgG [Vibrio furnissii CIP 102972]
 gi|315179401|gb|ADT86315.1| flagellar basal body rod protein FlgG [Vibrio furnissii NCTC 11218]
          Length = 262

 Score = 54.5 bits (129), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 23/72 (31%)

Query: 55  MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
           +   G       G                     +++  NVNV  E  +M E  R+Y  N
Sbjct: 185 LEPIGQNLYLPTGASGDPQEGVPGLDGLGNVRQSMLESSNVNVTEELVNMIEAQRVYEMN 244

Query: 115 LQTIKQSHDMMT 126
            + I     MM+
Sbjct: 245 SKVISAVDKMMS 256



 Score = 39.9 bits (91), Expect = 0.13,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 19/41 (46%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  +  ++ +GL  Q   +  IS N+ANA T G       +
Sbjct: 1  MQPALWVSKTGLDAQQTNIATISNNLANASTVGFKKSRAVF 41


>gi|197104381|ref|YP_002129758.1| flagellar basal-body rod protein FlgG [Phenylobacterium zucineum
           HLK1]
 gi|196477801|gb|ACG77329.1| flagellar basal-body rod protein FlgG [Phenylobacterium zucineum
           HLK1]
          Length = 262

 Score = 54.5 bits (129), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 12/78 (15%), Positives = 23/78 (29%)

Query: 55  MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
           +   G    K+                      G  +  NV+ + E   +    R Y  N
Sbjct: 184 LQAQGSNLFKETAASGPPTNGIPGENGVGELIQGYTEASNVDAVAEITALIVAQRAYEMN 243

Query: 115 LQTIKQSHDMMTTTLDLL 132
            + I  + +M+ T   + 
Sbjct: 244 SKVISTADNMLATANQVK 261



 Score = 40.2 bits (92), Expect = 0.093,   Method: Composition-based stats.
 Identities = 12/62 (19%), Positives = 23/62 (37%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          + +   A +G+A Q   +++IS NIAN  T         ++       E        +  
Sbjct: 1  MQALRTAATGMAAQQLNVEVISNNIANMNTVAFKRQRAEFQDLLYQTFEAAGVQSSDQGT 60

Query: 65 KI 66
           +
Sbjct: 61 IV 62


>gi|119503644|ref|ZP_01625727.1| flagellar hook protein [marine gamma proteobacterium HTCC2080]
 gi|119460706|gb|EAW41798.1| flagellar hook protein [marine gamma proteobacterium HTCC2080]
          Length = 410

 Score = 54.5 bits (129), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 15/98 (15%), Positives = 28/98 (28%)

Query: 34  TTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
           T G +         +      +   GG    +        +            S  V+  
Sbjct: 312 TNGQSRAIGQVALASFRNNNGLQPVGGSNYVESFGSGGPNIGVPGNSGRGNIQSSAVEQA 371

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           NV++  E  ++    R + AN Q I          ++L
Sbjct: 372 NVDITQELVNLIVAQRNFQANAQVISTEDQATQAVINL 409



 Score = 35.2 bits (79), Expect = 2.8,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 18/39 (46%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          +   A SG+    A + +IS NIANA T G       + 
Sbjct: 2  AFSTAISGIKAAQANLDVISNNIANASTVGFKASRAQFA 40


>gi|320107042|ref|YP_004182632.1| flagellar basal-body rod protein FlgG [Terriglobus saanensis
           SP1PR4]
 gi|319925563|gb|ADV82638.1| flagellar basal-body rod protein FlgG [Terriglobus saanensis
           SP1PR4]
          Length = 262

 Score = 54.5 bits (129), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 21/132 (15%), Positives = 43/132 (32%), Gaps = 2/132 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
           D L  +  I  +  +V  +   +++   A   +T  T           +   +    G +
Sbjct: 133 DLLTPAISIPANATSVTISAYGVVTA--AVPGSTTGTQLGTIQLATFPNPGGLNSLGGNL 190

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
               +    +                  ++  NV+V+ E   M    R Y +N + I  +
Sbjct: 191 FQPTLASGNAITDLPGGNSGMGTLQQTYLENSNVDVVEEFVQMVMAQRAYESNSKVIHVA 250

Query: 122 HDMMTTTLDLLR 133
            DM +    L+R
Sbjct: 251 DDMYSQINGLIR 262



 Score = 41.8 bits (96), Expect = 0.030,   Method: Composition-based stats.
 Identities = 12/33 (36%), Positives = 22/33 (66%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          +I + + A SG++ Q A +  I+ N+AN+ T+G
Sbjct: 1  MIRALYTAASGMSAQQANLDTIANNLANSATSG 33


>gi|237796094|ref|YP_002863646.1| flagellar hook protein FlgE [Clostridium botulinum Ba4 str. 657]
 gi|229263494|gb|ACQ54527.1| flagellar hook protein FlgE [Clostridium botulinum Ba4 str. 657]
          Length = 332

 Score = 54.5 bits (129), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 20/129 (15%), Positives = 43/129 (33%), Gaps = 5/129 (3%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           + S  I   GL V S      +  +               +     ++   +    +   
Sbjct: 209 VQSFTIDKDGLIVASLVDGTSAA-LGQIAMASFKNEGGLEKMGKNLYKNSANSGEAIIRS 267

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
             GVD +               +G+++  NV++  E  +M   NR + A  + I    ++
Sbjct: 268 GRGVDAANDNS----KGYGDMLNGMIEMSNVDLAEEFTEMIVANRAFQACGKMITTGDEI 323

Query: 125 MTTTLDLLR 133
           +   ++L R
Sbjct: 324 LQELVNLKR 332



 Score = 39.9 bits (91), Expect = 0.11,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 22/42 (52%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S +   SGL  Q  ++ ++  NIANA TT     S  ++
Sbjct: 1  MLRSMYSGISGLKAQQTKLDVVGNNIANANTTAFKSQSIRFQ 42


>gi|242280400|ref|YP_002992529.1| hypothetical protein Desal_2938 [Desulfovibrio salexigens DSM 2638]
 gi|242123294|gb|ACS80990.1| protein of unknown function DUF1078 domain protein [Desulfovibrio
           salexigens DSM 2638]
          Length = 528

 Score = 54.5 bits (129), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 15/79 (18%), Positives = 27/79 (34%)

Query: 55  MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
           +   G                        +  S  ++  NV++  E A M  T R + AN
Sbjct: 450 LRREGSNYFSATIDSGEAIQGVARKDGLGSVVSNSLETSNVDLADEFAYMILTQRGFQAN 509

Query: 115 LQTIKQSHDMMTTTLDLLR 133
            + I  +  M+ T L + +
Sbjct: 510 SKGITTTDSMINTALGIKK 528


>gi|168182737|ref|ZP_02617401.1| flagellar hook protein FlgE [Clostridium botulinum Bf]
 gi|182674150|gb|EDT86111.1| flagellar hook protein FlgE [Clostridium botulinum Bf]
          Length = 332

 Score = 54.5 bits (129), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 20/129 (15%), Positives = 43/129 (33%), Gaps = 5/129 (3%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           + S  I   GL V S      +  +               +     ++   +    +   
Sbjct: 209 VQSFTIDKDGLIVASLVDGTSAA-LGQIAMASFKNEGGLEKMGKNLYKNSANSGEAIIRS 267

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
             GVD +               +G+++  NV++  E  +M   NR + A  + I    ++
Sbjct: 268 GRGVDAANDNS----KGYGDMLNGMIEMSNVDLAEEFTEMIVANRAFQACGKMITTGDEI 323

Query: 125 MTTTLDLLR 133
           +   ++L R
Sbjct: 324 LQELVNLKR 332



 Score = 39.9 bits (91), Expect = 0.11,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 22/42 (52%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S +   SGL  Q  ++ ++  NIANA TT     S  ++
Sbjct: 1  MLRSMYSGISGLKAQQTKLDVVGNNIANANTTAFKSQSIRFQ 42


>gi|328948268|ref|YP_004365605.1| flagellar basal-body rod protein FlgF [Treponema succinifaciens DSM
           2489]
 gi|328448592|gb|AEB14308.1| flagellar basal-body rod protein FlgF [Treponema succinifaciens DSM
           2489]
          Length = 266

 Score = 54.5 bits (129), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 16/42 (38%), Positives = 22/42 (52%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
            G  +  NVNV+ E   M E NR Y AN ++++    MM T 
Sbjct: 216 QGYTEASNVNVVNEMVQMIEVNRAYEANQKSVQTEDSMMDTL 257



 Score = 46.0 bits (107), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/33 (42%), Positives = 19/33 (57%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          +I   +I  SG+  Q  R+  IS N+AN  TTG
Sbjct: 1  MIRGWYIGASGMNAQQNRLDTISNNLANVDTTG 33


>gi|225620340|ref|YP_002721597.1| flagellar hook protein FlgE [Brachyspira hyodysenteriae WA1]
 gi|225215159|gb|ACN83893.1| flagellar hook protein FlgE [Brachyspira hyodysenteriae WA1]
          Length = 423

 Score = 54.5 bits (129), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 32/79 (40%)

Query: 55  MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
           +  +G     +     +  +         +  +G ++  NV++  +  DM  T R + +N
Sbjct: 345 LEKAGDTLFVQSNNSGAANIGTAAAEGRGSIKAGTLEMSNVDLSEQFTDMIVTQRGFQSN 404

Query: 115 LQTIKQSHDMMTTTLDLLR 133
            +TI  +  M+   + L R
Sbjct: 405 ARTITTADQMLQEVIALKR 423


>gi|68164546|gb|AAY87275.1| predicted flagellar hook protein [uncultured bacterium BAC17H8]
          Length = 1387

 Score = 54.5 bits (129), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 13/83 (15%), Positives = 33/83 (39%)

Query: 49   ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
             + +  +   G     +  V  +  V E          SG ++  NV++  E  ++    
Sbjct: 1303 FNNQNGLKQIGNATYTETAVSGTPQVGEAGSEGFGNILSGSLERSNVDITEELVNLITAQ 1362

Query: 109  RLYMANLQTIKQSHDMMTTTLDL 131
            R + A+ + I+ +  +  T +++
Sbjct: 1363 RNFQASAKAIETTTGLTQTIINI 1385


>gi|183220587|ref|YP_001838583.1| flagellar hook protein FlgE [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
 gi|189910695|ref|YP_001962250.1| flagellar hook protein FlgE [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Ames)']
 gi|167775371|gb|ABZ93672.1| Endoflagellar hook protein [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167779009|gb|ABZ97307.1| Flagellar hook protein FlgE [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
          Length = 464

 Score = 54.5 bits (129), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 32/85 (37%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +    ++  G              + E          +G+++  NV++  +  DM  T 
Sbjct: 380 FTNPAGLNKEGDTMYSFSLNSGEANIGEAGSQGRGKINAGLLEMSNVDLSDQFTDMIVTQ 439

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R + AN +TI  S  M+   L L R
Sbjct: 440 RGFQANSRTIVTSDQMIQEVLGLKR 464



 Score = 37.2 bits (84), Expect = 0.86,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 19/42 (45%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S +   SGL     RM +I  NI+N  T G       ++
Sbjct: 1  MMRSLYSGVSGLKNHQVRMDVIGNNISNVNTHGFKTERVTFQ 42


>gi|163845457|ref|YP_001623112.1| flagellar hook protein FlgE [Brucella suis ATCC 23445]
 gi|163676180|gb|ABY40290.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
          Length = 396

 Score = 54.5 bits (129), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 37/111 (33%), Gaps = 2/111 (1%)

Query: 25  ISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVA 84
           +  + A      +      YR    +       +       +   +S  V    P     
Sbjct: 286 VGNDGAVVAVYENGTQKVLYRIPLANVASPNRMTVVSGNIFLPSAESGDVRLGFPQGDGM 345

Query: 85  N--ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
               SG ++  N ++  E  DM E  R Y AN +  +   ++M   ++L R
Sbjct: 346 GKIMSGTLEESNADIAQELTDMIEAQRSYTANSKVFQTGSELMDVLVNLKR 396



 Score = 44.9 bits (104), Expect = 0.004,   Method: Composition-based stats.
 Identities = 17/90 (18%), Positives = 29/90 (32%), Gaps = 2/90 (2%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG- 60
            L        SG+  Q+ R+  +++NIANA   G       +    +      + SG  
Sbjct: 1  MSLYGMMRTGVSGMNAQANRLSTVADNIANASMVGYKRAETQFSSLVLPSTAGQYNSGSV 60

Query: 61 -VRVKKIGVDQSTFVEEFDPGHPVANASGI 89
             V+    DQ              + +G 
Sbjct: 61 LTDVRYGISDQGGIRSTSSTTDLAIDDNGY 90


>gi|327193059|gb|EGE59971.1| flagellar hook protein [Rhizobium etli CNPAF512]
          Length = 434

 Score = 54.5 bits (129), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 30/82 (36%)

Query: 52  EEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
            + +    G      G    T              SG ++  NV++  E  +M E  R Y
Sbjct: 353 PDKLTLMSGNVYSANGQSGVTVTGFPQTNGLGTIKSGALEGSNVDLAGELTEMIEAQRSY 412

Query: 112 MANLQTIKQSHDMMTTTLDLLR 133
            AN +  +   D+M   ++L R
Sbjct: 413 TANSKVFQTGSDIMDVLVNLKR 434



 Score = 48.7 bits (114), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/101 (24%), Positives = 41/101 (40%), Gaps = 4/101 (3%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             +  S   A SG+  Q+ R+  +S+NIAN  TTG    S  +    +      + SGGV
Sbjct: 1   MSIFGSMKTAVSGMNAQANRLSTVSDNIANVNTTGYKAVSTSFSSLVLPSSGGNYNSGGV 60

Query: 62  R--VKKIGVDQSTFVEEFDPGHPVANASGI--VKYPNVNVL 98
           +  V++   DQ              +  G   V+ P+   +
Sbjct: 61  QTSVRQAVSDQGDISYTTSTTDLAISGDGFFIVQGPDGTPV 101


>gi|203284204|ref|YP_002221944.1| flagellar hook protein [Borrelia duttonii Ly]
 gi|201083647|gb|ACH93238.1| flagellar hook protein [Borrelia duttonii Ly]
          Length = 441

 Score = 54.5 bits (129), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 22/43 (51%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           ++  NV++  +  DM  T R + AN +TI  S  ++   + L 
Sbjct: 398 LEMSNVDLAEQFTDMIVTQRGFQANAKTITTSDQLLQELVRLK 440



 Score = 37.9 bits (86), Expect = 0.42,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 20/42 (47%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S +   SGL     RM ++  NI+N  T G   G   ++
Sbjct: 1  MMRSLYSGVSGLQNHQTRMDVVGNNISNVNTVGFKKGRVNFQ 42


>gi|148380698|ref|YP_001255239.1| flagellar hook-associated protein FlgK [Clostridium botulinum A
          str. ATCC 3502]
 gi|153932743|ref|YP_001384982.1| flagellar hook-associated protein FlgK [Clostridium botulinum A
          str. ATCC 19397]
 gi|153935679|ref|YP_001388452.1| flagellar hook-associated protein FlgK [Clostridium botulinum A
          str. Hall]
 gi|226950152|ref|YP_002805243.1| flagellar hook-associated protein FlgK [Clostridium botulinum A2
          str. Kyoto]
 gi|148290182|emb|CAL84301.1| flagellar hook-associated protein 1 [Clostridium botulinum A str.
          ATCC 3502]
 gi|152928787|gb|ABS34287.1| flagellar hook-associated protein FlgK [Clostridium botulinum A
          str. ATCC 19397]
 gi|152931593|gb|ABS37092.1| flagellar hook-associated protein FlgK [Clostridium botulinum A
          str. Hall]
 gi|226841472|gb|ACO84138.1| flagellar hook-associated protein FlgK [Clostridium botulinum A2
          str. Kyoto]
          Length = 622

 Score = 54.5 bits (129), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 28/78 (35%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  L  + +I  SG+  Q   +   S NIANA T G +      +      +  M+ + G
Sbjct: 1  MSGLFGTLNIGKSGMFAQQGALNTTSHNIANANTEGYSRQRVELQTTRPYCKPSMNSAAG 60

Query: 61 VRVKKIGVDQSTFVEEFD 78
                GV         D
Sbjct: 61 PGQVGTGVQIVAINRVRD 78



 Score = 39.9 bits (91), Expect = 0.11,   Method: Composition-based stats.
 Identities = 15/105 (14%), Positives = 35/105 (33%), Gaps = 2/105 (1%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           N     +  G+        +    M+      +  +GVD++                   
Sbjct: 517 NPNDEFEFNGTTLNTIGKDTNGMTMNIYFNDIIGGLGVDEAEAQRMVKNQATSLAGFQQA 576

Query: 91  KYP--NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +     V++  E A++ + N  Y AN + I     ++   ++ L+
Sbjct: 577 RDSVSGVSMDEEFANLVQFNHCYQANAKIISTVDQLLDVVINGLK 621


>gi|288871078|ref|ZP_06116279.2| flagellar hook protein [Clostridium hathewayi DSM 13479]
 gi|288864882|gb|EFC97180.1| flagellar hook protein [Clostridium hathewayi DSM 13479]
          Length = 653

 Score = 54.5 bits (129), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 26/54 (48%)

Query: 80  GHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
               A  +  ++  NV++  E +DM  T R + AN + I  S  ++   ++L R
Sbjct: 600 DGTGALKTSSLEMSNVDISTEFSDMIVTQRGFQANSRIITVSDSILEELVNLKR 653


>gi|163852464|ref|YP_001640507.1| flagellar basal-body rod protein FlgG [Methylobacterium extorquens
           PA1]
 gi|218531220|ref|YP_002422036.1| flagellar basal-body rod protein FlgG [Methylobacterium
           chloromethanicum CM4]
 gi|240139801|ref|YP_002964278.1| flagellar biosynthesis; cell-distal portion of basal-body rod
           [Methylobacterium extorquens AM1]
 gi|254562216|ref|YP_003069311.1| cell-distal portion of basal-body rod biosynthesis protein
           [Methylobacterium extorquens DM4]
 gi|163664069|gb|ABY31436.1| flagellar basal-body rod protein FlgG [Methylobacterium extorquens
           PA1]
 gi|218523523|gb|ACK84108.1| flagellar basal-body rod protein FlgG [Methylobacterium
           chloromethanicum CM4]
 gi|240009775|gb|ACS41001.1| flagellar biosynthesis; cell-distal portion of basal-body rod
           [Methylobacterium extorquens AM1]
 gi|254269494|emb|CAX25460.1| flagellar biosynthesis; cell-distal portion of basal-body rod
           [Methylobacterium extorquens DM4]
          Length = 263

 Score = 54.5 bits (129), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 12/90 (13%), Positives = 28/90 (31%)

Query: 44  YRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETAD 103
           ++      +  +   G     +                        ++  NVN + E + 
Sbjct: 173 FQLARFVNKVGLESIGDNLFVETAASGPAITGLPGSEGFGNLQQRYLEEANVNAVTEISS 232

Query: 104 MRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +    R Y  N + +  +  M++TT  + R
Sbjct: 233 LIAAQRAYEMNSKVVTAADQMLSTTSQMFR 262



 Score = 34.8 bits (78), Expect = 4.0,   Method: Composition-based stats.
 Identities = 15/41 (36%), Positives = 24/41 (58%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          + + + A +G+A Q   +Q+IS NIAN RTTG       ++
Sbjct: 1  MRALYAAATGMAAQELNVQVISNNIANLRTTGYKRQQVHFQ 41


>gi|320353949|ref|YP_004195288.1| flagellar hook-basal body protein [Desulfobulbus propionicus DSM
           2032]
 gi|320122451|gb|ADW17997.1| flagellar hook-basal body protein [Desulfobulbus propionicus DSM
           2032]
          Length = 423

 Score = 54.5 bits (129), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 14/86 (16%), Positives = 33/86 (38%), Gaps = 1/86 (1%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
           T    + +   G    ++ G   +  +               ++  NV++  E  D+   
Sbjct: 339 TFINSDGLDAVGSSLYRETGESGTPTIGYPGASQGTLITQA-LELSNVDLATEFVDLITI 397

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
              Y AN + I  +++M+   ++L+R
Sbjct: 398 QNAYSANSKVITTTNEMLDELVNLIR 423


>gi|160939658|ref|ZP_02087006.1| hypothetical protein CLOBOL_04550 [Clostridium bolteae ATCC
           BAA-613]
 gi|158437449|gb|EDP15213.1| hypothetical protein CLOBOL_04550 [Clostridium bolteae ATCC
           BAA-613]
          Length = 550

 Score = 54.5 bits (129), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 19/86 (22%), Positives = 33/86 (38%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
           T      + G G    K         + +       A  +  ++  NV++  E ADM  T
Sbjct: 465 TFDNPYGLEGVGNSYFKTTANSGDPKLCQAGENGTGALKTSSLEMSNVDISTEFADMIVT 524

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R + AN + I  S  ++   ++L R
Sbjct: 525 QRGFQANSRIITVSDSILEELVNLKR 550



 Score = 34.5 bits (77), Expect = 5.4,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 21/58 (36%), Gaps = 4/58 (6%)

Query: 15 LAVQSARMQIISENIANARTTGDTPG----SDPYRRKTISFEEVMHGSGGVRVKKIGV 68
          +     ++ +I  NIAN  T G         D Y +   S     +  GG    ++G 
Sbjct: 1  MQAHQTKLDVIGNNIANVNTYGFKSSRARFQDVYYQTLQSATGGDNNKGGTNASQVGY 58


>gi|300870897|ref|YP_003785768.1| flagellar hook-basal body complex protein FlhO [Brachyspira
           pilosicoli 95/1000]
 gi|300688596|gb|ADK31267.1| flagellar hook-basal body complex protein, FlhO [Brachyspira
           pilosicoli 95/1000]
          Length = 282

 Score = 54.5 bits (129), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 19/42 (45%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            ++  NVN + E   M E  R Y  N +TI     ++   ++
Sbjct: 236 FLEMSNVNPINEMVRMIEVQRAYELNSKTISTHDTLIGRVVN 277



 Score = 47.2 bits (110), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 11/73 (15%), Positives = 25/73 (34%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++   +   SG+  +  R+ +++ N+AN    G    +  ++             G V  
Sbjct: 1  MVRGVYTGASGMIAEQYRLDVVANNLANVDKPGFKRDTATFKAFPEMMAARTEDDGVVIF 60

Query: 64 KKIGVDQSTFVEE 76
               D   +V  
Sbjct: 61 PLGSTDIRPYVGR 73


>gi|260574380|ref|ZP_05842384.1| protein of unknown function DUF1078 domain protein [Rhodobacter sp.
           SW2]
 gi|259023276|gb|EEW26568.1| protein of unknown function DUF1078 domain protein [Rhodobacter sp.
           SW2]
          Length = 435

 Score = 54.5 bits (129), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 22/43 (51%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +    +V  E  ++ +T R Y +N + I+   +M+  T ++ R
Sbjct: 393 EGSTTDVAAELTNLIQTQRAYSSNAKVIQTVDEMLQETTNIKR 435



 Score = 36.4 bits (82), Expect = 1.5,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 25/64 (39%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            + ++     +GL   + R+  IS+NIAN+ T G    S  +    I+           
Sbjct: 1  MTISSALSAGVAGLNANATRLASISDNIANSGTYGYKRASTDFESMVITQAAGAGTYSAG 60

Query: 62 RVKK 65
           V+ 
Sbjct: 61 GVRA 64


>gi|294852968|ref|ZP_06793640.1| flagellar hook protein FlgE [Brucella sp. NVSL 07-0026]
 gi|294818623|gb|EFG35623.1| flagellar hook protein FlgE [Brucella sp. NVSL 07-0026]
          Length = 396

 Score = 54.5 bits (129), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 37/111 (33%), Gaps = 2/111 (1%)

Query: 25  ISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVA 84
           +  + A      +      YR    +       +       +   +S  V    P     
Sbjct: 286 VGNDGAVVAVYENGTQKVLYRIPLANVASPDRMTVVSGNIFLPSAESGDVRLGFPQGDGM 345

Query: 85  N--ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
               SG ++  N ++  E  DM E  R Y AN +  +   ++M   ++L R
Sbjct: 346 GKIMSGTLEESNADIAQELTDMIEAQRSYTANSKVFQTDSELMDVLVNLKR 396



 Score = 44.5 bits (103), Expect = 0.004,   Method: Composition-based stats.
 Identities = 18/90 (20%), Positives = 30/90 (33%), Gaps = 2/90 (2%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG- 60
            L        SG+  Q+ R+  +++NIANA T G       +    +      + SG  
Sbjct: 1  MSLYGMMRTGVSGMNAQANRLSTVADNIANASTVGYKRAETQFSSLVLPSTAGQYNSGSV 60

Query: 61 -VRVKKIGVDQSTFVEEFDPGHPVANASGI 89
             V+    DQ              + +G 
Sbjct: 61 LTDVRYGISDQGGIRSTSSTTDLAIDGNGY 90


>gi|283850806|ref|ZP_06368092.1| flagellar basal-body rod protein FlgF [Desulfovibrio sp. FW1012B]
 gi|283573729|gb|EFC21703.1| flagellar basal-body rod protein FlgF [Desulfovibrio sp. FW1012B]
          Length = 260

 Score = 54.5 bits (129), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 30/64 (46%)

Query: 69  DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
           D +T  E    G     A G ++ PNV V+ E   M ET R + A  + +  S+++ T  
Sbjct: 194 DGATVQEGPAEGGTTQVAQGYLEKPNVEVVEEMVTMIETQRTFEAYQKVMTNSNELDTKA 253

Query: 129 LDLL 132
           + + 
Sbjct: 254 IRMG 257


>gi|150388209|ref|YP_001318258.1| flagellar basal body rod protein [Alkaliphilus metalliredigens
           QYMF]
 gi|149948071|gb|ABR46599.1| flagellar basal body rod protein [Alkaliphilus metalliredigens
           QYMF]
          Length = 363

 Score = 54.5 bits (129), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 25/48 (52%), Gaps = 1/48 (2%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL-DLLR 133
            G ++  N+N + E  +M  T R Y AN + ++   +++   + ++ +
Sbjct: 315 QGYLEESNINSIQEMVEMISTFRDYEANQKVVQAYDEILQKAVGEIGK 362



 Score = 40.2 bits (92), Expect = 0.10,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 17/40 (42%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDP 43
          +    + A SG+     ++ + S NIAN  TTG       
Sbjct: 1  MFRGLYTATSGMQTAQRKLDVTSNNIANINTTGFKKDVVA 40


>gi|33596140|ref|NP_883783.1| flagellar hook protein FlgE [Bordetella parapertussis 12822]
 gi|33573143|emb|CAE36790.1| flagellar hook protein FlgE [Bordetella parapertussis]
          Length = 473

 Score = 54.5 bits (129), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 23/42 (54%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           ++  NV++  E  +M    R Y AN QTIK   ++M   +++
Sbjct: 431 LEASNVDMSRELVNMIVAQRTYQANAQTIKTQDEVMQVLMNM 472



 Score = 33.7 bits (75), Expect = 7.7,   Method: Composition-based stats.
 Identities = 12/33 (36%), Positives = 17/33 (51%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          SGL   S  + +I  NIAN+ T G   G+  + 
Sbjct: 8  SGLNAASQNLDVIGNNIANSGTVGFKSGAASFA 40


>gi|83595982|gb|ABC25342.1| flagellar hook protein [uncultured marine bacterium Ant24C4]
          Length = 437

 Score = 54.5 bits (129), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 22/43 (51%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  + +V  E   + +T R Y +N + I+   +M+  T ++ R
Sbjct: 395 EESSTDVAGELTQLIQTQRAYSSNAKVIQTVDEMLQETTNIKR 437



 Score = 42.9 bits (99), Expect = 0.016,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 31/69 (44%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            + +S +   +GL+  + R+  IS+NIAN+ T G       ++   I      + +GGV
Sbjct: 1  MTISSSLNAGVAGLSANATRLATISDNIANSSTFGYKRAVTDFQSLVIENSNSKYTAGGV 60

Query: 62 RVKKIGVDQ 70
          R     +  
Sbjct: 61 RTTTTRLID 69


>gi|117919774|ref|YP_868966.1| flagellar basal body rod protein FlgG [Shewanella sp. ANA-3]
 gi|117612106|gb|ABK47560.1| flagellar basal-body rod protein FlgG [Shewanella sp. ANA-3]
          Length = 262

 Score = 54.5 bits (129), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 26/80 (32%)

Query: 46  RKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
                    +   G     + G   +            A   G ++  NVNV  E  ++ 
Sbjct: 176 MTDFINPSGLDPMGQNLYTETGASGTPIQGTASLDGMGAIRQGALETSNVNVTEELVNLI 235

Query: 106 ETNRLYMANLQTIKQSHDMM 125
           E+ R+Y  N + I     M+
Sbjct: 236 ESQRIYEMNSKVISAVDQML 255



 Score = 39.1 bits (89), Expect = 0.20,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  +  I+ +GL  Q   + +IS N+ANA T G       +
Sbjct: 1  MHPALWISKTGLDAQQTDIAVISNNVANASTVGYKKSRAVF 41


>gi|117926844|ref|YP_867461.1| hypothetical protein Mmc1_3570 [Magnetococcus sp. MC-1]
 gi|117610600|gb|ABK46055.1| protein of unknown function DUF1078 domain protein [Magnetococcus
           sp. MC-1]
          Length = 496

 Score = 54.5 bits (129), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 32/85 (37%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
              E+ +   G     +  +       E + G      S  ++  NV++  E  +M  T 
Sbjct: 412 FDNEQALDQVGANLFAETHLSGVPREGEPNSGALGTIRSYTLENSNVDMSNEMVNMITTQ 471

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R + AN + I  +  M+   + L R
Sbjct: 472 RAFQANSRLITVTDGMLEELIALKR 496


>gi|269103188|ref|ZP_06155885.1| flagellar basal-body rod protein FlgG [Photobacterium damselae
           subsp. damselae CIP 102761]
 gi|268163086|gb|EEZ41582.1| flagellar basal-body rod protein FlgG [Photobacterium damselae
           subsp. damselae CIP 102761]
          Length = 262

 Score = 54.5 bits (129), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
              +++  NVNV  E  +M E  R+Y  N + I     M++
Sbjct: 216 RQSMLETSNVNVTEELVNMIEAQRVYEMNSKVISTVDQMLS 256



 Score = 41.8 bits (96), Expect = 0.030,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  +  ++ +GL  Q   +  IS N+ANA T G   G   +
Sbjct: 1  MHPALWVSKTGLDAQQTNISTISNNLANASTVGFKKGRAVF 41


>gi|298530010|ref|ZP_07017412.1| fagellar hook-basal body protein [Desulfonatronospira thiodismutans
           ASO3-1]
 gi|298509384|gb|EFI33288.1| fagellar hook-basal body protein [Desulfonatronospira thiodismutans
           ASO3-1]
          Length = 755

 Score = 54.5 bits (129), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 14/85 (16%), Positives = 32/85 (37%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
              E+ +   GG    +                    +S  ++  NV++  E   + +T 
Sbjct: 671 FHNEQGLRKEGGNLFSETRSSGPAMTGLAGTRGLGEISSNSLEMSNVDLATEFVKLIQTE 730

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           + + AN +TI+ +  M+   + + R
Sbjct: 731 KGFQANSKTIQTTDTMLGIIMQMKR 755



 Score = 34.1 bits (76), Expect = 7.4,   Method: Composition-based stats.
 Identities = 12/35 (34%), Positives = 16/35 (45%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTG 36
            L +S +   SGL     +M  I  NI+N  T G
Sbjct: 1  MGLSSSMYTGVSGLKGHGEKMGTIGNNISNVSTVG 35


>gi|126730134|ref|ZP_01745946.1| flagellar basal-body rod protein FlgG [Sagittula stellata E-37]
 gi|126709514|gb|EBA08568.1| flagellar basal-body rod protein FlgG [Sagittula stellata E-37]
          Length = 261

 Score = 54.5 bits (129), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 12/76 (15%), Positives = 23/76 (30%)

Query: 55  MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
           +   G     +                      G ++  +V+ + E  D+ E  R Y  N
Sbjct: 184 LEAIGSNLFVETEASGPAIQSTPGQDGLGTLRQGYLEDSSVDAVKEITDLIEAQRGYELN 243

Query: 115 LQTIKQSHDMMTTTLD 130
            + I  +  M+  T  
Sbjct: 244 SKVISAADQMLGATAQ 259



 Score = 42.6 bits (98), Expect = 0.019,   Method: Composition-based stats.
 Identities = 12/49 (24%), Positives = 23/49 (46%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE 53
          + +  IA +G++ Q  R+++IS N++N  TTG       +         
Sbjct: 1  MRALKIAATGMSAQQMRVEVISNNLSNMSTTGYNARRAEFADLHYQQMA 49


>gi|188582486|ref|YP_001925931.1| flagellar basal-body rod protein FlgG [Methylobacterium populi
           BJ001]
 gi|179345984|gb|ACB81396.1| flagellar basal-body rod protein FlgG [Methylobacterium populi
           BJ001]
          Length = 263

 Score = 54.5 bits (129), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 12/90 (13%), Positives = 28/90 (31%)

Query: 44  YRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETAD 103
           ++      +  +   G     +                        ++  NVN + E + 
Sbjct: 173 FQLARFVNKVGLESIGDNLFVETAASGPAITGLPGSEGFGNLQQNWLEEANVNAVTEISS 232

Query: 104 MRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +    R Y  N + +  +  M++TT  + R
Sbjct: 233 LIAAQRAYEMNSKVVTAADQMLSTTSQMFR 262



 Score = 35.6 bits (80), Expect = 2.2,   Method: Composition-based stats.
 Identities = 15/41 (36%), Positives = 24/41 (58%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          + + + A +G+A Q   +Q+IS NIAN RTTG       ++
Sbjct: 1  MRALYAAATGMAAQELNVQVISNNIANLRTTGYKRQQVHFQ 41


>gi|260772276|ref|ZP_05881192.1| flagellar basal-body rod protein FlgG [Vibrio metschnikovii CIP
           69.14]
 gi|260611415|gb|EEX36618.1| flagellar basal-body rod protein FlgG [Vibrio metschnikovii CIP
           69.14]
          Length = 189

 Score = 54.5 bits (129), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 23/72 (31%)

Query: 55  MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
           +   G       G                     +++  NVNV  E  +M E  R+Y  N
Sbjct: 112 LEPVGQNLYLPTGASGDPQEGVPGLDGLGNIRQSMLESSNVNVTEELVNMIEAQRVYEMN 171

Query: 115 LQTIKQSHDMMT 126
            + I     MM+
Sbjct: 172 SKVISSVDQMMS 183


>gi|113969608|ref|YP_733401.1| flagellar basal body rod protein FlgG [Shewanella sp. MR-4]
 gi|113884292|gb|ABI38344.1| flagellar basal-body rod protein FlgG [Shewanella sp. MR-4]
          Length = 262

 Score = 54.5 bits (129), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 26/77 (33%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +   G     + G   +            A   G ++  NVNV  E  ++ E+ 
Sbjct: 179 FINPSGLDPMGQNLYTETGASGTPIQGTASLDGMGAIRQGALETSNVNVTEELVNLIESQ 238

Query: 109 RLYMANLQTIKQSHDMM 125
           R+Y  N + I     M+
Sbjct: 239 RIYEMNSKVISAVDQML 255



 Score = 39.1 bits (89), Expect = 0.19,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  +  I+ +GL  Q   + +IS N+ANA T G       +
Sbjct: 1  MHPALWISKTGLDAQQTDIAVISNNVANASTVGYKKSRAVF 41


>gi|218509412|ref|ZP_03507290.1| flagellar hook protein FlgE [Rhizobium etli Brasil 5]
          Length = 196

 Score = 54.5 bits (129), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 30/82 (36%)

Query: 52  EEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
            + +    G      G    T              SG ++  NV++  E  +M E  R Y
Sbjct: 115 PDKLTLMSGNVYSANGQSGVTVTGFPQTNGLGTIKSGALEGSNVDLAGELTEMIEAQRSY 174

Query: 112 MANLQTIKQSHDMMTTTLDLLR 133
            AN +  +   D+M   ++L R
Sbjct: 175 TANSKVFQTGSDIMDVLVNLKR 196


>gi|332525066|ref|ZP_08401246.1| flagellar basal body and hook protein [Rubrivivax benzoatilyticus
           JA2]
 gi|332108355|gb|EGJ09579.1| flagellar basal body and hook protein [Rubrivivax benzoatilyticus
           JA2]
          Length = 432

 Score = 54.5 bits (129), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 18/83 (21%), Positives = 33/83 (39%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
               + +   GG             V     G+     +G ++  N+++  E  +M    
Sbjct: 349 FRNPQGLQPLGGNVWASTYASGDAVVGVPSEGNMGVIQAGALEESNIDLTGELVNMITAQ 408

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R+Y AN QTIK    +M T +++
Sbjct: 409 RIYQANAQTIKTQDQVMQTLVNM 431



 Score = 35.2 bits (79), Expect = 2.7,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 28/83 (33%), Gaps = 4/83 (4%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          S     SGL   S  + +I  NIANA T G       +               GV    I
Sbjct: 2  SFQQGLSGLNATSKSLDVIGNNIANANTYGAKVSRAEF----SDMYATALNGAGVNNVGI 57

Query: 67 GVDQSTFVEEFDPGHPVANASGI 89
          GV      ++F  G+     + +
Sbjct: 58 GVTLGAVSQQFTQGNISTTGNAM 80


>gi|268680907|ref|YP_003305338.1| flagellar hook protein FlgE [Sulfurospirillum deleyianum DSM 6946]
 gi|268618938|gb|ACZ13303.1| flagellar hook protein FlgE [Sulfurospirillum deleyianum DSM 6946]
          Length = 851

 Score = 54.5 bits (129), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 41/120 (34%), Gaps = 6/120 (5%)

Query: 13  SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQST 72
           SGL+V       I  +  N R+             T +    +   GG    +       
Sbjct: 738 SGLSVDET--GTIIGSFTNGRSFALAQ----VAMSTFTNNGGLESDGGNCYIQTSNSGDP 791

Query: 73  FVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
              +   G   +  S  ++  NV++      +    R Y AN +TI  + +M+ T L L 
Sbjct: 792 VFGQAGTGGKGSVQSSSLEMSNVDLSRSLTQLIVIQRGYQANSKTITTADEMLNTLLQLK 851



 Score = 37.5 bits (85), Expect = 0.68,   Method: Composition-based stats.
 Identities = 12/58 (20%), Positives = 19/58 (32%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
          ++ +     +GL      M + S NIAN  TTG       +         +     G 
Sbjct: 1  MMRALWAGVTGLQAHQIAMDVESNNIANVNTTGYKYSRANFSNLLSQTVSIATAPQGE 58


>gi|300870390|ref|YP_003785261.1| flagellar hook protein FlgE [Brachyspira pilosicoli 95/1000]
 gi|300688089|gb|ADK30760.1| flagellar hook protein, FlgE [Brachyspira pilosicoli 95/1000]
          Length = 441

 Score = 54.5 bits (129), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 32/79 (40%)

Query: 55  MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
           +  +G     +     +  +         +  +G ++  NV++  +  DM  T R + AN
Sbjct: 363 LEKAGDTLFVESNNSGAANIGVAAAEGRGSIKAGTLEMSNVDLSEQFTDMIVTQRGFQAN 422

Query: 115 LQTIKQSHDMMTTTLDLLR 133
            +TI  +  ++   + L R
Sbjct: 423 ARTITTADQLLQEVIALKR 441



 Score = 37.5 bits (85), Expect = 0.58,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 19/42 (45%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S     SGL     RM ++  NI+N  T G   G   ++
Sbjct: 1  MMRSLFAGVSGLQNHQTRMDVVGNNISNVNTYGFKKGRVTFK 42


>gi|261211320|ref|ZP_05925608.1| flagellar basal-body rod protein FlgG [Vibrio sp. RC341]
 gi|260839275|gb|EEX65901.1| flagellar basal-body rod protein FlgG [Vibrio sp. RC341]
          Length = 262

 Score = 54.5 bits (129), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 23/72 (31%)

Query: 55  MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
           +   G       G                     +++  NVNV  E  +M E  R+Y  N
Sbjct: 185 LEPIGQNLYLPTGASGEPQEGVPGLDGLGDVRQSMLETSNVNVTEELVNMIEAQRVYEMN 244

Query: 115 LQTIKQSHDMMT 126
            + I     MM+
Sbjct: 245 SKVISAVDKMMS 256



 Score = 41.4 bits (95), Expect = 0.047,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  +  ++ +GL  Q   +  IS N+ANA T G   G   +
Sbjct: 1  MQPALWVSKTGLDAQQTNITTISNNLANASTIGFKKGRAVF 41


>gi|322807049|emb|CBZ04623.1| flagellar hook-associated protein FlgK [Clostridium botulinum
          H04402 065]
          Length = 630

 Score = 54.5 bits (129), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 28/78 (35%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  L  + +I  SG+  Q   +   S NIANA T G +      +      +  M+ + G
Sbjct: 1  MSGLFGTLNIGKSGMFAQQGAINTTSHNIANANTEGYSRQRVELQTTRPYCKPSMNSAAG 60

Query: 61 VRVKKIGVDQSTFVEEFD 78
                GV         D
Sbjct: 61 PGQVGTGVQIVAINRVRD 78



 Score = 38.7 bits (88), Expect = 0.27,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 20/41 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             V++  E A++ + N  Y AN + I     ++   ++ L+
Sbjct: 589 SGVSLDEEFANLVQFNHCYQANAKIISTVDQLLDVVINGLK 629


>gi|223038348|ref|ZP_03608642.1| flagellar hook protein FlgE [Campylobacter rectus RM3267]
 gi|222880205|gb|EEF15292.1| flagellar hook protein FlgE [Campylobacter rectus RM3267]
          Length = 784

 Score = 54.5 bits (129), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 30/85 (35%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
             S  E +   GG    +        +           +S  ++  NV++      +   
Sbjct: 700 KFSNNEGLSSEGGNLFSRTANSGDPVIGAAQTAGRGKISSSSLEMSNVDLSRSLTQLIVV 759

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLL 132
            R + AN +TI  S +M+ T L L 
Sbjct: 760 QRGFQANSKTITTSDEMLNTLLQLK 784



 Score = 34.8 bits (78), Expect = 4.0,   Method: Composition-based stats.
 Identities = 10/33 (30%), Positives = 14/33 (42%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ S     +GL      M +   NIAN  T G
Sbjct: 1  MMRSLWAGVTGLQAHQIAMDVEGNNIANVNTVG 33


>gi|182680548|ref|YP_001834694.1| flagellar basal body rod protein FlgG [Beijerinckia indica subsp.
           indica ATCC 9039]
 gi|182636431|gb|ACB97205.1| flagellar basal-body rod protein FlgG [Beijerinckia indica subsp.
           indica ATCC 9039]
          Length = 262

 Score = 54.5 bits (129), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 14/95 (14%), Positives = 28/95 (29%)

Query: 33  RTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKY 92
                            + E  +   G    ++     +                G ++ 
Sbjct: 162 NGQTSAQQIGQLTLTNFANEAGLTPLGSNLYRQTEASGTPVSGTPGDIGFATINQGYLET 221

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
            NV+ + E  D+    R Y  N + I+ + +M TT
Sbjct: 222 SNVDPVKEITDLISAQRAYEMNSKVIQAADEMATT 256



 Score = 39.1 bits (89), Expect = 0.22,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 21/40 (52%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          + +  IA +G+A Q   +Q+I+ NIAN  TT        +
Sbjct: 1  MKALSIAATGMAAQDLNVQVIANNIANMNTTAFKRARAEF 40


>gi|222147571|ref|YP_002548528.1| flagellar basal-body rod protein [Agrobacterium vitis S4]
 gi|221734559|gb|ACM35522.1| flagellar basal-body rod protein [Agrobacterium vitis S4]
          Length = 263

 Score = 54.5 bits (129), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 10/78 (12%), Positives = 22/78 (28%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +   G    ++     +                G ++  NV+ + E   +    
Sbjct: 179 FVNPAGLKAIGDNLFQETASSGNPINGVPGDAGYGYLKQGYLESSNVDSVTEITSLISAQ 238

Query: 109 RLYMANLQTIKQSHDMMT 126
           R Y  N + I  + +M  
Sbjct: 239 RAYEMNSKVITTADEMAQ 256



 Score = 42.2 bits (97), Expect = 0.025,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 22/40 (55%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          + +  IA++G+  Q   +++IS NIAN  TTG       +
Sbjct: 1  MRALAIASTGMNAQQTNLEVISNNIANINTTGFKKSRAEF 40


>gi|145298493|ref|YP_001141334.1| flagellar basal body rod protein FlgG [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|142851265|gb|ABO89586.1| flagellar basal body rod protein FlgG [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 262

 Score = 54.5 bits (129), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 15/115 (13%), Positives = 33/115 (28%)

Query: 16  AVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVE 75
             QS  +    +     +  G +                +   G     +     +    
Sbjct: 146 NAQSVTVSTDGQVSIQLKGDGASQVVGQINLSDFVNASGLQPMGENMFLETQSSGAPIGG 205

Query: 76  EFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
                       G+++  NVNV  E  ++ +  R+Y  N + +     MM+  + 
Sbjct: 206 VAGADGLGVIKQGMLETSNVNVTEELVNLIQAQRVYEMNSKVLSAVDGMMSFLIQ 260



 Score = 44.1 bits (102), Expect = 0.007,   Method: Composition-based stats.
 Identities = 19/108 (17%), Positives = 35/108 (32%), Gaps = 6/108 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +  +  I+ +GL  Q   + + S N+ANA T G        + + I  + +         
Sbjct: 1   MNPALWISKTGLDAQQTNISVTSNNLANASTVG------YKKSRAIFEDLLYQNINQPGG 54

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
           +     +         G  V          NV     + D+  + R Y
Sbjct: 55  RSSADTELPSGLMLGAGAKVVATQKNHGQGNVQTTDNSLDLMISGRGY 102


>gi|146305252|ref|YP_001185717.1| flagellar basal-body rod protein FlgG [Pseudomonas mendocina ymp]
 gi|145573453|gb|ABP82985.1| flagellar basal-body rod protein FlgG [Pseudomonas mendocina ymp]
          Length = 261

 Score = 54.5 bits (129), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 20/116 (17%), Positives = 38/116 (32%), Gaps = 2/116 (1%)

Query: 17  VQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV--MHGSGGVRVKKIGVDQSTFV 74
             S+R  + S+ I  A   G+T   +  +    +F     +   GG   ++         
Sbjct: 144 AGSSRFTVGSDGIVTAVMAGETLPVELGQITLANFANPGGLEALGGNLYRETVASGEPVE 203

Query: 75  EEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
                        G+++  NV V+    +M    R Y AN + +  +  M      
Sbjct: 204 GTPGEDGLGNLKQGVLEGSNVQVVEAMVNMIAIQRAYEANAKVLDAASGMQQFLNQ 259



 Score = 41.0 bits (94), Expect = 0.057,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 21/41 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          + ++  ++ +GLA Q   M  ++ N+AN  TTG       +
Sbjct: 1  MSSALWVSKTGLAAQDKAMSAVANNLANVNTTGFKSDRVVF 41


>gi|2832235|gb|AAC01569.1| flagellar hook [Brucella abortus]
          Length = 396

 Score = 54.5 bits (129), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 37/111 (33%), Gaps = 2/111 (1%)

Query: 25  ISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVA 84
           +  + A      +      YR    +       +       +   +S  V    P     
Sbjct: 286 VGNDGAVVAVYENGTQKVLYRIPLANVASPDRMTVVSGNIFLPSAESGDVRLGFPQGDGM 345

Query: 85  N--ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
               SG ++  N ++  E  DM E  R Y AN +  +   ++M   ++L R
Sbjct: 346 GKIMSGTLEESNADIAQELTDMIEAQRSYTANSKVFQTGFELMDVLVNLKR 396



 Score = 45.2 bits (105), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/90 (20%), Positives = 30/90 (33%), Gaps = 2/90 (2%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG- 60
            L        SG+  Q+ R+  +++NIANA T G       +    +      + SG  
Sbjct: 1  MSLYGMMRTGVSGMNAQANRLSTVADNIANASTVGYKRAETQFSSLVLPSTAGQYNSGSV 60

Query: 61 -VRVKKIGVDQSTFVEEFDPGHPVANASGI 89
             V+    DQ              + +G 
Sbjct: 61 LTDVRYGISDQGGIRSTSSTTDLAIDGNGY 90


>gi|120598234|ref|YP_962808.1| flagellar basal body rod protein FlgG [Shewanella sp. W3-18-1]
 gi|120558327|gb|ABM24254.1| flagellar basal-body rod protein FlgG [Shewanella sp. W3-18-1]
          Length = 262

 Score = 54.5 bits (129), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 26/80 (32%)

Query: 46  RKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
                    +   G     + G   +            A   G ++  NVNV  E  ++ 
Sbjct: 176 MTDFINPSGLDPMGQNLYTETGASGTPIQGTASLDGMGAIRQGALETSNVNVTEELVNLI 235

Query: 106 ETNRLYMANLQTIKQSHDMM 125
           E+ R+Y  N + I     M+
Sbjct: 236 ESQRIYEMNSKVISAVDQML 255



 Score = 39.1 bits (89), Expect = 0.22,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  +  I+ +GL  Q   + +IS N+ANA T G       +
Sbjct: 1  MHPALWISKTGLDAQQTDIAVISNNVANASTVGYKKSRAVF 41


>gi|114046840|ref|YP_737390.1| flagellar basal body rod protein FlgG [Shewanella sp. MR-7]
 gi|113888282|gb|ABI42333.1| flagellar basal-body rod protein FlgG [Shewanella sp. MR-7]
          Length = 262

 Score = 54.5 bits (129), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 26/77 (33%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +   G     + G   +            A   G ++  NVNV  E  ++ E+ 
Sbjct: 179 FINPSGLDPMGQNLYTETGASGTPIQGTASLDGMGAIRQGALETSNVNVTEELVNLIESQ 238

Query: 109 RLYMANLQTIKQSHDMM 125
           R+Y  N + I     M+
Sbjct: 239 RIYEMNSKVISAVDQML 255



 Score = 39.1 bits (89), Expect = 0.20,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  +  I+ +GL  Q   + +IS N+ANA T G       +
Sbjct: 1  MHPALWISKTGLDAQQTDIAVISNNVANASTVGYKKSRAVF 41


>gi|238924161|ref|YP_002937677.1| flagellar hook protein [Eubacterium rectale ATCC 33656]
 gi|238875836|gb|ACR75543.1| flagellar hook protein [Eubacterium rectale ATCC 33656]
          Length = 477

 Score = 54.5 bits (129), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 23/44 (52%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  NV++  +  DM  T R + AN + I  S  ++   ++L R
Sbjct: 434 LEMSNVDLSSQFTDMIVTQRGFQANSRVITTSDTLLEELINLKR 477



 Score = 40.2 bits (92), Expect = 0.082,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 19/41 (46%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          ++ S + A SGL     RM +I  NIAN  T      S  +
Sbjct: 1  MMRSLYSAVSGLKTHQTRMDVIGNNIANVNTEAFKASSVRF 41


>gi|187478185|ref|YP_786209.1| flagellar hook protein [Bordetella avium 197N]
 gi|115422771|emb|CAJ49299.1| flagellar hook protein [Bordetella avium 197N]
          Length = 406

 Score = 54.5 bits (129), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 22/42 (52%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           ++  NV +  E  +M    R Y AN QTIK   +++   +++
Sbjct: 364 LEQSNVEMSQELVNMIVAQRTYQANAQTIKTQDEVLQVLINM 405


>gi|222053611|ref|YP_002535973.1| protein of unknown function DUF1078 domain protein [Geobacter sp.
           FRC-32]
 gi|221562900|gb|ACM18872.1| protein of unknown function DUF1078 domain protein [Geobacter sp.
           FRC-32]
          Length = 293

 Score = 54.5 bits (129), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 14/44 (31%), Positives = 23/44 (52%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  NV++  +   M  T R Y AN +TI  + +M    L+L R
Sbjct: 250 LEQSNVDLASQFVKMIITQRAYSANSKTITTADEMTQEVLNLKR 293


>gi|146293688|ref|YP_001184112.1| flagellar basal body rod protein FlgG [Shewanella putrefaciens
           CN-32]
 gi|145565378|gb|ABP76313.1| flagellar basal-body rod protein FlgG [Shewanella putrefaciens
           CN-32]
 gi|319427087|gb|ADV55161.1| flagellar basal-body rod protein FlgG [Shewanella putrefaciens 200]
          Length = 262

 Score = 54.5 bits (129), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 26/80 (32%)

Query: 46  RKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
                    +   G     + G   +            A   G ++  NVNV  E  ++ 
Sbjct: 176 MTDFINPSGLDPMGQNLYTETGASGTPIQGTASLDGMGAIRQGALETSNVNVTEELVNLI 235

Query: 106 ETNRLYMANLQTIKQSHDMM 125
           E+ R+Y  N + I     M+
Sbjct: 236 ESQRIYEMNSKVISAVDQML 255



 Score = 39.1 bits (89), Expect = 0.22,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  +  I+ +GL  Q   + +IS N+ANA T G       +
Sbjct: 1  MHPALWISKTGLDAQQTDIAVISNNVANASTVGYKKSRAVF 41


>gi|320536024|ref|ZP_08036083.1| putative flagellar basal-body rod protein FlgF [Treponema
           phagedenis F0421]
 gi|320147123|gb|EFW38680.1| putative flagellar basal-body rod protein FlgF [Treponema
           phagedenis F0421]
          Length = 271

 Score = 54.1 bits (128), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 24/89 (26%), Positives = 33/89 (37%), Gaps = 12/89 (13%)

Query: 40  GSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
            +D Y +K  S   +     G  +   G D                  G ++  NVNV+ 
Sbjct: 187 ENDRYLQKKGSSFYLDTPVSGPAIAAEGPD------------RPVTVQGFIEASNVNVVN 234

Query: 100 ETADMRETNRLYMANLQTIKQSHDMMTTT 128
           E   M E NR Y AN +TI+    MM   
Sbjct: 235 EMVRMIEVNRAYEANQKTIQSEDTMMAKL 263



 Score = 43.3 bits (100), Expect = 0.010,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 19/39 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSD 42
          +I   + A SG+  Q  ++ +IS N+AN  TT       
Sbjct: 1  MIRGWYTAASGMNAQQQQLDVISNNLANVDTTSYKRDVT 39


>gi|326791535|ref|YP_004309356.1| flagellar hook-basal body protein [Clostridium lentocellum DSM
           5427]
 gi|326542299|gb|ADZ84158.1| flagellar hook-basal body protein [Clostridium lentocellum DSM
           5427]
          Length = 432

 Score = 54.1 bits (128), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 14/44 (31%), Positives = 23/44 (52%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  NV++  E  DM  T R + AN + I  S +M+    +L R
Sbjct: 389 LEMSNVDLSSEFTDMIVTQRGFQANSRIISVSDEMLQELTNLKR 432



 Score = 41.4 bits (95), Expect = 0.037,   Method: Composition-based stats.
 Identities = 15/41 (36%), Positives = 19/41 (46%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          ++ S   A SGL V   RM +I  NIAN  T G       +
Sbjct: 1  MMRSMFSAVSGLRVHQTRMDVIGNNIANVNTIGYKSQRVTF 41


>gi|258621051|ref|ZP_05716085.1| flagellar basal-body rod protein FlgG [Vibrio mimicus VM573]
 gi|258625279|ref|ZP_05720187.1| flagellar basal-body rod protein FlgG [Vibrio mimicus VM603]
 gi|262166280|ref|ZP_06034017.1| flagellar basal-body rod protein FlgG [Vibrio mimicus VM223]
 gi|262170827|ref|ZP_06038505.1| flagellar basal-body rod protein FlgG [Vibrio mimicus MB-451]
 gi|258582452|gb|EEW07293.1| flagellar basal-body rod protein FlgG [Vibrio mimicus VM603]
 gi|258586439|gb|EEW11154.1| flagellar basal-body rod protein FlgG [Vibrio mimicus VM573]
 gi|261891903|gb|EEY37889.1| flagellar basal-body rod protein FlgG [Vibrio mimicus MB-451]
 gi|262025996|gb|EEY44664.1| flagellar basal-body rod protein FlgG [Vibrio mimicus VM223]
          Length = 262

 Score = 54.1 bits (128), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 23/72 (31%)

Query: 55  MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
           +   G       G                     +++  NVNV  E  +M E  R+Y  N
Sbjct: 185 LEPIGQNLYLPTGASGEPQEGVPGLDGLGDVRQSMLETSNVNVTEELVNMIEAQRVYEMN 244

Query: 115 LQTIKQSHDMMT 126
            + I     MM+
Sbjct: 245 SKVISAVDKMMS 256



 Score = 41.0 bits (94), Expect = 0.052,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  +  ++ +GL  Q   +  IS N+ANA T G   G   +
Sbjct: 1  MQPALWVSKTGLDAQQTNIATISNNLANASTVGFKKGRAVF 41


>gi|332187904|ref|ZP_08389637.1| flagellar basal-body rod protein FlgG [Sphingomonas sp. S17]
 gi|332012065|gb|EGI54137.1| flagellar basal-body rod protein FlgG [Sphingomonas sp. S17]
          Length = 262

 Score = 54.1 bits (128), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 19/114 (16%), Positives = 35/114 (30%)

Query: 17  VQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEE 76
                +       A  +           +  T      +   G   + +     +  +  
Sbjct: 147 ATQITIGTDGTVSATIQGQTAPAEIGQIQIATFPNPAGLQSKGDNYLTETAASGAVNMGV 206

Query: 77  FDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
                      G+++  NVNV+ E  DM ET R Y  N + IK + +M+     
Sbjct: 207 AGLEGRGQIRQGMLEGSNVNVVEELVDMIETQRAYEVNSKMIKSTDEMLQYANQ 260



 Score = 41.0 bits (94), Expect = 0.049,   Method: Composition-based stats.
 Identities = 17/40 (42%), Positives = 23/40 (57%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
           A+ HIA +GL  Q  RM++IS N+AN  TTG       +
Sbjct: 3  SAAMHIARTGLDAQDMRMRVISNNLANVNTTGFKRDRAAF 42


>gi|291524892|emb|CBK90479.1| fagellar hook-basal body proteins [Eubacterium rectale DSM 17629]
          Length = 477

 Score = 54.1 bits (128), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 23/44 (52%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  NV++  +  DM  T R + AN + I  S  ++   ++L R
Sbjct: 434 LEMSNVDLSSQFTDMIVTQRGFQANSRVITTSDTLLEELINLKR 477



 Score = 40.2 bits (92), Expect = 0.084,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 19/41 (46%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          ++ S + A SGL     RM +I  NIAN  T      S  +
Sbjct: 1  MMRSLYSAVSGLKTHQTRMDVIGNNIANVNTEAFKASSVRF 41


>gi|255323568|ref|ZP_05364698.1| flagellar hook protein [Campylobacter showae RM3277]
 gi|255299282|gb|EET78569.1| flagellar hook protein [Campylobacter showae RM3277]
          Length = 543

 Score = 54.1 bits (128), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 27/47 (57%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           S +++  NV++     ++  T + Y AN ++I  S++M+   ++L R
Sbjct: 497 SSMLEQSNVDLAQALTEVIVTQKAYDANAKSITTSNEMLQRAIELKR 543


>gi|260466619|ref|ZP_05812807.1| flagellar basal-body rod protein FlgG [Mesorhizobium opportunistum
           WSM2075]
 gi|259029625|gb|EEW30913.1| flagellar basal-body rod protein FlgG [Mesorhizobium opportunistum
           WSM2075]
          Length = 262

 Score = 54.1 bits (128), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 17/122 (13%), Positives = 38/122 (31%), Gaps = 3/122 (2%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           I + ++    + V    +    +  A      D       +    + E  +   G    +
Sbjct: 137 IPAINVPVDAVEV---IVNKTGQVFARIDGQTDLQNLGQLQIANFANEAGLAPLGDNLFQ 193

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           +        V             G ++  NV+ + E  ++    R Y  N + I+ + DM
Sbjct: 194 ETTASGPANVGVPGDPGFATIQQGYLEASNVDPVKEITELISAQRAYEMNSKVIQAADDM 253

Query: 125 MT 126
            +
Sbjct: 254 AS 255



 Score = 44.1 bits (102), Expect = 0.006,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 24/67 (35%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          + +  IA +G+  Q   +++I+ NIAN  TTG       +       +            
Sbjct: 1  MKALAIAATGMNAQQTNLEVIANNIANINTTGYKRARAEFSDLLYQVDRTQGVPNRSNAS 60

Query: 65 KIGVDQS 71
           +    S
Sbjct: 61 LVPEGVS 67


>gi|114765247|ref|ZP_01444379.1| putative flagellar hook protein [Pelagibaca bermudensis HTCC2601]
 gi|114542382|gb|EAU45410.1| putative flagellar hook protein [Roseovarius sp. HTCC2601]
          Length = 433

 Score = 54.1 bits (128), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 24/44 (54%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           V+  NV++  E   + +  R Y +N + I  + +M+  T++L R
Sbjct: 390 VESANVDIAEELTSLIQRQRAYSSNAKIITTADEMLNETVNLKR 433


>gi|56551505|ref|YP_162344.1| flagellar basal body rod protein FlgG [Zymomonas mobilis subsp.
           mobilis ZM4]
 gi|241761149|ref|ZP_04759238.1| flagellar basal-body rod protein FlgG [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
 gi|260752888|ref|YP_003225781.1| flagellar basal body rod protein FlgG [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
 gi|4378856|gb|AAD19724.1| flagellar basal-body rod protein [Zymomonas mobilis subsp. mobilis
           ZM4]
 gi|56543079|gb|AAV89233.1| flagellar basal-body rod protein FlgG [Zymomonas mobilis subsp.
           mobilis ZM4]
 gi|241374768|gb|EER64229.1| flagellar basal-body rod protein FlgG [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
 gi|258552251|gb|ACV75197.1| flagellar basal-body rod protein FlgG [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
          Length = 263

 Score = 54.1 bits (128), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 20/124 (16%), Positives = 41/124 (33%), Gaps = 3/124 (2%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            LI + +I  +   +       +S  +   +    +      +         +  +G   
Sbjct: 136 PLIPNINIPQNAEQITIGEDGTVSVQL---QGQTQSNQVGQIQTVRFINPAGLQATGQNL 192

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
             +        +             G ++  NVN++ E  DM ET R Y  N + +K S 
Sbjct: 193 YIETQSSGQPQIGLPQQDGMGYILQGELEQSNVNIVQELVDMIETQRAYEVNSKMVKASD 252

Query: 123 DMMT 126
           +M+ 
Sbjct: 253 EMLQ 256



 Score = 41.4 bits (95), Expect = 0.046,   Method: Composition-based stats.
 Identities = 16/87 (18%), Positives = 24/87 (27%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
            +A +GL  Q+ RM+II+ N+AN  TT        +       E               
Sbjct: 6  LQVARTGLDAQNTRMRIIANNLANVNTTAFKRDRAAFETLAYQAERQPGAQSTNSYYYAT 65

Query: 68 VDQSTFVEEFDPGHPVANASGIVKYPN 94
                  +             V   N
Sbjct: 66 GLTLGSGVQTIATERQETQGSFVNTGN 92


>gi|190890382|ref|YP_001976924.1| flagellar hook protein [Rhizobium etli CIAT 652]
 gi|190695661|gb|ACE89746.1| flagellar hook protein [Rhizobium etli CIAT 652]
          Length = 433

 Score = 54.1 bits (128), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 30/82 (36%)

Query: 52  EEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
            + +    G      G    T              SG ++  NV++  E  +M E  R Y
Sbjct: 352 PDKLTLMSGNVYSANGQSGVTVTGFPQTNGLGTIKSGALEGSNVDLAGELTEMIEAQRSY 411

Query: 112 MANLQTIKQSHDMMTTTLDLLR 133
            AN +  +   D+M   ++L R
Sbjct: 412 TANSKVFQTGSDIMDVLVNLKR 433



 Score = 48.3 bits (113), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 25/101 (24%), Positives = 41/101 (40%), Gaps = 4/101 (3%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             +  S   A SG+  Q+ R+  +S+NIAN  TTG    S  +    +      + SGGV
Sbjct: 1   MSIFGSMKTAVSGMNAQANRLSTVSDNIANVNTTGYKAVSTSFSSLVLPSSGGNYNSGGV 60

Query: 62  R--VKKIGVDQSTFVEEFDPGHPVANASGI--VKYPNVNVL 98
           +  V++   DQ              +  G   V+ P+   +
Sbjct: 61  QTSVRQAVSDQGDISYTTSTTDLAISGDGFFIVQGPDGTPV 101


>gi|170756722|ref|YP_001782271.1| flagellar hook protein flgE [Clostridium botulinum B1 str. Okra]
 gi|169121934|gb|ACA45770.1| flagellar hook protein flgE [Clostridium botulinum B1 str. Okra]
          Length = 344

 Score = 54.1 bits (128), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 23/129 (17%), Positives = 44/129 (34%), Gaps = 5/129 (3%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           + S  I   GL V S      +     A  +    G           + +   S      
Sbjct: 221 VQSFSIDKDGLLVASLVNGKSAALGQVAMASFKNEGG-----LEKMGKNLYKNSANSGEA 275

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
            I   + T  E  +        +G+++  NV++  E  +M   NR + A  + I    ++
Sbjct: 276 IIRTPRGTAEENRNDKGYGDMLNGMIEMSNVDLAEEFTEMIVANRAFQACGKMITTGDEI 335

Query: 125 MTTTLDLLR 133
           +   ++L R
Sbjct: 336 LQELVNLKR 344



 Score = 39.5 bits (90), Expect = 0.18,   Method: Composition-based stats.
 Identities = 14/42 (33%), Positives = 22/42 (52%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S +   SGL  Q  ++ I+  NIANA TT     S  ++
Sbjct: 1  MLRSMYSGISGLKAQQTKLDIVGNNIANANTTAFKSQSIRFQ 42


>gi|170748107|ref|YP_001754367.1| flagellar basal body rod protein FlgG [Methylobacterium
           radiotolerans JCM 2831]
 gi|170654629|gb|ACB23684.1| flagellar basal-body rod protein FlgG [Methylobacterium
           radiotolerans JCM 2831]
          Length = 262

 Score = 54.1 bits (128), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 20/42 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
             G ++  NV+ + E  ++    R +  N + I+ + +M  T
Sbjct: 215 QQGYLETSNVDPVREITNLISAQRAFEMNSKVIQAADEMAGT 256



 Score = 39.9 bits (91), Expect = 0.12,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 21/41 (51%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          + +  IA +G+  Q   +++I+ NI+N  TT        ++
Sbjct: 1  MRALAIAATGMNAQQLNVEVIANNISNLNTTAFKAARAEFK 41


>gi|153951334|ref|YP_001397315.1| flagellar hook protein [Campylobacter jejuni subsp. doylei 269.97]
 gi|152938780|gb|ABS43521.1| flagellar hook protein [Campylobacter jejuni subsp. doylei 269.97]
          Length = 545

 Score = 54.1 bits (128), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 26/48 (54%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             G ++  NV++  E +++  T + + A+ ++I  S  M+   +++ R
Sbjct: 498 KGGFLEQSNVDLSTELSNLIVTQKAFDASSKSITTSDQMIQKAINMKR 545


>gi|121997319|ref|YP_001002106.1| flagellar basal body FlaE domain-containing protein [Halorhodospira
           halophila SL1]
 gi|121588724|gb|ABM61304.1| flagellar basal body FlaE domain protein [Halorhodospira halophila
           SL1]
          Length = 418

 Score = 54.1 bits (128), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 15/98 (15%), Positives = 31/98 (31%)

Query: 34  TTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
           + G+          +   EE +   G    +         +     G      +G ++  
Sbjct: 320 SNGEAQAVGQVALTSFPSEEKLQSVGETSWQATRDAGDPLIGVPGQGQFGRVENGALEQS 379

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           NV V  +  +M    R + AN Q +     +    L++
Sbjct: 380 NVEVSDQLVNMITAQRNFSANAQMVSTQDQVTQEILNI 417



 Score = 35.2 bits (79), Expect = 3.3,   Method: Composition-based stats.
 Identities = 12/38 (31%), Positives = 20/38 (52%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          S +I+ +G+   S  ++  S N+ANA TTG       +
Sbjct: 2  SFNISLTGINSASKDLETTSNNLANAGTTGFKESRAEF 39


>gi|121997317|ref|YP_001002104.1| flagellar basal-body rod protein FlgG [Halorhodospira halophila
           SL1]
 gi|121588722|gb|ABM61302.1| flagellar basal-body rod protein FlgG [Halorhodospira halophila
           SL1]
          Length = 261

 Score = 54.1 bits (128), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 14/82 (17%), Positives = 26/82 (31%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +   G     +     +  V     G       G ++  NVN+  E  +M E  
Sbjct: 178 FINPSGLEPVGENMFLETAASGAPEVGAPGEGALGNVMQGALETSNVNIAEELVNMIENQ 237

Query: 109 RLYMANLQTIKQSHDMMTTTLD 130
           R +  N + I  + +M+     
Sbjct: 238 RGFETNTRAISTTDEMLQFLNQ 259



 Score = 41.8 bits (96), Expect = 0.032,   Method: Composition-based stats.
 Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 3/44 (6%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          MD    +  +A +GL  Q   MQ+ S N+AN  T G       +
Sbjct: 1  MDP---ALWVAKTGLDAQQKSMQVTSNNLANVNTNGFKKDRANF 41


>gi|91224197|ref|ZP_01259460.1| putative flagellar basal-body rod protein [Vibrio alginolyticus
           12G01]
 gi|269965646|ref|ZP_06179759.1| Putative flagellar basal-body rod protein flgG [Vibrio
           alginolyticus 40B]
 gi|91191108|gb|EAS77374.1| putative flagellar basal-body rod protein [Vibrio alginolyticus
           12G01]
 gi|269829714|gb|EEZ83950.1| Putative flagellar basal-body rod protein flgG [Vibrio
           alginolyticus 40B]
          Length = 261

 Score = 54.1 bits (128), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 25/78 (32%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                  +   GG   ++                      G ++  NV V+ E  DM  T
Sbjct: 177 KFINPAGLEAMGGNLFRETEASGPADELIAGADGAGIIKQGALEGSNVQVVEEMVDMITT 236

Query: 108 NRLYMANLQTIKQSHDMM 125
            R Y  N + +  + DM+
Sbjct: 237 QRAYEMNAKVVSAADDML 254



 Score = 40.2 bits (92), Expect = 0.085,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 28/72 (38%), Gaps = 4/72 (5%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          + ++  ++ +G+A Q  +M  IS N+AN  T G       +          +    G +V
Sbjct: 1  MHSALWVSKTGMAAQDTKMTAISNNLANVNTVGFKRDRVVF----EDLFYSIQRQPGAQV 56

Query: 64 KKIGVDQSTFVE 75
           ++    S    
Sbjct: 57 DQVNELPSGIQL 68


>gi|305432527|ref|ZP_07401689.1| flagellar hook protein [Campylobacter coli JV20]
 gi|304444566|gb|EFM37217.1| flagellar hook protein [Campylobacter coli JV20]
          Length = 545

 Score = 54.1 bits (128), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 26/48 (54%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             G ++  NV++  E +++  T + + A+ ++I  S  M+   +++ R
Sbjct: 498 KGGFLEQSNVDLSAELSNLIVTQKAFDASSKSITTSDQMIQKAINMKR 545


>gi|167623363|ref|YP_001673657.1| flagellar basal body rod protein FlgG [Shewanella halifaxensis
           HAW-EB4]
 gi|167353385|gb|ABZ75998.1| flagellar basal-body rod protein FlgG [Shewanella halifaxensis
           HAW-EB4]
          Length = 262

 Score = 54.1 bits (128), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 27/78 (34%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +   G     + G   +            A   G ++  NVNV  E  ++ E+ 
Sbjct: 179 FINPSGLDPMGQNLYLETGASGTPIQGTASLDGMGAIRQGALETSNVNVTEELVNLIESQ 238

Query: 109 RLYMANLQTIKQSHDMMT 126
           R+Y  N + I     M++
Sbjct: 239 RIYEMNSKVISAVDQMLS 256



 Score = 39.5 bits (90), Expect = 0.14,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  +  I+ +GL  Q   + +IS N+ANA T G       +
Sbjct: 1  MHPALWISKTGLDAQQTDISVISNNVANASTVGFKKSRAVF 41


>gi|23099019|ref|NP_692485.1| flagellar basal body rod protein FlgG [Oceanobacillus iheyensis
           HTE831]
 gi|22777247|dbj|BAC13520.1| flagellar hook-basal body protein [Oceanobacillus iheyensis HTE831]
          Length = 285

 Score = 54.1 bits (128), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 19/128 (14%), Positives = 40/128 (31%), Gaps = 2/128 (1%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
           ++ +I  S  +        +  N  +A       G       +        G+       
Sbjct: 160 STINIPESAQSFSVQSNGTV--NYIDANGDTQVAGQVALASFSNPSGLQKAGNNLYLDSP 217

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
                             +  SG ++  NV++  E  +M    R + AN + I  S +++
Sbjct: 218 NAGLAEQLYTPESDDLGSSVVSGALEMSNVDLSEEFTEMITAQRSFQANTRIITTSDEIL 277

Query: 126 TTTLDLLR 133
              ++L R
Sbjct: 278 QELVNLKR 285


>gi|110632640|ref|YP_672848.1| flagellar hook protein FlgE [Mesorhizobium sp. BNC1]
 gi|110283624|gb|ABG61683.1| flagellar basal body FlaE [Chelativorans sp. BNC1]
          Length = 422

 Score = 54.1 bits (128), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 17/84 (20%), Positives = 33/84 (39%)

Query: 50  SFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNR 109
           +  + +    G    +     +  +           ASG ++  NV++  E   M E+ R
Sbjct: 339 TSPDQLEVLSGNAFAETAASGAVRIGFAGSDGLGDIASGALESSNVDIAEELTSMIESQR 398

Query: 110 LYMANLQTIKQSHDMMTTTLDLLR 133
            Y AN +  +   D+M   ++L R
Sbjct: 399 SYTANSKVFQTGSDLMELLVNLKR 422



 Score = 45.2 bits (105), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 26/59 (44%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
            L        SG+  Q+ R+  +++NIAN+ T G    +  +    +   +  + SGG
Sbjct: 1  MSLYGMMKTGVSGMNAQANRLSTVADNIANSSTNGYKRATTEFSTLVVPGTQGSYNSGG 59


>gi|254698190|ref|ZP_05160018.1| flagellar hook protein FlgE [Brucella abortus bv. 2 str. 86/8/59]
 gi|260762637|ref|ZP_05874969.1| flagellar hook protein flgE [Brucella abortus bv. 2 str. 86/8/59]
 gi|260673058|gb|EEX59879.1| flagellar hook protein flgE [Brucella abortus bv. 2 str. 86/8/59]
          Length = 396

 Score = 54.1 bits (128), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 37/111 (33%), Gaps = 2/111 (1%)

Query: 25  ISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVA 84
           +  + A      +      YR    +       +       +   +S  V    P     
Sbjct: 286 VGNDGAVVAVYENGTQKVLYRIPLANVASPDRMTVVSGNIFLPSAESGDVRLGFPQGDGM 345

Query: 85  N--ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
               SG ++  N ++  E  DM E  R Y AN +  +   ++M   ++L R
Sbjct: 346 GKIMSGTLEESNADIAQELTDMIEAQRSYTANSKVFQTGFELMDVLVNLKR 396



 Score = 45.2 bits (105), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/90 (20%), Positives = 30/90 (33%), Gaps = 2/90 (2%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG- 60
            L        SG+  Q+ R+  +++NIANA T G       +    +      + SG  
Sbjct: 1  MSLYGMMRTGVSGMNAQANRLSTVADNIANASTVGYKRAETQFSSLVLPSTAGQYNSGSV 60

Query: 61 -VRVKKIGVDQSTFVEEFDPGHPVANASGI 89
             V+    DQ              + +G 
Sbjct: 61 LTDVRYGISDQGGIRSTSSTTDLTIDGNGY 90


>gi|268589980|ref|ZP_06124201.1| flagellar basal-body rod protein FlgG [Providencia rettgeri DSM
           1131]
 gi|291314698|gb|EFE55151.1| flagellar basal-body rod protein FlgG [Providencia rettgeri DSM
           1131]
          Length = 260

 Score = 54.1 bits (128), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 15/85 (17%), Positives = 27/85 (31%)

Query: 47  KTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
            T   +  +   G     +     +                 +++  NVNV  E  +M +
Sbjct: 176 TTFINDAGLESMGENLYMETASSGAPNESAPGTNGAGLLYQNMLETSNVNVAEELVNMIQ 235

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDL 131
           T R Y  N + +  S  M+     L
Sbjct: 236 TQRAYEINSKAVSASDQMLQRLTQL 260



 Score = 40.2 bits (92), Expect = 0.091,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 20/41 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I S  IA +GL  Q   + +IS N+AN  T G       +
Sbjct: 1  MIRSLWIAKTGLDAQQTNLDVISNNLANVSTNGFKRQRAVF 41


>gi|262404538|ref|ZP_06081093.1| flagellar basal-body rod protein FlgG [Vibrio sp. RC586]
 gi|262349570|gb|EEY98708.1| flagellar basal-body rod protein FlgG [Vibrio sp. RC586]
          Length = 262

 Score = 54.1 bits (128), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 23/72 (31%)

Query: 55  MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
           +   G       G                     +++  NVNV  E  +M E  R+Y  N
Sbjct: 185 LEPIGQNLYLPTGASGEPQEGVPGLDGLGDVRQSMLETSNVNVTEELVNMIEAQRVYEMN 244

Query: 115 LQTIKQSHDMMT 126
            + I     M++
Sbjct: 245 SKVISAVDKMLS 256



 Score = 41.4 bits (95), Expect = 0.039,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  +  ++ +GL  Q   +  IS N+ANA T G   G   +
Sbjct: 1  MQPALWVSKTGLDAQQTNIATISNNLANASTIGFKKGRAVF 41


>gi|260429561|ref|ZP_05783538.1| flagellar hook protein FlgE [Citreicella sp. SE45]
 gi|260420184|gb|EEX13437.1| flagellar hook protein FlgE [Citreicella sp. SE45]
          Length = 431

 Score = 54.1 bits (128), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 25/134 (18%), Positives = 46/134 (34%), Gaps = 8/134 (5%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
            A   I+  G +V +     + EN   +           Y    I   ++ + +G + V 
Sbjct: 301 FAPISISKDGSSVGNMVSVEVDENGYVSALYDSGQSQVLY---QIPLADLPNYNGMIAVD 357

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIV-----KYPNVNVLVETADMRETNRLYMANLQTIK 119
                 S     F         +G V     +    ++  E  DM  T R Y +N + I+
Sbjct: 358 GSTFRPSPESGSFFLWDAGDGPTGSVKSYARQESATDIARELTDMIRTQRAYSSNAKVIQ 417

Query: 120 QSHDMMTTTLDLLR 133
              +M+  T ++ R
Sbjct: 418 TVDEMLQETTNIKR 431



 Score = 40.6 bits (93), Expect = 0.071,   Method: Composition-based stats.
 Identities = 23/98 (23%), Positives = 37/98 (37%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            + +S +   SGL+  ++R+  IS+NIAN+ T G       +    +S     + +GG 
Sbjct: 1  MTISSSLNAGVSGLSGNASRLAAISDNIANSSTYGYRRVETDFTALVMSSGTRTYTAGGT 60

Query: 62 RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
           V  + V                   GI   P V V  
Sbjct: 61 SVDNLRVVDQGGALVSTSNATDLAIDGIGMLPVVAVSQ 98


>gi|239628984|ref|ZP_04672015.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239519130|gb|EEQ58996.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 541

 Score = 54.1 bits (128), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 26/54 (48%)

Query: 80  GHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
               A  +  ++  NV++  E ADM  T R + AN + I  S  ++   ++L R
Sbjct: 488 DGTGALKTSSLEMSNVDISTEFADMIVTQRGFQANSRIITVSDSILEELVNLKR 541



 Score = 34.8 bits (78), Expect = 3.7,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 21/58 (36%), Gaps = 4/58 (6%)

Query: 15 LAVQSARMQIISENIANARTTGDTPG----SDPYRRKTISFEEVMHGSGGVRVKKIGV 68
          +     ++ +I  NIAN  T G         D Y +   S     +  GG    ++G 
Sbjct: 1  MQAHQTKLDVIGNNIANVNTYGFKSSRARFQDVYYQTLQSATSGDNNRGGTNASQVGY 58


>gi|56695100|ref|YP_165447.1| flagellar basal body rod protein FlgG [Ruegeria pomeroyi DSS-3]
 gi|56676837|gb|AAV93503.1| flagellar basal-body rod protein FlgG [Ruegeria pomeroyi DSS-3]
          Length = 261

 Score = 54.1 bits (128), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 14/82 (17%), Positives = 27/82 (32%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +  + +   G    K+     S                G ++  +V+ + E  ++ E  
Sbjct: 178 FTNAKGLEAIGSNLFKETEASGSPITGNPGEDGLGTLRQGYLEDSSVDAVREVTELIEAQ 237

Query: 109 RLYMANLQTIKQSHDMMTTTLD 130
           R Y  N + I     MM+ T  
Sbjct: 238 RGYEMNAKVISAVDQMMSATTQ 259



 Score = 45.6 bits (106), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 22/41 (53%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          + +  IA +G++ Q  R++ IS N+AN  TTG       + 
Sbjct: 1  MRALKIAATGMSAQQMRVETISNNLANMNTTGYNARRAEFA 41


>gi|85058011|ref|YP_453713.1| flagellar hook protein FlgE [Sodalis glossinidius str. 'morsitans']
 gi|84778531|dbj|BAE73308.1| flagellar hook protein FlgE [Sodalis glossinidius str. 'morsitans']
          Length = 404

 Score = 54.1 bits (128), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 31/77 (40%)

Query: 55  MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
           +  SG     + G   +  +   D G        +++  NV++  E   M    R Y +N
Sbjct: 327 LQPSGDNCWTETGASGAPLIGTSDTGSFGVIRGKMLEASNVDMSNELVKMMTQQRNYQSN 386

Query: 115 LQTIKQSHDMMTTTLDL 131
            QTIK    ++ T + +
Sbjct: 387 AQTIKTQDQLLQTLVSM 403



 Score = 33.7 bits (75), Expect = 9.8,   Method: Composition-based stats.
 Identities = 12/35 (34%), Positives = 17/35 (48%)

Query: 11 ANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
            SGL   +  + +I  NIANA+T G    S  + 
Sbjct: 6  GVSGLNAAAQALDVIGNNIANAQTVGFKSSSASFA 40


>gi|284925346|gb|ADC27698.1| flagellar hook protein [Campylobacter jejuni subsp. jejuni IA3902]
          Length = 544

 Score = 54.1 bits (128), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 26/48 (54%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             G ++  NV++  E +++  T + + A+ ++I  S  M+   +++ R
Sbjct: 497 KGGFLEQSNVDLSAELSNLIVTQKAFDASSKSITTSDQMIQKAINMKR 544


>gi|62317957|ref|YP_223810.1| flagellar hook protein FlgE [Brucella abortus bv. 1 str. 9-941]
 gi|83269934|ref|YP_419225.1| flagellar hook protein FlgE [Brucella melitensis biovar Abortus
           2308]
 gi|189023208|ref|YP_001932949.1| flagellar hook protein FlgE [Brucella abortus S19]
 gi|225686885|ref|YP_002734857.1| flagellar hook protein FlgE [Brucella melitensis ATCC 23457]
 gi|254691611|ref|ZP_05154865.1| flagellar hook protein FlgE [Brucella abortus bv. 6 str. 870]
 gi|254731634|ref|ZP_05190212.1| flagellar hook protein FlgE [Brucella abortus bv. 4 str. 292]
 gi|256112177|ref|ZP_05453098.1| flagellar hook protein FlgE [Brucella melitensis bv. 3 str. Ether]
 gi|256256798|ref|ZP_05462334.1| flagellar hook protein FlgE [Brucella abortus bv. 9 str. C68]
 gi|256261978|ref|ZP_05464510.1| trypsin inhibitor Kunitz [Brucella melitensis bv. 2 str. 63/9]
 gi|260544142|ref|ZP_05819963.1| trypsin inhibitor Kunitz [Brucella abortus NCTC 8038]
 gi|260757242|ref|ZP_05869590.1| flagellar hook protein flgE [Brucella abortus bv. 6 str. 870]
 gi|260759393|ref|ZP_05871741.1| flagellar hook protein flgE [Brucella abortus bv. 4 str. 292]
 gi|260883046|ref|ZP_05894660.1| flagellar hook protein flgE [Brucella abortus bv. 9 str. C68]
 gi|265993603|ref|ZP_06106160.1| flagellar hook protein flgE [Brucella melitensis bv. 3 str. Ether]
 gi|297250151|ref|ZP_06933852.1| flagellar hook protein flgE [Brucella abortus bv. 5 str. B3196]
 gi|68845076|sp|O52070|FLGE_BRUAB RecName: Full=Flagellar hook protein flgE
 gi|12330680|gb|AAG52877.1| FlgE [Brucella abortus]
 gi|62198150|gb|AAX76449.1| FlgE, flagellar hook protein [Brucella abortus bv. 1 str. 9-941]
 gi|82940208|emb|CAJ13264.1| Flagellar basal body rod protein:Trypsin inhibitor Kunitz [Brucella
           melitensis biovar Abortus 2308]
 gi|189021782|gb|ACD74503.1| Trypsin inhibitor Kunitz [Brucella abortus S19]
 gi|225642990|gb|ACO02903.1| flagellar basal body FlaE domain protein [Brucella melitensis ATCC
           23457]
 gi|260097413|gb|EEW81287.1| trypsin inhibitor Kunitz [Brucella abortus NCTC 8038]
 gi|260669711|gb|EEX56651.1| flagellar hook protein flgE [Brucella abortus bv. 4 str. 292]
 gi|260677350|gb|EEX64171.1| flagellar hook protein flgE [Brucella abortus bv. 6 str. 870]
 gi|260872574|gb|EEX79643.1| flagellar hook protein flgE [Brucella abortus bv. 9 str. C68]
 gi|262764473|gb|EEZ10505.1| flagellar hook protein flgE [Brucella melitensis bv. 3 str. Ether]
 gi|263091462|gb|EEZ15998.1| trypsin inhibitor Kunitz [Brucella melitensis bv. 2 str. 63/9]
 gi|297174020|gb|EFH33384.1| flagellar hook protein flgE [Brucella abortus bv. 5 str. B3196]
 gi|326411303|gb|ADZ68367.1| flagellar hook protein FlgE [Brucella melitensis M28]
 gi|326554592|gb|ADZ89231.1| flagellar hook protein FlgE [Brucella melitensis M5-90]
          Length = 396

 Score = 54.1 bits (128), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 37/111 (33%), Gaps = 2/111 (1%)

Query: 25  ISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVA 84
           +  + A      +      YR    +       +       +   +S  V    P     
Sbjct: 286 VGNDGAVVAVYENGTQKVLYRIPLANVASPDRMTVVSGNIFLPSAESGDVRLGFPQGDGM 345

Query: 85  N--ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
               SG ++  N ++  E  DM E  R Y AN +  +   ++M   ++L R
Sbjct: 346 GKIMSGTLEESNADIAQELTDMIEAQRSYTANSKVFQTGFELMDVLVNLKR 396



 Score = 44.9 bits (104), Expect = 0.004,   Method: Composition-based stats.
 Identities = 18/90 (20%), Positives = 30/90 (33%), Gaps = 2/90 (2%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG- 60
            L        SG+  Q+ R+  +++NIANA T G       +    +      + SG  
Sbjct: 1  MSLYGMMRTGVSGMNAQANRLSTVADNIANASTVGYKRAETQFSSLVLPSTAGQYNSGSV 60

Query: 61 -VRVKKIGVDQSTFVEEFDPGHPVANASGI 89
             V+    DQ              + +G 
Sbjct: 61 LTDVRYGISDQGGIRSTSSTTDLAIDGNGY 90


>gi|283955493|ref|ZP_06372988.1| flagellar hook protein flgE [Campylobacter jejuni subsp. jejuni
           1336]
 gi|283792954|gb|EFC31728.1| flagellar hook protein flgE [Campylobacter jejuni subsp. jejuni
           1336]
          Length = 545

 Score = 54.1 bits (128), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 27/48 (56%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             G ++  NV++ VE +++  T + + A+ ++I  S  M+   +++ R
Sbjct: 498 KGGFLEQSNVDLSVELSNLIVTQKAFDASSKSITTSDQMIQKAINMKR 545


>gi|17988503|ref|NP_541136.1| flagellar hook protein FlgE [Brucella melitensis bv. 1 str. 16M]
 gi|256042866|ref|ZP_05445812.1| flagellar hook protein FlgE [Brucella melitensis bv. 1 str. Rev.1]
 gi|260564103|ref|ZP_05834588.1| flagellar hook protein flgE [Brucella melitensis bv. 1 str. 16M]
 gi|265989301|ref|ZP_06101858.1| flagellar hook protein flgE [Brucella melitensis bv. 1 str. Rev.1]
 gi|38257707|sp|Q8YDL6|FLGE_BRUME RecName: Full=Flagellar hook protein flgE
 gi|17984295|gb|AAL53400.1| flagellar hook protein flge [Brucella melitensis bv. 1 str. 16M]
 gi|260151746|gb|EEW86839.1| flagellar hook protein flgE [Brucella melitensis bv. 1 str. 16M]
 gi|262999970|gb|EEZ12660.1| flagellar hook protein flgE [Brucella melitensis bv. 1 str. Rev.1]
          Length = 396

 Score = 54.1 bits (128), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 37/111 (33%), Gaps = 2/111 (1%)

Query: 25  ISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVA 84
           +  + A      +      YR    +       +       +   +S  V    P     
Sbjct: 286 VGNDGAVVAVYENGTQKVLYRIPLANVASPDRMTVVSGNIFLPSAESGDVRLGFPQGDGM 345

Query: 85  N--ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
               SG ++  N ++  E  DM E  R Y AN +  +   ++M   ++L R
Sbjct: 346 GKIMSGTLEESNADIAQELTDMIEAQRSYTANSKVFQTGFELMDVLVNLKR 396



 Score = 44.9 bits (104), Expect = 0.004,   Method: Composition-based stats.
 Identities = 18/90 (20%), Positives = 30/90 (33%), Gaps = 2/90 (2%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG- 60
            L        SG+  Q+ R+  +++NIANA T G       +    +      + SG  
Sbjct: 1  MSLYGMMRTGVSGMNAQANRLSTVADNIANASTVGYKRAETQFSSLVLPSTAGQYNSGSV 60

Query: 61 -VRVKKIGVDQSTFVEEFDPGHPVANASGI 89
             V+    DQ              + +G 
Sbjct: 61 LTDVRYGISDQGGIRSTSSTTDLAIDGNGY 90


>gi|296186751|ref|ZP_06855153.1| flagellar hook-associated protein FlgK [Clostridium
          carboxidivorans P7]
 gi|296048788|gb|EFG88220.1| flagellar hook-associated protein FlgK [Clostridium
          carboxidivorans P7]
          Length = 463

 Score = 54.1 bits (128), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 32/78 (41%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  L  + +I+ SG+  Q   + + S NIANA T G +      +         ++ + G
Sbjct: 1  MSGLFGTLNISKSGMFAQQRCIDVTSHNIANANTDGYSRQRAELQTTKPFPMPSVNNAVG 60

Query: 61 VRVKKIGVDQSTFVEEFD 78
                GV+ +T     D
Sbjct: 61 PGQLGTGVEVTTIDRIRD 78


>gi|304317904|ref|YP_003853049.1| flagellar basal-body rod protein FlgF [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302779406|gb|ADL69965.1| flagellar basal-body rod protein FlgF [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 248

 Score = 54.1 bits (128), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 21/47 (44%)

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           A   G ++  NVN + E   M    R Y AN +T+    + +   ++
Sbjct: 197 AVKQGYLEGSNVNPVDEMVTMISAMRTYEANQKTVSAFDETLDKAVN 243



 Score = 38.7 bits (88), Expect = 0.25,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 24/67 (35%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++   + A+SG+  Q   + ++S NIAN  T+G    +               G      
Sbjct: 1  MLRGLYTASSGMIAQQKIVDVLSNNIANVNTSGYKKDTVTTMAFPDFMVTRSGGDNVPYN 60

Query: 64 KKIGVDQ 70
            IG   
Sbjct: 61 GYIGNMD 67


>gi|218660672|ref|ZP_03516602.1| flagellar hook protein FlgE [Rhizobium etli IE4771]
          Length = 374

 Score = 54.1 bits (128), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 31/82 (37%)

Query: 52  EEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
            + +    G      G    T              SG ++  NV++  E  +M E+ R Y
Sbjct: 293 PDKLTLMSGNVYSANGQSGVTVTGFPQTNGLGTIKSGALEGSNVDLAGELTEMIESQRSY 352

Query: 112 MANLQTIKQSHDMMTTTLDLLR 133
            AN +  +   D+M   ++L R
Sbjct: 353 TANSKVFQTGSDIMDVLVNLKR 374


>gi|315057484|gb|ADT71813.1| Flagellar hook protein flgE [Campylobacter jejuni subsp. jejuni S3]
 gi|315926889|gb|EFV06255.1| flagella basal body rod family protein [Campylobacter jejuni subsp.
           jejuni DFVF1099]
 gi|315926904|gb|EFV06270.1| flagella basal body rod family protein [Campylobacter jejuni subsp.
           jejuni DFVF1099]
          Length = 544

 Score = 54.1 bits (128), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 26/48 (54%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             G ++  NV++  E +++  T + + A+ ++I  S  M+   +++ R
Sbjct: 497 KGGFLEQSNVDLSAELSNLIVTQKAFDASSKSITTSDQMIQKAINMKR 544


>gi|303248240|ref|ZP_07334503.1| flagellar basal-body rod protein FlgF [Desulfovibrio fructosovorans
           JJ]
 gi|302490378|gb|EFL50289.1| flagellar basal-body rod protein FlgF [Desulfovibrio fructosovorans
           JJ]
          Length = 261

 Score = 54.1 bits (128), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 14/46 (30%), Positives = 26/46 (56%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
            G ++ PNV V+ E  +M ET R Y A  + +  ++D+ T ++ + 
Sbjct: 212 QGYLEKPNVQVVEEMVNMIETQRTYEAYQKVMTNTNDLDTKSIRMG 257


>gi|57169039|ref|ZP_00368167.1| flagellar hook protein flgE Cj0043 [Campylobacter coli RM2228]
 gi|57019584|gb|EAL56274.1| flagellar hook protein flgE Cj0043 [Campylobacter coli RM2228]
          Length = 545

 Score = 54.1 bits (128), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 26/48 (54%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             G ++  NV++  E +++  T + + A+ ++I  S  M+   +++ R
Sbjct: 498 KGGFLEQSNVDLSAELSNLIVTQKAFDASSKSITTSDQMIQKAINMKR 545


>gi|323495375|ref|ZP_08100452.1| flagellar basal body rod protein FlgG [Vibrio brasiliensis LMG
           20546]
 gi|323310298|gb|EGA63485.1| flagellar basal body rod protein FlgG [Vibrio brasiliensis LMG
           20546]
          Length = 262

 Score = 54.1 bits (128), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 23/78 (29%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +   G       G                     +++  NVNV  E  +M E  
Sbjct: 179 FVNPGGLEPIGQNLYLPTGASGDPQEGVPGFDGFGEVRQSMLETSNVNVTEELVNMIEAQ 238

Query: 109 RLYMANLQTIKQSHDMMT 126
           R+Y  N + I     MM+
Sbjct: 239 RVYEMNSKVISAVDKMMS 256



 Score = 40.2 bits (92), Expect = 0.085,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 19/41 (46%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  +  ++ +GL  Q   +  IS N+ANA T G       +
Sbjct: 1  MHPALWVSKTGLDAQQTNISTISNNLANASTVGYKKSRAVF 41


>gi|315123658|ref|YP_004065662.1| flagellar hook protein [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
 gi|315017380|gb|ADT65473.1| flagellar hook protein [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
          Length = 544

 Score = 54.1 bits (128), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 26/48 (54%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             G ++  NV++  E +++  T + + A+ ++I  S  M+   +++ R
Sbjct: 497 KGGFLEQSNVDLSAELSNLIVTQKAFDASSKSITTSDQMIQKAINMKR 544


>gi|119384847|ref|YP_915903.1| flagellar basal body rod protein FlgG [Paracoccus denitrificans
           PD1222]
 gi|119374614|gb|ABL70207.1| flagellar basal-body rod protein FlgG [Paracoccus denitrificans
           PD1222]
          Length = 261

 Score = 54.1 bits (128), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 15/115 (13%), Positives = 36/115 (31%)

Query: 16  AVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVE 75
             +S  +    +  A      +               + +   G     +     +  V 
Sbjct: 145 DARSIAINADGQVFAYFDDRVEPENLGQITLANFVNGKGLEAVGSNMFLETPASGAPQVA 204

Query: 76  EFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
                      +G ++  +V+ + E A++ +  R Y  N + I  +  M+ TT+ 
Sbjct: 205 APGQEGLGTIRAGFLEESSVDPVREIAELIKAQRGYELNSKVITAADQMLGTTVQ 259



 Score = 46.4 bits (108), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 23/62 (37%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          + +  IA SG++ Q  R+ +IS N+AN  TTG       +                    
Sbjct: 1  MRALQIAASGMSAQQMRVDVISNNLANMSTTGYNARRAEFADLQYQQATRPGTLTATNGA 60

Query: 65 KI 66
           +
Sbjct: 61 MV 62


>gi|260768780|ref|ZP_05877714.1| flagellar basal-body rod protein FlgG [Vibrio furnissii CIP 102972]
 gi|260616810|gb|EEX41995.1| flagellar basal-body rod protein FlgG [Vibrio furnissii CIP 102972]
 gi|315180483|gb|ADT87397.1| hypothetical flagellar basal-body rod protein [Vibrio furnissii
           NCTC 11218]
          Length = 261

 Score = 54.1 bits (128), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 13/97 (13%), Positives = 25/97 (25%)

Query: 30  ANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGI 89
           A      +                 +   G   + +                      G 
Sbjct: 159 AVVSGQVEPEQLGEITLVKFMNPSGLTAKGANLLAETEASGEAMELVAGTDGAGVIKQGA 218

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           ++  NV V+ E  DM  T R Y  + + +  +  M+ 
Sbjct: 219 LETSNVQVVEEMVDMISTQRAYEMSAKMVSAADQMLQ 255



 Score = 39.9 bits (91), Expect = 0.12,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 21/41 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  +  I+ +G+A Q A+M  IS N+AN  T G       +
Sbjct: 1  MHNALMISKTGMAAQDAKMTAISNNLANVNTVGFKRDRVVF 41


>gi|319787119|ref|YP_004146594.1| flagellar basal-body rod protein FlgG [Pseudoxanthomonas suwonensis
           11-1]
 gi|317465631|gb|ADV27363.1| flagellar basal-body rod protein FlgG [Pseudoxanthomonas suwonensis
           11-1]
          Length = 261

 Score = 54.1 bits (128), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 18/114 (15%), Positives = 28/114 (24%)

Query: 17  VQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEE 76
            QS  +             G                  +   G     +           
Sbjct: 146 AQSMTIGTDGTITVQMAGDGQALEIGALTLTDFINPAGLQARGENLYMETTASGPAQNGT 205

Query: 77  FDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
                      G ++  NVNV+ E   M ET R Y  N + I  +  M+    +
Sbjct: 206 PGLNGLGLVEQGALEGSNVNVVEELVSMIETQRAYEMNAKAISTTDSMLGYLNN 259



 Score = 42.9 bits (99), Expect = 0.013,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 21/41 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  +  +A +GL  Q  RM +++ N+AN  TTG       +
Sbjct: 1  MNQALWVAKTGLDAQQTRMSVVANNLANTNTTGFKRDRANF 41


>gi|127512281|ref|YP_001093478.1| flagellar basal body rod protein FlgG [Shewanella loihica PV-4]
 gi|126637576|gb|ABO23219.1| flagellar basal-body rod protein FlgG [Shewanella loihica PV-4]
          Length = 262

 Score = 54.1 bits (128), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 27/78 (34%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +   G     + G   +            A   G ++  NVNV  E  ++ E+ 
Sbjct: 179 FINPSGLDPMGQNLYLETGASGTPIQGTASLDGMGAIRQGALETSNVNVTEELVNLIESQ 238

Query: 109 RLYMANLQTIKQSHDMMT 126
           R+Y  N + I     M++
Sbjct: 239 RIYEMNSKVISAVDQMLS 256



 Score = 39.9 bits (91), Expect = 0.13,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  +  I+ +GL  Q   + +IS N+ANA T G       +
Sbjct: 1  MHPALWISKTGLDAQQTDISVISNNVANASTVGYKKSRAVF 41


>gi|148380612|ref|YP_001255153.1| flagellar hook protein flgE [Clostridium botulinum A str. ATCC
           3502]
 gi|153934204|ref|YP_001384898.1| flagellar hook protein flgE [Clostridium botulinum A str. ATCC
           19397]
 gi|153936013|ref|YP_001388367.1| flagellar hook protein flgE [Clostridium botulinum A str. Hall]
 gi|148290096|emb|CAL84215.1| flagellar hook protein [Clostridium botulinum A str. ATCC 3502]
 gi|152930248|gb|ABS35748.1| flagellar hook protein flgE [Clostridium botulinum A str. ATCC
           19397]
 gi|152931927|gb|ABS37426.1| flagellar hook protein flgE [Clostridium botulinum A str. Hall]
          Length = 345

 Score = 54.1 bits (128), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 23/129 (17%), Positives = 44/129 (34%), Gaps = 5/129 (3%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           + S  I   GL V S      +     A  +    G           + +   S      
Sbjct: 222 VQSFSIDKDGLLVASLVNGKSAALGQVAMASFKNEGG-----LEKMGKNLYKNSANSGEA 276

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
            I   + T  E  +        +G+++  NV++  E  +M   NR + A  + I    ++
Sbjct: 277 IIRTPRGTAEENRNDKGYGDMLNGMIEMSNVDLAEEFTEMIVANRAFQACGKMITTGDEI 336

Query: 125 MTTTLDLLR 133
           +   ++L R
Sbjct: 337 LQELVNLKR 345



 Score = 39.1 bits (89), Expect = 0.20,   Method: Composition-based stats.
 Identities = 14/42 (33%), Positives = 22/42 (52%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S +   SGL  Q  ++ I+  NIANA TT     S  ++
Sbjct: 1  MLRSMYSGISGLKAQQTKLDIVGNNIANANTTAFKSQSIRFQ 42


>gi|121612241|ref|YP_999769.1| flagellar hook protein [Campylobacter jejuni subsp. jejuni 81-176]
 gi|157414368|ref|YP_001481624.1| flagellar hook protein [Campylobacter jejuni subsp. jejuni 81116]
 gi|167004743|ref|ZP_02270501.1| flagellar hook protein flgE [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|87249055|gb|EAQ72017.1| flagellar hook protein [Campylobacter jejuni subsp. jejuni 81-176]
 gi|157385332|gb|ABV51647.1| flagellar hook protein flgE [Campylobacter jejuni subsp. jejuni
           81116]
 gi|307747010|gb|ADN90280.1| Flagellar hook protein [Campylobacter jejuni subsp. jejuni M1]
 gi|315931630|gb|EFV10595.1| flagella basal body rod family protein [Campylobacter jejuni subsp.
           jejuni 327]
          Length = 545

 Score = 54.1 bits (128), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 26/48 (54%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             G ++  NV++  E +++  T + + A+ ++I  S  M+   +++ R
Sbjct: 498 KGGFLEQSNVDLSAELSNLIVTQKAFDASSKSITTSDQMIQKAINMKR 545


>gi|86149558|ref|ZP_01067788.1| flagellar hook protein [Campylobacter jejuni subsp. jejuni CF93-6]
 gi|85839826|gb|EAQ57085.1| flagellar hook protein [Campylobacter jejuni subsp. jejuni CF93-6]
          Length = 545

 Score = 54.1 bits (128), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 26/48 (54%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             G ++  NV++  E +++  T + + A+ ++I  S  M+   +++ R
Sbjct: 498 KGGFLEQSNVDLSAELSNLIVTQKAFDASSKSITTSDQMIQKAINMKR 545


>gi|86136709|ref|ZP_01055287.1| flagellar hook protein FlgE, putative [Roseobacter sp. MED193]
 gi|85826033|gb|EAQ46230.1| flagellar hook protein FlgE, putative [Roseobacter sp. MED193]
          Length = 388

 Score = 54.1 bits (128), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 22/43 (51%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +    +V  E  DM +T R Y +N + I+   +M+  T ++ R
Sbjct: 346 EESATDVATELTDMIKTQRAYSSNAKVIQTVDEMLQETTNIKR 388


>gi|146278769|ref|YP_001168928.1| hypothetical protein Rsph17025_2736 [Rhodobacter sphaeroides ATCC
           17025]
 gi|145557010|gb|ABP71623.1| protein of unknown function DUF1078 domain protein [Rhodobacter
           sphaeroides ATCC 17025]
          Length = 474

 Score = 54.1 bits (128), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 22/43 (51%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +    +V  E  ++ +T R Y +N + I+   +M+  T +L R
Sbjct: 432 EGSTTDVAQELTNLIQTQRAYSSNAKIIQTVDEMLQETTNLKR 474



 Score = 33.7 bits (75), Expect = 8.4,   Method: Composition-based stats.
 Identities = 12/64 (18%), Positives = 25/64 (39%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            + +S +   +GL   + ++  I++NIAN+ T G       +    I+           
Sbjct: 1  MTISSSLNAGVAGLYANATKLASIADNIANSGTYGYKRADADFESMVITQSANSGTYSAG 60

Query: 62 RVKK 65
           V+ 
Sbjct: 61 GVRA 64


>gi|261253612|ref|ZP_05946185.1| flagellar basal-body rod protein FlgG [Vibrio orientalis CIP
           102891]
 gi|260937003|gb|EEX92992.1| flagellar basal-body rod protein FlgG [Vibrio orientalis CIP
           102891]
          Length = 262

 Score = 54.1 bits (128), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 29/111 (26%)

Query: 16  AVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVE 75
             QS  +    E     R   D                 +   G       G        
Sbjct: 146 DAQSITIGTDGEVSVRIRGQQDNQVVGQIATVDFVNPGGLEPIGQNLYMATGASGDPQEG 205

Query: 76  EFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
                        +++  NVNV  E  +M E  R+Y  N + I     MM+
Sbjct: 206 VPGFDGFGDVRQSMLETSNVNVTEELVNMIEAQRVYEMNSKVISAVDKMMS 256



 Score = 39.9 bits (91), Expect = 0.13,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 19/41 (46%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  +  ++ +GL  Q   +  IS N+ANA T G       +
Sbjct: 1  MHPALWVSKTGLDAQQTNISTISNNLANASTVGYKKSRAVF 41


>gi|163735543|ref|ZP_02142975.1| flagellar hook protein FlgE, putative [Roseobacter litoralis Och
           149]
 gi|161391163|gb|EDQ15500.1| flagellar hook protein FlgE, putative [Roseobacter litoralis Och
           149]
          Length = 416

 Score = 54.1 bits (128), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 22/43 (51%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +    +V  E  DM +T R Y +N + I+   +M+  T ++ R
Sbjct: 374 EESTTDVAGELTDMIKTQRAYSSNAKVIQTVDEMLQETTNIKR 416


>gi|221640825|ref|YP_002527087.1| flagellar basal body rod protein FlgG [Rhodobacter sphaeroides
           KD131]
 gi|332559802|ref|ZP_08414124.1| FlgG2 [Rhodobacter sphaeroides WS8N]
 gi|221161606|gb|ACM02586.1| Flagellar basal-body rod protein FlgG precursor [Rhodobacter
           sphaeroides KD131]
 gi|332277514|gb|EGJ22829.1| FlgG2 [Rhodobacter sphaeroides WS8N]
          Length = 261

 Score = 54.1 bits (128), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 11/80 (13%), Positives = 26/80 (32%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            + E+ +   G     +                      G ++  +V+ + E  ++ +  
Sbjct: 178 FTNEKGLEAIGSNLFLETAASGPPIAGVAGEDGFGTLRQGYLEESSVDSVQEITELIKAQ 237

Query: 109 RLYMANLQTIKQSHDMMTTT 128
           R Y  N + I  +  M+  T
Sbjct: 238 RGYELNAKVITAADQMLAAT 257



 Score = 47.6 bits (111), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 22/41 (53%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          + +  IA +G++ Q  R+ +IS N+AN  TTG       + 
Sbjct: 1  MKALQIAATGMSAQQTRVDVISNNLANMSTTGYNARRADFA 41


>gi|148926857|ref|ZP_01810535.1| flagellar hook protein flgE [Campylobacter jejuni subsp. jejuni
           CG8486]
 gi|145844434|gb|EDK21542.1| flagellar hook protein flgE [Campylobacter jejuni subsp. jejuni
           CG8486]
          Length = 545

 Score = 54.1 bits (128), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 26/48 (54%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             G ++  NV++  E +++  T + + A+ ++I  S  M+   +++ R
Sbjct: 498 KGGFLEQSNVDLSAELSNLIVTQKAFDASSKSITTSDQMIQKAINMKR 545


>gi|86154050|ref|ZP_01072251.1| flagellar hook protein [Campylobacter jejuni subsp. jejuni HB93-13]
 gi|85842464|gb|EAQ59678.1| flagellar hook protein [Campylobacter jejuni subsp. jejuni HB93-13]
          Length = 545

 Score = 54.1 bits (128), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 26/48 (54%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             G ++  NV++  E +++  T + + A+ ++I  S  M+   +++ R
Sbjct: 498 KGGFLEQSNVDLSAELSNLIVTQKAFDASSKSITTSDQMIQKAINMKR 545


>gi|283955452|ref|ZP_06372950.1| flagellar hook protein flgE [Campylobacter jejuni subsp. jejuni
           414]
 gi|283793079|gb|EFC31850.1| flagellar hook protein flgE [Campylobacter jejuni subsp. jejuni
           414]
          Length = 544

 Score = 54.1 bits (128), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 27/48 (56%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             G ++  NV++ VE +++  T + + A+ ++I  S  M+   +++ R
Sbjct: 497 KGGFLEQSNVDLSVELSNLIVTQKAFDASSKSITTSDQMIQKAINMKR 544


>gi|167576662|ref|ZP_02369536.1| flagellar hook protein flgE [Burkholderia thailandensis TXDOH]
          Length = 395

 Score = 54.1 bits (128), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 18/41 (43%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           ++  N +V  E  DM    R Y AN + +   + MM   + 
Sbjct: 353 LELSNADVTKELVDMMSAQRNYQANSKVLSTENQMMQALMQ 393



 Score = 39.9 bits (91), Expect = 0.12,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 24/56 (42%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
          S +IA SG+   ++++  IS NIAN+ T G   G   +       +      G   
Sbjct: 2  SFNIALSGINAINSQLNTISHNIANSNTYGFKAGRANFATMVAGTQANGTYIGSTT 57


>gi|83814503|ref|YP_446705.1| flagellar biosynthesis cell-distal portion of basal-body rod
           [Salinibacter ruber DSM 13855]
 gi|294508641|ref|YP_003572700.1| flagellar hook protein FlgE [Salinibacter ruber M8]
 gi|83755897|gb|ABC44010.1| flagellar biosynthesis cell-distal portion of basal-body rod
           [Salinibacter ruber DSM 13855]
 gi|294344970|emb|CBH25748.1| Flagellar hook protein FlgE [Salinibacter ruber M8]
          Length = 432

 Score = 54.1 bits (128), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 28/52 (53%)

Query: 82  PVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             +  SG ++  NV++  E +D+ +  R Y A+ Q I  + +++  T+ L R
Sbjct: 381 QTSVVSGALESSNVDLAKEFSDLIKAQRSYQASSQIITTADEVLNQTVQLKR 432



 Score = 40.6 bits (93), Expect = 0.080,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 18/40 (45%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          + S  I  SGL     R+  +S NIAN+ TT        +
Sbjct: 3  LQSLSIGVSGLRSHQTRLDTVSNNIANSSTTAFKRQRAAF 42


>gi|117926380|ref|YP_866997.1| flagellar basal body rod protein [Magnetococcus sp. MC-1]
 gi|117610136|gb|ABK45591.1| flagellar basal body rod protein [Magnetococcus sp. MC-1]
          Length = 269

 Score = 54.1 bits (128), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 16/107 (14%), Positives = 32/107 (29%), Gaps = 6/107 (5%)

Query: 28  NIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANAS 87
           NIA                +     E +   G  + K     +          H      
Sbjct: 165 NIAPDGFVTSNGEEVGTIARVKLPSEQLDKVGQNQYKAPQDLEVPVDAAQAQVH-----Q 219

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD-LLR 133
           G ++  N N +     M E  R Y  +++ I+   ++    ++ + R
Sbjct: 220 GFLEGSNSNPIRAMTQMIEAQRAYEMHIKMIQNLDNLDDQAVNRIGR 266


>gi|207108617|ref|ZP_03242779.1| flagellar hook protein FlgE [Helicobacter pylori HPKX_438_CA4C1]
          Length = 294

 Score = 54.1 bits (128), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 13/85 (15%), Positives = 34/85 (40%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            + +  +   GG    + G      +   + G   + +   ++  NV++     ++    
Sbjct: 210 FANDAGLQALGGNVFSQTGNSGQALIGAANTGRRGSISGSKLESSNVDLSRSLTNLIVVQ 269

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R + AN + +  S  ++ T L+L +
Sbjct: 270 RGFQANSKAVTTSDQILNTLLNLKQ 294


>gi|296126058|ref|YP_003633310.1| fagellar hook-basal body protein [Brachyspira murdochii DSM 12563]
 gi|296017874|gb|ADG71111.1| fagellar hook-basal body protein [Brachyspira murdochii DSM 12563]
          Length = 441

 Score = 54.1 bits (128), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 23/44 (52%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  NV++  +  DM  T R + +N +TI  +  M+   + L R
Sbjct: 398 LEMSNVDLSEQFTDMIVTQRGFQSNARTITTADQMLQEVIALKR 441



 Score = 39.9 bits (91), Expect = 0.13,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 19/42 (45%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S     SGL     RM ++  NIAN  T G   G   ++
Sbjct: 1  MMRSLFAGVSGLQNHQTRMDVVGNNIANVNTYGFKRGRVTFK 42


>gi|187778686|ref|ZP_02995159.1| hypothetical protein CLOSPO_02281 [Clostridium sporogenes ATCC
          15579]
 gi|187772311|gb|EDU36113.1| hypothetical protein CLOSPO_02281 [Clostridium sporogenes ATCC
          15579]
          Length = 624

 Score = 54.1 bits (128), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 28/78 (35%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  L  + +I  SG+  Q   +   S NIANA T G +      +      +  M+ + G
Sbjct: 4  MSGLFGTLNIGKSGMFAQQGAINTTSHNIANANTEGYSRQRVELQTTRPYCKPSMNSAAG 63

Query: 61 VRVKKIGVDQSTFVEEFD 78
                GV         D
Sbjct: 64 PGQVGTGVQIVAINRVRD 81



 Score = 38.3 bits (87), Expect = 0.31,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 20/41 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             V++  E A++ + N  Y AN + I     ++   ++ L+
Sbjct: 583 SGVSLDEEFANLVQFNHCYQANAKIISTVDQLLDVVINGLK 623


>gi|150395485|ref|YP_001325952.1| flagellar basal body rod protein FlgG [Sinorhizobium medicae
           WSM419]
 gi|150027000|gb|ABR59117.1| flagellar basal-body rod protein FlgG [Sinorhizobium medicae
           WSM419]
          Length = 262

 Score = 54.1 bits (128), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 13/79 (16%), Positives = 25/79 (31%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
              E  +   G    ++        V               ++  NV+ + E  D+    
Sbjct: 178 FVNEAGLEPMGENLFRQTPASGDAIVGTPADPGFAQIKQNYLESSNVDPVKEITDLISAQ 237

Query: 109 RLYMANLQTIKQSHDMMTT 127
           R Y  N + I+ + +M  T
Sbjct: 238 RAYEMNSKIIQAADEMAAT 256



 Score = 44.5 bits (103), Expect = 0.005,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 21/40 (52%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          + +  IA +G+  Q   +++I+ NIAN  TTG       +
Sbjct: 1  MKALSIAATGMNAQQLNLEVIANNIANINTTGYKRARAEF 40


>gi|104782840|ref|YP_609338.1| flagellar basal body rod protein FlgG [Pseudomonas entomophila L48]
 gi|95111827|emb|CAK16551.1| Flagellar basal-body rod protein flgG [Pseudomonas entomophila L48]
          Length = 261

 Score = 54.1 bits (128), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 11/78 (14%), Positives = 25/78 (32%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +   G     +     +  +          +    ++  NV+ + E  +M  T 
Sbjct: 178 FINPAGLQAIGNNLFLETAASGAPQIGTPGLNGFGTSLQKTLENSNVSTVEELVNMITTQ 237

Query: 109 RLYMANLQTIKQSHDMMT 126
           R Y  N + I  +  M++
Sbjct: 238 RAYEMNSKVISAADKMLS 255



 Score = 41.8 bits (96), Expect = 0.028,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 23/42 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ +  +A +GL+ Q   + +IS N+AN  TTG       ++
Sbjct: 1  MLPALWVAKTGLSAQDTNLTVISNNLANVSTTGFKRDRAEFQ 42


>gi|57237057|ref|YP_178069.1| flagellar hook protein [Campylobacter jejuni RM1221]
 gi|88597731|ref|ZP_01100964.1| flagellar hook protein [Campylobacter jejuni subsp. jejuni 84-25]
 gi|205356434|ref|ZP_03223198.1| hypothetical protein Cj8421_0048 [Campylobacter jejuni subsp.
           jejuni CG8421]
 gi|218561735|ref|YP_002343514.1| flagellar hook protein [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|57165861|gb|AAW34640.1| flagellar hook protein [Campylobacter jejuni RM1221]
 gi|88190035|gb|EAQ94011.1| flagellar hook protein [Campylobacter jejuni subsp. jejuni 84-25]
 gi|112359441|emb|CAL34223.1| flagellar hook protein [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|205345621|gb|EDZ32260.1| hypothetical protein Cj8421_0048 [Campylobacter jejuni subsp.
           jejuni CG8421]
 gi|315929148|gb|EFV08373.1| flagella basal body rod family protein [Campylobacter jejuni subsp.
           jejuni 305]
          Length = 545

 Score = 54.1 bits (128), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 26/48 (54%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             G ++  NV++  E +++  T + + A+ ++I  S  M+   +++ R
Sbjct: 498 KGGFLEQSNVDLSAELSNLIVTQKAFDASSKSITTSDQMIQKAINMKR 545


>gi|315497881|ref|YP_004086685.1| flagellar basal-body rod protein flgg [Asticcacaulis excentricus CB
           48]
 gi|315415893|gb|ADU12534.1| flagellar basal-body rod protein FlgG [Asticcacaulis excentricus CB
           48]
          Length = 262

 Score = 54.1 bits (128), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 15/83 (18%), Positives = 28/83 (33%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
              E  +   G     + G   +  +             G  +  NV+ + E   +    
Sbjct: 178 FFNEAGLEAIGDNLYLQSGASGAPNIGTPGDVGYGTLMQGYTEASNVDAVSEITSLIVAQ 237

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y  N + IK + +M++ T  L
Sbjct: 238 RAYEMNSKIIKTADEMLSVTSSL 260



 Score = 41.0 bits (94), Expect = 0.050,   Method: Composition-based stats.
 Identities = 13/62 (20%), Positives = 22/62 (35%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          + +   A +G++ Q   +  IS NIAN  T G       ++       E M         
Sbjct: 1  MRALRTATTGMSAQQLNVDTISHNIANMNTVGFKKQRAEFQDLLYQNVERMGAQSSESGT 60

Query: 65 KI 66
           +
Sbjct: 61 VV 62


>gi|154249603|ref|YP_001410428.1| hypothetical protein Fnod_0921 [Fervidobacterium nodosum Rt17-B1]
 gi|154153539|gb|ABS60771.1| protein of unknown function DUF1078 domain protein
           [Fervidobacterium nodosum Rt17-B1]
          Length = 250

 Score = 54.1 bits (128), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 28/69 (40%)

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
             +KIG        +  P        G ++  NVNV+ E   M E +R Y A  + I   
Sbjct: 176 NPRKIGDTLFAGQPQNLPEDSFRILPGYIEKSNVNVVREMVKMIEAHRHYEATSKAIVVH 235

Query: 122 HDMMTTTLD 130
            +++   ++
Sbjct: 236 DELLNKVIN 244



 Score = 34.1 bits (76), Expect = 7.3,   Method: Composition-based stats.
 Identities = 14/92 (15%), Positives = 32/92 (34%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +    + A  G+ V   ++  +S N+AN  T G    +  ++       + +      R 
Sbjct: 1  MYRGVYTAAMGMLVDITKIDTLSNNLANVETNGYKADTPTFKAYFNKEIDRIKPEPENRR 60

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIVKYPNV 95
           ++    +              + GI++  NV
Sbjct: 61 VEVKKIGNLEQAVILDEVRTNFSQGILEQTNV 92


>gi|238751762|ref|ZP_04613250.1| Flagellar hook protein FlgE [Yersinia rohdei ATCC 43380]
 gi|238710033|gb|EEQ02263.1| Flagellar hook protein FlgE [Yersinia rohdei ATCC 43380]
          Length = 430

 Score = 54.1 bits (128), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 35/83 (42%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +  E +  +G    K+     S  +     G      SG ++  NV++  E  +M    
Sbjct: 347 FANPEGLSSAGDNVWKETQTSGSPILGIAGSGGFGTLTSGALESSNVDLSAELVNMIVAQ 406

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y +N QTIK    ++ T ++L
Sbjct: 407 RNYQSNAQTIKTQDQILQTLVNL 429



 Score = 34.8 bits (78), Expect = 4.3,   Method: Composition-based stats.
 Identities = 18/63 (28%), Positives = 25/63 (39%), Gaps = 4/63 (6%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
              A SGL   S+ + +I  NIAN+ T+G    S  +               GV+V  I
Sbjct: 2  GFSQAVSGLNAASSNLDVIGNNIANSATSGFKSSSVSFA----DMFAGSQAGMGVQVAGI 57

Query: 67 GVD 69
            D
Sbjct: 58 TQD 60


>gi|83718065|ref|YP_438389.1| flagellar hook protein flgE [Burkholderia thailandensis E264]
 gi|167614837|ref|ZP_02383472.1| flagellar hook protein flgE [Burkholderia thailandensis Bt4]
 gi|257141422|ref|ZP_05589684.1| flagellar hook protein flgE [Burkholderia thailandensis E264]
 gi|83651890|gb|ABC35954.1| flagellar hook protein flgE [Burkholderia thailandensis E264]
          Length = 395

 Score = 54.1 bits (128), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 18/41 (43%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           ++  N +V  E  DM    R Y AN + +   + MM   + 
Sbjct: 353 LELSNADVTKELVDMMSAQRNYQANSKVLSTENQMMQALMQ 393



 Score = 41.0 bits (94), Expect = 0.053,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 24/54 (44%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          S +IA SG+   ++++  IS NIANA T G   G   +       +      G 
Sbjct: 2  SFNIALSGINAINSQLNTISHNIANANTYGFKAGRANFATMVAGTQANGTYIGS 55


>gi|291529033|emb|CBK94619.1| fagellar hook-basal body proteins [Eubacterium rectale M104/1]
          Length = 477

 Score = 54.1 bits (128), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 23/44 (52%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  NV++  +  DM  T R + AN + I  S  ++   ++L R
Sbjct: 434 LEMSNVDLSSQFTDMIVTQRGFQANSRVITTSDTLLEELINLKR 477



 Score = 40.2 bits (92), Expect = 0.10,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 19/41 (46%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          ++ S + A SGL     RM +I  NIAN  T      S  +
Sbjct: 1  MMRSLYSAVSGLKTHQTRMDVIGNNIANVNTEAFKASSVRF 41


>gi|225181603|ref|ZP_03735044.1| protein of unknown function DUF1078 domain protein [Dethiobacter
           alkaliphilus AHT 1]
 gi|225167711|gb|EEG76521.1| protein of unknown function DUF1078 domain protein [Dethiobacter
           alkaliphilus AHT 1]
          Length = 408

 Score = 54.1 bits (128), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 33/85 (38%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
               E +  + G   +         V            +G ++  NV++  E  +M  T+
Sbjct: 324 FDNPEGLMKAAGNMYQVSSNSGQARVGGAGLEGRGVIETGTLEMSNVDLSYEFTEMITTS 383

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R + AN + I  S D++   ++L R
Sbjct: 384 RGFQANSRVITTSDDLLQEVVNLKR 408



 Score = 37.5 bits (85), Expect = 0.68,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 18/42 (42%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          +  S     SGL     +M +I  NIAN  TT    G   ++
Sbjct: 1  MQRSLFTGVSGLRNHQTKMDVIGNNIANVNTTAFKAGRVRFQ 42


>gi|126734127|ref|ZP_01749874.1| flagellar hook protein FlgE, putative [Roseobacter sp. CCS2]
 gi|126716993|gb|EBA13857.1| flagellar hook protein FlgE, putative [Roseobacter sp. CCS2]
          Length = 444

 Score = 54.1 bits (128), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 22/43 (51%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +    +V  E  ++ +T R Y +N + I+   +M+  T ++ R
Sbjct: 402 EESATDVAGELTELIQTQRAYSSNAKVIQTVDEMLQETTNIKR 444



 Score = 41.0 bits (94), Expect = 0.062,   Method: Composition-based stats.
 Identities = 20/91 (21%), Positives = 42/91 (46%), Gaps = 2/91 (2%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            + +S + + +GLA  + R+  IS+NI+N+ T G       ++   I   +  + +GGV
Sbjct: 1  MTISSSLNASVAGLAANATRLATISDNISNSSTYGYKRAVTDFQSMVIESGQGTYSAGGV 60

Query: 62 R--VKKIGVDQSTFVEEFDPGHPVANASGIV 90
          R    ++  ++   V   +P        G++
Sbjct: 61 RTTTSRLIDERGALVSTSNPTDLAVRGRGML 91


>gi|212634350|ref|YP_002310875.1| flagellar basal body rod protein FlgG [Shewanella piezotolerans
           WP3]
 gi|212555834|gb|ACJ28288.1| Flagellar basal-body rod protein FlgG [Shewanella piezotolerans
           WP3]
          Length = 262

 Score = 54.1 bits (128), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 15/82 (18%), Positives = 27/82 (32%)

Query: 45  RRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
                     +   G     + G   +            A   G ++  NVNV  E  ++
Sbjct: 175 AMSDFINPAGLDPMGQNLYMETGASGTPIQGTASLDGMGAIRQGALETSNVNVTEELVNL 234

Query: 105 RETNRLYMANLQTIKQSHDMMT 126
            E+ R+Y  N + I     M++
Sbjct: 235 IESQRIYEMNSKVISAVDQMLS 256



 Score = 38.7 bits (88), Expect = 0.25,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  +  I+ +GL  Q   + +IS N+ANA T G       +
Sbjct: 1  MHPALWISKTGLDAQQTDISVISNNVANASTVGFKKSRAVF 41


>gi|85706167|ref|ZP_01037262.1| flagellar basal-body rod protein FlgG [Roseovarius sp. 217]
 gi|85669331|gb|EAQ24197.1| flagellar basal-body rod protein FlgG [Roseovarius sp. 217]
          Length = 261

 Score = 54.1 bits (128), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 13/82 (15%), Positives = 27/82 (32%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            S  + +   G     +        V             G ++  +V+ + E  ++ E  
Sbjct: 178 FSNPKGLEAIGSNLFVETEASGPANVTTAGQDGLGTLRQGYLEDSSVDPVREITELIEAQ 237

Query: 109 RLYMANLQTIKQSHDMMTTTLD 130
           R Y  N + I  +  M++ T  
Sbjct: 238 RGYELNAKVITAADQMLSATTQ 259



 Score = 42.2 bits (97), Expect = 0.024,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 21/41 (51%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          +    IA +G+A Q  R++ IS N+AN  TTG       + 
Sbjct: 1  MHILKIAATGMAAQQMRVETISNNLANMSTTGYNARRAEFA 41


>gi|295097203|emb|CBK86293.1| fagellar hook-basal body proteins [Enterobacter cloacae subsp.
           cloacae NCTC 9394]
          Length = 404

 Score = 54.1 bits (128), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 29/68 (42%)

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
            +       F+     G        +++  NV++  E  +M    R Y +N QTIK   +
Sbjct: 336 SETPQSGQPFLGTSGSGSFGTINGNMLEQSNVDLGQEMVNMIVYQRNYQSNSQTIKTQSE 395

Query: 124 MMTTTLDL 131
           ++ T ++L
Sbjct: 396 LLQTLVNL 403



 Score = 34.1 bits (76), Expect = 7.5,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 19/39 (48%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          S     SGL   +  + ++  NIAN++T G   GS  + 
Sbjct: 2  SFSQGLSGLNAAAKALDVVGNNIANSQTAGFKAGSVAFA 40


>gi|225375330|ref|ZP_03752551.1| hypothetical protein ROSEINA2194_00955 [Roseburia inulinivorans DSM
           16841]
 gi|225212819|gb|EEG95173.1| hypothetical protein ROSEINA2194_00955 [Roseburia inulinivorans DSM
           16841]
          Length = 550

 Score = 53.7 bits (127), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 13/62 (20%), Positives = 26/62 (41%)

Query: 72  TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             +         +  +G ++  NV++  E   M  T R + AN + I  S  ++   ++L
Sbjct: 489 DGIGVEISADGSSMTTGELEMSNVDLSSEFTSMITTQRGFQANSRVITTSDTLLEELVNL 548

Query: 132 LR 133
            R
Sbjct: 549 KR 550



 Score = 40.2 bits (92), Expect = 0.084,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 19/41 (46%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          ++ S + A SGL     RM +I  NIAN  T      S  +
Sbjct: 1  MMRSMYSAVSGLKTHQTRMDVIGNNIANVNTVAFKSSSVTF 41


>gi|170758711|ref|YP_001787975.1| flagellar hook protein flgE [Clostridium botulinum A3 str. Loch
           Maree]
 gi|169405700|gb|ACA54111.1| flagellar hook protein flgE [Clostridium botulinum A3 str. Loch
           Maree]
          Length = 345

 Score = 53.7 bits (127), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 23/129 (17%), Positives = 44/129 (34%), Gaps = 5/129 (3%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           + S  I   GL V S      +     A  +    G           + +   S      
Sbjct: 222 VQSFSIDKDGLLVASLVNGKSAALGQVAMASFKNEGG-----LEKMGKNLYKNSANSGEA 276

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
            I   + T  E  +        +G+++  NV++  E  +M   NR + A  + I    ++
Sbjct: 277 IIRTPRGTAEENRNDKGYGDMLNGMIEMSNVDLAEEFTEMIVANRAFQACGKMITTGDEI 336

Query: 125 MTTTLDLLR 133
           +   ++L R
Sbjct: 337 LQELVNLKR 345



 Score = 39.1 bits (89), Expect = 0.21,   Method: Composition-based stats.
 Identities = 14/42 (33%), Positives = 22/42 (52%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S +   SGL  Q  ++ I+  NIANA TT     S  ++
Sbjct: 1  MLRSMYSGISGLKAQQTKLDIVGNNIANANTTAFKSQSIRFQ 42


>gi|153940778|ref|YP_001392018.1| flagellar hook-associated protein FlgK [Clostridium botulinum F
          str. Langeland]
 gi|152936674|gb|ABS42172.1| flagellar hook-associated protein FlgK [Clostridium botulinum F
          str. Langeland]
 gi|295320033|gb|ADG00411.1| flagellar hook-associated protein FlgK [Clostridium botulinum F
          str. 230613]
          Length = 621

 Score = 53.7 bits (127), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 28/78 (35%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  L  + +I  SG+  Q   +   S NIANA T G +      +      +  M+ + G
Sbjct: 1  MSGLFGTLNIGKSGMFAQQGALNTTSHNIANASTEGYSRQRVELQTTRPYCKPSMNSAAG 60

Query: 61 VRVKKIGVDQSTFVEEFD 78
                GV         D
Sbjct: 61 PGQVGTGVQIVAINRVRD 78



 Score = 38.7 bits (88), Expect = 0.26,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 20/41 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             V++  E A++ + N  Y AN + I     ++   ++ L+
Sbjct: 580 SGVSMDEEFANLVQFNHCYQANAKIISTVDQLLDVVINGLK 620


>gi|89095665|ref|ZP_01168559.1| flagellar basal-body rod protein [Bacillus sp. NRRL B-14911]
 gi|89089411|gb|EAR68518.1| flagellar basal-body rod protein [Bacillus sp. NRRL B-14911]
          Length = 279

 Score = 53.7 bits (127), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 23/133 (17%), Positives = 41/133 (30%), Gaps = 6/133 (4%)

Query: 7   SAHIANSGL---AVQSARMQIISE--NIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
                 SG+     Q  R+Q+ S+   ++NA       G         S         G 
Sbjct: 145 GFLTTASGMYVLDGQDNRIQLGSDRFTVSNAGQITGENGETAQLGFGFSENPAELIKEGD 204

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
            + +            +P    A   G ++  NV+      DM    R + AN + ++  
Sbjct: 205 GLFRTEDGAPLAEAVDNPEAGFALQQGFLESSNVDASRTMTDMMTAYRAFEANQKVLQAY 264

Query: 122 H-DMMTTTLDLLR 133
              M     ++ R
Sbjct: 265 DRSMEKMANEVGR 277



 Score = 34.8 bits (78), Expect = 3.7,   Method: Composition-based stats.
 Identities = 12/79 (15%), Positives = 29/79 (36%), Gaps = 3/79 (3%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +    +   SG+  Q  R ++++ N+AN+ T G               E ++  +G + +
Sbjct: 1  MFRGFYTVASGMLSQQRRTEMLTNNMANSNTPGFKADQ---SSMRAFPEMLLQSAGQLEI 57

Query: 64 KKIGVDQSTFVEEFDPGHP 82
                +    +E    + 
Sbjct: 58 PVQNRLKMPLNKEIGSINT 76


>gi|312147981|gb|ADQ30640.1| flagellar hook protein FlgE [Borrelia burgdorferi JD1]
          Length = 442

 Score = 53.7 bits (127), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 22/43 (51%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           ++  NV++  +  DM  T R + AN +TI  S  ++   + L 
Sbjct: 399 LEMANVDLAEQFTDMIVTQRGFQANAKTITTSDQLLQELVRLK 441



 Score = 40.6 bits (93), Expect = 0.065,   Method: Composition-based stats.
 Identities = 16/114 (14%), Positives = 31/114 (27%), Gaps = 23/114 (20%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           ++ S +   SGL     RM ++  NIAN  T G   G      +    + +     G   
Sbjct: 1   MMRSLYSGVSGLQNHQTRMDVVGNNIANVNTIGFKKG------RVNFQDMISQSISGASR 54

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
                  +   +     +  +                  D   T   + +  + 
Sbjct: 55  PTDARGGTNPKQVGLGMNVAS-----------------IDTIHTQGAFQSTQKA 91


>gi|261341494|ref|ZP_05969352.1| flagellar hook protein FlgE [Enterobacter cancerogenus ATCC 35316]
 gi|288316290|gb|EFC55228.1| flagellar hook protein FlgE [Enterobacter cancerogenus ATCC 35316]
          Length = 395

 Score = 53.7 bits (127), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 17/82 (20%), Positives = 27/82 (32%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            S    +    G    +     +  +     G   A  S  ++  NVN+  E   +    
Sbjct: 312 FSNPNGLSSQNGTTWTQTASSGAPLLGTPGTGLLGALTSNTLEGSNVNLTDELVGLMTAQ 371

Query: 109 RLYMANLQTIKQSHDMMTTTLD 130
           R Y AN + I  +  MMT    
Sbjct: 372 RNYQANTKVISTNDSMMTALFQ 393



 Score = 36.8 bits (83), Expect = 1.2,   Method: Composition-based stats.
 Identities = 15/39 (38%), Positives = 20/39 (51%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          S  IA SGL   + ++  IS NIAN+ T G   G   + 
Sbjct: 2  SFDIAISGLNAINEQLGAISNNIANSGTVGFKSGRAEFA 40


>gi|296534160|ref|ZP_06896654.1| flagellar basal-body rod protein FlgG [Roseomonas cervicalis ATCC
           49957]
 gi|296265515|gb|EFH11646.1| flagellar basal-body rod protein FlgG [Roseomonas cervicalis ATCC
           49957]
          Length = 262

 Score = 53.7 bits (127), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 17/115 (14%), Positives = 33/115 (28%)

Query: 17  VQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEE 76
            +   +    E +               +  T   E  +   G     +        +  
Sbjct: 146 ARDVTINATGEVLVKIDGQAALQNVGQLQLGTFPNEGGLEAIGDNMFLETPASGGVTLGN 205

Query: 77  FDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
                      G ++  NVNV+ E   +    R Y  N + I  S +M++T   +
Sbjct: 206 PGAAGYGQVLQGYLETSNVNVVQEITALITAQRAYEMNSKVITASDEMLSTLSRM 260



 Score = 41.0 bits (94), Expect = 0.060,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 22/41 (53%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          + S +IA +G+  Q   +++IS NIAN  TT        ++
Sbjct: 1  MRSLNIAGTGMMAQQTNVEVISNNIANMSTTAYKRRRAEFQ 41


>gi|297182937|gb|ADI19086.1| flagellar basal body rod protein [uncultured delta proteobacterium
           HF0070_15B21]
          Length = 258

 Score = 53.7 bits (127), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 15/86 (17%), Positives = 28/86 (32%), Gaps = 5/86 (5%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
               ++ +   G      I  D         P   +    GI++  NVN ++E + M   
Sbjct: 176 RFRNQDQLQKLGNHFYAPIRSDDVPI-----PSREIVVRQGILEQSNVNTVLEMSRMITA 230

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y    + I     +    + + R
Sbjct: 231 TRSYEMVQKAITNLDSLDEKAITISR 256


>gi|153940920|ref|YP_001391955.1| flagellar hook protein flgE [Clostridium botulinum F str.
           Langeland]
 gi|152936816|gb|ABS42314.1| flagellar hook protein flgE [Clostridium botulinum F str.
           Langeland]
 gi|295319974|gb|ADG00352.1| flagellar hook protein flgE [Clostridium botulinum F str. 230613]
          Length = 345

 Score = 53.7 bits (127), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 23/129 (17%), Positives = 44/129 (34%), Gaps = 5/129 (3%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           + S  I   GL V S      +     A  +    G           + +   S      
Sbjct: 222 VQSFSIDKDGLLVASLVNGKSAALGQVAMASFKNEGG-----LEKMGKNLYKNSANSGEA 276

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
            I   + T  E  +        +G+++  NV++  E  +M   NR + A  + I    ++
Sbjct: 277 IIRTPRGTAEENRNDKGYGDMLNGMIEMSNVDLAEEFTEMIVANRAFQACGKMITTGDEI 336

Query: 125 MTTTLDLLR 133
           +   ++L R
Sbjct: 337 LQELVNLKR 345



 Score = 39.1 bits (89), Expect = 0.22,   Method: Composition-based stats.
 Identities = 14/42 (33%), Positives = 22/42 (52%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S +   SGL  Q  ++ I+  NIANA TT     S  ++
Sbjct: 1  MLRSMYSGISGLKAQQTKLDIVGNNIANANTTAFKSQSIRFQ 42


>gi|77464904|ref|YP_354408.1| flagellar basal body rod protein FlgG [Rhodobacter sphaeroides
           2.4.1]
 gi|77389322|gb|ABA80507.1| putative flagellar basal body rod protein [Rhodobacter sphaeroides
           2.4.1]
          Length = 261

 Score = 53.7 bits (127), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 11/80 (13%), Positives = 26/80 (32%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            + E+ +   G     +                      G ++  +V+ + E  ++ +  
Sbjct: 178 FTNEKGLEAIGSNLFLETAASGPPIAGVAGEDGFGTLRQGYLEESSVDSVQEITELIKAQ 237

Query: 109 RLYMANLQTIKQSHDMMTTT 128
           R Y  N + I  +  M+  T
Sbjct: 238 RGYELNAKVITAADQMLAAT 257



 Score = 47.6 bits (111), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 22/41 (53%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          + +  IA +G++ Q  R+ +IS N+AN  TTG       + 
Sbjct: 1  MKALQIAATGMSAQQTRVDVISNNLANMSTTGYNARRADFA 41


>gi|86151187|ref|ZP_01069402.1| flagellar hook protein [Campylobacter jejuni subsp. jejuni 260.94]
 gi|85841534|gb|EAQ58781.1| flagellar hook protein [Campylobacter jejuni subsp. jejuni 260.94]
          Length = 545

 Score = 53.7 bits (127), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 26/48 (54%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             G ++  NV++  E +++  T + + A+ ++I  S  M+   +++ R
Sbjct: 498 KGGFLEQSNVDLSAELSNLIVTQKAFDASSKSITTSDQMIQKAINMKR 545


>gi|126463746|ref|YP_001044860.1| flagellar basal body rod protein FlgG [Rhodobacter sphaeroides ATCC
           17029]
 gi|126105410|gb|ABN78088.1| flagellar basal-body rod protein FlgG [Rhodobacter sphaeroides ATCC
           17029]
          Length = 261

 Score = 53.7 bits (127), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 11/80 (13%), Positives = 26/80 (32%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            + E+ +   G     +                      G ++  +V+ + E  ++ +  
Sbjct: 178 FTNEKGLEAIGSNLFLETAASGPPIGGVAGEDGFGTLRQGYLEESSVDSVQEITELIKAQ 237

Query: 109 RLYMANLQTIKQSHDMMTTT 128
           R Y  N + I  +  M+  T
Sbjct: 238 RGYELNAKVITAADQMLAAT 257



 Score = 47.6 bits (111), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 22/41 (53%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          + +  IA +G++ Q  R+ +IS N+AN  TTG       + 
Sbjct: 1  MKALQIAATGMSAQQTRVDVISNNLANMSTTGYNARRADFA 41


>gi|237752020|ref|ZP_04582500.1| flagellar hook protein flge [Helicobacter winghamensis ATCC
           BAA-430]
 gi|229376587|gb|EEO26678.1| flagellar hook protein flge [Helicobacter winghamensis ATCC
           BAA-430]
          Length = 764

 Score = 53.7 bits (127), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 9/52 (17%), Positives = 20/52 (38%)

Query: 82  PVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
                  +++  NV+      D+    R Y  + ++I  +  +M   + L R
Sbjct: 713 FGQVMDHMLETSNVDTGTALTDLIVYQRGYQMSAKSITTADQLMQEAIQLKR 764


>gi|218249383|ref|YP_002374806.1| flagellar hook protein FlgE [Borrelia burgdorferi ZS7]
 gi|218164571|gb|ACK74632.1| flagellar hook protein FlgE [Borrelia burgdorferi ZS7]
          Length = 442

 Score = 53.7 bits (127), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 22/43 (51%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           ++  NV++  +  DM  T R + AN +TI  S  ++   + L 
Sbjct: 399 LEMANVDLAEQFTDMIVTQRGFQANAKTITTSDQLLQELVRLK 441



 Score = 40.6 bits (93), Expect = 0.072,   Method: Composition-based stats.
 Identities = 16/114 (14%), Positives = 31/114 (27%), Gaps = 23/114 (20%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           ++ S +   SGL     RM ++  NIAN  T G   G      +    + +     G   
Sbjct: 1   MMRSLYSGVSGLQNHQTRMDVVGNNIANVNTIGFKKG------RVNFQDMISQSISGASR 54

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
                  +   +     +  +                  D   T   + +  + 
Sbjct: 55  PTDARGGTNPKQVGLGMNVAS-----------------IDTIHTQGAFQSTQKA 91


>gi|170741836|ref|YP_001770491.1| flagellar basal body rod protein FlgG [Methylobacterium sp. 4-46]
 gi|168196110|gb|ACA18057.1| flagellar basal-body rod protein FlgG [Methylobacterium sp. 4-46]
          Length = 262

 Score = 53.7 bits (127), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 12/98 (12%), Positives = 27/98 (27%)

Query: 30  ANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGI 89
           A                   + E  +   G    ++     +                G 
Sbjct: 159 AKVDGQATPQLLGQLSIANFANESGLEPLGNGLYRETAASGAPVTGVAGDTGFGKVQQGY 218

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
           ++  NV+ + E   +    R +  N + I+ + +M  T
Sbjct: 219 LESSNVDPVKEITSLITAQRAFEMNSKVIQAADEMAGT 256



 Score = 42.2 bits (97), Expect = 0.022,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 21/40 (52%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          + +  IA +G+  Q   +++I+ N+AN  TTG       +
Sbjct: 1  MRALAIAATGMNAQQLNLEVIANNVANLNTTGFKGARAEF 40


>gi|51598543|ref|YP_072731.1| flagellar hook protein FlgE [Borrelia garinii PBi]
 gi|51573114|gb|AAU07139.1| flagellar hook protein [Borrelia garinii PBi]
          Length = 442

 Score = 53.7 bits (127), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 22/43 (51%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           ++  NV++  +  DM  T R + AN +TI  S  ++   + L 
Sbjct: 399 LEMANVDLAEQFTDMIVTQRGFQANAKTITTSDQLLQELVRLK 441



 Score = 40.6 bits (93), Expect = 0.073,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 20/42 (47%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S +   SGL     RM ++  NIAN  T G   G   ++
Sbjct: 1  MMRSLYSGVSGLQNHQTRMDVVGNNIANVNTIGFKKGRVNFQ 42


>gi|1184296|gb|AAA87351.1| flagellar hook protein [Borrelia burgdorferi]
          Length = 442

 Score = 53.7 bits (127), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 22/43 (51%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           ++  NV++  +  DM  T R + AN +TI  S  ++   + L 
Sbjct: 399 LEMANVDLAEQFTDMIVTQRGFQANAKTITTSDQLLQELVRLK 441



 Score = 36.8 bits (83), Expect = 1.1,   Method: Composition-based stats.
 Identities = 15/114 (13%), Positives = 30/114 (26%), Gaps = 23/114 (20%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           ++ S +   SGL      M ++  NIAN  T G   G      +    + +     G   
Sbjct: 1   MMRSLYSGVSGLQNHQTIMDVVGNNIANVNTIGFKKG------RVNFQDMISQSISGASR 54

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
                  +   +     +  +                  D   T   + +  + 
Sbjct: 55  PTDARGGTNPKQVGLGMNVAS-----------------IDTIHTQGAFQSTQKA 91


>gi|312882657|ref|ZP_07742394.1| flagellar basal body rod protein FlgG [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309369618|gb|EFP97133.1| flagellar basal body rod protein FlgG [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 262

 Score = 53.7 bits (127), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 22/72 (30%)

Query: 55  MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
           +   G       G                     +++  NVNV  E  +M E  R+Y  N
Sbjct: 185 LEPIGQNLYLPTGASGDPQEGVPGFDGFGDVRQSMLETSNVNVTEELVNMIEAQRVYEMN 244

Query: 115 LQTIKQSHDMMT 126
            + I     MM 
Sbjct: 245 SKVISAVDKMMG 256



 Score = 40.2 bits (92), Expect = 0.087,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 19/41 (46%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  +  ++ +GL  Q   +  IS N+ANA T G       +
Sbjct: 1  MHPALWVSKTGLDAQQTNISTISNNLANASTVGFKKSRAVF 41


>gi|304404253|ref|ZP_07385915.1| fagellar hook-basal body protein [Paenibacillus curdlanolyticus
           YK9]
 gi|304347231|gb|EFM13063.1| fagellar hook-basal body protein [Paenibacillus curdlanolyticus
           YK9]
          Length = 272

 Score = 53.7 bits (127), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 23/44 (52%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  NV++  E  +M    R + AN + I  S +++   ++L R
Sbjct: 229 LEMSNVDLTSEFTEMIIAQRGFQANSRIITTSDEVLQEVVNLKR 272



 Score = 36.8 bits (83), Expect = 0.92,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 18/38 (47%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGS 41
          ++ S +   SG+     ++ +I  NIAN  T G   G 
Sbjct: 1  MLRSMYSGVSGMRGFQTKLDVIGNNIANVNTVGFKAGR 38


>gi|121607561|ref|YP_995368.1| flagellar basal body FlaE domain-containing protein
           [Verminephrobacter eiseniae EF01-2]
 gi|121552201|gb|ABM56350.1| flagellar basal body FlaE domain protein [Verminephrobacter
           eiseniae EF01-2]
          Length = 426

 Score = 53.7 bits (127), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 17/51 (33%), Positives = 28/51 (54%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  A  SG ++  NV++  E  +M    R Y AN QT+K    +M+T ++L
Sbjct: 375 NFGALRSGALEDSNVDLTAELVNMMTAQRTYQANAQTVKTQDQVMSTLVNL 425



 Score = 34.5 bits (77), Expect = 5.8,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 20/67 (29%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
                SGL   S  + +I  N+ANA T G   G   +     S      G        +
Sbjct: 2  GFQQGLSGLNAASKSLDVIGHNVANANTVGFKSGRAEFAEMVASAIGSADGLNAGIGVDV 61

Query: 67 GVDQSTF 73
                F
Sbjct: 62 AAVSQQF 68


>gi|323498418|ref|ZP_08103414.1| flagellar basal body rod protein FlgG [Vibrio sinaloensis DSM
           21326]
 gi|323316491|gb|EGA69506.1| flagellar basal body rod protein FlgG [Vibrio sinaloensis DSM
           21326]
          Length = 262

 Score = 53.7 bits (127), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 23/72 (31%)

Query: 55  MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
           +   G       G                     +++  NVNV  E  +M E  R+Y  N
Sbjct: 185 LEPIGQNLYLPTGASGDPQEGVPGFDGFGDIRQSMLETSNVNVTEELVNMIEAQRVYEMN 244

Query: 115 LQTIKQSHDMMT 126
            + I     MM+
Sbjct: 245 SKVISAVDKMMS 256



 Score = 40.6 bits (93), Expect = 0.070,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 19/41 (46%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  +  ++ +GL  Q   +  IS N+ANA T G       +
Sbjct: 1  MHPALWVSKTGLDAQQTNISTISNNLANASTVGYKKSRAVF 41


>gi|237751360|ref|ZP_04581840.1| flagellar hook protein FlgE [Helicobacter bilis ATCC 43879]
 gi|229372726|gb|EEO23117.1| flagellar hook protein FlgE [Helicobacter bilis ATCC 43879]
          Length = 600

 Score = 53.7 bits (127), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 21/47 (44%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G V+  NV+V     ++    R Y  N +    S D++   ++L R
Sbjct: 553 QGYVETSNVDVADALTNLILMQRGYSMNAKAFTTSDDLIKEAINLKR 599



 Score = 34.1 bits (76), Expect = 7.4,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 21/55 (38%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +  +   A SG+      +  IS NIAN  T G       ++       + M+ S
Sbjct: 1  MNDTMLNAVSGIKTHQFGLDSISNNIANVNTVGYKANDPEFKTLFSRSMDSMNAS 55


>gi|299531286|ref|ZP_07044696.1| flagellar hook protein FlgE [Comamonas testosteroni S44]
 gi|298720693|gb|EFI61640.1| flagellar hook protein FlgE [Comamonas testosteroni S44]
          Length = 422

 Score = 53.7 bits (127), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 21/103 (20%), Positives = 37/103 (35%)

Query: 29  IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASG 88
           I  + + G T           +  + +   G  +                 G   +  SG
Sbjct: 319 IVASYSNGVTRTEGQIALAAFTNTQGLGSIGNNKWVATSDSGPALNGSAQTGTFGSLQSG 378

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            ++  NV++  E  +M    R Y AN QTIK    + +T ++L
Sbjct: 379 ALEESNVDLTAELVNMMTAQRSYQANAQTIKTQDQVFSTLVNL 421



 Score = 37.5 bits (85), Expect = 0.66,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 35/124 (28%), Gaps = 7/124 (5%)

Query: 7   SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
                 SGL   S  + +I  NIAN+ TTG       +     S      G        +
Sbjct: 2   GFQQGLSGLNAASKNLDVIGHNIANSNTTGFKASRADFAEMVASAIGSASGQSSGIGVNV 61

Query: 67  GVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRL------YMANLQTIKQ 120
                 F +         N    +      V+ ++       R          NL+T+  
Sbjct: 62  ASVSQQFRQGSI-TSTGNNLDIAINGNGFFVVKQSDGSIAYTRAGNFGLDKEGNLKTVDN 120

Query: 121 SHDM 124
            + M
Sbjct: 121 DNVM 124


>gi|15642194|ref|NP_231826.1| flagellar basal body rod protein FlgG [Vibrio cholerae O1 biovar El
           Tor str. N16961]
 gi|121586257|ref|ZP_01676047.1| flagellar basal-body rod protein FlgG [Vibrio cholerae 2740-80]
 gi|121726538|ref|ZP_01679787.1| flagellar basal-body rod protein FlgG [Vibrio cholerae V52]
 gi|147674573|ref|YP_001217712.1| flagellar basal body rod protein FlgG [Vibrio cholerae O395]
 gi|153213600|ref|ZP_01948873.1| flagellar basal-body rod protein FlgG [Vibrio cholerae 1587]
 gi|153817095|ref|ZP_01969762.1| flagellar basal-body rod protein FlgG [Vibrio cholerae NCTC 8457]
 gi|153820850|ref|ZP_01973517.1| flagellar basal-body rod protein FlgG [Vibrio cholerae B33]
 gi|153825330|ref|ZP_01977997.1| flagellar basal-body rod protein FlgG [Vibrio cholerae MZO-2]
 gi|153829351|ref|ZP_01982018.1| flagellar basal-body rod protein FlgG [Vibrio cholerae 623-39]
 gi|183179567|ref|ZP_02957778.1| flagellar basal-body rod protein FlgG [Vibrio cholerae MZO-3]
 gi|227082319|ref|YP_002810870.1| flagellar basal-body rod protein FlgG [Vibrio cholerae M66-2]
 gi|229507728|ref|ZP_04397233.1| flagellar basal-body rod protein FlgG [Vibrio cholerae BX 330286]
 gi|229512077|ref|ZP_04401556.1| flagellar basal-body rod protein FlgG [Vibrio cholerae B33]
 gi|229513839|ref|ZP_04403301.1| flagellar basal-body rod protein FlgG [Vibrio cholerae TMA 21]
 gi|229519213|ref|ZP_04408656.1| flagellar basal-body rod protein FlgG [Vibrio cholerae RC9]
 gi|229522144|ref|ZP_04411561.1| flagellar basal-body rod protein FlgG [Vibrio cholerae TM 11079-80]
 gi|229524190|ref|ZP_04413595.1| flagellar basal-body rod protein FlgG [Vibrio cholerae bv. albensis
           VL426]
 gi|229528800|ref|ZP_04418190.1| flagellar basal-body rod protein FlgG [Vibrio cholerae 12129(1)]
 gi|229607232|ref|YP_002877880.1| flagellar basal body rod protein FlgG [Vibrio cholerae MJ-1236]
 gi|254225803|ref|ZP_04919408.1| flagellar basal-body rod protein FlgG [Vibrio cholerae V51]
 gi|254849324|ref|ZP_05238674.1| flagellar basal-body rod protein FlgG [Vibrio cholerae MO10]
 gi|255747106|ref|ZP_05421051.1| flagellar basal-body rod protein FlgG [Vibrio cholera CIRS 101]
 gi|262161350|ref|ZP_06030460.1| flagellar basal-body rod protein FlgG [Vibrio cholerae INDRE 91/1]
 gi|262167779|ref|ZP_06035481.1| flagellar basal-body rod protein FlgG [Vibrio cholerae RC27]
 gi|262191687|ref|ZP_06049863.1| flagellar basal-body rod protein FlgG [Vibrio cholerae CT 5369-93]
 gi|297580841|ref|ZP_06942766.1| flagellar basal-body rod protein FlgG [Vibrio cholerae RC385]
 gi|298500427|ref|ZP_07010232.1| flagellar basal-body rod protein FlgG [Vibrio cholerae MAK 757]
 gi|9656751|gb|AAF95340.1| flagellar basal-body rod protein FlgG [Vibrio cholerae O1 biovar El
           Tor str. N16961]
 gi|121549523|gb|EAX59549.1| flagellar basal-body rod protein FlgG [Vibrio cholerae 2740-80]
 gi|121630991|gb|EAX63370.1| flagellar basal-body rod protein FlgG [Vibrio cholerae V52]
 gi|124115799|gb|EAY34619.1| flagellar basal-body rod protein FlgG [Vibrio cholerae 1587]
 gi|125621709|gb|EAZ50038.1| flagellar basal-body rod protein FlgG [Vibrio cholerae V51]
 gi|126512363|gb|EAZ74957.1| flagellar basal-body rod protein FlgG [Vibrio cholerae NCTC 8457]
 gi|126521642|gb|EAZ78865.1| flagellar basal-body rod protein FlgG [Vibrio cholerae B33]
 gi|146316456|gb|ABQ20995.1| flagellar basal-body rod protein FlgG [Vibrio cholerae O395]
 gi|148875192|gb|EDL73327.1| flagellar basal-body rod protein FlgG [Vibrio cholerae 623-39]
 gi|149741014|gb|EDM55083.1| flagellar basal-body rod protein FlgG [Vibrio cholerae MZO-2]
 gi|183012978|gb|EDT88278.1| flagellar basal-body rod protein FlgG [Vibrio cholerae MZO-3]
 gi|227010207|gb|ACP06419.1| flagellar basal-body rod protein FlgG [Vibrio cholerae M66-2]
 gi|227014091|gb|ACP10301.1| flagellar basal-body rod protein FlgG [Vibrio cholerae O395]
 gi|229332574|gb|EEN98060.1| flagellar basal-body rod protein FlgG [Vibrio cholerae 12129(1)]
 gi|229337771|gb|EEO02788.1| flagellar basal-body rod protein FlgG [Vibrio cholerae bv. albensis
           VL426]
 gi|229341069|gb|EEO06074.1| flagellar basal-body rod protein FlgG [Vibrio cholerae TM 11079-80]
 gi|229343902|gb|EEO08877.1| flagellar basal-body rod protein FlgG [Vibrio cholerae RC9]
 gi|229349020|gb|EEO13977.1| flagellar basal-body rod protein FlgG [Vibrio cholerae TMA 21]
 gi|229352042|gb|EEO16983.1| flagellar basal-body rod protein FlgG [Vibrio cholerae B33]
 gi|229355233|gb|EEO20154.1| flagellar basal-body rod protein FlgG [Vibrio cholerae BX 330286]
 gi|229369887|gb|ACQ60310.1| flagellar basal-body rod protein FlgG [Vibrio cholerae MJ-1236]
 gi|254845029|gb|EET23443.1| flagellar basal-body rod protein FlgG [Vibrio cholerae MO10]
 gi|255735508|gb|EET90908.1| flagellar basal-body rod protein FlgG [Vibrio cholera CIRS 101]
 gi|262023844|gb|EEY42543.1| flagellar basal-body rod protein FlgG [Vibrio cholerae RC27]
 gi|262028661|gb|EEY47315.1| flagellar basal-body rod protein FlgG [Vibrio cholerae INDRE 91/1]
 gi|262032426|gb|EEY50988.1| flagellar basal-body rod protein FlgG [Vibrio cholerae CT 5369-93]
 gi|297534667|gb|EFH73503.1| flagellar basal-body rod protein FlgG [Vibrio cholerae RC385]
 gi|297541120|gb|EFH77174.1| flagellar basal-body rod protein FlgG [Vibrio cholerae MAK 757]
 gi|327484714|gb|AEA79121.1| Flagellar basal-body rod protein FlgG [Vibrio cholerae LMA3894-4]
          Length = 262

 Score = 53.7 bits (127), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 23/72 (31%)

Query: 55  MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
           +   G       G                     +++  NVNV  E  +M E  R+Y  N
Sbjct: 185 LEPVGQNLYLPTGASGEPQEGVPGLDGLGDIRQSMLETSNVNVTEELVNMIEAQRVYEMN 244

Query: 115 LQTIKQSHDMMT 126
            + I     MM+
Sbjct: 245 SKVISAVDKMMS 256



 Score = 41.0 bits (94), Expect = 0.056,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  +  ++ +GL  Q   +  IS N+ANA T G   G   +
Sbjct: 1  MQPALWVSKTGLDAQQTNIATISNNLANASTIGFKKGRAVF 41


>gi|322380221|ref|ZP_08054447.1| flagellar hook protein FlgE [Helicobacter suis HS5]
 gi|321147348|gb|EFX42022.1| flagellar hook protein FlgE [Helicobacter suis HS5]
          Length = 619

 Score = 53.7 bits (127), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 12/85 (14%), Positives = 32/85 (37%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            + +  +   GG    +        +   + G     +   ++  NV++     ++    
Sbjct: 535 FANDAGLQADGGSVFSETSNSGKALIGAANTGRRGGVSGSKLESSNVDLSRSLTNLIVVQ 594

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R + AN + +  S  ++ T L+L +
Sbjct: 595 RGFQANSKAVTTSDQILNTLLNLKQ 619


>gi|283850852|ref|ZP_06368138.1| protein of unknown function DUF1078 [Desulfovibrio sp. FW1012B]
 gi|283573775|gb|EFC21749.1| protein of unknown function DUF1078 [Desulfovibrio sp. FW1012B]
          Length = 551

 Score = 53.7 bits (127), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 15/85 (17%), Positives = 30/85 (35%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +  + +   G                  + G   + +   ++  NV++  E   M  T 
Sbjct: 467 FTNLQGLSREGSNLYAATLESGQGTTNRANTGSVGSISGNTLESSNVDMATEMVSMILTQ 526

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R + AN +TI     M++  + L R
Sbjct: 527 RGFEANSKTITTVDSMLSEVIQLKR 551



 Score = 34.1 bits (76), Expect = 6.9,   Method: Composition-based stats.
 Identities = 20/86 (23%), Positives = 25/86 (29%), Gaps = 4/86 (4%)

Query: 3  YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY----RRKTISFEEVMHGS 58
           L  S     SGL   S +M  I  N+AN  T G       +         +        
Sbjct: 4  GLGTSMWSGVSGLLANSTKMSTIGNNLANVNTVGFKGARTDFMDLMSANIGTAAGDKQIG 63

Query: 59 GGVRVKKIGVDQSTFVEEFDPGHPVA 84
           GVRV  +  D S    E        
Sbjct: 64 RGVRVGTVVSDYSQGGLETTSNSLDM 89


>gi|260774940|ref|ZP_05883841.1| flagellar basal-body rod protein FlgG [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260609195|gb|EEX35353.1| flagellar basal-body rod protein FlgG [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 262

 Score = 53.7 bits (127), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 23/78 (29%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +   G       G                     +++  NVNV  E  +M E  
Sbjct: 179 FVNPGGLEPIGQNLYLPTGASGDPQEGVPGFDGFGDIRQSMLETSNVNVTEELVNMIEAQ 238

Query: 109 RLYMANLQTIKQSHDMMT 126
           R+Y  N + I     MM+
Sbjct: 239 RVYEMNSKVISAVDKMMS 256



 Score = 40.6 bits (93), Expect = 0.074,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 19/41 (46%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  +  ++ +GL  Q   +  IS N+ANA T G       +
Sbjct: 1  MHPALWVSKTGLDAQQTNISTISNNLANASTVGYKKSRAVF 41


>gi|74317652|ref|YP_315392.1| flagellar hook protein FlgE [Thiobacillus denitrificans ATCC 25259]
 gi|74057147|gb|AAZ97587.1| flagellar hook protein FlgE [Thiobacillus denitrificans ATCC 25259]
          Length = 405

 Score = 53.7 bits (127), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 33/83 (39%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +    +   G     +     +  V   D G      S  V+  NV++  E  +M    
Sbjct: 322 FANPNGLQQMGNNLWTETATSGTPLVGTPDSGGLGVLQSSAVEDSNVDLTAELVNMITAQ 381

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R+Y AN QTIK    ++ T ++L
Sbjct: 382 RVYQANAQTIKSQDAVLQTLVNL 404


>gi|42526517|ref|NP_971615.1| flagellar basal-body rod protein FlgG [Treponema denticola ATCC
           35405]
 gi|41816710|gb|AAS11496.1| flagellar basal-body rod protein FlgG [Treponema denticola ATCC
           35405]
          Length = 270

 Score = 53.7 bits (127), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 16/42 (38%), Positives = 22/42 (52%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
            G ++  NVNV+ E   M E NR Y AN ++I+    MM   
Sbjct: 222 QGFIEASNVNVVNEMVRMIEVNRAYEANQKSIQAEDTMMAKL 263



 Score = 41.0 bits (94), Expect = 0.054,   Method: Composition-based stats.
 Identities = 13/71 (18%), Positives = 28/71 (39%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++   + A SG+  Q  ++ +IS N+AN  TT         +         ++  G ++ 
Sbjct: 1  MVRGWYTAASGMLAQQRQLDVISNNLANLDTTSFKRDVSVQKSFPELLLRRLNDDGVIKN 60

Query: 64 KKIGVDQSTFV 74
               D +  +
Sbjct: 61 PFGSSDIAPII 71


>gi|195941363|ref|ZP_03086745.1| flagellar hook protein FlgE [Borrelia burgdorferi 80a]
 gi|221217779|ref|ZP_03589247.1| flagellar hook protein FlgE [Borrelia burgdorferi 72a]
 gi|224533707|ref|ZP_03674295.1| flagellar hook protein FlgE [Borrelia burgdorferi CA-11.2a]
 gi|225549062|ref|ZP_03770037.1| flagellar hook protein FlgE [Borrelia burgdorferi 94a]
 gi|225550122|ref|ZP_03771082.1| flagellar hook protein FlgE [Borrelia burgdorferi 118a]
 gi|226320584|ref|ZP_03796144.1| flagellar hook protein FlgE [Borrelia burgdorferi 29805]
 gi|221192456|gb|EEE18675.1| flagellar hook protein FlgE [Borrelia burgdorferi 72a]
 gi|224513000|gb|EEF83363.1| flagellar hook protein FlgE [Borrelia burgdorferi CA-11.2a]
 gi|225369234|gb|EEG98687.1| flagellar hook protein FlgE [Borrelia burgdorferi 118a]
 gi|225370288|gb|EEG99726.1| flagellar hook protein FlgE [Borrelia burgdorferi 94a]
 gi|226234003|gb|EEH32724.1| flagellar hook protein FlgE [Borrelia burgdorferi 29805]
          Length = 442

 Score = 53.7 bits (127), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 22/43 (51%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           ++  NV++  +  DM  T R + AN +TI  S  ++   + L 
Sbjct: 399 LEMANVDLAEQFTDMIVTQRGFQANAKTITTSDQLLQELVRLK 441



 Score = 40.6 bits (93), Expect = 0.075,   Method: Composition-based stats.
 Identities = 16/114 (14%), Positives = 31/114 (27%), Gaps = 23/114 (20%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           ++ S +   SGL     RM ++  NIAN  T G   G      +    + +     G   
Sbjct: 1   MMRSLYSGVSGLQNHQTRMDVVGNNIANVNTIGFKKG------RVNFQDMISQSISGASR 54

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
                  +   +     +  +                  D   T   + +  + 
Sbjct: 55  PTDARGGTNPKQVGLGMNVAS-----------------IDTIHTQGAFQSTQKA 91


>gi|119477953|ref|ZP_01618053.1| flagellar hook protein [marine gamma proteobacterium HTCC2143]
 gi|119448866|gb|EAW30108.1| flagellar hook protein [marine gamma proteobacterium HTCC2143]
          Length = 429

 Score = 53.7 bits (127), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 15/83 (18%), Positives = 33/83 (39%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            S E+ ++  G     +        V     G+     SG ++  NV++  E   +    
Sbjct: 346 FSNEQGLNPLGETGWAQSFESGEPVVGAPLTGNLGGIQSGALEESNVDLSEELVRLIIAQ 405

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R + AN +TI+ +  +    +++
Sbjct: 406 RNFQANAKTIETADTVTQAIINI 428



 Score = 34.1 bits (76), Expect = 6.2,   Method: Composition-based stats.
 Identities = 12/38 (31%), Positives = 18/38 (47%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          S + A SGL   +  +++   NIANA T G       +
Sbjct: 2  SFNTALSGLRAANTDLEVSGNNIANASTIGFKRSRAEF 39


>gi|42522134|ref|NP_967514.1| flagellar basal-body rod protein FlgG [Bdellovibrio bacteriovorus
           HD100]
 gi|39574665|emb|CAE78507.1| flagellar basal-body rod protein FlgG [Bdellovibrio bacteriovorus
           HD100]
          Length = 261

 Score = 53.7 bits (127), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 18/97 (18%), Positives = 35/97 (36%), Gaps = 5/97 (5%)

Query: 40  GSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV-----KYPN 94
              P     I     ++ +G   + K    Q+    +     P  N +G +     +  N
Sbjct: 164 NDVPQTIGQIDVVNFVNPAGLKAMGKNLFTQTPSSGQAIASRPGLNGTGYLAQGQLESSN 223

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           VN++ E  +M    R    N + ++ S  M+    +L
Sbjct: 224 VNIVDEMVNMITAQRAMETNSKVMQASDQMLQAINNL 260



 Score = 44.1 bits (102), Expect = 0.006,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 25/57 (43%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          ++ S + A +G+A Q   M +I+ NIAN  T G       +       ++    + G
Sbjct: 1  MLKSLNTAATGMAAQQTNMDVIANNIANVSTAGFKRSRAEFEDLMYQTQKEPGTASG 57


>gi|325473455|gb|EGC76650.1| flagellar basal-body rod protein FlgG [Treponema denticola F0402]
          Length = 270

 Score = 53.7 bits (127), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 16/42 (38%), Positives = 22/42 (52%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
            G ++  NVNV+ E   M E NR Y AN ++I+    MM   
Sbjct: 222 QGFIEASNVNVVNEMVRMIEVNRAYEANQKSIQAEDTMMAKL 263



 Score = 41.0 bits (94), Expect = 0.059,   Method: Composition-based stats.
 Identities = 13/71 (18%), Positives = 28/71 (39%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++   + A SG+  Q  ++ +IS N+AN  TT         +         ++  G ++ 
Sbjct: 1  MVRGWYTAASGMLAQQRQLDVISNNLANLDTTSFKRDVSVQKSFPELLLRRLNDDGVIKN 60

Query: 64 KKIGVDQSTFV 74
               D +  +
Sbjct: 61 PFGSSDIAPII 71


>gi|224533123|ref|ZP_03673723.1| flagellar hook protein FlgE [Borrelia burgdorferi WI91-23]
 gi|224511850|gb|EEF82251.1| flagellar hook protein FlgE [Borrelia burgdorferi WI91-23]
 gi|312149691|gb|ADQ29762.1| flagellar hook protein FlgE [Borrelia burgdorferi N40]
          Length = 442

 Score = 53.7 bits (127), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 22/43 (51%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           ++  NV++  +  DM  T R + AN +TI  S  ++   + L 
Sbjct: 399 LEMANVDLAEQFTDMIVTQRGFQANAKTITTSDQLLQELVRLK 441



 Score = 40.6 bits (93), Expect = 0.075,   Method: Composition-based stats.
 Identities = 16/114 (14%), Positives = 31/114 (27%), Gaps = 23/114 (20%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           ++ S +   SGL     RM ++  NIAN  T G   G      +    + +     G   
Sbjct: 1   MMRSLYSGVSGLQNHQTRMDVVGNNIANVNTIGFKKG------RVNFQDMISQSISGASR 54

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
                  +   +     +  +                  D   T   + +  + 
Sbjct: 55  PTDARGGTNPKQVGLGMNVAS-----------------IDTIHTQGAFQSTQKA 91


>gi|110677963|ref|YP_680970.1| flagellar hook protein FlgE, putative [Roseobacter denitrificans
           OCh 114]
 gi|109454079|gb|ABG30284.1| flagellar hook protein FlgE, putative [Roseobacter denitrificans
           OCh 114]
          Length = 436

 Score = 53.7 bits (127), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 22/43 (51%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +    +V  E  DM +T R Y +N + I+   +M+  T ++ R
Sbjct: 394 EESTTDVAGELTDMIKTQRAYSSNAKVIQTVDEMLQETTNIKR 436



 Score = 33.7 bits (75), Expect = 8.8,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 40/106 (37%), Gaps = 4/106 (3%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             + +S +   +GL   S R+  IS+NIAN+ T G       +    +S     + +GGV
Sbjct: 1   MSISSSLNAGVAGLQTNSQRLASISDNIANSSTFGYKRVQTDFESMVLSSGGGAYAAGGV 60

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
           R       Q    E         +    V+   +  + + A ++  
Sbjct: 61  RANT----QRLIDERGTLVSTSNSTDLAVRGGGMLPVAQAAQVQTA 102


>gi|119714998|ref|YP_921963.1| hypothetical protein Noca_0751 [Nocardioides sp. JS614]
 gi|119535659|gb|ABL80276.1| protein of unknown function DUF1078 domain protein [Nocardioides
           sp. JS614]
          Length = 282

 Score = 53.7 bits (127), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 13/85 (15%), Positives = 31/85 (36%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +    +  +G              +     G   A + G V+  NV++  E  ++    
Sbjct: 198 FNNPMGLARAGETSFTTTANSGVAELGVSGEGSRGALSPGSVEMSNVDLAAEFTNLILAQ 257

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R + A+ + I  S  ++   +++ R
Sbjct: 258 RGFQASSRVITTSDQVLEDLVNIKR 282



 Score = 33.7 bits (75), Expect = 8.3,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 19/42 (45%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S     SGL V    + +   NIANA T G    S  ++
Sbjct: 1  MLRSLFAGISGLRVNQTMLDVTGNNIANANTIGFKSSSTVFQ 42


>gi|303248690|ref|ZP_07334944.1| fagellar hook-basal body protein [Desulfovibrio fructosovorans JJ]
 gi|302489946|gb|EFL49872.1| fagellar hook-basal body protein [Desulfovibrio fructosovorans JJ]
          Length = 549

 Score = 53.7 bits (127), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 14/85 (16%), Positives = 31/85 (36%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +  + ++ +G                  + G   + +   ++  NV++  E   M  T 
Sbjct: 465 FTNLQGLNNAGNSLYTATLESGEGTTNRPNSGSVGSISGNTLESSNVDMAAEMVSMIVTQ 524

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R +  N +TI     M++  + L R
Sbjct: 525 RGFEGNSKTITTVDTMLSEIIQLKR 549



 Score = 36.4 bits (82), Expect = 1.4,   Method: Composition-based stats.
 Identities = 20/86 (23%), Positives = 27/86 (31%), Gaps = 4/86 (4%)

Query: 3  YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY----RRKTISFEEVMHGS 58
           L  +     SGL   S +M  I  N+AN  T G       +         +   V    
Sbjct: 4  GLNTAMWSGVSGLMANSTKMTSIGNNLANVNTYGFKSARTDFVTLMSATIGTASGVDQVG 63

Query: 59 GGVRVKKIGVDQSTFVEEFDPGHPVA 84
           GVRV  +  D S    E    +   
Sbjct: 64 RGVRVGSVVTDYSQGGLEITGTNTDM 89


>gi|290474972|ref|YP_003467856.1| flagellar hook protein [Xenorhabdus bovienii SS-2004]
 gi|289174289|emb|CBJ81079.1| flagellar biosynthesis; hook protein [Xenorhabdus bovienii SS-2004]
          Length = 416

 Score = 53.7 bits (127), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 21/83 (25%), Positives = 34/83 (40%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            S  E +   G     + G   S  V     G+     SG ++  NV++  E  +M    
Sbjct: 333 FSNPEGLAAQGDNVWVETGASGSPIVGTAGSGNFGKLISGALEASNVDMSQELVNMIVAQ 392

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y +N QTIK    ++ T + +
Sbjct: 393 RNYQSNAQTIKTQDQILQTLVSM 415



 Score = 34.1 bits (76), Expect = 7.2,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 19/39 (48%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          +   A SGL   ++ + +I  NIAN+ T G    S  + 
Sbjct: 2  AFSQAVSGLNAAASNLDVIGNNIANSATFGFKSSSAAFA 40


>gi|260886641|ref|ZP_05897904.1| flagellar hook protein FlgE [Selenomonas sputigena ATCC 35185]
 gi|330839527|ref|YP_004414107.1| flagellar hook-basal body protein [Selenomonas sputigena ATCC
           35185]
 gi|260863784|gb|EEX78284.1| flagellar hook protein FlgE [Selenomonas sputigena ATCC 35185]
 gi|329747291|gb|AEC00648.1| flagellar hook-basal body protein [Selenomonas sputigena ATCC
           35185]
          Length = 496

 Score = 53.7 bits (127), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 25/48 (52%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
               ++  NV+V  E ADM  T R + +N + I    +M+ T +++ R
Sbjct: 449 TPSALEMSNVDVANEFADMVVTQRGFQSNSKVITVGDEMLETVINMKR 496



 Score = 40.2 bits (92), Expect = 0.082,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 19/57 (33%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          ++ S     SGL     RM +I  NIAN  T G       +       +       G
Sbjct: 1  MMRSLFSGVSGLKSHQTRMDVIGNNIANVNTIGFKSSRVTFADTLYQTQSGAAAPTG 57


>gi|219684598|ref|ZP_03539541.1| flagellar hook protein FlgE [Borrelia garinii PBr]
 gi|219671960|gb|EED29014.1| flagellar hook protein FlgE [Borrelia garinii PBr]
          Length = 442

 Score = 53.7 bits (127), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 22/43 (51%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           ++  NV++  +  DM  T R + AN +TI  S  ++   + L 
Sbjct: 399 LEMANVDLAEQFTDMIVTQRGFQANAKTITTSDQLLQELVRLK 441



 Score = 40.6 bits (93), Expect = 0.077,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 20/42 (47%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S +   SGL     RM ++  NIAN  T G   G   ++
Sbjct: 1  MMRSLYSGVSGLQNHQTRMDVVGNNIANVNTIGFKKGRVNFQ 42


>gi|77918753|ref|YP_356568.1| flagellar hook-associated protein [Pelobacter carbinolicus DSM
           2380]
 gi|77544836|gb|ABA88398.1| flagellar hook-associated protein [Pelobacter carbinolicus DSM
           2380]
          Length = 464

 Score = 53.7 bits (127), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 24/143 (16%), Positives = 47/143 (32%), Gaps = 15/143 (10%)

Query: 5   IASAHIAN-----SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH--G 57
             S  I+      SG A         S  +A  +++     ++      +   + M    
Sbjct: 323 FFSLSISGGADPWSGAAAGIEVALTASNQVAAGQSSAVGDNTNALLMTELKNAKTMDGAH 382

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPN-------VNVLVETADMRETNRL 110
           S G    KI  D        +          +++  N       V++  E  ++ +  R 
Sbjct: 383 SFGTFYAKIASDIG-LESAQNQLSVTGLEDTMLQLENLRDSKVGVSLEEEMINLIQYQRG 441

Query: 111 YMANLQTIKQSHDMMTTTLDLLR 133
           + A+ + +    +MM T L L R
Sbjct: 442 FEASAKLLTTVDEMMDTVLSLKR 464



 Score = 39.1 bits (89), Expect = 0.21,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 24/73 (32%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  L  + ++  + LA     + +   NIAN  T G +  S                  G
Sbjct: 1  MSGLTDALNLGKTSLATHQTLLDVTGNNIANVNTDGYSRQSVDLGTVPALNFRGFQIGRG 60

Query: 61 VRVKKIGVDQSTF 73
          V    I   + TF
Sbjct: 61 VTANNIQRAEDTF 73


>gi|221069322|ref|ZP_03545427.1| flagellar basal body FlaE domain protein [Comamonas testosteroni
           KF-1]
 gi|220714345|gb|EED69713.1| flagellar basal body FlaE domain protein [Comamonas testosteroni
           KF-1]
          Length = 422

 Score = 53.7 bits (127), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 21/103 (20%), Positives = 37/103 (35%)

Query: 29  IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASG 88
           I  + + G T           +  + +   G  +                 G   +  SG
Sbjct: 319 IVASYSNGVTRTEGQIALAAFTNTQGLGSIGNNKWVATSDSGPALNGSAQTGTFGSLQSG 378

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            ++  NV++  E  +M    R Y AN QTIK    + +T ++L
Sbjct: 379 ALEESNVDLTAELVNMMTAQRSYQANAQTIKTQDQVFSTLVNL 421



 Score = 34.8 bits (78), Expect = 3.5,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 35/124 (28%), Gaps = 7/124 (5%)

Query: 7   SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
                 SGL   S  + +I  NIAN+ TTG       +     S      G        +
Sbjct: 2   GFQQGLSGLNAASKNLDVIGHNIANSSTTGFKASRADFAEMIASAIGSASGQSSGIGVNV 61

Query: 67  GVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRL------YMANLQTIKQ 120
                 F +         N    +      V+ ++       R          NL+T+  
Sbjct: 62  AAVSQQFRQGSI-TSTGNNLDLAINGNGFFVVKQSDGSIAYTRAGNFGLDKEGNLKTVDN 120

Query: 121 SHDM 124
            + M
Sbjct: 121 DNVM 124


>gi|15594628|ref|NP_212417.1| flagellar hook protein FlgE [Borrelia burgdorferi B31]
 gi|223889009|ref|ZP_03623600.1| flagellar hook protein FlgE [Borrelia burgdorferi 64b]
 gi|226321601|ref|ZP_03797127.1| flagellar hook protein FlgE [Borrelia burgdorferi Bol26]
 gi|2494528|sp|Q44767|FLGE_BORBU RecName: Full=Flagellar hook protein flgE
 gi|1165267|gb|AAA85606.1| FlgE [Borrelia burgdorferi]
 gi|2688183|gb|AAC66665.1| flagellar hook protein (flgE) [Borrelia burgdorferi B31]
 gi|223885825|gb|EEF56924.1| flagellar hook protein FlgE [Borrelia burgdorferi 64b]
 gi|226232790|gb|EEH31543.1| flagellar hook protein FlgE [Borrelia burgdorferi Bol26]
          Length = 442

 Score = 53.7 bits (127), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 22/43 (51%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           ++  NV++  +  DM  T R + AN +TI  S  ++   + L 
Sbjct: 399 LEMANVDLAEQFTDMIVTQRGFQANAKTITTSDQLLQELVRLK 441



 Score = 40.6 bits (93), Expect = 0.077,   Method: Composition-based stats.
 Identities = 16/114 (14%), Positives = 31/114 (27%), Gaps = 23/114 (20%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           ++ S +   SGL     RM ++  NIAN  T G   G      +    + +     G   
Sbjct: 1   MMRSLYSGVSGLQNHQTRMDVVGNNIANVNTIGFKKG------RVNFQDMISQSISGASR 54

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
                  +   +     +  +                  D   T   + +  + 
Sbjct: 55  PTDARGGTNPKQVGLGMNVAS-----------------IDTIHTQGAFQSTQKA 91


>gi|217076898|ref|YP_002334614.1| flagellar basal-body rod protein FlgF [Thermosipho africanus
           TCF52B]
 gi|217036751|gb|ACJ75273.1| flagellar basal-body rod protein FlgF [Thermosipho africanus
           TCF52B]
          Length = 235

 Score = 53.7 bits (127), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 20/134 (14%), Positives = 43/134 (32%), Gaps = 11/134 (8%)

Query: 8   AHIANSGLAV---QSARMQIISENI-ANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
             I  SG  V      ++   + N   ++     T        K     +V   S  +  
Sbjct: 96  FAIDGSGFFVVEKNGEKLYTRAGNFKISSDGFLVTSEGYYVLDKNDQRIKVFDKSDLINN 155

Query: 64  KKIGVDQST-------FVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
            K+    +        +  +           G V+  NV+++ E   M E NR Y    +
Sbjct: 156 IKVVDLDNPRKIGYTFYKGQEIEKENFRILQGYVEKSNVDIVKEMVKMIEANRHYEVLSK 215

Query: 117 TIKQSHDMMTTTLD 130
            +    +++  +++
Sbjct: 216 AVTVHDELLNKSIN 229



 Score = 35.2 bits (79), Expect = 2.7,   Method: Composition-based stats.
 Identities = 16/91 (17%), Positives = 33/91 (36%), Gaps = 3/91 (3%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGS---DPYRRKTISFEEVMHGSGG 60
          +    ++A+ G+     ++  +S NI+NA T G    +     Y  K +   + M     
Sbjct: 1  MYKGVYLASMGMLADITKLDTLSNNISNAETIGYKADNLAFKTYLEKRLHSFKPMPQEKK 60

Query: 61 VRVKKIGVDQSTFVEEFDPGHPVANASGIVK 91
          V +K IG  +   + +              +
Sbjct: 61 VEIKDIGKFEQAVILDEVKTDFSQGNIEHTE 91


>gi|216264643|ref|ZP_03436635.1| flagellar hook protein FlgE [Borrelia burgdorferi 156a]
 gi|215981116|gb|EEC21923.1| flagellar hook protein FlgE [Borrelia burgdorferi 156a]
          Length = 442

 Score = 53.7 bits (127), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 22/43 (51%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           ++  NV++  +  DM  T R + AN +TI  S  ++   + L 
Sbjct: 399 LEMANVDLAEQFTDMIVTQRGFQANAKTITTSDQLLQELVRLK 441



 Score = 40.6 bits (93), Expect = 0.078,   Method: Composition-based stats.
 Identities = 16/114 (14%), Positives = 31/114 (27%), Gaps = 23/114 (20%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           ++ S +   SGL     RM ++  NIAN  T G   G      +    + +     G   
Sbjct: 1   MMRSLYSGVSGLQNHQTRMDVVGNNIANVNTIGFKKG------RVNFQDMISQSISGASR 54

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
                  +   +     +  +                  D   T   + +  + 
Sbjct: 55  PTDARGGTNPKQVGLGMNVAS-----------------IDTIHTQGAFQSTQKA 91


>gi|163744349|ref|ZP_02151709.1| flagellar basal-body rod protein FlgG [Oceanibulbus indolifex
           HEL-45]
 gi|161381167|gb|EDQ05576.1| flagellar basal-body rod protein FlgG [Oceanibulbus indolifex
           HEL-45]
          Length = 261

 Score = 53.7 bits (127), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 17/98 (17%), Positives = 35/98 (35%), Gaps = 5/98 (5%)

Query: 39  PGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVAN-----ASGIVKYP 93
              +P      S    ++  G   V    +  +    E    +P          G ++  
Sbjct: 163 NDPEPVELGQFSLTTFVNEPGMRPVGNNFLLATEASGEAQVVNPGDPGAGMIRQGYLEAS 222

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           NVNV+ +  D+    R Y  N ++I+ +  M++    +
Sbjct: 223 NVNVIQQITDLISAQRAYEMNSKSIETADQMLSAANQI 260



 Score = 42.6 bits (98), Expect = 0.021,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 22/41 (53%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          + +  IA +G+  Q   + +IS NIANA TTG       ++
Sbjct: 1  MKALSIAATGMMAQQTNVDVISNNIANANTTGFKASRAAFQ 41


>gi|119775448|ref|YP_928188.1| flagellar basal body rod protein FlgG [Shewanella amazonensis SB2B]
 gi|119767948|gb|ABM00519.1| flagellar basal-body rod protein FlgG [Shewanella amazonensis SB2B]
          Length = 262

 Score = 53.7 bits (127), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 26/77 (33%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +   G     + G   +            A   G ++  NVNV  E  ++ E+ 
Sbjct: 179 FINPSGLDPIGQNLYLETGASGTPIQGTASLDGMGAIRQGALETSNVNVTEELVNLIESQ 238

Query: 109 RLYMANLQTIKQSHDMM 125
           R+Y  N + I     M+
Sbjct: 239 RIYEMNSKVISAVDQML 255



 Score = 39.5 bits (90), Expect = 0.16,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  +  I+ +GL  Q   + +IS N+ANA T G       +
Sbjct: 1  MHPALWISKTGLDAQQTDIAVISNNVANASTVGYKKSRAVF 41


>gi|317406201|gb|EFV86450.1| flagellar hook protein FlgE [Achromobacter xylosoxidans C54]
          Length = 495

 Score = 53.7 bits (127), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 23/129 (17%), Positives = 39/129 (30%), Gaps = 15/129 (11%)

Query: 5   IASAHIANSG-LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
               +I   G L  Q               T G+T           +  + +   G    
Sbjct: 381 FRGINIGADGSLVAQ--------------YTNGETSIVGTIVLADFANLQGLQPVGNNAW 426

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
           K+        + +              +  NV++  E  +M    R Y AN QTIK   +
Sbjct: 427 KETATSGQPILGQPGSNGLSKVVGQATESSNVDMSKELVNMIIAQRTYQANSQTIKTQDE 486

Query: 124 MMTTTLDLL 132
           +M   ++L 
Sbjct: 487 IMQVLMNLK 495


>gi|255523748|ref|ZP_05390714.1| flagellar hook-associated protein FlgK [Clostridium
          carboxidivorans P7]
 gi|255512617|gb|EET88891.1| flagellar hook-associated protein FlgK [Clostridium
          carboxidivorans P7]
          Length = 649

 Score = 53.7 bits (127), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 32/78 (41%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  L  + +I+ SG+  Q   + + S NIANA T G +      +         ++ + G
Sbjct: 1  MSGLFGTLNISKSGMFAQQRCIDVTSHNIANANTDGYSRQRAELQTTKPFPMPSVNNAVG 60

Query: 61 VRVKKIGVDQSTFVEEFD 78
                GV+ +T     D
Sbjct: 61 PGQLGTGVEVTTIDRIRD 78



 Score = 41.4 bits (95), Expect = 0.045,   Method: Composition-based stats.
 Identities = 8/41 (19%), Positives = 19/41 (46%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             V++  E A++ +    Y AN + I     ++   ++ L+
Sbjct: 608 SGVSLDEEMANLVQFQHCYQANAKLISTVDQLLDVVINGLK 648


>gi|225552055|ref|ZP_03772995.1| flagellar hook protein FlgE [Borrelia sp. SV1]
 gi|225371053|gb|EEH00483.1| flagellar hook protein FlgE [Borrelia sp. SV1]
          Length = 442

 Score = 53.7 bits (127), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 22/43 (51%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           ++  NV++  +  DM  T R + AN +TI  S  ++   + L 
Sbjct: 399 LEMANVDLAEQFTDMIVTQRGFQANAKTITTSDQLLQELVRLK 441



 Score = 40.6 bits (93), Expect = 0.080,   Method: Composition-based stats.
 Identities = 16/114 (14%), Positives = 31/114 (27%), Gaps = 23/114 (20%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           ++ S +   SGL     RM ++  NIAN  T G   G      +    + +     G   
Sbjct: 1   MMRSLYSGVSGLQNHQTRMDVVGNNIANVNTIGFKKG------RVNFQDMISQSISGASR 54

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
                  +   +     +  +                  D   T   + +  + 
Sbjct: 55  PTDARGGTNPKQVGLGMNVAS-----------------IDTIHTQGAFQSTQKA 91


>gi|322378470|ref|ZP_08052922.1| flagellar hook protein FlgE [Helicobacter suis HS1]
 gi|321149114|gb|EFX43562.1| flagellar hook protein FlgE [Helicobacter suis HS1]
          Length = 718

 Score = 53.7 bits (127), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 12/85 (14%), Positives = 32/85 (37%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            + +  +   GG    +        +   + G     +   ++  NV++     ++    
Sbjct: 634 FANDAGLQADGGSVFSETSNSGKALIGAANTGRRGGVSGSKLESSNVDLSRSLTNLIVVQ 693

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R + AN + +  S  ++ T L+L +
Sbjct: 694 RGFQANSKAVTTSDQILNTLLNLKQ 718



 Score = 35.2 bits (79), Expect = 3.2,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 16/33 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ S     +G+      + I S NIAN  TTG
Sbjct: 1  MLRSLWSGVNGMQAHQIALDIESNNIANVNTTG 33


>gi|298529927|ref|ZP_07017329.1| fagellar hook-basal body protein [Desulfonatronospira thiodismutans
           ASO3-1]
 gi|298509301|gb|EFI33205.1| fagellar hook-basal body protein [Desulfonatronospira thiodismutans
           ASO3-1]
          Length = 261

 Score = 53.7 bits (127), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 36/108 (33%), Gaps = 7/108 (6%)

Query: 26  SENIA---NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHP 82
           + NIA   N     D    D     T +    +   G   V+      S  +    P   
Sbjct: 152 ASNIAIGENGEVLADGDLLDVINLTTFTDLNALEKKGRQLVQVKDGADSAPI----PAED 207

Query: 83  VANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
                G ++  NV+ + E  +M  T R + A  + +  SH+     + 
Sbjct: 208 ARIEQGYLENSNVDPVYEMVNMISTMRNFEALQKMMTSSHEKDQQLIQ 255


>gi|219685755|ref|ZP_03540566.1| flagellar hook protein FlgE [Borrelia garinii Far04]
 gi|219672694|gb|EED29722.1| flagellar hook protein FlgE [Borrelia garinii Far04]
          Length = 442

 Score = 53.7 bits (127), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 22/43 (51%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           ++  NV++  +  DM  T R + AN +TI  S  ++   + L 
Sbjct: 399 LEMANVDLAEQFTDMIVTQRGFQANAKTITTSDQLLQELVRLK 441



 Score = 40.2 bits (92), Expect = 0.082,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 20/42 (47%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S +   SGL     RM ++  NIAN  T G   G   ++
Sbjct: 1  MMRSLYSGVSGLQNHQTRMDVVGNNIANVNTIGFKKGRVNFQ 42


>gi|148976396|ref|ZP_01813102.1| flagellar basal body rod protein FlgG [Vibrionales bacterium
           SWAT-3]
 gi|145964219|gb|EDK29475.1| flagellar basal body rod protein FlgG [Vibrionales bacterium
           SWAT-3]
          Length = 262

 Score = 53.7 bits (127), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 23/78 (29%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +   G       G                     +++  NVNV  E  +M E  
Sbjct: 179 FVNPGGLEPVGQNLYLPTGASGDPQEGVPGFDGLGNIRQSMLETSNVNVTEELVNMIEAQ 238

Query: 109 RLYMANLQTIKQSHDMMT 126
           R+Y  N + I     MM+
Sbjct: 239 RVYEMNSKVISSVDKMMS 256



 Score = 40.6 bits (93), Expect = 0.073,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 19/41 (46%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  +  ++ +GL  Q   +  IS N+ANA T G       +
Sbjct: 1  MHPALWVSKTGLDAQQTNISTISNNLANASTIGFKKSRAVF 41


>gi|126444045|ref|YP_001061246.1| flagellar hook protein FlgE [Burkholderia pseudomallei 668]
 gi|134280998|ref|ZP_01767708.1| flagellar biosynthesis/type III secretory pathway lipoprotein
           [Burkholderia pseudomallei 305]
 gi|167725930|ref|ZP_02409166.1| flagellar hook protein FlgE [Burkholderia pseudomallei DM98]
 gi|167905090|ref|ZP_02492295.1| flagellar hook protein FlgE [Burkholderia pseudomallei NCTC 13177]
 gi|254182894|ref|ZP_04889487.1| flagellar hook protein FlgE [Burkholderia pseudomallei 1655]
 gi|254299686|ref|ZP_04967135.1| flagellar hook protein FlgE [Burkholderia pseudomallei 406e]
 gi|125657218|gb|ABN48706.1| flagellar hook protein FlgE [Burkholderia pseudomallei]
 gi|126223536|gb|ABN87041.1| flagellar hook protein FlgE [Burkholderia pseudomallei 668]
 gi|134248020|gb|EBA48104.1| flagellar biosynthesis/type III secretory pathway lipoprotein
           [Burkholderia pseudomallei 305]
 gi|157809637|gb|EDO86807.1| flagellar hook protein FlgE [Burkholderia pseudomallei 406e]
 gi|184213428|gb|EDU10471.1| flagellar hook protein FlgE [Burkholderia pseudomallei 1655]
          Length = 395

 Score = 53.7 bits (127), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 18/41 (43%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           ++  N +V  E  DM    R Y AN + +   + MM   + 
Sbjct: 353 LELSNADVTQELVDMMSAQRNYQANSKVLSTENQMMQALMQ 393



 Score = 40.2 bits (92), Expect = 0.082,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 24/54 (44%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          S +IA SG+   ++++  IS NIANA T G   G   +       +      G 
Sbjct: 2  SFNIALSGINAINSQLNTISHNIANANTYGFKAGRANFATMVAGTQANGTYIGS 55


>gi|253682640|ref|ZP_04863437.1| flagellar basal-body rod protein FlgG [Clostridium botulinum D str.
           1873]
 gi|253562352|gb|EES91804.1| flagellar basal-body rod protein FlgG [Clostridium botulinum D str.
           1873]
          Length = 333

 Score = 53.7 bits (127), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 22/129 (17%), Positives = 44/129 (34%), Gaps = 7/129 (5%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           + S  I  +GL         I+  +     T         +     +    +    V   
Sbjct: 212 MRSFSIEKNGLIKGVLDDGTITA-LGQIAMTSFKNPEGLKKEGKNMYSNTPNSGKPVFRS 270

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
            IG D+       D         G+++  NV++  +  DM  T R + A+ + I    ++
Sbjct: 271 GIGADKDNSESYGDMI------QGMLEMSNVDLAEQFTDMIVTTRAFQASGKMISTGDEI 324

Query: 125 MTTTLDLLR 133
           +   ++L R
Sbjct: 325 LQDIINLKR 333



 Score = 35.2 bits (79), Expect = 3.4,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 19/42 (45%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S +   SG+ V   ++ +   NIAN  TT        ++
Sbjct: 1  MLRSMYAGISGMKVNQTKLDVTGNNIANVSTTAFKGSRVRFQ 42


>gi|332531618|ref|ZP_08407515.1| flagellar hook protein FlgE [Hylemonella gracilis ATCC 19624]
 gi|332038981|gb|EGI75410.1| flagellar hook protein FlgE [Hylemonella gracilis ATCC 19624]
          Length = 512

 Score = 53.7 bits (127), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 39/109 (35%), Gaps = 2/109 (1%)

Query: 25  ISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPG--HP 82
           I +N        +       +    +F  V   S     + I    S       P   + 
Sbjct: 403 IEDNGIITARFSNGETQAFGQLALANFRNVQGLSPTGNGEWIETQASGQPIFGGPTEGNL 462

Query: 83  VANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
               SG ++  +V++  E  +M    R Y AN QTIK    +M T +++
Sbjct: 463 GELRSGALEESSVDLTKELVNMMTAQRTYQANAQTIKTQDQVMQTLVNM 511



 Score = 34.8 bits (78), Expect = 4.0,   Method: Composition-based stats.
 Identities = 14/38 (36%), Positives = 17/38 (44%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
                SGL   S  + +I  NIANA TTG   G   +
Sbjct: 2  GFQQGLSGLNASSRSLDVIGNNIANANTTGFKSGRAEF 39


>gi|225620642|ref|YP_002721900.1| flagellar basal body rod protein [Brachyspira hyodysenteriae WA1]
 gi|225215462|gb|ACN84196.1| flagellar basal body rod protein [Brachyspira hyodysenteriae WA1]
          Length = 282

 Score = 53.7 bits (127), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 19/42 (45%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            ++  NVN + E   M E  R Y  N +TI     ++   ++
Sbjct: 236 FLEMSNVNPINEMVRMIEVQRAYELNSKTISTHDTLVGRVIN 277



 Score = 46.4 bits (108), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/74 (16%), Positives = 26/74 (35%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++   +   SG+  + AR+ +++ N+AN    G    +  ++             G V  
Sbjct: 1  MVRGVYTGASGMMAEQARLDVVANNLANVDKPGFKRDTVSFKAFPEMMAARTEDDGVVIF 60

Query: 64 KKIGVDQSTFVEEF 77
               D   +V   
Sbjct: 61 PLGSTDVRPYVGRM 74


>gi|168180854|ref|ZP_02615518.1| flagellar hook-associated protein FlgK [Clostridium botulinum
          NCTC 2916]
 gi|182668369|gb|EDT80348.1| flagellar hook-associated protein FlgK [Clostridium botulinum
          NCTC 2916]
          Length = 621

 Score = 53.7 bits (127), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 28/78 (35%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  L  + +I  SG+  Q   +   S NIANA T G +      +      +  M+ + G
Sbjct: 1  MSGLFGTLNIGKSGMFAQQGALNTTSHNIANASTEGYSRQRVELQTTRPYCKPSMNSAAG 60

Query: 61 VRVKKIGVDQSTFVEEFD 78
                GV         D
Sbjct: 61 PGQVGTGVQIVAINRVRD 78



 Score = 38.7 bits (88), Expect = 0.27,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 20/41 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             V++  E A++ + N  Y AN + I     ++   ++ L+
Sbjct: 580 SGVSMDEEFANLVQFNHCYQANAKIISTVDQLLDVVINGLK 620


>gi|313200563|ref|YP_004039221.1| flagellar basal body flae domain-containing protein [Methylovorus
           sp. MP688]
 gi|312439879|gb|ADQ83985.1| flagellar basal body FlaE domain protein [Methylovorus sp. MP688]
          Length = 402

 Score = 53.7 bits (127), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 17/84 (20%), Positives = 31/84 (36%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
             +    +   G  +  +        + +   G      S   +  NV++  E  +M   
Sbjct: 318 KFANPNGLSALGNNQFAETADAGVPVIGKAGTGGLGTLQSSATEDSNVDLTAELVNMITA 377

Query: 108 NRLYMANLQTIKQSHDMMTTTLDL 131
            R Y AN QTIK    ++ T ++L
Sbjct: 378 QRYYQANAQTIKTQDQVLQTLVNL 401



 Score = 36.0 bits (81), Expect = 1.6,   Method: Composition-based stats.
 Identities = 19/93 (20%), Positives = 29/93 (31%), Gaps = 5/93 (5%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          S     SGL   S  + +I  N+ANA T G       +     +              K+
Sbjct: 2  SFQQGLSGLNAASKSLDVIGNNVANANTVGFKQSRAEFADVYANALNGSGTGSAGIGVKV 61

Query: 67 GVDQSTFVE-----EFDPGHPVANASGIVKYPN 94
             Q  F +       +P     N +G  +  N
Sbjct: 62 ADIQRQFTQGNITNTENPLDIAINGNGFFRLSN 94


>gi|254695093|ref|ZP_05156921.1| flagellar hook protein FlgE [Brucella abortus bv. 3 str. Tulya]
 gi|261215444|ref|ZP_05929725.1| flagellar hook protein flgE [Brucella abortus bv. 3 str. Tulya]
 gi|260917051|gb|EEX83912.1| flagellar hook protein flgE [Brucella abortus bv. 3 str. Tulya]
          Length = 396

 Score = 53.7 bits (127), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 37/111 (33%), Gaps = 2/111 (1%)

Query: 25  ISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVA 84
           +  + A      +      YR    +       +       +   +S  V    P     
Sbjct: 286 VGNDGAVVAVYENGTQKVLYRIPLANVASPDRMTVVSGNIFLPSAESGDVRLGFPQGDGM 345

Query: 85  N--ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
               SG ++  N ++  E  DM E  R Y AN +  +   ++M   +++ R
Sbjct: 346 GKIMSGTLEESNADIAQELTDMIEAQRSYTANSKVFQTGFELMDVLVNMKR 396



 Score = 44.5 bits (103), Expect = 0.004,   Method: Composition-based stats.
 Identities = 18/90 (20%), Positives = 30/90 (33%), Gaps = 2/90 (2%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG- 60
            L        SG+  Q+ R+  +++NIANA T G       +    +      + SG  
Sbjct: 1  MSLYGMMRTGVSGMNAQANRLSTVADNIANASTVGYKRAETQFSSLVLPSTAGQYNSGSV 60

Query: 61 -VRVKKIGVDQSTFVEEFDPGHPVANASGI 89
             V+    DQ              + +G 
Sbjct: 61 LTDVRYGISDQGGIRSTSSTTDLAIDGNGY 90


>gi|220932495|ref|YP_002509403.1| flagellar basal body rod protein [Halothermothrix orenii H 168]
 gi|219993805|gb|ACL70408.1| flagellar basal body rod protein [Halothermothrix orenii H 168]
          Length = 248

 Score = 53.7 bits (127), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 23/55 (41%)

Query: 76  EFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
                       G ++  NVN++ E   M E NR +  N + IK +   ++  ++
Sbjct: 188 REIQASDYQIKQGYLETSNVNIVKEMVRMIEVNRAFEVNQKVIKNADQTLSKAVN 242



 Score = 36.4 bits (82), Expect = 1.3,   Method: Composition-based stats.
 Identities = 17/102 (16%), Positives = 31/102 (30%), Gaps = 7/102 (6%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +I   + A S +     +M++++ N+AN  T G              F   +       +
Sbjct: 1   MIKGIYTAASSMVTNQRKMKLVANNLANVNTAGYKRDEGIQVSFPEVFISRLEKGQATPL 60

Query: 64  ------KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
                  KI  D + F  E    H        +      V+ 
Sbjct: 61  GELGTGVKIEEDYTDFR-EGQMNHTGNPLDVAIDGNGFFVVE 101


>gi|283834455|ref|ZP_06354196.1| flagellar hook protein FlgE [Citrobacter youngae ATCC 29220]
 gi|291070002|gb|EFE08111.1| flagellar hook protein FlgE [Citrobacter youngae ATCC 29220]
          Length = 400

 Score = 53.7 bits (127), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 16/83 (19%), Positives = 30/83 (36%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
           T   E  +    G    + G   +  +     G     +SG+++  NV++  E  ++   
Sbjct: 316 TFPDENGLQAVSGTAWVQTGESGTPLIGTPGSGSCGTLSSGMLESSNVDITNELVNLMTA 375

Query: 108 NRLYMANLQTIKQSHDMMTTTLD 130
            R Y AN + I  S  +      
Sbjct: 376 QRNYQANTKVISTSTQLDQALFQ 398


>gi|264676570|ref|YP_003276476.1| FlgE [Comamonas testosteroni CNB-2]
 gi|262207082|gb|ACY31180.1| FlgE [Comamonas testosteroni CNB-2]
          Length = 422

 Score = 53.7 bits (127), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 21/103 (20%), Positives = 37/103 (35%)

Query: 29  IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASG 88
           I  + + G T           +  + +   G  +                 G   +  SG
Sbjct: 319 IVASYSNGVTRTEGQIALAAFTNTQGLGSIGNNKWVATSDSGPALNGSAQTGTFGSLQSG 378

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            ++  NV++  E  +M    R Y AN QTIK    + +T ++L
Sbjct: 379 ALEESNVDLTAELVNMMTAQRSYQANAQTIKTQDQVFSTLVNL 421



 Score = 37.2 bits (84), Expect = 0.73,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 35/124 (28%), Gaps = 7/124 (5%)

Query: 7   SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
                 SGL   S  + +I  NIAN+ TTG       +     S      G        +
Sbjct: 2   GFQQGLSGLNAASKNLDVIGHNIANSNTTGFKASRADFAEMVASAIGSASGQSSGIGVNV 61

Query: 67  GVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRL------YMANLQTIKQ 120
                 F +         N    +      V+ ++       R          NL+T+  
Sbjct: 62  ASVSQQFRQGSI-TSTGNNLDIAINGNGFFVVKQSDGSIAYTRAGNFGLDKEGNLKTVDN 120

Query: 121 SHDM 124
            + M
Sbjct: 121 DNVM 124


>gi|126738557|ref|ZP_01754262.1| flagellar hook protein FlgE, putative [Roseobacter sp. SK209-2-6]
 gi|126720356|gb|EBA17062.1| flagellar hook protein FlgE, putative [Roseobacter sp. SK209-2-6]
          Length = 446

 Score = 53.7 bits (127), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 23/44 (52%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++    +V  E  DM +T R Y +N + I+   +M+  T ++ R
Sbjct: 403 MEESATDVATELTDMIKTQRAYSSNAKVIQTVDEMLQETTNIKR 446



 Score = 36.8 bits (83), Expect = 1.0,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 33/75 (44%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            + ++ +   SGL+  ++ +  IS+NIAN+ T G       ++   +  +   + +GGV
Sbjct: 14 MTISSALNAGVSGLSANASSLAAISDNIANSSTRGYKRIQTDFQSMVVGSKGGSYTAGGV 73

Query: 62 RVKKIGVDQSTFVEE 76
             K+ +        
Sbjct: 74 GFDKLRLVDERGPLV 88


>gi|255323598|ref|ZP_05364728.1| flagellar hook protein FlgE [Campylobacter showae RM3277]
 gi|255299312|gb|EET78599.1| flagellar hook protein FlgE [Campylobacter showae RM3277]
          Length = 756

 Score = 53.7 bits (127), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 15/85 (17%), Positives = 31/85 (36%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
             +  + + G GG    +        +           ++  ++  NV++      +   
Sbjct: 672 KFANNQGLAGEGGNLFSRTANSGDPIIGAAQTAGRGKISASSLEMSNVDLSRSLTQLIVV 731

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLL 132
            R + AN +TI  S +M+ T L L 
Sbjct: 732 QRGFQANSKTITTSDEMLNTLLQLK 756



 Score = 36.0 bits (81), Expect = 1.6,   Method: Composition-based stats.
 Identities = 14/71 (19%), Positives = 25/71 (35%), Gaps = 4/71 (5%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY----RRKTISFEEVMHGSG 59
          ++ S     +GL      M +   NIAN  T G       +     + +       +  G
Sbjct: 1  MMRSLWSGVTGLQAHQIAMDVEGNNIANVNTVGYKYNRANFDDLIYQTSRIATAPQNQHG 60

Query: 60 GVRVKKIGVDQ 70
          GV   ++G+  
Sbjct: 61 GVNNMEVGLGT 71


>gi|242278483|ref|YP_002990612.1| flagellar basal-body rod protein FlgF [Desulfovibrio salexigens DSM
           2638]
 gi|242121377|gb|ACS79073.1| flagellar basal-body rod protein FlgF [Desulfovibrio salexigens DSM
           2638]
          Length = 255

 Score = 53.7 bits (127), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 10/49 (20%), Positives = 18/49 (36%)

Query: 82  PVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
               A G ++  NV V+ E   M E  R +    + I  +  +    + 
Sbjct: 200 EGEVAQGYIEKSNVEVVNEMVAMIECQRSFEMYQKMITTTDQLDQKVIQ 248


>gi|170760196|ref|YP_001788056.1| flagellar hook-associated protein FlgK [Clostridium botulinum A3
          str. Loch Maree]
 gi|169407185|gb|ACA55596.1| flagellar hook-associated protein FlgK [Clostridium botulinum A3
          str. Loch Maree]
          Length = 621

 Score = 53.7 bits (127), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 28/78 (35%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  L  + +I  SG+  Q   +   S NIANA T G +      +      +  M+ + G
Sbjct: 1  MSGLFGTLNIGKSGMFAQQGALNTTSHNIANASTEGYSRQRVELQTTRPYCKPSMNSAAG 60

Query: 61 VRVKKIGVDQSTFVEEFD 78
                GV         D
Sbjct: 61 PGQVGTGVQIVAINRVRD 78



 Score = 38.7 bits (88), Expect = 0.28,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 20/41 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             V++  E A++ + N  Y AN + I     ++   ++ L+
Sbjct: 580 SGVSMDEEFANLVQFNHCYQANAKIISTVDQLLDVVINGLK 620


>gi|153011508|ref|YP_001372722.1| flagellar hook protein FlgE [Ochrobactrum anthropi ATCC 49188]
 gi|151563396|gb|ABS16893.1| flagellar basal body FlaE domain protein [Ochrobactrum anthropi
           ATCC 49188]
          Length = 426

 Score = 53.7 bits (127), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 24/48 (50%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            SG ++  N ++  E  DM E  R Y AN +  +   ++M   ++L R
Sbjct: 379 MSGTLEESNADIAQELTDMIEAQRSYTANSKVFQTGSELMDVLVNLKR 426



 Score = 41.8 bits (96), Expect = 0.030,   Method: Composition-based stats.
 Identities = 18/90 (20%), Positives = 30/90 (33%), Gaps = 2/90 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG- 60
             L        SG+  Q+ R+  +++NIANA T G       +    +      + SG  
Sbjct: 30  MSLYGMMRTGVSGMNAQANRLSAVADNIANASTVGYKRAETQFSSLVLPSTGGQYNSGSV 89

Query: 61  -VRVKKIGVDQSTFVEEFDPGHPVANASGI 89
              V+    DQ              + +G 
Sbjct: 90  LTDVRYGISDQGGIRSTSSTTDLAIDGNGY 119


>gi|114762177|ref|ZP_01441645.1| flagellar hook protein FlgE, putative [Pelagibaca bermudensis
           HTCC2601]
 gi|114545201|gb|EAU48204.1| flagellar hook protein FlgE, putative [Roseovarius sp. HTCC2601]
          Length = 432

 Score = 53.7 bits (127), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 25/134 (18%), Positives = 46/134 (34%), Gaps = 8/134 (5%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
            A   I+  G +V +     + EN   +           Y    I   ++ + +G + V 
Sbjct: 302 FAPISISKDGSSVGNMVSVEVDENGYVSALYDSGQSQVLY---QIPLVDLPNYNGMIAVD 358

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIV-----KYPNVNVLVETADMRETNRLYMANLQTIK 119
                 S     F         +G V     +    ++  E  DM  T R Y +N + I+
Sbjct: 359 GSTFRPSPESGSFFLWDAGDGPTGSVKSYARQESATDIAQELTDMIRTQRAYSSNAKVIQ 418

Query: 120 QSHDMMTTTLDLLR 133
              +M+  T ++ R
Sbjct: 419 TVDEMLQETTNMKR 432



 Score = 36.4 bits (82), Expect = 1.4,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 27/59 (45%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
            + +S +   SGLA  ++R+  IS+NIAN+ T G       +    +S       + G
Sbjct: 1  MTISSSLNAGVSGLAGNASRLSAISDNIANSSTYGYRRVETDFTALVMSSGSQRAYTAG 59


>gi|212709492|ref|ZP_03317620.1| hypothetical protein PROVALCAL_00534 [Providencia alcalifaciens DSM
           30120]
 gi|212687830|gb|EEB47358.1| hypothetical protein PROVALCAL_00534 [Providencia alcalifaciens DSM
           30120]
          Length = 422

 Score = 53.7 bits (127), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 30/83 (36%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +    +   GG          +        G      SG ++  NV++  E   M    
Sbjct: 339 FANPNGLVSQGGNVWAASNASGNPMDGVPGVGQFGKLTSGALESSNVDMSQELISMIVMQ 398

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y +N QTIK    M+ T ++L
Sbjct: 399 RNYQSNAQTIKTQDQMLQTLVNL 421


>gi|111115108|ref|YP_709726.1| flagellar hook protein FlgE [Borrelia afzelii PKo]
 gi|216263795|ref|ZP_03435789.1| flagellar hook protein FlgE [Borrelia afzelii ACA-1]
 gi|110890382|gb|ABH01550.1| flagellar hook protein [Borrelia afzelii PKo]
 gi|215979839|gb|EEC20661.1| flagellar hook protein FlgE [Borrelia afzelii ACA-1]
          Length = 442

 Score = 53.7 bits (127), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 17/84 (20%), Positives = 31/84 (36%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +  SG     +        + E          SG+++  NV++  +  DM  T 
Sbjct: 358 FMNPGGLAKSGDTNFVETSNSGQARIGETGLAGLGDIRSGVLEMANVDLAEQFTDMIVTQ 417

Query: 109 RLYMANLQTIKQSHDMMTTTLDLL 132
           R + AN +TI  S  ++   + L 
Sbjct: 418 RGFQANAKTITTSDQLLQELVRLK 441



 Score = 42.2 bits (97), Expect = 0.022,   Method: Composition-based stats.
 Identities = 17/114 (14%), Positives = 31/114 (27%), Gaps = 23/114 (20%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           ++ S +   SGL     RM ++  NIAN  T G   G      +    + +     G   
Sbjct: 1   MMRSLYSGVSGLQNHQTRMDVVGNNIANVNTIGFKKG------RVNFQDMISQSISGASR 54

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
                  +   +     +  A                  D   T   + +  + 
Sbjct: 55  PTDVRGGTNPKQVGLGMNVAA-----------------IDTIHTQGAFQSTQKA 91


>gi|85710164|ref|ZP_01041229.1| flagellar hook protein [Erythrobacter sp. NAP1]
 gi|85688874|gb|EAQ28878.1| flagellar hook protein [Erythrobacter sp. NAP1]
          Length = 279

 Score = 53.7 bits (127), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 16/79 (20%), Positives = 32/79 (40%)

Query: 55  MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
           +   G  + +           +   G+  A A+G ++  NV++  E   +    R + AN
Sbjct: 201 LRSIGQTKWEATAESGDPEFGQPGVGNFGAIATGTLERSNVDLAEEMVSLLTAQRNFQAN 260

Query: 115 LQTIKQSHDMMTTTLDLLR 133
            + I  +  +  T L+L R
Sbjct: 261 ARAIDTATAITQTVLNLQR 279


>gi|302343296|ref|YP_003807825.1| fagellar hook-basal body protein [Desulfarculus baarsii DSM 2075]
 gi|301639909|gb|ADK85231.1| fagellar hook-basal body protein [Desulfarculus baarsii DSM 2075]
          Length = 239

 Score = 53.7 bits (127), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 32/77 (41%)

Query: 55  MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
           +   GG   +         ++        A ASG ++    +++ E        R + AN
Sbjct: 161 LRAVGGNAFQATDASGPAVIDAAGQPGYGAIASGALQTSGTDIVSEMVGQITAQRSFEAN 220

Query: 115 LQTIKQSHDMMTTTLDL 131
           L+TI+   +M+ T LD+
Sbjct: 221 LKTIRTGDEMLGTILDI 237



 Score = 34.1 bits (76), Expect = 6.4,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 15/38 (39%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGS 41
          +I       SG+     R+   + N+AN  T G  P  
Sbjct: 2  IIDGIAAGISGMNAAVRRLNQSANNLANISTPGYVPSR 39


>gi|114569239|ref|YP_755919.1| hypothetical protein Mmar10_0688 [Maricaulis maris MCS10]
 gi|114339701|gb|ABI64981.1| protein of unknown function DUF1078 domain protein [Maricaulis
           maris MCS10]
          Length = 461

 Score = 53.7 bits (127), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 14/86 (16%), Positives = 31/86 (36%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
           T    + +    G          +  +     G     A+  ++  NV++  E   +  T
Sbjct: 376 TFVNPDGLEAQSGGTFTVTPESGAYTLNPPGLGSSGQIAASTLESSNVDLANEFTSLITT 435

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y A+ + I  + +M+   + + R
Sbjct: 436 QRAYSASSKIITTADEMLDEAIRMKR 461


>gi|262653|gb|AAB24739.1| flagellar basal body distal rod protein [Caulobacter vibrioides]
          Length = 262

 Score = 53.7 bits (127), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 17/41 (41%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NV+ + E   +    R Y  N + I  +  M+  T  L
Sbjct: 220 EASNVDAVSEITALITAQRAYEMNSKVISTADQMLQATSQL 260



 Score = 41.4 bits (95), Expect = 0.043,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 21/41 (51%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          + +   A SG+A Q   +++IS NIAN  T G       ++
Sbjct: 1  MQALRTAASGMAAQQLNVEVISNNIANMNTVGFKRQRAEFQ 41


>gi|323490149|ref|ZP_08095369.1| fagellar hook-basal body protein [Planococcus donghaensis MPA1U2]
 gi|323396197|gb|EGA89023.1| fagellar hook-basal body protein [Planococcus donghaensis MPA1U2]
          Length = 255

 Score = 53.7 bits (127), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 29/70 (41%)

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
             +         +          SG+++  NV++  E  +M    R + AN +TI  S +
Sbjct: 186 GSMYEVPPNTPTQTAALANTEIGSGMLEMSNVDLTEEFTEMIIAQRGFQANSRTITTSDE 245

Query: 124 MMTTTLDLLR 133
           ++   ++L R
Sbjct: 246 ILQEVMNLKR 255


>gi|167574701|ref|ZP_02367575.1| flagellar hook protein flgE [Burkholderia oklahomensis C6786]
          Length = 395

 Score = 53.7 bits (127), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 19/41 (46%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           ++  N +V  E  DM    R Y AN + I   + MM + + 
Sbjct: 353 LEMSNADVTRELVDMMSAQRNYQANSKVIATENQMMQSLMQ 393



 Score = 36.4 bits (82), Expect = 1.2,   Method: Composition-based stats.
 Identities = 14/39 (35%), Positives = 20/39 (51%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          S +IA SG+   + ++  IS NIAN  T G   G   + 
Sbjct: 2  SFNIALSGINAVNNQLNTISHNIANTGTYGFKSGRANFA 40


>gi|27381984|ref|NP_773513.1| flagellar basal body rod protein FlgG [Bradyrhizobium japonicum
           USDA 110]
 gi|27355154|dbj|BAC52138.1| flagellar basal-body rod protein [Bradyrhizobium japonicum USDA
           110]
          Length = 262

 Score = 53.7 bits (127), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 13/79 (16%), Positives = 28/79 (35%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            + E  +   G    ++     +  V               ++  NV+ + E  ++    
Sbjct: 178 FANEAGLEPLGSNLYRETTASGTPVVGLPGDAGYGKINQKYLEASNVDPVKEITELISAQ 237

Query: 109 RLYMANLQTIKQSHDMMTT 127
           R Y  N + I+ S +M +T
Sbjct: 238 RAYEMNAKVIQASDEMAST 256



 Score = 42.9 bits (99), Expect = 0.013,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 29/70 (41%), Gaps = 7/70 (10%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          + S  IA +G+  Q   +++I+ NIAN  +T        Y+R    F ++ +    ++  
Sbjct: 1  MKSLAIAATGMNAQQTNIEVIANNIANINSTS-------YKRARAEFTDLFYQMDRMQGV 53

Query: 65 KIGVDQSTFV 74
                S   
Sbjct: 54 ANVNGSSPIP 63


>gi|84502376|ref|ZP_01000512.1| flagellar hook protein FlgE, putative [Oceanicola batsensis
           HTCC2597]
 gi|84389188|gb|EAQ01985.1| flagellar hook protein FlgE, putative [Oceanicola batsensis
           HTCC2597]
          Length = 422

 Score = 53.7 bits (127), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 24/44 (54%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           V+  NV++  E  ++ +  R + +N + I  + +M+  T+ L R
Sbjct: 379 VESSNVDIAEELTELIQKQRAFSSNAKIITTADEMLDETVRLKR 422


>gi|15645489|ref|NP_207664.1| flagellar hook protein FlgE [Helicobacter pylori 26695]
 gi|2506418|sp|P50610|FLGE_HELPY RecName: Full=Flagellar hook protein flgE
 gi|2313997|gb|AAD07911.1| flagellar hook (flgE) [Helicobacter pylori 26695]
          Length = 718

 Score = 53.3 bits (126), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 13/85 (15%), Positives = 34/85 (40%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            + +  +   GG    + G      +   + G   + +   ++  NV++     ++    
Sbjct: 634 FANDAGLQALGGNVFSQTGNSGQALIGAANTGRRGSISGSKLESSNVDLSRSLTNLIVVQ 693

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R + AN + +  S  ++ T L+L +
Sbjct: 694 RGFQANSKAVTTSDQILNTLLNLKQ 718



 Score = 34.8 bits (78), Expect = 3.9,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 16/33 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ S     +G+      + I S NIAN  TTG
Sbjct: 1  MLRSLWSGVNGMQAHQIALDIESNNIANVNTTG 33


>gi|84388093|ref|ZP_00990989.1| Flagellar basal body rod protein FlgG [Vibrio splendidus 12B01]
 gi|84377160|gb|EAP94030.1| Flagellar basal body rod protein FlgG [Vibrio splendidus 12B01]
          Length = 262

 Score = 53.3 bits (126), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 23/78 (29%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +   G       G                     +++  NVNV  E  +M E  
Sbjct: 179 FVNPGGLEPVGQNLYLPTGASGDPQEGVPGFDGLGNIRQSMLETSNVNVTEELVNMIEAQ 238

Query: 109 RLYMANLQTIKQSHDMMT 126
           R+Y  N + I     MM+
Sbjct: 239 RVYEMNSKVISSVDKMMS 256



 Score = 40.6 bits (93), Expect = 0.081,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 19/41 (46%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  +  ++ +GL  Q   +  IS N+ANA T G       +
Sbjct: 1  MHPALWVSKTGLDAQQTNISTISNNLANASTIGFKKSRAVF 41


>gi|238916755|ref|YP_002930272.1| flagellar hook protein FlgE [Eubacterium eligens ATCC 27750]
 gi|238872115|gb|ACR71825.1| flagellar hook protein FlgE [Eubacterium eligens ATCC 27750]
          Length = 464

 Score = 53.3 bits (126), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 21/103 (20%), Positives = 37/103 (35%), Gaps = 8/103 (7%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           N         S+P   +                  IG D +            + +SG++
Sbjct: 370 NIGQIAVATFSNPEGLQKEGENLYSATLNSGSFDGIGEDVT--------TSDGSISSGVL 421

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV++  E  +M  T R Y AN + I  S  ++   ++L R
Sbjct: 422 EMSNVDLSSEFTNMITTQRGYQANSRIITVSDTLLEELINLKR 464



 Score = 43.3 bits (100), Expect = 0.010,   Method: Composition-based stats.
 Identities = 22/74 (29%), Positives = 29/74 (39%), Gaps = 6/74 (8%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG------DTPGSDPYRRKTISFEEVMHG 57
          ++ S + A SGL     RM +I  NIAN  T                  +T S      G
Sbjct: 24 MMRSMYSAVSGLKAHQTRMDVIGNNIANVNTVAFKSQSMTFSEVFYQTTQTASGPNAESG 83

Query: 58 SGGVRVKKIGVDQS 71
           GG   K+IG+  S
Sbjct: 84 KGGTNAKQIGLGSS 97


>gi|77464881|ref|YP_354385.1| putative flagellar hook protein [Rhodobacter sphaeroides 2.4.1]
 gi|126463723|ref|YP_001044837.1| hypothetical protein Rsph17029_2963 [Rhodobacter sphaeroides ATCC
           17029]
 gi|221640802|ref|YP_002527064.1| hypothetical protein RSKD131_2703 [Rhodobacter sphaeroides KD131]
 gi|332559780|ref|ZP_08414102.1| FlgE2 [Rhodobacter sphaeroides WS8N]
 gi|77389299|gb|ABA80484.1| putative flagellar hook protein [Rhodobacter sphaeroides 2.4.1]
 gi|126105387|gb|ABN78065.1| protein of unknown function DUF1078 domain protein [Rhodobacter
           sphaeroides ATCC 17029]
 gi|221161583|gb|ACM02563.1| Hypothetical Protein RSKD131_2703 [Rhodobacter sphaeroides KD131]
 gi|332277492|gb|EGJ22807.1| FlgE2 [Rhodobacter sphaeroides WS8N]
          Length = 465

 Score = 53.3 bits (126), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 22/43 (51%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +    +V  E  ++ +T R Y +N + I+   +M+  T +L R
Sbjct: 423 EGSTTDVATELTNLIQTQRAYSSNAKIIQTVDEMLQETTNLKR 465



 Score = 36.8 bits (83), Expect = 1.2,   Method: Composition-based stats.
 Identities = 12/64 (18%), Positives = 25/64 (39%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            + +S +   +GL   + ++  I++NIAN+ T G       +    I+           
Sbjct: 1  MTISSSLNAGVAGLNANATKLATIADNIANSGTYGYKRADADFESMVITQSANGGSYAAG 60

Query: 62 RVKK 65
           V+ 
Sbjct: 61 GVRA 64


>gi|15895408|ref|NP_348757.1| flagellar basal body rod protein FlgG [Clostridium acetobutylicum
           ATCC 824]
 gi|15025131|gb|AAK80097.1|AE007715_2 Flagellar basal body rod protein [Clostridium acetobutylicum ATCC
           824]
 gi|325509554|gb|ADZ21190.1| flagellar basal body rod protein FlgG [Clostridium acetobutylicum
           EA 2018]
          Length = 256

 Score = 53.3 bits (126), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 15/111 (13%), Positives = 39/111 (35%), Gaps = 3/111 (2%)

Query: 25  ISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVE--EFDPGHP 82
            + N+A A+  G     +      +    +   +G   +  +G          +    + 
Sbjct: 147 TASNVAVAQD-GTISIQNGQTTTNVGKINIYDVTGNDSMISVGKSLFVPKAGAQMFVNNK 205

Query: 83  VANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
                  ++  NV++  E  DM    R Y  N ++++   +M +   ++ +
Sbjct: 206 SVIYQNYLENSNVDLGTEMTDMIVAQRAYQINSKSLETGDNMWSIVNNMKK 256



 Score = 35.2 bits (79), Expect = 3.3,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 21/41 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          ++       SG+A +  ++  IS N+AN+ TTG    +  +
Sbjct: 1  MLRIMWNGVSGMAAEQEKLDSISNNLANSSTTGYKSETVGF 41


>gi|319405401|emb|CBI79020.1| Flagellar basal-body rod protein flgG [Bartonella sp. AR 15-3]
          Length = 264

 Score = 53.3 bits (126), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 13/93 (13%), Positives = 31/93 (33%)

Query: 33  RTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKY 92
            T  +   +   R      E  +   G    ++     +    +       +    +++ 
Sbjct: 164 DTDPNAVEAGRLRLVNFVNEVGLEPIGDNLFRETQASGAPVPGDPKEDGYGSIMQAMLET 223

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
            NV+ + E  ++    R Y  N + I+ S +M 
Sbjct: 224 SNVDPVKEMTELIAAQRSYEMNSKVIQASDEMA 256



 Score = 43.3 bits (100), Expect = 0.010,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 22/41 (53%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          + S  IA +G+A Q   + +I+ N+AN  TTG   G   + 
Sbjct: 3  MKSLSIAATGMAAQQTNLDVIANNMANINTTGFKRGRAEFA 43


>gi|310764860|gb|ADP09810.1| Flagellar hook protein FlgE [Erwinia sp. Ejp617]
          Length = 410

 Score = 53.3 bits (126), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 33/77 (42%)

Query: 55  MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
           +  +G     +      + +     G   +   G ++  NV++  E  +M    R Y +N
Sbjct: 333 LQQNGNNTWVESPQSGGSIIGMAGTGSFGSLTGGALENSNVDLGSEMVNMIVYQRNYQSN 392

Query: 115 LQTIKQSHDMMTTTLDL 131
            QTIK   +M+ T ++L
Sbjct: 393 SQTIKTQSEMLQTLVNL 409


>gi|224534234|ref|ZP_03674812.1| flagellar hook protein FlgE [Borrelia spielmanii A14S]
 gi|224514336|gb|EEF84652.1| flagellar hook protein FlgE [Borrelia spielmanii A14S]
          Length = 442

 Score = 53.3 bits (126), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/84 (20%), Positives = 31/84 (36%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +  SG     +        + E          SG+++  NV++  +  DM  T 
Sbjct: 358 FMNPGGLAKSGDTNFVETSNSGQARIGETGLAGLGDIRSGVLEMANVDLAEQFTDMIVTQ 417

Query: 109 RLYMANLQTIKQSHDMMTTTLDLL 132
           R + AN +TI  S  ++   + L 
Sbjct: 418 RGFQANAKTITTSDQLLQELVRLK 441



 Score = 42.2 bits (97), Expect = 0.023,   Method: Composition-based stats.
 Identities = 17/114 (14%), Positives = 31/114 (27%), Gaps = 23/114 (20%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           ++ S +   SGL     RM ++  NIAN  T G   G      +    + +     G   
Sbjct: 1   MMRSLYSGVSGLQNHQTRMDVVGNNIANVNTIGFKKG------RVNFQDMISQSISGASR 54

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
                  +   +     +  A                  D   T   + +  + 
Sbjct: 55  PTDVRGGTNPKQVGLGMNVAA-----------------IDTIHTQGAFQSTQKA 91


>gi|224532235|ref|ZP_03672867.1| flagellar hook protein FlgE [Borrelia valaisiana VS116]
 gi|224511700|gb|EEF82106.1| flagellar hook protein FlgE [Borrelia valaisiana VS116]
          Length = 442

 Score = 53.3 bits (126), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/84 (20%), Positives = 31/84 (36%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +  SG     +        + E          SG+++  NV++  +  DM  T 
Sbjct: 358 FMNPGGLAKSGDTNFVETSNSGQARIGETGLAGLGDIRSGVLEMANVDLAEQFTDMIVTQ 417

Query: 109 RLYMANLQTIKQSHDMMTTTLDLL 132
           R + AN +TI  S  ++   + L 
Sbjct: 418 RGFQANAKTITTSDQLLQELVRLK 441



 Score = 41.0 bits (94), Expect = 0.051,   Method: Composition-based stats.
 Identities = 17/114 (14%), Positives = 31/114 (27%), Gaps = 23/114 (20%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           ++ S +   SGL     RM ++  NIAN  T G   G      +    + +     G   
Sbjct: 1   MMRSLYSGVSGLQNHQTRMDVVGNNIANVNTIGFKKG------RVNFQDMISQSISGASR 54

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
                  +   +     +  A                  D   T   + +  + 
Sbjct: 55  PTDTRGGTNPKQVGLGMNVAA-----------------IDTIHTQGAFQSTQKA 91


>gi|317014278|gb|ADU81714.1| flagellar hook protein FlgE [Helicobacter pylori Gambia94/24]
          Length = 718

 Score = 53.3 bits (126), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 13/85 (15%), Positives = 34/85 (40%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            + +  +   GG    + G      +   + G   + +   ++  NV++     ++    
Sbjct: 634 FANDAGLQALGGNVFSQTGNSGQALIGAANTGRRGSISGSKLESSNVDLSRSLTNLIVVQ 693

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R + AN + +  S  ++ T L+L +
Sbjct: 694 RGFQANSKAVTTSDQILNTLLNLKQ 718



 Score = 34.8 bits (78), Expect = 4.0,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 16/33 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ S     +G+      + I S NIAN  TTG
Sbjct: 1  MLRSLWSGVNGMQAHQIALDIESNNIANVNTTG 33


>gi|157738165|ref|YP_001490849.1| flagellar hook protein FlgE [Arcobacter butzleri RM4018]
 gi|157700019|gb|ABV68179.1| flagellar hook protein FlgE [Arcobacter butzleri RM4018]
          Length = 723

 Score = 53.3 bits (126), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 15/100 (15%), Positives = 36/100 (36%), Gaps = 4/100 (4%)

Query: 38  TPGSDPYRRKTISFEEVMHGSG----GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
           T G   Y    +S     +  G    G    +   +    +   +  +        ++  
Sbjct: 624 TEGGVQYAVGQVSIARFTNNQGLLAVGNNNFQATQESGKAIYSTNNNNTAGMQGKTLELS 683

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             ++     ++    R + AN ++I  + +M+TT ++L R
Sbjct: 684 EADLSESLVNLMVFQRAFEANAKSITTADEMLTTLINLKR 723


>gi|15611871|ref|NP_223522.1| flagellar hook protein FlgE [Helicobacter pylori J99]
 gi|11386868|sp|Q9ZKY0|FLGE_HELPJ RecName: Full=Flagellar hook protein flgE
 gi|4155354|gb|AAD06366.1| FLAGELLAR HOOK PROTEIN [Helicobacter pylori J99]
 gi|307637557|gb|ADN80007.1| Flagellar hook protein [Helicobacter pylori 908]
 gi|325996148|gb|ADZ51553.1| Flagellar hook protein [Helicobacter pylori 2018]
 gi|325997744|gb|ADZ49952.1| Flagellar hook protein [Helicobacter pylori 2017]
          Length = 718

 Score = 53.3 bits (126), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 13/85 (15%), Positives = 34/85 (40%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            + +  +   GG    + G      +   + G   + +   ++  NV++     ++    
Sbjct: 634 FANDAGLQALGGNVFSQTGNSGQALIGAANTGRRGSISGSKLESSNVDLSRSLTNLIVVQ 693

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R + AN + +  S  ++ T L+L +
Sbjct: 694 RGFQANSKAVTTSDQILNTLLNLKQ 718



 Score = 34.8 bits (78), Expect = 4.0,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 16/33 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ S     +G+      + I S NIAN  TTG
Sbjct: 1  MLRSLWSGVNGMQAHQIALDIESNNIANVNTTG 33


>gi|330501139|ref|YP_004378008.1| flagellar basal-body rod protein FlgG [Pseudomonas mendocina NK-01]
 gi|328915425|gb|AEB56256.1| flagellar basal-body rod protein FlgG [Pseudomonas mendocina NK-01]
          Length = 261

 Score = 53.3 bits (126), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/130 (17%), Positives = 42/130 (32%), Gaps = 7/130 (5%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV--MHGSGG 60
            L  +  +        S+R  + S+ I  A   GDT  S+  +   ++F     +   GG
Sbjct: 135 PLTPAIEVP-----AGSSRFTVGSDGIVTAVLAGDTLPSELGQITLVNFTNPGGLEALGG 189

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
              ++                      G+++  NV V+     M    R Y AN + +  
Sbjct: 190 NLYRETVASGEPVEGVPGADGLGNLKQGVLEGSNVQVVEAMVAMISIQRAYEANAKVLDA 249

Query: 121 SHDMMTTTLD 130
           +  M      
Sbjct: 250 ASGMQQFLNQ 259



 Score = 41.0 bits (94), Expect = 0.059,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 20/41 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          + ++  ++ +GLA Q   M  ++ N+AN  T G       +
Sbjct: 1  MSSALWVSKTGLAAQDKAMSAVANNLANVNTNGFKSDRVVF 41


>gi|254508453|ref|ZP_05120573.1| flagellar basal-body rod protein FlgG [Vibrio parahaemolyticus 16]
 gi|219548663|gb|EED25668.1| flagellar basal-body rod protein FlgG [Vibrio parahaemolyticus 16]
          Length = 262

 Score = 53.3 bits (126), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 23/72 (31%)

Query: 55  MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
           +   G       G                     +++  NVNV  E  +M E  R+Y  N
Sbjct: 185 LEPVGQNLYLPTGASGDPQEGVPGFDGFGDIRQSMLETSNVNVTEELVNMIEAQRVYEMN 244

Query: 115 LQTIKQSHDMMT 126
            + I     MM+
Sbjct: 245 SKVISAVDKMMS 256



 Score = 40.2 bits (92), Expect = 0.087,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 19/41 (46%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  +  ++ +GL  Q   +  IS N+ANA T G       +
Sbjct: 1  MHPALWVSKTGLDAQQTNISTISNNLANASTVGYKKSRAVF 41


>gi|108563278|ref|YP_627594.1| flagellar hook protein FlgE [Helicobacter pylori HPAG1]
 gi|217033066|ref|ZP_03438533.1| hypothetical protein HPB128_148g6 [Helicobacter pylori B128]
 gi|254779163|ref|YP_003057268.1| flagellar hook protein FlgE [Helicobacter pylori B38]
 gi|298736574|ref|YP_003729100.1| flagellar hook protein FlgE [Helicobacter pylori B8]
 gi|107837051|gb|ABF84920.1| flagellar hook protein [Helicobacter pylori HPAG1]
 gi|216945210|gb|EEC23895.1| hypothetical protein HPB128_148g6 [Helicobacter pylori B128]
 gi|254001074|emb|CAX29021.1| Flagellar hook protein FlgE [Helicobacter pylori B38]
 gi|298355764|emb|CBI66636.1| flagellar hook protein FlgE [Helicobacter pylori B8]
 gi|317009123|gb|ADU79703.1| flagellar hook protein FlgE [Helicobacter pylori India7]
 gi|317012675|gb|ADU83283.1| flagellar hook protein FlgE [Helicobacter pylori Lithuania75]
          Length = 718

 Score = 53.3 bits (126), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 13/85 (15%), Positives = 34/85 (40%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            + +  +   GG    + G      +   + G   + +   ++  NV++     ++    
Sbjct: 634 FANDAGLQALGGNVFSQTGNSGQALIGAANTGRRGSISGSKLESSNVDLSRSLTNLIVVQ 693

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R + AN + +  S  ++ T L+L +
Sbjct: 694 RGFQANSKAVTTSDQILNTLLNLKQ 718



 Score = 34.8 bits (78), Expect = 4.0,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 16/33 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ S     +G+      + I S NIAN  TTG
Sbjct: 1  MLRSLWSGVNGMQAHQIALDIESNNIANVNTTG 33


>gi|83589649|ref|YP_429658.1| hypothetical protein Moth_0797 [Moorella thermoacetica ATCC 39073]
 gi|83572563|gb|ABC19115.1| conserved hypothetical protein [Moorella thermoacetica ATCC 39073]
          Length = 253

 Score = 53.3 bits (126), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 12/60 (20%), Positives = 24/60 (40%)

Query: 71  STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           +    +  P        G ++  NV++  E  DM    R Y AN + I+     +  +++
Sbjct: 188 TAPGAQALPAANFQVKQGWLEESNVDLARELVDMLAVLRSYEANQKVIQTEDQTLAKSVN 247



 Score = 40.6 bits (93), Expect = 0.075,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 32/80 (40%), Gaps = 4/80 (5%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG---- 59
          ++   ++A++G+ VQ  R  +IS N+ANA T G        R       + +  +     
Sbjct: 1  MLRGLYLASTGMLVQEMRQDVISNNLANATTGGFKSAVATVRSFPEMLLQRLEKNQAIPI 60

Query: 60 GVRVKKIGVDQSTFVEEFDP 79
          G     + VD      E  P
Sbjct: 61 GPFSPGVMVDNIYTNTEPGP 80


>gi|332673326|gb|AEE70143.1| flagellar hook protein FlgE [Helicobacter pylori 83]
          Length = 718

 Score = 53.3 bits (126), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 13/85 (15%), Positives = 34/85 (40%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            + +  +   GG    + G      +   + G   + +   ++  NV++     ++    
Sbjct: 634 FANDAGLQALGGNVFSQTGNSGQALIGAANTGRRGSISGSKLESSNVDLSRSLTNLIVVQ 693

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R + AN + +  S  ++ T L+L +
Sbjct: 694 RGFQANSKAVTTSDQILNTLLNLKQ 718



 Score = 34.8 bits (78), Expect = 4.0,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 16/33 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ S     +G+      + I S NIAN  TTG
Sbjct: 1  MLRSLWSGVNGMQAHQIALDIESNNIANVNTTG 33


>gi|317180632|dbj|BAJ58418.1| flagellar hook protein FlgE [Helicobacter pylori F32]
          Length = 718

 Score = 53.3 bits (126), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 13/85 (15%), Positives = 34/85 (40%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            + +  +   GG    + G      +   + G   + +   ++  NV++     ++    
Sbjct: 634 FANDAGLQALGGNVFSQTGNSGQALIGAANTGRRGSISGSKLESSNVDLSRSLTNLIVVQ 693

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R + AN + +  S  ++ T L+L +
Sbjct: 694 RGFQANSKAVTTSDQILNTLLNLKQ 718



 Score = 34.8 bits (78), Expect = 4.0,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 16/33 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ S     +G+      + I S NIAN  TTG
Sbjct: 1  MLRSLWSGVNGMQAHQIALDIESNNIANVNTTG 33


>gi|308063336|gb|ADO05223.1| flagellar hook protein FlgE [Helicobacter pylori Sat464]
          Length = 718

 Score = 53.3 bits (126), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 13/85 (15%), Positives = 34/85 (40%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            + +  +   GG    + G      +   + G   + +   ++  NV++     ++    
Sbjct: 634 FANDAGLQALGGNVFSQTGNSGQALIGAANTGRRGSISGSKLESSNVDLSRSLTNLIVVQ 693

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R + AN + +  S  ++ T L+L +
Sbjct: 694 RGFQANSKAVTTSDQILNTLLNLKQ 718



 Score = 34.8 bits (78), Expect = 4.1,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 16/33 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ S     +G+      + I S NIAN  TTG
Sbjct: 1  MLRSLWSGVNGMQAHQIALDIESNNIANVNTTG 33


>gi|308184654|ref|YP_003928787.1| flagellar hook protein FlgE [Helicobacter pylori SJM180]
 gi|308060574|gb|ADO02470.1| flagellar hook protein FlgE [Helicobacter pylori SJM180]
          Length = 718

 Score = 53.3 bits (126), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 13/85 (15%), Positives = 34/85 (40%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            + +  +   GG    + G      +   + G   + +   ++  NV++     ++    
Sbjct: 634 FANDAGLQALGGNVFSQTGNSGQALIGAANTGRRGSISGSKLESSNVDLSRSLTNLIVVQ 693

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R + AN + +  S  ++ T L+L +
Sbjct: 694 RGFQANSKAVTTSDQILNTLLNLKQ 718



 Score = 34.8 bits (78), Expect = 4.1,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 16/33 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ S     +G+      + I S NIAN  TTG
Sbjct: 1  MLRSLWSGVNGMQAHQIALDIESNNIANVNTTG 33


>gi|261837904|gb|ACX97670.1| flagellar hook protein [Helicobacter pylori 51]
          Length = 718

 Score = 53.3 bits (126), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 13/85 (15%), Positives = 34/85 (40%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            + +  +   GG    + G      +   + G   + +   ++  NV++     ++    
Sbjct: 634 FANDAGLQALGGNVFSQTGNSGQALIGAANTGRRGSISGSKLESSNVDLSRSLTNLIVVQ 693

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R + AN + +  S  ++ T L+L +
Sbjct: 694 RGFQANSKAVTTSDQILNTLLNLKQ 718



 Score = 34.8 bits (78), Expect = 4.0,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 16/33 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ S     +G+      + I S NIAN  TTG
Sbjct: 1  MLRSLWSGVNGMQAHQIALDIESNNIANVNTTG 33


>gi|260574401|ref|ZP_05842405.1| flagellar basal-body rod protein FlgG [Rhodobacter sp. SW2]
 gi|259023297|gb|EEW26589.1| flagellar basal-body rod protein FlgG [Rhodobacter sp. SW2]
          Length = 261

 Score = 53.3 bits (126), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 11/61 (18%), Positives = 24/61 (39%)

Query: 71  STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           +  V             G ++  +V+ + E  ++ +  R Y  N + I  +  M++ T  
Sbjct: 200 AAIVGTPGQDGLGTLRQGYLEESSVDAVREVTELIKAQRGYELNAKVITAADQMLSATTQ 259

Query: 131 L 131
           L
Sbjct: 260 L 260



 Score = 46.8 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 22/41 (53%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          + +  IA SG+A Q  R+ ++S N+AN  TTG       + 
Sbjct: 1  MNALQIAASGMAAQQMRVDVVSNNLANMSTTGYNARRADFA 41


>gi|89056664|ref|YP_512115.1| hypothetical protein Jann_4173 [Jannaschia sp. CCS1]
 gi|88866213|gb|ABD57090.1| flagellar hook protein FlgE putative [Jannaschia sp. CCS1]
          Length = 452

 Score = 53.3 bits (126), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 23/44 (52%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++    +V  E   + +T R Y +N + I+   +M+  T +++R
Sbjct: 409 LEESTTDVAAELTQLIQTQRAYSSNAKIIQTVDEMLQETTNIIR 452



 Score = 39.5 bits (90), Expect = 0.16,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 33/64 (51%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            + +S +   +GL+V ++R+  I++NIAN+ T G    +  +    I      + +GGV
Sbjct: 14 MTISSSLNAGVAGLSVNASRLATIADNIANSGTNGYKRATADFSSMVIDQGGGTYSAGGV 73

Query: 62 RVKK 65
          RV  
Sbjct: 74 RVTT 77


>gi|89067517|ref|ZP_01155030.1| flagellar hook protein FlgE, putative [Oceanicola granulosus
           HTCC2516]
 gi|89047086|gb|EAR53140.1| flagellar hook protein FlgE, putative [Oceanicola granulosus
           HTCC2516]
          Length = 433

 Score = 53.3 bits (126), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 23/44 (52%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++    +V  E  ++ +T R Y +N + I+   +M+  T ++ R
Sbjct: 390 LEESATDVAGELTELIQTQRAYSSNAKVIQTVDEMLQETTNIKR 433



 Score = 42.6 bits (98), Expect = 0.020,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 34/64 (53%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            + +S + + +GL   ++R+  I++NIAN+ T G    +  +    ++  E  + +GGV
Sbjct: 1  MTISSSLNASVAGLTANASRLATIADNIANSSTFGYKRATTDFHSMVLNTTEGTYSAGGV 60

Query: 62 RVKK 65
          RV  
Sbjct: 61 RVTT 64


>gi|291334316|gb|ADD93977.1| flagellar basal body rod protein FlgG [uncultured marine bacterium
           MedDCM-OCT-S09-C247]
          Length = 257

 Score = 53.3 bits (126), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 42/114 (36%), Gaps = 2/114 (1%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFV 74
           L   +  + + +  I +    G+    +  +    +F      +       +   +S   
Sbjct: 138 LPADATSINVSTTGIVSVTEPGNDIAQEVGQISIANFSNPRGLTPIGENFFVPSAESGVA 197

Query: 75  EEFDPGH--PVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           +E  P          G V+  NVNV+ +  DM ET R Y  + ++I    +MM 
Sbjct: 198 QEGAPLDGGFGKVLQGYVESSNVNVVQQLVDMIETQRAYEVSSKSITAVDEMMQ 251



 Score = 41.8 bits (96), Expect = 0.030,   Method: Composition-based stats.
 Identities = 14/37 (37%), Positives = 21/37 (56%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
           H+A +GL  Q  +MQ+I+ N+AN  TTG       +
Sbjct: 1  MHVAKTGLNAQQYKMQVIANNLANVNTTGFKRDRANF 37


>gi|262273529|ref|ZP_06051343.1| flagellar hook protein FlgE [Grimontia hollisae CIP 101886]
 gi|262222507|gb|EEY73818.1| flagellar hook protein FlgE [Grimontia hollisae CIP 101886]
          Length = 401

 Score = 53.3 bits (126), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/83 (20%), Positives = 31/83 (37%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
               +E +  +GG R  +     +    +   G   A   G  +  NV++  E   +   
Sbjct: 317 RFPNQEGLQQAGGTRWTESFSSGTALFGQPGTGQFGALRVGAYESSNVDLTEEMVSLMSA 376

Query: 108 NRLYMANLQTIKQSHDMMTTTLD 130
              Y AN +TI+ S +M+     
Sbjct: 377 QSNYQANAKTIQASQEMVQILFQ 399



 Score = 35.2 bits (79), Expect = 2.9,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 19/39 (48%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          S +I  SGL   S ++  IS NI+N  T G       ++
Sbjct: 2  SINIGLSGLRATSDQINTISHNISNVGTVGYKSSRTEFQ 40


>gi|210135063|ref|YP_002301502.1| flagellar hook protein FlgE [Helicobacter pylori P12]
 gi|210133031|gb|ACJ08022.1| flagellar hook protein [Helicobacter pylori P12]
          Length = 718

 Score = 53.3 bits (126), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 13/85 (15%), Positives = 34/85 (40%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            + +  +   GG    + G      +   + G   + +   ++  NV++     ++    
Sbjct: 634 FANDAGLQALGGNVFSQTGNSGQALIGAANTGRRGSISGSKLESSNVDLSRSLTNLIVVQ 693

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R + AN + +  S  ++ T L+L +
Sbjct: 694 RGFQANSKAVTTSDQILNTLLNLKQ 718



 Score = 34.8 bits (78), Expect = 4.1,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 16/33 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ S     +G+      + I S NIAN  TTG
Sbjct: 1  MLRSLWSGVNGMQAHQIALDIESNNIANVNTTG 33


>gi|148554189|ref|YP_001261771.1| flagellar basal body FlaE domain-containing protein [Sphingomonas
           wittichii RW1]
 gi|148499379|gb|ABQ67633.1| flagellar basal body FlaE domain protein [Sphingomonas wittichii
           RW1]
          Length = 435

 Score = 53.3 bits (126), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/83 (21%), Positives = 35/83 (42%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            S  E +   G  +    G+     + E          SG ++  NV++  E   + +  
Sbjct: 351 FSNPEGLRQLGDSKWGATGLSGEPIIGEASSNGTGQIQSGALEQANVDITEELVALIQAQ 410

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R + AN +TI+ ++ M  T ++L
Sbjct: 411 RNFSANAKTIEAANTMTQTIVNL 433



 Score = 35.6 bits (80), Expect = 2.6,   Method: Composition-based stats.
 Identities = 17/58 (29%), Positives = 22/58 (37%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          S + A SGL      + +IS NIAN  TTG       +     S      G  G   +
Sbjct: 2  SFYTALSGLKASQTDLAVISNNIANVGTTGFKRSGTEFGDLVSSSPMQSSGIAGQGTR 59


>gi|167644975|ref|YP_001682638.1| hypothetical protein Caul_1010 [Caulobacter sp. K31]
 gi|167347405|gb|ABZ70140.1| protein of unknown function DUF1078 domain protein [Caulobacter sp.
           K31]
          Length = 556

 Score = 53.3 bits (126), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/129 (17%), Positives = 41/129 (31%), Gaps = 12/129 (9%)

Query: 17  VQSARMQIIS-ENIANAR-----------TTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           VQS      +  N+ N               G T         T S    + G  G   +
Sbjct: 428 VQSVNTNGTAFGNLTNIEVDDKGYVSAIFDNGVTRRIAQVAIATFSNPNGLKGVNGNAYR 487

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
                 +  ++    G   + A   ++   V++  E   +  T R Y A+ + I  +  M
Sbjct: 488 VTNESGTYSLKTPGGGGAGSIAPSTLEASTVDLSTEFTGLITTQRAYSASSKIITTADQM 547

Query: 125 MTTTLDLLR 133
           +   L + R
Sbjct: 548 LEELLSIKR 556


>gi|600725|gb|AAA92803.1| flagellar hook FlgE [Helicobacter pylori]
          Length = 718

 Score = 53.3 bits (126), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 13/85 (15%), Positives = 34/85 (40%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            + +  +   GG    + G      +   + G   + +   ++  NV++     ++    
Sbjct: 634 FANDAGLQALGGNVFSQTGNSGQALIGAANTGRRGSISGSKLESSNVDLSRSLTNLIVVQ 693

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R + AN + +  S  ++ T L+L +
Sbjct: 694 RGFQANSKAVTTSDQILNTLLNLKQ 718



 Score = 34.8 bits (78), Expect = 4.1,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 16/33 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ S     +G+      + I S NIAN  TTG
Sbjct: 1  MLRSLWSGVNGMQAHQIALDIESNNIANVNTTG 33


>gi|261839317|gb|ACX99082.1| flagellar hook protein FlgE [Helicobacter pylori 52]
 gi|317178772|dbj|BAJ56560.1| flagellar hook protein FlgE [Helicobacter pylori F30]
          Length = 718

 Score = 53.3 bits (126), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 13/85 (15%), Positives = 34/85 (40%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            + +  +   GG    + G      +   + G   + +   ++  NV++     ++    
Sbjct: 634 FANDAGLQALGGNVFSQTGNSGQALIGAANTGRRGSISGSKLESSNVDLSRSLTNLIVVQ 693

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R + AN + +  S  ++ T L+L +
Sbjct: 694 RGFQANSKAVTTSDQILNTLLNLKQ 718



 Score = 34.8 bits (78), Expect = 4.1,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 16/33 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ S     +G+      + I S NIAN  TTG
Sbjct: 1  MLRSLWSGVNGMQAHQIALDIESNNIANVNTTG 33


>gi|167567750|ref|ZP_02360666.1| flagellar hook protein flgE [Burkholderia oklahomensis EO147]
          Length = 395

 Score = 53.3 bits (126), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 19/41 (46%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           ++  N +V  E  DM    R Y AN + I   + MM + + 
Sbjct: 353 LEMSNADVTRELVDMMSAQRNYQANSKVIATENQMMQSLMQ 393



 Score = 36.4 bits (82), Expect = 1.3,   Method: Composition-based stats.
 Identities = 14/39 (35%), Positives = 20/39 (51%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          S +IA SG+   + ++  IS NIAN  T G   G   + 
Sbjct: 2  SFNIALSGINAVNNQLNTISHNIANTGTYGFKSGRANFA 40


>gi|322432975|ref|YP_004210224.1| flagellar basal-body rod protein FlgG [Acidobacterium sp. MP5ACTX9]
 gi|321165202|gb|ADW70906.1| flagellar basal-body rod protein FlgG [Acidobacterium sp. MP5ACTX9]
          Length = 263

 Score = 53.3 bits (126), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/133 (13%), Positives = 38/133 (28%), Gaps = 4/133 (3%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
           + L  +  I      +       +S        T  +      +         ++  G  
Sbjct: 134 NPLQPAITIPPDATNITIGSDGTVS---VVQPGTTQSAQIGSIQMALFVNPGGLNSVGNN 190

Query: 62  RVKKIGVDQSTFVEEFD-PGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
                       +              G ++  NV+V+ E  +M    R Y +N + +K 
Sbjct: 191 IYLATTASGDPIIGTPGGSEGLGTIQQGTLEASNVSVVDEFVEMIVAQRSYESNSRVVKA 250

Query: 121 SHDMMTTTLDLLR 133
           + +MM     L +
Sbjct: 251 ADEMMQQLNQLSQ 263



 Score = 40.2 bits (92), Expect = 0.10,   Method: Composition-based stats.
 Identities = 14/91 (15%), Positives = 26/91 (28%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I + + A SG+  Q   +  I+ N+AN+ TTG       +             +   + 
Sbjct: 1  MIRALYTAASGMTAQQLNLDNIANNLANSSTTGFQQRRLAFSDMLYQNTTSPGSAATQQT 60

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIVKYPN 94
                Q            +          N
Sbjct: 61 TNAAGLQVGLGVRPTSTETIQTQGDFNSTGN 91


>gi|167628970|ref|YP_001679469.1| flagellar basal-body rod protein, putative [Heliobacterium
           modesticaldum Ice1]
 gi|167591710|gb|ABZ83458.1| flagellar basal-body rod protein, putative [Heliobacterium
           modesticaldum Ice1]
          Length = 267

 Score = 53.3 bits (126), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/102 (22%), Positives = 37/102 (36%), Gaps = 14/102 (13%)

Query: 34  TTGDTPGSDPYRRKTISFEEVMHGSG-GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKY 92
              +TPG  P   K       ++  G G  V+ + + +                SG ++ 
Sbjct: 177 GYDETPGQAPPLVKAGDSLYRLNEQGDGGGVRDLAIGEREIR------------SGALEL 224

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT-LDLLR 133
            NVNV+ E   M    R Y AN + I+     +     +L R
Sbjct: 225 ANVNVVQEMVQMISAARAYEANQKAIQSQDGTLEKACTELGR 266



 Score = 41.0 bits (94), Expect = 0.058,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 18/42 (42%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          +I   + + SG+ VQ     + + N+AN  T         +R
Sbjct: 1  MIRGLYTSASGMLVQQTNQDVTANNLANVNTVSFKKDRAVFR 42


>gi|217034494|ref|ZP_03439905.1| hypothetical protein HP9810_873g10 [Helicobacter pylori 98-10]
 gi|216943035|gb|EEC22514.1| hypothetical protein HP9810_873g10 [Helicobacter pylori 98-10]
          Length = 718

 Score = 53.3 bits (126), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 13/85 (15%), Positives = 34/85 (40%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            + +  +   GG    + G      +   + G   + +   ++  NV++     ++    
Sbjct: 634 FANDAGLQALGGNVFSQTGNSGQALIGAANTGRRGSISGSKLESSNVDLSRSLTNLIVVQ 693

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R + AN + +  S  ++ T L+L +
Sbjct: 694 RGFQANSKAVTTSDQILNTLLNLKQ 718



 Score = 34.8 bits (78), Expect = 4.3,   Method: Composition-based stats.
 Identities = 12/33 (36%), Positives = 16/33 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          +I S     +G+      + I S NIAN  TTG
Sbjct: 1  MIRSLWSGVNGMQAHQIALDIESNNIANVNTTG 33


>gi|167626155|ref|YP_001676449.1| flagellar hook protein FlgE [Shewanella halifaxensis HAW-EB4]
 gi|167356177|gb|ABZ78790.1| flagellar basal body FlaE domain protein [Shewanella halifaxensis
           HAW-EB4]
          Length = 402

 Score = 53.3 bits (126), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 11/59 (18%), Positives = 23/59 (38%)

Query: 72  TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             +     G   + A G ++  NV+   E  ++    R Y +N + +  +  M    L+
Sbjct: 342 PIIGTPTTGTLGSIAGGYLEGSNVDQTAEMVNLMTAQRNYQSNAKVLDTNSTMQQALLN 400



 Score = 38.7 bits (88), Expect = 0.30,   Method: Composition-based stats.
 Identities = 15/38 (39%), Positives = 20/38 (52%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          S +IA SGL   +  +  IS NIAN+ T G   G   +
Sbjct: 2  SFNIALSGLQATTQDLNTISNNIANSSTVGFRSGRSEF 39


>gi|320538206|ref|ZP_08038101.1| fagellar hook-basal body protein [Treponema phagedenis F0421]
 gi|320145023|gb|EFW36744.1| fagellar hook-basal body protein [Treponema phagedenis F0421]
          Length = 452

 Score = 53.3 bits (126), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 15/44 (34%), Positives = 25/44 (56%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  NV++  +  DM  T R + A  +TI+ S  M+ T L+L R
Sbjct: 409 LEMSNVDLTDQFTDMIITQRGFQAGAKTIQTSDTMLETVLNLKR 452


>gi|317177302|dbj|BAJ55091.1| flagellar hook protein FlgE [Helicobacter pylori F16]
          Length = 718

 Score = 53.3 bits (126), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 13/85 (15%), Positives = 34/85 (40%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            + +  +   GG    + G      +   + G   + +   ++  NV++     ++    
Sbjct: 634 FANDAGLQALGGNVFSQTGNSGQALIGAANTGRRGSISGSKLESSNVDLSRSLTNLIVVQ 693

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R + AN + +  S  ++ T L+L +
Sbjct: 694 RGFQANSKAVTTSDQILNTLLNLKQ 718



 Score = 34.8 bits (78), Expect = 4.2,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 16/33 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ S     +G+      + I S NIAN  TTG
Sbjct: 1  MLRSLWSGVNGMQAHQIALDIESNNIANVNTTG 33


>gi|317011083|gb|ADU84830.1| flagellar hook protein FlgE [Helicobacter pylori SouthAfrica7]
          Length = 718

 Score = 53.3 bits (126), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 13/85 (15%), Positives = 34/85 (40%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            + +  +   GG    + G      +   + G   + +   ++  NV++     ++    
Sbjct: 634 FANDAGLQALGGNVFSQTGNSGQALIGAANTGRRGSISGSKLESSNVDLSRSLTNLIVVQ 693

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R + AN + +  S  ++ T L+L +
Sbjct: 694 RGFQANSKAVTTSDQILNTLLNLKQ 718



 Score = 34.8 bits (78), Expect = 4.2,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 16/33 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ S     +G+      + I S NIAN  TTG
Sbjct: 1  MLRSLWSGVNGMQAHQIALDIESNNIANVNTTG 33


>gi|297380070|gb|ADI34957.1| flagellar hook protein FlgE [Helicobacter pylori v225d]
 gi|315586465|gb|ADU40846.1| flagellar hook protein FlgE [Helicobacter pylori 35A]
 gi|317182178|dbj|BAJ59962.1| flagellar hook protein FlgE [Helicobacter pylori F57]
          Length = 718

 Score = 53.3 bits (126), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 13/85 (15%), Positives = 34/85 (40%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            + +  +   GG    + G      +   + G   + +   ++  NV++     ++    
Sbjct: 634 FANDAGLQALGGNVFSQTGNSGQALIGAANTGRRGSISGSKLESSNVDLSRSLTNLIVVQ 693

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R + AN + +  S  ++ T L+L +
Sbjct: 694 RGFQANSKAVTTSDQILNTLLNLKQ 718



 Score = 34.8 bits (78), Expect = 4.2,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 16/33 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ S     +G+      + I S NIAN  TTG
Sbjct: 1  MLRSLWSGVNGMQAHQIALDIESNNIANVNTTG 33


>gi|293605003|ref|ZP_06687399.1| flagellar hook protein FlgE [Achromobacter piechaudii ATCC 43553]
 gi|292816608|gb|EFF75693.1| flagellar hook protein FlgE [Achromobacter piechaudii ATCC 43553]
          Length = 489

 Score = 53.3 bits (126), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 21/128 (16%), Positives = 40/128 (31%), Gaps = 13/128 (10%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
            +  +I   G         +++       T G+T           S  + +   G     
Sbjct: 375 FSGINIGGDG--------SLVAS-----YTNGETQVVGNIVLADFSNLQGLQPVGNNAWT 421

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           +        + +              +  NV++  E  +M    R Y AN QTIK   ++
Sbjct: 422 ETSASGQPILGQPGTNGMSRVVGQATEASNVDMSKELVNMIIAQRTYQANSQTIKTQDEI 481

Query: 125 MTTTLDLL 132
           M   ++L 
Sbjct: 482 MQVLMNLK 489


>gi|188527285|ref|YP_001909972.1| flagellar hook protein FlgE [Helicobacter pylori Shi470]
 gi|188143525|gb|ACD47942.1| flagellar hook protein FlgE [Helicobacter pylori Shi470]
 gi|308062194|gb|ADO04082.1| flagellar hook protein FlgE [Helicobacter pylori Cuz20]
          Length = 718

 Score = 53.3 bits (126), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 13/85 (15%), Positives = 34/85 (40%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            + +  +   GG    + G      +   + G   + +   ++  NV++     ++    
Sbjct: 634 FANDAGLQALGGNVFSQTGNSGQALIGAANTGRRGSISGSKLESSNVDLSRSLTNLIVVQ 693

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R + AN + +  S  ++ T L+L +
Sbjct: 694 RGFQANSKAVTTSDQILNTLLNLKQ 718



 Score = 34.8 bits (78), Expect = 4.2,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 16/33 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ S     +G+      + I S NIAN  TTG
Sbjct: 1  MLRSLWSGVNGMQAHQIALDIESNNIANVNTTG 33


>gi|308183024|ref|YP_003927151.1| flagellar hook protein FlgE [Helicobacter pylori PeCan4]
 gi|308065209|gb|ADO07101.1| flagellar hook protein FlgE [Helicobacter pylori PeCan4]
          Length = 718

 Score = 53.3 bits (126), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 13/85 (15%), Positives = 34/85 (40%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            + +  +   GG    + G      +   + G   + +   ++  NV++     ++    
Sbjct: 634 FANDAGLQALGGNVFSQTGNSGQALIGAANTGRRGSISGSKLESSNVDLSRSLTNLIVVQ 693

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R + AN + +  S  ++ T L+L +
Sbjct: 694 RGFQANSKAVTTSDQILNTLLNLKQ 718



 Score = 34.8 bits (78), Expect = 4.3,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 16/33 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ S     +G+      + I S NIAN  TTG
Sbjct: 1  MLRSLWSGVNGMQAHQIALDIESNNIANVNTTG 33


>gi|208434779|ref|YP_002266445.1| flagellar hook protein [Helicobacter pylori G27]
 gi|208432708|gb|ACI27579.1| flagellar hook protein [Helicobacter pylori G27]
          Length = 718

 Score = 53.3 bits (126), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 13/85 (15%), Positives = 34/85 (40%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            + +  +   GG    + G      +   + G   + +   ++  NV++     ++    
Sbjct: 634 FANDAGLQALGGNVFSQTGNSGQALIGAANTGRRGSISGSKLESSNVDLSRSLTNLIVVQ 693

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R + AN + +  S  ++ T L+L +
Sbjct: 694 RGFQANSKAVTTSDQILNTLLNLKQ 718



 Score = 34.8 bits (78), Expect = 4.2,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 16/33 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ S     +G+      + I S NIAN  TTG
Sbjct: 1  MLRSLWSGVNGMQAHQIALDIESNNIANVNTTG 33


>gi|30248322|ref|NP_840392.1| flagellar hook protein FlgE [Nitrosomonas europaea ATCC 19718]
 gi|30138208|emb|CAD84216.1| Flagella basal body rod protein [Nitrosomonas europaea ATCC 19718]
          Length = 410

 Score = 53.3 bits (126), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/83 (21%), Positives = 34/83 (40%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            S    +   G  +  +        V   + G   +  S  V+  NV++  E   +  T 
Sbjct: 328 FSNPNGLKPLGSNQWGETAESGLPLVGTPETGVLGSLQSSAVEESNVDLTTELVTLIMTQ 387

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R+Y AN +TI+    +M T +++
Sbjct: 388 RVYQANAKTIETQDAVMQTIMNI 410


>gi|15964432|ref|NP_384785.1| flagellar hook protein FlgE [Sinorhizobium meliloti 1021]
 gi|307311574|ref|ZP_07591215.1| fagellar hook-basal body protein [Sinorhizobium meliloti BL225C]
 gi|20141447|sp|Q9X5Y0|FLGE_RHIME RecName: Full=Flagellar hook protein flgE
 gi|15073609|emb|CAC45251.1| Flagellar hook protein [Sinorhizobium meliloti 1021]
 gi|306899591|gb|EFN30220.1| fagellar hook-basal body protein [Sinorhizobium meliloti BL225C]
          Length = 406

 Score = 53.3 bits (126), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 15/84 (17%), Positives = 30/84 (35%)

Query: 50  SFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNR 109
              + +    G    +              G      SG ++  NV++  E   M E+ R
Sbjct: 323 QSPDKLRPESGNVYSQGVDSGVIITGFAGSGDFGEILSGALESSNVDIAEELTAMIESQR 382

Query: 110 LYMANLQTIKQSHDMMTTTLDLLR 133
            Y AN +  +   +++   ++L R
Sbjct: 383 NYTANSKVFQTGSELLEVLVNLKR 406



 Score = 49.5 bits (116), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 20/64 (31%), Positives = 30/64 (46%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            L  +     SG+  QS R+  ++ENIANA TTG    S  +    +      + SGGV
Sbjct: 1  MSLYGTMRTGVSGMNAQSNRLSTVAENIANANTTGYKRASTEFSSMILPSGNGSYNSGGV 60

Query: 62 RVKK 65
          + + 
Sbjct: 61 QTEV 64


>gi|226944492|ref|YP_002799565.1| flagellar basal body rod protein [Azotobacter vinelandii DJ]
 gi|226719419|gb|ACO78590.1| Flagellar basal body rod protein [Azotobacter vinelandii DJ]
          Length = 383

 Score = 53.3 bits (126), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/86 (19%), Positives = 34/86 (39%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
           T    E +   G     +        V     G   +  SG+V+  NV++  E  ++   
Sbjct: 298 TFRSPEGLQPVGDNAWVETAASGQPLVGTAGNGQFGSLESGVVEASNVDLTKELVNLIIA 357

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R + AN Q++    +++   ++L R
Sbjct: 358 QRNFQANAQSVSTQSEVLEQAVNLGR 383



 Score = 35.2 bits (79), Expect = 2.9,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 29/72 (40%), Gaps = 4/72 (5%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
              A SGL   S+ + ++S NIAN++T G    +  +               GV+V  +
Sbjct: 2  GFSQALSGLNAASSNLNVVSNNIANSQTVGFKSSTTQFA----DVYASSRVGLGVQVAGV 57

Query: 67 GVDQSTFVEEFD 78
            + ++   E  
Sbjct: 58 VQNFTSGNLETT 69


>gi|254463756|ref|ZP_05077167.1| flagellar basal-body rod protein FlgG [Rhodobacterales bacterium
           Y4I]
 gi|206684664|gb|EDZ45146.1| flagellar basal-body rod protein FlgG [Rhodobacterales bacterium
           Y4I]
          Length = 261

 Score = 53.3 bits (126), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 13/82 (15%), Positives = 26/82 (31%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +  + +   G     +     +  V             G ++  +V+ + E  ++ E  
Sbjct: 178 FTNPKGLEAIGSNLFTETEASGAATVTTAGEDGLGTLRQGYLEGSSVDAVREVTELIEAQ 237

Query: 109 RLYMANLQTIKQSHDMMTTTLD 130
           R Y  N + I     MM  T  
Sbjct: 238 RGYEMNAKVISAVDQMMGATTQ 259



 Score = 45.2 bits (105), Expect = 0.003,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 21/41 (51%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          + +  IA +G++ Q  R++ IS N+AN  TT        + 
Sbjct: 1  MRALKIAATGMSAQQLRVETISNNLANMNTTAYNARRAEFA 41


>gi|292489133|ref|YP_003532020.1| flagellar hook protein FlgE [Erwinia amylovora CFBP1430]
 gi|292900252|ref|YP_003539621.1| flagellar hook protein [Erwinia amylovora ATCC 49946]
 gi|291200100|emb|CBJ47226.1| flagellar hook protein [Erwinia amylovora ATCC 49946]
 gi|291554567|emb|CBA22181.1| Flagellar hook protein flgE [Erwinia amylovora CFBP1430]
 gi|312173291|emb|CBX81546.1| Flagellar hook protein flgE [Erwinia amylovora ATCC BAA-2158]
          Length = 410

 Score = 53.3 bits (126), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 33/77 (42%)

Query: 55  MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
           +  +G     +      + +     G   +   G ++  NV++  E  +M    R Y +N
Sbjct: 333 LQQNGNNTWVESPQSGGSIIGTAGSGSFGSLTGGALENSNVDLGSEMVNMIVYQRNYQSN 392

Query: 115 LQTIKQSHDMMTTTLDL 131
            QTIK   +M+ T ++L
Sbjct: 393 SQTIKTQSEMLQTLVNL 409


>gi|294140187|ref|YP_003556165.1| flagellar basal-body rod protein FlgG [Shewanella violacea DSS12]
 gi|293326656|dbj|BAJ01387.1| flagellar basal-body rod protein FlgG [Shewanella violacea DSS12]
          Length = 262

 Score = 53.3 bits (126), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 27/78 (34%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +   G     + G   +            A   G ++  NVNV  E  ++ E+ 
Sbjct: 179 FINPSGLDPMGQNLYLETGASGTPIQGTASLDGMGAIRQGALETSNVNVTEELVNLIESQ 238

Query: 109 RLYMANLQTIKQSHDMMT 126
           R+Y  N + I     M++
Sbjct: 239 RIYEMNSKVISAVDQMLS 256



 Score = 39.1 bits (89), Expect = 0.19,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  +  I+ +GL  Q   + +IS N+ANA T G       +
Sbjct: 1  MHPALWISKTGLDAQQTDISVISNNVANASTIGYKKSRAVF 41


>gi|253998488|ref|YP_003050551.1| flagellar hook protein FlgE [Methylovorus sp. SIP3-4]
 gi|253985167|gb|ACT50024.1| flagellar basal body FlaE domain protein [Methylovorus sp. SIP3-4]
          Length = 402

 Score = 53.3 bits (126), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/84 (20%), Positives = 31/84 (36%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
             +    +   G  +  +        + +   G      S   +  NV++  E  +M   
Sbjct: 318 KFANPNGLAALGNNQFAETSDAGVPVIGKAGTGGLGVLQSSATEDSNVDLTAELVNMITA 377

Query: 108 NRLYMANLQTIKQSHDMMTTTLDL 131
            R Y AN QTIK    ++ T ++L
Sbjct: 378 QRYYQANAQTIKTQDQVLQTLVNL 401



 Score = 36.4 bits (82), Expect = 1.3,   Method: Composition-based stats.
 Identities = 19/93 (20%), Positives = 29/93 (31%), Gaps = 5/93 (5%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          S     SGL   S  + +I  N+ANA T G       +     +              K+
Sbjct: 2  SFQQGLSGLNAASKSLDVIGNNVANANTVGFKQSRAEFADVYANALNGSGTGSAGIGVKV 61

Query: 67 GVDQSTFVE-----EFDPGHPVANASGIVKYPN 94
             Q  F +       +P     N +G  +  N
Sbjct: 62 ADIQRQFTQGNITNTENPLDIAINGNGFFRLSN 94


>gi|203287743|ref|YP_002222758.1| flagellar hook protein [Borrelia recurrentis A1]
 gi|201084963|gb|ACH94537.1| flagellar hook protein [Borrelia recurrentis A1]
          Length = 441

 Score = 53.3 bits (126), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 22/43 (51%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           ++  NV++  +  DM  T R + AN +TI  S  ++   + L 
Sbjct: 398 LEMANVDLAEQFTDMIVTQRGFQANAKTITTSDQLLQELVRLK 440



 Score = 37.9 bits (86), Expect = 0.44,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 20/42 (47%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S +   SGL     RM ++  NI+N  T G   G   ++
Sbjct: 1  MMRSLYSGVSGLQNHQTRMDVVGNNISNVNTVGFKKGRVNFQ 42


>gi|83859391|ref|ZP_00952912.1| flagellar hook protein [Oceanicaulis alexandrii HTCC2633]
 gi|83852838|gb|EAP90691.1| flagellar hook protein [Oceanicaulis alexandrii HTCC2633]
          Length = 465

 Score = 53.3 bits (126), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 24/44 (54%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           V+  NV++  E +++  T R Y A+ + I  + +M+   + + R
Sbjct: 422 VENSNVDIATEFSNLIITQRAYSASSRIITTADEMLAEAIQMKR 465



 Score = 34.1 bits (76), Expect = 7.4,   Method: Composition-based stats.
 Identities = 15/87 (17%), Positives = 24/87 (27%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            + ++     SGL   S+ +  IS+NIAN  T G       +                 
Sbjct: 1  MSINSAMAAGASGLIANSSALAAISDNIANVNTVGYKRVDTIFTPNYKIGGGGETRYASS 60

Query: 62 RVKKIGVDQSTFVEEFDPGHPVANASG 88
           V               PG    + + 
Sbjct: 61 GVSSNSRLDVNSSGLLTPGVSATDMAI 87


>gi|315636308|ref|ZP_07891558.1| flagellar hook protein FlgE [Arcobacter butzleri JV22]
 gi|315479397|gb|EFU70080.1| flagellar hook protein FlgE [Arcobacter butzleri JV22]
          Length = 723

 Score = 53.3 bits (126), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 10/74 (13%), Positives = 29/74 (39%)

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           G    +   +    +   +  +        ++    ++     ++    R + AN ++I 
Sbjct: 650 GNNNFQATQESGKAIYSTNNNNTAGMQGKTLELSEADLSESLVNLMVFQRAFEANAKSIT 709

Query: 120 QSHDMMTTTLDLLR 133
            + +M+TT ++L R
Sbjct: 710 TADEMLTTLINLKR 723


>gi|259907634|ref|YP_002647990.1| Flagellar hook protein FlgE [Erwinia pyrifoliae Ep1/96]
 gi|224963256|emb|CAX54740.1| Flagellar hook protein FlgE [Erwinia pyrifoliae Ep1/96]
 gi|283477476|emb|CAY73392.1| flgE [Erwinia pyrifoliae DSM 12163]
          Length = 410

 Score = 53.3 bits (126), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 33/77 (42%)

Query: 55  MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
           +  +G     +      + +     G   +   G ++  NV++  E  +M    R Y +N
Sbjct: 333 LQQNGNNTWVESPQSGGSIIGTAGTGSFGSLTGGALENSNVDLGSEMVNMIVYQRNYQSN 392

Query: 115 LQTIKQSHDMMTTTLDL 131
            QTIK   +M+ T ++L
Sbjct: 393 SQTIKTQSEMLQTLVNL 409


>gi|158422258|ref|YP_001523550.1| flagellar basal body rod protein FlgG [Azorhizobium caulinodans ORS
           571]
 gi|158329147|dbj|BAF86632.1| flagellar basal-body rod FlgG protein [Azorhizobium caulinodans ORS
           571]
          Length = 262

 Score = 53.3 bits (126), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 13/76 (17%), Positives = 26/76 (34%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            + E  M   G    ++        V             G ++  NV+ + E  ++    
Sbjct: 178 FANESGMEPLGNNLYRETLASGQPIVGVAGDVGFGKIQQGYLEASNVDPVKEITELIAAQ 237

Query: 109 RLYMANLQTIKQSHDM 124
           R Y  N + I+ + +M
Sbjct: 238 RSYEMNSKVIQAADEM 253



 Score = 42.6 bits (98), Expect = 0.020,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 24/64 (37%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          + +  IA +G+  Q   +++I+ NIAN  TTG       +       E           +
Sbjct: 1  MRALAIAATGMNAQQTNVEVIANNIANINTTGFKRARAEFSDLLYQSERTQGIPNRDGGQ 60

Query: 65 KIGV 68
           I  
Sbjct: 61 AIPE 64


>gi|119953082|ref|YP_945291.1| flagellar hook protein FlgE [Borrelia turicatae 91E135]
 gi|119861853|gb|AAX17621.1| flagellar hook protein FlgE [Borrelia turicatae 91E135]
          Length = 442

 Score = 53.3 bits (126), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 22/43 (51%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           ++  NV++  +  DM  T R + AN +TI  S  ++   + L 
Sbjct: 399 LEMANVDLAEQFTDMIVTQRGFQANAKTITTSDQLLQELVRLK 441



 Score = 40.2 bits (92), Expect = 0.10,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 20/42 (47%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S +   SGL     RM ++  NIAN  T G   G   ++
Sbjct: 1  MMRSLYSGVSGLQNHQTRMDVVGNNIANVNTIGFKKGRVNFQ 42


>gi|144900453|emb|CAM77317.1| Flagellar hook protein FlgE [Magnetospirillum gryphiswaldense
           MSR-1]
          Length = 693

 Score = 53.3 bits (126), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 13/86 (15%), Positives = 25/86 (29%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
           T      M    G             +            +  ++   V++  E   M  T
Sbjct: 608 TFVNPNGMQSLSGNVFIGTDFSGEPTLRGAGSAGAGQINASSLEASTVDIGEEFTTMIVT 667

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y A  + I  + +M+   + + R
Sbjct: 668 QRAYSAAAKIITTADEMLDELVRIKR 693



 Score = 35.2 bits (79), Expect = 3.2,   Method: Composition-based stats.
 Identities = 17/59 (28%), Positives = 24/59 (40%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
            L  +     SGLA QS+ M  IS+NI+N  T G       ++        +   S G
Sbjct: 1  MSLYGALFSGVSGLASQSSAMGAISDNISNVNTVGYKGARVNFQTLVTKQTSITAYSPG 59


>gi|291538503|emb|CBL11614.1| fagellar hook-basal body proteins [Roseburia intestinalis XB6B4]
          Length = 547

 Score = 53.3 bits (126), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 26/62 (41%)

Query: 72  TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             +         +  SG ++  NV++  E   M  T R + AN + I  S  ++   ++L
Sbjct: 486 DGIGVEISADGSSMTSGELEMSNVDLSTEFTQMIITQRGFQANSRIITTSDTLLEELVNL 545

Query: 132 LR 133
            R
Sbjct: 546 KR 547



 Score = 34.5 bits (77), Expect = 5.1,   Method: Composition-based stats.
 Identities = 12/38 (31%), Positives = 17/38 (44%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
           + A SGL     +M +I  NIAN  T      S  ++
Sbjct: 1  MYSAVSGLKTHQTKMDVIGNNIANVNTVAFKSSSVVFQ 38


>gi|259417939|ref|ZP_05741858.1| flagellar basal-body rod protein FlgG [Silicibacter sp. TrichCH4B]
 gi|259346845|gb|EEW58659.1| flagellar basal-body rod protein FlgG [Silicibacter sp. TrichCH4B]
          Length = 261

 Score = 53.3 bits (126), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 13/82 (15%), Positives = 26/82 (31%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +  + +   G    K+          E             ++  +V+ + E  ++ E  
Sbjct: 178 FTNPKGLEAVGSNLFKQTEASGQPNTTEPGADGVGTLRQKYLEDSSVDAVREITELIEAQ 237

Query: 109 RLYMANLQTIKQSHDMMTTTLD 130
           R Y  N + I     MM+ T  
Sbjct: 238 RGYEMNSKVISAVDQMMSATTQ 259



 Score = 44.9 bits (104), Expect = 0.004,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 21/41 (51%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          + +  IA +G++ Q  R++ IS N+AN  TT        + 
Sbjct: 1  MRALKIAATGMSAQQLRVETISNNLANMNTTAYNARRAEFA 41


>gi|269836597|ref|YP_003318825.1| hypothetical protein Sthe_0565 [Sphaerobacter thermophilus DSM
           20745]
 gi|269785860|gb|ACZ38003.1| protein of unknown function DUF1078 domain protein [Sphaerobacter
           thermophilus DSM 20745]
          Length = 259

 Score = 53.3 bits (126), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 12/83 (14%), Positives = 28/83 (33%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
             +  + +  +G  R           V         A  SG ++   V++  +   + E 
Sbjct: 174 RFANPQGLAAAGQNRFAATVASGPPQVGTPGADGFPALQSGALEASTVDLAEQMTTLIEA 233

Query: 108 NRLYMANLQTIKQSHDMMTTTLD 130
            R Y  N + ++   +M+   + 
Sbjct: 234 QRAYTVNARALQTLDEMVGLAIQ 256



 Score = 34.8 bits (78), Expect = 4.4,   Method: Composition-based stats.
 Identities = 18/98 (18%), Positives = 28/98 (28%), Gaps = 6/98 (6%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGS------DPYRRKTISFEEVMHG 57
          + +      +GL VQ AR+  ++ N+AN  TTG            P   +          
Sbjct: 1  MTSLYATGANGLRVQQARLDAVANNVANLGTTGFKAARVDMVDMPPQPLEVARAGGAADP 60

Query: 58 SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNV 95
             +         S   E   P          +  PN 
Sbjct: 61 VTEIGEGVTIGGISRVFEPGTPRPTGNPLDVAILGPNT 98


>gi|291334314|gb|ADD93975.1| hypothetical protein [uncultured marine bacterium
           MedDCM-OCT-S09-C247]
          Length = 449

 Score = 53.3 bits (126), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 20/132 (15%), Positives = 44/132 (33%), Gaps = 2/132 (1%)

Query: 2   DYLIASAHIANSGLAVQS-ARMQI-ISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
           D   ++  +   G +      ++I    N+    + G           + + E  +   G
Sbjct: 316 DQPFSAREVTQDGFSAGRLTNLEIDTYGNVQAGYSNGQNVVLGKIMLASFASESGLKQIG 375

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
                         + E          SG ++  NV++  E  ++  + R Y A  + I+
Sbjct: 376 NSTFIATAASGDPELGEGAEDGFGQILSGSIERSNVDITEELVNLITSQRNYQAAAKAIE 435

Query: 120 QSHDMMTTTLDL 131
            S  M  T +++
Sbjct: 436 TSTSMTQTIINI 447


>gi|197285510|ref|YP_002151382.1| flagellar hook protein FlgE [Proteus mirabilis HI4320]
 gi|227356001|ref|ZP_03840393.1| flagellar hook protein [Proteus mirabilis ATCC 29906]
 gi|194682997|emb|CAR43446.1| flagellar hook protein [Proteus mirabilis HI4320]
 gi|227163989|gb|EEI48891.1| flagellar hook protein [Proteus mirabilis ATCC 29906]
          Length = 406

 Score = 53.3 bits (126), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 29/77 (37%)

Query: 55  MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
           +   G     +     S  V     G      +  ++  NV++  E  +M    R Y +N
Sbjct: 329 LSSQGDNMWSETNGSGSPIVGVAGSGVFGKLTNNALEASNVDMSQELVNMIVAQRNYQSN 388

Query: 115 LQTIKQSHDMMTTTLDL 131
            QTIK    ++ T + +
Sbjct: 389 AQTIKTQDQILQTLVSM 405


>gi|109947758|ref|YP_664986.1| flagellar hook protein FlgE [Helicobacter acinonychis str. Sheeba]
 gi|109714979|emb|CAJ99987.1| flagellar hook protein [Helicobacter acinonychis str. Sheeba]
          Length = 718

 Score = 53.3 bits (126), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 13/85 (15%), Positives = 34/85 (40%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            + +  +   GG    + G      +   + G   + +   ++  NV++     ++    
Sbjct: 634 FANDAGLQALGGNVFSQTGNSGQALIGAANTGRRGSISGSKLESSNVDLSRSLTNLIVVQ 693

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R + AN + +  S  ++ T L+L +
Sbjct: 694 RGFQANSKAVTTSDQILNTLLNLKQ 718



 Score = 34.5 bits (77), Expect = 4.5,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 16/33 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ S     +G+      + I S NIAN  TTG
Sbjct: 1  MLRSLWSGVNGMQAHQIALDIESNNIANVNTTG 33


>gi|13472576|ref|NP_104143.1| flagellar basal body rod protein FlgG [Mesorhizobium loti
           MAFF303099]
 gi|14023322|dbj|BAB49929.1| flagellar basal body distal rod protein; FlgG [Mesorhizobium loti
           MAFF303099]
          Length = 262

 Score = 53.3 bits (126), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 20/41 (48%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
             G ++  NV+ + E  ++    R Y  N + I+ + DM +
Sbjct: 215 QQGYLEASNVDPVKEITELISAQRAYEMNSKVIQAADDMAS 255



 Score = 44.1 bits (102), Expect = 0.006,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 24/67 (35%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          + +  IA +G+  Q   +++I+ NIAN  TTG       +       +            
Sbjct: 1  MKALAIAATGMNAQQTNLEVIANNIANINTTGYKRARAEFSDLLYQVDRTQGVPNRSNAS 60

Query: 65 KIGVDQS 71
           +    S
Sbjct: 61 LVPEGVS 67


>gi|238919259|ref|YP_002932774.1| flagellar hook protein FlgE [Edwardsiella ictaluri 93-146]
 gi|238868828|gb|ACR68539.1| flagellar hook protein FlgE [Edwardsiella ictaluri 93-146]
          Length = 424

 Score = 53.3 bits (126), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 26/60 (43%)

Query: 72  TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             +            SG V+  NV++  +  DM    R Y +N QTIK    ++ T ++L
Sbjct: 364 PIIGTSGTSGLGTLTSGAVEASNVDLSKQLVDMIVAQRNYQSNAQTIKTQDQILQTLVNL 423



 Score = 36.8 bits (83), Expect = 1.1,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 26/63 (41%), Gaps = 4/63 (6%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
              A SG+   S ++ +I  NIAN++T G   GS  +               GV+V  +
Sbjct: 2  GFSQAISGMNAASTQLDVIGNNIANSQTVGFKSGSVTFA----DMFAGSKIGLGVKVASV 57

Query: 67 GVD 69
            D
Sbjct: 58 DQD 60


>gi|87306343|ref|ZP_01088490.1| flagellar hook basal body protein flgG [Blastopirellula marina DSM
           3645]
 gi|87290522|gb|EAQ82409.1| flagellar hook basal body protein flgG [Blastopirellula marina DSM
           3645]
          Length = 266

 Score = 53.3 bits (126), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 28/75 (37%)

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
           G     +     +  V   +     +   G ++  NV  + E  D+  T R +  N QT+
Sbjct: 192 GDNLYSETNASSAAIVGNPNIDGFGSVEKGFLEASNVEPVQELVDLITTQRAFELNSQTV 251

Query: 119 KQSHDMMTTTLDLLR 133
           +    ++    +L R
Sbjct: 252 QAGDQILQLVSNLRR 266



 Score = 37.2 bits (84), Expect = 0.88,   Method: Composition-based stats.
 Identities = 9/37 (24%), Positives = 18/37 (48%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGS 41
          + + + A +G+     ++ +IS N+AN  TT      
Sbjct: 3  VQTLYTAATGMQTLQTKLDVISNNLANVNTTAFKKDR 39


>gi|222824502|ref|YP_002576076.1| flagellar hook protein FlgE [Campylobacter lari RM2100]
 gi|222539723|gb|ACM64824.1| flagellar hook protein FlgE [Campylobacter lari RM2100]
          Length = 541

 Score = 53.3 bits (126), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 7/48 (14%), Positives = 23/48 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
               ++  NV++ V   ++    + Y ++ ++I  +  M+   +++ R
Sbjct: 494 KGSYLEQSNVDLSVAFTNLITLQKAYDSSSKSITTADQMIQKAINMKR 541


>gi|217976225|ref|YP_002360372.1| flagellar basal body rod protein FlgG [Methylocella silvestris BL2]
 gi|217501601|gb|ACK49010.1| flagellar basal-body rod protein FlgG [Methylocella silvestris BL2]
          Length = 262

 Score = 53.3 bits (126), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 29/79 (36%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            + E  +   G    ++     S  V           +   ++  NV+ + E  D+    
Sbjct: 178 FANEAGLTPLGNNLYRQTEASGSPIVGVPGDPGFATVSQSYLESSNVDPVKEITDLIAAQ 237

Query: 109 RLYMANLQTIKQSHDMMTT 127
           R Y  N + I+ + +M +T
Sbjct: 238 RAYEMNSKVIQAASEMEST 256



 Score = 39.9 bits (91), Expect = 0.13,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 26/64 (40%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          + +  IA +G+A Q   + +I+ NIAN  TTG       +       E +   S   +  
Sbjct: 1  MKALSIAATGMAAQDLNVAVIANNIANINTTGFKRARAEFTDLLYQAERLQGVSSRGQSN 60

Query: 65 KIGV 68
           I  
Sbjct: 61 TIPE 64


>gi|254973936|ref|ZP_05270408.1| flagellar basal body rod protein FlgG [Clostridium difficile
           QCD-66c26]
 gi|255091322|ref|ZP_05320800.1| flagellar basal body rod protein FlgG [Clostridium difficile CIP
           107932]
 gi|255312980|ref|ZP_05354563.1| flagellar basal body rod protein FlgG [Clostridium difficile
           QCD-76w55]
 gi|255515739|ref|ZP_05383415.1| flagellar basal body rod protein FlgG [Clostridium difficile
           QCD-97b34]
 gi|255648833|ref|ZP_05395735.1| flagellar basal body rod protein FlgG [Clostridium difficile
           QCD-37x79]
 gi|260682050|ref|YP_003213335.1| flagellar basal body rod protein FlgG [Clostridium difficile CD196]
 gi|260685648|ref|YP_003216781.1| flagellar basal body rod protein FlgG [Clostridium difficile
           R20291]
 gi|260208213|emb|CBA60571.1| putative flagellar basal-body rod protein [Clostridium difficile
           CD196]
 gi|260211664|emb|CBE01933.1| putative flagellar basal-body rod protein [Clostridium difficile
           R20291]
          Length = 253

 Score = 53.0 bits (125), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 35/106 (33%), Gaps = 2/106 (1%)

Query: 28  NIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVD--QSTFVEEFDPGHPVAN 85
           NI +   T    G      K I    +    G       G     +T   +      V  
Sbjct: 145 NIDSTNLTVSRNGELFVDNKKIGKINLYQPIGTQNFISEGDSLFVATDAAQIKQVEKVDI 204

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             G  +  NV++  E  D+  T R +  N + IK + +M     +L
Sbjct: 205 VQGYRERSNVSLQEEFVDLIATQRAFQMNSKGIKTADEMWQIANNL 250



 Score = 36.0 bits (81), Expect = 1.6,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 22/41 (53%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +    + + + L+   +++ IIS NIAN+ +TG    +  Y
Sbjct: 1  MYTMFYTSKTALSANQSKLDIISNNIANSDSTGYKKINMEY 41


>gi|332298513|ref|YP_004440435.1| flagellar basal-body rod protein FlgF [Treponema brennaborense DSM
           12168]
 gi|332181616|gb|AEE17304.1| flagellar basal-body rod protein FlgF [Treponema brennaborense DSM
           12168]
          Length = 265

 Score = 53.0 bits (125), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/42 (42%), Positives = 23/42 (54%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
            G  +  NVNV+ E   M E NR Y AN +TI+    MM+T 
Sbjct: 216 QGYTETSNVNVVNEMVSMIEVNRAYEANQKTIQTEDTMMSTL 257



 Score = 46.0 bits (107), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/101 (21%), Positives = 35/101 (34%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           ++   +I +SG+  Q  R+  IS N+ANA TT         +         M+  G  R 
Sbjct: 1   MVRGWYIGSSGMNAQQNRLDAISNNLANADTTAYKRDVTVSKSFPELLMRRMNDDGVYRT 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
                D +  V +   G          +  +       ADM
Sbjct: 61  PFGSADAAPIVGKIGLGVETNELYTDFEQGSFKQTSSKADM 101


>gi|312136040|ref|YP_004003378.1| fagellar hook-basal body protein [Caldicellulosiruptor owensensis
           OL]
 gi|311776091|gb|ADQ05578.1| fagellar hook-basal body protein [Caldicellulosiruptor owensensis
           OL]
          Length = 255

 Score = 53.0 bits (125), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 18/44 (40%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            G ++  NVN + E  +M    R Y AN +      + +   + 
Sbjct: 207 QGYLEGSNVNSVQEMVNMINVLRAYEANQKAFTIQDETLQKAIS 250



 Score = 35.2 bits (79), Expect = 2.8,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 30/81 (37%), Gaps = 12/81 (14%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSD------------PYRRKTISF 51
          +I   + + SG+ +    M I + N+AN  TTG                   Y + +   
Sbjct: 1  MIRGIYTSASGMILNQKLMDITANNVANVSTTGFKRDVAQVESFRNMLVYRIYDKTSSPD 60

Query: 52 EEVMHGSGGVRVKKIGVDQST 72
            + + S G  V +I  D S 
Sbjct: 61 NAIGYMSLGSDVSRIVSDFSQ 81


>gi|149375034|ref|ZP_01892807.1| Flagellar hook protein FlgE [Marinobacter algicola DG893]
 gi|149360923|gb|EDM49374.1| Flagellar hook protein FlgE [Marinobacter algicola DG893]
          Length = 618

 Score = 53.0 bits (125), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 15/83 (18%), Positives = 32/83 (38%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +    +   G     +        +   D G   +  +  ++  NV++  E  ++    
Sbjct: 535 FNNTNGLSPVGETTWVETFESGQPIIGAPDTGTLGSIKASSIEESNVDLSAELVNLIIAQ 594

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y AN +TI+ S  +  T ++L
Sbjct: 595 RNYQANAKTIETSDAVTQTVINL 617


>gi|2494530|sp|Q56326|FLGE_TREPH RecName: Full=Flagellar hook protein flgE
 gi|439981|gb|AAA73467.1| flagellar hook polypeptide [Treponema phagedenis]
          Length = 463

 Score = 53.0 bits (125), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 15/44 (34%), Positives = 25/44 (56%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  NV++  +  DM  T R + A  +TI+ S  M+ T L+L R
Sbjct: 420 LEMSNVDLTDQFTDMIITQRGFQAGAKTIQTSDTMLETVLNLKR 463



 Score = 39.5 bits (90), Expect = 0.15,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 20/42 (47%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S     SG+     RM +I  N+AN  TTG   G   ++
Sbjct: 1  MMRSLFSGVSGMQNHQTRMDVIGNNVANVNTTGFKRGRVNFQ 42


>gi|300312833|ref|YP_003776925.1| flagellar hook protein [Herbaspirillum seropedicae SmR1]
 gi|300075618|gb|ADJ65017.1| flagellar hook protein [Herbaspirillum seropedicae SmR1]
          Length = 420

 Score = 53.0 bits (125), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 31/83 (37%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +    +   G    +      S  V     G   A     V+  NV++  E  +M    
Sbjct: 337 FANPHGLQPIGNNLYQASEAAGSALVGTPTTGAFGALQGRAVEQSNVDLTAELVNMIVAQ 396

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R+Y AN QTIK    ++ T + L
Sbjct: 397 RVYQANSQTIKVQDTVLQTLVSL 419


>gi|296122947|ref|YP_003630725.1| flagellar basal-body rod protein FlgG [Planctomyces limnophilus DSM
           3776]
 gi|296015287|gb|ADG68526.1| flagellar basal-body rod protein FlgG [Planctomyces limnophilus DSM
           3776]
          Length = 266

 Score = 53.0 bits (125), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 20/114 (17%), Positives = 38/114 (33%), Gaps = 2/114 (1%)

Query: 22  MQIISENIANARTTGDTPGSDPYRRK--TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDP 79
           + I +E I +    G T  +   + +       E ++ +G              +     
Sbjct: 152 IGISAEGIVSVIQAGSTVQNQVGQIQLARFINPEGLYQAGESLYAVTDASGQPLISNPGD 211

Query: 80  GHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
                   G ++  NV    E  D+ +T R    N Q I+ S  ++    +L R
Sbjct: 212 QGLGLIRQGFLEISNVEPANELVDLIKTQRNVELNSQVIQASDQLLQLITNLRR 265



 Score = 41.4 bits (95), Expect = 0.039,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 18/41 (43%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          L  + + A SG+      +  I+ N+ANA T G       +
Sbjct: 2  LYRAMYTAASGMQAYMFNLDTIANNLANAGTNGFKRSRTDF 42


>gi|15887919|ref|NP_353600.1| flagellar hook protein FlgE [Agrobacterium tumefaciens str. C58]
 gi|15155515|gb|AAK86385.1| flagellar hook protein [Agrobacterium tumefaciens str. C58]
          Length = 425

 Score = 53.0 bits (125), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 20/92 (21%), Positives = 37/92 (40%), Gaps = 2/92 (2%)

Query: 44  YRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVAN--ASGIVKYPNVNVLVET 101
           Y+    +   V + +       +  + S  V    P          G ++  NV++  E 
Sbjct: 334 YQLALATVPSVDNLTPQNGNVYLPSNDSGVVTIGFPQSGSFGYIQKGALEGSNVDIASEL 393

Query: 102 ADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            DM E+ R+Y AN +  +   D+M   ++L R
Sbjct: 394 TDMIESQRIYTANSKVFQTGSDLMDVLINLKR 425



 Score = 41.8 bits (96), Expect = 0.031,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 21/43 (48%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
            +  +     SG+  Q+ ++  + +NIANA TTG    S  +
Sbjct: 1  MSIFGTMRTGVSGMNAQANKLGTVGDNIANASTTGYKRASTSF 43


>gi|325291962|ref|YP_004277826.1| Flagellar hook protein FlgE [Agrobacterium sp. H13-3]
 gi|325059815|gb|ADY63506.1| Flagellar hook protein FlgE [Agrobacterium sp. H13-3]
          Length = 426

 Score = 53.0 bits (125), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 2/92 (2%)

Query: 44  YRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPG--HPVANASGIVKYPNVNVLVET 101
           Y+    +   V + S       +  ++S  V    P          G ++  NV++  E 
Sbjct: 335 YQLAVATVPSVDNLSPQNGNVYLPSNESGVVTIGFPQTGSFGYIQKGALEGSNVDIASEL 394

Query: 102 ADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            DM E+ R+Y AN +  +   D+M   ++L R
Sbjct: 395 TDMIESQRIYTANSKVFQTGSDLMDVLINLKR 426



 Score = 41.4 bits (95), Expect = 0.040,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 21/43 (48%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
            +  +     SG+  Q+ ++  + +NIANA TTG    S  +
Sbjct: 1  MSIFGTMRTGVSGMNAQANKLGTVGDNIANASTTGYKRASTSF 43


>gi|269138582|ref|YP_003295282.1| flagellar hook protein [Edwardsiella tarda EIB202]
 gi|267984242|gb|ACY84071.1| flagellar hook protein [Edwardsiella tarda EIB202]
 gi|304558592|gb|ADM41256.1| Flagellar hook protein FlgE [Edwardsiella tarda FL6-60]
          Length = 410

 Score = 53.0 bits (125), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/60 (28%), Positives = 27/60 (45%)

Query: 72  TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             V         +  SG V+  NV++  +  DM    R Y +N QTIK    ++ T ++L
Sbjct: 350 PIVGTSGTSGLGSLTSGAVEASNVDLSKQLVDMIVAQRNYQSNAQTIKTQDQILQTLVNL 409



 Score = 35.6 bits (80), Expect = 2.4,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 21/39 (53%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
              A SG+   S+++ +I  NIAN++T G   GS  + 
Sbjct: 2  GFSQAISGMNAASSQLDVIGNNIANSQTVGFKSGSVTFA 40


>gi|302874614|ref|YP_003843247.1| fagellar hook-basal body protein [Clostridium cellulovorans 743B]
 gi|307690775|ref|ZP_07633221.1| flagellar basal body rod protein FlgG [Clostridium cellulovorans
           743B]
 gi|302577471|gb|ADL51483.1| fagellar hook-basal body protein [Clostridium cellulovorans 743B]
          Length = 255

 Score = 53.0 bits (125), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 16/107 (14%), Positives = 31/107 (28%), Gaps = 3/107 (2%)

Query: 27  ENIA-NARTTGD-TPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVA 84
            N A N   T     G        I     +       +          V+ +   +   
Sbjct: 147 NNFAVNPDGTITVKEGEAARTVGRIPIFNAIGNDSFSSIADSLYVPKDGVQVYRENNTD- 205

Query: 85  NASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
              G ++  NV++  E  DM  T R +  + + +     M     ++
Sbjct: 206 ILQGYLENSNVDMSKEMTDMIVTQRAFELSSKVLSTGDQMWGIVNNI 252



 Score = 40.6 bits (93), Expect = 0.073,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 18/33 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          +++    + S +  Q  ++  IS NIAN  TTG
Sbjct: 1  MLSLFWNSKSSMNAQQNKLDTISNNIANVNTTG 33


>gi|239907786|ref|YP_002954527.1| flagellar hook-associated protein 1 [Desulfovibrio magneticus RS-1]
 gi|239797652|dbj|BAH76641.1| flagellar hook-associated protein 1 [Desulfovibrio magneticus RS-1]
          Length = 710

 Score = 53.0 bits (125), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/131 (19%), Positives = 46/131 (35%), Gaps = 10/131 (7%)

Query: 5   IASAHIANSGLAVQSARMQIISENI-ANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           I + H+   GL         + +N+ A A T  +      Y     +  + +  +    V
Sbjct: 586 INAGHVGADGLVA-------VGDNLTAKAMTELENTAISFYVAGKTTVNQTLTDNYASLV 638

Query: 64  KKIGVDQSTFVEEFDPGHPVANASG--IVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
            KIG D +    +      +A       +    VN+  E  +M +    Y A  + +  +
Sbjct: 639 SKIGSDTAAASYQATYQAALAAELNEQQLSTSGVNLDEELTNMIKFQHSYQAAAKLVSTA 698

Query: 122 HDMMTTTLDLL 132
           + M  T L L 
Sbjct: 699 NSMFETVLGLK 709



 Score = 40.2 bits (92), Expect = 0.099,   Method: Composition-based stats.
 Identities = 19/121 (15%), Positives = 35/121 (28%), Gaps = 8/121 (6%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M  + +   +    L    A +Q+   NI+N  T G +  S   +              G
Sbjct: 1   MSGITSLLSMGAGALRANQAALQVTGNNISNVDTEGYSRQSVVLKDGQYVNTFTGQVGTG 60

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V  +++      FVE        A       Y  +  +    +         +N   +  
Sbjct: 61  VVAQEVVRAHDKFVEAQYLTKVSARDRYQTLYNGLQSVQNLVN--------ESNTDGLNT 112

Query: 121 S 121
           S
Sbjct: 113 S 113


>gi|225181584|ref|ZP_03735025.1| flagellar basal body rod protein [Dethiobacter alkaliphilus AHT 1]
 gi|225167692|gb|EEG76502.1| flagellar basal body rod protein [Dethiobacter alkaliphilus AHT 1]
          Length = 259

 Score = 53.0 bits (125), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 11/56 (19%), Positives = 24/56 (42%)

Query: 78  DPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            PG     + G ++  NV++  E   +    R +  N + ++ + +M +    L R
Sbjct: 204 FPGEGSRVSQGYLESSNVDLAAEMTQLIINQRSFELNSRALRTAEEMWSIANQLYR 259



 Score = 38.7 bits (88), Expect = 0.30,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 26/69 (37%), Gaps = 5/69 (7%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSD-----PYRRKTISFEEVMHGSG 59
          I     A  G+  Q  ++ + + NIAN  TTG    +       Y+        V   + 
Sbjct: 3  IRGLWNAAGGMRAQQQKIDVTAHNIANVNTTGYKKKTTLFSDLVYQSIERRGNAVEPAAA 62

Query: 60 GVRVKKIGV 68
          G   K +GV
Sbjct: 63 GEHPKTVGV 71


>gi|259417834|ref|ZP_05741753.1| flagellar hook protein FlgE [Silicibacter sp. TrichCH4B]
 gi|259346740|gb|EEW58554.1| flagellar hook protein FlgE [Silicibacter sp. TrichCH4B]
          Length = 422

 Score = 53.0 bits (125), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 21/43 (48%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +    +V  E   M +T R Y +N + I+   +M+  T ++ R
Sbjct: 380 EESGTDVATELTSMIQTQRAYSSNAKVIQTVDEMLQETTNIKR 422



 Score = 38.7 bits (88), Expect = 0.26,   Method: Composition-based stats.
 Identities = 21/69 (30%), Positives = 31/69 (44%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            + +S +   +GLA  S R+  IS+NIANA T G       +    IS     + +GGV
Sbjct: 1  MTISSSLNAGVAGLAANSTRLAAISDNIANASTAGYKRVVTSFESMVISQNGGSYAAGGV 60

Query: 62 RVKKIGVDQ 70
           V    +  
Sbjct: 61 SVNNTRMID 69


>gi|159045919|ref|YP_001534713.1| flagellar hook protein FlgE [Dinoroseobacter shibae DFL 12]
 gi|157913679|gb|ABV95112.1| flagellar hook protein FlgE [Dinoroseobacter shibae DFL 12]
          Length = 434

 Score = 53.0 bits (125), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 21/44 (47%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++    +V  E   +  T R Y +N + I+   +M+  T ++ R
Sbjct: 391 LEESAADVAGELTRLITTQRAYSSNAKIIQTVDEMLQETTNIKR 434



 Score = 50.6 bits (119), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 27/131 (20%), Positives = 47/131 (35%), Gaps = 8/131 (6%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG- 60
             + +S +   SGL   + R+  IS+NIAN+ T G       ++   I+       S G 
Sbjct: 1   MTISSSLNAGVSGLNANATRLATISDNIANSSTYGYKRAEADFQSLVINGNSSGTYSAGG 60

Query: 61  --VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETAD----MRETNRLYMAN 114
             V   ++  +Q   V   +P       SG++    ++ L E          T   +  N
Sbjct: 61  VRVTTTRVIDEQGPLVTTSNPTDLAVGGSGMLPVTTLSALDENTGGYPLSLMTTGSFSPN 120

Query: 115 LQ-TIKQSHDM 124
               +     M
Sbjct: 121 ADGVLTTETGM 131


>gi|33601541|ref|NP_889101.1| flagellar hook protein FlgE [Bordetella bronchiseptica RB50]
 gi|33575977|emb|CAE33056.1| flagellar hook protein FlgE [Bordetella bronchiseptica RB50]
          Length = 473

 Score = 53.0 bits (125), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 24/42 (57%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           ++  NV++  E  +M    R Y AN QTI+  +++M   +++
Sbjct: 431 LEGSNVDLSSELVNMIVAQRTYQANAQTIQTQNEVMQVLMNM 472



 Score = 35.2 bits (79), Expect = 3.4,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 18/39 (46%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
              A SGL   S  + +I  NIAN+ T G   G+  + 
Sbjct: 2  GFGQALSGLNAASQNLDVIGNNIANSGTVGFKSGAASFA 40


>gi|226327746|ref|ZP_03803264.1| hypothetical protein PROPEN_01619 [Proteus penneri ATCC 35198]
 gi|225203450|gb|EEG85804.1| hypothetical protein PROPEN_01619 [Proteus penneri ATCC 35198]
          Length = 406

 Score = 53.0 bits (125), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 29/77 (37%)

Query: 55  MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
           +   G     +     S  V     G      +  ++  NV++  E  +M    R Y +N
Sbjct: 329 LSSQGDNMWSETNGSGSPIVGVAGSGVFGKLTNNALEASNVDMSQELVNMIVAQRNYQSN 388

Query: 115 LQTIKQSHDMMTTTLDL 131
            QTIK    ++ T + L
Sbjct: 389 AQTIKTQDQILQTLVSL 405


>gi|218663526|ref|ZP_03519456.1| flagellar hook protein FlgE [Rhizobium etli IE4771]
          Length = 384

 Score = 53.0 bits (125), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 41/111 (36%), Gaps = 4/111 (3%)

Query: 23  QIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHP 82
            ++S + AN    G T          ++  + +    G      G    T          
Sbjct: 278 GVVSVSYAN----GTTKALYQIPLANVASPDNLTLLSGNVYTANGQSGVTVTGFPQTNGL 333

Query: 83  VANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            +  SG ++  NV++  E  +M E  R Y AN +  +   D+M   ++L R
Sbjct: 334 GSIQSGALESSNVDLAGELTEMIEAQRSYTANSKVFQTGSDIMDVLVNLKR 384


>gi|160896079|ref|YP_001561661.1| flagellar basal body FlaE domain-containing protein [Delftia
           acidovorans SPH-1]
 gi|160361663|gb|ABX33276.1| flagellar basal body FlaE domain protein [Delftia acidovorans
           SPH-1]
          Length = 423

 Score = 53.0 bits (125), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/83 (21%), Positives = 34/83 (40%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +  + +   G  +  +            + G   +  SG ++  NV++  E  +M    
Sbjct: 340 FTNTQGLGAVGDNKWVETSDSGPALNGTAESGTFGSLRSGALEDSNVDLTAELVNMMTAQ 399

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y AN QTIK    + +T ++L
Sbjct: 400 RAYQANAQTIKTQDQVFSTLVNL 422



 Score = 36.4 bits (82), Expect = 1.2,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 21/69 (30%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
                SGL   S  + +I  NIANA TTG       +     S      G        +
Sbjct: 2  GFQQGLSGLNAASKNLDVIGHNIANANTTGFKSSRAEFAEAVASAVGSASGQNSGIGVNV 61

Query: 67 GVDQSTFVE 75
                F +
Sbjct: 62 AAVTQQFRQ 70


>gi|292670487|ref|ZP_06603913.1| flagellar basal body and hook protein [Selenomonas noxia ATCC
           43541]
 gi|292647897|gb|EFF65869.1| flagellar basal body and hook protein [Selenomonas noxia ATCC
           43541]
          Length = 506

 Score = 53.0 bits (125), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/87 (19%), Positives = 34/87 (39%), Gaps = 1/87 (1%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVAN-ASGIVKYPNVNVLVETADMRE 106
             S    +   GG   ++     S  V         A      ++  NV++  + +DM  
Sbjct: 420 KFSNPSGLTKIGGSLYQESNNSNSKVVRAQTVESTGAKITPSALEMSNVDIADQFSDMII 479

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
           T R + +N + I    +M+ T +++ R
Sbjct: 480 TQRGFQSNSKVITVGDEMLETLINMKR 506


>gi|163738039|ref|ZP_02145455.1| S-adenosyl-L-homocysteine hydrolase [Phaeobacter gallaeciensis
           BS107]
 gi|161388655|gb|EDQ13008.1| S-adenosyl-L-homocysteine hydrolase [Phaeobacter gallaeciensis
           BS107]
          Length = 440

 Score = 53.0 bits (125), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 22/43 (51%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +    +V  E  +M +T R Y +N + I+   +M+  T ++ R
Sbjct: 398 EESATDVAGELTNMIQTQRAYSSNAKVIQTVDEMLQETTNIKR 440



 Score = 40.6 bits (93), Expect = 0.076,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 33/82 (40%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            + +S +   +GL+  ++R+  IS+NIANA T G       +    +S     + +GGV
Sbjct: 8  MTISSSLNAGVAGLSANASRLASISDNIANASTPGYKRVQTDFHSMVMSSSGGAYSAGGV 67

Query: 62 RVKKIGVDQSTFVEEFDPGHPV 83
          R   + +               
Sbjct: 68 RTTNVRLIDERGPLVTTSNATD 89


>gi|187918157|ref|YP_001883720.1| flagellar hook protein FlgE [Borrelia hermsii DAH]
 gi|119861005|gb|AAX16800.1| flagellar hook protein FlgE [Borrelia hermsii DAH]
          Length = 442

 Score = 53.0 bits (125), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 22/43 (51%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           ++  NV++  +  DM  T R + AN +TI  S  ++   + L 
Sbjct: 399 LEMANVDLAEQFTDMIVTQRGFQANAKTITTSDQLLQELVRLK 441



 Score = 39.9 bits (91), Expect = 0.12,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 20/42 (47%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S +   SGL     RM ++  NIAN  T G   G   ++
Sbjct: 1  MMRSLYSGVSGLQNHQTRMDVVGNNIANVNTIGFKKGRVNFQ 42


>gi|317152826|ref|YP_004120874.1| flagellar hook-basal body protein [Desulfovibrio aespoeensis
           Aspo-2]
 gi|316943077|gb|ADU62128.1| flagellar hook-basal body protein [Desulfovibrio aespoeensis
           Aspo-2]
          Length = 515

 Score = 53.0 bits (125), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 15/100 (15%), Positives = 30/100 (30%)

Query: 34  TTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
           T G T           +  + +   G             F+           AS  ++  
Sbjct: 416 TNGQTQELYTIALANFTNTQGLSSQGSNLYSATTESGQAFIGTPGSAGFGTIASNSLEQS 475

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           NV+   E   +      Y AN + I  +  +++  + + R
Sbjct: 476 NVDTATELTKLIILQAAYQANAKVITTADTLLSAAISMKR 515



 Score = 36.4 bits (82), Expect = 1.2,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 29/81 (35%), Gaps = 4/81 (4%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPG----SDPYRRKTISFEEVMHG 57
            +  S +   SGL  QS    ++S N+AN+ TT          D +     +   V   
Sbjct: 1  MSITGSMYTGISGLKAQSQATSVVSNNLANSTTTAYKSSSITFEDVFYSTVYAGGSVGQV 60

Query: 58 SGGVRVKKIGVDQSTFVEEFD 78
            GV V  +  D S    E  
Sbjct: 61 GNGVTVASVNTDYSQGSYEST 81


>gi|255099439|ref|ZP_05328416.1| flagellar basal body rod protein FlgG [Clostridium difficile
           QCD-63q42]
          Length = 253

 Score = 53.0 bits (125), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 35/106 (33%), Gaps = 2/106 (1%)

Query: 28  NIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVD--QSTFVEEFDPGHPVAN 85
           NI +   T    G      K I    +    G       G     +T   +      V  
Sbjct: 145 NIDSTNLTVSRNGELFVDNKKIGKINLYQPIGTQNFISEGDSLFVATDAAQIKQVEKVDI 204

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             G  +  NV++  E  D+  T R +  N + IK + +M     +L
Sbjct: 205 VQGYRERSNVSLQEEFVDLIATQRAFQMNSKGIKTADEMWQIANNL 250



 Score = 36.0 bits (81), Expect = 1.6,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 22/41 (53%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +    + + + L+   +++ IIS NIAN+ +TG    +  Y
Sbjct: 1  MYTMFYTSKTALSANQSKLDIISNNIANSDSTGYKKINMEY 41


>gi|126730121|ref|ZP_01745933.1| flagellar hook protein FlgE, putative [Sagittula stellata E-37]
 gi|126709501|gb|EBA08555.1| flagellar hook protein FlgE, putative [Sagittula stellata E-37]
          Length = 435

 Score = 53.0 bits (125), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 22/43 (51%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +    +V  E  DM +T R Y +N + I+   +M+  T ++ R
Sbjct: 393 EESTTDVAAELTDMIQTQRAYSSNAKVIQTVDEMLQETTNIKR 435



 Score = 39.1 bits (89), Expect = 0.19,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 30/64 (46%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            + +S +   +GL+  + R+  IS+NIAN+ T G       +     S     + +GGV
Sbjct: 1  MTISSSLNAGVAGLSANATRLATISDNIANSATQGYKRVETEFSAMVTSGNSGTYTAGGV 60

Query: 62 RVKK 65
          R + 
Sbjct: 61 RTQT 64


>gi|91794993|ref|YP_564644.1| flagellar basal-body rod FlgG [Shewanella denitrificans OS217]
 gi|91716995|gb|ABE56921.1| Flagellar basal-body rod FlgG [Shewanella denitrificans OS217]
          Length = 261

 Score = 53.0 bits (125), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 29/102 (28%)

Query: 29  IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASG 88
           +A      +            +    +   G    ++                      G
Sbjct: 158 MATIAGDAEPQELGQITLINFTNPAGLEARGNNLYRETAASGVAVEGVAGDQALGGLRQG 217

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            ++  NVNV+ E  +M  T R Y  N + +  S DM+     
Sbjct: 218 SLEGSNVNVVEEMVEMISTQRAYEMNAKVVSASDDMLKFLNQ 259



 Score = 41.8 bits (96), Expect = 0.029,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 22/41 (53%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          + ++  ++ +GLA Q  +M  I+ N+AN  TTG       +
Sbjct: 1  MQSALWVSKTGLAAQDTKMTTIANNLANVNTTGFKRDRVAF 41


>gi|302671950|ref|YP_003831910.1| flagellar basal-body rod protein FlgG2 [Butyrivibrio
           proteoclasticus B316]
 gi|302396423|gb|ADL35328.1| flagellar basal-body rod protein FlgG2 [Butyrivibrio
           proteoclasticus B316]
          Length = 277

 Score = 53.0 bits (125), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 22/48 (45%), Gaps = 1/48 (2%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT-TTLDLLR 133
           SG ++  NV+V+ E  +M  T R Y  N + I    D +      + +
Sbjct: 229 SGFLEQSNVSVVDEMVNMIATQRNYDTNQRMITTIDDTLQIAANQIGK 276


>gi|254477684|ref|ZP_05091070.1| flagellar basal-body rod protein FlgG [Ruegeria sp. R11]
 gi|214031927|gb|EEB72762.1| flagellar basal-body rod protein FlgG [Ruegeria sp. R11]
          Length = 261

 Score = 53.0 bits (125), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 14/82 (17%), Positives = 26/82 (31%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            S  + +   G     +     +  V             G ++  +V+ + E  ++ E  
Sbjct: 178 FSNPKGLEALGSNLFVETEASGAATVASPGENGLGTLRQGYLEASSVDAVREVTELIEAQ 237

Query: 109 RLYMANLQTIKQSHDMMTTTLD 130
           R Y  N + I     MM  T  
Sbjct: 238 RGYEMNAKVISAVDQMMGATTQ 259



 Score = 44.9 bits (104), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 21/41 (51%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          + +  IA +G+  Q  R++ IS N+AN  TTG       + 
Sbjct: 1  MRALKIAATGMTAQQLRVETISNNLANMNTTGYNARRAEFA 41


>gi|209966998|ref|YP_002299913.1| flagellar hook protein FlgE [Rhodospirillum centenum SW]
 gi|209960464|gb|ACJ01101.1| flagellar hook protein FlgE [Rhodospirillum centenum SW]
          Length = 655

 Score = 53.0 bits (125), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/134 (17%), Positives = 48/134 (35%), Gaps = 8/134 (5%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           I + ++   G    + R   I   +A+     +           I   +V + +G  +  
Sbjct: 525 IETFNLTQDGFTRGAFRDLTI---LASGEVVANYDNGRSRVLAQIPIFQVSNPNGMQKTD 581

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIV-----KYPNVNVLVETADMRETNRLYMANLQTIK 119
                 +T            N +G +     +  NV++  E   +  T R Y AN + + 
Sbjct: 582 GNAYVATTDSGAVRASGAGENGAGNLVVSSIEGSNVDIADEFTKLIVTQRAYSANTRVVT 641

Query: 120 QSHDMMTTTLDLLR 133
            ++DM+   L+L R
Sbjct: 642 SANDMLVEVLNLGR 655



 Score = 39.9 bits (91), Expect = 0.14,   Method: Composition-based stats.
 Identities = 18/63 (28%), Positives = 28/63 (44%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            +  +   A  GL  QS  +  IS+NIAN++T G       ++         +H  GGV
Sbjct: 1  MSVFGAMTTAVGGLTAQSRSLGHISDNIANSQTIGYKRVETSFQNLITQSNSSVHSPGGV 60

Query: 62 RVK 64
          R +
Sbjct: 61 RAR 63


>gi|114562344|ref|YP_749857.1| flagellar basal body rod protein FlgG [Shewanella frigidimarina
           NCIMB 400]
 gi|114333637|gb|ABI71019.1| flagellar basal-body rod protein FlgG [Shewanella frigidimarina
           NCIMB 400]
          Length = 262

 Score = 53.0 bits (125), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 13/81 (16%), Positives = 26/81 (32%)

Query: 46  RKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
                    +   G     + G   +            +   G ++  NVNV  E  ++ 
Sbjct: 176 MTDFINPAGLDPLGQNLYTETGASGTPIQGTASLDGLGSIRQGALETSNVNVTEELVNLI 235

Query: 106 ETNRLYMANLQTIKQSHDMMT 126
           +  R+Y  N + I     M++
Sbjct: 236 QGQRIYEMNSKVISAVDQMLS 256



 Score = 38.3 bits (87), Expect = 0.34,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 20/41 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  +  I+ +G+  Q   + +IS N+ANA T G       +
Sbjct: 1  MHPALWISKTGVDAQQTNIAVISNNVANASTVGFKKSRAVF 41


>gi|291536012|emb|CBL09124.1| fagellar hook-basal body proteins [Roseburia intestinalis M50/1]
          Length = 551

 Score = 53.0 bits (125), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 25/53 (47%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
              +  SG ++  NV++  E   M  T R + AN + I  S  ++   ++L R
Sbjct: 499 DGSSMTSGELEMSNVDLSTEFTQMIITQRGFQANSRIITTSDTLLEELVNLKR 551



 Score = 39.1 bits (89), Expect = 0.22,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 20/42 (47%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S + A SGL     +M +I  NIAN  T      S  ++
Sbjct: 1  MMRSMYSAVSGLKTHQTKMDVIGNNIANVNTVAFKSSSVVFQ 42


>gi|322421726|ref|YP_004200949.1| flagellar hook-basal body protein [Geobacter sp. M18]
 gi|320128113|gb|ADW15673.1| flagellar hook-basal body protein [Geobacter sp. M18]
          Length = 294

 Score = 53.0 bits (125), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 15/44 (34%), Positives = 22/44 (50%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  NV++  E   M  T R Y AN +TI  +  M    L L+R
Sbjct: 251 LEQSNVDMASEFVKMIVTQRAYSANSKTITTTDQMTQEVLQLIR 294


>gi|78776232|ref|YP_392547.1| hypothetical protein Suden_0031 [Sulfurimonas denitrificans DSM
           1251]
 gi|78496772|gb|ABB43312.1| conserved hypothetical protein [Sulfurimonas denitrificans DSM
           1251]
          Length = 430

 Score = 53.0 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 20/44 (45%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  NV + V   ++    R Y AN + I  +  M+   L + R
Sbjct: 387 LEGSNVRMEVALTEIIVMQRSYDANSKCITTADQMLQKALSMHR 430


>gi|59712479|ref|YP_205255.1| flagellar basal body rod protein FlgG [Vibrio fischeri ES114]
 gi|59480580|gb|AAW86367.1| flagellar distal rod protein FlgG [Vibrio fischeri ES114]
          Length = 262

 Score = 53.0 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 23/72 (31%)

Query: 55  MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
           +   G       G                A    +++  NVNV  E  +M E  R+Y  N
Sbjct: 185 LEPVGQNLYLPTGASGDPQEGTPGLDGFGAVRQSMLEASNVNVTEELVNMIEAQRVYEMN 244

Query: 115 LQTIKQSHDMMT 126
            + I     M +
Sbjct: 245 SKVISAVDKMAS 256



 Score = 38.7 bits (88), Expect = 0.24,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 19/41 (46%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  +  ++ +GL  Q   +  IS N+ANA T G       +
Sbjct: 1  MNPALWVSKTGLDAQQTNIATISNNLANASTVGFKKSRAVF 41


>gi|268589982|ref|ZP_06124203.1| flagellar hook protein FlgE [Providencia rettgeri DSM 1131]
 gi|291314700|gb|EFE55153.1| flagellar hook protein FlgE [Providencia rettgeri DSM 1131]
          Length = 419

 Score = 53.0 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 30/83 (36%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +    +   GG          +        G      SG ++  NV++  E   M    
Sbjct: 336 FANPNGLVSQGGNVWASSNTSGNPMDGVPGVGQFGKLTSGALESSNVDMSQELISMIVMQ 395

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y +N QTIK    M+ T ++L
Sbjct: 396 RNYQSNAQTIKTQDQMLQTLVNL 418


>gi|242278416|ref|YP_002990545.1| hypothetical protein Desal_0941 [Desulfovibrio salexigens DSM 2638]
 gi|242121310|gb|ACS79006.1| protein of unknown function DUF1078 domain protein [Desulfovibrio
           salexigens DSM 2638]
          Length = 513

 Score = 53.0 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 11/85 (12%), Positives = 30/85 (35%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            + E  +   GG   +         +         +  S  ++  NV++  +  ++    
Sbjct: 429 FTNESGLKAEGGTLFRATTDSGEAIIGTAGSSGFGSVVSNALEGSNVDLASQMTELIIIQ 488

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
             Y AN + +  +  ++ T + L +
Sbjct: 489 SSYQANSKVVTTADTLLQTAISLKK 513


>gi|296103611|ref|YP_003613757.1| Flagellar basal body FlaE domain protein [Enterobacter cloacae
           subsp. cloacae ATCC 13047]
 gi|295058070|gb|ADF62808.1| Flagellar basal body FlaE domain protein [Enterobacter cloacae
           subsp. cloacae ATCC 13047]
          Length = 399

 Score = 53.0 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 32/77 (41%)

Query: 55  MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
           +   G     +       F+     G     +  +++  NVN+  E  +M    R Y +N
Sbjct: 322 LEQQGNNLWAETSQSGQPFLGTSGSGSFGDISGNMLESSNVNLGDEMVNMIVYQRNYQSN 381

Query: 115 LQTIKQSHDMMTTTLDL 131
            QTIK   +++ T ++L
Sbjct: 382 SQTIKTQSEVLQTLVNL 398


>gi|292492365|ref|YP_003527804.1| flagellar basal-body rod protein FlgG [Nitrosococcus halophilus
           Nc4]
 gi|291580960|gb|ADE15417.1| flagellar basal-body rod protein FlgG [Nitrosococcus halophilus
           Nc4]
          Length = 261

 Score = 53.0 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 22/123 (17%), Positives = 36/123 (29%), Gaps = 3/123 (2%)

Query: 8   AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
             I    L+V      I+S  +A              +         +   G    K+  
Sbjct: 140 ITIPEGALSVTVGSDGIVSVLVA---GDTAPTQLGNVQLADFINPAGLQPIGNNLFKETA 196

Query: 68  VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
                               G ++  NVNV+ E  +M ET R Y  N + I  + +M+  
Sbjct: 197 SSGVAQTGIPGLTGFGTLVQGALEGANVNVVEELVNMIETQRAYEMNSKAIAGTDEMLQF 256

Query: 128 TLD 130
              
Sbjct: 257 ATQ 259



 Score = 47.9 bits (112), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 16/41 (39%), Positives = 22/41 (53%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  +  IA +GL  Q  RM +IS N+AN  TTG   G   +
Sbjct: 1  MNQALWIAKTGLDAQQTRMAVISNNLANVNTTGFKRGRAVF 41


>gi|297570292|ref|YP_003691636.1| flagellar basal-body rod protein FlgF [Desulfurivibrio alkaliphilus
           AHT2]
 gi|296926207|gb|ADH87017.1| flagellar basal-body rod protein FlgF [Desulfurivibrio alkaliphilus
           AHT2]
          Length = 244

 Score = 53.0 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 21/60 (35%)

Query: 71  STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           +   E            G ++  NVN + E   M +  R Y A  + I+   DM    + 
Sbjct: 178 AEGEEMPLEAMNFQVRQGFLEKSNVNSVEEMTTMIDLQRSYEAQQKMIQAIDDMDEQAIS 237



 Score = 34.5 bits (77), Expect = 4.8,   Method: Composition-based stats.
 Identities = 11/77 (14%), Positives = 20/77 (25%)

Query: 15 LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFV 74
          +  Q  R+  ++ N+AN  T G    +  +              G          Q    
Sbjct: 16 MLAQERRLDQVANNLANVDTAGYKKDAVSFWEMLYQANAERQRVGKALRVHTDHQQGHVD 75

Query: 75 EEFDPGHPVANASGIVK 91
             +P        G  +
Sbjct: 76 PTGNPLDLAIQGEGFFR 92


>gi|237751739|ref|ZP_04582219.1| flagellar hook protein FlgE [Helicobacter bilis ATCC 43879]
 gi|229373105|gb|EEO23496.1| flagellar hook protein FlgE [Helicobacter bilis ATCC 43879]
          Length = 718

 Score = 53.0 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 13/85 (15%), Positives = 29/85 (34%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +    +   G     + G      +   + G     +   ++  NV++      +    
Sbjct: 634 FANSAGLQAEGNNIFSETGNSGEPIIGAANTGRRGGVSGSKLEMSNVDLSRALTQLIVVQ 693

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R + AN + I  S  ++ T L L +
Sbjct: 694 RGFQANSKAITTSDQILNTLLSLKQ 718



 Score = 36.4 bits (82), Expect = 1.2,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 15/33 (45%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ S     SGL      + + S NIAN  T G
Sbjct: 1  MLRSLWSGVSGLQAHQVALDVESNNIANVNTVG 33


>gi|254488501|ref|ZP_05101706.1| flagellar hook protein FlgE [Roseobacter sp. GAI101]
 gi|214045370|gb|EEB86008.1| flagellar hook protein FlgE [Roseobacter sp. GAI101]
          Length = 432

 Score = 53.0 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 20/43 (46%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +    +V  E   M  T R Y +N + I+   +M+  T ++ R
Sbjct: 390 EESTTDVATELTTMIRTQRAYSSNAKVIQTVDEMLQETTNIKR 432



 Score = 37.5 bits (85), Expect = 0.64,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 29/64 (45%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            + +S +   +GL   + R+  +S+NIAN+ T G       +    +S     + +GGV
Sbjct: 1  MTISSSLNAGVAGLQANATRLASVSDNIANSSTYGYKRVVTDFNSLVLSEGSSSYTAGGV 60

Query: 62 RVKK 65
          R   
Sbjct: 61 RASS 64


>gi|254470407|ref|ZP_05083811.1| flagellar basal-body rod protein FlgG [Pseudovibrio sp. JE062]
 gi|211960718|gb|EEA95914.1| flagellar basal-body rod protein FlgG [Pseudovibrio sp. JE062]
          Length = 260

 Score = 53.0 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 13/84 (15%), Positives = 29/84 (34%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
             + +  +   G     +        +               ++  NV+ + E + +   
Sbjct: 176 RFTNQAGLEAIGDNLFLETPASGPPQLNNPGTAGFGNILQRHLESSNVDAVTELSSLISA 235

Query: 108 NRLYMANLQTIKQSHDMMTTTLDL 131
            R Y  N + IK + +M +TT +L
Sbjct: 236 QRAYEMNSKIIKAADEMYSTTTNL 259



 Score = 39.1 bits (89), Expect = 0.20,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 27/62 (43%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          + + HIA +G+  Q   +++IS N+AN RTTG       ++      +  M         
Sbjct: 1  MKALHIAATGMKAQELNVEVISNNVANMRTTGYKRQRADFQDLLYENQRRMGTETSDAGT 60

Query: 65 KI 66
           +
Sbjct: 61 IV 62


>gi|209884509|ref|YP_002288366.1| flagellar basal body FlaE domain protein [Oligotropha
           carboxidovorans OM5]
 gi|209872705|gb|ACI92501.1| flagellar basal body FlaE domain protein [Oligotropha
           carboxidovorans OM5]
          Length = 602

 Score = 53.0 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 22/125 (17%), Positives = 37/125 (29%), Gaps = 3/125 (2%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
            I N G      +   IS N        +    D       +F                 
Sbjct: 481 QIQNDGFPAGQLQTVSISNNGRVVGNYSNGRNIDLAAITLATFNGPNFLKRVDGGAFEVT 540

Query: 69  DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
           D+S                  ++  N ++  E   +  T + Y AN + I  S+ M+   
Sbjct: 541 DESGQALFGK---GGTIVGSSLEGSNTDIADEFTKLIVTQQAYSANTKVITTSNQMVQDL 597

Query: 129 LDLLR 133
           L++LR
Sbjct: 598 LNVLR 602


>gi|197335127|ref|YP_002156698.1| flagellar basal-body rod protein FlgG [Vibrio fischeri MJ11]
 gi|197316617|gb|ACH66064.1| flagellar basal-body rod protein FlgG [Vibrio fischeri MJ11]
          Length = 262

 Score = 53.0 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 23/72 (31%)

Query: 55  MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
           +   G       G                A    +++  NVNV  E  +M E  R+Y  N
Sbjct: 185 LEPVGQNLYLPTGASGDPQEGTPGLEGFGAVRQSMLEASNVNVTEELVNMIEAQRVYEMN 244

Query: 115 LQTIKQSHDMMT 126
            + I     M +
Sbjct: 245 SKVISAVDKMAS 256



 Score = 38.7 bits (88), Expect = 0.24,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 19/41 (46%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  +  ++ +GL  Q   +  IS N+ANA T G       +
Sbjct: 1  MNPALWVSKTGLDAQQTNIATISNNLANASTVGFKKSRAVF 41


>gi|329898287|ref|ZP_08272370.1| Flagellar basal-body rod protein flgG [gamma proteobacterium
           IMCC3088]
 gi|328920852|gb|EGG28295.1| Flagellar basal-body rod protein flgG [gamma proteobacterium
           IMCC3088]
          Length = 261

 Score = 52.6 bits (124), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/127 (14%), Positives = 39/127 (30%), Gaps = 3/127 (2%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           ++ +  +  +  ++   R   +   +               +      E  +   G    
Sbjct: 136 MVPAITVPVNSASLTVGRDGTVDAELEAGAGKVTLGQI---QLARFINEAGLQSIGRNLY 192

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
           ++        V             G ++  NVNV+ E  +M ET R Y  N + I  +  
Sbjct: 193 RETTASGPVEVGVPGISGIGELTQGSLEASNVNVVEEMVNMIETQRAYEVNSKAISAADG 252

Query: 124 MMTTTLD 130
           M+    +
Sbjct: 253 MLRFLNN 259



 Score = 43.3 bits (100), Expect = 0.010,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 21/41 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          + AS  +A +GL  Q  RM +I+ N+AN  T G       +
Sbjct: 1  MDASLWVAKTGLTAQQMRMTVIANNLANVNTVGFKKDRAVF 41


>gi|319898637|ref|YP_004158730.1| flagellar basal-body rod protein flgG (Distal rod protein)
           [Bartonella clarridgeiae 73]
 gi|319402601|emb|CBI76146.1| Flagellar basal-body rod protein flgG (Distal rod protein)
           [Bartonella clarridgeiae 73]
          Length = 264

 Score = 52.6 bits (124), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 12/93 (12%), Positives = 29/93 (31%)

Query: 33  RTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKY 92
                   +   R      E  +   G    ++     +    +       +    +++ 
Sbjct: 164 DADPSAVEAGRLRLVNFVNEVGLEPIGDNLFRETQASGAPVPGDPKDDGYGSIMQAMLES 223

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
            NV+ + E  ++    R Y  N + I+ S +M 
Sbjct: 224 SNVDPVKEMTELIAAQRSYEMNSKVIQASDEMA 256



 Score = 43.7 bits (101), Expect = 0.009,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 22/41 (53%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          + S  IA +G+A Q   + +I+ N+AN  TTG   G   + 
Sbjct: 3  MKSLSIAATGMAAQQTNLDVIANNMANINTTGFKRGRAEFA 43


>gi|222823151|ref|YP_002574724.1| flagellar hook protein FlgE [Campylobacter lari RM2100]
 gi|222538372|gb|ACM63473.1| flagellar hook protein FlgE [Campylobacter lari RM2100]
          Length = 814

 Score = 52.6 bits (124), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 19/100 (19%), Positives = 32/100 (32%)

Query: 34  TTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
           T G T         T      +   G    K      +  +     G         ++  
Sbjct: 715 TNGKTLALAKVALATFPNNMGLEEMGNNLYKATANSGTATIGHAGEGGRGGLKGSAIEMS 774

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           NV++     ++    R Y AN +TI  S  ++ T L L +
Sbjct: 775 NVDLSRALTELIVIQRGYQANSKTITTSDQLLNTLLQLKQ 814



 Score = 37.5 bits (85), Expect = 0.57,   Method: Composition-based stats.
 Identities = 14/95 (14%), Positives = 25/95 (26%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ S     SGL      M +   NIAN  T G       +        ++     G   
Sbjct: 1  MMRSLWAGVSGLQAHQYAMDVEGNNIANVNTFGFKYSRADFSTLMSQTSKIATAPDGNLG 60

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVL 98
           K  +               +  +      N ++ 
Sbjct: 61 GKNPMQVGLGAGVNSTTRIHSQGNIQTTDKNTDMA 95


>gi|260437440|ref|ZP_05791256.1| flagellar basal-body rod protein FlgG [Butyrivibrio crossotus DSM
           2876]
 gi|292810072|gb|EFF69277.1| flagellar basal-body rod protein FlgG [Butyrivibrio crossotus DSM
           2876]
          Length = 256

 Score = 52.6 bits (124), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 23/47 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NVNV+ E  +M    R Y ++ + I+     +   ++L +
Sbjct: 209 QGYLESSNVNVVSEMVNMITIARDYESSQKVIQSIDSTLERAVNLGQ 255



 Score = 36.4 bits (82), Expect = 1.4,   Method: Composition-based stats.
 Identities = 8/40 (20%), Positives = 20/40 (50%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDP 43
          ++ + +   +G+  +  R+ ++S N+AN+ TT        
Sbjct: 1  MVRALYTGATGMVNEMKRLDVVSNNLANSATTAYKKEGAT 40


>gi|203284669|ref|YP_002222409.1| flagellar hook-basal body complex protein [Borrelia duttonii Ly]
 gi|201084112|gb|ACH93703.1| flagellar hook-basal body complex protein [Borrelia duttonii Ly]
          Length = 282

 Score = 52.6 bits (124), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 24/45 (53%), Gaps = 1/45 (2%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD-LLR 133
           ++  NVN + E   M   NR+Y AN +TI+    ++   ++ + +
Sbjct: 237 LECSNVNAINEMVSMITVNRVYEANQKTIQTEDTLLGKLINEIGK 281



 Score = 48.3 bits (113), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 14/71 (19%), Positives = 29/71 (40%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++   + A SG+  Q  R+++I+ N+AN   TG        +          +  G  + 
Sbjct: 1  MVRGIYTAASGMIAQRHRLEVIANNLANIDLTGYKKDLSVQKAFPEMLIRRTNDDGLYKF 60

Query: 64 KKIGVDQSTFV 74
           K  ++ +  V
Sbjct: 61 PKGYLETAPVV 71


>gi|149201611|ref|ZP_01878585.1| Flagellar distal rod protein [Roseovarius sp. TM1035]
 gi|149144659|gb|EDM32688.1| Flagellar distal rod protein [Roseovarius sp. TM1035]
          Length = 262

 Score = 52.6 bits (124), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 43/123 (34%), Gaps = 3/123 (2%)

Query: 8   AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
             I     ++  +R  IIS  + +A    +            +    +   G   V +  
Sbjct: 141 IQIPPEATSISISRDGIISVTLPDA---VEAEEVGQLTLAQFANPRGLEPVGETFVVEST 197

Query: 68  VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
              +  V             G ++  NVNV+ E  +M E  R Y  N ++I  S +MM+ 
Sbjct: 198 ASGAPVVGNPLEDGMGDLVQGALETSNVNVVQELVEMIEAQRAYEINSRSISASDEMMSY 257

Query: 128 TLD 130
             +
Sbjct: 258 LAN 260



 Score = 41.4 bits (95), Expect = 0.041,   Method: Composition-based stats.
 Identities = 16/40 (40%), Positives = 22/40 (55%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
              H+A +GL  Q AR+Q+IS N+AN  TTG       +
Sbjct: 3  SNVMHVAKTGLNAQQARIQVISNNLANVNTTGFKRDRANF 42


>gi|207110317|ref|ZP_03244479.1| flagellar basal body rod protein FlgC [Helicobacter pylori
           HPKX_438_CA4C1]
          Length = 113

 Score = 52.6 bits (124), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/111 (26%), Positives = 43/111 (38%), Gaps = 29/111 (26%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS------------- 50
            ++S  I+  GL+ Q  R  +IS NIANA TT  + G    R++ +              
Sbjct: 2   FLSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGGPYRRQEAVFKAFDFNEILNQKI 61

Query: 51  ----------------FEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVAN 85
                            +  +     V V KI  D S  + ++DP HP AN
Sbjct: 62  AQNNQITPYEDPLDEGDDNPLIPITSVVVDKIVRDDSEPLMKYDPSHPDAN 112


>gi|85715052|ref|ZP_01046037.1| hypothetical protein NB311A_11787 [Nitrobacter sp. Nb-311A]
 gi|85698249|gb|EAQ36121.1| hypothetical protein NB311A_11787 [Nitrobacter sp. Nb-311A]
          Length = 262

 Score = 52.6 bits (124), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 11/54 (20%), Positives = 21/54 (38%)

Query: 80  GHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
                     ++  NV V+ E +D+    R Y  N + +  +  M+ +   L R
Sbjct: 209 DGFGDMQQSSLEQANVEVVSEISDLIAAQRAYEMNAKVVSAADQMLQSASALFR 262



 Score = 37.9 bits (86), Expect = 0.51,   Method: Composition-based stats.
 Identities = 15/41 (36%), Positives = 24/41 (58%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          + + + A +G+A Q   +Q+IS NIAN RTTG       ++
Sbjct: 1  MRALYTAATGMAAQELNVQVISNNIANLRTTGYKKQRAAFQ 41


>gi|209695762|ref|YP_002263692.1| flagellar hook protein FlgE [Aliivibrio salmonicida LFI1238]
 gi|208009715|emb|CAQ80019.1| flagellar hook protein FlgE [Aliivibrio salmonicida LFI1238]
          Length = 432

 Score = 52.6 bits (124), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 17/106 (16%), Positives = 40/106 (37%)

Query: 26  SENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVAN 85
           S NI  + + G            ++ ++ +  +GG +        +    E + G     
Sbjct: 326 SGNIVGSYSNGKDVTLGRVAMVRVTNQQGLAQNGGTQWSTTQASGAAIWGEANQGSFGDI 385

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            SG ++  N+++  E  D+    R + AN + +   + +    L +
Sbjct: 386 QSGTLEQSNIDMTQELVDLISAQRNFQANSRALDVHNQLQQNILQI 431



 Score = 36.4 bits (82), Expect = 1.3,   Method: Composition-based stats.
 Identities = 11/35 (31%), Positives = 16/35 (45%)

Query: 10 IANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +A SGL+     +   S N+ANA T G       +
Sbjct: 4  VALSGLSAAQKDLNTTSNNLANANTFGFKESRAEF 38


>gi|241203124|ref|YP_002974220.1| flagellar hook protein FlgE [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240857014|gb|ACS54681.1| protein of unknown function DUF1078 domain protein [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 432

 Score = 52.6 bits (124), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 31/82 (37%)

Query: 52  EEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
            + +    G      G    T              SG ++  NV++  E  +M E+ R Y
Sbjct: 351 PDKLTLMSGNVYSANGQSGVTVTGFPQTNGLGTIKSGALEGSNVDLAGELTEMIESQRSY 410

Query: 112 MANLQTIKQSHDMMTTTLDLLR 133
            AN +  +   D+M   ++L R
Sbjct: 411 TANSKVFQTGSDIMDVLVNLKR 432



 Score = 48.7 bits (114), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 29/64 (45%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            +  S   A SG+  Q+ R+  +++NIAN  TTG    S  +    +      + SGGV
Sbjct: 1  MSIFGSMKTAVSGMNAQANRLSTVADNIANVNTTGYKAVSTSFSSLVLPSSGGNYNSGGV 60

Query: 62 RVKK 65
          +   
Sbjct: 61 QTSV 64


>gi|294635610|ref|ZP_06714087.1| flagellar hook protein FlgE [Edwardsiella tarda ATCC 23685]
 gi|291091062|gb|EFE23623.1| flagellar hook protein FlgE [Edwardsiella tarda ATCC 23685]
          Length = 411

 Score = 52.6 bits (124), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 17/60 (28%), Positives = 26/60 (43%)

Query: 72  TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             V            SG V+  NV++  +  DM    R Y +N QTIK    ++ T ++L
Sbjct: 351 PIVGTSGTSGLGNLTSGAVEASNVDLSKQLVDMIVAQRNYQSNAQTIKTQDQILQTLVNL 410



 Score = 35.2 bits (79), Expect = 2.9,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 21/39 (53%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
              A SG+   S+++ +I  NIAN++T G   GS  + 
Sbjct: 2  GFSQAISGMNAASSQLDVIGNNIANSQTVGFKSGSVTFA 40


>gi|258622488|ref|ZP_05717510.1| Flagellar hook protein flgE [Vibrio mimicus VM573]
 gi|262173354|ref|ZP_06041031.1| flagellar hook protein FlgE [Vibrio mimicus MB-451]
 gi|258585188|gb|EEW09915.1| Flagellar hook protein flgE [Vibrio mimicus VM573]
 gi|261890712|gb|EEY36699.1| flagellar hook protein FlgE [Vibrio mimicus MB-451]
          Length = 398

 Score = 52.6 bits (124), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/105 (17%), Positives = 31/105 (29%), Gaps = 5/105 (4%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQS-----TFVEEFDPGHPVAN 85
           N          +  R+  +         G  +V      QS       +     G     
Sbjct: 292 NGMVYATYDNGESQRQGQVVLANFADPQGLSKVNDTAWTQSFSSGAPIMGIPGTGSLGEL 351

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           A G ++  NV++  E   +    R Y AN +TI     +     +
Sbjct: 352 APGSLEGSNVDLTSELVSLMTAQRNYQANAKTISTGDKLTQALFN 396



 Score = 41.0 bits (94), Expect = 0.053,   Method: Composition-based stats.
 Identities = 15/40 (37%), Positives = 19/40 (47%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR 46
          S +IA SGL   +  +  IS NIANA T G       +  
Sbjct: 2  SFNIALSGLDATNKELNTISNNIANASTFGFKGSRTEFAA 41


>gi|261344142|ref|ZP_05971786.1| flagellar hook protein FlgE [Providencia rustigianii DSM 4541]
 gi|282567734|gb|EFB73269.1| flagellar hook protein FlgE [Providencia rustigianii DSM 4541]
          Length = 422

 Score = 52.6 bits (124), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 30/83 (36%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +    +   GG          +        G      SG ++  NV++  E   M    
Sbjct: 339 FANPNGLVSQGGNVWASSNASGNPMDGVPGVGQFGKLTSGALESSNVDMSQELISMIVMQ 398

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y +N QTIK    M+ T ++L
Sbjct: 399 RNYQSNAQTIKTQDQMLQTLVNL 421


>gi|157363238|ref|YP_001470005.1| hypothetical protein Tlet_0374 [Thermotoga lettingae TMO]
 gi|157313842|gb|ABV32941.1| protein of unknown function DUF1078 domain protein [Thermotoga
           lettingae TMO]
          Length = 249

 Score = 52.6 bits (124), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 11/99 (11%), Positives = 27/99 (27%)

Query: 32  ARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVK 91
               G            +            ++       +    +          SG V+
Sbjct: 145 VDADGYIRDPVGNVITRLGIYNFDDPGELRKIGYTLFQPTEESGQPVVADEFRILSGYVE 204

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             NVN + E  ++ E  R +  + + +  S + +   + 
Sbjct: 205 LSNVNAIDEMVNLIEAQRHFEISQKALTVSDETLAKLIS 243



 Score = 34.5 bits (77), Expect = 5.5,   Method: Composition-based stats.
 Identities = 9/70 (12%), Positives = 24/70 (34%), Gaps = 4/70 (5%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPG----SDPYRRKTISFEEVMHGSG 59
          ++   + A  G+ +  +++ + + N+AN  T               R   +  +     G
Sbjct: 1  MLRGIYTAAMGMLLDMSKLDVTANNLANVETVAYKRDKLAFRAYQDRAIYALPDRRQPIG 60

Query: 60 GVRVKKIGVD 69
           +    +  D
Sbjct: 61 NLTYSAVLDD 70


>gi|313903628|ref|ZP_07837018.1| fagellar hook-basal body protein [Thermaerobacter subterraneus DSM
           13965]
 gi|313466181|gb|EFR61705.1| fagellar hook-basal body protein [Thermaerobacter subterraneus DSM
           13965]
          Length = 275

 Score = 52.6 bits (124), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 15/90 (16%), Positives = 34/90 (37%), Gaps = 3/90 (3%)

Query: 47  KTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANA--SGIVKYPNVNVLVETADM 104
           +          +   R + +       V    PG   A     G+++  NV++ +E   +
Sbjct: 187 RLAVMVPPAPDALESRGEGLYALGGNPVPAGAPGQDGAGWIRQGMLEQSNVDLALEMTRL 246

Query: 105 RETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
             + R Y  N + +    +M+ + ++ LR 
Sbjct: 247 LASQRAYQLNARAVLTGDEML-SLINRLRS 275


>gi|254475161|ref|ZP_05088547.1| flagellar hook protein FlgE [Ruegeria sp. R11]
 gi|214029404|gb|EEB70239.1| flagellar hook protein FlgE [Ruegeria sp. R11]
          Length = 441

 Score = 52.6 bits (124), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 22/43 (51%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +    +V  E  +M +T R Y +N + I+   +M+  T ++ R
Sbjct: 399 EESATDVAGELTNMIQTQRAYSSNAKVIQTVDEMLQETTNIKR 441



 Score = 40.2 bits (92), Expect = 0.089,   Method: Composition-based stats.
 Identities = 18/103 (17%), Positives = 37/103 (35%), Gaps = 4/103 (3%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             + +S +   SGL   ++R+  IS+NIAN+ T G       +    +      + +GGV
Sbjct: 8   MTISSSLNAGVSGLTANASRLASISDNIANSSTAGYKRVQTDFHSMVMGSSGGTYSAGGV 67

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
           R   + +                     V+   +  +    ++
Sbjct: 68  RTTNVRLIDERGPLV----STNNATDLAVRGRGMLPVTSMTEV 106


>gi|126697841|ref|YP_001086738.1| flagellar basal body rod protein FlgG [Clostridium difficile 630]
 gi|255305297|ref|ZP_05349469.1| flagellar basal body rod protein FlgG [Clostridium difficile ATCC
           43255]
 gi|115249278|emb|CAJ67091.1| Flagellar basal body rod protein FlgG [Clostridium difficile]
          Length = 253

 Score = 52.6 bits (124), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 35/106 (33%), Gaps = 2/106 (1%)

Query: 28  NIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVD--QSTFVEEFDPGHPVAN 85
           NI +   T    G      K I    +    G       G     +T   +      V  
Sbjct: 145 NIDSTNLTVSRNGELFVDNKKIGKINLYQPIGTQNFISEGDSLFVATDAAQIKQVEKVDI 204

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             G  +  NV++  E  D+  T R +  N + IK + +M     +L
Sbjct: 205 VQGYRERSNVSLQEEFVDLIATQRAFQMNSKGIKTADEMWQIANNL 250



 Score = 36.0 bits (81), Expect = 1.8,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 22/41 (53%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +    + + + L+   +++ IIS NIAN+ +TG    +  Y
Sbjct: 1  MYTMFYTSKTALSANQSKLDIISNNIANSDSTGYKKINMEY 41


>gi|330809230|ref|YP_004353692.1| flagellar basal-body rod protein [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327377338|gb|AEA68688.1| Flagellar basal-body rod protein [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 257

 Score = 52.6 bits (124), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 25/58 (43%)

Query: 76  EFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           E           G V+  NVN++ E + +    R Y  N + ++ S  ++ T  +L R
Sbjct: 200 EPGRDGQGVLLQGYVEMSNVNLIDEMSGLVLAQRAYQMNARLLQASDQILETINNLRR 257



 Score = 40.6 bits (93), Expect = 0.069,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 33/87 (37%), Gaps = 2/87 (2%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR- 62
          +I S  IA+SGL    A +  IS N+AN +T G       +            G G    
Sbjct: 1  MIDSLSIASSGLTANQAWIDSISNNVANMQTIGYKRSQVDFHDMVREVGTRDDGGGMTES 60

Query: 63 -VKKIGVDQSTFVEEFDPGHPVANASG 88
           +   G+  S   + F PG    + + 
Sbjct: 61 LLTGAGIQASQPSQVFSPGTVRESGNA 87


>gi|315453582|ref|YP_004073852.1| putative flagellar hook-associated protein [Helicobacter felis ATCC
           49179]
 gi|315132634|emb|CBY83262.1| putative flagellar hook-associated protein [Helicobacter felis ATCC
           49179]
          Length = 606

 Score = 52.6 bits (124), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/122 (17%), Positives = 38/122 (31%), Gaps = 4/122 (3%)

Query: 16  AVQSARMQIISEN--IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI--GVDQS 71
                 +  I+ N  +AN          D Y+ K  +    +  S    V K+    ++S
Sbjct: 485 TALRPWLAPINGNFDVANMMQQLQYDKIDFYQHKLSNAPMTIEESYQFVVSKVHTEAEKS 544

Query: 72  TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
               E                  V+   E  ++ +    Y AN + I     M+ T L +
Sbjct: 545 QRTLESKEAILGVVKKEHNAISGVSTDEEMVNLIKYQGGYAANAKVITAIDRMIETLLGM 604

Query: 132 LR 133
            +
Sbjct: 605 KQ 606



 Score = 44.9 bits (104), Expect = 0.004,   Method: Composition-based stats.
 Identities = 23/147 (15%), Positives = 47/147 (31%), Gaps = 13/147 (8%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M  +++S + + +GL      + +   NI+NA     +      R +        + + G
Sbjct: 1   MGGILSSLNTSYTGLQAHQVMVDVTGNNISNANDEFYSRQRVIARPQNSLAFTDRNVNMG 60

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLV-------ETADMRETNRLYMA 113
           V V+ I      FV          +A    ++ N+           E     +    + A
Sbjct: 61  VNVETIQRVHDEFVFARYAKANQEHAFYSTQFDNLREASSYFPDMNEVGIQNDLQNYFSA 120

Query: 114 ------NLQTIKQSHDMMTTTLDLLRD 134
                 N ++      +   T  L R+
Sbjct: 121 WKDLAKNAKSPATKQALAQKTQTLTRN 147


>gi|304438415|ref|ZP_07398355.1| flagellar hook protein FlgE [Selenomonas sp. oral taxon 149 str.
           67H29BP]
 gi|304368498|gb|EFM22183.1| flagellar hook protein FlgE [Selenomonas sp. oral taxon 149 str.
           67H29BP]
          Length = 678

 Score = 52.6 bits (124), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 27/48 (56%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            +  ++  NV++  + +DM  T R + +N + I  S +M+ T +++ R
Sbjct: 631 TTSALEMSNVDLADQFSDMIITQRGFQSNSKMITVSDEMLETLINMKR 678



 Score = 39.5 bits (90), Expect = 0.15,   Method: Composition-based stats.
 Identities = 16/57 (28%), Positives = 20/57 (35%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          +I S   A SGL     RM ++  NIAN  TTG       +               G
Sbjct: 1  MIRSMFSAVSGLKGHQTRMDVVGNNIANVNTTGFKASRVTFADMISQNLSGASSPTG 57


>gi|258625234|ref|ZP_05720146.1| Flagellar hook protein flgE [Vibrio mimicus VM603]
 gi|258582481|gb|EEW07318.1| Flagellar hook protein flgE [Vibrio mimicus VM603]
          Length = 398

 Score = 52.6 bits (124), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/105 (17%), Positives = 31/105 (29%), Gaps = 5/105 (4%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQS-----TFVEEFDPGHPVAN 85
           N          +  R+  +         G  +V      QS       +     G     
Sbjct: 292 NGMVYATYDNGESQRQGQVVLANFADPQGLSKVNDTAWTQSFSSGAPIMGIPGTGSLGEL 351

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           A G ++  NV++  E   +    R Y AN +TI     +     +
Sbjct: 352 APGSLEGSNVDLTSELVSLMTAQRNYQANAKTISTGDKLTQALFN 396



 Score = 41.0 bits (94), Expect = 0.054,   Method: Composition-based stats.
 Identities = 15/40 (37%), Positives = 19/40 (47%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR 46
          S +IA SGL   +  +  IS NIANA T G       +  
Sbjct: 2  SFNIALSGLDATNKELNTISNNIANASTFGFKGSRTEFAA 41


>gi|218674739|ref|ZP_03524408.1| flagellar hook protein FlgE [Rhizobium etli GR56]
          Length = 433

 Score = 52.6 bits (124), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 31/82 (37%)

Query: 52  EEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
            + +    G      G    T              SG ++  NV++  E  +M E+ R Y
Sbjct: 352 PDKLTLMSGNVYSANGQSGVTVTGFPQTNGLGTIKSGALEGSNVDLAGELTEMIESQRSY 411

Query: 112 MANLQTIKQSHDMMTTTLDLLR 133
            AN +  +   D+M   ++L R
Sbjct: 412 TANSKVFQTGSDIMDVLVNLKR 433



 Score = 48.7 bits (114), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/116 (19%), Positives = 41/116 (35%), Gaps = 2/116 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             +  S   A SG+  Q+ R+  +++NIAN  T+G    S  +    +      + SGGV
Sbjct: 1   MSIFGSMKTAVSGMNAQANRLSTVADNIANVNTSGYKAVSTSFSSLVLPSSGGNYNSGGV 60

Query: 62  R--VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
           +  V++   DQ              +  G       +         +  +    NL
Sbjct: 61  QTSVRQAVSDQGDISYTTSTTDLAISGDGFFIVQGADGTPVLTRAGDFQKDDEGNL 116


>gi|254519414|ref|ZP_05131470.1| flagellar hook protein [Clostridium sp. 7_2_43FAA]
 gi|226913163|gb|EEH98364.1| flagellar hook protein [Clostridium sp. 7_2_43FAA]
          Length = 885

 Score = 52.6 bits (124), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 26/49 (53%)

Query: 85  NASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           N  G+++  NV++  +  DM  ++R + A  + I    +++   ++L R
Sbjct: 837 NLQGMLEMSNVDLSEQFTDMIVSSRAFQAAGKMITTGDEILQDIINLKR 885



 Score = 35.6 bits (80), Expect = 2.4,   Method: Composition-based stats.
 Identities = 14/69 (20%), Positives = 28/69 (40%), Gaps = 4/69 (5%)

Query: 3  YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY----RRKTISFEEVMHGS 58
          +++ S +   SG+ V   ++ +I  NI+N  TT        +     +         +  
Sbjct: 6  FMLRSMYSGISGMKVNQTKLDVIGNNISNVGTTSFKSSRARFSDMLSQNVSDAMAPSNNQ 65

Query: 59 GGVRVKKIG 67
          GGV   ++G
Sbjct: 66 GGVNASQVG 74


>gi|157373207|ref|YP_001471807.1| flagellar hook protein FlgE [Shewanella sediminis HAW-EB3]
 gi|157315581|gb|ABV34679.1| flagellar basal body FlaE [Shewanella sediminis HAW-EB3]
          Length = 398

 Score = 52.6 bits (124), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 15/105 (14%), Positives = 32/105 (30%), Gaps = 5/105 (4%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQS-----TFVEEFDPGHPVAN 85
           N    G         +  +   +  + +G   V       +       V     G   + 
Sbjct: 292 NGMVYGTYTNGQEQIQGQVVLADFNNPNGLTPVSNNAWAATNAAGQPIVGAPTTGTLGSV 351

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           + G ++  NV+   E   +    R Y +N + +  +  M    L+
Sbjct: 352 SGGYLEGSNVDTTAEMVSLMTAQRNYQSNAKVLDANSTMQQALLN 396



 Score = 39.5 bits (90), Expect = 0.16,   Method: Composition-based stats.
 Identities = 15/38 (39%), Positives = 20/38 (52%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          S +IA SGL   +  +  IS NIAN+ T G   G   +
Sbjct: 2  SFNIALSGLQATTQDLNTISNNIANSSTVGYRGGRSEF 39


>gi|317492428|ref|ZP_07950857.1| fagellar hook-basal body protein [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316919767|gb|EFV41097.1| fagellar hook-basal body protein [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 414

 Score = 52.6 bits (124), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/83 (25%), Positives = 33/83 (39%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +  E +   G    K+        V         A  SG V+  NV++  E  +M    
Sbjct: 331 FANPEGLQSEGNNMWKESATSGQAIVGVAGASGLGALTSGAVEASNVDLSKELVNMIVAQ 390

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y +N QTIK    ++ T ++L
Sbjct: 391 RNYQSNAQTIKTQDQILQTLVNL 413



 Score = 33.7 bits (75), Expect = 8.8,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 29/72 (40%), Gaps = 4/72 (5%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
            + A SGL   ++ + +I  NIAN++T G   GS  +               GV+V  +
Sbjct: 2  GFNQAVSGLNAAASNLDVIGNNIANSQTVGFKSGSVTFA----DMFAGSKVGLGVKVASV 57

Query: 67 GVDQSTFVEEFD 78
            D +  +    
Sbjct: 58 QQDFTDGITTTT 69


>gi|254524254|ref|ZP_05136309.1| flagellar biosynthesis hook protein [Stenotrophomonas sp. SKA14]
 gi|219721845|gb|EED40370.1| flagellar biosynthesis hook protein [Stenotrophomonas sp. SKA14]
          Length = 407

 Score = 52.6 bits (124), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 10/61 (16%), Positives = 24/61 (39%)

Query: 71  STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           +      D  +     +G ++   V++  +  +M    R + AN Q I     +  T ++
Sbjct: 346 TPRTGMPDTSNLGKIQAGSLEASTVDLTEQLVNMITAQRNFQANAQMITTQDQITQTVIN 405

Query: 131 L 131
           +
Sbjct: 406 I 406



 Score = 34.1 bits (76), Expect = 6.2,   Method: Composition-based stats.
 Identities = 9/82 (10%), Positives = 28/82 (34%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
            +++ SG+   ++ + + + N+AN  TTG       +     +    +  +      ++
Sbjct: 2  GFNVSLSGINAANSDLSVTANNVANVNTTGFKESRAEFADLFSATGYGLSKNAVGSGVRV 61

Query: 67 GVDQSTFVEEFDPGHPVANASG 88
                F +  +     +    
Sbjct: 62 SNVAQQFKQGHNEQTGRSLDMA 83


>gi|222530299|ref|YP_002574181.1| flagellar basal body rod protein [Caldicellulosiruptor bescii DSM
           6725]
 gi|222457146|gb|ACM61408.1| flagellar basal body rod protein [Caldicellulosiruptor bescii DSM
           6725]
          Length = 255

 Score = 52.6 bits (124), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 19/44 (43%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            G ++  NVN + E  +M    R Y AN +      + +   ++
Sbjct: 207 QGYLEGSNVNSVQEMVNMISVLRAYEANQKAFVIQDETLQKAVN 250



 Score = 34.1 bits (76), Expect = 6.3,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 18/39 (46%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSD 42
          +I   + + SG+ +    M I + N+AN  TTG      
Sbjct: 1  MIRGIYTSASGMILNQKLMDITANNVANVSTTGFKRDVA 39


>gi|90415318|ref|ZP_01223252.1| flagellar hook protein FlgE [marine gamma proteobacterium HTCC2207]
 gi|90332641|gb|EAS47811.1| flagellar hook protein FlgE [marine gamma proteobacterium HTCC2207]
          Length = 944

 Score = 52.6 bits (124), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 20/41 (48%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NV++  E  D+    R + AN + I+ S  +  T + +
Sbjct: 902 ERSNVDLTAELVDLITAQRNFQANAKAIETSSSLTQTIIQI 942



 Score = 33.7 bits (75), Expect = 8.0,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 19/38 (50%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          S + + +GL   + ++ + S NIAN+ T G       +
Sbjct: 2  SFYTSLTGLNAATTQLAVTSNNIANSGTGGFKRSDTDF 39


>gi|163850063|ref|YP_001638106.1| flagellar basal body rod protein FlgG [Methylobacterium extorquens
           PA1]
 gi|218528666|ref|YP_002419482.1| flagellar basal body rod protein FlgG [Methylobacterium
           chloromethanicum CM4]
 gi|240137197|ref|YP_002961666.1| flagellar biosynthesis; cell-distal portion of basal-body rod
           [Methylobacterium extorquens AM1]
 gi|254559209|ref|YP_003066304.1| cell-distal portion of basal-body rod biosynthesis protein
           [Methylobacterium extorquens DM4]
 gi|163661668|gb|ABY29035.1| flagellar basal-body rod protein FlgG [Methylobacterium extorquens
           PA1]
 gi|218520969|gb|ACK81554.1| flagellar basal-body rod protein FlgG [Methylobacterium
           chloromethanicum CM4]
 gi|240007163|gb|ACS38389.1| flagellar biosynthesis; cell-distal portion of basal-body rod
           [Methylobacterium extorquens AM1]
 gi|254266487|emb|CAX22251.1| flagellar biosynthesis; cell-distal portion of basal-body rod
           [Methylobacterium extorquens DM4]
          Length = 262

 Score = 52.6 bits (124), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 12/112 (10%), Positives = 30/112 (26%)

Query: 16  AVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVE 75
                 +    +  A                   + +  +   G    ++     +  V 
Sbjct: 145 NTTQVTINESGQVFAKIDGQVALQNVGQLTLANFANDSGLEPLGNGLYRETPASGAPVVG 204

Query: 76  EFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
                       G ++  NV+ + E   +    R +  N + I+ + +M  T
Sbjct: 205 NPGDVSYGKLQQGYLEGSNVDPVKEITSLITAQRAFEMNSKVIQAADEMAGT 256



 Score = 42.6 bits (98), Expect = 0.019,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 22/40 (55%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          + +  IA +G++ Q   +++I+ NIAN  TTG       +
Sbjct: 1  MRALAIAATGMSAQQLNLEVIANNIANLNTTGFKGARAEF 40


>gi|313681187|ref|YP_004058925.1| flagellar hook-basal body protein [Sulfuricurvum kujiense DSM
           16994]
 gi|313154047|gb|ADR32725.1| flagellar hook-basal body protein [Sulfuricurvum kujiense DSM
           16994]
          Length = 445

 Score = 52.6 bits (124), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 24/48 (50%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +SG ++  NV + V   DM    R Y AN +T+    +M+   L + +
Sbjct: 398 SSGHLENSNVRMEVGLTDMIVMQRAYQANAKTVTTVDEMIQKALSMRK 445


>gi|317047691|ref|YP_004115339.1| flagellar hook-basal body protein [Pantoea sp. At-9b]
 gi|316949308|gb|ADU68783.1| flagellar hook-basal body protein [Pantoea sp. At-9b]
          Length = 406

 Score = 52.6 bits (124), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 32/83 (38%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            S  E +   G              +     G   +  +G ++  NV++  E  +M    
Sbjct: 323 FSNPEGLQSEGDNVWSATSSSGQAAIGTAGTGTFGSLTAGALEASNVDLSQELVNMIVAQ 382

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y AN QTIK    ++ T ++L
Sbjct: 383 RNYQANAQTIKTQDQILNTLVNL 405


>gi|118444095|ref|YP_878000.1| flagellar basal body rod protein FlgG [Clostridium novyi NT]
 gi|118134551|gb|ABK61595.1| flagellar basal-body rod protein FlgG [Clostridium novyi NT]
          Length = 258

 Score = 52.6 bits (124), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 17/100 (17%), Positives = 31/100 (31%)

Query: 32  ARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVK 91
               G   G      +   FE   +         + V     +         +   G  +
Sbjct: 156 INEEGYVVGKGNENLRIPIFEPKGNDCMKSIGDNLYVCNEPNLIVEKDTKDFSLLQGYTE 215

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             NV++  E AD+  T R +  N   +K + +M     +L
Sbjct: 216 QSNVDLGKEMADLIITQRAFQLNSSALKTADEMWGMANNL 255



 Score = 38.7 bits (88), Expect = 0.26,   Method: Composition-based stats.
 Identities = 11/35 (31%), Positives = 20/35 (57%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDT 38
          ++ S   + SG+A +  ++  IS N+AN+ T G  
Sbjct: 1  MLRSIWNSRSGMAAEMEKLNTISNNMANSTTVGYK 35


>gi|160880840|ref|YP_001559808.1| hypothetical protein Cphy_2708 [Clostridium phytofermentans ISDg]
 gi|160429506|gb|ABX43069.1| protein of unknown function DUF1078 domain protein [Clostridium
           phytofermentans ISDg]
          Length = 479

 Score = 52.6 bits (124), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 23/44 (52%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  NV++  +  +M  T R + AN + I  S  ++   ++L R
Sbjct: 436 LEMSNVDLSQQFTEMITTQRGFQANSRIITTSDTLLEELINLKR 479



 Score = 36.4 bits (82), Expect = 1.2,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 20/41 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          ++ S +   SGL V   +M +I  NI+N  T G    S  +
Sbjct: 1  MMRSLYSGVSGLRVHQTKMDVIGNNISNVNTVGFKASSATF 41


>gi|119385423|ref|YP_916479.1| hypothetical protein Pden_2696 [Paracoccus denitrificans PD1222]
 gi|119375190|gb|ABL70783.1| protein of unknown function DUF1078 domain protein [Paracoccus
           denitrificans PD1222]
          Length = 446

 Score = 52.6 bits (124), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 22/43 (51%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +    +V  E  D+ +T R Y +N + I+   +M+  T +L R
Sbjct: 404 EASTTDVAAELTDLIQTQRAYTSNAKVIQTVDEMLQETANLKR 446



 Score = 37.5 bits (85), Expect = 0.61,   Method: Composition-based stats.
 Identities = 20/93 (21%), Positives = 34/93 (36%), Gaps = 4/93 (4%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            + ++     SGLA  S R+  IS+NIAN+ T G       +    I+           
Sbjct: 1  MSISSALSAGVSGLAANSTRLATISDNIANSGTYGYKRVDTSFESMVINQGRGGGLYTAN 60

Query: 62 RV----KKIGVDQSTFVEEFDPGHPVANASGIV 90
           V     +I  ++   V    P     +  G++
Sbjct: 61 GVRAATSRIVDERGNLVPTSHPLDIAISGRGML 93


>gi|254294563|ref|YP_003060586.1| hypothetical protein Hbal_2209 [Hirschia baltica ATCC 49814]
 gi|254043094|gb|ACT59889.1| protein of unknown function DUF1078 domain protein [Hirschia
           baltica ATCC 49814]
          Length = 458

 Score = 52.6 bits (124), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 9/44 (20%), Positives = 22/44 (50%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++   V++  E +++  T R Y A  + I  + +M+   + + R
Sbjct: 415 LESSTVDLAEEFSNLIVTQRAYSAASKIITTADEMLNELISIKR 458


>gi|4928060|gb|AAD33398.1|AF129422_1 flagellar hook protein FlgE [Sinorhizobium meliloti]
          Length = 396

 Score = 52.6 bits (124), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 15/84 (17%), Positives = 30/84 (35%)

Query: 50  SFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNR 109
              + +    G    +              G      SG ++  NV++  E   M E+ R
Sbjct: 313 QSPDKLKPESGNVYSQGVDSGVIITGFAGSGDFGEILSGALESSNVDIAEELTAMIESQR 372

Query: 110 LYMANLQTIKQSHDMMTTTLDLLR 133
            Y AN +  +   +++   ++L R
Sbjct: 373 NYTANSKVFQTGSELLEVLVNLKR 396



 Score = 46.0 bits (107), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/58 (32%), Positives = 28/58 (48%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
               SG+  QS R+  ++ENIANA TTG    S  +    +      + SGGV+ + 
Sbjct: 1  MRTGVSGMNAQSNRLSTVAENIANANTTGYKRASTEFSSMILPSGNGSYNSGGVQTEV 58


>gi|291280053|ref|YP_003496888.1| flagellar basal-body rod protein [Deferribacter desulfuricans SSM1]
 gi|290754755|dbj|BAI81132.1| flagellar basal-body rod protein [Deferribacter desulfuricans SSM1]
          Length = 205

 Score = 52.6 bits (124), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 15/52 (28%), Positives = 25/52 (48%)

Query: 79  PGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           P +      G ++  NV++  E  DM  T   + ANL+T K   +M+   +D
Sbjct: 151 PENSYEILPGYLEASNVDLAKEIVDMIVTKNYFEANLKTTKVIDEMLGNIID 202


>gi|188586026|ref|YP_001917571.1| protein of unknown function DUF1078 domain protein [Natranaerobius
           thermophilus JW/NM-WN-LF]
 gi|179350713|gb|ACB84983.1| protein of unknown function DUF1078 domain protein [Natranaerobius
           thermophilus JW/NM-WN-LF]
          Length = 508

 Score = 52.6 bits (124), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 14/84 (16%), Positives = 30/84 (35%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +    +   G    +               G     A G ++  NV++  +  DM  T 
Sbjct: 424 FTNPGGLEKLGSGLYQPTRNSGEPSYGIAGTGGRGEIAPGALEMSNVDMGEQFTDMIVTQ 483

Query: 109 RLYMANLQTIKQSHDMMTTTLDLL 132
           R + AN ++I    +++   ++L 
Sbjct: 484 RGFQANSRSITTGDEVLQELVNLK 507



 Score = 40.6 bits (93), Expect = 0.066,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 27/67 (40%), Gaps = 3/67 (4%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY---RRKTISFEEVMHGSGG 60
          ++ S +   SGL     R+  I  N+AN  T G       +     +T+      +  GG
Sbjct: 1  MLRSMYSGVSGLRNHQTRLDTIGNNVANVNTAGFKGDRVTFQDAFNQTLEAASAPNERGG 60

Query: 61 VRVKKIG 67
             +++G
Sbjct: 61 TNPQQVG 67


>gi|78357998|ref|YP_389447.1| flagellar basal-body rod protein [Desulfovibrio desulfuricans
           subsp. desulfuricans str. G20]
 gi|78220403|gb|ABB39752.1| flagellar basal-body rod protein, putative [Desulfovibrio
           desulfuricans subsp. desulfuricans str. G20]
          Length = 125

 Score = 52.6 bits (124), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/122 (24%), Positives = 42/122 (34%), Gaps = 13/122 (10%)

Query: 14  GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQS-- 71
            L   S R  + ++NIANA T G         R      E      GV+V  I   Q   
Sbjct: 9   ALNAFSMRQAVTADNIANASTDG--------FRSREVVLETGPQDQGVQVADIRRRQESQ 60

Query: 72  ---TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
                  E         A       + +++ E+  M E  R Y AN   I+   +M  T 
Sbjct: 61  AMDELRREQALNAETHGAQEPAAPSDTDLVRESVTMMENQRAYEANAAAIRAQDEMTGTF 120

Query: 129 LD 130
           +D
Sbjct: 121 ID 122


>gi|257457611|ref|ZP_05622778.1| flagellar hook protein FlgE [Treponema vincentii ATCC 35580]
 gi|257444997|gb|EEV20073.1| flagellar hook protein FlgE [Treponema vincentii ATCC 35580]
          Length = 463

 Score = 52.6 bits (124), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 15/44 (34%), Positives = 25/44 (56%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  NV++  +  DM  T R + A  +TI+ S  M+ T L+L R
Sbjct: 420 LEMSNVDLTDQFTDMIITQRGFQAGAKTIQTSDTMLETVLNLKR 463



 Score = 40.2 bits (92), Expect = 0.095,   Method: Composition-based stats.
 Identities = 14/42 (33%), Positives = 20/42 (47%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S     SG+     RM +I  NIAN  TTG   G   ++
Sbjct: 1  MMRSLFSGVSGMQNHQTRMDVIGNNIANVNTTGFKRGRVNFQ 42


>gi|237653583|ref|YP_002889897.1| flagellar basal body FlaE domain protein [Thauera sp. MZ1T]
 gi|237624830|gb|ACR01520.1| flagellar basal body FlaE domain protein [Thauera sp. MZ1T]
          Length = 450

 Score = 52.6 bits (124), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/140 (17%), Positives = 44/140 (31%), Gaps = 11/140 (7%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANAR-----------TTGDTPGSDPYRRKTISF 51
                  I  S L  +  +       +A              T G+T        +T   
Sbjct: 310 DFSDMRQIGGSYLITELTQDGYTGGELAGVSVGRDGIVTGRYTNGETRELAQLALQTFRN 369

Query: 52  EEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
              +   G    +       T   +   G     ++G+++  NV +  E   M    R Y
Sbjct: 370 PNALLSIGNNFWEATTESGLTAPSKAGEGVAGVVSAGMIEDANVELTNELVQMIVQQRNY 429

Query: 112 MANLQTIKQSHDMMTTTLDL 131
            AN Q+IK    ++ T ++L
Sbjct: 430 QANAQSIKAQDQVLQTLVNL 449


>gi|167463160|ref|ZP_02328249.1| flagellar basal-body rod protein [Paenibacillus larvae subsp.
           larvae BRL-230010]
 gi|322383080|ref|ZP_08056907.1| flagellar basal-body rod-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
 gi|321152742|gb|EFX45368.1| flagellar basal-body rod-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
          Length = 297

 Score = 52.6 bits (124), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 17/100 (17%), Positives = 31/100 (31%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           N     +              +       G  +  +  +     E+  PG  V    G V
Sbjct: 193 NGYPYMNANEEPVRIGLAKVSDPHKLMHEGNGLYYLNQEDQALAEDVQPGDNVMIRQGFV 252

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           +  NV+      DM    R Y AN + ++     +  T++
Sbjct: 253 EQSNVDPTQVMVDMMSALRAYEANQKMVQFYDKSLEKTVN 292



 Score = 37.9 bits (86), Expect = 0.44,   Method: Composition-based stats.
 Identities = 19/101 (18%), Positives = 32/101 (31%), Gaps = 12/101 (11%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           ++   + A+SG+  Q  +    + NIAN  T G                  +  S    +
Sbjct: 1   MLRGLYTASSGMIAQQRKHDTATNNIANMNTPG------------YKQSTALSRSFPEML 48

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
                D  T  ++    H        V  P   V+ ET + 
Sbjct: 49  ISRFRDDETGTQQVGRLHTGVLMEENVAIPVQGVIEETRNP 89


>gi|119947175|ref|YP_944855.1| flagellar basal-body rod protein FlgG [Psychromonas ingrahamii 37]
 gi|119865779|gb|ABM05256.1| flagellar basal-body rod protein FlgG [Psychromonas ingrahamii 37]
          Length = 261

 Score = 52.6 bits (124), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 14/78 (17%), Positives = 25/78 (32%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
           T      +   GG          +                G ++  NV V+ E  DM  T
Sbjct: 177 TFMNPSGLMAKGGNLFSATESSGAANELTAGLDGAGIIKQGALEGSNVQVVEEMVDMIST 236

Query: 108 NRLYMANLQTIKQSHDMM 125
            R Y  + + +  + +M+
Sbjct: 237 QRAYEMSAKMVSAADEML 254



 Score = 40.6 bits (93), Expect = 0.071,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 22/41 (53%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          + ++  I+ +G+A Q A+M  IS N+AN  T G       +
Sbjct: 1  MNSALWISKTGMAAQDAKMTAISNNLANINTVGFKRDRVVF 41


>gi|90408060|ref|ZP_01216231.1| flagellar hook protein [Psychromonas sp. CNPT3]
 gi|90310817|gb|EAS38931.1| flagellar hook protein [Psychromonas sp. CNPT3]
          Length = 473

 Score = 52.6 bits (124), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 22/102 (21%), Positives = 37/102 (36%), Gaps = 2/102 (1%)

Query: 32  ARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQS--TFVEEFDPGHPVANASGI 89
            + T     S P  R +I       G        I    S      E + G   A  S  
Sbjct: 371 VKATYSNGTSQPLSRVSIVRFRNEQGLTQTGSSWIATQNSGEPLAGEANSGSFGAVNSAA 430

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           ++  NVN+  E  D+    R + AN + ++ ++ +  T L +
Sbjct: 431 LEQSNVNLTTELVDLITAQRNFQANSRALEINNTLQQTILQI 472



 Score = 40.6 bits (93), Expect = 0.075,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 17/38 (44%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          S +IA SG++     +   + NIAN  T G       +
Sbjct: 2  SFNIALSGISAAQTDLDSTANNIANVNTVGFKESRAEF 39


>gi|126462483|ref|YP_001043597.1| hypothetical protein Rsph17029_1715 [Rhodobacter sphaeroides ATCC
           17029]
 gi|126104147|gb|ABN76825.1| protein of unknown function DUF1078 domain protein [Rhodobacter
           sphaeroides ATCC 17029]
          Length = 251

 Score = 52.6 bits (124), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 27/67 (40%)

Query: 67  GVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           G  ++       P        G+++  NVN + E     E  R +  NL+ I  + ++  
Sbjct: 182 GRIRAGGEPLPPPDQRARVLQGVLEGSNVNTMEELVSSIELQRTFELNLRMISSAKELDE 241

Query: 127 TTLDLLR 133
           +   LLR
Sbjct: 242 SGARLLR 248


>gi|209547946|ref|YP_002279863.1| flagellar hook protein FlgE [Rhizobium leguminosarum bv. trifolii
           WSM2304]
 gi|209533702|gb|ACI53637.1| protein of unknown function DUF1078 domain protein [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 433

 Score = 52.6 bits (124), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 31/82 (37%)

Query: 52  EEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
            + +    G      G    T              SG ++  NV++  E  +M E+ R Y
Sbjct: 352 PDKLTLMSGNVYSANGQSGVTVTGFPQTNGLGTIKSGALEGSNVDLAGELTEMIESQRSY 411

Query: 112 MANLQTIKQSHDMMTTTLDLLR 133
            AN +  +   D+M   ++L R
Sbjct: 412 TANSKVFQTGSDIMDVLVNLKR 433



 Score = 48.3 bits (113), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 18/61 (29%), Positives = 29/61 (47%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            +  S   A SG+  Q+ R+  +++NIAN  TTG    S  +    +      + SGGV
Sbjct: 1  MSIFGSMKTAVSGMNAQANRLSTVADNIANVNTTGYKAVSTSFSSLVLPSSGGNYNSGGV 60

Query: 62 R 62
          +
Sbjct: 61 Q 61


>gi|78776233|ref|YP_392548.1| flagellar hook protein FlgE [Sulfurimonas denitrificans DSM 1251]
 gi|78496773|gb|ABB43313.1| Flagellar hook FlgE [Sulfurimonas denitrificans DSM 1251]
          Length = 718

 Score = 52.6 bits (124), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 16/100 (16%), Positives = 34/100 (34%)

Query: 34  TTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
           + G + G         +  E +   GG    +        +            +  ++  
Sbjct: 619 SNGRSFGLAQIGMAKFTNNEGLSTEGGNVYVQTANSGDPIIGTAATAGRGFMQAAALEAS 678

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           NV++ +    +    R Y AN +TI  S  ++ T + L +
Sbjct: 679 NVDLSLALTQLIIIQRGYQANGKTITTSDQLLQTLIGLKQ 718



 Score = 33.7 bits (75), Expect = 7.9,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 22/68 (32%), Gaps = 4/68 (5%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY----RRKTISFEEVMHGSG 59
          ++ S     SGL      M + S NIAN  T G       +     +            G
Sbjct: 1  MLKSLFAGVSGLQSHQVAMDVESNNIANVNTVGYKYSRANFSDLLAQTRAIATAPQGELG 60

Query: 60 GVRVKKIG 67
          G    ++G
Sbjct: 61 GKNPVQVG 68


>gi|318604252|emb|CBY25750.1| flagellar hook protein FlgE [Yersinia enterocolitica subsp.
           palearctica Y11]
          Length = 397

 Score = 52.2 bits (123), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 14/84 (16%), Positives = 27/84 (32%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +    +    G          +  +     G      +G ++  NV++  E   +    
Sbjct: 314 FANPNGLATQNGTTWSVTSRSGAPLLGSPGTGLLGNIVAGALEASNVDLTAELVGLMTAQ 373

Query: 109 RLYMANLQTIKQSHDMMTTTLDLL 132
           R Y AN + I  +  MM     +L
Sbjct: 374 RNYQANTKIISTNDSMMNALFQVL 397



 Score = 40.6 bits (93), Expect = 0.070,   Method: Composition-based stats.
 Identities = 21/84 (25%), Positives = 33/84 (39%), Gaps = 1/84 (1%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          S  IAN+GL+  + ++  IS NIAN+ T G   G   +       + +  G  G   + I
Sbjct: 2  SFSIANTGLSAVTEQLNTISNNIANSGTKGFKSGRTEFASMYAQSQPLGVGVSGTS-QSI 60

Query: 67 GVDQSTFVEEFDPGHPVANASGIV 90
            D S           ++     V
Sbjct: 61 KKDGSIDRTGNAMDLAISGNGFFV 84


>gi|238758110|ref|ZP_04619290.1| Flagellar hook protein FlgE [Yersinia aldovae ATCC 35236]
 gi|238703648|gb|EEP96185.1| Flagellar hook protein FlgE [Yersinia aldovae ATCC 35236]
          Length = 428

 Score = 52.2 bits (123), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 35/83 (42%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            S  E +   G    K+     +  +     G   +  SG ++  NV++  E  +M    
Sbjct: 345 FSNPEGLASQGDNVWKETQSSGNPILGTAGGGGFGSLTSGALESSNVDLSKELVNMIVAQ 404

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y +N QTIK    ++ T ++L
Sbjct: 405 RNYQSNAQTIKTQDQILQTLVNL 427



 Score = 36.0 bits (81), Expect = 1.8,   Method: Composition-based stats.
 Identities = 19/63 (30%), Positives = 26/63 (41%), Gaps = 4/63 (6%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
              A SGL   S+ + +I  NIAN+ T+G   GS  +               GV+V  I
Sbjct: 2  GFSQAVSGLNAASSNLDVIGNNIANSATSGFKAGSVSFA----DMFAGSQTGMGVKVAGI 57

Query: 67 GVD 69
            D
Sbjct: 58 TQD 60


>gi|307318929|ref|ZP_07598360.1| fagellar hook-basal body protein [Sinorhizobium meliloti AK83]
 gi|306895343|gb|EFN26098.1| fagellar hook-basal body protein [Sinorhizobium meliloti AK83]
          Length = 402

 Score = 52.2 bits (123), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 15/84 (17%), Positives = 30/84 (35%)

Query: 50  SFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNR 109
              + +    G    +              G      SG ++  NV++  E   M E+ R
Sbjct: 319 QSPDKLRPESGNVYSQGVDSGVIITGFAGSGDFGEILSGALESSNVDIAEELTAMIESQR 378

Query: 110 LYMANLQTIKQSHDMMTTTLDLLR 133
            Y AN +  +   +++   ++L R
Sbjct: 379 NYTANSKVFQTGSELLEVLVNLKR 402



 Score = 48.7 bits (114), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 20/64 (31%), Positives = 30/64 (46%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            L  +     SG+  QS R+  ++ENIANA TTG    S  +    +      + SGGV
Sbjct: 1  MSLYGTMRTGVSGMNAQSNRLSTVAENIANANTTGYKRASTEFSSMILPSGNGSYNSGGV 60

Query: 62 RVKK 65
          + + 
Sbjct: 61 QTEV 64


>gi|188588515|ref|YP_001920211.1| flagellar hook protein FlgE [Clostridium botulinum E3 str. Alaska
           E43]
 gi|188498796|gb|ACD51932.1| flagellar hook protein FlgE [Clostridium botulinum E3 str. Alaska
           E43]
          Length = 364

 Score = 52.2 bits (123), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 24/47 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NV++  +  DM    R + A+ + I  + +++ T   L+R
Sbjct: 318 QGALEASNVDLTEQFTDMITATRAFQASSKMISTADEILQTITGLMR 364



 Score = 38.7 bits (88), Expect = 0.26,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 29/68 (42%), Gaps = 4/68 (5%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY----RRKTISFEEVMHGSG 59
          ++ S +   SG+     ++ +I  NIAN  TTG    S  +     + T S        G
Sbjct: 1  MLRSMYSGISGMKANQVKLDVIGNNIANVSTTGFKSSSARFTDMLYQNTSSATAPTSTKG 60

Query: 60 GVRVKKIG 67
          G   K++G
Sbjct: 61 GTNAKQVG 68


>gi|163738060|ref|ZP_02145476.1| flagellar basal-body rod protein FlgG [Phaeobacter gallaeciensis
           BS107]
 gi|163742544|ref|ZP_02149930.1| flagellar basal-body rod protein FlgG [Phaeobacter gallaeciensis
           2.10]
 gi|161384129|gb|EDQ08512.1| flagellar basal-body rod protein FlgG [Phaeobacter gallaeciensis
           2.10]
 gi|161388676|gb|EDQ13029.1| flagellar basal-body rod protein FlgG [Phaeobacter gallaeciensis
           BS107]
          Length = 261

 Score = 52.2 bits (123), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 13/82 (15%), Positives = 26/82 (31%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +  + +   G     +     +  V             G ++  +V+ + E  ++ E  
Sbjct: 178 FANPKGLEALGSNLFVETEASGAATVASPGENGLGTLRQGYLEASSVDAVREVTELIEAQ 237

Query: 109 RLYMANLQTIKQSHDMMTTTLD 130
           R Y  N + I     MM  T  
Sbjct: 238 RGYEMNAKVISAVDQMMGATTQ 259



 Score = 44.9 bits (104), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 21/41 (51%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          + +  IA +G+  Q  R++ IS N+AN  TTG       + 
Sbjct: 1  MRALKIAATGMTAQQLRVETISNNLANMNTTGYNARRAEFA 41


>gi|251780952|ref|ZP_04823872.1| flagellar hook protein FlgE [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
 gi|243085267|gb|EES51157.1| flagellar hook protein FlgE [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
          Length = 364

 Score = 52.2 bits (123), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 24/47 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NV++  +  DM    R + A+ + I  + +++ T   L+R
Sbjct: 318 QGALEASNVDLTEQFTDMITATRAFQASSKMISTADEILQTITGLMR 364



 Score = 38.7 bits (88), Expect = 0.28,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 29/68 (42%), Gaps = 4/68 (5%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY----RRKTISFEEVMHGSG 59
          ++ S +   SG+     ++ +I  NIAN  TTG    S  +     + T S        G
Sbjct: 1  MLRSMYSGISGMKANQVKLDVIGNNIANVSTTGFKSSSARFTDMLYQNTSSATAPTSTKG 60

Query: 60 GVRVKKIG 67
          G   K++G
Sbjct: 61 GTNAKQVG 68


>gi|187935288|ref|YP_001885050.1| flagellar hook protein FlgE [Clostridium botulinum B str. Eklund
           17B]
 gi|187723441|gb|ACD24662.1| flagellar hook protein FlgE [Clostridium botulinum B str. Eklund
           17B]
          Length = 364

 Score = 52.2 bits (123), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 24/47 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NV++  +  DM    R + A+ + I  + +++ T   L+R
Sbjct: 318 QGALEASNVDLTEQFTDMITATRAFQASSKMISTADEILQTITGLMR 364



 Score = 36.0 bits (81), Expect = 1.6,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 28/68 (41%), Gaps = 4/68 (5%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY----RRKTISFEEVMHGSG 59
          ++ S +   SG+     ++ +I  NIAN  TTG    S  +     +   S        G
Sbjct: 1  MLRSMYSGISGMKSNQVKLDVIGNNIANVSTTGFKSSSARFTDMLYQNVSSATAPTSTKG 60

Query: 60 GVRVKKIG 67
          G   K++G
Sbjct: 61 GTNAKQVG 68


>gi|152985192|ref|YP_001349650.1| flagellar hook protein FlgE [Pseudomonas aeruginosa PA7]
 gi|150960350|gb|ABR82375.1| flagellar hook protein [Pseudomonas aeruginosa PA7]
          Length = 462

 Score = 52.2 bits (123), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 27/64 (42%)

Query: 68  VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
                 V     G   A  SG ++  NV++  E  ++    R Y AN +TI+    +  T
Sbjct: 398 ESGEPAVGAPRSGTLGALQSGALEASNVDISSELVNLIVHQRNYQANAKTIQTEDAVTQT 457

Query: 128 TLDL 131
            ++L
Sbjct: 458 IINL 461



 Score = 35.2 bits (79), Expect = 3.3,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 18/39 (46%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          S +I  SG+   S+ + +   NIANA T G       + 
Sbjct: 2  SFNIGLSGIQAASSGLNVTGNNIANAGTVGFKQSRAEFA 40


>gi|300114799|ref|YP_003761374.1| fagellar hook-basal body protein [Nitrosococcus watsonii C-113]
 gi|299540736|gb|ADJ29053.1| fagellar hook-basal body protein [Nitrosococcus watsonii C-113]
          Length = 425

 Score = 52.2 bits (123), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 19/127 (14%), Positives = 45/127 (35%), Gaps = 13/127 (10%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           +    I+ +G         +I  N +N + +     +           ++ + + G  V 
Sbjct: 311 LTGLDISKTG---------VIQANYSNGQNSTLGKVALAQFPNEQGLRQLGNNAWGETVS 361

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
                 S    E   G      +G ++  NV++  E   +    R + AN + I+ +  +
Sbjct: 362 S----GSALAGEAGVGSFGTIQTGALESSNVDLTAELVHLITAQRNFQANAKAIETASTI 417

Query: 125 MTTTLDL 131
             T +++
Sbjct: 418 TDTIINI 424



 Score = 36.0 bits (81), Expect = 1.5,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 20/39 (51%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          + + + SGL   S+ + + + NIANA TTG       + 
Sbjct: 2  AFNTSLSGLNAASSDLDVTAHNIANASTTGFKRSRSEFA 40


>gi|224418355|ref|ZP_03656361.1| flagellar hook protein FlgE [Helicobacter canadensis MIT 98-5491]
          Length = 727

 Score = 52.2 bits (123), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 20/46 (43%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
           +++  NV+      D+    R Y  + ++I  +  +M   + L R 
Sbjct: 682 MLETSNVDTGTALTDLIVYQRGYQMSAKSITTADQLMQEAIQLKRS 727


>gi|254462012|ref|ZP_05075428.1| flagellar basal-body rod protein FlgG [Rhodobacterales bacterium
           HTCC2083]
 gi|206678601|gb|EDZ43088.1| flagellar basal-body rod protein FlgG [Rhodobacteraceae bacterium
           HTCC2083]
          Length = 261

 Score = 52.2 bits (123), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 11/83 (13%), Positives = 27/83 (32%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +  + +   G     +      + V             G ++  +V+ + E  ++ E  
Sbjct: 178 FTNAKGLEAIGSNLFMETEASGPSQVTTPGTDGLGTLRQGYLEDSSVDAVREVTELIEAQ 237

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y  N + I  +  M+     +
Sbjct: 238 RGYELNAKVITAADQMLGAATQI 260



 Score = 43.3 bits (100), Expect = 0.010,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 23/41 (56%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          + +  IA +G++ Q  R+++IS N+AN  TTG       + 
Sbjct: 1  MRALKIAATGMSAQQMRVEVISNNLANMSTTGYNTRRAEFA 41


>gi|327478811|gb|AEA82121.1| flagellar basal-body rod protein FlgG [Pseudomonas stutzeri DSM
           4166]
          Length = 261

 Score = 52.2 bits (123), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 12/82 (14%), Positives = 23/82 (28%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +    +   GG   ++                      G+++  NV V+     M    
Sbjct: 178 FTNPGGLEALGGNLYRETVASGEPVEGVPGEEGLGQLKQGVLEGSNVQVVEAMVAMIAIQ 237

Query: 109 RLYMANLQTIKQSHDMMTTTLD 130
           R Y AN + +  +  M      
Sbjct: 238 RAYEANAKVLDAASGMQQFLNQ 259



 Score = 41.4 bits (95), Expect = 0.045,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 20/41 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          + ++  ++ +GLA Q   M  ++ N+AN  T G       +
Sbjct: 1  MNSALWVSKTGLAAQDKAMATVANNLANVNTNGFKSDRAVF 41


>gi|323697455|ref|ZP_08109367.1| protein of unknown function DUF1078 domain protein [Desulfovibrio
           sp. ND132]
 gi|323457387|gb|EGB13252.1| protein of unknown function DUF1078 domain protein [Desulfovibrio
           desulfuricans ND132]
          Length = 108

 Score = 52.2 bits (123), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/123 (25%), Positives = 44/123 (35%), Gaps = 19/123 (15%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
               S L+  S   ++ + NIAN  T G   G+           E   G  GV V  I  
Sbjct: 3   DANVSALSALSTVQEVSANNIANMNTDGFRAGA--------VSLESGPGGQGVEVASITE 54

Query: 69  DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
             +                  V+  N +V  E  DM  T+R + AN   I+ S +M    
Sbjct: 55  STAPGAFING-----------VETSNTDVGREMVDMIVTSRAFEANTTFIRASEEMTGHL 103

Query: 129 LDL 131
           LD+
Sbjct: 104 LDM 106


>gi|148266214|ref|YP_001232920.1| hypothetical protein Gura_4204 [Geobacter uraniireducens Rf4]
 gi|146399714|gb|ABQ28347.1| protein of unknown function DUF1078 domain protein [Geobacter
           uraniireducens Rf4]
          Length = 294

 Score = 52.2 bits (123), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 14/44 (31%), Positives = 22/44 (50%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  NV++  +   M  T R Y AN +TI  + +M    L L R
Sbjct: 251 LEQSNVDMASQFVKMIITQRAYSANSKTITTADEMTQEILSLKR 294


>gi|332162901|ref|YP_004299478.1| Lateral flagellar hook protein [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|325667131|gb|ADZ43775.1| Lateral flagellar hook protein [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|330863351|emb|CBX73474.1| flagellar hook protein flgE [Yersinia enterocolitica W22703]
          Length = 397

 Score = 52.2 bits (123), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 14/84 (16%), Positives = 27/84 (32%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +    +    G          +  +     G      +G ++  NV++  E   +    
Sbjct: 314 FANPNGLATQNGTTWSVTSRSGAPLLGSPGTGLLGNIVAGALEASNVDLTAELVGLMTAQ 373

Query: 109 RLYMANLQTIKQSHDMMTTTLDLL 132
           R Y AN + I  +  MM     +L
Sbjct: 374 RNYQANTKIISTNDSMMNALFQVL 397



 Score = 40.6 bits (93), Expect = 0.072,   Method: Composition-based stats.
 Identities = 21/84 (25%), Positives = 33/84 (39%), Gaps = 1/84 (1%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          S  IAN+GL+  + ++  IS NIAN+ T G   G   +       + +  G  G   + I
Sbjct: 2  SFSIANTGLSAVTEQLNTISNNIANSGTKGFKSGRTEFASMYAQSQPLGVGVSGTS-QSI 60

Query: 67 GVDQSTFVEEFDPGHPVANASGIV 90
            D S           ++     V
Sbjct: 61 KKDGSIDRTGNAMDLAISGNGFFV 84


>gi|223039214|ref|ZP_03609504.1| flagellar hook protein [Campylobacter rectus RM3267]
 gi|222879575|gb|EEF14666.1| flagellar hook protein [Campylobacter rectus RM3267]
          Length = 543

 Score = 52.2 bits (123), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 25/44 (56%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  NV++     ++  T + Y AN ++I  S++M+   ++L R
Sbjct: 500 LEQSNVDLAQALTEIIVTQKAYDANAKSITTSNEMLQRAIELKR 543


>gi|190574263|ref|YP_001972108.1| flagellar hook protein FlgE [Stenotrophomonas maltophilia K279a]
 gi|190012185|emb|CAQ45808.1| putative flagellar hook protein [Stenotrophomonas maltophilia
           K279a]
          Length = 407

 Score = 52.2 bits (123), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 10/61 (16%), Positives = 24/61 (39%)

Query: 71  STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           +      D  +     +G ++   V++  +  +M    R + AN Q I     +  T ++
Sbjct: 346 TPRTGMPDTSNLGKIQAGSLEASTVDLTEQLVNMITAQRNFQANAQMITTQDQITQTVIN 405

Query: 131 L 131
           +
Sbjct: 406 I 406



 Score = 34.1 bits (76), Expect = 7.0,   Method: Composition-based stats.
 Identities = 9/82 (10%), Positives = 28/82 (34%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
            +++ SG+   ++ + + + N+AN  TTG       +     +    +  +      ++
Sbjct: 2  GFNVSLSGINAANSDLSVTANNVANVNTTGFKESRAEFADLFSATGYGLSKNAVGSGVRV 61

Query: 67 GVDQSTFVEEFDPGHPVANASG 88
                F +  +     +    
Sbjct: 62 SNVAQQFKQGHNEQTGRSLDMA 83


>gi|209547530|ref|YP_002279448.1| flagellar hook protein FlgE [Rhizobium leguminosarum bv. trifolii
           WSM2304]
 gi|209538774|gb|ACI58708.1| protein of unknown function DUF1078 domain protein [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 430

 Score = 52.2 bits (123), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 46/124 (37%), Gaps = 5/124 (4%)

Query: 11  ANSGLAVQSARMQ-IISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVD 69
           A S ++  S     ++S + AN  T             T++  + +    G      G  
Sbjct: 311 AASAVSSVSIGTDGVVSVSYANGATKALYQ----IPLATVASPDNLTLLSGNVYSANGQS 366

Query: 70  QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
             T           +  SG ++  NV++  E  +M E  R Y AN +  +   D+M   +
Sbjct: 367 GVTVTGFPQTNGLGSIQSGALESSNVDLAGELTEMIEAQRSYTANSKVFQTGSDIMDVLV 426

Query: 130 DLLR 133
           +L R
Sbjct: 427 NLKR 430



 Score = 47.9 bits (112), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 30/64 (46%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            +  S   A SG++ Q+ R+  +S+NIANA T G    S  +    +      + SGGV
Sbjct: 1  MSIFGSMKTAVSGMSAQANRLSTVSDNIANANTVGYKAVSTSFSSLVLPSSSGNYNSGGV 60

Query: 62 RVKK 65
          +   
Sbjct: 61 QTSV 64


>gi|121534935|ref|ZP_01666754.1| protein of unknown function DUF1078 domain protein [Thermosinus
           carboxydivorans Nor1]
 gi|121306534|gb|EAX47457.1| protein of unknown function DUF1078 domain protein [Thermosinus
           carboxydivorans Nor1]
          Length = 247

 Score = 52.2 bits (123), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 16/99 (16%), Positives = 34/99 (34%)

Query: 32  ARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVK 91
           A+ T D  G        +   +V+       + K G                    G+++
Sbjct: 144 AKVTIDADGRVFVDEVEVDRLQVVDFPDQRALVKEGDSLFAAPGAAPQAGSGQVRQGVLE 203

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             NVNV+ E  ++    R Y  N + ++    ++   ++
Sbjct: 204 LANVNVVAEMVNLIAGYRAYEINAKMVQTHDQLLDKAVN 242


>gi|88858141|ref|ZP_01132783.1| flagellar biosynthesis; cell-distal portion of basal-body rod
           [Pseudoalteromonas tunicata D2]
 gi|88819758|gb|EAR29571.1| flagellar biosynthesis; cell-distal portion of basal-body rod
           [Pseudoalteromonas tunicata D2]
          Length = 262

 Score = 52.2 bits (123), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 14/78 (17%), Positives = 24/78 (30%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +   G     +  V  +                G ++  NVN   E  ++ ET 
Sbjct: 179 FINPSGLEPMGQNLFTETAVSGAPIQGNPGADGLGVIVQGALETSNVNTTEELVNLIETQ 238

Query: 109 RLYMANLQTIKQSHDMMT 126
           R+Y  N + I     M+ 
Sbjct: 239 RIYEMNSKVISSVDQMLN 256



 Score = 40.2 bits (92), Expect = 0.086,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  +  I+ +GL  Q   + +IS N+ANA T G       +
Sbjct: 1  MHPALWISKTGLDAQQTDISVISNNLANASTVGYKKSRAVF 41


>gi|183598617|ref|ZP_02960110.1| hypothetical protein PROSTU_02017 [Providencia stuartii ATCC 25827]
 gi|188020796|gb|EDU58836.1| hypothetical protein PROSTU_02017 [Providencia stuartii ATCC 25827]
          Length = 406

 Score = 52.2 bits (123), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 31/83 (37%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +    +   GG          +        G      SG ++  NV++  E  +M    
Sbjct: 323 FANPNGLVSQGGNVWAPSNASGNPMDGVPGVGQFGKLTSGALESSNVDMSQELINMIVMQ 382

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y +N QTIK    M+ T ++L
Sbjct: 383 RNYQSNAQTIKTQDQMLQTMVNL 405


>gi|270262401|ref|ZP_06190672.1| flagellar hook protein FlgE [Serratia odorifera 4Rx13]
 gi|270043085|gb|EFA16178.1| flagellar hook protein FlgE [Serratia odorifera 4Rx13]
          Length = 410

 Score = 52.2 bits (123), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/83 (25%), Positives = 33/83 (39%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            S  E +   G    ++ G      V     G      SG ++  NV++  E  +M    
Sbjct: 327 FSNPEGLSSQGDNVWQETGASGQPRVGLAGSGGFGKLTSGALEASNVDLSQELVNMIVAQ 386

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y +N QTIK    ++ T + L
Sbjct: 387 RNYQSNAQTIKTQDSILQTLVSL 409



 Score = 35.6 bits (80), Expect = 2.5,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 20/39 (51%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          +   A SGL   +  + +I  NIAN+ T+G   G+  + 
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATSGFKSGTVSFA 40


>gi|52841453|ref|YP_095252.1| flagellar basal body rod protein FlgG [Legionella pneumophila
           subsp. pneumophila str. Philadelphia 1]
 gi|52628564|gb|AAU27305.1| flagellar basal body rod protein FlgG [Legionella pneumophila
           subsp. pneumophila str. Philadelphia 1]
          Length = 261

 Score = 52.2 bits (123), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 12/86 (13%), Positives = 26/86 (30%)

Query: 45  RRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
           +         +   G     +     +   +            G ++  NVNV+ E  +M
Sbjct: 174 QLTDFINPAGLQPIGQNLYTETVASGTPITDNPGNSGLGTLLQGSLEASNVNVVEELVNM 233

Query: 105 RETNRLYMANLQTIKQSHDMMTTTLD 130
            +  R Y    ++I+    M+     
Sbjct: 234 IQAQRSYEITAKSIQTVDSMLQYLTQ 259



 Score = 39.1 bits (89), Expect = 0.18,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 18/39 (46%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSD 42
          +  +  ++ SGL  Q   +  I+ N+AN  TT    G  
Sbjct: 1  MEPALWVSKSGLEAQDKNIATIANNLANVNTTAFKKGRA 39


>gi|15612112|ref|NP_223764.1| flagellar hook-associated protein FlgK [Helicobacter pylori J99]
 gi|4155652|gb|AAD06640.1| FLAGELLAR HOOK-ASSOCIATED PROTEIN 1 (HAP1) [Helicobacter pylori
           J99]
          Length = 606

 Score = 52.2 bits (123), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/122 (17%), Positives = 37/122 (30%), Gaps = 4/122 (3%)

Query: 16  AVQSARMQIISEN--IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVD--QS 71
                 +  I+ N  +AN          D Y  K       +         KI  D  +S
Sbjct: 485 TAIRPWLAPINGNFDVANMMQQLQYDSVDFYNDKFDIKPMKISEFYQFLTGKINTDAEKS 544

Query: 72  TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             + +             +    V+V  E  ++ +    Y AN + I     M+ T L +
Sbjct: 545 GRILDTKQSMLETIKKEQLSISQVSVDEEMVNLIKFQSGYAANAKVITAIDRMIDTLLGI 604

Query: 132 LR 133
            +
Sbjct: 605 KQ 606



 Score = 44.5 bits (103), Expect = 0.005,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 40/111 (36%), Gaps = 9/111 (8%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M  +++S + + +GL    + + +   NI+NA         + Y R+ +  +       G
Sbjct: 1   MGGILSSLNTSYTGLQAHQSMVDVTGNNISNASD-------EFYSRQRVIAKPQAAYMYG 53

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
            +   +GVD        D            +  N     E + ++E +  +
Sbjct: 54  TKNVNMGVDVEAIERVHDEFVFARYTKANYE--NTYYDTEFSHLKEASAYF 102


>gi|254478136|ref|ZP_05091519.1| conserved domain protein [Carboxydibrachium pacificum DSM 12653]
 gi|214035998|gb|EEB76689.1| conserved domain protein [Carboxydibrachium pacificum DSM 12653]
          Length = 251

 Score = 52.2 bits (123), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 20/45 (44%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             G ++  NVN + E  +M    R Y +N + +    + +   ++
Sbjct: 202 KQGFLEGSNVNSVKEMVNMISVMRNYESNQKVVTAFDETLGKAVN 246



 Score = 41.8 bits (96), Expect = 0.029,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 25/67 (37%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I   + A SG+  Q+  M +++ N+AN  T G                    G      
Sbjct: 1  MIRGLYTAASGMLAQTKVMDVLANNLANVNTVGYKKDVVVLSSFPNFETIREGGDNVPPD 60

Query: 64 KKIGVDQ 70
          +K+G  +
Sbjct: 61 RKVGRIE 67


>gi|302343058|ref|YP_003807587.1| fagellar hook-basal body protein [Desulfarculus baarsii DSM 2075]
 gi|301639671|gb|ADK84993.1| fagellar hook-basal body protein [Desulfarculus baarsii DSM 2075]
          Length = 452

 Score = 52.2 bits (123), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 10/49 (20%), Positives = 23/49 (46%)

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           A     ++   V+   E  +M    R + A+ +T+  S +M+ T +++ 
Sbjct: 403 AIEDQSLETSTVDTATEMMNMIIYQRAFQASSKTVTTSDEMIKTAINMK 451


>gi|187932866|ref|YP_001885049.1| flagellar hook protein FlgE [Clostridium botulinum B str. Eklund
           17B]
 gi|187721019|gb|ACD22240.1| flagellar hook protein FlgE [Clostridium botulinum B str. Eklund
           17B]
          Length = 366

 Score = 52.2 bits (123), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 23/47 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NV++  +  DM    R + A+ + I    +++ T   L+R
Sbjct: 320 QGALESSNVDLTEQFTDMITATRAFQASSKMITTGDEILQTITGLMR 366



 Score = 36.8 bits (83), Expect = 1.1,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          ++ S +   SG+     ++ +I  NIAN  TTG    S  +
Sbjct: 1  MLRSMYSGISGMKTNQVKLDVIGNNIANVSTTGFKSSSARF 41


>gi|90418365|ref|ZP_01226277.1| putative flagellar hook protein FlgE [Aurantimonas manganoxydans
           SI85-9A1]
 gi|90338037|gb|EAS51688.1| putative flagellar hook protein FlgE [Aurantimonas manganoxydans
           SI85-9A1]
          Length = 388

 Score = 52.2 bits (123), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 14/86 (16%), Positives = 31/86 (36%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
             +  + +  S G             +         +  S  ++  NV++  E   M E+
Sbjct: 303 RFASPDQLQASAGNVYSATASSGVAALGGPGTNGYGSLVSSGLEQSNVDLASELTSMIES 362

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y AN +  +   +++   ++L R
Sbjct: 363 QRSYSANSKVFQTGAEILDVLVNLKR 388



 Score = 42.9 bits (99), Expect = 0.014,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 28/64 (43%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            +      + SG+  Q+ R+  +SENIAN+ T G    S  +    ++     +  G V
Sbjct: 1  MSINGVFRTSVSGMNAQANRLSTVSENIANSSTNGYKRNSTEFASLVLAQGGGEYNPGSV 60

Query: 62 RVKK 65
          + + 
Sbjct: 61 KTQV 64


>gi|54294165|ref|YP_126580.1| flagellar basal body rod protein FlgG [Legionella pneumophila str.
           Lens]
 gi|54297184|ref|YP_123553.1| flagellar basal body rod protein FlgG [Legionella pneumophila str.
           Paris]
 gi|148358808|ref|YP_001250015.1| flagellar basal body rod protein FlgG [Legionella pneumophila str.
           Corby]
 gi|296106853|ref|YP_003618553.1| flagellar basal-body rod protein FlgG [Legionella pneumophila
           2300/99 Alcoy]
 gi|53750969|emb|CAH12380.1| flagellar biosynthesis protein FlgG [Legionella pneumophila str.
           Paris]
 gi|53753997|emb|CAH15468.1| flagellar biosynthesis protein FlgG [Legionella pneumophila str.
           Lens]
 gi|148280581|gb|ABQ54669.1| flagellar basal body rod protein FlgG [Legionella pneumophila str.
           Corby]
 gi|295648754|gb|ADG24601.1| flagellar basal-body rod protein FlgG [Legionella pneumophila
           2300/99 Alcoy]
 gi|307609979|emb|CBW99508.1| flagellar biosynthesis protein FlgG [Legionella pneumophila 130b]
          Length = 261

 Score = 52.2 bits (123), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 12/82 (14%), Positives = 26/82 (31%)

Query: 45  RRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
           +         +   G     +     +   +            G ++  NVNV+ E  +M
Sbjct: 174 QLTDFINPAGLQPIGQNLYTETVASGTPITDNPGNSGLGTLLQGSLEASNVNVVEELVNM 233

Query: 105 RETNRLYMANLQTIKQSHDMMT 126
            +  R Y    ++I+    M+ 
Sbjct: 234 IQAQRSYEITAKSIQTVDSMLQ 255



 Score = 39.1 bits (89), Expect = 0.19,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 18/39 (46%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSD 42
          +  +  ++ SGL  Q   +  I+ N+AN  TT    G  
Sbjct: 1  MEPALWVSKSGLEAQDKNIATIANNLANVNTTAFKKGRA 39


>gi|194365680|ref|YP_002028290.1| flagellar hook protein FlgE [Stenotrophomonas maltophilia R551-3]
 gi|194348484|gb|ACF51607.1| flagellar basal body FlaE domain protein [Stenotrophomonas
           maltophilia R551-3]
          Length = 407

 Score = 52.2 bits (123), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 10/61 (16%), Positives = 24/61 (39%)

Query: 71  STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           +      D  +     +G ++   V++  +  +M    R + AN Q I     +  T ++
Sbjct: 346 TPRTGMPDTSNLGKIQAGSLEASTVDLTEQLVNMITAQRNFQANAQMITTQDQITQTVIN 405

Query: 131 L 131
           +
Sbjct: 406 I 406



 Score = 34.1 bits (76), Expect = 7.5,   Method: Composition-based stats.
 Identities = 9/82 (10%), Positives = 28/82 (34%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
            +++ SG+   ++ + + + N+AN  TTG       +     +    +  +      ++
Sbjct: 2  GFNVSLSGINAANSDLSVTANNVANVNTTGFKESRAEFADLFSATGYGLSKNAVGSGVRV 61

Query: 67 GVDQSTFVEEFDPGHPVANASG 88
                F +  +     +    
Sbjct: 62 SNVAQQFKQGHNEQTGRSLDMA 83


>gi|296447438|ref|ZP_06889363.1| flagellar basal-body rod protein FlgG [Methylosinus trichosporium
           OB3b]
 gi|296255058|gb|EFH02160.1| flagellar basal-body rod protein FlgG [Methylosinus trichosporium
           OB3b]
          Length = 262

 Score = 52.2 bits (123), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 22/130 (16%), Positives = 40/130 (30%), Gaps = 30/130 (23%)

Query: 7   SAHIANSGL---------AVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG 57
           S  ++ SGL           Q      I+ N AN        G+   +          + 
Sbjct: 148 SVSVSQSGLVTAVIGGQTNPQQLGQLTIA-NFANESGLEALGGNLFRQ----------NQ 196

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           + G  V  +  D    V           +   ++  NV+ + E  ++    R +  N + 
Sbjct: 197 ASGTPVVGVPGDPGYGVI----------SQYYLESSNVDSVKELVNLIAAQRAFELNSKV 246

Query: 118 IKQSHDMMTT 127
           I    +M  T
Sbjct: 247 ISAVDEMAGT 256



 Score = 43.3 bits (100), Expect = 0.012,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 25/64 (39%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          + +  IA +G+  Q   +++IS NIAN  TT        +       + +   S   R  
Sbjct: 1  MRALAIAATGMNAQQQNIEVISNNIANINTTAFKRSRAEFTDLLYQADRLQGVSNRGRDA 60

Query: 65 KIGV 68
           +  
Sbjct: 61 TVPE 64


>gi|291276324|ref|YP_003516096.1| flagellar hook subunit protein [Helicobacter mustelae 12198]
 gi|290963518|emb|CBG39349.1| flagellar hook subunit protein [Helicobacter mustelae 12198]
          Length = 705

 Score = 52.2 bits (123), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 13/85 (15%), Positives = 29/85 (34%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +    +   GG      G      +   + G   +     ++  NV++      +    
Sbjct: 621 FANNTGLQAIGGNVFSTSGNSGDPIIGAANTGRRGSVNGSKLEMSNVDLSRSLTQLIVVQ 680

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R + AN + +  S  ++ T L L +
Sbjct: 681 RGFQANSKAVTTSDQILNTLLSLKQ 705


>gi|209695760|ref|YP_002263690.1| flagellar basal body rod protein FlgG [Aliivibrio salmonicida
           LFI1238]
 gi|208009713|emb|CAQ80017.1| flagellar basal-body rod protein FlgG (distal rod protein)
           [Aliivibrio salmonicida LFI1238]
          Length = 262

 Score = 52.2 bits (123), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 23/72 (31%)

Query: 55  MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
           +   G       G                A    +++  NVNV  E  +M E  R+Y  N
Sbjct: 185 LEPVGQNLYLPTGASGDPQEGTPGLEGLGAIRQSMLEASNVNVTEELVNMIEAQRVYEMN 244

Query: 115 LQTIKQSHDMMT 126
            + I     M +
Sbjct: 245 SKVISAVDKMAS 256



 Score = 38.7 bits (88), Expect = 0.27,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 19/41 (46%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  +  ++ +GL  Q   +  IS N+ANA T G       +
Sbjct: 1  MNPALWVSKTGLDAQQTNIATISNNLANASTVGFKKSRAVF 41


>gi|203288202|ref|YP_002223217.1| flagellar hook-basal body complex protein [Borrelia recurrentis A1]
 gi|201085422|gb|ACH94996.1| flagellar hook-basal body complex protein [Borrelia recurrentis A1]
          Length = 291

 Score = 52.2 bits (123), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 24/45 (53%), Gaps = 1/45 (2%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD-LLR 133
           ++  NVN + E   M   NR+Y AN +TI+    ++   ++ + +
Sbjct: 246 LECSNVNAINEMVSMITVNRVYEANQKTIQTEDTLLGKLINEIGK 290



 Score = 48.3 bits (113), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 30/72 (41%)

Query: 3  YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
          Y++   + A SG+  Q  R+++I+ N+AN   TG        +          +  G  +
Sbjct: 9  YMVRGIYTAASGMIAQRHRLEVIANNLANIDLTGYKKDLSVQKAFPEMLIRRTNDDGLYK 68

Query: 63 VKKIGVDQSTFV 74
            K  ++ +  V
Sbjct: 69 FPKGYLETAPVV 80


>gi|148554187|ref|YP_001261769.1| flagellar basal body rod protein FlgG [Sphingomonas wittichii RW1]
 gi|148499377|gb|ABQ67631.1| flagellar basal-body rod protein FlgG [Sphingomonas wittichii RW1]
          Length = 262

 Score = 52.2 bits (123), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 16/97 (16%), Positives = 27/97 (27%)

Query: 30  ANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGI 89
           A       +           S    +   G   + +                        
Sbjct: 160 ATQAGETTSTELGKIELARFSNPAGLQAEGNNILTETPASGQPQTGPGGIDGRGTIQQSS 219

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           ++  NVN++ E  DM ET R Y  N + I  +  M+ 
Sbjct: 220 LESSNVNIVEELVDMIETQRAYEVNSKMISSTDQMLQ 256



 Score = 40.6 bits (93), Expect = 0.073,   Method: Composition-based stats.
 Identities = 17/59 (28%), Positives = 26/59 (44%)

Query: 6  ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          A+ H+A +GL  Q+ RMQ+I+ N+AN  TTG       +             +     K
Sbjct: 4  AALHVARTGLDAQNMRMQVIANNLANVNTTGFKRDRASFETLAYQAMTAPGAASSDSTK 62


>gi|126176156|ref|YP_001052305.1| flagellar hook protein FlgE [Shewanella baltica OS155]
 gi|304412508|ref|ZP_07394114.1| fagellar hook-basal body protein [Shewanella baltica OS183]
 gi|307307167|ref|ZP_07586905.1| fagellar hook-basal body protein [Shewanella baltica BA175]
 gi|125999361|gb|ABN63436.1| flagellar basal body FlaE domain protein [Shewanella baltica OS155]
 gi|304349150|gb|EFM13562.1| fagellar hook-basal body protein [Shewanella baltica OS183]
 gi|306910406|gb|EFN40837.1| fagellar hook-basal body protein [Shewanella baltica BA175]
          Length = 395

 Score = 52.2 bits (123), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 18/42 (42%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            ++  NV+   E  ++    R Y +N + +  +  M    L+
Sbjct: 352 YLEGSNVDTTAEMVNLMSAQRNYQSNAKVLDVNSTMQQALLN 393



 Score = 41.0 bits (94), Expect = 0.054,   Method: Composition-based stats.
 Identities = 16/39 (41%), Positives = 21/39 (53%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          S +IA SGL   +  +  IS NIANA T+G   G   + 
Sbjct: 2  SFNIALSGLQATTQDLNTISNNIANASTSGFRGGRSEFA 40


>gi|313141887|ref|ZP_07804080.1| flagellar hook protein FlgE [Helicobacter canadensis MIT 98-5491]
 gi|313130918|gb|EFR48535.1| flagellar hook protein FlgE [Helicobacter canadensis MIT 98-5491]
          Length = 708

 Score = 52.2 bits (123), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 20/46 (43%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
           +++  NV+      D+    R Y  + ++I  +  +M   + L R 
Sbjct: 663 MLETSNVDTGTALTDLIVYQRGYQMSAKSITTADQLMQEAIQLKRS 708


>gi|296134368|ref|YP_003641615.1| flagellar basal-body rod protein FlgF [Thermincola sp. JR]
 gi|296032946|gb|ADG83714.1| flagellar basal-body rod protein FlgF [Thermincola potens JR]
          Length = 251

 Score = 52.2 bits (123), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 19/41 (46%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           ++  NVN + E  D+    R Y AN + I+     +   ++
Sbjct: 205 LETSNVNPVQEMVDLITIMRAYEANQKMIQAHDQTLGQAIN 245



 Score = 38.3 bits (87), Expect = 0.33,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 25/55 (45%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +I   + + +G+  +SAR  + + N+AN  TTG    +  ++       + M   
Sbjct: 1  MIRGLYTSAAGMLAESARNDVAANNLANVNTTGYKKDAAVFKSFPEMLIQRMEKP 55


>gi|253827676|ref|ZP_04870561.1| flagellar hook protein [Helicobacter canadensis MIT 98-5491]
 gi|253511082|gb|EES89741.1| flagellar hook protein [Helicobacter canadensis MIT 98-5491]
          Length = 765

 Score = 52.2 bits (123), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 20/46 (43%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
           +++  NV+      D+    R Y  + ++I  +  +M   + L R 
Sbjct: 720 MLETSNVDTGTALTDLIVYQRGYQMSAKSITTADQLMQEAIQLKRS 765


>gi|42528268|ref|NP_973366.1| flagellar hook protein FlgE [Treponema denticola ATCC 35405]
 gi|4426943|gb|AAD20617.1| flagellar hook protein FlgE [Treponema denticola]
 gi|41819538|gb|AAS13285.1| flagellar hook protein FlgE [Treponema denticola ATCC 35405]
          Length = 463

 Score = 52.2 bits (123), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 14/44 (31%), Positives = 25/44 (56%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  NV++  +  DM  T + + A  +TI+ S  M+ T L+L R
Sbjct: 420 LEMSNVDLTDQFVDMIVTQKGFQAGAKTIQTSDTMLETVLNLKR 463



 Score = 39.1 bits (89), Expect = 0.18,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 20/42 (47%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S     +G+     RM +I  N+AN  TTG   G   ++
Sbjct: 1  MMRSLFSGVTGMQNHQTRMDVIGNNVANVNTTGFKRGRVNFQ 42


>gi|85710166|ref|ZP_01041231.1| flagellar basal-body rod protein [Erythrobacter sp. NAP1]
 gi|85688876|gb|EAQ28880.1| flagellar basal-body rod protein [Erythrobacter sp. NAP1]
          Length = 263

 Score = 52.2 bits (123), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 21/45 (46%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             G+++  NVNV+ E  +M E  R Y  N + +    +M+     
Sbjct: 217 RQGMLETSNVNVVEELVEMIEAQRAYEINSKMVSSVDEMLRNANQ 261



 Score = 42.2 bits (97), Expect = 0.027,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 26/60 (43%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           ++ H+A +GL  Q ARM++I+ N+AN  TTG       +         V       +  
Sbjct: 3  TSALHVARTGLEAQDARMRVIANNLANIGTTGFKRDRAEFATLAYQEMRVAGQQSTQQTA 62


>gi|325474542|gb|EGC77728.1| flagellar hook protein FlgE [Treponema denticola F0402]
          Length = 463

 Score = 52.2 bits (123), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 14/44 (31%), Positives = 25/44 (56%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  NV++  +  DM  T + + A  +TI+ S  M+ T L+L R
Sbjct: 420 LEMSNVDLTDQFVDMIVTQKGFQAGAKTIQTSDTMLETVLNLKR 463



 Score = 39.1 bits (89), Expect = 0.19,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 20/42 (47%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S     +G+     RM +I  N+AN  TTG   G   ++
Sbjct: 1  MMRSLFSGVTGMQNHQTRMDVIGNNVANVNTTGFKRGRVNFQ 42


>gi|86360902|ref|YP_472789.1| flagellar hook protein FlgE [Rhizobium etli CFN 42]
 gi|86285004|gb|ABC94062.1| flagellar hook protein [Rhizobium etli CFN 42]
          Length = 430

 Score = 52.2 bits (123), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 48/124 (38%), Gaps = 5/124 (4%)

Query: 11  ANSGLAVQSARMQ-IISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVD 69
           A S ++  S     ++S + AN    G T         T++  + +    G      G+ 
Sbjct: 311 AASAVSSVSIGTDGVVSVSYAN----GTTKSLYQIPLATVASPDNLTLLSGNVYTANGMS 366

Query: 70  QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
             T           +  SG ++  NV++  E  +M E  R Y AN +  +   D+M   +
Sbjct: 367 GVTVTGFPQTNGLGSIQSGALESSNVDLAGELTEMIEAQRSYTANSKVFQTGSDIMDVLV 426

Query: 130 DLLR 133
           +L R
Sbjct: 427 NLKR 430



 Score = 47.6 bits (111), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 30/64 (46%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            +  S   A SG++ Q+ R+  +S+NIANA T G    S  +    +      + SGGV
Sbjct: 1  MSIFGSMKTAVSGMSAQANRLSTVSDNIANANTVGYKAVSTSFSSLVLPSSSGNYNSGGV 60

Query: 62 RVKK 65
          +   
Sbjct: 61 QTSV 64


>gi|71906391|ref|YP_283978.1| flagellar hook protein FlgE [Dechloromonas aromatica RCB]
 gi|71846012|gb|AAZ45508.1| Flagellar basal body rod protein:Protein of unknown function
           DUF1078:Flagellar basal body FlaE [Dechloromonas
           aromatica RCB]
          Length = 442

 Score = 52.2 bits (123), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 39/110 (35%), Gaps = 2/110 (1%)

Query: 24  IISEN--IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGH 81
            I +N  I    + G T                +   G     +      + +   + G 
Sbjct: 332 TIGDNGVIQGVYSNGQTRNMAQIVLANFQNPNGLMSIGNNDYIETADSGQSMIGTPNTGT 391

Query: 82  PVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
                SG V+  NV++  E  +M    R Y AN Q+IK    +M T +++
Sbjct: 392 FGVLQSGAVEDSNVDLTAELVNMIVQQRNYQANAQSIKTQDQIMQTLVNI 441


>gi|238793998|ref|ZP_04637616.1| Flagellar hook protein FlgE [Yersinia intermedia ATCC 29909]
 gi|238726630|gb|EEQ18166.1| Flagellar hook protein FlgE [Yersinia intermedia ATCC 29909]
          Length = 425

 Score = 52.2 bits (123), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 34/83 (40%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            S  E +   G    K+     +  +     G      SG ++  NV++  E  +M    
Sbjct: 342 FSNPEGLSPEGDNVWKETKSSGNPILGTAGGGGFGTLTSGALESSNVDLSKELVNMIVAQ 401

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y +N QTIK    ++ T ++L
Sbjct: 402 RNYQSNAQTIKTQDQILQTLVNL 424



 Score = 36.0 bits (81), Expect = 1.9,   Method: Composition-based stats.
 Identities = 19/63 (30%), Positives = 26/63 (41%), Gaps = 4/63 (6%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
              A SGL   S+ + +I  NIAN+ T+G   GS  +               GV+V  I
Sbjct: 2  GFSQAVSGLNAASSNLDVIGNNIANSATSGFKAGSVSFA----DMFAGSQTGMGVKVAGI 57

Query: 67 GVD 69
            D
Sbjct: 58 TQD 60


>gi|332704817|ref|ZP_08424905.1| flagellar hook-associated protein FlgK [Desulfovibrio africanus
           str. Walvis Bay]
 gi|332554966|gb|EGJ52010.1| flagellar hook-associated protein FlgK [Desulfovibrio africanus
           str. Walvis Bay]
          Length = 725

 Score = 52.2 bits (123), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 20/112 (17%), Positives = 41/112 (36%), Gaps = 6/112 (5%)

Query: 23  QIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHP 82
            +I+ +IA  +       +D       +  + +       V  +G D S+    F   + 
Sbjct: 617 NLIASDIAALKDKKLDIHTDFGG----TAHQTLSEFYNALVSSVGGDTSSAQFNFSYQNS 672

Query: 83  VANASGIVK--YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +A      +     VN+  E +++ +    Y A  + I  +  M+ T L L 
Sbjct: 673 LAQDLDAQQQSLSGVNLDEEMSNLIKFQHSYTAAAKLISTADQMLQTLLGLK 724



 Score = 36.0 bits (81), Expect = 1.8,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 18/38 (47%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDT 38
          M  +     IA  GL    A +++  +NI+N  T G +
Sbjct: 1  MSGINNIMDIARKGLFASQAAIEVTGQNISNVNTVGYS 38


>gi|302037635|ref|YP_003797957.1| first flagellar hook-filament junction protein FlgK [Candidatus
           Nitrospira defluvii]
 gi|300605699|emb|CBK42032.1| First flagellar hook-filament junction protein FlgK [Candidatus
           Nitrospira defluvii]
          Length = 464

 Score = 52.2 bits (123), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 22/140 (15%), Positives = 44/140 (31%), Gaps = 10/140 (7%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISE--------NIANARTTGDTPGSDPYRRKTISFEE 53
           D+  AS   A +     + R +I +         N  NA    +   +        +F+ 
Sbjct: 327 DFFTASGTTAGTISMALTDRQKIAASSTAAGVPGNNVNALALSNLQTASVAGLGNTTFQG 386

Query: 54  VMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
                 G     +         +      +       +   V++  E  ++ +  R + A
Sbjct: 387 YYSAMAGSFGGTLQGATRDLQGQEILHDQLLAHRA--EVSGVSMDEELINLLKYQRAFEA 444

Query: 114 NLQTIKQSHDMMTTTLDLLR 133
             + I  S +M+ T L L R
Sbjct: 445 ASKLITTSDEMLQTILTLKR 464



 Score = 34.5 bits (77), Expect = 4.6,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 27/77 (35%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  L     I ++ LA     + +  +NIAN  T G +              +      G
Sbjct: 1  MSGLNGLFGIGSNALATFQRALSVTGQNIANVSTPGYSRQEITLSESLPENGQPGQIGTG 60

Query: 61 VRVKKIGVDQSTFVEEF 77
          V   +I     +FVE+ 
Sbjct: 61 VTATEIRRSVDSFVEQQ 77


>gi|206562843|ref|YP_002233606.1| flagellar hook protein FlgE [Burkholderia cenocepacia J2315]
 gi|198038883|emb|CAR54845.1| flagellar hook protein 2 FlgE2 [Burkholderia cenocepacia J2315]
          Length = 414

 Score = 52.2 bits (123), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 17/83 (20%), Positives = 30/83 (36%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +    +   GG +  +        +      +        ++  NVN+  E  ++    
Sbjct: 331 FNNPNGLVNIGGNQYAETAASGVPQIAAPGSTNHGTLQGSALENSNVNLTTELVNLITAQ 390

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y AN QTIK    +  T L+L
Sbjct: 391 RNYQANAQTIKTQQAVDQTLLNL 413


>gi|283850813|ref|ZP_06368099.1| flagellar hook-associated protein FlgK [Desulfovibrio sp. FW1012B]
 gi|283573736|gb|EFC21710.1| flagellar hook-associated protein FlgK [Desulfovibrio sp. FW1012B]
          Length = 709

 Score = 52.2 bits (123), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 22/126 (17%), Positives = 39/126 (30%), Gaps = 8/126 (6%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
           H+   GL          ++ +A             Y        + +       V KIG 
Sbjct: 589 HVGADGLLASG--DNTTAKALAALEDK----DISFYVTGQAPVSQTLGEYYSGLVGKIGS 642

Query: 69  DQSTFVEEFDPGHPVANA--SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           D +    +      +A    +  +    VN+  E  +M +    Y A  + I  +  +M 
Sbjct: 643 DTANASYQASYQSTLAAQLDAAQLSASGVNLDEELTNMIKFQHSYQAAAKLISTADQLME 702

Query: 127 TTLDLL 132
           T L L 
Sbjct: 703 TVLGLK 708



 Score = 39.9 bits (91), Expect = 0.11,   Method: Composition-based stats.
 Identities = 21/121 (17%), Positives = 40/121 (33%), Gaps = 8/121 (6%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M  L +   I  S L+   A +Q+   NIAN  T G +  +   +  +           G
Sbjct: 1   MSSLSSLLSIGRSALSTSQAALQVTGNNIANVDTEGYSKQTLITKDGSYVSGSAGQLGSG 60

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V  +++      F+E        A       Y  ++ +    +         +N + +  
Sbjct: 61  VVAQEVVRSHDQFIEAQYLQRGTARDRFQTLYAGLSSMQNLVN--------ESNSKGVNA 112

Query: 121 S 121
           S
Sbjct: 113 S 113


>gi|209964690|ref|YP_002297605.1| flagellar basal body rod protein FlgG [Rhodospirillum centenum SW]
 gi|209958156|gb|ACI98792.1| flagellar basal-body rod protein FlgG [Rhodospirillum centenum SW]
          Length = 261

 Score = 52.2 bits (123), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 20/42 (47%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           ++  NVN++ E  ++    R Y  N + I  S  MM +   +
Sbjct: 219 LETSNVNIVSEITNLITAQRAYEMNSRVISTSDQMMQSISQM 260



 Score = 37.5 bits (85), Expect = 0.55,   Method: Composition-based stats.
 Identities = 13/62 (20%), Positives = 24/62 (38%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          + S  I  +G+  Q   +++IS NIAN  TTG       ++         +  +      
Sbjct: 1  MRSLSIGATGMLAQQLNVEVISNNIANMTTTGFKRQRAEFQDLLYQNMRRVGSTSSDAGT 60

Query: 65 KI 66
           +
Sbjct: 61 VV 62


>gi|331006033|ref|ZP_08329375.1| Flagellar hook protein flgE [gamma proteobacterium IMCC1989]
 gi|330420162|gb|EGG94486.1| Flagellar hook protein flgE [gamma proteobacterium IMCC1989]
          Length = 877

 Score = 52.2 bits (123), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 12/77 (15%), Positives = 29/77 (37%)

Query: 55  MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
           +   G     +        +            SG ++  NV++  +  ++    R + AN
Sbjct: 800 LQSDGDTAWVQTFESGEPIIGGPGTASLGLIQSGALEDSNVDLSEQLVNLIIAQRNFQAN 859

Query: 115 LQTIKQSHDMMTTTLDL 131
            +TI+ +  +  T ++L
Sbjct: 860 AKTIETADTITQTIINL 876


>gi|307637788|gb|ADN80238.1| Flagellar hook-associated protein [Helicobacter pylori 908]
 gi|325996386|gb|ADZ51791.1| Flagellar hook-associated protein [Helicobacter pylori 2018]
 gi|325997974|gb|ADZ50182.1| Flagellar hook-associated protein [Helicobacter pylori 2017]
          Length = 606

 Score = 52.2 bits (123), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 21/122 (17%), Positives = 37/122 (30%), Gaps = 4/122 (3%)

Query: 16  AVQSARMQIISEN--IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVD--QS 71
                 +  I+ N  +AN          D Y  K       +         KI  D  +S
Sbjct: 485 TAIRPWLAPINGNFDVANMMQQLQYDSVDFYNDKFDIKPMKISEFYQFLTGKINTDAEKS 544

Query: 72  TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             + +             +    V+V  E  ++ +    Y AN + I     M+ T L +
Sbjct: 545 GRILDTKQSMLETIKKEQLSISQVSVDEEMVNLIKFQSGYAANAKVITAIDRMIDTLLGI 604

Query: 132 LR 133
            +
Sbjct: 605 KQ 606



 Score = 44.5 bits (103), Expect = 0.006,   Method: Composition-based stats.
 Identities = 15/99 (15%), Positives = 35/99 (35%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  +++S + + +GL    + + +   NI+NA     +      + +        + + G
Sbjct: 1  MGGILSSLNTSYTGLQAHQSMVDVTGNNISNASDEFYSRQRVIAKPQAAYMYGTKNMNMG 60

Query: 61 VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
          V V+ I      FV          N     ++ ++    
Sbjct: 61 VDVEAIERVHDEFVFARYTKANYENTYYDTEFSHLKEAS 99


>gi|163750568|ref|ZP_02157806.1| flagellar basal-body rod protein FlgG [Shewanella benthica KT99]
 gi|161329723|gb|EDQ00712.1| flagellar basal-body rod protein FlgG [Shewanella benthica KT99]
          Length = 262

 Score = 52.2 bits (123), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 14/78 (17%), Positives = 27/78 (34%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +   G     + G   +            A   G ++  NVNV  E  ++ ++ 
Sbjct: 179 FINPSGLDPMGQNLYLETGASGTPIQGTASLDGMGAIRQGALETSNVNVTEELVNLIQSQ 238

Query: 109 RLYMANLQTIKQSHDMMT 126
           R+Y  N + I     M++
Sbjct: 239 RIYEMNSKVISAVDQMLS 256



 Score = 39.5 bits (90), Expect = 0.16,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 21/41 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          + A+  I+ +GL  Q   + +IS N+ANA T G       +
Sbjct: 1  MQAALWISKTGLDAQQTNISVISNNLANASTIGYKKSRAVF 41


>gi|150395503|ref|YP_001325970.1| flagellar hook protein FlgE [Sinorhizobium medicae WSM419]
 gi|150027018|gb|ABR59135.1| flagellar basal body FlaE domain protein [Sinorhizobium medicae
           WSM419]
          Length = 402

 Score = 52.2 bits (123), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 15/84 (17%), Positives = 30/84 (35%)

Query: 50  SFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNR 109
              + +    G    +              G      SG ++  NV++  E   M E+ R
Sbjct: 319 QSPDKLKPESGNVYSQGVDSGVIITGFAGSGDFGEILSGALESSNVDIAEELTAMIESQR 378

Query: 110 LYMANLQTIKQSHDMMTTTLDLLR 133
            Y AN +  +   +++   ++L R
Sbjct: 379 NYTANSKVFQTGSELLEVLVNLKR 402



 Score = 48.7 bits (114), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 20/64 (31%), Positives = 30/64 (46%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            L  +     SG+  QS R+  ++ENIANA TTG    S  +    +      + SGGV
Sbjct: 1  MSLYGTMRTGVSGMNAQSNRLSTVAENIANANTTGYKRASTEFSSMILPSGNGAYNSGGV 60

Query: 62 RVKK 65
          + + 
Sbjct: 61 QTEV 64


>gi|317050614|ref|YP_004111730.1| flagellar hook-basal body protein [Desulfurispirillum indicum S5]
 gi|316945698|gb|ADU65174.1| flagellar hook-basal body protein [Desulfurispirillum indicum S5]
          Length = 259

 Score = 52.2 bits (123), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 22/108 (20%), Positives = 39/108 (36%), Gaps = 7/108 (6%)

Query: 29  IANARTTGDTPGS--DPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANA 86
           I NA+                    E  +   G  ++ ++  D   +  E    H     
Sbjct: 156 IINAQGEIFVDEEFIATLSLVRFEDERDLRKVGFNQLARVSADVEAYPAEHFELH----- 210

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
            G ++  NVN++ E  DM E NR + A  + I    + ++T L   + 
Sbjct: 211 QGYLESSNVNIVREMTDMVELNRSFSAYQKMISSIDETVSTLLQAGKS 258



 Score = 39.1 bits (89), Expect = 0.19,   Method: Composition-based stats.
 Identities = 9/37 (24%), Positives = 19/37 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPG 40
          ++   + + SG+ +QS ++   + N+AN  T G    
Sbjct: 1  MVNGLYTSASGMVLQSRKLDASANNLANVNTVGFKKD 37


>gi|241113584|ref|YP_002973419.1| protein of unknown function DUF1078 domain protein [Rhizobium
           leguminosarum bv. trifolii WSM1325]
 gi|240861792|gb|ACS59458.1| protein of unknown function DUF1078 domain protein [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 430

 Score = 52.2 bits (123), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 47/124 (37%), Gaps = 5/124 (4%)

Query: 11  ANSGLAVQSARMQ-IISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVD 69
           A S ++  S     ++S + AN  T             T++  + +    G      G+ 
Sbjct: 311 AASAVSSVSIGTDGVVSVSYANGATKALYQ----IPLATVASPDNLTLLSGNVYSANGLS 366

Query: 70  QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
             T           +  SG ++  NV++  E  +M E  R Y AN +  +   D+M   +
Sbjct: 367 GVTVTGFPQTNGLGSIQSGALESSNVDLAGELTEMIEAQRSYTANSKVFQTGSDIMDVLV 426

Query: 130 DLLR 133
           +L R
Sbjct: 427 NLKR 430



 Score = 48.3 bits (113), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 20/64 (31%), Positives = 31/64 (48%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            +  S   A SG++ Q+ R+  +S+NIANA TTG    S  +    +      + SGGV
Sbjct: 1  MSIFGSMKTAVSGMSAQANRLSTVSDNIANANTTGYKAVSTSFSSLVLPSSSGNYNSGGV 60

Query: 62 RVKK 65
          +   
Sbjct: 61 QTSV 64


>gi|315127351|ref|YP_004069354.1| flagellar basal body rod protein FlgG [Pseudoalteromonas sp.
           SM9913]
 gi|315015865|gb|ADT69203.1| flagellar basal body rod protein FlgG [Pseudoalteromonas sp.
           SM9913]
          Length = 262

 Score = 52.2 bits (123), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 27/78 (34%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +   G     +  V  +                G ++  NVNV  E  ++ ET 
Sbjct: 179 FINPSGLEPIGQNLYTETAVSGAPVQGNPGVEGLGTIIQGSLETSNVNVTEELVNLIETQ 238

Query: 109 RLYMANLQTIKQSHDMMT 126
           R+Y  N + I    +MM+
Sbjct: 239 RVYEMNSKVISAVDEMMS 256



 Score = 39.5 bits (90), Expect = 0.14,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  +  I+ +GL  Q   + +IS N+ANA T G       +
Sbjct: 1  MNPALWISKTGLDAQQTDISVISNNLANASTVGYKKSRAIF 41


>gi|163742565|ref|ZP_02149951.1| flagellar hook protein FlgE, putative [Phaeobacter gallaeciensis
           2.10]
 gi|161384150|gb|EDQ08533.1| flagellar hook protein FlgE, putative [Phaeobacter gallaeciensis
           2.10]
          Length = 440

 Score = 52.2 bits (123), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 22/43 (51%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +    +V  E  +M +T R Y +N + I+   +M+  T ++ R
Sbjct: 398 EESATDVAGELTNMIQTQRAYSSNAKVIQTVDEMLQETTNIKR 440



 Score = 38.3 bits (87), Expect = 0.40,   Method: Composition-based stats.
 Identities = 17/82 (20%), Positives = 32/82 (39%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            + +S +   +GL   ++R+  IS+NIAN+ T G       +    +S     + +GGV
Sbjct: 8  MTISSSLNAGVAGLTANASRLASISDNIANSSTAGYKRVQTDFHSMVMSSSGGTYSAGGV 67

Query: 62 RVKKIGVDQSTFVEEFDPGHPV 83
          R   + +               
Sbjct: 68 RTTNVRLIDERGPLVSTSNATD 89


>gi|327254554|gb|EGE66170.1| hypothetical protein ECSTEC7V_0308 [Escherichia coli STEC_7v]
          Length = 400

 Score = 52.2 bits (123), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 15/83 (18%), Positives = 29/83 (34%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
           T   ++ +    G    + G   +  +     G      SG ++  NV++  E  ++   
Sbjct: 316 TFPNDDGLQAVSGTAWVQTGESGTPLIGVPGSGTCGTLTSGALESSNVDITSELVNLMTA 375

Query: 108 NRLYMANLQTIKQSHDMMTTTLD 130
            R Y AN + I  S  +      
Sbjct: 376 QRNYQANTKVIATSTQLDDALFQ 398



 Score = 33.7 bits (75), Expect = 7.8,   Method: Composition-based stats.
 Identities = 14/32 (43%), Positives = 18/32 (56%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDT 38
          S  IA +GL   + ++  IS NIANA T G  
Sbjct: 2  SYEIAATGLNAVNEQLDGISNNIANAGTVGYK 33


>gi|253702499|ref|YP_003023688.1| hypothetical protein GM21_3913 [Geobacter sp. M21]
 gi|251777349|gb|ACT19930.1| protein of unknown function DUF1078 domain protein [Geobacter sp.
           M21]
          Length = 294

 Score = 52.2 bits (123), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 15/44 (34%), Positives = 22/44 (50%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++   V++  E   M  T R Y AN +TI  S  M    L+L+R
Sbjct: 251 LEQSTVDLANEFVKMITTQRAYSANSKTITTSDQMTQEVLNLIR 294


>gi|99082779|ref|YP_614933.1| hypothetical protein TM1040_2939 [Ruegeria sp. TM1040]
 gi|99039059|gb|ABF65671.1| Flagellar hook protein flgE [Ruegeria sp. TM1040]
          Length = 422

 Score = 52.2 bits (123), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 21/43 (48%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +    +V  E   M +T R Y +N + I+   +M+  T ++ R
Sbjct: 380 EESGTDVASELTTMIQTQRAYSSNAKVIQTVDEMLQETTNIKR 422



 Score = 36.8 bits (83), Expect = 0.94,   Method: Composition-based stats.
 Identities = 20/69 (28%), Positives = 31/69 (44%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            + +S +   +GLA  S R+  IS+NIAN+ T G       +    IS     + +GGV
Sbjct: 1  MTISSSLNAGVAGLAANSTRLAAISDNIANSSTAGYKRVVTSFESMVISQSGGRYAAGGV 60

Query: 62 RVKKIGVDQ 70
           V    +  
Sbjct: 61 SVNNTRMID 69


>gi|149184207|ref|ZP_01862525.1| hypothetical protein ED21_25853 [Erythrobacter sp. SD-21]
 gi|148831527|gb|EDL49960.1| hypothetical protein ED21_25853 [Erythrobacter sp. SD-21]
          Length = 261

 Score = 52.2 bits (123), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 16/98 (16%), Positives = 32/98 (32%)

Query: 34  TTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
             G           T      +   G    +  G+  +        G   +  SG ++  
Sbjct: 162 ADGSVEPVGAIALATFIAPTGLKKVGDANWEGTGLSGAATYGSPGTGAYGSLLSGALERS 221

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           NV++  E   +    R + AN + I  +  +  T ++L
Sbjct: 222 NVDIAEELVGLITAQRNFQANAKAIDTATQISQTVINL 259


>gi|254785371|ref|YP_003072800.1| flagellar basal body protein FlgE [Teredinibacter turnerae T7901]
 gi|237685119|gb|ACR12383.1| Flagellar basal body protein FlgE [Teredinibacter turnerae T7901]
          Length = 813

 Score = 52.2 bits (123), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 15/83 (18%), Positives = 33/83 (39%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            + ++ +   G     +        V     G   A  SG ++  NV++  E   +    
Sbjct: 730 FTNQQGLQPIGNTMWAESFASGPPNVGTPQSGALGAIQSGALEESNVDLSEELVRLIIAQ 789

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R + A+ +TI+ +  +  T ++L
Sbjct: 790 RNFQASAKTIETADQVTQTIINL 812


>gi|167623361|ref|YP_001673655.1| flagellar hook protein FlgE [Shewanella halifaxensis HAW-EB4]
 gi|167353383|gb|ABZ75996.1| flagellar basal body FlaE domain protein [Shewanella halifaxensis
           HAW-EB4]
          Length = 453

 Score = 52.2 bits (123), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 19/113 (16%), Positives = 43/113 (38%), Gaps = 1/113 (0%)

Query: 20  ARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQST-FVEEFD 78
             +++ ++ + NA  +  +              E      G    K  +D       E +
Sbjct: 340 TNVEVGADGLINASYSNGSTVPLARVALVSFANEQGLSQAGNTSWKASLDSGPALAGEAN 399

Query: 79  PGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G   +  S  ++  NV++  E  D+    R + AN +T++ ++ +  T L +
Sbjct: 400 SGTFGSIRSSALEQSNVDLTTELVDLISAQRNFQANSRTLEVNNTLQQTILQI 452



 Score = 37.9 bits (86), Expect = 0.42,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 18/39 (46%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          S +IA SG++     +   + NIAN  TTG       + 
Sbjct: 2  SFNIALSGISSAQKDLNTTANNIANVNTTGFKESRAEFA 40


>gi|153953785|ref|YP_001394550.1| hypothetical protein CKL_1160 [Clostridium kluyveri DSM 555]
 gi|219854401|ref|YP_002471523.1| hypothetical protein CKR_1058 [Clostridium kluyveri NBRC 12016]
 gi|146346666|gb|EDK33202.1| FlgE [Clostridium kluyveri DSM 555]
 gi|219568125|dbj|BAH06109.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 348

 Score = 52.2 bits (123), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 22/48 (45%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             G ++  NV++  +  DM    R + AN + I     ++   ++L R
Sbjct: 301 TQGFLEMSNVDLAQQFTDMIVATRAFQANGKMITNGDTILEDLINLKR 348



 Score = 35.6 bits (80), Expect = 2.3,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 21/42 (50%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S +   SGL     ++ +I  NIAN+ TT     S  ++
Sbjct: 1  MLPSMYSGISGLRANQQKLNVIGNNIANSSTTAYKTQSMNFQ 42


>gi|77463651|ref|YP_353155.1| flagellar proximal rod protein FlgF [Rhodobacter sphaeroides 2.4.1]
 gi|77388069|gb|ABA79254.1| flagellar proximal rod protein FlgF [Rhodobacter sphaeroides 2.4.1]
          Length = 251

 Score = 52.2 bits (123), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 27/67 (40%)

Query: 67  GVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           G  ++       P        G+++  NVN + E     E  R +  NL+ I  + ++  
Sbjct: 182 GRIRAGGEPLPPPDQRARVLQGVLEGSNVNTMEELVSSIELQRTFELNLRMISSAKELDE 241

Query: 127 TTLDLLR 133
           +   LLR
Sbjct: 242 SGARLLR 248


>gi|170735956|ref|YP_001777216.1| flagellar basal body FlaE domain-containing protein [Burkholderia
           cenocepacia MC0-3]
 gi|169818144|gb|ACA92726.1| flagellar basal body FlaE domain protein [Burkholderia cenocepacia
           MC0-3]
          Length = 414

 Score = 51.8 bits (122), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 17/83 (20%), Positives = 30/83 (36%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +    +   GG +  +        +      +        ++  NVN+  E  ++    
Sbjct: 331 FNNPNGLVNIGGNQYAETAASGVPQISAPGSTNHGTLQGSALENSNVNLTTELVNLITAQ 390

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y AN QTIK    +  T L+L
Sbjct: 391 RNYQANAQTIKTQQAVDQTLLNL 413


>gi|71282391|ref|YP_268224.1| flagellar basal body rod protein FlgG [Colwellia psychrerythraea
           34H]
 gi|71148131|gb|AAZ28604.1| flagellar basal-body rod protein FlgG [Colwellia psychrerythraea
           34H]
          Length = 262

 Score = 51.8 bits (122), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 26/78 (33%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +   G     +  V  +                G ++  NVN   E  ++ E+ 
Sbjct: 179 FVNPTGLQPIGQNLYTETAVSGAPQEGVPGLEGYGMLVQGALETSNVNTTEELVNLIESQ 238

Query: 109 RLYMANLQTIKQSHDMMT 126
           R+Y  N + I    +M++
Sbjct: 239 RVYEMNSKVISAVDEMLS 256



 Score = 37.5 bits (85), Expect = 0.62,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 22/41 (53%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          + A+  I+ +GL  Q+  + +IS N+ANA T G       +
Sbjct: 1  MNAALWISKTGLDAQTKDIAVISNNLANASTIGFKKSRAVF 41


>gi|15596277|ref|NP_249771.1| flagellar hook protein FlgE [Pseudomonas aeruginosa PAO1]
 gi|107100525|ref|ZP_01364443.1| hypothetical protein PaerPA_01001550 [Pseudomonas aeruginosa PACS2]
 gi|218892956|ref|YP_002441825.1| flagellar hook protein FlgE [Pseudomonas aeruginosa LESB58]
 gi|254234216|ref|ZP_04927539.1| flagellar hook protein FlgE [Pseudomonas aeruginosa C3719]
 gi|254239438|ref|ZP_04932760.1| flagellar hook protein FlgE [Pseudomonas aeruginosa 2192]
 gi|9946996|gb|AAG04469.1|AE004539_11 flagellar hook protein FlgE [Pseudomonas aeruginosa PAO1]
 gi|126166147|gb|EAZ51658.1| flagellar hook protein FlgE [Pseudomonas aeruginosa C3719]
 gi|126192816|gb|EAZ56879.1| flagellar hook protein FlgE [Pseudomonas aeruginosa 2192]
 gi|218773184|emb|CAW28996.1| flagellar hook protein FlgE [Pseudomonas aeruginosa LESB58]
          Length = 462

 Score = 51.8 bits (122), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 27/64 (42%)

Query: 68  VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
                 V     G   A  SG ++  NV++  E  ++    R Y AN +TI+    +  T
Sbjct: 398 ESGEPAVGAPRSGTLGALQSGALEASNVDISNELVNLIVHQRNYQANAKTIQTEDAVTQT 457

Query: 128 TLDL 131
            ++L
Sbjct: 458 IINL 461



 Score = 34.8 bits (78), Expect = 3.7,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 18/39 (46%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          S +I  SG+   S+ + +   NIANA T G       + 
Sbjct: 2  SFNIGLSGIQAASSGLNVTGNNIANAGTVGFKQSRAEFA 40


>gi|70731823|ref|YP_261565.1| flagellar hook protein FlgE [Pseudomonas fluorescens Pf-5]
 gi|68346122|gb|AAY93728.1| flagellar hook protein FlgE [Pseudomonas fluorescens Pf-5]
          Length = 447

 Score = 51.8 bits (122), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 21/103 (20%), Positives = 39/103 (37%), Gaps = 1/103 (0%)

Query: 29  IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASG 88
           +AN       P        + + E+ +   GG + K+         +    G   A  S 
Sbjct: 345 LANFSNEQTKPIGQ-ISLASFTNEQGLQPVGGTQWKETYSSGIPGYDAPKTGTLGAIQSN 403

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            ++  NVN+  E  ++ +    Y AN +TI     +M T + +
Sbjct: 404 SLEESNVNLTNELVNLIKAQSNYQANAKTISTQSTIMQTIIQM 446



 Score = 34.1 bits (76), Expect = 6.7,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 18/39 (46%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          S +I  SGL   + ++ +   NIAN  TTG       + 
Sbjct: 2  SFNIGLSGLYAANKQLDVTGNNIANVATTGFKSSRAEFA 40


>gi|332533173|ref|ZP_08409042.1| flagellar basal-body rod protein FlgG [Pseudoalteromonas
           haloplanktis ANT/505]
 gi|332037455|gb|EGI73909.1| flagellar basal-body rod protein FlgG [Pseudoalteromonas
           haloplanktis ANT/505]
          Length = 262

 Score = 51.8 bits (122), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 28/78 (35%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +   G     +  V  +            +   G ++  NVNV  E  ++ ET 
Sbjct: 179 FINPSGLEPIGQNLYTETAVSGAPVQGNPGVEGLGSIIQGSLETSNVNVTEELVNLIETQ 238

Query: 109 RLYMANLQTIKQSHDMMT 126
           R+Y  N + I    +MM+
Sbjct: 239 RIYEMNSKVISAVDEMMS 256



 Score = 39.5 bits (90), Expect = 0.15,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  +  I+ +GL  Q   + +IS N+ANA T G       +
Sbjct: 1  MNPALWISKTGLDAQQTDISVISNNLANASTVGYKKSRAIF 41


>gi|327192294|gb|EGE59259.1| flagellar hook protein FlgE [Rhizobium etli CNPAF512]
          Length = 483

 Score = 51.8 bits (122), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 42/111 (37%), Gaps = 4/111 (3%)

Query: 23  QIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHP 82
            ++S + AN    G T         T++  + +    G      G    T          
Sbjct: 377 GVVSVSYAN----GTTKALYQIPLATVASPDNLTLLSGNVYTANGRSGVTVTGFPQTNGL 432

Query: 83  VANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            +  SG ++  NV++  E  +M E  R Y AN +  +   D+M   ++L R
Sbjct: 433 GSIQSGALESSNVDLAGELTEMIEAQRSYTANSKVFQTGSDIMDVLVNLKR 483



 Score = 47.9 bits (112), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 30/64 (46%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             +  S   A SG++ Q+ R+  +S+NIANA T G    S  +    +      + SGGV
Sbjct: 54  MSIFGSMKTAVSGMSAQANRLSTVSDNIANANTVGYKAVSTSFSSLVLPSSSGNYNSGGV 113

Query: 62  RVKK 65
           +   
Sbjct: 114 QTSV 117


>gi|114570497|ref|YP_757177.1| flagellar basal body rod protein FlgG [Maricaulis maris MCS10]
 gi|114340959|gb|ABI66239.1| flagellar basal-body rod protein FlgG [Maricaulis maris MCS10]
          Length = 261

 Score = 51.8 bits (122), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 30/84 (35%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
           T   +  +   GG    +     S  +             G V+  NVN + E   + + 
Sbjct: 177 TFFNQAGLEAIGGNLFLETAASGSASLGTPGSPGFGDIQQGFVETSNVNSVSEITALIQA 236

Query: 108 NRLYMANLQTIKQSHDMMTTTLDL 131
            R Y  N + I  S +MM  + +L
Sbjct: 237 QRAYEMNARVITASDEMMAASSNL 260



 Score = 38.7 bits (88), Expect = 0.28,   Method: Composition-based stats.
 Identities = 12/62 (19%), Positives = 25/62 (40%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          + +   A +G+  Q   +++IS N+AN  TTG       ++       + M  +      
Sbjct: 1  MRALTTAATGMQAQQLNVEVISNNLANMNTTGFKRQRAEFQDLLYQNVQQMGAASSDAGT 60

Query: 65 KI 66
           +
Sbjct: 61 IV 62


>gi|291276999|ref|YP_003516771.1| flagellar hook protein FlgE [Helicobacter mustelae 12198]
 gi|290964193|emb|CBG40039.1| Putative flagellar hook protein, FlgE [Helicobacter mustelae 12198]
          Length = 600

 Score = 51.8 bits (122), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 17/120 (14%), Positives = 40/120 (33%), Gaps = 8/120 (6%)

Query: 14  GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTF 73
           G++    R+ I +   +N +      G+    ++T           G  +     D    
Sbjct: 489 GVSTPMGRIGIAA--FSNDQGLHKVGGNLFELKQTTDNNGDNKILSGAPILGWDGDGDGR 546

Query: 74  VEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++     H        ++  N +V     ++    R Y  N + +    D++   ++L R
Sbjct: 547 LKFGRVMHK------YLETSNTDVTSALTNLILMQRGYSMNAKALSTGDDLIKEAINLKR 600


>gi|253996319|ref|YP_003048383.1| flagellar hook protein FlgE [Methylotenera mobilis JLW8]
 gi|253982998|gb|ACT47856.1| flagellar basal body FlaE domain protein [Methylotenera mobilis
           JLW8]
          Length = 421

 Score = 51.8 bits (122), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 30/83 (36%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +    +   GG                   G      S  V+  NV++  E  +M    
Sbjct: 338 FTNPNGLQSLGGNAWAVSASSGPALTGAPGSGLLGVLQSSAVEDSNVDLTAELVNMITAQ 397

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R+Y AN QTIK    ++ T ++L
Sbjct: 398 RVYQANAQTIKTQDQVLQTLVNL 420


>gi|116049009|ref|YP_792189.1| flagellar hook protein FlgE [Pseudomonas aeruginosa UCBPP-PA14]
 gi|296390556|ref|ZP_06880031.1| flagellar hook protein FlgE [Pseudomonas aeruginosa PAb1]
 gi|313106035|ref|ZP_07792294.1| flagellar hook protein FlgE [Pseudomonas aeruginosa 39016]
 gi|115584230|gb|ABJ10245.1| flagellar hook protein FlgE [Pseudomonas aeruginosa UCBPP-PA14]
 gi|310878796|gb|EFQ37390.1| flagellar hook protein FlgE [Pseudomonas aeruginosa 39016]
          Length = 462

 Score = 51.8 bits (122), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 27/64 (42%)

Query: 68  VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
                 V     G   A  SG ++  NV++  E  ++    R Y AN +TI+    +  T
Sbjct: 398 ESGEPAVGAPRSGTLGALQSGALEASNVDISNELVNLIVHQRNYQANAKTIQTEDAVTQT 457

Query: 128 TLDL 131
            ++L
Sbjct: 458 IINL 461



 Score = 34.8 bits (78), Expect = 3.8,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 18/39 (46%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          S +I  SG+   S+ + +   NIANA T G       + 
Sbjct: 2  SFNIGLSGIQAASSGLNVTGNNIANAGTVGFKQSRAEFA 40


>gi|242310749|ref|ZP_04809904.1| flagellar hook protein flge [Helicobacter pullorum MIT 98-5489]
 gi|239523147|gb|EEQ63013.1| flagellar hook protein flge [Helicobacter pullorum MIT 98-5489]
          Length = 764

 Score = 51.8 bits (122), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 20/46 (43%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
           +++  NV+      D+    R Y  + ++I  +  +M   + L R 
Sbjct: 719 MLETSNVDTGTALTDLIVYQRGYQMSAKSITTADQLMQEAIQLKRS 764


>gi|302383956|ref|YP_003819779.1| flagellar basal-body rod protein FlgG [Brevundimonas subvibrioides
           ATCC 15264]
 gi|302194584|gb|ADL02156.1| flagellar basal-body rod protein FlgG [Brevundimonas subvibrioides
           ATCC 15264]
          Length = 262

 Score = 51.8 bits (122), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 13/85 (15%), Positives = 27/85 (31%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
           T   E  +   G   + +                      G  +  NV+ + E + +   
Sbjct: 177 TFFNEAGLEAIGDNLLLETAASGPATTGTPGETGFGQLLQGYTEASNVDAVTEISALIIA 236

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLL 132
            R Y  N + I  + +MM+ +  + 
Sbjct: 237 QRAYEMNSKVITTADEMMSVSAQVK 261



 Score = 42.9 bits (99), Expect = 0.014,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 25/62 (40%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          + +   A SG+A Q   +++IS NIAN  T G       ++       E M      +  
Sbjct: 1  MRALRTAASGMAAQQLNVEVISNNIANMNTVGYKRQRAEFQDLIYQNVERMGAQSSSQGT 60

Query: 65 KI 66
           +
Sbjct: 61 VV 62


>gi|218678737|ref|ZP_03526634.1| flagellar hook protein FlgE [Rhizobium etli CIAT 894]
          Length = 112

 Score = 51.8 bits (122), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 19/86 (22%), Positives = 34/86 (39%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
           T++  + +    G      G    T           +  SG ++  NV++  E  +M E 
Sbjct: 27  TVASPDNLTLMSGNVYSANGQSGVTVTGFPQTNGLGSIQSGALESSNVDLAGELTEMIEA 86

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y AN +  +   D+M   ++L R
Sbjct: 87  QRSYTANSKVFQTGSDIMDVLVNLKR 112


>gi|300024606|ref|YP_003757217.1| flagellar basal-body rod protein FlgG [Hyphomicrobium denitrificans
           ATCC 51888]
 gi|299526427|gb|ADJ24896.1| flagellar basal-body rod protein FlgG [Hyphomicrobium denitrificans
           ATCC 51888]
          Length = 262

 Score = 51.8 bits (122), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 21/123 (17%), Positives = 41/123 (33%), Gaps = 3/123 (2%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           I +  I ++   VQ   +    +  A    TG             + E  +   GG   +
Sbjct: 137 IPNITIPSTATDVQ---INASGQVYAIIGATGQQQLLGQLSIANFANETGLDALGGNLFR 193

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           +     +  +             G ++  NV+ + E  ++    R Y  N + I  + DM
Sbjct: 194 ENQASGAAVIGNPGDSGFAKIHQGYLESSNVDPVKEITELIAAQRAYEMNSKVISAADDM 253

Query: 125 MTT 127
            +T
Sbjct: 254 FST 256



 Score = 41.4 bits (95), Expect = 0.040,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 22/40 (55%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          + +  IA +G++ Q   +++I+ N+AN  TTG       +
Sbjct: 1  MRALSIAATGMSAQQTNVEVIANNVANINTTGFKRARAEF 40


>gi|255262922|ref|ZP_05342264.1| flagellar hook protein FlgE [Thalassiobium sp. R2A62]
 gi|255105257|gb|EET47931.1| flagellar hook protein FlgE [Thalassiobium sp. R2A62]
          Length = 422

 Score = 51.8 bits (122), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 20/43 (46%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +    +V  E   + +T R Y  N + I+   +M+  T ++ R
Sbjct: 380 EESTTDVAAELTQLIQTQRAYSTNAKVIQTVDEMLQETTNIKR 422



 Score = 35.6 bits (80), Expect = 2.0,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 31/70 (44%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            + +S +   +GLA  ++++  IS+NIAN+ T G       +           + +GGV
Sbjct: 1  MTISSSLNAGIAGLAANASKLATISDNIANSSTFGYKRAGADFHSLVTGSGNGTYSAGGV 60

Query: 62 RVKKIGVDQS 71
           V    +  +
Sbjct: 61 SVTTQRMVDA 70


>gi|240145497|ref|ZP_04744098.1| flagellar basal body and hook protein [Roseburia intestinalis
           L1-82]
 gi|257202312|gb|EEV00597.1| flagellar basal body and hook protein [Roseburia intestinalis
           L1-82]
          Length = 551

 Score = 51.8 bits (122), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 25/53 (47%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
              +  SG ++  NV++  E   M  T R + AN + I  S  ++   ++L R
Sbjct: 499 DGSSMTSGELEMSNVDLSTEFTQMIITQRGFQANSRIITTSDTLLEELVNLKR 551



 Score = 38.3 bits (87), Expect = 0.36,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 20/42 (47%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S + A SGL     +M +I  NIAN  T      S  ++
Sbjct: 1  MMRSMYSAVSGLKTHQTKMDVIGNNIANVNTVAFKSSSVVFQ 42


>gi|59712481|ref|YP_205257.1| flagellar hook protein FlgE [Vibrio fischeri ES114]
 gi|197335363|ref|YP_002156700.1| flagellar hook protein [Vibrio fischeri MJ11]
 gi|24459277|gb|AAL86630.1| FlgE [Vibrio fischeri ES114]
 gi|59480582|gb|AAW86369.1| flagellar hook protein FlgE [Vibrio fischeri ES114]
 gi|197316853|gb|ACH66300.1| flagellar hook protein [Vibrio fischeri MJ11]
          Length = 432

 Score = 51.8 bits (122), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 17/106 (16%), Positives = 41/106 (38%)

Query: 26  SENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVAN 85
           S NI  + + G            ++ ++ +  +GG +        +    E + G     
Sbjct: 326 SGNIVGSYSNGKDVTLGRVAMVRVTNQQGLAQNGGTQWSTTQASGAAIWGEANQGSFGDI 385

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            SG ++  N+++  E  D+    R + AN +++   + +    L +
Sbjct: 386 QSGTLEQSNIDMTQELVDLISAQRNFQANSRSLDVHNQLQQNILQI 431



 Score = 36.0 bits (81), Expect = 1.9,   Method: Composition-based stats.
 Identities = 12/35 (34%), Positives = 16/35 (45%)

Query: 10 IANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +A SGLA     +   S N+ANA T G       +
Sbjct: 4  VALSGLAAAQKDLNTTSNNLANANTYGFKESRAEF 38


>gi|326792666|ref|YP_004310487.1| flagellar basal-body rod protein FlgF [Clostridium lentocellum DSM
           5427]
 gi|326543430|gb|ADZ85289.1| flagellar basal-body rod protein FlgF [Clostridium lentocellum DSM
           5427]
          Length = 255

 Score = 51.8 bits (122), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 22/48 (45%), Gaps = 1/48 (2%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD-LLR 133
            G ++  NVN +    DM   +R Y  N + I+    ++   ++ L R
Sbjct: 207 QGYLESANVNPVTAMVDMITVSRAYETNQKMIQVQDSLLGKAVNELGR 254



 Score = 37.9 bits (86), Expect = 0.51,   Method: Composition-based stats.
 Identities = 18/101 (17%), Positives = 36/101 (35%), Gaps = 6/101 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           ++   + A +G+ VQ+ R++IIS ++AN  TTG                  ++ +     
Sbjct: 1   MVRGLYTAATGMNVQAKRLEIISNDLANTTTTGYKKDVAVVSSFQEVLMTRLNDTQNQ-- 58

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
               V  +  +     G  +          +V    E  D+
Sbjct: 59  ----VPNNGPIGNITYGAKIDEVYTDFTQGSVISTGEMVDV 95


>gi|238927475|ref|ZP_04659235.1| flagellar hook protein FlgE [Selenomonas flueggei ATCC 43531]
 gi|238884757|gb|EEQ48395.1| flagellar hook protein FlgE [Selenomonas flueggei ATCC 43531]
          Length = 680

 Score = 51.8 bits (122), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 27/48 (56%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            +  ++  NV++  + +DM  T R + +N + I  S +M+ T +++ R
Sbjct: 633 TTSALEMSNVDLADQFSDMIITQRGFQSNSKMITVSDEMLETLINMKR 680



 Score = 39.1 bits (89), Expect = 0.20,   Method: Composition-based stats.
 Identities = 16/57 (28%), Positives = 20/57 (35%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          +I S   A SGL     RM ++  NIAN  TTG       +               G
Sbjct: 1  MIRSMFSAVSGLKGHQTRMDVVGNNIANVNTTGFKASRVTFADMISQNLSGASAPNG 57


>gi|254445148|ref|ZP_05058624.1| conserved domain protein [Verrucomicrobiae bacterium DG1235]
 gi|198259456|gb|EDY83764.1| conserved domain protein [Verrucomicrobiae bacterium DG1235]
          Length = 510

 Score = 51.8 bits (122), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 17/82 (20%), Positives = 34/82 (41%)

Query: 52  EEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
           + +    G   VK+        ++        +   G ++  NV++  E A+M  T R +
Sbjct: 429 QNLYSSFGAAGVKESQNGNIDGLQVAGTNGLGSIQQGALELSNVDLTNEFANMITTQRGF 488

Query: 112 MANLQTIKQSHDMMTTTLDLLR 133
            A  + I  S D++   ++L R
Sbjct: 489 QAGSRIITVSDDILQEVVNLKR 510


>gi|307748584|gb|ADN91854.1| Hypothetical protein CJM1_1678 [Campylobacter jejuni subsp. jejuni
           M1]
          Length = 88

 Score = 51.8 bits (122), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 18/83 (21%), Positives = 31/83 (37%)

Query: 51  FEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRL 110
               +   GG   K      +  V E   G      +  ++  NV++     ++    R 
Sbjct: 6   NNSGLEEIGGNLFKVTANSGNIVVGEAGTGGRGEMKTSALEMSNVDLSRSLTELIIIQRG 65

Query: 111 YMANLQTIKQSHDMMTTTLDLLR 133
           Y AN +TI  S  M+ T + L +
Sbjct: 66  YQANSKTISTSDQMLQTLIQLKQ 88


>gi|302872713|ref|YP_003841349.1| fagellar hook-basal body protein [Caldicellulosiruptor obsidiansis
           OB47]
 gi|302575572|gb|ADL43363.1| fagellar hook-basal body protein [Caldicellulosiruptor obsidiansis
           OB47]
          Length = 255

 Score = 51.8 bits (122), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 18/44 (40%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            G ++  NVN + E  +M    R Y AN +      + +   + 
Sbjct: 207 QGYLEGSNVNSVQEMVNMINVLRAYEANQKAFTIQDETLQKAVS 250



 Score = 35.2 bits (79), Expect = 3.2,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 18/39 (46%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSD 42
          +I   + + SG+ +    M I + N+AN  TTG      
Sbjct: 1  MIRGIYTSASGMILNQKLMDITANNVANVNTTGFKRDVA 39


>gi|188587648|ref|YP_001920210.1| flagellar hook protein FlgE [Clostridium botulinum E3 str. Alaska
           E43]
 gi|188497929|gb|ACD51065.1| flagellar hook protein FlgE [Clostridium botulinum E3 str. Alaska
           E43]
          Length = 366

 Score = 51.8 bits (122), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 23/47 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NV++  +  DM    R + A+ + I    +++ T   L+R
Sbjct: 320 QGALESSNVDLTEQFTDMITATRAFQASSKMITTGDEILQTITGLMR 366



 Score = 36.4 bits (82), Expect = 1.3,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          ++ S +   SG+     ++ +I  NIAN  TTG    S  +
Sbjct: 1  MLRSMYSGISGMKTNQVKLDVIGNNIANVSTTGFKSSSARF 41


>gi|20806698|ref|NP_621869.1| flagellar basal body and hook proteins [Thermoanaerobacter
           tengcongensis MB4]
 gi|20515152|gb|AAM23473.1| Flagellar basal body and hook proteins [Thermoanaerobacter
           tengcongensis MB4]
          Length = 251

 Score = 51.8 bits (122), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 20/45 (44%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             G ++  NVN + E  +M    R Y +N + +    + +   ++
Sbjct: 202 KQGFLEGSNVNSVKEMVNMISVMRNYESNQKVVTAFDETLGKAVN 246



 Score = 42.2 bits (97), Expect = 0.027,   Method: Composition-based stats.
 Identities = 12/37 (32%), Positives = 20/37 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPG 40
          +I   + A SG+  Q+  M +++ N+ANA T G    
Sbjct: 1  MIRGLYTAASGMLAQTKVMDVLANNLANANTVGYKKD 37


>gi|116250500|ref|YP_766338.1| flagellar hook protein FlgE [Rhizobium leguminosarum bv. viciae
           3841]
 gi|115255148|emb|CAK06222.1| flagellar hook protein (agr_c_1012p) [Rhizobium leguminosarum bv.
           viciae 3841]
          Length = 433

 Score = 51.8 bits (122), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 17/82 (20%), Positives = 31/82 (37%)

Query: 52  EEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
            + +    G      G    T              +G ++  NV++  E  +M E+ R Y
Sbjct: 352 PDKLTLMSGNVYSANGQSGVTVTGFPQTNGLGTIKAGALEGSNVDLAGELTEMIESQRSY 411

Query: 112 MANLQTIKQSHDMMTTTLDLLR 133
            AN +  +   D+M   ++L R
Sbjct: 412 TANSKVFQTGSDIMDVLVNLKR 433



 Score = 47.9 bits (112), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 29/64 (45%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            +  S   A SG+  Q+ R+  +++NIAN  TTG    S  +    +      + SGGV
Sbjct: 1  MSIFGSMKTAVSGMNAQANRLSTVADNIANVNTTGYKAVSTSFSSLVLPSSGGNYNSGGV 60

Query: 62 RVKK 65
          +   
Sbjct: 61 QTSV 64


>gi|254248705|ref|ZP_04942025.1| Flagellar hook protein FlgE [Burkholderia cenocepacia PC184]
 gi|124875206|gb|EAY65196.1| Flagellar hook protein FlgE [Burkholderia cenocepacia PC184]
          Length = 414

 Score = 51.8 bits (122), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 17/83 (20%), Positives = 29/83 (34%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +    +   GG +  +        V      +        ++  NVN+  E  ++    
Sbjct: 331 FNNPNGLVNIGGNQYAETAASGVPQVSAPGSTNHGTLQGSALENSNVNLTTELVNLITAQ 390

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y AN QTIK    +    L+L
Sbjct: 391 RNYQANAQTIKTQQAVDQALLNL 413


>gi|157961171|ref|YP_001501205.1| flagellar hook protein FlgE [Shewanella pealeana ATCC 700345]
 gi|157846171|gb|ABV86670.1| flagellar basal body FlaE domain protein [Shewanella pealeana ATCC
           700345]
          Length = 453

 Score = 51.8 bits (122), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 19/113 (16%), Positives = 43/113 (38%), Gaps = 1/113 (0%)

Query: 20  ARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQST-FVEEFD 78
             +++ ++ + NA  +  +              E      G    K  +D       E +
Sbjct: 340 TNVEVGADGLINASYSNGSTVPLARVALVSFANEQGLSQAGNTSWKASLDSGPALAGEAN 399

Query: 79  PGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G   +  S  ++  NV++  E  D+    R + AN +T++ ++ +  T L +
Sbjct: 400 SGTFGSIRSSALEQSNVDLTTELVDLISAQRNFQANSRTLEVNNTLQQTVLQI 452



 Score = 37.9 bits (86), Expect = 0.46,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 18/39 (46%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          S +IA SG++     +   + NIAN  TTG       + 
Sbjct: 2  SFNIALSGISSAQKDLNTTANNIANVNTTGFKESRAEFA 40


>gi|307293787|ref|ZP_07573631.1| fagellar hook-basal body protein [Sphingobium chlorophenolicum L-1]
 gi|306879938|gb|EFN11155.1| fagellar hook-basal body protein [Sphingobium chlorophenolicum L-1]
          Length = 280

 Score = 51.8 bits (122), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 15/83 (18%), Positives = 37/83 (44%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            + +E +  SG           +  +   + G   +  SG ++  NV++  E  ++    
Sbjct: 196 FNSQEGLRQSGDAHWTATNASGAPMLGTGNSGLFGSVRSGALERSNVDITEELVNLISAQ 255

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R + AN + I+ ++ + TT +++
Sbjct: 256 RNFQANSKAIEAANTLSTTIVNM 278



 Score = 36.4 bits (82), Expect = 1.3,   Method: Composition-based stats.
 Identities = 9/38 (23%), Positives = 16/38 (42%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          S +I+ SGL      +   + N+AN  +T        +
Sbjct: 2  SFYISLSGLKAAQTDLSTTANNVANVNSTAFKKSKAVF 39


>gi|218703527|ref|YP_002411046.1| flagellar basal body rod protein FlgG [Escherichia coli UMN026]
 gi|218430624|emb|CAR11490.1| Flagellar basal-body rod protein (flgG-like) (Distal rod protein)
           [Escherichia coli UMN026]
          Length = 303

 Score = 51.8 bits (122), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 10/78 (12%), Positives = 22/78 (28%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +    +   G     +                        ++  NV+++ E   M    
Sbjct: 220 FANPAGLSAEGDNLYLETAASGQPTEGVPGEDGLGTLQDNALEGSNVDIVNEMVAMITVQ 279

Query: 109 RLYMANLQTIKQSHDMMT 126
           R Y  N + +  + DM+ 
Sbjct: 280 RAYEMNAKMVSAADDMLQ 297



 Score = 39.9 bits (91), Expect = 0.13,   Method: Composition-based stats.
 Identities = 15/42 (35%), Positives = 23/42 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          + A+  I+ +GL+ Q A M  I+ NIAN  TTG       ++
Sbjct: 43 MNAALWISKTGLSAQDAEMSAIANNIANVNTTGFKRDRVMFQ 84


>gi|300854216|ref|YP_003779200.1| putative flagellar hook protein FlgE [Clostridium ljungdahlii DSM
           13528]
 gi|300434331|gb|ADK14098.1| predicted flagellar hook protein FlgE [Clostridium ljungdahlii DSM
           13528]
          Length = 323

 Score = 51.8 bits (122), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 11/54 (20%), Positives = 24/54 (44%)

Query: 80  GHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            +  +   G ++  NV++  +  DM    R + AN + I     ++   ++L R
Sbjct: 270 TNYGSLNQGALEMSNVDLAQQFTDMIVATRAFQANGKIITTDDTILEDLVNLKR 323



 Score = 36.4 bits (82), Expect = 1.2,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 28/70 (40%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ S + A SGL V   ++ + S+NIAN+ TTG    +  +                  +
Sbjct: 1  MLPSLYTAISGLRVNQQKLNVTSDNIANSSTTGFKSKNMIFEDMLSQNLSDPSAPVDGGL 60

Query: 64 KKIGVDQSTF 73
            I   QS  
Sbjct: 61 GGINARQSGL 70


>gi|322435952|ref|YP_004218164.1| flagellar basal-body rod protein FlgG [Acidobacterium sp. MP5ACTX9]
 gi|321163679|gb|ADW69384.1| flagellar basal-body rod protein FlgG [Acidobacterium sp. MP5ACTX9]
          Length = 262

 Score = 51.8 bits (122), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 20/133 (15%), Positives = 43/133 (32%), Gaps = 4/133 (3%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             LI S  I ++   V  +   ++S   A              +    +    ++ +G  
Sbjct: 133 MSLIPSITIPSNATNVTISPYGVVS---ATLPGQTAAAQLGTLQLANFANPGGLNSAGNS 189

Query: 62  RVKKIGVDQSTFVEEFD-PGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
              +     +   +             G ++  NV+V+ E   M    R Y +N + +  
Sbjct: 190 LFTQTTSSGNPVTDTPGGTSGVGTLEQGYLENSNVDVVTEFVQMILAQRAYESNSKVVHV 249

Query: 121 SHDMMTTTLDLLR 133
           + DM      ++R
Sbjct: 250 ADDMYQQINGMIR 262



 Score = 40.6 bits (93), Expect = 0.072,   Method: Composition-based stats.
 Identities = 12/33 (36%), Positives = 21/33 (63%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          +I + + A SG++ Q A +  I+ N+AN+ T G
Sbjct: 1  MIRALYTAASGMSAQQANLDTIANNLANSATAG 33


>gi|226939374|ref|YP_002794447.1| Flagellar hook protein FlgE [Laribacter hongkongensis HLHK9]
 gi|226714300|gb|ACO73438.1| Flagellar hook protein FlgE [Laribacter hongkongensis HLHK9]
          Length = 526

 Score = 51.8 bits (122), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 15/83 (18%), Positives = 34/83 (40%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            + ++ +   G  R  +     +  + +    +     S  ++  NV++  E  +M    
Sbjct: 443 FANQQGLQPIGNNRWMETYNSGNPTLNDPGSTNVGLIQSQALEDSNVDLTGELVNMITAQ 502

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y AN QTIK    ++ + + +
Sbjct: 503 RYYQANAQTIKVHDQVLQSLMQM 525


>gi|170755157|ref|YP_001782254.1| flagellar basal body rod protein FlgG [Clostridium botulinum B1
           str. Okra]
 gi|169120369|gb|ACA44205.1| flagellar basal body rod protein [Clostridium botulinum B1 str.
           Okra]
          Length = 263

 Score = 51.8 bits (122), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 20/116 (17%), Positives = 41/116 (35%), Gaps = 3/116 (2%)

Query: 21  RMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEE---F 77
           R+   S+N  N    G     D      +  +  ++ + G              +E    
Sbjct: 148 RIGEFSKNNINIAEDGSISVKDIDGINKMVGKINIYNAVGSDAFVSIGRNLYIPQEGVNV 207

Query: 78  DPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
              + V+   G ++  NV+   E  +M  T R +  + + IK + +M     +L +
Sbjct: 208 FANNDVSILQGFLENSNVDAGKEMTEMIITQRAFELSSRGIKTADEMWGIVNNLRK 263



 Score = 40.6 bits (93), Expect = 0.066,   Method: Composition-based stats.
 Identities = 12/61 (19%), Positives = 23/61 (37%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ +   + SGL  Q  ++  IS N+AN  T G       ++       +        R 
Sbjct: 1  MLRALWNSKSGLIAQQNKLDSISNNLANVNTVGYKREDVSFQELVQETLKRKGYPTSDRP 60

Query: 64 K 64
          +
Sbjct: 61 E 61


>gi|218887603|ref|YP_002436924.1| hypothetical protein DvMF_2517 [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|218758557|gb|ACL09456.1| protein of unknown function DUF1078 domain protein [Desulfovibrio
           vulgaris str. 'Miyazaki F']
          Length = 259

 Score = 51.8 bits (122), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 11/52 (21%), Positives = 21/52 (40%)

Query: 79  PGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           P      A G ++  NV V+ E  +M E  R + A  + ++ +  +      
Sbjct: 202 PAERAYVAQGYLEASNVEVVSEMVNMIEAQRQFEAYQKVMQTTDSIDREATQ 253


>gi|299131804|ref|ZP_07024999.1| fagellar hook-basal body protein [Afipia sp. 1NLS2]
 gi|298591941|gb|EFI52141.1| fagellar hook-basal body protein [Afipia sp. 1NLS2]
          Length = 604

 Score = 51.8 bits (122), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 22/125 (17%), Positives = 37/125 (29%), Gaps = 3/125 (2%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
            I N G      +   IS N        +    D       +F                 
Sbjct: 483 QIQNDGFPAGQLQTVSISNNGRVVGNYSNGRNIDLAAITLATFNGPNFLKRVDGGAFEVT 542

Query: 69  DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
           D+S                  ++  N ++  E   +  T + Y AN + I  S+ M+   
Sbjct: 543 DESGQALFGK---GGTIVGSSLEGSNTDIADEFTKLIVTQQAYSANTKVITTSNQMVQDL 599

Query: 129 LDLLR 133
           L++LR
Sbjct: 600 LNVLR 604


>gi|107026757|ref|YP_624268.1| flagellar hook protein FlgE [Burkholderia cenocepacia AU 1054]
 gi|116692051|ref|YP_837584.1| flagellar hook protein FlgE [Burkholderia cenocepacia HI2424]
 gi|105896131|gb|ABF79295.1| flagellar basal body FlaE [Burkholderia cenocepacia AU 1054]
 gi|116650051|gb|ABK10691.1| flagellar basal body FlaE domain protein [Burkholderia cenocepacia
           HI2424]
          Length = 414

 Score = 51.8 bits (122), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 17/83 (20%), Positives = 30/83 (36%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +    +   GG +  +        +      +        ++  NVN+  E  ++    
Sbjct: 331 FNNPNGLVNIGGNQYAETAASGVPQISAPGSTNHGTLQGSALENSNVNLTTELVNLITAQ 390

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y AN QTIK    +  T L+L
Sbjct: 391 RNYQANAQTIKTQQAVDQTLLNL 413


>gi|78062976|ref|YP_372884.1| flagellar hook protein FlgE [Burkholderia sp. 383]
 gi|77970861|gb|ABB12240.1| conserved hypothetical protein [Burkholderia sp. 383]
          Length = 414

 Score = 51.8 bits (122), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 15/83 (18%), Positives = 31/83 (37%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +    +   GG +  +        +      +        ++  NV++  E  ++ +  
Sbjct: 331 FNNPNGLENIGGNQYVETAASGVPQISAPGSTNHGTLQGSALENSNVDLTTELVNLIKAQ 390

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y AN QTIK    +  T L++
Sbjct: 391 RDYQANAQTIKTQQTVDQTLLNM 413


>gi|253682153|ref|ZP_04862950.1| flagellar basal body rod protein FlgG [Clostridium botulinum D str.
           1873]
 gi|253561865|gb|EES91317.1| flagellar basal body rod protein FlgG [Clostridium botulinum D str.
           1873]
          Length = 262

 Score = 51.8 bits (122), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 27/144 (18%), Positives = 47/144 (32%), Gaps = 18/144 (12%)

Query: 6   ASAHIANSGLAV--QSARMQIISENIANART----------TGDTPGSDPYRRKTISFEE 53
            S +I  SG  V     R+ I++EN  +  T               G     +       
Sbjct: 116 GSFNIDPSGTVVDKNGNRLVILNENGIDVNTGRAGFTKESFNVSEDGYLRSDKHRGLRIP 175

Query: 54  VMHGSGGVRVKKIGVD------QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
           +    G   +K IG +      Q     +       +   G  +  NV++  E  D+  T
Sbjct: 176 IYDTIGDNSMKSIGENLYTPLIQGNGRNDVIESKDFSLLQGFTEQSNVDLGKEMTDLIVT 235

Query: 108 NRLYMANLQTIKQSHDMMTTTLDL 131
            R +  N   +K + +M     +L
Sbjct: 236 QRAFQLNSSALKTADEMWGMANNL 259



 Score = 36.4 bits (82), Expect = 1.3,   Method: Composition-based stats.
 Identities = 11/35 (31%), Positives = 20/35 (57%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDT 38
          ++ S   + SG+A +  ++  IS N+AN+ T G  
Sbjct: 1  MLRSIWNSRSGMAAEMDKLDAISNNMANSTTVGYK 35


>gi|221639494|ref|YP_002525756.1| Flagellar proximal rod protein FlgF [Rhodobacter sphaeroides KD131]
 gi|221160275|gb|ACM01255.1| Flagellar proximal rod protein FlgF [Rhodobacter sphaeroides KD131]
          Length = 251

 Score = 51.8 bits (122), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 27/67 (40%)

Query: 67  GVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           G  ++       P        G+++  NVN + E     E  R +  NL+ I  + ++  
Sbjct: 182 GRIRARGEPLPPPDQRARVLQGVLEGSNVNTMEELVSSIELQRTFELNLRMISSAKELDE 241

Query: 127 TTLDLLR 133
           +   LLR
Sbjct: 242 SGARLLR 248


>gi|116248740|ref|YP_764581.1| flagellar hook protein FlgE [Rhizobium leguminosarum bv. viciae
           3841]
 gi|115253390|emb|CAK11778.1| putative flagellar hook protein flgE [Rhizobium leguminosarum bv.
           viciae 3841]
          Length = 430

 Score = 51.8 bits (122), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 47/124 (37%), Gaps = 5/124 (4%)

Query: 11  ANSGLAVQSA-RMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVD 69
           A S ++  S     ++S + AN  T             T++  + +    G      G+ 
Sbjct: 311 AASAVSSVSIGADGVVSVSYANGATKALYQ----IPLATVASPDNLTLLSGNVYSANGLS 366

Query: 70  QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
             T           +  SG ++  NV++  E  +M E  R Y AN +  +   D+M   +
Sbjct: 367 GVTVTGFPQTNGLGSIQSGALESSNVDLAGELTEMIEAQRSYTANSKVFQTGSDIMDVLV 426

Query: 130 DLLR 133
           +L R
Sbjct: 427 NLKR 430



 Score = 47.9 bits (112), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 20/64 (31%), Positives = 31/64 (48%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            +  S   A SG++ Q+ R+  +S+NIANA TTG    S  +    +      + SGGV
Sbjct: 1  MSIFGSMKTAVSGMSAQANRLSTVSDNIANANTTGYKAVSTSFSSLVLPSSSGNYNSGGV 60

Query: 62 RVKK 65
          +   
Sbjct: 61 QTSV 64


>gi|251780251|ref|ZP_04823171.1| flagellar hook protein FlgE [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
 gi|243084566|gb|EES50456.1| flagellar hook protein FlgE [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
          Length = 366

 Score = 51.8 bits (122), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 23/47 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NV++  +  DM    R + A+ + I    +++ T   L+R
Sbjct: 320 QGALESSNVDLTEQFTDMITATRAFQASSKMITTGDEILQTITGLMR 366



 Score = 36.4 bits (82), Expect = 1.4,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          ++ S +   SG+     ++ +I  NIAN  TTG    S  +
Sbjct: 1  MLRSMYSGISGMKTNQVKLDVIGNNIANVSTTGFKSSSARF 41


>gi|188579867|ref|YP_001923312.1| flagellar basal body rod protein FlgG [Methylobacterium populi
           BJ001]
 gi|179343365|gb|ACB78777.1| flagellar basal-body rod protein FlgG [Methylobacterium populi
           BJ001]
          Length = 262

 Score = 51.8 bits (122), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 19/42 (45%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
             G ++  NV+ + E   +    R +  N + I+ + +M  T
Sbjct: 215 QQGYLEGSNVDPVKEITSLITAQRAFEMNSKVIQAADEMAGT 256



 Score = 42.2 bits (97), Expect = 0.024,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 22/40 (55%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          + +  IA +G++ Q   +++I+ NIAN  TTG       +
Sbjct: 1  MRALAIAATGMSAQQLNLEVIANNIANLNTTGFKGARAEF 40


>gi|123442784|ref|YP_001006761.1| flagellar hook protein FlgE [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|332161322|ref|YP_004297899.1| flagellar hook protein FlgE [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|122089745|emb|CAL12598.1| flagellar hook protein FlgE [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|318605242|emb|CBY26740.1| flagellar hook protein FlgE [Yersinia enterocolitica subsp.
           palearctica Y11]
 gi|325665552|gb|ADZ42196.1| flagellar hook protein FlgE [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|330860606|emb|CBX70903.1| flagellar hook protein flgE [Yersinia enterocolitica W22703]
          Length = 419

 Score = 51.8 bits (122), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 34/83 (40%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +  E +   G    K+     +  +     G      SG ++  NV++  E  +M    
Sbjct: 336 FANPEGLSSEGDNVWKETLSSGNPILGTAGSGGFGTLTSGALESSNVDLSKELVNMIVAQ 395

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y +N QTIK    ++ T ++L
Sbjct: 396 RNYQSNAQTIKTQDQILQTLVNL 418



 Score = 35.6 bits (80), Expect = 2.1,   Method: Composition-based stats.
 Identities = 19/63 (30%), Positives = 26/63 (41%), Gaps = 4/63 (6%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
              A SGL   S+ + +I  NIAN+ T+G   GS  +               GV+V  I
Sbjct: 2  GFSQAVSGLNAASSNLDVIGNNIANSATSGFKAGSVSFA----DMFAGSQTGMGVKVAGI 57

Query: 67 GVD 69
            D
Sbjct: 58 TQD 60


>gi|77359724|ref|YP_339299.1| flagellar basal body rod protein FlgG [Pseudoalteromonas
           haloplanktis TAC125]
 gi|76874635|emb|CAI85856.1| flagellar biosynthesis; cell-distal portion of basal-body rod
           [Pseudoalteromonas haloplanktis TAC125]
          Length = 262

 Score = 51.8 bits (122), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 27/78 (34%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +   G     +  V  +                G ++  NVNV  E  ++ ET 
Sbjct: 179 FINPSGLEPIGQNLYTETAVSGAPVQGNPGVDGLGTIIQGSLETSNVNVTEELVNLIETQ 238

Query: 109 RLYMANLQTIKQSHDMMT 126
           R+Y  N + I    +MM+
Sbjct: 239 RVYEMNSKVISAVDEMMS 256



 Score = 39.9 bits (91), Expect = 0.13,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  +  I+ +GL  Q   + +IS N+ANA T G       +
Sbjct: 1  MNPALWISKTGLDAQQTDISVISNNLANASTVGYKKSRAVF 41


>gi|119469952|ref|ZP_01612757.1| flagellar biosynthesis; cell-distal portion of basal-body rod
           [Alteromonadales bacterium TW-7]
 gi|119446662|gb|EAW27935.1| flagellar biosynthesis; cell-distal portion of basal-body rod
           [Alteromonadales bacterium TW-7]
          Length = 262

 Score = 51.8 bits (122), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 27/78 (34%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +   G     +  V  +                G ++  NVNV  E  ++ ET 
Sbjct: 179 FINPSGLEPVGQNLYTETAVSGAPVQGNPGVEGLGTIIQGSLETSNVNVTEELVNLIETQ 238

Query: 109 RLYMANLQTIKQSHDMMT 126
           R+Y  N + I    +MM+
Sbjct: 239 RIYEMNSKVISAVDEMMS 256



 Score = 39.9 bits (91), Expect = 0.13,   Method: Composition-based stats.
 Identities = 17/102 (16%), Positives = 32/102 (31%), Gaps = 6/102 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +  +  I+ +GL  Q   + +IS N+ANA T G        + + I  + +         
Sbjct: 1   MNPALWISKTGLDAQQTDISVISNNLANASTVG------YKKSRAIFEDLLYQNINQPGG 54

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
           +     +         G  V          N+     + D  
Sbjct: 55  RSSQDTEMPSGLMLGAGAKVVANQKNFSQGNMLTTENSLDWM 96


>gi|149173757|ref|ZP_01852386.1| flagellar hook basal body protein flgG [Planctomyces maris DSM
           8797]
 gi|148847287|gb|EDL61621.1| flagellar hook basal body protein flgG [Planctomyces maris DSM
           8797]
          Length = 266

 Score = 51.8 bits (122), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 20/132 (15%), Positives = 41/132 (31%), Gaps = 7/132 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           L  +  I    + +  +   ++S      +  G T        +   F            
Sbjct: 139 LQPTISIPQDAINITISGDGVVS-----YQQQGSTQIQTAGNIQIARFINNQGLVRQGDN 193

Query: 64  KKIGVDQSTFVEEFDP--GHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
                  S   +  DP          G ++  NV  + E  ++ +T R +  N Q ++ +
Sbjct: 194 LYTETTGSGPSQFGDPGTEGRGQLRQGFLEQSNVEPVRELVELIKTQRNFELNSQVVQAA 253

Query: 122 HDMMTTTLDLLR 133
              + T  +L R
Sbjct: 254 DQTLQTVANLRR 265



 Score = 35.2 bits (79), Expect = 3.1,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 21/40 (52%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          + + + + +G+A  S  + II+ N+AN+ TT        +
Sbjct: 3  VRALYSSATGMAANSFNLDIIANNLANSSTTAYKQSRANF 42


>gi|126738578|ref|ZP_01754283.1| flagellar basal-body rod protein FlgG [Roseobacter sp. SK209-2-6]
 gi|126720377|gb|EBA17083.1| flagellar basal-body rod protein FlgG [Roseobacter sp. SK209-2-6]
          Length = 261

 Score = 51.8 bits (122), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 19/45 (42%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             G ++  +V+ + E  ++ E  R Y  N + I     MM  T  
Sbjct: 215 RQGYLEGSSVDSVREVTELIEAQRGYEMNAKVISAVDQMMGATTQ 259



 Score = 45.2 bits (105), Expect = 0.003,   Method: Composition-based stats.
 Identities = 16/93 (17%), Positives = 30/93 (32%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          + +  IA +G++ Q  R++ IS N+AN  TT        +                    
Sbjct: 1  MRALKIAATGMSAQQLRVETISNNLANMNTTAYNARRAEFADLHYQQVSRAGTINASDGT 60

Query: 65 KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNV 97
           +       +        V    G +K  N ++
Sbjct: 61 VLPTGVQVGLGVRPAAISVHLNQGALKQTNSDL 93


>gi|294013086|ref|YP_003546546.1| flagellar hook protein FlgE [Sphingobium japonicum UT26S]
 gi|292676416|dbj|BAI97934.1| flagellar hook protein FlgE [Sphingobium japonicum UT26S]
          Length = 280

 Score = 51.8 bits (122), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 15/83 (18%), Positives = 37/83 (44%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            + +E +  SG           +  +   + G   +  SG ++  NV++  E  ++    
Sbjct: 196 FNSQEGLRQSGDAHWTATNASGAPMLGTGNSGLFGSIRSGALERSNVDITEELVNLISAQ 255

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R + AN + I+ ++ + TT +++
Sbjct: 256 RNFQANSKAIEAANTLSTTIVNM 278



 Score = 36.4 bits (82), Expect = 1.3,   Method: Composition-based stats.
 Identities = 9/38 (23%), Positives = 16/38 (42%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          S +I+ SGL      +   + N+AN  +T        +
Sbjct: 2  SFYISLSGLKAAQTDLSTTANNVANVNSTAFKKSKAVF 39


>gi|253990127|ref|YP_003041483.1| flagellar hook protein FlgE [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253781577|emb|CAQ84740.1| flagellar hook protein flge [Photorhabdus asymbiotica]
          Length = 404

 Score = 51.8 bits (122), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 18/83 (21%), Positives = 33/83 (39%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +  E +   G     + G   S+ +     G      S  ++  NV++  E  +M    
Sbjct: 321 FANPEGLAAQGDNVWVETGASGSSIIGIAGSGGFGELLSSTLEASNVDMSKELVNMIVAQ 380

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y +N QTIK    ++ T + +
Sbjct: 381 RNYQSNAQTIKTQDQILQTLVSM 403



 Score = 35.6 bits (80), Expect = 2.1,   Method: Composition-based stats.
 Identities = 14/39 (35%), Positives = 19/39 (48%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          +   A SGL   +A + +I  NIANA T G    S  + 
Sbjct: 2  AFSQAVSGLNAAAANLDVIGNNIANAATYGFKSSSAAFA 40


>gi|83647173|ref|YP_435608.1| flagellar hook protein FlgE [Hahella chejuensis KCTC 2396]
 gi|83635216|gb|ABC31183.1| Flagellar hook protein FlgE [Hahella chejuensis KCTC 2396]
          Length = 651

 Score = 51.8 bits (122), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 12/60 (20%), Positives = 26/60 (43%)

Query: 72  TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             +         A  S  ++  NV++  +   +    R Y AN +TI+ ++ +  T ++L
Sbjct: 591 PVIGSPGTASLGAIRSSSLEDSNVDLSEQLVGLIIAQRNYQANAKTIETANAITQTIINL 650



 Score = 34.8 bits (78), Expect = 3.9,   Method: Composition-based stats.
 Identities = 13/66 (19%), Positives = 26/66 (39%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
           +IA +G+   S  +++   NIANA TTG       +     +    +  +      ++ 
Sbjct: 3  FNIALTGIRAASVDLEVTGNNIANASTTGFKRSRAEFGDLYANSFLSLGTNPVGDGVRVQ 62

Query: 68 VDQSTF 73
            +  F
Sbjct: 63 KVRQEF 68


>gi|332558507|ref|ZP_08412829.1| FlgF [Rhodobacter sphaeroides WS8N]
 gi|332276219|gb|EGJ21534.1| FlgF [Rhodobacter sphaeroides WS8N]
          Length = 251

 Score = 51.8 bits (122), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 27/67 (40%)

Query: 67  GVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           G  ++       P        G+++  NVN + E     E  R +  NL+ I  + ++  
Sbjct: 182 GRIRAGGEPLPTPDQRARVLQGVLEGSNVNTMEELVSSIELQRTFELNLRMISSAKELDE 241

Query: 127 TTLDLLR 133
           +   LLR
Sbjct: 242 SGARLLR 248


>gi|303239788|ref|ZP_07326312.1| fagellar hook-basal body protein [Acetivibrio cellulolyticus CD2]
 gi|302592725|gb|EFL62449.1| fagellar hook-basal body protein [Acetivibrio cellulolyticus CD2]
          Length = 259

 Score = 51.8 bits (122), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 21/45 (46%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             G ++  NVNV+ E  +M    R Y +N + I+     +   ++
Sbjct: 209 KQGYLEQSNVNVVNEMINMITVMRAYESNQKVIQALDGTLEKAVN 253



 Score = 36.8 bits (83), Expect = 1.0,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 32/73 (43%), Gaps = 7/73 (9%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR-------RKTISFEEVMH 56
          +I + + +   +   + +M +IS N+AN  T G    +  Y        R+    E  ++
Sbjct: 1  MIRALYTSGWSMNANNKQMDVISNNLANVSTNGYKKDTVVYESFPNALVRRVNDTESTLN 60

Query: 57 GSGGVRVKKIGVD 69
           SG V   ++G D
Sbjct: 61 PSGKVGDVQLGND 73


>gi|331269339|ref|YP_004395831.1| flagellar basal-body rod protein FlgG [Clostridium botulinum
           BKT015925]
 gi|329125889|gb|AEB75834.1| flagellar basal-body rod protein FlgG [Clostridium botulinum
           BKT015925]
          Length = 262

 Score = 51.8 bits (122), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 12/66 (18%), Positives = 26/66 (39%)

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           + + Q     +       +   G  +  NV++  E +D+  T R +  N   +K + +M 
Sbjct: 194 VPLTQGNGRNDVIESKDFSLLQGFTEQSNVDLGKEMSDLIITQRAFQLNSSALKTADEMW 253

Query: 126 TTTLDL 131
               +L
Sbjct: 254 GMANNL 259



 Score = 36.8 bits (83), Expect = 1.1,   Method: Composition-based stats.
 Identities = 11/35 (31%), Positives = 20/35 (57%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDT 38
          ++ S   + SG+A +  ++  IS N+AN+ T G  
Sbjct: 1  MLRSIWNSRSGMAAEMDKLDAISNNMANSTTVGYK 35


>gi|229825259|ref|ZP_04451328.1| hypothetical protein GCWU000182_00612 [Abiotrophia defectiva ATCC
           49176]
 gi|229790631|gb|EEP26745.1| hypothetical protein GCWU000182_00612 [Abiotrophia defectiva ATCC
           49176]
          Length = 258

 Score = 51.4 bits (121), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 22/44 (50%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            G ++  NVN + E  ++    R Y A  + I+ S  +M + ++
Sbjct: 209 QGYIEQSNVNSVREMVNLITITRAYEAGQKMIQSSDSIMESAVN 252



 Score = 33.7 bits (75), Expect = 8.6,   Method: Composition-based stats.
 Identities = 12/33 (36%), Positives = 21/33 (63%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ S + A +G+  +  RM I++ N+ANA T G
Sbjct: 1  MLRSLYTAYTGMVNEQRRMDIMTNNLANATTAG 33


>gi|157959902|ref|YP_001499936.1| flagellar hook protein FlgE [Shewanella pealeana ATCC 700345]
 gi|157844902|gb|ABV85401.1| flagellar basal body FlaE domain protein [Shewanella pealeana ATCC
           700345]
          Length = 402

 Score = 51.4 bits (121), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 10/59 (16%), Positives = 23/59 (38%)

Query: 72  TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             +     G     ++G ++  NV+   E  ++    R Y +N + +  +  M    L+
Sbjct: 342 PIIGTPTTGTLGGLSAGYLEGSNVDQTAEMVNLMTAQRNYQSNAKVLDTNSTMQQALLN 400



 Score = 37.5 bits (85), Expect = 0.62,   Method: Composition-based stats.
 Identities = 15/38 (39%), Positives = 20/38 (52%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          S +IA SGL   +  +  IS NIAN+ T G   G   +
Sbjct: 2  SFNIALSGLQATTQDLNTISNNIANSSTVGFRSGRSEF 39


>gi|94969950|ref|YP_591998.1| flagellar basal-body rod FlgG [Candidatus Koribacter versatilis
           Ellin345]
 gi|94552000|gb|ABF41924.1| Flagellar basal-body rod FlgG [Candidatus Koribacter versatilis
           Ellin345]
          Length = 263

 Score = 51.4 bits (121), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 24/48 (50%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             G+++  NV+V+ E   M    R Y AN + +  +++M+     + R
Sbjct: 216 QQGVLEQANVSVVDEFIQMILAQRSYEANSKVVTAANEMLQNLNTMAR 263



 Score = 40.2 bits (92), Expect = 0.092,   Method: Composition-based stats.
 Identities = 12/91 (13%), Positives = 26/91 (28%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +  + + A +G+  Q   +  I+ N++NA T G       ++        V   +   + 
Sbjct: 1  MFRALYTAATGMTAQQLNLDNIANNLSNASTAGFRARRLQFQDLMYQNMVVPGSAATQQT 60

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIVKYPN 94
                Q            +          N
Sbjct: 61 TVASGLQVGLGTRPTASETLQTQGEFESTGN 91


>gi|304392506|ref|ZP_07374446.1| flagellar basal-body rod protein FlgG [Ahrensia sp. R2A130]
 gi|303295136|gb|EFL89496.1| flagellar basal-body rod protein FlgG [Ahrensia sp. R2A130]
          Length = 262

 Score = 51.4 bits (121), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 18/41 (43%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
             G ++  NV  + E   +    R Y  N + I+ + DM +
Sbjct: 215 RQGYLESSNVESVKEITQLIAAQRGYEMNSKVIQAADDMAS 255



 Score = 44.9 bits (104), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 21/40 (52%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          + +  IA +G+  Q   + +I+ NIAN  TTG   G   +
Sbjct: 1  MRALSIAATGMQAQQKNLDVIAHNIANINTTGFKRGRVEF 40


>gi|114799551|ref|YP_758981.1| flagellar hook protein FlgE [Hyphomonas neptunium ATCC 15444]
 gi|114739725|gb|ABI77850.1| flagellar hook protein FlgE [Hyphomonas neptunium ATCC 15444]
          Length = 434

 Score = 51.4 bits (121), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 22/44 (50%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +     ++  E  D+ ET R Y +N + ++   +M+  T +L R
Sbjct: 391 LMESTTDIASELTDLIETQRAYSSNAKIVQTVDEMLQETTNLKR 434



 Score = 39.1 bits (89), Expect = 0.19,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 31/64 (48%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            + +S +    GL+V   R+  IS+NIAN+ T G    +  +    +  +   + +GGV
Sbjct: 1  MSISSSLNAGVMGLSVNGTRLATISDNIANSGTYGYKRSAVDFSSMVLQQKTSAYAAGGV 60

Query: 62 RVKK 65
          RV  
Sbjct: 61 RVDT 64


>gi|238788315|ref|ZP_04632109.1| Flagellar hook protein FlgE [Yersinia frederiksenii ATCC 33641]
 gi|238723561|gb|EEQ15207.1| Flagellar hook protein FlgE [Yersinia frederiksenii ATCC 33641]
          Length = 428

 Score = 51.4 bits (121), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 34/83 (40%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            S  E +   G    K+     +  +     G      SG ++  NV++  E  +M    
Sbjct: 345 FSNPEGLSPEGDNVWKETKSSGNPILGTAGGGGFGTLTSGALESSNVDLSKELVNMIVAQ 404

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y +N QTIK    ++ T ++L
Sbjct: 405 RNYQSNAQTIKTQDQILQTLVNL 427



 Score = 35.6 bits (80), Expect = 2.6,   Method: Composition-based stats.
 Identities = 19/63 (30%), Positives = 26/63 (41%), Gaps = 4/63 (6%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
              A SGL   S+ + +I  NIAN+ T+G   GS  +               GV+V  I
Sbjct: 2  GFSQAVSGLNAASSNLDVIGNNIANSATSGFKAGSVSFA----DMFAGSQTGMGVKVAGI 57

Query: 67 GVD 69
            D
Sbjct: 58 TQD 60


>gi|146295640|ref|YP_001179411.1| flagellar basal body rod protein [Caldicellulosiruptor
           saccharolyticus DSM 8903]
 gi|145409216|gb|ABP66220.1| flagellar basal body rod protein [Caldicellulosiruptor
           saccharolyticus DSM 8903]
          Length = 257

 Score = 51.4 bits (121), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 19/44 (43%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            G ++  NVN + E  +M    R Y AN +      + +   ++
Sbjct: 209 QGYLEGSNVNSVQEMVNMINVLRAYEANQKAFIAQDETLQKAVN 252



 Score = 34.1 bits (76), Expect = 5.9,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 18/39 (46%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSD 42
          +I   + + SG+ +    M + + NIAN  TTG      
Sbjct: 1  MIRGIYTSASGMILNQKLMDLTANNIANVSTTGFKRDIA 39


>gi|12057219|gb|AAF14371.2|AF133240_5 flagellar proximal rod protein FlgF [Rhodobacter sphaeroides]
          Length = 251

 Score = 51.4 bits (121), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 27/67 (40%)

Query: 67  GVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           G  ++       P        G+++  NVN + E     E  R +  NL+ I  + ++  
Sbjct: 182 GRIRAGGEPLPTPDQRARVLQGVLEGSNVNTMEELVSSIELQRTFELNLRMISSAKELDE 241

Query: 127 TTLDLLR 133
           +   LLR
Sbjct: 242 SGARLLR 248


>gi|301631988|ref|XP_002945073.1| PREDICTED: flagellar basal-body rod protein flgF-like [Xenopus
           (Silurana) tropicalis]
          Length = 430

 Score = 51.4 bits (121), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 20/96 (20%), Positives = 36/96 (37%)

Query: 34  TTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
           + G T         +    + +   G     +        V +   G   A  SG ++  
Sbjct: 104 SNGVTRPEGVVALASFRNTQGLSDIGNNLWVETFESGQPTVGQPTSGSFGALRSGALEDS 163

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
           NV++  E  +M    R Y +N QTIK    +++T +
Sbjct: 164 NVDLTAELVNMMTAQRAYQSNAQTIKTQDQVISTLV 199



 Score = 36.4 bits (82), Expect = 1.3,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 24/64 (37%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          S     SGL   S  + +I  NIAN+ T G       +     S     +G+ G     +
Sbjct: 2  SFQQGLSGLTAASKNLDVIGHNIANSGTVGFKASRTEFDEMVASAIGSANGTNGGIGVGV 61

Query: 67 GVDQ 70
           +D 
Sbjct: 62 KLDD 65



 Score = 35.6 bits (80), Expect = 2.1,   Method: Composition-based stats.
 Identities = 19/104 (18%), Positives = 32/104 (30%), Gaps = 3/104 (2%)

Query: 30  ANARTTGDTPGSDPYRRKTISFEEV-MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASG 88
           A+   T  T G  P     I      +          +    S      DP    A  SG
Sbjct: 325 ADGTLTAQTAGQPPAPVGRIKLATPGLDDPLQRGNDGLFRTASGAPLAQDPNA--ALLSG 382

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
            ++  NVN +     M    R +   ++ ++ +     +   LL
Sbjct: 383 ALEGSNVNAVESMVGMIAAARQFEQQMRLLQTAESGDKSAAQLL 426


>gi|152997582|ref|YP_001342417.1| hypothetical protein Mmwyl1_3580 [Marinomonas sp. MWYL1]
 gi|150838506|gb|ABR72482.1| protein of unknown function DUF1078 domain protein [Marinomonas sp.
           MWYL1]
          Length = 565

 Score = 51.4 bits (121), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 18/105 (17%), Positives = 35/105 (33%), Gaps = 5/105 (4%)

Query: 29  IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANA-- 86
           IAN             +    +F+             +    S   +   P         
Sbjct: 463 IANYTNQQTA---TLGQIALATFDSTDGLMPSGHTMWVATKTSGPADIGRPNSATLGKIA 519

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G ++  NV++  E   + E  R Y AN +T++  + +  T ++L
Sbjct: 520 GGALEESNVDLTAELVALIEAQRNYQANSKTLETENTVTQTIINL 564


>gi|320529447|ref|ZP_08030535.1| putative flagellar hook protein FlgE [Selenomonas artemidis F0399]
 gi|320138413|gb|EFW30307.1| putative flagellar hook protein FlgE [Selenomonas artemidis F0399]
          Length = 681

 Score = 51.4 bits (121), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 27/48 (56%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            +  ++  NV++  + +DM  T R + +N + I  S +M+ T +++ R
Sbjct: 634 TTSALEMSNVDIADQFSDMIITQRGFQSNSKIITVSDEMLETLINMKR 681



 Score = 39.1 bits (89), Expect = 0.20,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 19/57 (33%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          ++ S     SGL     RM +I  NIAN  TTG       +               G
Sbjct: 1  MMRSMFSGVSGLKGHQTRMDVIGNNIANVNTTGFKASRVTFADMISQNLSGASAPQG 57


>gi|292669794|ref|ZP_06603220.1| flagellar hook protein FlgE [Selenomonas noxia ATCC 43541]
 gi|292648591|gb|EFF66563.1| flagellar hook protein FlgE [Selenomonas noxia ATCC 43541]
          Length = 680

 Score = 51.4 bits (121), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 27/48 (56%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            +  ++  NV++  + +DM  T R + +N + I  S +M+ T +++ R
Sbjct: 633 TTSALEMSNVDIADQFSDMIITQRGFQSNSKIITVSDEMLETLINMKR 680



 Score = 39.1 bits (89), Expect = 0.23,   Method: Composition-based stats.
 Identities = 18/95 (18%), Positives = 25/95 (26%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ S     SGL     RM +I  NIAN  TTG       +               G   
Sbjct: 1  MMRSMFSGVSGLKGHQTRMDVIGNNIANVNTTGFKASRVTFADMISQNLSGAASPNGNIG 60

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVL 98
                    +          N S      N ++ 
Sbjct: 61 GVNPKQVGLGMSVASTDLIYTNGSVQQTGKNTDIA 95


>gi|153940763|ref|YP_001391938.1| flagellar basal body rod protein FlgG [Clostridium botulinum F str.
           Langeland]
 gi|152936659|gb|ABS42157.1| flagellar basal body rod protein [Clostridium botulinum F str.
           Langeland]
 gi|295319958|gb|ADG00336.1| flagellar basal body rod protein [Clostridium botulinum F str.
           230613]
          Length = 263

 Score = 51.4 bits (121), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 19/116 (16%), Positives = 41/116 (35%), Gaps = 3/116 (2%)

Query: 21  RMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEE---F 77
           R+   S+N  N    G     D      +  +  ++ + G              +E    
Sbjct: 148 RIGGFSKNNINIAEDGSISVKDIDGMNKMVGKINIYNAVGSDAFVSIGRNLYIPQEGVNV 207

Query: 78  DPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
              + V+   G ++  NV+   E  +M  T R +  + + IK + +M     ++ +
Sbjct: 208 FTNNDVSILQGFLENSNVDAGKEMTEMIITQRAFELSSRGIKTADEMWGIVNNMRK 263



 Score = 40.2 bits (92), Expect = 0.087,   Method: Composition-based stats.
 Identities = 12/61 (19%), Positives = 23/61 (37%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ +   + SGL  Q  ++  IS N+AN  T G       ++       +        R 
Sbjct: 1  MLRALWNSKSGLIAQQNKLDSISNNLANVNTVGYKREDVSFQELVQETLKRKGYPTSDRP 60

Query: 64 K 64
          +
Sbjct: 61 E 61


>gi|149195336|ref|ZP_01872423.1| flagellar hook protein [Caminibacter mediatlanticus TB-2]
 gi|149134528|gb|EDM23017.1| flagellar hook protein [Caminibacter mediatlanticus TB-2]
          Length = 634

 Score = 51.4 bits (121), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 24/44 (54%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  NVN+     ++  T + + A+ +T+  S +M+   ++L R
Sbjct: 591 LETSNVNMSQAMTELIVTQKAFQASAKTVTTSDEMIQKAINLKR 634


>gi|83858806|ref|ZP_00952328.1| flagellar basal-body rod protein FlgG [Oceanicaulis alexandrii
           HTCC2633]
 gi|83853629|gb|EAP91481.1| flagellar basal-body rod protein FlgG [Oceanicaulis alexandrii
           HTCC2633]
          Length = 261

 Score = 51.4 bits (121), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 22/43 (51%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            V+  NV+ + E   + +  R Y  N + I  + +M+ T+ +L
Sbjct: 218 FVEVSNVDAVTEITSLIQAQRAYEMNARVITAADEMLATSSNL 260



 Score = 36.8 bits (83), Expect = 0.91,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 19/40 (47%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          + +   A +G+  QS  +++IS N+AN  T         +
Sbjct: 1  MRALSTAATGMEAQSLAVEVISHNLANMNTIAFKRQRAEF 40


>gi|330830301|ref|YP_004393253.1| flagellar basal body rod protein FlgG [Aeromonas veronii B565]
 gi|328805437|gb|AEB50636.1| Flagellar basal body rod protein FlgG [Aeromonas veronii B565]
          Length = 262

 Score = 51.4 bits (121), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 12/82 (14%), Positives = 26/82 (31%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +   G     +     +                G+++  NVNV  E  ++ +  
Sbjct: 179 FVNASGLQPMGENMFVETQSSGAAAQGTAGADGLGVIKQGMLETSNVNVTEELVNLIQAQ 238

Query: 109 RLYMANLQTIKQSHDMMTTTLD 130
           R+Y  N + +     MM+  + 
Sbjct: 239 RVYEMNSKVLSAVDGMMSFLIQ 260



 Score = 43.3 bits (100), Expect = 0.012,   Method: Composition-based stats.
 Identities = 19/108 (17%), Positives = 35/108 (32%), Gaps = 6/108 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +  +  I+ +GL  Q   + + S N+ANA T G        + + I  + +         
Sbjct: 1   MNPALWISKTGLDAQQTNISVTSNNLANASTVG------FKKSRAIFEDLLYQNINQPGG 54

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
           +     +         G  V          NV     + D+  + R Y
Sbjct: 55  RSSADTELPSGLMLGAGAKVVATQKNHSQGNVQTTDNSLDLMISGRGY 102


>gi|323704840|ref|ZP_08116417.1| flagellar basal-body rod protein FlgF [Thermoanaerobacterium
           xylanolyticum LX-11]
 gi|323535766|gb|EGB25540.1| flagellar basal-body rod protein FlgF [Thermoanaerobacterium
           xylanolyticum LX-11]
          Length = 248

 Score = 51.4 bits (121), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 21/45 (46%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             G ++  NVN + E   M    R Y AN +++    + +  +++
Sbjct: 199 KQGYLEGSNVNPVDEMVTMISAMRTYEANQKSVSAFDETLDKSVN 243



 Score = 39.5 bits (90), Expect = 0.17,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 23/67 (34%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++   + A+SG+  Q   + ++S NIAN  T G    +               G      
Sbjct: 1  MLRGLYTASSGMIAQQKIVDVLSNNIANVNTAGYKKDTVTTMAFPDYMVTRNGGDNVPYN 60

Query: 64 KKIGVDQ 70
            IG   
Sbjct: 61 GNIGTMD 67


>gi|313673204|ref|YP_004051315.1| fagellar hook-basal body protein [Calditerrivibrio nitroreducens
           DSM 19672]
 gi|312939960|gb|ADR19152.1| fagellar hook-basal body protein [Calditerrivibrio nitroreducens
           DSM 19672]
          Length = 206

 Score = 51.4 bits (121), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 25/53 (47%)

Query: 79  PGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           P       SG ++  NV++  E  +     R   AN++T+K   +M+   +++
Sbjct: 152 PDSNYEILSGFLEASNVDIAKEMVESITNFRYIQANVKTVKTVDEMLGNIVNI 204


>gi|302878276|ref|YP_003846840.1| fagellar hook-basal body protein [Gallionella capsiferriformans
           ES-2]
 gi|302581065|gb|ADL55076.1| fagellar hook-basal body protein [Gallionella capsiferriformans
           ES-2]
          Length = 498

 Score = 51.4 bits (121), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 16/83 (19%), Positives = 27/83 (32%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
               + +   G     +     S               +   +  NV++  E  +M    
Sbjct: 415 FINPQGLQPVGNNEWVETSASGSPTTGTPGSSSLGMLQASATEDSNVDLTAELVNMITAQ 474

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R+Y AN QTIK    ++ T   L
Sbjct: 475 RVYQANAQTIKTQDSLLQTITSL 497


>gi|238755324|ref|ZP_04616667.1| Flagellar hook protein FlgE [Yersinia ruckeri ATCC 29473]
 gi|238706460|gb|EEP98834.1| Flagellar hook protein FlgE [Yersinia ruckeri ATCC 29473]
          Length = 427

 Score = 51.4 bits (121), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 35/83 (42%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +  E +   G    K+ G   +  +     G      SG ++  NV++  E  +M    
Sbjct: 344 FANPEGLSPQGDNVWKETGSSGAAIIGTAGGGGFGTLTSGALESSNVDLSKELVNMIVAQ 403

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y +N QTIK    ++ T ++L
Sbjct: 404 RNYQSNAQTIKTQDQILQTLVNL 426



 Score = 37.2 bits (84), Expect = 0.75,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 34/104 (32%), Gaps = 8/104 (7%)

Query: 7   SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
               A SGL   S+ + +I  NIAN+ T+G   GS  +               GV+V  I
Sbjct: 2   GFSQAVSGLNAASSNLDVIGNNIANSATSGFKSGSVSFA----DMFAGSQTGMGVKVAGI 57

Query: 67  GVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRL 110
             D +       P          +       L +++      R 
Sbjct: 58  TQDFNDG----TPTTTNRRLDLAISQSGFFRLEDSSGGISYARN 97


>gi|169831888|ref|YP_001717870.1| flagellar basal body rod protein [Candidatus Desulforudis
           audaxviator MP104C]
 gi|169638732|gb|ACA60238.1| flagellar basal body rod protein [Candidatus Desulforudis
           audaxviator MP104C]
          Length = 246

 Score = 51.4 bits (121), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 23/44 (52%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            G ++  NV++ VE  D+   +RLY AN +  +    ++   ++
Sbjct: 197 QGYLEGSNVHLAVELVDLLLASRLYAANQRVARTQDTLVEKAIN 240



 Score = 45.2 bits (105), Expect = 0.003,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 7/63 (11%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I   + A SG+     R+  ++ NIAN  TTG       +RR+   F   +  + G   
Sbjct: 1  MIRGVYTAASGMLAGQTRLDAVAHNIANVNTTG-------FRRQVPVFAPYLQTAVGRHE 53

Query: 64 KKI 66
          K++
Sbjct: 54 KRV 56


>gi|260768782|ref|ZP_05877716.1| flagellar hook protein FlgE [Vibrio furnissii CIP 102972]
 gi|260616812|gb|EEX41997.1| flagellar hook protein FlgE [Vibrio furnissii CIP 102972]
          Length = 397

 Score = 51.4 bits (121), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 25/59 (42%)

Query: 72  TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
                   G     ASG+++  NV++  E   +    R Y AN +TI  +  +M +  +
Sbjct: 337 PVYGIPGSGQFGELASGVLEGSNVDLTSELVHLMSAQRNYQANTKTITTADQLMMSLFN 395



 Score = 40.6 bits (93), Expect = 0.068,   Method: Composition-based stats.
 Identities = 24/104 (23%), Positives = 33/104 (31%), Gaps = 8/104 (7%)

Query: 7   SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
           S +IA SGL   +  +  IS NIAN  TTG         R           +GGV+V  I
Sbjct: 2   SFNIALSGLNASNQELNTISNNIANVSTTGFKE-----SRTEFGSVYNGQQAGGVQVMGI 56

Query: 67  GVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRL 110
                 F           +    +      V+ +        R 
Sbjct: 57  SQ---NFEATGSMSATGRSLDMALTGSGFFVVQDKNGQLSYTRS 97


>gi|34558065|ref|NP_907880.1| flagellar hook protein FlgE [Wolinella succinogenes DSM 1740]
 gi|34483783|emb|CAE10780.1| FLAGELLAR HOOK PROTEIN [Wolinella succinogenes]
          Length = 716

 Score = 51.4 bits (121), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 13/79 (16%), Positives = 27/79 (34%)

Query: 55  MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
           +   G     +        V     G     +   ++  NV++      +    R + AN
Sbjct: 638 LQAEGSNLFSQTANSGEPVVGTAGSGGRGKISPSALEMSNVDLSRSLTQLIVVQRGFQAN 697

Query: 115 LQTIKQSHDMMTTTLDLLR 133
            +T+  S  ++ T L L +
Sbjct: 698 SKTVTTSDQILNTLLQLKQ 716



 Score = 36.8 bits (83), Expect = 1.1,   Method: Composition-based stats.
 Identities = 10/33 (30%), Positives = 15/33 (45%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ S     SG+      + +   NIAN  TTG
Sbjct: 1  MLRSLWSGVSGMQAHQVALDVEGNNIANVNTTG 33


>gi|152975165|ref|YP_001374682.1| flagellar hook protein FlgE [Bacillus cereus subsp. cytotoxis NVH
           391-98]
 gi|152023917|gb|ABS21687.1| protein of unknown function DUF1078 domain protein [Bacillus
           cytotoxicus NVH 391-98]
          Length = 467

 Score = 51.4 bits (121), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 17/86 (19%), Positives = 33/86 (38%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
           T   ++ +   G             F+   +         G  +  NV++ VE  D+   
Sbjct: 382 TFKNQDGLMKVGNGNYVPTASAGDPFIGVAEQNGAGKIIGGAQEGSNVDLSVEFVDLMLY 441

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R +  N + IK S D++   ++L+R
Sbjct: 442 QRGFQGNAKVIKVSDDVLNEVVNLIR 467



 Score = 40.6 bits (93), Expect = 0.078,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 21/41 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I S + + SG++     + + S NIANA+T G       +
Sbjct: 1  MIKSLYTSISGMSAMQNALSVTSNNIANAQTVGYKKQKAVF 41


>gi|146294550|ref|YP_001184974.1| flagellar hook protein FlgE [Shewanella putrefaciens CN-32]
 gi|145566240|gb|ABP77175.1| flagellar basal body FlaE domain protein [Shewanella putrefaciens
           CN-32]
          Length = 395

 Score = 51.4 bits (121), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 18/42 (42%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            ++  NV+   E  ++    R Y +N + +  +  M    L+
Sbjct: 352 YLEGSNVDTTAEMVNLMSAQRNYQSNAKVLDVNSTMQQALLN 393



 Score = 40.6 bits (93), Expect = 0.073,   Method: Composition-based stats.
 Identities = 16/39 (41%), Positives = 20/39 (51%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          S +IA SGL   +  +  IS NIANA T G   G   + 
Sbjct: 2  SFNIALSGLQATTQDLNTISNNIANASTNGFRGGRSEFA 40


>gi|295697724|ref|YP_003590962.1| fagellar hook-basal body protein [Bacillus tusciae DSM 2912]
 gi|295413326|gb|ADG07818.1| fagellar hook-basal body protein [Bacillus tusciae DSM 2912]
          Length = 273

 Score = 51.4 bits (121), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 18/47 (38%)

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
               G ++  NV+       M +  R Y AN + I+     M   ++
Sbjct: 220 QVRQGFLEQSNVDPGQTMVQMIDVVRAYEANQKVIRTVDQSMDKLVN 266



 Score = 44.1 bits (102), Expect = 0.006,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 20/39 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSD 42
          +I   +IA SG+  Q  R +I++ N+ NA T G      
Sbjct: 1  MIRGLYIAASGMIAQQRREEIVANNLVNASTPGYKQDEP 39


>gi|157364671|ref|YP_001471438.1| hypothetical protein Tlet_1820 [Thermotoga lettingae TMO]
 gi|157315275|gb|ABV34374.1| protein of unknown function DUF1078 domain protein [Thermotoga
           lettingae TMO]
          Length = 631

 Score = 51.4 bits (121), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 21/47 (44%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NV++  E   M    R + AN + I  +  ++   + L R
Sbjct: 585 PGALEMSNVDLAEEFTRMIIAQRGFQANARVITTADTILGELVALRR 631


>gi|312621331|ref|YP_004022944.1| fagellar hook-basal body protein [Caldicellulosiruptor
           kronotskyensis 2002]
 gi|312201798|gb|ADQ45125.1| fagellar hook-basal body protein [Caldicellulosiruptor
           kronotskyensis 2002]
          Length = 255

 Score = 51.4 bits (121), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 19/44 (43%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            G ++  NVN + E  +M    R Y AN +      + +   ++
Sbjct: 207 QGYLEGSNVNSVQEMVNMINVLRAYEANQKAFVIQDETLQKAVN 250



 Score = 34.1 bits (76), Expect = 7.2,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 30/81 (37%), Gaps = 12/81 (14%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSD------------PYRRKTISF 51
          +I   + + SG+ +    M + + N+AN  TTG                   Y + T   
Sbjct: 1  MIRGIYTSASGMILNQKLMDLTANNVANVSTTGFKRDVAQIESFRNMLVYRIYDKVTSPD 60

Query: 52 EEVMHGSGGVRVKKIGVDQST 72
            + + S G  V +I  D S 
Sbjct: 61 NAIGYMSLGADVSRIVSDFSQ 81


>gi|317051681|ref|YP_004112797.1| flagellar hook-basal body protein [Desulfurispirillum indicum S5]
 gi|316946765|gb|ADU66241.1| flagellar hook-basal body protein [Desulfurispirillum indicum S5]
          Length = 1341

 Score = 51.4 bits (121), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 22/44 (50%)

Query: 90   VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NV++ +E   M    R + AN + I  S  M+   L++ R
Sbjct: 1298 LEMSNVDLSMEFTQMIIVERGFQANSRIISTSDSMIQEVLNMKR 1341


>gi|218461124|ref|ZP_03501215.1| flagellar hook protein FlgE [Rhizobium etli Kim 5]
          Length = 91

 Score = 51.4 bits (121), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 31/82 (37%)

Query: 52  EEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
            + +    G      G    T              SG ++  NV++  E  +M E+ R Y
Sbjct: 10  PDKLTLMSGNVYSANGQSGVTVTGFPQTNGLGTIKSGALEGSNVDLAGELTEMIESQRSY 69

Query: 112 MANLQTIKQSHDMMTTTLDLLR 133
            AN +  +   D+M   ++L R
Sbjct: 70  TANSKVFQTGSDIMDVLVNLKR 91


>gi|157147102|ref|YP_001454421.1| hypothetical protein CKO_02879 [Citrobacter koseri ATCC BAA-895]
 gi|157084307|gb|ABV13985.1| hypothetical protein CKO_02879 [Citrobacter koseri ATCC BAA-895]
          Length = 396

 Score = 51.4 bits (121), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 14/82 (17%), Positives = 27/82 (32%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +    +    G    +     +        G   +  SG ++  NV++  E   +    
Sbjct: 313 FANPNGLASKDGTTWVQTASSGAPLTGTPGTGLLGSVKSGALESSNVDLTSELVGLMTAQ 372

Query: 109 RLYMANLQTIKQSHDMMTTTLD 130
           R Y AN + I  + +MM     
Sbjct: 373 RNYQANTKVISTNDNMMNALFQ 394



 Score = 38.3 bits (87), Expect = 0.33,   Method: Composition-based stats.
 Identities = 15/38 (39%), Positives = 21/38 (55%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          S +IA SGL   + ++  IS NIAN+ T G   G   +
Sbjct: 2  SFNIATSGLNAITEQLNAISNNIANSGTVGFKSGRAEF 39


>gi|28211309|ref|NP_782253.1| flagellar basal body rod protein FlgG [Clostridium tetani E88]
 gi|28203749|gb|AAO36190.1| flagellar basal-body rod protein flgG [Clostridium tetani E88]
          Length = 285

 Score = 51.4 bits (121), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 17/92 (18%), Positives = 36/92 (39%), Gaps = 1/92 (1%)

Query: 41  SDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANA-SGIVKYPNVNVLV 99
            D  + + I    V    G      +  +    V+  +P    ++   G V+  NV +  
Sbjct: 191 KDAKKPRLIGKINVYDAVGENAFISVSDNLYKPVQGVNPEAVNSDVLQGYVERSNVRMEK 250

Query: 100 ETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           E +DM  + R +  + + +K + +M     +L
Sbjct: 251 EMSDMIVSQRAFEFSSRAVKAADEMWGMINNL 282



 Score = 39.5 bits (90), Expect = 0.17,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 17/42 (40%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++       S +  Q  ++  IS NIAN  T G       ++
Sbjct: 1  MLRVLWSGRSAMYAQQEKLDAISNNIANVNTEGYKRQDVSFQ 42


>gi|315180485|gb|ADT87399.1| flagellar hook protein E [Vibrio furnissii NCTC 11218]
          Length = 397

 Score = 51.4 bits (121), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 25/59 (42%)

Query: 72  TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
                   G     ASG+++  NV++  E   +    R Y AN +TI  +  +M +  +
Sbjct: 337 PVYGIPGSGQFGELASGVLEGSNVDLTSELVHLMSAQRNYQANTKTITTADQLMMSLFN 395



 Score = 40.6 bits (93), Expect = 0.072,   Method: Composition-based stats.
 Identities = 24/104 (23%), Positives = 33/104 (31%), Gaps = 8/104 (7%)

Query: 7   SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
           S +IA SGL   +  +  IS NIAN  TTG         R           +GGV+V  I
Sbjct: 2   SFNIALSGLNASNQELNTISNNIANVSTTGFKE-----SRTEFGSVYNGQQAGGVQVMGI 56

Query: 67  GVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRL 110
                 F           +    +      V+ +        R 
Sbjct: 57  SQ---NFEATGSMSATGRSLDMALTGSGFFVVQDKNGQLSYTRS 97


>gi|160878401|ref|YP_001557369.1| flagellar basal body rod protein [Clostridium phytofermentans ISDg]
 gi|160427067|gb|ABX40630.1| flagellar basal body rod protein [Clostridium phytofermentans ISDg]
          Length = 257

 Score = 51.4 bits (121), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 20/49 (40%), Gaps = 1/49 (2%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT-TTLDLLR 133
             G  +  NVNV+ E  +M    R Y AN + ++     +      + +
Sbjct: 208 RQGYTEQSNVNVVSEMVNMIAITRAYEANQKVLQSIDGTLELAANSIGK 256



 Score = 35.2 bits (79), Expect = 3.4,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 19/38 (50%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGS 41
          ++   +   +G+  +  R+ IIS N+AN+ T G     
Sbjct: 1  MVRGLYTGWTGMENEQKRLDIISNNLANSATVGYKKEG 38


>gi|167467491|ref|ZP_02332195.1| flagellar hook protein FlgE [Yersinia pestis FV-1]
          Length = 314

 Score = 51.4 bits (121), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 33/83 (39%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            S  E +   G    K+     +  +     G      SG ++  NV++  E  +M    
Sbjct: 231 FSNPEGLSSEGDNVWKETQSSGNPTLGTAGSGGFGTLTSGALESSNVDLSKELVNMIVAQ 290

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y +N QTIK    ++ T + L
Sbjct: 291 RNYQSNAQTIKTQDQILQTLVSL 313


>gi|153834474|ref|ZP_01987141.1| FlgE [Vibrio harveyi HY01]
 gi|156973586|ref|YP_001444493.1| flagellar hook protein FlgE [Vibrio harveyi ATCC BAA-1116]
 gi|148869170|gb|EDL68202.1| FlgE [Vibrio harveyi HY01]
 gi|156525180|gb|ABU70266.1| hypothetical protein VIBHAR_01289 [Vibrio harveyi ATCC BAA-1116]
          Length = 437

 Score = 51.4 bits (121), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 13/84 (15%), Positives = 33/84 (39%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
            +  E+ +   GG +             E + G      +G+++  N+++  E  D+   
Sbjct: 353 RVPNEQGLDKKGGTQWDSTQFSGDKIWGESNKGSFGTINNGMLEQSNIDMTQELVDLISA 412

Query: 108 NRLYMANLQTIKQSHDMMTTTLDL 131
            R + AN + ++  + +    L +
Sbjct: 413 QRNFQANSRALEVHNQLQQNILQI 436



 Score = 35.6 bits (80), Expect = 2.2,   Method: Composition-based stats.
 Identities = 11/35 (31%), Positives = 16/35 (45%)

Query: 10 IANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          ++ SGL+     +   S NIANA T G       +
Sbjct: 4  VSLSGLSSAQLDLNTTSNNIANANTYGFKESRAEF 38


>gi|78485810|ref|YP_391735.1| hypothetical protein Tcr_1469 [Thiomicrospira crunogena XCL-2]
 gi|78364096|gb|ABB42061.1| Flagellar basal-body rod protein FlgG [Thiomicrospira crunogena
           XCL-2]
          Length = 263

 Score = 51.4 bits (121), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 16/83 (19%), Positives = 29/83 (34%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
           T      +  +G     +     +  V+  +     +   G ++  NVN + E   M E 
Sbjct: 179 TFINPAGLEATGKNFYIETLASGAPNVKNPEIEEAGSLLQGALESSNVNTVEELIGMIEA 238

Query: 108 NRLYMANLQTIKQSHDMMTTTLD 130
            R Y  N + I  +  MM    +
Sbjct: 239 QRTYEMNSKAISAADGMMQYLNN 261



 Score = 41.0 bits (94), Expect = 0.051,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 21/41 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  + ++A +GL  Q  R+  IS N+ANA T     G   +
Sbjct: 1  MNRALYVAKTGLEAQDFRLATISNNLANANTYAYKTGRAEF 41


>gi|120597305|ref|YP_961879.1| flagellar hook protein FlgE [Shewanella sp. W3-18-1]
 gi|120557398|gb|ABM23325.1| flagellar basal body FlaE domain protein [Shewanella sp. W3-18-1]
          Length = 395

 Score = 51.4 bits (121), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 18/42 (42%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            ++  NV+   E  ++    R Y +N + +  +  M    L+
Sbjct: 352 YLEGSNVDTTAEMVNLMSAQRNYQSNAKVLDVNSTMQQALLN 393



 Score = 40.6 bits (93), Expect = 0.076,   Method: Composition-based stats.
 Identities = 16/39 (41%), Positives = 20/39 (51%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          S +IA SGL   +  +  IS NIANA T G   G   + 
Sbjct: 2  SFNIALSGLQATTQDLNTISNNIANASTNGFRGGRSEFA 40


>gi|300817268|ref|ZP_07097486.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 107-1]
 gi|300530244|gb|EFK51306.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 107-1]
          Length = 261

 Score = 51.4 bits (121), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 10/78 (12%), Positives = 22/78 (28%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +    +   G     +                        ++  NV+++ E   M    
Sbjct: 178 FANPAGLSAEGDNLYLETAASGQPTEGVPGEDGLGTLQDNALEGSNVDIVNEMVAMITVQ 237

Query: 109 RLYMANLQTIKQSHDMMT 126
           R Y  N + +  + DM+ 
Sbjct: 238 RAYEMNAKMVSAADDMLQ 255



 Score = 36.4 bits (82), Expect = 1.5,   Method: Composition-based stats.
 Identities = 14/42 (33%), Positives = 22/42 (52%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          + A+   + +GL+ Q A M  I+ NIAN  TTG       ++
Sbjct: 1  MNAALWFSKTGLSAQDAEMSAIANNIANVNTTGFKRDRVMFQ 42


>gi|269961599|ref|ZP_06175961.1| flagellar hook protein [Vibrio harveyi 1DA3]
 gi|269833640|gb|EEZ87737.1| flagellar hook protein [Vibrio harveyi 1DA3]
          Length = 437

 Score = 51.4 bits (121), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 13/84 (15%), Positives = 33/84 (39%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
            +  E+ +   GG +             E + G      +G+++  N+++  E  D+   
Sbjct: 353 RVPNEQGLDKKGGTQWDSTQFSGDKIWGESNKGSFGTINNGMLEQSNIDMTQELVDLISA 412

Query: 108 NRLYMANLQTIKQSHDMMTTTLDL 131
            R + AN + ++  + +    L +
Sbjct: 413 QRNFQANSRALEVHNQLQQNILQI 436



 Score = 35.6 bits (80), Expect = 2.2,   Method: Composition-based stats.
 Identities = 11/35 (31%), Positives = 16/35 (45%)

Query: 10 IANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          ++ SGL+     +   S NIANA T G       +
Sbjct: 4  VSLSGLSSAQLDLNTTSNNIANANTYGFKESRAEF 38


>gi|146277706|ref|YP_001167865.1| flagellar basal-body rod protein FlgG [Rhodobacter sphaeroides ATCC
           17025]
 gi|145555947|gb|ABP70560.1| flagellar basal-body rod protein FlgG [Rhodobacter sphaeroides ATCC
           17025]
          Length = 262

 Score = 51.4 bits (121), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 17/44 (38%), Positives = 24/44 (54%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            G ++  NVNV+ E  DM ET R Y  N ++I  S +MM    +
Sbjct: 217 QGALESSNVNVVQELVDMIETQRAYEVNSKSISASDEMMQYLAN 260



 Score = 44.9 bits (104), Expect = 0.004,   Method: Composition-based stats.
 Identities = 16/40 (40%), Positives = 22/40 (55%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
            + H+A +GL  Q  RMQ+IS N+AN  TTG       +
Sbjct: 3  TNAMHVAKTGLNAQQTRMQVISNNLANVNTTGFKRDRANF 42


>gi|322806967|emb|CBZ04537.1| flagellar basal-body rod protein FlgG [Clostridium botulinum H04402
           065]
          Length = 263

 Score = 51.4 bits (121), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 19/116 (16%), Positives = 41/116 (35%), Gaps = 3/116 (2%)

Query: 21  RMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEE---F 77
           R+   S+N  N    G     D      +  +  ++ + G              +E    
Sbjct: 148 RIGGFSKNNINIAEDGSISVKDIDGINKMVGKINIYNAVGSDAFVSIGRNLYIPQEGVNV 207

Query: 78  DPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
              + V+   G ++  NV+   E  +M  T R +  + + IK + +M     ++ +
Sbjct: 208 FTNNDVSILQGFLENSNVDAGKEMTEMIITQRAFELSSRGIKTADEMWGIVNNMRK 263



 Score = 40.6 bits (93), Expect = 0.081,   Method: Composition-based stats.
 Identities = 12/61 (19%), Positives = 23/61 (37%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ +   + SGL  Q  ++  IS N+AN  T G       ++       +        R 
Sbjct: 1  MLRALWNSKSGLIAQQNKLDSISNNLANVNTVGYKREDVSFQELVQETLKRKGYPTSDRP 60

Query: 64 K 64
          +
Sbjct: 61 E 61


>gi|332296627|ref|YP_004438550.1| flagellar hook-basal body protein [Thermodesulfobium narugense DSM
           14796]
 gi|332179730|gb|AEE15419.1| flagellar hook-basal body protein [Thermodesulfobium narugense DSM
           14796]
          Length = 559

 Score = 51.4 bits (121), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 21/46 (45%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
              ++  NV++  +  ++  T R Y AN + I  S  M+   L L 
Sbjct: 511 PSALEMSNVDLSQQFTNLITTERGYEANARVITTSDQMLQDLLSLK 556



 Score = 35.6 bits (80), Expect = 2.6,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 19/43 (44%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR 46
          ++ +   A SGL      M +I  NIAN  T G    +  + +
Sbjct: 1  MLRAMSSAVSGLQNNQTAMDVIGNNIANVNTIGFKASTVTFSQ 43


>gi|227820875|ref|YP_002824845.1| flagellar hook protein FlgE [Sinorhizobium fredii NGR234]
 gi|227339874|gb|ACP24092.1| putative flagellar hook protein FlgE [Sinorhizobium fredii NGR234]
          Length = 404

 Score = 51.4 bits (121), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 23/44 (52%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  NV++  E   M E+ R Y AN +  +   +++   ++L R
Sbjct: 361 LESSNVDIADELTSMIESQRNYTANSKVFQTGSELLEVLVNLKR 404



 Score = 46.0 bits (107), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 28/64 (43%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            L  +     SG+  Q+ R+  ++ENIAN+ TTG    S  +    +      + SGGV
Sbjct: 1  MSLYGTMRTGVSGMNAQANRLSTVAENIANSSTTGYKRASTEFSSMILPSSNGSYNSGGV 60

Query: 62 RVKK 65
              
Sbjct: 61 ETSV 64


>gi|251799753|ref|YP_003014484.1| flagellar basal body rod protein [Paenibacillus sp. JDR-2]
 gi|247547379|gb|ACT04398.1| flagellar basal body rod protein [Paenibacillus sp. JDR-2]
          Length = 288

 Score = 51.4 bits (121), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 21/49 (42%)

Query: 82  PVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            V    G V+  NV+    + D+    R Y AN + I+   + +   ++
Sbjct: 235 RVEVRQGYVERSNVDAAQSSVDLMAALRAYEANQKVIQFYDESLDKAVN 283


>gi|329888226|ref|ZP_08266824.1| flagellar basal-body rod protein FlgG [Brevundimonas diminuta ATCC
           11568]
 gi|328846782|gb|EGF96344.1| flagellar basal-body rod protein FlgG [Brevundimonas diminuta ATCC
           11568]
          Length = 262

 Score = 51.4 bits (121), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 8/44 (18%), Positives = 19/44 (43%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
             +  NV+ + E   +    R Y  N + I  + +M++ +  + 
Sbjct: 218 YTEASNVDAVSEITALIVAQRAYEMNSKVITTADEMLSVSAQVK 261



 Score = 41.8 bits (96), Expect = 0.033,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 25/62 (40%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          + +   A +G+A Q   +++IS NIAN  T G       ++       E M      +  
Sbjct: 1  MRALRTAATGMAAQQLNVEVISNNIANMNTVGFKRQRAEFQDLLYQNVERMGAQSSSQGT 60

Query: 65 KI 66
           +
Sbjct: 61 VV 62


>gi|283780136|ref|YP_003370891.1| flagellar basal body rod protein [Pirellula staleyi DSM 6068]
 gi|283438589|gb|ADB17031.1| flagellar basal body rod protein [Pirellula staleyi DSM 6068]
          Length = 250

 Score = 51.4 bits (121), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 23/52 (44%)

Query: 79  PGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           P       SG ++   VN + E  +M  ++R Y  N++ I+    M  + + 
Sbjct: 194 PAELRDVRSGSLELSTVNPMQEMVEMIASSRAYENNIKMIQHHDGMTGSLVS 245



 Score = 37.5 bits (85), Expect = 0.65,   Method: Composition-based stats.
 Identities = 13/71 (18%), Positives = 28/71 (39%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +    +I+ +G   Q+ ++++I+ N+AN  T+G       +  +     E  +   G R 
Sbjct: 1  MYYGLYISAAGAYAQNQKVEMITNNLANVDTSGFKKELGIFEARQSEAIERGYEQPGTRG 60

Query: 64 KKIGVDQSTFV 74
                   F 
Sbjct: 61 VSDIGGGVEFK 71


>gi|258514025|ref|YP_003190247.1| flagellar basal-body rod protein FlgF [Desulfotomaculum acetoxidans
           DSM 771]
 gi|257777730|gb|ACV61624.1| flagellar basal-body rod protein FlgF [Desulfotomaculum acetoxidans
           DSM 771]
          Length = 255

 Score = 51.4 bits (121), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 7/45 (15%), Positives = 22/45 (48%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             G ++  NV ++ E  D+   +R Y  + + ++   +++   ++
Sbjct: 205 KQGFLEKSNVELVNEMTDIIAVSRAYETSQKLMQVQDELLGKAVN 249



 Score = 36.4 bits (82), Expect = 1.2,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 18/39 (46%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSD 42
          +I   +   +G+ V   +M +++ N+AN  T G      
Sbjct: 1  MIRGIYSGAAGMNVLQEKMNVMANNLANVNTNGFKMDQA 39


>gi|308183223|ref|YP_003927350.1| flagellar hook-associated protein FlgK [Helicobacter pylori PeCan4]
 gi|308065408|gb|ADO07300.1| flagellar hook-associated protein FlgK [Helicobacter pylori PeCan4]
          Length = 606

 Score = 51.4 bits (121), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 21/122 (17%), Positives = 35/122 (28%), Gaps = 4/122 (3%)

Query: 16  AVQSARMQIISEN--IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTF 73
                 +  I+ N  +AN          D Y  K       +         KI  D    
Sbjct: 485 TAIRPWLAPINGNFDVANMMQQLQYDSVDFYNDKFDIKPMKISEFYQFLTGKINTDAEKS 544

Query: 74  VEEFDPGHPV--ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
               D    +        +    V+V  E  ++ +    Y AN + I     M+ T L +
Sbjct: 545 GRILDTKKSMLETIKKEQLSISQVSVDEEMVNLIKFQSGYAANAKVITAIDRMIDTLLGI 604

Query: 132 LR 133
            +
Sbjct: 605 KQ 606



 Score = 44.5 bits (103), Expect = 0.004,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 40/111 (36%), Gaps = 9/111 (8%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M  +++S + + +GL    + + +   NI+NA         + Y R+ +  +       G
Sbjct: 1   MGGILSSLNTSYTGLQAHQSMVDVTGNNISNASD-------EFYSRQRVIAKPQAAYMYG 53

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
            +   +GVD        D            +  N     E + ++E +  +
Sbjct: 54  TKNVNMGVDVEAIERVHDEFVFARYTKANYE--NTYYDTEFSHLKEASAYF 102


>gi|260767769|ref|ZP_05876704.1| flagellar hook protein FlgE [Vibrio furnissii CIP 102972]
 gi|260617278|gb|EEX42462.1| flagellar hook protein FlgE [Vibrio furnissii CIP 102972]
 gi|315179399|gb|ADT86313.1| flagellar hook protein FlgE [Vibrio furnissii NCTC 11218]
          Length = 434

 Score = 51.4 bits (121), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 13/84 (15%), Positives = 32/84 (38%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
            +  E+ +   GG +             E + G      +G ++  N+++  E  D+   
Sbjct: 350 RVPNEQGLDKKGGTQWDSTQFSGDKIWGESNKGSFGTINNGTLEQSNIDMTQELVDLISA 409

Query: 108 NRLYMANLQTIKQSHDMMTTTLDL 131
            R + AN + ++  + +    L +
Sbjct: 410 QRNFQANSRALEVHNQLQQNILQI 433



 Score = 39.1 bits (89), Expect = 0.23,   Method: Composition-based stats.
 Identities = 11/35 (31%), Positives = 16/35 (45%)

Query: 10 IANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          ++ SGL+     +   S NIANA T G       +
Sbjct: 4  VSLSGLSAAQLDLNTTSNNIANANTFGFKESRAEF 38


>gi|313896037|ref|ZP_07829591.1| putative flagellar hook protein FlgE [Selenomonas sp. oral taxon
           137 str. F0430]
 gi|312975462|gb|EFR40923.1| putative flagellar hook protein FlgE [Selenomonas sp. oral taxon
           137 str. F0430]
          Length = 676

 Score = 51.4 bits (121), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 27/48 (56%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            +  ++  NV++  + +DM  T R + +N + I  S +M+ T +++ R
Sbjct: 629 TTSALEMSNVDIADQFSDMIITQRGFQSNSKIITVSDEMLETLINMKR 676



 Score = 39.1 bits (89), Expect = 0.23,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 19/57 (33%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          ++ S     SGL     RM +I  NIAN  TTG       +               G
Sbjct: 1  MMRSMFSGVSGLKGHQTRMDVIGNNIANVNTTGFKASRVTFADMISQNLSGASAPQG 57


>gi|332298237|ref|YP_004440159.1| flagellar hook-basal body protein [Treponema brennaborense DSM
           12168]
 gi|332181340|gb|AEE17028.1| flagellar hook-basal body protein [Treponema brennaborense DSM
           12168]
          Length = 463

 Score = 51.4 bits (121), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 29/50 (58%)

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  +G ++  NV++  +  DM  T R + A+ +TI+ +  ++ T ++L R
Sbjct: 414 SMLAGSLEMSNVDLTEQFTDMIVTQRGFQASSKTIQTADTLLDTVMNLKR 463



 Score = 38.3 bits (87), Expect = 0.34,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 21/42 (50%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S +   SG+     R+ +I  N+AN  TTG   G   ++
Sbjct: 1  MMRSLYSGVSGMQNHQTRLDVIGNNVANVNTTGFKRGRVNFQ 42


>gi|256829395|ref|YP_003158123.1| hypothetical protein Dbac_1614 [Desulfomicrobium baculatum DSM
           4028]
 gi|256578571|gb|ACU89707.1| protein of unknown function DUF1078 domain protein
           [Desulfomicrobium baculatum DSM 4028]
          Length = 513

 Score = 51.4 bits (121), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 16/100 (16%), Positives = 34/100 (34%)

Query: 34  TTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
           + G   G            + +   GG          +  V     G   +  +  ++  
Sbjct: 414 SNGQNQGLYKIPMADFINPQGLFREGGNLFSATKDSGAVSVGWAGEGRLGSVITSSLENS 473

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           NV++  E  +M  T + + AN + I     ++ T + + R
Sbjct: 474 NVDLATEFVNMIITQKGFDANSKVITTGDQVVQTAIQMKR 513



 Score = 37.5 bits (85), Expect = 0.68,   Method: Composition-based stats.
 Identities = 20/74 (27%), Positives = 30/74 (40%), Gaps = 4/74 (5%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY----RRKTISFEEVMHG 57
            + +S +I  +G+  Q   M +IS+NIAN  T G       +     ++  S       
Sbjct: 1  MSISSSLYIGTTGIMAQQKNMAVISDNIANVSTVGFKSSHMIFNTLMSQQMGSASVSNQV 60

Query: 58 SGGVRVKKIGVDQS 71
            GV V  I  D S
Sbjct: 61 GQGVGVSSILYDMS 74


>gi|158422271|ref|YP_001523563.1| flagellar hook protein FlgE [Azorhizobium caulinodans ORS 571]
 gi|158329160|dbj|BAF86645.1| flagellar basal body FlaE protein [Azorhizobium caulinodans ORS
           571]
          Length = 430

 Score = 51.4 bits (121), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 18/102 (17%), Positives = 34/102 (33%)

Query: 32  ARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVK 91
               G+T         T+   + +    G   +      +  +            S  ++
Sbjct: 329 VDGNGNTTNLYRIPVATVKSPDNLTPVSGNAYQVTQESGAMQIGLSGSAGVGTIKSNTLE 388

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             NV+V  E  DM    R Y AN +  +   D++   ++L R
Sbjct: 389 NSNVDVASELTDMIVAQRDYTANSKVFQTGTDLLDVLMNLKR 430



 Score = 42.2 bits (97), Expect = 0.026,   Method: Composition-based stats.
 Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 1/70 (1%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            L  +   + SG+  QS ++  IS+NIAN+ TTG    +  +    I        + G 
Sbjct: 1  MSLYGTLRTSVSGMNAQSNKLGTISDNIANSNTTGYKKATTDFSSL-IVDSSTSEYNSGS 59

Query: 62 RVKKIGVDQS 71
             KI  D S
Sbjct: 60 VNTKISYDIS 69


>gi|149189836|ref|ZP_01868116.1| flagellar hook protein E [Vibrio shilonii AK1]
 gi|148836322|gb|EDL53279.1| flagellar hook protein E [Vibrio shilonii AK1]
          Length = 398

 Score = 51.0 bits (120), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 12/60 (20%), Positives = 23/60 (38%)

Query: 71  STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           +  +     G       G ++  NV++  E  ++    R Y AN +TI  S  +     +
Sbjct: 337 APVMGTPGSGVLGDLTPGALEGSNVDLTSELVNLMTAQRNYQANAKTISTSDKLTQALFN 396



 Score = 41.0 bits (94), Expect = 0.055,   Method: Composition-based stats.
 Identities = 22/62 (35%), Positives = 26/62 (41%), Gaps = 5/62 (8%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          S  IA SGL   + ++  IS NIANA T G         R   S       +GGV V  I
Sbjct: 2  SFDIALSGLDATNTQLNTISHNIANASTYGFKE-----ARTEFSAVYNGMQAGGVEVASI 56

Query: 67 GV 68
            
Sbjct: 57 SQ 58


>gi|332296516|ref|YP_004438439.1| flagellar basal-body rod protein FlgG [Thermodesulfobium narugense
           DSM 14796]
 gi|332179619|gb|AEE15308.1| flagellar basal-body rod protein FlgG [Thermodesulfobium narugense
           DSM 14796]
          Length = 262

 Score = 51.0 bits (120), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 10/99 (10%), Positives = 28/99 (28%)

Query: 35  TGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPN 94
            G        +         +   G    +         +             G+++  N
Sbjct: 162 DGTVQDLGTIQLARFINPSGLTSLGSNLYQSTPASGDAILGTPGTQGIGWVEQGMLEMSN 221

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           V V+ E  ++    R Y +  + +     M++   ++ +
Sbjct: 222 VQVVEEMVNLITAERAYESCAKGMTVCDQMLSDANNVKQ 260



 Score = 38.3 bits (87), Expect = 0.34,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 20/40 (50%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          + +   A SG+  Q+  + +I+ N+AN  TTG       +
Sbjct: 1  MRALWTAASGMISQTTNVDVITNNLANVNTTGFKTARAEF 40


>gi|254419105|ref|ZP_05032829.1| conserved domain protein [Brevundimonas sp. BAL3]
 gi|196185282|gb|EDX80258.1| conserved domain protein [Brevundimonas sp. BAL3]
          Length = 588

 Score = 51.0 bits (120), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 9/44 (20%), Positives = 22/44 (50%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++   V++  E   +  T R Y A+ + I  + +M+   +++ R
Sbjct: 545 LESSTVDLSAEFTGLITTQRAYSASSKIITTADEMLAELINIKR 588


>gi|309388845|gb|ADO76725.1| flagellar basal-body rod protein FlgF [Halanaerobium praevalens DSM
           2228]
          Length = 250

 Score = 51.0 bits (120), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 17/78 (21%), Positives = 33/78 (42%), Gaps = 1/78 (1%)

Query: 54  VMHGSGGVRVKKIGVDQSTFVEEFDPGHPVAN-ASGIVKYPNVNVLVETADMRETNRLYM 112
           ++       + + G +      E +P    A  A G V+  NV ++ E A M +T R Y 
Sbjct: 168 LVDFENEAELAQTGDNLYELQGETEPIASQAGIAQGYVEGSNVQIVEEMAKMIKTTRHYE 227

Query: 113 ANLQTIKQSHDMMTTTLD 130
           +N + I    + +   ++
Sbjct: 228 SNQKVISSIDESLNKVIN 245


>gi|254496889|ref|ZP_05109737.1| flagellar basal body rod protein FlgG [Legionella drancourtii
           LLAP12]
 gi|254353908|gb|EET12595.1| flagellar basal body rod protein FlgG [Legionella drancourtii
           LLAP12]
          Length = 261

 Score = 51.0 bits (120), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 11/101 (10%), Positives = 27/101 (26%)

Query: 30  ANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGI 89
           A    +         +         +   G     +     +  +               
Sbjct: 159 ATVAGSTTPTNLGTIQLTNFMNPAGLQPIGQNLYTETQSSGNPTLNNPGSNGLGTLLQNN 218

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           ++  NVNV+ E  +M +  R Y    + ++   +M+     
Sbjct: 219 LEASNVNVVEELVNMIQAQRGYEITAKGMQTVDNMLQYLNQ 259



 Score = 38.3 bits (87), Expect = 0.34,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 18/39 (46%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSD 42
          +  +  ++ SGL  Q   +  I+ N+AN  TTG      
Sbjct: 1  MQPALWVSKSGLEAQEKTIATIANNLANVNTTGYKKDRA 39


>gi|187778772|ref|ZP_02995245.1| hypothetical protein CLOSPO_02367 [Clostridium sporogenes ATCC
           15579]
 gi|187772397|gb|EDU36199.1| hypothetical protein CLOSPO_02367 [Clostridium sporogenes ATCC
           15579]
          Length = 266

 Score = 51.0 bits (120), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 19/116 (16%), Positives = 41/116 (35%), Gaps = 3/116 (2%)

Query: 21  RMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEE---F 77
           R+   ++N  N    G     D      +  +  ++ + G              +E    
Sbjct: 151 RIGGFNKNNINIAEDGSISAKDVDGINKMIGKINIYNAVGSDAFVSIGRNLYIPQEGVNV 210

Query: 78  DPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
              + V+   G ++  NV+   E  +M  T R +  + + IK + +M     +L +
Sbjct: 211 FVNNDVSMLQGFLENSNVDAGKEMTEMIITQRAFELSSRGIKTADEMWGIVNNLRK 266



 Score = 43.3 bits (100), Expect = 0.012,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 24/64 (37%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  L+ +   + SGL  Q  ++  IS N+AN  T G       ++       +       
Sbjct: 1  MMILLRALWNSKSGLIAQQNKLDSISNNLANVNTVGYKREDVSFQELVQETLKRKGYPTS 60

Query: 61 VRVK 64
           R +
Sbjct: 61 DRPE 64


>gi|161526186|ref|YP_001581198.1| flagellar hook protein FlgE [Burkholderia multivorans ATCC 17616]
 gi|189349098|ref|YP_001944726.1| flagellar hook protein FlgE [Burkholderia multivorans ATCC 17616]
 gi|160343615|gb|ABX16701.1| flagellar basal body FlaE domain protein [Burkholderia multivorans
           ATCC 17616]
 gi|189333120|dbj|BAG42190.1| flagellar hook protein [Burkholderia multivorans ATCC 17616]
          Length = 414

 Score = 51.0 bits (120), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 14/83 (16%), Positives = 30/83 (36%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +    +   GG +  +        +      +        ++  NV++  +  ++    
Sbjct: 332 FNNPNGLVNIGGNQYAETAASGVPQISVPGSTNHGTLQGSALENSNVDLTSQLVNLITAQ 391

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y AN QTIK    +  T ++L
Sbjct: 392 RNYQANAQTIKTQQTVDQTLINL 414


>gi|146277708|ref|YP_001167867.1| flagellar basal body FlaE domain-containing protein [Rhodobacter
           sphaeroides ATCC 17025]
 gi|145555949|gb|ABP70562.1| flagellar basal body FlaE domain protein [Rhodobacter sphaeroides
           ATCC 17025]
          Length = 423

 Score = 51.0 bits (120), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 12/84 (14%), Positives = 31/84 (36%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
           T +  + +   G                           +G +++ NV++  E   +   
Sbjct: 338 TFANPQALRQLGASGFAATADSGQPVAGTAGDSGFGIIRAGALEHANVDLTEELVHLITA 397

Query: 108 NRLYMANLQTIKQSHDMMTTTLDL 131
            R Y A+ + ++ S+ +M T +++
Sbjct: 398 QRNYQASAKAMETSNSLMQTIMNI 421


>gi|95929195|ref|ZP_01311939.1| protein of unknown function DUF1078-like [Desulfuromonas
           acetoxidans DSM 684]
 gi|95134693|gb|EAT16348.1| protein of unknown function DUF1078-like [Desulfuromonas
           acetoxidans DSM 684]
          Length = 111

 Score = 51.0 bits (120), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 29/127 (22%), Positives = 50/127 (39%), Gaps = 19/127 (14%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +I +   A SGL  Q+ R+   + N+AN++T G       Y    ++  E   G    ++
Sbjct: 1   MIDAMSSAMSGLQAQTLRLNSTANNVANSQTEG-------YAPSQVTLAENEQGGVRAQL 53

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
           +K            +                V++  E  DM +T + Y ANL+T+  +  
Sbjct: 54  QKPVNGTGDAQTAENQT------------SKVDLAKEMVDMMQTKQFYSANLKTVSVADS 101

Query: 124 MMTTTLD 130
           M    LD
Sbjct: 102 MSGDLLD 108


>gi|312884834|ref|ZP_07744526.1| flagellar hook protein FlgE [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309367486|gb|EFP95046.1| flagellar hook protein FlgE [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 398

 Score = 51.0 bits (120), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 12/60 (20%), Positives = 24/60 (40%)

Query: 71  STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           +  V     G     + G ++  NV++  E  ++    R Y AN +TI  +  +     +
Sbjct: 337 APIVGVPGTGTLGDLSPGALEGSNVDLTSELVNLMTAQRNYQANAKTISTNDKLTQALFN 396



 Score = 38.7 bits (88), Expect = 0.30,   Method: Composition-based stats.
 Identities = 23/62 (37%), Positives = 26/62 (41%), Gaps = 5/62 (8%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          S +IA SGL   +  +  IS NIANA TTG         R   S        GGV V  I
Sbjct: 2  SFNIALSGLDATNTDLNTISHNIANASTTGFK-----GARTEFSAVYNGMQPGGVEVASI 56

Query: 67 GV 68
            
Sbjct: 57 SQ 58


>gi|167770195|ref|ZP_02442248.1| hypothetical protein ANACOL_01538 [Anaerotruncus colihominis DSM
           17241]
 gi|167667517|gb|EDS11647.1| hypothetical protein ANACOL_01538 [Anaerotruncus colihominis DSM
           17241]
          Length = 273

 Score = 51.0 bits (120), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 12/83 (14%), Positives = 34/83 (40%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +   +   +GG R   I    +          P    +G+++   V++  E A++  + 
Sbjct: 190 PNPYGLEPNTGGFRETPISGTPTVIKASSRASRPYTIVTGMLEQSAVDLSEEMANIIVSQ 249

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R +  + + ++ + ++  T  +L
Sbjct: 250 RAFQFSAKMVQTADEIEDTVNNL 272



 Score = 34.1 bits (76), Expect = 5.9,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 18/41 (43%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  + +   SGL      M ++S N+AN  T G  P    +
Sbjct: 1  MNIAFYNGVSGLVAYQQEMDLVSNNVANVNTVGYKPSRASF 41


>gi|332994161|gb|AEF04216.1| flagellar basal-body rod protein FlgF [Alteromonas sp. SN2]
          Length = 247

 Score = 51.0 bits (120), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 25/48 (52%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            SG+++  NVN + E  +M    R Y   ++ +KQ+ ++      LLR
Sbjct: 198 MSGMLEGSNVNAVDEMVNMISLQRHYELQVKMMKQADELDARGNQLLR 245


>gi|331666548|ref|ZP_08367422.1| flagellar basal-body rod protein FlgG [Escherichia coli TA271]
 gi|331065772|gb|EGI37656.1| flagellar basal-body rod protein FlgG [Escherichia coli TA271]
          Length = 261

 Score = 51.0 bits (120), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 10/78 (12%), Positives = 22/78 (28%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +    +   G     +                        ++  NV+++ E   M    
Sbjct: 178 FANPAGLSAEGDNLYLETAASGQPTEGVPGEDGLGTLQDNALEGSNVDIVNEMVAMITVQ 237

Query: 109 RLYMANLQTIKQSHDMMT 126
           R Y  N + +  + DM+ 
Sbjct: 238 RAYEMNAKMVSAADDMLQ 255



 Score = 39.5 bits (90), Expect = 0.18,   Method: Composition-based stats.
 Identities = 15/42 (35%), Positives = 23/42 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          + A+  I+ +GL+ Q A M  I+ NIAN  TTG       ++
Sbjct: 1  MNAALWISKTGLSAQDAEMSAIANNIANVNTTGFKRDRVMFQ 42


>gi|149184209|ref|ZP_01862527.1| Flagellar basal-body rod FlgG [Erythrobacter sp. SD-21]
 gi|148831529|gb|EDL49962.1| Flagellar basal-body rod FlgG [Erythrobacter sp. SD-21]
          Length = 243

 Score = 51.0 bits (120), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 12/86 (13%), Positives = 29/86 (33%)

Query: 45  RRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
           +    +    +   G   + +     +  +             G+++  NVN++ E  +M
Sbjct: 156 QIARFTNPSGLQAIGDNFLVETAASGAPELAPGGENGRGNIRQGMLESSNVNIVEELVEM 215

Query: 105 RETNRLYMANLQTIKQSHDMMTTTLD 130
            E  R Y  + + I    +M+     
Sbjct: 216 IECQRAYEISSKMISAVDEMLRNANQ 241


>gi|197120190|ref|YP_002140617.1| flagellar hook protein FlgE [Geobacter bemidjiensis Bem]
 gi|197089550|gb|ACH40821.1| flagellar hook protein FlgE [Geobacter bemidjiensis Bem]
          Length = 294

 Score = 51.0 bits (120), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 15/44 (34%), Positives = 21/44 (47%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++   V++  E   M  T R Y AN +TI  S  M    L L+R
Sbjct: 251 LEQSTVDLANEFVKMITTQRAYSANSKTITTSDQMTQEVLSLIR 294


>gi|312126441|ref|YP_003991315.1| fagellar hook-basal body protein [Caldicellulosiruptor
           hydrothermalis 108]
 gi|311776460|gb|ADQ05946.1| fagellar hook-basal body protein [Caldicellulosiruptor
           hydrothermalis 108]
          Length = 255

 Score = 51.0 bits (120), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 19/44 (43%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            G ++  NVN + E  +M    R Y AN +      + +   ++
Sbjct: 207 QGYLEGSNVNSVQEMVNMINVLRAYEANQKAFVIQDETLQKAVN 250



 Score = 34.1 bits (76), Expect = 7.2,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 42/115 (36%), Gaps = 16/115 (13%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSD------------PYRRKTISF 51
           +I   + + SG+ +    M I + N+ N  TTG                   Y + +   
Sbjct: 1   MIRGIYTSASGMILNQKLMDITANNVGNVSTTGFKRDVAQVESFRNMLAYRIYDKPSSPD 60

Query: 52  EEVMHGSGGVRVKKIGVDQST--FVEEFDPGHPVANASGI--VKYPNVNVLVETA 102
             + + S G  V +I  D S   +++  +P +     +G   V+ PN     +  
Sbjct: 61  NAIGYMSLGSDVSRIVSDFSQGLYIKTDEPLNLAIRGNGFFAVEMPNNQGAQQIL 115


>gi|260866415|ref|YP_003232817.1| putative lateral flagellar component of cell-distal portion of
           basal-body rod [Escherichia coli O111:H- str. 11128]
 gi|257762771|dbj|BAI34266.1| predicted lateral flagellar component of cell-distal portion of
           basal-body rod [Escherichia coli O111:H- str. 11128]
 gi|323178492|gb|EFZ64070.1| flagellar basal-body rod protein FlgG [Escherichia coli 1180]
          Length = 261

 Score = 51.0 bits (120), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 10/78 (12%), Positives = 22/78 (28%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +    +   G     +                        ++  NV+++ E   M    
Sbjct: 178 FANPAGLSAEGDNLYLETAASGQPTEGVPGEDGLGTLQDNALEGSNVDIVNEMVAMITVQ 237

Query: 109 RLYMANLQTIKQSHDMMT 126
           R Y  N + +  + DM+ 
Sbjct: 238 RAYEMNAKMVSAADDMLQ 255



 Score = 39.5 bits (90), Expect = 0.18,   Method: Composition-based stats.
 Identities = 15/42 (35%), Positives = 23/42 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          + A+  I+ +GL+ Q A M  I+ NIAN  TTG       ++
Sbjct: 1  MNAALWISKTGLSAQDAEMSAIANNIANVNTTGFKRDRVMFQ 42


>gi|119899027|ref|YP_934240.1| FlgE protein [Azoarcus sp. BH72]
 gi|119671440|emb|CAL95353.1| FlgE protein [Azoarcus sp. BH72]
          Length = 445

 Score = 51.0 bits (120), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 27/60 (45%)

Query: 72  TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             V     G   +  +G ++  NV++  E   M    R Y AN Q+I+    ++ T ++L
Sbjct: 385 PTVGAPGTGVLGSVTAGQIEESNVDLTQELVSMIVQQRNYQANAQSIRTQDQILQTLVNL 444



 Score = 33.7 bits (75), Expect = 9.3,   Method: Composition-based stats.
 Identities = 19/96 (19%), Positives = 31/96 (32%), Gaps = 6/96 (6%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDP----YRRKTISFEEVMHGSGGVR 62
          +     SGL   S  + +IS N+ANA T G    +      Y          +    G +
Sbjct: 2  AFQQGLSGLNSSSKALDVISNNVANASTVGFKASNTIFADMYASAMTGGTSSLQVGIGSK 61

Query: 63 VKKIGVD--QSTFVEEFDPGHPVANASGIVKYPNVN 96
          V  +     Q       +P     N +G  +    +
Sbjct: 62 VAAVTQSFTQGNLTATNNPLDMAINGNGFFRLSRSD 97


>gi|308186393|ref|YP_003930524.1| Flagellar hook protein FlgE [Pantoea vagans C9-1]
 gi|308056903|gb|ADO09075.1| Flagellar hook protein FlgE [Pantoea vagans C9-1]
          Length = 418

 Score = 51.0 bits (120), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 14/42 (33%), Positives = 23/42 (54%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           ++  NV++  E  +M    R Y AN QTIK    ++ T ++L
Sbjct: 376 LESSNVDMSKELVNMIVAQRNYQANAQTIKTQDQILNTLVNL 417


>gi|238799107|ref|ZP_04642563.1| Flagellar hook protein FlgE [Yersinia mollaretii ATCC 43969]
 gi|238717054|gb|EEQ08914.1| Flagellar hook protein FlgE [Yersinia mollaretii ATCC 43969]
          Length = 420

 Score = 51.0 bits (120), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 34/83 (40%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +  E +   G    K+     +  +     G      SG ++  NV++  E  +M    
Sbjct: 337 FANPEGLSSEGDNVWKETRASGNPMLGTAGGGGFGTLTSGALESSNVDLSKELVNMIVAQ 396

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y +N QTIK    ++ T ++L
Sbjct: 397 RNYQSNAQTIKTQDQILQTLVNL 419



 Score = 35.2 bits (79), Expect = 3.4,   Method: Composition-based stats.
 Identities = 19/63 (30%), Positives = 26/63 (41%), Gaps = 4/63 (6%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
              A SGL   S+ + +I  NIAN+ T+G   GS  +               GV+V  I
Sbjct: 2  GFSQAVSGLNAASSNLDVIGNNIANSATSGFKAGSVSFA----DMFAGSQTGMGVKVAGI 57

Query: 67 GVD 69
            D
Sbjct: 58 TQD 60


>gi|120554034|ref|YP_958385.1| flagellar basal body rod protein FlgF [Marinobacter aquaeolei VT8]
 gi|120323883|gb|ABM18198.1| flagellar basal-body rod protein FlgF [Marinobacter aquaeolei VT8]
          Length = 250

 Score = 51.0 bits (120), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 14/89 (15%), Positives = 31/89 (34%)

Query: 46  RKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
           R  +          G+                 P   +  A+G ++  NVN + E     
Sbjct: 161 RLKLVNPPADALEKGLDGFIRRKPDQALDGPEPPDAAMRVATGFLESSNVNAVEEMISNL 220

Query: 106 ETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
           + +R Y   ++ +  +++    T  LL++
Sbjct: 221 QLSRQYEMQVKVMTTANENSEATARLLQN 249


>gi|238764392|ref|ZP_04625342.1| Flagellar hook protein FlgE [Yersinia kristensenii ATCC 33638]
 gi|238697418|gb|EEP90185.1| Flagellar hook protein FlgE [Yersinia kristensenii ATCC 33638]
          Length = 437

 Score = 51.0 bits (120), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 15/46 (32%), Positives = 25/46 (54%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            SG ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 391 TSGALESSNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILQTLVNL 436



 Score = 35.6 bits (80), Expect = 2.0,   Method: Composition-based stats.
 Identities = 19/63 (30%), Positives = 26/63 (41%), Gaps = 4/63 (6%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
              A SGL   S+ + +I  NIAN+ T+G   GS  +               GV+V  I
Sbjct: 2  GFSQAVSGLNAASSNLDVIGNNIANSATSGFKAGSVSFA----DMFAGSQTGMGVKVAGI 57

Query: 67 GVD 69
            D
Sbjct: 58 TQD 60


>gi|168182721|ref|ZP_02617385.1| flagellar basal body rod protein [Clostridium botulinum Bf]
 gi|237796077|ref|YP_002863629.1| flagellar basal body rod protein FlgG [Clostridium botulinum Ba4
           str. 657]
 gi|182674133|gb|EDT86094.1| flagellar basal body rod protein [Clostridium botulinum Bf]
 gi|229261217|gb|ACQ52250.1| flagellar basal body rod protein [Clostridium botulinum Ba4 str.
           657]
          Length = 263

 Score = 51.0 bits (120), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 19/116 (16%), Positives = 41/116 (35%), Gaps = 3/116 (2%)

Query: 21  RMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEE---F 77
           R+   S+N  N    G     D      +  +  ++ + G              +E    
Sbjct: 148 RIGGFSKNNINIAEDGSISVKDIDGINKMVGKINIYNAVGSDAFVSIGRNLYIPQEGVNV 207

Query: 78  DPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
              + V+   G ++  NV+   E  +M  T R +  + + IK + +M     ++ +
Sbjct: 208 FANNDVSILQGFLENSNVDAGKEMTEMIITQRAFELSSRGIKTADEMWGIVNNMRK 263



 Score = 40.2 bits (92), Expect = 0.085,   Method: Composition-based stats.
 Identities = 12/61 (19%), Positives = 23/61 (37%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ +   + SGL  Q  ++  IS N+AN  T G       ++       +        R 
Sbjct: 1  MLRALWNSKSGLIAQQNKLDSISNNLANVNTVGYKREDVSFQELVQETLKRKGYPTSDRP 60

Query: 64 K 64
          +
Sbjct: 61 E 61


>gi|85715029|ref|ZP_01046014.1| Flagellar basal body rod protein, FlaE [Nitrobacter sp. Nb-311A]
 gi|85698226|gb|EAQ36098.1| Flagellar basal body rod protein, FlaE [Nitrobacter sp. Nb-311A]
          Length = 640

 Score = 51.0 bits (120), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 30/67 (44%), Gaps = 3/67 (4%)

Query: 67  GVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
             D+S        GH   ++   ++  N ++  E   +  T + Y AN + I  ++ M+ 
Sbjct: 577 VTDESGPAIAGAAGHISGSS---LEGSNTDIADEFTKLIVTQQAYSANTKVITTANSMVQ 633

Query: 127 TTLDLLR 133
             L++LR
Sbjct: 634 DLLNVLR 640



 Score = 37.5 bits (85), Expect = 0.55,   Method: Composition-based stats.
 Identities = 14/43 (32%), Positives = 23/43 (53%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
            +  + + +  GL  QS  +Q IS NIAN++TTG    +  +
Sbjct: 28 MGIFDALNTSVGGLQAQSFALQNISGNIANSQTTGYKGITTAF 70


>gi|332800001|ref|YP_004461500.1| flagellar basal-body rod protein FlgF [Tepidanaerobacter sp. Re1]
 gi|332697736|gb|AEE92193.1| flagellar basal-body rod protein FlgF [Tepidanaerobacter sp. Re1]
          Length = 255

 Score = 51.0 bits (120), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 9/44 (20%), Positives = 20/44 (45%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            G ++  N N + E  D+    R Y A+ + I+   + +   ++
Sbjct: 207 QGALEGSNTNTISEMVDLITAFRAYEASQKVIQTHDETLDRAVN 250



 Score = 43.7 bits (101), Expect = 0.009,   Method: Composition-based stats.
 Identities = 15/73 (20%), Positives = 28/73 (38%), Gaps = 1/73 (1%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I   +   SG+  + +R  +IS N+AN  T+G       +R               V +
Sbjct: 1  MIRGLYTGASGMLSEMSRTDVISNNLANVNTSGFKKDRAIFRALPEMNIHRFDDPITVGL 60

Query: 64 KKIGVDQSTFVEE 76
           ++  D   F+  
Sbjct: 61 DRVI-DPRPFIGM 72


>gi|156934440|ref|YP_001438356.1| flagellar hook protein FlgE [Cronobacter sakazakii ATCC BAA-894]
 gi|156532694|gb|ABU77520.1| hypothetical protein ESA_02271 [Cronobacter sakazakii ATCC BAA-894]
          Length = 409

 Score = 51.0 bits (120), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 26/51 (50%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +     SG ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 358 NFGKLTSGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 408



 Score = 37.2 bits (84), Expect = 0.84,   Method: Composition-based stats.
 Identities = 20/72 (27%), Positives = 26/72 (36%), Gaps = 4/72 (5%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          +   A SGL   S  + +I  NIAN+ T G   GS  +               GV+V  I
Sbjct: 2  AFSQAVSGLNAASTNLDVIGNNIANSATYGFKSGSVSFA----DMFAGSKAGLGVKVAGI 57

Query: 67 GVDQSTFVEEFD 78
            D    V    
Sbjct: 58 TQDFGDGVTTNT 69


>gi|225181585|ref|ZP_03735026.1| flagellar basal body rod protein [Dethiobacter alkaliphilus AHT 1]
 gi|225167693|gb|EEG76503.1| flagellar basal body rod protein [Dethiobacter alkaliphilus AHT 1]
          Length = 251

 Score = 51.0 bits (120), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 18/47 (38%)

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
               G ++  NV  + E   M    R Y  N + ++   DM+    +
Sbjct: 199 MVKQGFLEGSNVQAVQEMVQMLAAMRAYETNQRVVQAQDDMLRKATN 245



 Score = 37.9 bits (86), Expect = 0.47,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 27/64 (42%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I   + A SG+ V+S R + I+ N+AN+ TTG        R         +       V
Sbjct: 1  MIRGLYTAASGMMVESTRQETITNNLANSETTGFKRDLALQRSHGEQPVVRLGDRQPFGV 60

Query: 64 KKIG 67
          + + 
Sbjct: 61 RPVI 64


>gi|115523522|ref|YP_780433.1| flagellar basal body FlaE domain-containing protein
           [Rhodopseudomonas palustris BisA53]
 gi|115517469|gb|ABJ05453.1| flagellar basal body FlaE domain protein [Rhodopseudomonas
           palustris BisA53]
          Length = 602

 Score = 51.0 bits (120), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 23/44 (52%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  N ++  E   +  T + Y AN + I  ++ M+   L+++R
Sbjct: 559 LEASNTDIADEFTKLIVTQQAYSANTKVITTANTMVQDLLNVMR 602


>gi|73539450|ref|YP_299817.1| flagellar hook protein FlgE [Ralstonia eutropha JMP134]
 gi|72122787|gb|AAZ64973.1| Flagellar basal body rod protein:Protein of unknown function
           DUF1078:Flagellar basal body FlaE [Ralstonia eutropha
           JMP134]
          Length = 417

 Score = 51.0 bits (120), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 24/42 (57%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           V+  NV++  E  ++    R Y AN +TI+  + +M + +++
Sbjct: 376 VEASNVDLSGELVNLIVAQRNYQANAKTIETQNQVMNSLMNM 417


>gi|315587007|gb|ADU41388.1| flagellar hook-associated protein FlgK [Helicobacter pylori 35A]
          Length = 606

 Score = 51.0 bits (120), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 21/122 (17%), Positives = 36/122 (29%), Gaps = 4/122 (3%)

Query: 16  AVQSARMQIISEN--IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTF 73
                 +  I+ N  +AN          D Y  K    +  +         KI  D    
Sbjct: 485 TAIRPWLAPINGNFDVANMMQQLQYDSVDFYNDKFDIKQMKISEFYQFLTGKINTDAEKS 544

Query: 74  VEEFDPGHPV--ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
               D    +        +    V+V  E  ++ +    Y AN + I     M+ T L +
Sbjct: 545 GRILDTKKSMLETIKKEQLSISQVSVDEEMVNLIKFQSGYAANAKVITAIDRMIDTLLGI 604

Query: 132 LR 133
            +
Sbjct: 605 KQ 606



 Score = 43.7 bits (101), Expect = 0.009,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 40/111 (36%), Gaps = 9/111 (8%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M  +++S + + +GL    + + +   NI+NA         + Y R+ +  +       G
Sbjct: 1   MGGILSSLNASYTGLQAHQSMVDVTGNNISNASD-------EFYSRQRVIAKPQEAYMYG 53

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
            +   +GVD        D            +  N     E + ++E +  +
Sbjct: 54  TKNVNMGVDVEAIERVHDEFVFSRYTKANYE--NTYYDTEFSHLKEASAYF 102


>gi|157371207|ref|YP_001479196.1| flagellar hook protein FlgE [Serratia proteamaculans 568]
 gi|157322971|gb|ABV42068.1| flagellar basal body FlaE domain protein [Serratia proteamaculans
           568]
          Length = 407

 Score = 51.0 bits (120), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 21/83 (25%), Positives = 33/83 (39%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            S  E +   G    ++ G      V     G      SG ++  NV++  E  +M    
Sbjct: 324 FSNPEGLSSQGDNVWQETGASGQPRVGIAGGGGFGKLTSGALEASNVDLSQELVNMIVAQ 383

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y +N QTIK    ++ T + L
Sbjct: 384 RNYQSNAQTIKTQDSILQTLVSL 406



 Score = 34.5 bits (77), Expect = 5.2,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 20/39 (51%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          +   A SGL   +  + +I  NIAN+ T+G   G+  + 
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATSGFKSGTVSFA 40


>gi|260222468|emb|CBA32062.1| hypothetical protein Csp_D30240 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 104

 Score = 51.0 bits (120), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 17/46 (36%), Positives = 26/46 (56%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            SG ++  NV++  E  +M    R Y AN QTIK    +M+T ++L
Sbjct: 58  RSGALEDSNVDLTGELVNMMTAQRNYQANAQTIKTQDQIMSTLVNL 103


>gi|260597445|ref|YP_003210016.1| flagellar hook protein FlgE [Cronobacter turicensis z3032]
 gi|260216622|emb|CBA29917.1| Flagellar hook protein flgE [Cronobacter turicensis z3032]
          Length = 410

 Score = 51.0 bits (120), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 26/51 (50%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +     SG ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 359 NFGKLTSGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 409



 Score = 37.2 bits (84), Expect = 0.89,   Method: Composition-based stats.
 Identities = 20/72 (27%), Positives = 26/72 (36%), Gaps = 4/72 (5%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          +   A SGL   S  + +I  NIAN+ T G   GS  +               GV+V  I
Sbjct: 2  AFSQAVSGLNAASTNLDVIGNNIANSATYGFKSGSVSFA----DMFAGSKAGLGVKVAGI 57

Query: 67 GVDQSTFVEEFD 78
            D    V    
Sbjct: 58 TQDFGDGVTTNT 69


>gi|323967017|gb|EGB62443.1| fagellar hook-basal body protein [Escherichia coli M863]
 gi|327253475|gb|EGE65113.1| flagellar hook protein flgE [Escherichia coli STEC_7v]
          Length = 401

 Score = 51.0 bits (120), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 26/51 (50%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +     +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 350 NFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 400



 Score = 35.6 bits (80), Expect = 2.1,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 4/63 (6%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          +   A SGL   +  + +I  NIAN+ T G   G+  +               GV+V  I
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFA----DMFAGSKVGLGVKVAGI 57

Query: 67 GVD 69
            D
Sbjct: 58 TQD 60


>gi|293395583|ref|ZP_06639866.1| flagellar hook protein FlgE [Serratia odorifera DSM 4582]
 gi|291421902|gb|EFE95148.1| flagellar hook protein FlgE [Serratia odorifera DSM 4582]
          Length = 411

 Score = 51.0 bits (120), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 21/83 (25%), Positives = 33/83 (39%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            S  E +   G    ++ G      V     G      SG ++  NV++  E  +M    
Sbjct: 328 FSNPEGLASKGDNVWQETGASGQPRVGTAGGGGFGNLTSGALEASNVDLSQELVNMIVAQ 387

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y +N QTIK    ++ T + L
Sbjct: 388 RNYQSNAQTIKTQDSILQTLVSL 410



 Score = 34.5 bits (77), Expect = 5.6,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 19/39 (48%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          +   A SGL   +  + +I  NIAN+ T G   GS  + 
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATAGFKSGSVSFA 40


>gi|158604896|gb|ABW74721.1| flagellar hook protein [Campylobacter concisus 13826]
          Length = 533

 Score = 51.0 bits (120), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 13/109 (11%), Positives = 40/109 (36%), Gaps = 8/109 (7%)

Query: 33  RTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGI--- 89
               +   +  +    ++    ++  G  +V     + +    E       A  +     
Sbjct: 425 NIMANFDNTRAFPVAKVALYHFINDQGVAKVGDNLYEATANSGEPFFYKNKAGETVYGAQ 484

Query: 90  -----VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
                ++  NV++    +++  T + Y A+ ++I  S +M+ T + + +
Sbjct: 485 ILANKLEMSNVDLGQALSEVIVTQKAYEASAKSITTSDEMIQTAIQMKK 533


>gi|323492338|ref|ZP_08097491.1| flagellar hook protein FlgE [Vibrio brasiliensis LMG 20546]
 gi|323313385|gb|EGA66496.1| flagellar hook protein FlgE [Vibrio brasiliensis LMG 20546]
          Length = 398

 Score = 51.0 bits (120), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 16/105 (15%), Positives = 32/105 (30%), Gaps = 5/105 (4%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQS-----TFVEEFDPGHPVAN 85
           N              +  +   +  +  G  +V      QS       +     G     
Sbjct: 292 NGMVYATYTNGQSQLQGQVVLADFANPQGLAKVSGTAWTQSFSSGAPIMGVPGSGTLGDL 351

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             G ++  NV++  E  ++    R Y AN +TI  +  +     +
Sbjct: 352 TPGALEGSNVDLTSELVNLMTAQRNYQANAKTISTNDKLTQALFN 396



 Score = 39.1 bits (89), Expect = 0.19,   Method: Composition-based stats.
 Identities = 15/40 (37%), Positives = 19/40 (47%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR 46
          S +IA SGL   +  +  IS NIANA T G       +  
Sbjct: 2  SFNIALSGLDATNTELNTISHNIANASTYGFKGARTEFAA 41


>gi|253688972|ref|YP_003018162.1| hypothetical protein PC1_2595 [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|251755550|gb|ACT13626.1| protein of unknown function DUF1078 domain protein [Pectobacterium
           carotovorum subsp. carotovorum PC1]
          Length = 405

 Score = 51.0 bits (120), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 21/41 (51%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NV++  E  +M    R Y +N QTIK    ++ T + L
Sbjct: 364 EMSNVDLSKELVNMIVAQRNYQSNAQTIKTQDSILQTLVSL 404



 Score = 36.0 bits (81), Expect = 1.6,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 24/63 (38%), Gaps = 4/63 (6%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
              A SGL   S  + +I  NIAN+ T G   G+  +               GV+V  +
Sbjct: 2  GFSQAVSGLNAASNNLDVIGNNIANSATVGFKSGTVTFA----DMFAGSKVGMGVKVASV 57

Query: 67 GVD 69
            D
Sbjct: 58 LQD 60


>gi|168335334|ref|ZP_02693430.1| Flagellar basal body and hook proteins [Epulopiscium sp. 'N.t.
           morphotype B']
          Length = 256

 Score = 51.0 bits (120), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 22/45 (48%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             G ++  NVN +    DM   +R Y AN + ++   +++   ++
Sbjct: 207 EQGYLESSNVNPVNAMVDMISVSRAYEANQRMVQIHDELVGRAVN 251



 Score = 40.6 bits (93), Expect = 0.070,   Method: Composition-based stats.
 Identities = 18/86 (20%), Positives = 33/86 (38%), Gaps = 8/86 (9%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++   + A +G+ VQ+ RM +IS ++AN+ TT          RK  +  E        R+
Sbjct: 1  MVRGLYTAATGMQVQTRRMDVISNDLANSNTTA--------YRKDYAVVEAFDEVLMKRL 52

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGI 89
            I      + +     +    A   
Sbjct: 53 DGINEPPWRYKDLGTVMNGAKVADIY 78


>gi|326386932|ref|ZP_08208546.1| flagellar basal body rod protein FlgG [Novosphingobium
           nitrogenifigens DSM 19370]
 gi|326208612|gb|EGD59415.1| flagellar basal body rod protein FlgG [Novosphingobium
           nitrogenifigens DSM 19370]
          Length = 262

 Score = 51.0 bits (120), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 14/82 (17%), Positives = 25/82 (30%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +    +   G     +        +             G ++  NV+V+ E  DM E  
Sbjct: 179 FTNPAALKAIGDNFYTETTGSGPVQLGIAGQNGRGNVRQGFLEASNVSVVSELVDMIECQ 238

Query: 109 RLYMANLQTIKQSHDMMTTTLD 130
           R Y  N + +    DM+     
Sbjct: 239 RAYEINSKMVSAVDDMLKNANQ 260



 Score = 40.6 bits (93), Expect = 0.073,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 24/60 (40%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           ++ ++A +GL  Q  RM++I+ N+AN  TTG       +         V          
Sbjct: 3  SSALYVARTGLEAQDTRMRVIANNLANVSTTGFKRDRANFASLAYQDARVAGAQSSNETT 62


>gi|224825164|ref|ZP_03698270.1| flagellar basal body FlaE domain protein [Lutiella nitroferrum
           2002]
 gi|224602835|gb|EEG09012.1| flagellar basal body FlaE domain protein [Lutiella nitroferrum
           2002]
          Length = 419

 Score = 51.0 bits (120), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 24/115 (20%), Positives = 40/115 (34%), Gaps = 7/115 (6%)

Query: 24  IISENIANAR------TTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEF 77
           + S NI N        + G T           +  + +   GG   K +           
Sbjct: 304 LTSTNINNQGIIEATYSNGKTVAIGQVALANFTNVQGLQSMGGNLWKDVASSTGGAKVGA 363

Query: 78  DPGHPVAN-ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
                +    S  ++  NV++  E  DM    R Y AN Q+IK    ++ T ++L
Sbjct: 364 PMSADLGEIQSQALEQSNVDLNSELVDMIVAQRFYQANAQSIKTEDTILQTLINL 418


>gi|94495411|ref|ZP_01301991.1| flagellar basal-body rod protein FlgG [Sphingomonas sp. SKA58]
 gi|94424799|gb|EAT09820.1| flagellar basal-body rod protein FlgG [Sphingomonas sp. SKA58]
          Length = 281

 Score = 51.0 bits (120), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 19/116 (16%), Positives = 44/116 (37%), Gaps = 1/116 (0%)

Query: 17  VQSARMQIISENIANA-RTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVE 75
            Q   + +  E + +A    G T         + +  E +   G           +  + 
Sbjct: 164 AQLTSVGVSKEGLVSAIYADGSTVYLGQVAMASFNSLEGLRQQGDAHWTSTVESGNPILG 223

Query: 76  EFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             + G   +  SG ++  NV++  E   +    R + AN + I+ ++ + TT +++
Sbjct: 224 TANQGMFGSVNSGSLERSNVDITDELVQLIAAQRNFQANSKAIEAANTLTTTIVNI 279


>gi|221215571|ref|ZP_03588534.1| flagellar hook protein FlgE [Burkholderia multivorans CGD1]
 gi|221164559|gb|EED97042.1| flagellar hook protein FlgE [Burkholderia multivorans CGD1]
          Length = 413

 Score = 51.0 bits (120), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 14/83 (16%), Positives = 30/83 (36%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +    +   GG +  +        +      +        ++  NV++  +  ++    
Sbjct: 331 FNNPNGLVNIGGNQYAETPASGVPQISVPGSTNHGTLQGSALENSNVDLTSQLVNLITAQ 390

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y AN QTIK    +  T ++L
Sbjct: 391 RNYQANAQTIKTQQTVDQTLINL 413


>gi|170680582|ref|YP_001742375.1| flagellar basal body rod protein FlgG [Escherichia coli SMS-3-5]
 gi|256020230|ref|ZP_05434095.1| flagellar basal body rod protein FlgG [Shigella sp. D9]
 gi|260853468|ref|YP_003227359.1| putative lateral flagellar component of cell-distal portion of
           basal-body rod [Escherichia coli O26:H11 str. 11368]
 gi|293403357|ref|ZP_06647448.1| flgG [Escherichia coli FVEC1412]
 gi|293408369|ref|ZP_06652208.1| flagellar basal-body rod protein FlgG [Escherichia coli B354]
 gi|298378968|ref|ZP_06988849.1| flagellar basal-body rod protein FlgG [Escherichia coli FVEC1302]
 gi|300900357|ref|ZP_07118533.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 198-1]
 gi|300936128|ref|ZP_07151067.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 21-1]
 gi|306813301|ref|ZP_07447494.1| flagellar basal body rod protein FlgG [Escherichia coli NC101]
 gi|307313517|ref|ZP_07593138.1| flagellar basal-body rod protein FlgG [Escherichia coli W]
 gi|331645420|ref|ZP_08346524.1| flagellar basal-body rod protein FlgG [Escherichia coli M605]
 gi|332281392|ref|ZP_08393805.1| lateral flagellar rod protein [Shigella sp. D9]
 gi|59889782|emb|CAH19138.1| Lateral flagellar rod protein (FlgG-like) [Escherichia coli]
 gi|170518300|gb|ACB16478.1| lateral flagellar rod protein LfgG [Escherichia coli SMS-3-5]
 gi|257752117|dbj|BAI23619.1| predicted lateral flagellar component of cell-distal portion of
           basal-body rod [Escherichia coli O26:H11 str. 11368]
 gi|284920046|emb|CBG33103.1| lateral flagellar rod protein (FlgG-like) [Escherichia coli 042]
 gi|291429210|gb|EFF02230.1| flgG [Escherichia coli FVEC1412]
 gi|291471547|gb|EFF14030.1| flagellar basal-body rod protein FlgG [Escherichia coli B354]
 gi|298280081|gb|EFI21585.1| flagellar basal-body rod protein FlgG [Escherichia coli FVEC1302]
 gi|300356125|gb|EFJ71995.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 198-1]
 gi|300458706|gb|EFK22199.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 21-1]
 gi|305854064|gb|EFM54503.1| flagellar basal body rod protein FlgG [Escherichia coli NC101]
 gi|306906685|gb|EFN37196.1| flagellar basal-body rod protein FlgG [Escherichia coli W]
 gi|315059544|gb|ADT73871.1| flagellar component of cell-distal portion of basal-body rod
           [Escherichia coli W]
 gi|323158101|gb|EFZ44200.1| flagellar basal-body rod protein FlgG [Escherichia coli EPECa14]
 gi|323171066|gb|EFZ56715.1| flagellar basal-body rod protein FlgG [Escherichia coli LT-68]
 gi|323191540|gb|EFZ76801.1| flagellar basal-body rod protein FlgG [Escherichia coli RN587/1]
 gi|323379897|gb|ADX52165.1| flagellar basal-body rod protein FlgG [Escherichia coli KO11]
 gi|323975928|gb|EGB71022.1| flagellar basal-body rod protein FlgG [Escherichia coli TW10509]
 gi|327254556|gb|EGE66172.1| flagellar basal-body rod protein FlgG [Escherichia coli STEC_7v]
 gi|331045582|gb|EGI17708.1| flagellar basal-body rod protein FlgG [Escherichia coli M605]
 gi|332103744|gb|EGJ07090.1| lateral flagellar rod protein [Shigella sp. D9]
          Length = 261

 Score = 51.0 bits (120), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 10/78 (12%), Positives = 22/78 (28%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +    +   G     +                        ++  NV+++ E   M    
Sbjct: 178 FANPAGLSAEGDNLYLETAASGQPTEGVPGEDGLGTLQDNALEGSNVDIVNEMVAMITVQ 237

Query: 109 RLYMANLQTIKQSHDMMT 126
           R Y  N + +  + DM+ 
Sbjct: 238 RAYEMNAKMVSAADDMLQ 255



 Score = 39.1 bits (89), Expect = 0.20,   Method: Composition-based stats.
 Identities = 15/42 (35%), Positives = 23/42 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          + A+  I+ +GL+ Q A M  I+ NIAN  TTG       ++
Sbjct: 1  MNAALWISKTGLSAQDAEMSAIANNIANVNTTGFKRDRVMFQ 42


>gi|91794995|ref|YP_564646.1| flagellar hook protein FlgE [Shewanella denitrificans OS217]
 gi|91716997|gb|ABE56923.1| flagellar basal body FlaE [Shewanella denitrificans OS217]
          Length = 402

 Score = 51.0 bits (120), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 18/42 (42%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            ++  NV+   E  ++    R Y +N + +  +  M    L+
Sbjct: 359 YLEGSNVDTTAEMVNLMSAQRNYQSNAKVLDVNSTMQQALLN 400



 Score = 36.4 bits (82), Expect = 1.2,   Method: Composition-based stats.
 Identities = 15/40 (37%), Positives = 20/40 (50%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR 46
          S +IA SGL   +  +  IS NIAN+ T G   G   +  
Sbjct: 2  SFNIALSGLQSTTQDLNTISNNIANSSTVGFRGGRSEFAA 41


>gi|317014505|gb|ADU81941.1| flagellar hook-associated protein FlgK [Helicobacter pylori
           Gambia94/24]
          Length = 606

 Score = 51.0 bits (120), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 21/119 (17%), Positives = 37/119 (31%), Gaps = 4/119 (3%)

Query: 19  SARMQIISEN--IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVD--QSTFV 74
              +  I+ N  +AN          D Y  K       +         KI  D  +S  +
Sbjct: 488 RPWLAPINGNFDVANMMQQLQYDSVDFYNDKFDIKPMKISEFYQFLTGKINTDAEKSGRI 547

Query: 75  EEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            +             +    V+V  E  ++ +    Y AN + I     M+ T L + +
Sbjct: 548 LDTKQSMLETIKKEQLSISQVSVDEEMVNLIKFQSGYAANAKVITAIDRMIDTLLGIKQ 606



 Score = 44.5 bits (103), Expect = 0.005,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 40/111 (36%), Gaps = 9/111 (8%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M  +++S + + +GL    + + +   NI+NA         + Y R+ +  +       G
Sbjct: 1   MGGILSSLNTSYTGLQAHQSMVDVTGNNISNASD-------EFYSRQRVIAKPQAAYMYG 53

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
            +   +GVD        D            +  N     E + ++E +  +
Sbjct: 54  TKNVNMGVDVEAIERVHDEFVFARYTKANYE--NTYYDTEFSHLKEASAYF 102


>gi|146307869|ref|YP_001188334.1| flagellar hook protein FlgE [Pseudomonas mendocina ymp]
 gi|145576070|gb|ABP85602.1| flagellar basal body FlaE domain protein [Pseudomonas mendocina
           ymp]
          Length = 438

 Score = 51.0 bits (120), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 26/64 (40%)

Query: 68  VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
                 V     G   A  +G ++  NV +  +  ++    R Y AN +TI+    +  T
Sbjct: 374 QSGEPVVGTPRAGTLGALQAGALEDSNVELSDQLVNLIVAQRNYQANAKTIETESAITQT 433

Query: 128 TLDL 131
            ++L
Sbjct: 434 IINL 437



 Score = 36.8 bits (83), Expect = 1.1,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 17/39 (43%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          S +I  SGL   +  + +   NIANA T G       + 
Sbjct: 2  SFNIGLSGLRAATKDLNVTGNNIANAGTAGFKQSRAEFA 40


>gi|217032694|ref|ZP_03438180.1| hypothetical protein HPB128_202g28 [Helicobacter pylori B128]
 gi|298735878|ref|YP_003728403.1| flagellar hook-associated protein 1 FlgK [Helicobacter pylori B8]
 gi|216945624|gb|EEC24275.1| hypothetical protein HPB128_202g28 [Helicobacter pylori B128]
 gi|298355067|emb|CBI65939.1| flagellar hook-associated protein 1 FlgK [Helicobacter pylori B8]
          Length = 606

 Score = 51.0 bits (120), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 21/122 (17%), Positives = 35/122 (28%), Gaps = 4/122 (3%)

Query: 16  AVQSARMQIISEN--IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTF 73
                 +  I+ N  +AN          D Y  K       +         KI  D    
Sbjct: 485 TAIRPWLAPINGNFDVANMMQQLQYDSVDFYNDKFDIKPMKISEFYQFLTGKINTDAEKS 544

Query: 74  VEEFDPGHPV--ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
               D    +        +    V+V  E  ++ +    Y AN + I     M+ T L +
Sbjct: 545 GRILDTKKSMLETIKKEQLSISQVSVDEEMVNLIKFQSGYAANAKVISAIDRMIDTLLGI 604

Query: 132 LR 133
            +
Sbjct: 605 KQ 606



 Score = 44.5 bits (103), Expect = 0.004,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 40/111 (36%), Gaps = 9/111 (8%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M  +++S + + +GL    + + +   NI+NA         + Y R+ +  +       G
Sbjct: 1   MGGILSSLNTSYTGLQAHQSMVDVTGNNISNASD-------EFYSRQRVIAKPQAAYMYG 53

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
            +   +GVD        D            +  N     E + ++E +  +
Sbjct: 54  TKNVNMGVDVEAIERVHDEFVFSRYTKANYE--NTYYDTEFSHLKEASAYF 102


>gi|220934394|ref|YP_002513293.1| flagellar basal body FlaE domain protein [Thioalkalivibrio sp.
           HL-EbGR7]
 gi|219995704|gb|ACL72306.1| flagellar basal body FlaE domain protein [Thioalkalivibrio sp.
           HL-EbGR7]
          Length = 408

 Score = 51.0 bits (120), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 26/56 (46%)

Query: 76  EFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           E D G+     +G ++  NV++  +   +    R + AN Q I  +  +  T +++
Sbjct: 352 EADTGNFGLIQAGGLESSNVDIAEQLVKLITAQRNFQANAQVITTADAVTQTIINI 407



 Score = 33.3 bits (74), Expect = 10.0,   Method: Composition-based stats.
 Identities = 13/38 (34%), Positives = 18/38 (47%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
             A SGL   SA +++   NIAN+ TTG       + 
Sbjct: 3  FRTALSGLNAASADLRVTGNNIANSGTTGFKQSRAEFA 40


>gi|218700421|ref|YP_002408050.1| flagellar hook protein FlgE [Escherichia coli IAI39]
 gi|218370407|emb|CAR18214.1| flagellar hook protein [Escherichia coli IAI39]
          Length = 400

 Score = 51.0 bits (120), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 44/114 (38%), Gaps = 20/114 (17%)

Query: 18  QSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEF 77
           Q+  + I+  N AN      + G + +     S   ++  +G                  
Sbjct: 306 QTQLLGIVLANFANNEGLA-SEGDNVWSATQSSGVALLGTAGT----------------- 347

Query: 78  DPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             G+     +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 348 --GNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 399



 Score = 35.6 bits (80), Expect = 2.3,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 4/63 (6%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          +   A SGL   +  + +I  NIAN+ T G   G+  +               GV+V  I
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFA----DMFAGSKVGLGVKVAGI 57

Query: 67 GVD 69
            D
Sbjct: 58 TQD 60


>gi|170681389|ref|YP_001742373.1| lateral flagellar hook protein LfgE [Escherichia coli SMS-3-5]
 gi|170519107|gb|ACB17285.1| lateral flagellar hook protein LfgE [Escherichia coli SMS-3-5]
          Length = 400

 Score = 51.0 bits (120), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 16/83 (19%), Positives = 30/83 (36%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
           T   E  +    G    + G   +  +     G     +SG+++  NV++  E  ++   
Sbjct: 316 TFPNENGLEAVSGTAWVQTGESGTPLIGVPGSGSCGTLSSGVLESSNVDITSELVNLMTA 375

Query: 108 NRLYMANLQTIKQSHDMMTTTLD 130
            R Y AN + I  S  +      
Sbjct: 376 QRNYQANTKVIATSTQLDDALFQ 398



 Score = 33.7 bits (75), Expect = 8.3,   Method: Composition-based stats.
 Identities = 14/32 (43%), Positives = 18/32 (56%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDT 38
          S  IA +GL   + ++  IS NIANA T G  
Sbjct: 2  SYEIAATGLNAVNEQLDGISNNIANAGTVGYK 33


>gi|300722682|ref|YP_003711972.1| flagellar hook protein [Xenorhabdus nematophila ATCC 19061]
 gi|139522504|gb|ABO77656.1| FlgE [Xenorhabdus nematophila]
 gi|297629189|emb|CBJ89785.1| flagellar biosynthesis; hook protein [Xenorhabdus nematophila ATCC
           19061]
          Length = 398

 Score = 51.0 bits (120), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 36/83 (43%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +  E +   G     + G   S+ +     G+     SG ++  NV++  E  +M  + 
Sbjct: 315 FANPEGLAAQGDNVWAESGASGSSVIGVAGSGNLGNLISGALEASNVDMSQELVNMIVSQ 374

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y +N QTIK    ++ T + +
Sbjct: 375 RNYQSNAQTIKTQDQILQTLVSM 397


>gi|254227983|ref|ZP_04921413.1| Flagellar hook protein FlgE [Vibrio sp. Ex25]
 gi|262396035|ref|YP_003287888.1| flagellar hook protein FlgE [Vibrio sp. Ex25]
 gi|151939479|gb|EDN58307.1| Flagellar hook protein FlgE [Vibrio sp. Ex25]
 gi|262339629|gb|ACY53423.1| flagellar hook protein FlgE [Vibrio sp. Ex25]
          Length = 398

 Score = 50.6 bits (119), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 17/105 (16%), Positives = 30/105 (28%), Gaps = 5/105 (4%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQS-----TFVEEFDPGHPVAN 85
           N              +  +   +  +  G  +V      QS             G     
Sbjct: 292 NGMVYATYTNGQSQLQGQVVLADFANTQGLAKVSGTAWTQSFSSGAPITGVPGSGTLGDL 351

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             G ++  NV++  E   +    R Y AN +TI  S  +     +
Sbjct: 352 TPGALEGSNVDLTSELVALMTAQRNYQANAKTISTSDKLTQALFN 396



 Score = 41.0 bits (94), Expect = 0.055,   Method: Composition-based stats.
 Identities = 23/62 (37%), Positives = 26/62 (41%), Gaps = 5/62 (8%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          S +IA SGL   +  +  IS NIANA T G   G     R   S        GGV V  I
Sbjct: 2  SFNIALSGLDATNTELNTISHNIANASTYGFKGG-----RTEFSAVYNGMQPGGVEVASI 56

Query: 67 GV 68
            
Sbjct: 57 SQ 58


>gi|192358786|ref|YP_001982400.1| flagellar hook protein FlgE [Cellvibrio japonicus Ueda107]
 gi|190684951|gb|ACE82629.1| flagellar hook protein FlgE [Cellvibrio japonicus Ueda107]
          Length = 803

 Score = 50.6 bits (119), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 13/79 (16%), Positives = 31/79 (39%)

Query: 53  EVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
           + +  +G     +        +            +G V+  NV++  +  ++    R Y 
Sbjct: 724 DNLKPTGDTMWTQTFESGEAVIGAPGSAQLGNITAGAVEESNVDLSEQLVNLIIAQRNYQ 783

Query: 113 ANLQTIKQSHDMMTTTLDL 131
           AN +TI+ ++    T ++L
Sbjct: 784 ANAKTIETANATTQTIINL 802


>gi|323703190|ref|ZP_08114843.1| flagellar basal-body rod protein FlgF [Desulfotomaculum nigrificans
           DSM 574]
 gi|323531849|gb|EGB21735.1| flagellar basal-body rod protein FlgF [Desulfotomaculum nigrificans
           DSM 574]
          Length = 257

 Score = 50.6 bits (119), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 8/60 (13%), Positives = 28/60 (46%)

Query: 71  STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           +       P      + G ++  NV+ + E  ++    R+Y ++ + ++ S +++  +++
Sbjct: 192 ADPQGTGQPAATTRVSQGWLEKANVDPVQEMINIIPATRIYESSQRLVQISDELLDKSIN 251


>gi|182418417|ref|ZP_02949711.1| flagellar basal-body rod protein FlgG [Clostridium butyricum 5521]
 gi|237666503|ref|ZP_04526488.1| flagellar basal-body rod protein FlgG (Distal rod protein)
           [Clostridium butyricum E4 str. BoNT E BL5262]
 gi|182377799|gb|EDT75343.1| flagellar basal-body rod protein FlgG [Clostridium butyricum 5521]
 gi|237657702|gb|EEP55257.1| flagellar basal-body rod protein FlgG [Clostridium butyricum E4
           str. BoNT E BL5262]
          Length = 379

 Score = 50.6 bits (119), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 22/44 (50%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  NV++  +  DM    R + A+ + I    +++ T   L+R
Sbjct: 336 LEASNVDLTEQFTDMITATRSFQASSKMITTGDEILQTITGLMR 379



 Score = 34.1 bits (76), Expect = 6.9,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 18/41 (43%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          ++   +   SG+ V   ++ +I  NIAN  TT        +
Sbjct: 1  MLRCMYSGISGMKVNQQKLDVIGNNIANVGTTAFKSSRAEF 41


>gi|307719964|ref|YP_003891104.1| flagellar hook protein FlgE [Sulfurimonas autotrophica DSM 16294]
 gi|306978057|gb|ADN08092.1| flagellar hook protein FlgE [Sulfurimonas autotrophica DSM 16294]
          Length = 709

 Score = 50.6 bits (119), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 16/100 (16%), Positives = 33/100 (33%)

Query: 34  TTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
           + G + G         +  E +   GG    +        +            S  ++  
Sbjct: 610 SNGRSFGLAQIGMAKFTNNEGLSTEGGNVYVQTANSGDPIIGTAATAGRGFIQSAALEAS 669

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           NV++      +    R + AN +TI  S  ++ T + L +
Sbjct: 670 NVDLSRALTQLIIIQRGFQANGKTITTSDQLLQTLIGLKQ 709


>gi|127512279|ref|YP_001093476.1| flagellar hook protein FlgE [Shewanella loihica PV-4]
 gi|126637574|gb|ABO23217.1| flagellar basal body FlaE domain protein [Shewanella loihica PV-4]
          Length = 453

 Score = 50.6 bits (119), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 23/129 (17%), Positives = 50/129 (38%), Gaps = 2/129 (1%)

Query: 5   IASAHIANSGLAVQS-ARMQIISENIANAR-TTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
                ++  G  V     +++ ++ + NA  + G T           S E+ +   G   
Sbjct: 324 FEVTELSQDGTTVGRLTNVEVGADGLINASYSNGSTVPLARVALARFSNEQGLTQVGNTS 383

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
            K+          E + G   +  S  ++  NV++  E  D+    R + AN +T++ ++
Sbjct: 384 WKESLDSGPALAGEANSGTFGSIRSSALEQSNVDLTTELVDLISAQRNFQANSRTLEVNN 443

Query: 123 DMMTTTLDL 131
            +  T L +
Sbjct: 444 TLQQTVLQI 452



 Score = 39.5 bits (90), Expect = 0.15,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 18/39 (46%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          S +IA SG+A     +   + NIAN  TTG       + 
Sbjct: 2  SFNIALSGIAAAQKDLNTTANNIANVNTTGFKESRAEFA 40


>gi|225377359|ref|ZP_03754580.1| hypothetical protein ROSEINA2194_03007 [Roseburia inulinivorans DSM
           16841]
 gi|225210784|gb|EEG93138.1| hypothetical protein ROSEINA2194_03007 [Roseburia inulinivorans DSM
           16841]
          Length = 196

 Score = 50.6 bits (119), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 21/45 (46%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             G ++  NVNV+ E   M   +R Y A  + I    + +  T++
Sbjct: 147 QQGCIEGSNVNVVDEMVKMITISRAYQAGQKVINTVDETLDKTVN 191


>gi|221199739|ref|ZP_03572782.1| flagellar basal body protein FlaE [Burkholderia multivorans CGD2M]
 gi|221208656|ref|ZP_03581656.1| flagellar basal body protein FlaE [Burkholderia multivorans CGD2]
 gi|221171467|gb|EEE03914.1| flagellar basal body protein FlaE [Burkholderia multivorans CGD2]
 gi|221179978|gb|EEE12382.1| flagellar basal body protein FlaE [Burkholderia multivorans CGD2M]
          Length = 413

 Score = 50.6 bits (119), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 14/83 (16%), Positives = 30/83 (36%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +    +   GG +  +        +      +        ++  NV++  +  ++    
Sbjct: 331 FNNPNGLVNIGGNQYAETAASGVPQISVPGSTNHGTLQGSALENSNVDLTSQLVNLITAQ 390

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y AN QTIK    +  T ++L
Sbjct: 391 RNYQANAQTIKTQQTVDQTLINL 413


>gi|218703525|ref|YP_002411044.1| lateral flagellar hook FlgE-like protein [Escherichia coli UMN026]
 gi|293403355|ref|ZP_06647446.1| flgE [Escherichia coli FVEC1412]
 gi|300900359|ref|ZP_07118535.1| flagellar hook protein FlgE [Escherichia coli MS 198-1]
 gi|218430622|emb|CAR11488.1| Lateral flagellar hook protein (FlgE-like) [Escherichia coli
           UMN026]
 gi|291429208|gb|EFF02228.1| flgE [Escherichia coli FVEC1412]
 gi|300356127|gb|EFJ71997.1| flagellar hook protein FlgE [Escherichia coli MS 198-1]
          Length = 400

 Score = 50.6 bits (119), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 16/83 (19%), Positives = 29/83 (34%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
           T   E  +    G    + G   +  +     G      SG+++  NV++  E  ++   
Sbjct: 316 TFPNENGLEAVSGTAWVQTGESGTPLIGVPGSGTCGTLTSGVLESSNVDITSELVNLMTA 375

Query: 108 NRLYMANLQTIKQSHDMMTTTLD 130
            R Y AN + I  S  +      
Sbjct: 376 QRNYQANTKVIATSTQLDDALFQ 398



 Score = 33.7 bits (75), Expect = 8.0,   Method: Composition-based stats.
 Identities = 14/32 (43%), Positives = 18/32 (56%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDT 38
          S  IA +GL   + ++  IS NIANA T G  
Sbjct: 2  SYEIAATGLNAVNEQLDGISNNIANAGTVGYK 33


>gi|23092317|gb|AAN08642.1| FlgG [Aeromonas hydrophila]
          Length = 262

 Score = 50.6 bits (119), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 12/82 (14%), Positives = 26/82 (31%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +   G     +     +                G+++  NVNV  E  ++ + +
Sbjct: 179 FVNASGLQPMGENMFVETQSSGAPIQGTAGADGLGVIKQGMLETSNVNVTEELVNLIQAH 238

Query: 109 RLYMANLQTIKQSHDMMTTTLD 130
           R+Y  N   +     MM+  + 
Sbjct: 239 RVYEMNSNVLSAVDGMMSFLIQ 260



 Score = 42.6 bits (98), Expect = 0.020,   Method: Composition-based stats.
 Identities = 19/108 (17%), Positives = 35/108 (32%), Gaps = 6/108 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +  +  I+ +GL  Q   + + S N+ANA T G        + + I  + +         
Sbjct: 1   MNPALWISKTGLDAQQTNIAVTSNNLANASTVG------FKKSRAIYEDLLYQNINQPGG 54

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
           +     +         G  V          NV     + D+  + R Y
Sbjct: 55  RSSADTELPSGLMLGAGAKVVATQKNHSQGNVQTTDNSLDLMISGRGY 102


>gi|323976551|gb|EGB71639.1| fagellar hook-basal body protein [Escherichia coli TW10509]
          Length = 401

 Score = 50.6 bits (119), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 26/51 (50%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +     +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 350 NFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 400



 Score = 35.6 bits (80), Expect = 2.3,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 4/63 (6%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          +   A SGL   +  + +I  NIAN+ T G   G+  +               GV+V  I
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFA----DMFAGSKVGLGVKVAGI 57

Query: 67 GVD 69
            D
Sbjct: 58 TQD 60


>gi|170021358|ref|YP_001726312.1| flagellar basal body rod protein FlgG [Escherichia coli ATCC 8739]
 gi|188494741|ref|ZP_03002011.1| flagellar basal-body rod protein FlgG [Escherichia coli 53638]
 gi|307136860|ref|ZP_07496216.1| flagellar basal body rod protein FlgG [Escherichia coli H736]
 gi|331640715|ref|ZP_08341862.1| flagellar basal-body rod protein FlgG [Escherichia coli H736]
 gi|331671806|ref|ZP_08372602.1| flagellar basal-body rod protein FlgG [Escherichia coli TA280]
 gi|169756286|gb|ACA78985.1| flagellar basal-body rod protein FlgG [Escherichia coli ATCC 8739]
 gi|188489940|gb|EDU65043.1| flagellar basal-body rod protein FlgG [Escherichia coli 53638]
 gi|315616825|gb|EFU97442.1| flagellar basal-body rod protein FlgG [Escherichia coli 3431]
 gi|323181549|gb|EFZ66969.1| flagellar basal-body rod protein FlgG [Escherichia coli 1357]
 gi|331040089|gb|EGI12297.1| flagellar basal-body rod protein FlgG [Escherichia coli H736]
 gi|331070795|gb|EGI42154.1| flagellar basal-body rod protein FlgG [Escherichia coli TA280]
          Length = 261

 Score = 50.6 bits (119), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 10/78 (12%), Positives = 22/78 (28%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +    +   G     +                        ++  NV+++ E   M    
Sbjct: 178 FANPAGLSAEGDNLYLETAASGQPTEGVPGEDGLGTLQDNALEGSNVDIVNEMVAMITVQ 237

Query: 109 RLYMANLQTIKQSHDMMT 126
           R Y  N + +  + DM+ 
Sbjct: 238 RAYEMNAKMVSAADDMLQ 255



 Score = 39.1 bits (89), Expect = 0.22,   Method: Composition-based stats.
 Identities = 15/42 (35%), Positives = 23/42 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          + A+  I+ +GL+ Q A M  I+ NIAN  TTG       ++
Sbjct: 1  MNAALWISKTGLSAQDAEMSAIANNIANVNTTGFKRDRVMFQ 42


>gi|323975930|gb|EGB71024.1| fagellar hook-basal body protein [Escherichia coli TW10509]
          Length = 400

 Score = 50.6 bits (119), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 16/83 (19%), Positives = 30/83 (36%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
           T   E  +    G    + G   +  +     G     +SG+++  NV++  E  ++   
Sbjct: 316 TFPNENGLEAVSGTAWVQTGESGTPLIGVPGSGTCGTLSSGVLESSNVDITSELVNLMTA 375

Query: 108 NRLYMANLQTIKQSHDMMTTTLD 130
            R Y AN + I  S  +      
Sbjct: 376 QRNYQANTKVIATSTQLDDALFQ 398



 Score = 33.7 bits (75), Expect = 8.1,   Method: Composition-based stats.
 Identities = 14/32 (43%), Positives = 18/32 (56%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDT 38
          S  IA +GL   + ++  IS NIANA T G  
Sbjct: 2  SYEIAATGLNAVNEQLDGISNNIANAGTVGYK 33


>gi|315122284|ref|YP_004062773.1| flagellar hook protein FlgE [Candidatus Liberibacter solanacearum
           CLso-ZC1]
 gi|313495686|gb|ADR52285.1| flagellar hook protein FlgE [Candidatus Liberibacter solanacearum
           CLso-ZC1]
          Length = 422

 Score = 50.6 bits (119), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 36/106 (33%), Gaps = 3/106 (2%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGG-VRVKKIGVDQSTFVEEFDPGHPVANA--S 87
           N     D     P  R  I+     +          +    S  +    PG+       S
Sbjct: 317 NIDVIYDDGTRVPVYRLAIATVPSENSLKICDGNTYLPTRDSGDISIGYPGNDQRGDVLS 376

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  NV++  E  ++ E  R Y AN +  +   D M   + L R
Sbjct: 377 GALETANVDIANELTELIEAQRNYAANSKVFQTGSDFMDILISLKR 422



 Score = 47.9 bits (112), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 42/115 (36%), Gaps = 6/115 (5%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             ++ +   A SG+  QS R+  +S+NIAN  T G    +  +           H SGGV
Sbjct: 1   MGILGTMKTAMSGMDAQSNRVSAVSDNIANVNTIGYKRTAVSFSSLVFPPAAGCHTSGGV 60

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRL--YMAN 114
            V +  +  S         H  +N    ++     V+ +        R   +  N
Sbjct: 61  AVSEKDMISSQGSLI----HTASNTDLAIQGEGFFVVKDKTGTHYLTRSGNFQIN 111


>gi|293408367|ref|ZP_06652206.1| conserved hypothetical protein [Escherichia coli B354]
 gi|291471545|gb|EFF14028.1| conserved hypothetical protein [Escherichia coli B354]
          Length = 400

 Score = 50.6 bits (119), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 16/83 (19%), Positives = 29/83 (34%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
           T   E  +    G    + G   +  +     G      SG+++  NV++  E  ++   
Sbjct: 316 TFPNENGLEAVSGTAWVQTGESGTPLIGVPGSGTCGTLTSGVLESSNVDITSELVNLMTA 375

Query: 108 NRLYMANLQTIKQSHDMMTTTLD 130
            R Y AN + I  S  +      
Sbjct: 376 QRNYQANTKVIATSTQLDDALFQ 398



 Score = 33.7 bits (75), Expect = 8.0,   Method: Composition-based stats.
 Identities = 14/32 (43%), Positives = 18/32 (56%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDT 38
          S  IA +GL   + ++  IS NIANA T G  
Sbjct: 2  SYEIAATGLNAVNEQLDGISNNIANAGTVGYK 33


>gi|261839850|gb|ACX99615.1| flagellar hook-associated protein FlgK [Helicobacter pylori 52]
          Length = 606

 Score = 50.6 bits (119), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 21/119 (17%), Positives = 37/119 (31%), Gaps = 4/119 (3%)

Query: 19  SARMQIISEN--IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEE 76
            + +  I+ N  +AN          D Y  K    +  +         KI  D       
Sbjct: 488 RSWLAPINGNFDVANMMQQLQYDSVDFYNDKFDVKQMKISEFYQFLTGKINTDAEKSGRI 547

Query: 77  FDPGHPV--ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            D    +        +    V+V  E  ++ +    Y AN + I     M+ T L + +
Sbjct: 548 LDTKKSMLETIKKEQLSISQVSVDEEMVNLIKFQSGYAANAKVITAIDRMIDTLLGIKQ 606



 Score = 45.2 bits (105), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 40/111 (36%), Gaps = 9/111 (8%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M  +++S + + +GL    + + +   NI+NA     +      + +        + + G
Sbjct: 1   MGGILSSLNASYTGLQAHQSMVDVTGNNISNASDEFYSRQRVIAKPQEAYMYGTKNVNMG 60

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
           V V+ I      FV               V Y N     E + ++E +  +
Sbjct: 61  VDVEAIERVHDEFVFSRYTK---------VNYENTYYDTEFSHLKEASAYF 102


>gi|221639495|ref|YP_002525757.1| Flagellar hook protein FlgE [Rhodobacter sphaeroides KD131]
 gi|221160276|gb|ACM01256.1| Flagellar hook protein FlgE [Rhodobacter sphaeroides KD131]
          Length = 423

 Score = 50.6 bits (119), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 12/84 (14%), Positives = 31/84 (36%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
           T +  + +   G                           +G +++ NV++  E   +   
Sbjct: 338 TFANPQALRQLGASGFAATADSGQPVAGTAGDSGFGIIRAGALEHANVDLTEELVHLITA 397

Query: 108 NRLYMANLQTIKQSHDMMTTTLDL 131
            R Y A+ + ++ S+ +M T +++
Sbjct: 398 QRNYQASAKAMETSNSLMQTIMNI 421


>gi|190891944|ref|YP_001978486.1| flagellar basal body rod protein [Rhizobium etli CIAT 652]
 gi|190697223|gb|ACE91308.1| probable flagellar basal body rod protein [Rhizobium etli CIAT 652]
          Length = 100

 Score = 50.6 bits (119), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 23/133 (17%), Positives = 44/133 (33%), Gaps = 33/133 (24%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             +    +IA SG+  Q+ R+  I+ N+AN+ T+G    +          + ++  +   
Sbjct: 1   MSISGITNIALSGMRAQATRIGAIANNVANSSTSGYARLNTGLTSTEPGVQAIVEPTT-- 58

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
                                           +V+   E  +M E  + Y AN    +  
Sbjct: 59  -------------------------------SDVDPATELTEMIEAEQAYKANAAVFETG 87

Query: 122 HDMMTTTLDLLRD 134
            DM    + + RD
Sbjct: 88  ADMWEMLMSIKRD 100


>gi|331645418|ref|ZP_08346522.1| LfgE [Escherichia coli M605]
 gi|331045580|gb|EGI17706.1| LfgE [Escherichia coli M605]
          Length = 400

 Score = 50.6 bits (119), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 16/83 (19%), Positives = 30/83 (36%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
           T   E  +    G    + G   +  +     G     +SG+++  NV++  E  ++   
Sbjct: 316 TFPNENGLEAVSGTAWVQTGESGTPLIGVPGSGTCGTLSSGVLESSNVDITSELVNLMTA 375

Query: 108 NRLYMANLQTIKQSHDMMTTTLD 130
            R Y AN + I  S  +      
Sbjct: 376 QRNYQANTKVIATSTQLDDALFQ 398



 Score = 33.7 bits (75), Expect = 8.0,   Method: Composition-based stats.
 Identities = 14/32 (43%), Positives = 18/32 (56%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDT 38
          S  IA +GL   + ++  IS NIANA T G  
Sbjct: 2  SYEIAATGLNAVNEQLDGISNNIANAGTVGYK 33


>gi|283834453|ref|ZP_06354194.1| flagellar basal-body rod protein FlgG [Citrobacter youngae ATCC
           29220]
 gi|291070000|gb|EFE08109.1| flagellar basal-body rod protein FlgG [Citrobacter youngae ATCC
           29220]
          Length = 261

 Score = 50.6 bits (119), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 11/78 (14%), Positives = 23/78 (29%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +    +   G     +                      G ++  NV+++ E   M    
Sbjct: 178 FANPAGLSAEGDNLYLETAASGQPTEGIPGEDGLGTLQDGALEGSNVDIVNEMVAMITVQ 237

Query: 109 RLYMANLQTIKQSHDMMT 126
           R Y  N + +  + DM+ 
Sbjct: 238 RAYEMNAKMVSAADDMLQ 255



 Score = 39.5 bits (90), Expect = 0.17,   Method: Composition-based stats.
 Identities = 15/42 (35%), Positives = 23/42 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          + A+  I+ +GL+ Q A M  I+ NIAN  TTG       ++
Sbjct: 1  MNAALWISKTGLSAQDAEMSAIANNIANVNTTGFKRDRVMFQ 42


>gi|296282277|ref|ZP_06860275.1| flagellar basal body rod protein FlgG [Citromicrobium bathyomarinum
           JL354]
          Length = 262

 Score = 50.6 bits (119), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 13/101 (12%), Positives = 31/101 (30%)

Query: 30  ANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGI 89
           A      +       +    +    +   G   + +     +  +     G       G+
Sbjct: 160 ATINGESEPTELGQIQIARFTNPSGLQAIGDNFLAETAASGAAELGIAGEGGRGQIRQGM 219

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           ++  NVN++ E   M E  R Y  + + +    +M+     
Sbjct: 220 LEGSNVNIVEELVAMIEAQRAYEISSKMVSAVDEMLRNANQ 260



 Score = 39.5 bits (90), Expect = 0.16,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 24/60 (40%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           ++  +A +GL  Q ARM++I+ N+AN  TTG       +         V          
Sbjct: 3  TSALQVARTGLEAQDARMRVIANNLANVGTTGFKRDRANFATLAYQDARVAGQKSSGETA 62


>gi|212634348|ref|YP_002310873.1| flagellar hook protein FlgE [Shewanella piezotolerans WP3]
 gi|212555832|gb|ACJ28286.1| Flagellar basal body rod protein FlaE [Shewanella piezotolerans
           WP3]
          Length = 453

 Score = 50.6 bits (119), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 19/113 (16%), Positives = 43/113 (38%), Gaps = 1/113 (0%)

Query: 20  ARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQST-FVEEFD 78
             +++ ++ + NA  +  +              E      G    K  +D       E +
Sbjct: 340 TNVEVGADGLINASYSNGSTVPLARVALVRFANEQGLSQAGNTSWKASLDSGPALAGEAN 399

Query: 79  PGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G   +  S  ++  NV++  E  D+    R + AN +T++ ++ +  T L +
Sbjct: 400 SGTFGSIRSSALEQSNVDLTTELVDLISAQRNFQANSRTLEVNNTLQQTVLQI 452



 Score = 37.5 bits (85), Expect = 0.59,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 18/39 (46%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          S +IA SG++     +   + NIAN  TTG       + 
Sbjct: 2  SFNIALSGISSAQKDLNTTANNIANVNTTGFKESRAEFA 40


>gi|292492363|ref|YP_003527802.1| flagellar basal body FlaE domain protein [Nitrosococcus halophilus
           Nc4]
 gi|291580958|gb|ADE15415.1| flagellar basal body FlaE domain protein [Nitrosococcus halophilus
           Nc4]
          Length = 425

 Score = 50.6 bits (119), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 18/127 (14%), Positives = 40/127 (31%), Gaps = 13/127 (10%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           +    I+ +G         +I  N +N +                  E+ +   G     
Sbjct: 311 LTGLDISETG---------VIRANFSNGQNLA----LGKVALAQFPNEQGLRQLGNNSWA 357

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
                 +    E   G       G ++  NV++  E   +    R + AN + I+ +  +
Sbjct: 358 GTIDSGAAIAGEAGNGSFGLIQGGALESSNVDLTAELVHLITAQRNFQANARAIETASTL 417

Query: 125 MTTTLDL 131
             + L++
Sbjct: 418 TDSILNI 424



 Score = 39.5 bits (90), Expect = 0.17,   Method: Composition-based stats.
 Identities = 14/39 (35%), Positives = 21/39 (53%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          S + + SGL   S+ + ++S NIANA TTG       + 
Sbjct: 2  SFNTSLSGLNAASSDLDVVSNNIANANTTGFKRSRAEFA 40


>gi|207091983|ref|ZP_03239770.1| flagellar basal body rod protein FlgC [Helicobacter pylori
          HPKX_438_AG0C1]
          Length = 89

 Score = 50.6 bits (119), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 21/50 (42%), Positives = 29/50 (58%), Gaps = 1/50 (2%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE 53
           ++S  I+  GL+ Q  R  +IS NIANA TT  + G  PYRR+   F+ 
Sbjct: 2  FLSSFDISGYGLSAQRLRANLISSNIANANTTRTSEG-GPYRRQEAVFKA 50


>gi|77463652|ref|YP_353156.1| flagellar hook protein FlgE [Rhodobacter sphaeroides 2.4.1]
 gi|77388070|gb|ABA79255.1| flagellar hook protein FlgE [Rhodobacter sphaeroides 2.4.1]
          Length = 423

 Score = 50.6 bits (119), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 12/84 (14%), Positives = 31/84 (36%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
           T +  + +   G                           +G +++ NV++  E   +   
Sbjct: 338 TFANPQALRQLGASGFAATADSGQPVAGTAGDSGFGIIRAGALEHANVDLTEELVHLITA 397

Query: 108 NRLYMANLQTIKQSHDMMTTTLDL 131
            R Y A+ + ++ S+ +M T +++
Sbjct: 398 QRNYQASAKAMETSNSLMQTIMNI 421


>gi|315453407|ref|YP_004073677.1| flagellar hook protein FlgE [Helicobacter felis ATCC 49179]
 gi|315132459|emb|CBY83087.1| flagellar hook protein, FlgE [Helicobacter felis ATCC 49179]
          Length = 601

 Score = 50.6 bits (119), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 18/45 (40%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NVN      ++    R Y  N +      D++   ++L R
Sbjct: 557 YLETSNVNAGHSLTNLILMQRGYSMNAKAFTTGDDLIKEAINLKR 601


>gi|301645413|ref|ZP_07245354.1| flagellar hook protein FlgE [Escherichia coli MS 146-1]
 gi|307136858|ref|ZP_07496214.1| flagellar basal body FlaE domain-containing protein [Escherichia
           coli H736]
 gi|331640713|ref|ZP_08341860.1| LfgE [Escherichia coli H736]
 gi|301076297|gb|EFK91103.1| flagellar hook protein FlgE [Escherichia coli MS 146-1]
 gi|315616827|gb|EFU97444.1| flgE [Escherichia coli 3431]
 gi|323181547|gb|EFZ66967.1| flgE [Escherichia coli 1357]
 gi|331040087|gb|EGI12295.1| LfgE [Escherichia coli H736]
          Length = 400

 Score = 50.6 bits (119), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 16/83 (19%), Positives = 30/83 (36%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
           T   E  +    G    + G   +  +     G     +SG+++  NV++  E  ++   
Sbjct: 316 TFPNENGLEAVSGTAWVQTGESGTPLIGVPGSGTCGTLSSGVLESSNVDITSELVNLMTA 375

Query: 108 NRLYMANLQTIKQSHDMMTTTLD 130
            R Y AN + I  S  +      
Sbjct: 376 QRNYQANTKVIATSTQLDDALFQ 398



 Score = 33.7 bits (75), Expect = 8.1,   Method: Composition-based stats.
 Identities = 14/32 (43%), Positives = 18/32 (56%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDT 38
          S  IA +GL   + ++  IS NIANA T G  
Sbjct: 2  SYEIAATGLNAVNEQLDGISNNIANAGTVGYK 33


>gi|256020228|ref|ZP_05434093.1| flagellar basal body FlaE domain-containing protein [Shigella sp.
           D9]
 gi|332281390|ref|ZP_08393803.1| lateral flagellar hook protein [Shigella sp. D9]
 gi|332103742|gb|EGJ07088.1| lateral flagellar hook protein [Shigella sp. D9]
          Length = 400

 Score = 50.6 bits (119), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 16/83 (19%), Positives = 30/83 (36%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
           T   E  +    G    + G   +  +     G     +SG+++  NV++  E  ++   
Sbjct: 316 TFPNENGLEAVSGTAWVQTGESGTPLIGVPGSGTCGTLSSGVLESSNVDITSELVNLMTA 375

Query: 108 NRLYMANLQTIKQSHDMMTTTLD 130
            R Y AN + I  S  +      
Sbjct: 376 QRNYQANTKVIATSTQLDDALFQ 398



 Score = 33.7 bits (75), Expect = 8.1,   Method: Composition-based stats.
 Identities = 14/32 (43%), Positives = 18/32 (56%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDT 38
          S  IA +GL   + ++  IS NIANA T G  
Sbjct: 2  SYEIAATGLNAVNEQLDGISNNIANAGTVGYK 33


>gi|78485812|ref|YP_391737.1| hypothetical protein Tcr_1471 [Thiomicrospira crunogena XCL-2]
 gi|78364098|gb|ABB42063.1| Flagellar hook protein FlgE [Thiomicrospira crunogena XCL-2]
          Length = 538

 Score = 50.6 bits (119), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 18/83 (21%), Positives = 34/83 (40%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            + +  +   GG    +     +  +   +     +  +G ++Y NV+   E   M +T 
Sbjct: 456 FNDKNALEKLGGQSYAESFASGAVQIGTSERNGYGSINAGALEYSNVDTAGELVHMIQTQ 515

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y A+ Q I+ S  +  T L L
Sbjct: 516 RTYQASAQVIQTSQTLTQTILQL 538



 Score = 38.3 bits (87), Expect = 0.32,   Method: Composition-based stats.
 Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 2/60 (3%)

Query: 10 IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVD 69
           A SGL   S  + +IS N+ANA+T G       +    + +        GVRV  I  D
Sbjct: 8  TAVSGLNAASQGLGVISNNLANAQTMGYKSSRAEFS--DMFYGAQSTPGNGVRVDSITQD 65


>gi|170683341|ref|YP_001744104.1| flagellar hook protein FlgE [Escherichia coli SMS-3-5]
 gi|300938641|ref|ZP_07153370.1| flagellar hook protein FlgE [Escherichia coli MS 21-1]
 gi|170521059|gb|ACB19237.1| flagellar hook protein FlgE [Escherichia coli SMS-3-5]
 gi|300456426|gb|EFK19919.1| flagellar hook protein FlgE [Escherichia coli MS 21-1]
          Length = 401

 Score = 50.6 bits (119), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 26/51 (50%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +     +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 350 NFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 400



 Score = 35.6 bits (80), Expect = 2.4,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 4/63 (6%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          +   A SGL   +  + +I  NIAN+ T G   G+  +               GV+V  I
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFA----DMFAGSKVGLGVKVAGI 57

Query: 67 GVD 69
            D
Sbjct: 58 TQD 60


>gi|77463650|ref|YP_353154.1| flagellar distal rod protein [Rhodobacter sphaeroides 2.4.1]
 gi|126462482|ref|YP_001043596.1| flagellar basal-body rod protein FlgG [Rhodobacter sphaeroides ATCC
           17029]
 gi|221639493|ref|YP_002525755.1| Flagellar basal-body rod protein FlgG [Rhodobacter sphaeroides
           KD131]
 gi|332558506|ref|ZP_08412828.1| FlgG [Rhodobacter sphaeroides WS8N]
 gi|11095160|gb|AAG29749.1|AF205139_1 flagellar distal rod protein [Rhodobacter sphaeroides]
 gi|77388068|gb|ABA79253.1| Flagellar distal rod protein [Rhodobacter sphaeroides 2.4.1]
 gi|126104146|gb|ABN76824.1| flagellar basal-body rod protein FlgG [Rhodobacter sphaeroides ATCC
           17029]
 gi|221160274|gb|ACM01254.1| Flagellar basal-body rod protein FlgG [Rhodobacter sphaeroides
           KD131]
 gi|332276218|gb|EGJ21533.1| FlgG [Rhodobacter sphaeroides WS8N]
          Length = 262

 Score = 50.6 bits (119), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 31/83 (37%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
           T +    +   G     + G      +             G ++  NVNV+ E  DM ET
Sbjct: 178 TFANPRGLQPVGETFAVETGASGEAVIGNPVEPGFGKLVQGSLEASNVNVVQELVDMIET 237

Query: 108 NRLYMANLQTIKQSHDMMTTTLD 130
            R Y  N ++I  S +MM    +
Sbjct: 238 QRAYEVNSKSISASDEMMQYLSN 260



 Score = 44.9 bits (104), Expect = 0.004,   Method: Composition-based stats.
 Identities = 16/40 (40%), Positives = 23/40 (57%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
            + H+A++GL  Q  RMQ+IS N+AN  TTG       +
Sbjct: 3  TNAMHVASTGLNAQQTRMQVISNNLANVNTTGFKRDRANF 42


>gi|254470088|ref|ZP_05083492.1| flagellar hook protein [Pseudovibrio sp. JE062]
 gi|211960399|gb|EEA95595.1| flagellar hook protein [Pseudovibrio sp. JE062]
          Length = 561

 Score = 50.6 bits (119), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 16/103 (15%), Positives = 40/103 (38%), Gaps = 2/103 (1%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           N         S    +  ++     H     RV      +++   E D  +     +  +
Sbjct: 461 NVIGKYSNDKSQKLFKIPVATFAAEHELQ--RVDGAAFSETSTSGEPDFRNGGTIRAKAL 518

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  N ++  E + +  T + Y AN + +  ++ M+ + L+++R
Sbjct: 519 ESSNADIAKEFSKLIITQQAYSANSKVLSTANQMLDSVLNIVR 561



 Score = 36.4 bits (82), Expect = 1.4,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 35/65 (53%), Gaps = 7/65 (10%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            +  + + A +GL  QS  ++ IS N+AN+ TTG       Y+R   SF +++  +G  
Sbjct: 1  MSIYGAINSATTGLDAQSKALENISGNVANSSTTG-------YKRLDTSFSDLVSSTGSR 53

Query: 62 RVKKI 66
          + +++
Sbjct: 54 QAEQV 58


>gi|331671804|ref|ZP_08372600.1| LfgE [Escherichia coli TA280]
 gi|331070793|gb|EGI42152.1| LfgE [Escherichia coli TA280]
          Length = 400

 Score = 50.6 bits (119), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 16/83 (19%), Positives = 29/83 (34%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
           T   E  +    G    + G   +  +     G      SG+++  NV++  E  ++   
Sbjct: 316 TFPNENGLEAVSGTAWVQTGESGTPLIGVPGSGTCGTLTSGVLESSNVDITSELVNLMTA 375

Query: 108 NRLYMANLQTIKQSHDMMTTTLD 130
            R Y AN + I  S  +      
Sbjct: 376 QRNYQANTKVIATSTQLDDALFQ 398



 Score = 33.7 bits (75), Expect = 8.5,   Method: Composition-based stats.
 Identities = 14/32 (43%), Positives = 18/32 (56%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDT 38
          S  IA +GL   + ++  IS NIANA T G  
Sbjct: 2  SYEIAATGLNAVNEQLDGISNNIANAGTVGYK 33


>gi|323191538|gb|EFZ76799.1| flgE [Escherichia coli RN587/1]
          Length = 400

 Score = 50.6 bits (119), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 16/83 (19%), Positives = 30/83 (36%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
           T   E  +    G    + G   +  +     G     +SG+++  NV++  E  ++   
Sbjct: 316 TFPNENGLEAVSGTAWVQTGESGTPLIGVPGSGTCGTLSSGVLESSNVDITSELVNLMTA 375

Query: 108 NRLYMANLQTIKQSHDMMTTTLD 130
            R Y AN + I  S  +      
Sbjct: 376 QRNYQANTKVIATSTQLDDALFQ 398



 Score = 33.7 bits (75), Expect = 8.4,   Method: Composition-based stats.
 Identities = 14/32 (43%), Positives = 18/32 (56%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDT 38
          S  IA +GL   + ++  IS NIANA T G  
Sbjct: 2  SYEIAATGLNAVNEQLDGISNNIANAGTVGYK 33


>gi|332558508|ref|ZP_08412830.1| FlgE [Rhodobacter sphaeroides WS8N]
 gi|12057218|gb|AAF14370.2|AF133240_4 flagellar hook protein FlgE [Rhodobacter sphaeroides]
 gi|332276220|gb|EGJ21535.1| FlgE [Rhodobacter sphaeroides WS8N]
          Length = 423

 Score = 50.6 bits (119), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 12/84 (14%), Positives = 31/84 (36%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
           T +  + +   G                           +G +++ NV++  E   +   
Sbjct: 338 TFANPQALRQLGASGFAATADSGQPVAGTAGDSGFGIIRAGALEHANVDLTEELVHLITA 397

Query: 108 NRLYMANLQTIKQSHDMMTTTLDL 131
            R Y A+ + ++ S+ +M T +++
Sbjct: 398 QRNYQASAKAMETSNSLMQTIMNI 421


>gi|295096225|emb|CBK85315.1| fagellar hook-basal body proteins [Enterobacter cloacae subsp.
           cloacae NCTC 9394]
          Length = 402

 Score = 50.6 bits (119), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 26/51 (50%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +     +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 351 NFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401



 Score = 35.6 bits (80), Expect = 2.5,   Method: Composition-based stats.
 Identities = 18/63 (28%), Positives = 25/63 (39%), Gaps = 4/63 (6%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          +   A SGL   +  + +I  NIAN+ T G   GS  +               GV+V  I
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGSASFA----DMFAGSKVGLGVKVAGI 57

Query: 67 GVD 69
            D
Sbjct: 58 TQD 60


>gi|126462484|ref|YP_001043598.1| flagellar basal body FlaE domain-containing protein [Rhodobacter
           sphaeroides ATCC 17029]
 gi|126104148|gb|ABN76826.1| flagellar basal body FlaE domain protein [Rhodobacter sphaeroides
           ATCC 17029]
          Length = 423

 Score = 50.6 bits (119), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 12/84 (14%), Positives = 31/84 (36%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
           T +  + +   G                           +G +++ NV++  E   +   
Sbjct: 338 TFANPQALRQLGASGFAATADSGQPVAGTAGDSGFGIIRAGALEHANVDLTEELVHLITA 397

Query: 108 NRLYMANLQTIKQSHDMMTTTLDL 131
            R Y A+ + ++ S+ +M T +++
Sbjct: 398 QRNYQASAKAMETSNSLMQTIMNI 421


>gi|239907793|ref|YP_002954534.1| flagellar basal-body rod protein FlgG [Desulfovibrio magneticus
           RS-1]
 gi|239797659|dbj|BAH76648.1| flagellar basal-body rod protein FlgG [Desulfovibrio magneticus
           RS-1]
          Length = 261

 Score = 50.6 bits (119), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 25/51 (49%)

Query: 82  PVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
               A G ++ PNV V+ E   M ET R + A  + +  S+++ T  + + 
Sbjct: 207 TTEVAQGFLEKPNVEVVEEMVSMIETQRTFEAYQKVMSSSNELDTKAIRVG 257


>gi|300936126|ref|ZP_07151065.1| flagellar hook protein FlgE [Escherichia coli MS 21-1]
 gi|300458704|gb|EFK22197.1| flagellar hook protein FlgE [Escherichia coli MS 21-1]
          Length = 400

 Score = 50.6 bits (119), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 16/83 (19%), Positives = 30/83 (36%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
           T   E  +    G    + G   +  +     G     +SG+++  NV++  E  ++   
Sbjct: 316 TFPNENGLEAVSGTAWVQTGESGTPLIGVPGSGTCGTLSSGVLESSNVDITSELVNLMTA 375

Query: 108 NRLYMANLQTIKQSHDMMTTTLD 130
            R Y AN + I  S  +      
Sbjct: 376 QRNYQANTKVIATSTQLDDALFQ 398



 Score = 34.1 bits (76), Expect = 7.5,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 23/54 (42%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          S  IA +GL   + ++  IS NIANA T G    +  +       + +     G
Sbjct: 2  SYEIAATGLNAVNEQLDGISNNIANAGTVGYKSMTTQFSAMYAGSQAMGVSMAG 55


>gi|324007916|gb|EGB77135.1| flagellar hook protein FlgE [Escherichia coli MS 57-2]
          Length = 401

 Score = 50.6 bits (119), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 26/51 (50%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +     +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 350 NFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 400



 Score = 35.6 bits (80), Expect = 2.5,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 4/63 (6%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          +   A SGL   +  + +I  NIAN+ T G   G+  +               GV+V  I
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFA----DMFAGSKVGLGVKVAGI 57

Query: 67 GVD 69
            D
Sbjct: 58 TQD 60


>gi|329898289|ref|ZP_08272372.1| Flagellar hook protein flgE [gamma proteobacterium IMCC3088]
 gi|328920854|gb|EGG28297.1| Flagellar hook protein flgE [gamma proteobacterium IMCC3088]
          Length = 975

 Score = 50.6 bits (119), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 12/77 (15%), Positives = 27/77 (35%)

Query: 55  MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
           +   G                E          +G  +  NV++  E  ++    R + AN
Sbjct: 897 LRQVGNSGFVASSESGEARQGEPGSAGFGTIRAGATERSNVDLTAELVNLITAQRNFQAN 956

Query: 115 LQTIKQSHDMMTTTLDL 131
            + I+ S  + +T +++
Sbjct: 957 AKAIETSSTLTSTIINM 973



 Score = 34.1 bits (76), Expect = 6.3,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 19/38 (50%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          S + + +GL   +  + + S NIAN+ T G    S  +
Sbjct: 2  SFYTSLTGLNAATTELSVTSNNIANSATAGFKRSSASF 39


>gi|323190588|gb|EFZ75860.1| flagellar hook protein flgE [Escherichia coli RN587/1]
          Length = 401

 Score = 50.6 bits (119), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 26/51 (50%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +     +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 350 NFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 400



 Score = 34.8 bits (78), Expect = 3.6,   Method: Composition-based stats.
 Identities = 18/63 (28%), Positives = 25/63 (39%), Gaps = 4/63 (6%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          +   A SGL   +  + II  NIAN+ T G   G+  +               GV+V  I
Sbjct: 2  AFSQAVSGLNAAATNLDIIGNNIANSATYGFKSGTASFA----DMFAGSKVGLGVKVAGI 57

Query: 67 GVD 69
            D
Sbjct: 58 TQD 60


>gi|217034660|ref|ZP_03440065.1| hypothetical protein HP9810_901g7 [Helicobacter pylori 98-10]
 gi|216942868|gb|EEC22359.1| hypothetical protein HP9810_901g7 [Helicobacter pylori 98-10]
          Length = 606

 Score = 50.6 bits (119), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 21/119 (17%), Positives = 35/119 (29%), Gaps = 4/119 (3%)

Query: 19  SARMQIISEN--IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEE 76
              +  I+ N  +AN          D Y  K       +         KI  D       
Sbjct: 488 RPWLAPINGNFDVANMMQQLQYDSVDFYNDKFDIKPMKISEFYQFLTGKINTDAEKSGRI 547

Query: 77  FDPGHPV--ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            D    +        +    V+V  E  ++ +    Y AN + I     M+ T L + +
Sbjct: 548 LDTKKSMLETIKKEQLSISQVSVDEEMVNLIKFQSGYAANAKVISTIDRMIDTLLGIKQ 606



 Score = 43.7 bits (101), Expect = 0.008,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 40/111 (36%), Gaps = 9/111 (8%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M  +++S + + +GL    + + +   NI+NA         + Y R+ +  +       G
Sbjct: 1   MGGILSSLNASYTGLQAHQSMVDVTGNNISNASD-------EFYSRQRVIAKPQEAYMYG 53

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
            +   +GVD        D            +  N     E + ++E +  +
Sbjct: 54  TKNVNMGVDVEAIERVHDEFVFSRYTKANYE--NTYYDTEFSHLKEASAYF 102


>gi|324113871|gb|EGC07845.1| fagellar hook-basal body protein [Escherichia fergusonii B253]
 gi|325497616|gb|EGC95475.1| flagellar hook protein FlgE [Escherichia fergusonii ECD227]
          Length = 401

 Score = 50.6 bits (119), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 26/51 (50%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +     +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 350 NFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 400



 Score = 35.6 bits (80), Expect = 2.6,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 4/63 (6%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          +   A SGL   +  + +I  NIAN+ T G   G+  +               GV+V  I
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFA----DMFAGSKVGLGVKVAGI 57

Query: 67 GVD 69
            D
Sbjct: 58 TQD 60


>gi|319409187|emb|CBI82831.1| Flagellar basal-body rod protein flgG [Bartonella schoenbuchensis
           R1]
          Length = 264

 Score = 50.6 bits (119), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 15/96 (15%), Positives = 32/96 (33%), Gaps = 5/96 (5%)

Query: 35  TGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVAN-----ASGI 89
                   P     ++    ++  G   V      ++       PG P  +        +
Sbjct: 161 YQTDMDPTPVEAGRLNLVNFVNAVGLEAVGDNLFRETPASGAPVPGFPKDDGYGGIMQAM 220

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           ++  NV+ + E  ++    R Y  N + I+ S +M 
Sbjct: 221 LESSNVDPVKEITELIAAQRSYEMNSKVIQASDEMA 256



 Score = 42.9 bits (99), Expect = 0.016,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 21/41 (51%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          + S  IA +G+A Q   + +I+ N+AN  TTG       + 
Sbjct: 3  MRSLSIAATGMAAQQTNLDVIANNLANINTTGFKRARAEFA 43


>gi|206896555|ref|YP_002246691.1| flagellar hook protein FlgE [Coprothermobacter proteolyticus DSM
           5265]
 gi|206739172|gb|ACI18250.1| flagellar hook protein FlgE [Coprothermobacter proteolyticus DSM
           5265]
          Length = 519

 Score = 50.6 bits (119), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 23/47 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NV++  E  ++  T R + A+ + I  S ++    + L R
Sbjct: 473 RGALESSNVDLAEEFTNLIITQRGFQASTRVITTSDEVTQDIIGLKR 519



 Score = 39.1 bits (89), Expect = 0.21,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 19/41 (46%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          ++ S     SGL V   R+ +IS NIAN  TT        +
Sbjct: 1  MLRSFFNGISGLKVHQIRIDVISNNIANVNTTAYKAARATF 41


>gi|28900122|ref|NP_799777.1| flagellar hook protein FlgE [Vibrio parahaemolyticus RIMD 2210633]
 gi|153837072|ref|ZP_01989739.1| flagellar hook protein FlgE [Vibrio parahaemolyticus AQ3810]
 gi|260365772|ref|ZP_05778268.1| flagellar hook protein FlgE [Vibrio parahaemolyticus K5030]
 gi|260880694|ref|ZP_05893049.1| flagellar hook protein FlgE [Vibrio parahaemolyticus AN-5034]
 gi|260897700|ref|ZP_05906196.1| flagellar hook protein FlgE [Vibrio parahaemolyticus Peru-466]
 gi|260899389|ref|ZP_05907784.1| flagellar hook protein FlgE [Vibrio parahaemolyticus AQ4037]
 gi|28808405|dbj|BAC61610.1| LfgE [Vibrio parahaemolyticus RIMD 2210633]
 gi|149749660|gb|EDM60405.1| flagellar hook protein FlgE [Vibrio parahaemolyticus AQ3810]
 gi|308086228|gb|EFO35923.1| flagellar hook protein FlgE [Vibrio parahaemolyticus Peru-466]
 gi|308092098|gb|EFO41793.1| flagellar hook protein FlgE [Vibrio parahaemolyticus AN-5034]
 gi|308109176|gb|EFO46716.1| flagellar hook protein FlgE [Vibrio parahaemolyticus AQ4037]
 gi|308114990|gb|EFO52530.1| flagellar hook protein FlgE [Vibrio parahaemolyticus K5030]
 gi|328470101|gb|EGF41012.1| flagellar hook protein FlgE [Vibrio parahaemolyticus 10329]
          Length = 398

 Score = 50.6 bits (119), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 17/105 (16%), Positives = 31/105 (29%), Gaps = 5/105 (4%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQS-----TFVEEFDPGHPVAN 85
           N              +  +   +  +  G  +V      QS       +     G     
Sbjct: 292 NGMVYATYTNGQSQLQGQVVLADFANTQGLAKVSGTAWTQSFSSGAPIMGVPGSGTLGNL 351

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             G ++  NV++  E   +    R Y AN +TI  S  +     +
Sbjct: 352 TPGALEGSNVDLTSELVALMTAQRNYQANAKTISTSDKLTQALFN 396



 Score = 39.5 bits (90), Expect = 0.15,   Method: Composition-based stats.
 Identities = 15/40 (37%), Positives = 19/40 (47%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR 46
          S +IA SGL   +  +  IS NIANA T G       +  
Sbjct: 2  SFNIALSGLDATNTELNTISHNIANASTYGFKGARTEFAA 41


>gi|301051140|ref|ZP_07197970.1| flagellar hook protein FlgE [Escherichia coli MS 185-1]
 gi|300297161|gb|EFJ53546.1| flagellar hook protein FlgE [Escherichia coli MS 185-1]
          Length = 401

 Score = 50.6 bits (119), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 26/51 (50%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +     +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 350 NFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 400



 Score = 35.2 bits (79), Expect = 2.7,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 4/63 (6%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          +   A SGL   +  + +I  NIAN+ T G   G+  +               GV+V  I
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFA----DMFAGSKVGLGVKVAGI 57

Query: 67 GVD 69
            D
Sbjct: 58 TQD 60


>gi|170021360|ref|YP_001726314.1| flagellar basal body FlaE domain-containing protein [Escherichia
           coli ATCC 8739]
 gi|169756288|gb|ACA78987.1| flagellar basal body FlaE domain protein [Escherichia coli ATCC
           8739]
          Length = 400

 Score = 50.6 bits (119), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 16/83 (19%), Positives = 30/83 (36%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
           T   E  +    G    + G   +  +     G     +SG+++  NV++  E  ++   
Sbjct: 316 TFPNENGLEAVSGTAWVQTGESGTPLIGVPGSGTCGTLSSGVLESSNVDITSELVNLMTA 375

Query: 108 NRLYMANLQTIKQSHDMMTTTLD 130
            R Y AN + I  S  +      
Sbjct: 376 QRNYQANTKVIATSTQLDDALFQ 398



 Score = 33.7 bits (75), Expect = 8.9,   Method: Composition-based stats.
 Identities = 14/32 (43%), Positives = 18/32 (56%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDT 38
          S  IA +GL   + ++  IS NIANA T G  
Sbjct: 2  SYEIAATGLNAVNEQLDGISNNIANAGTVGYK 33


>gi|188494513|ref|ZP_03001783.1| Flagellar basal body protein FlgE [Escherichia coli 53638]
 gi|188489712|gb|EDU64815.1| Flagellar basal body protein FlgE [Escherichia coli 53638]
          Length = 400

 Score = 50.6 bits (119), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 16/83 (19%), Positives = 30/83 (36%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
           T   E  +    G    + G   +  +     G     +SG+++  NV++  E  ++   
Sbjct: 316 TFPNENGLEAVSGTAWVQTGESGTPLIGVPGSGTCGTLSSGVLESSNVDITSELVNLMTA 375

Query: 108 NRLYMANLQTIKQSHDMMTTTLD 130
            R Y AN + I  S  +      
Sbjct: 376 QRNYQANTKVIATSTQLDDALFQ 398



 Score = 33.7 bits (75), Expect = 8.8,   Method: Composition-based stats.
 Identities = 14/32 (43%), Positives = 18/32 (56%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDT 38
          S  IA +GL   + ++  IS NIANA T G  
Sbjct: 2  SYEIAATGLNAVNEQLDGISNNIANAGTVGYK 33


>gi|317180851|dbj|BAJ58637.1| flagellar hook-associated protein FlgK [Helicobacter pylori F32]
          Length = 606

 Score = 50.6 bits (119), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 21/119 (17%), Positives = 35/119 (29%), Gaps = 4/119 (3%)

Query: 19  SARMQIISEN--IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEE 76
              +  I+ N  +AN          D Y  K       +         KI  D       
Sbjct: 488 RPWLAPINGNFDVANMMQQLQYDSVDFYNDKFDIKPMKISEFYQFLTGKINTDAEKSGRI 547

Query: 77  FDPGHPV--ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            D    +        +    V+V  E  ++ +    Y AN + I     M+ T L + +
Sbjct: 548 LDTKKSMLETIKKEQLSISQVSVDEEMVNLIKFQSGYAANAKVISTIDRMIDTLLGIKQ 606



 Score = 43.7 bits (101), Expect = 0.009,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 40/111 (36%), Gaps = 9/111 (8%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M  +++S + + +GL    + + +   NI+NA         + Y R+ +  +       G
Sbjct: 1   MGGILSSLNASYTGLQAHQSMVDVTGNNISNASD-------EFYSRQRVIAKPQEAYMYG 53

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
            +   +GVD        D            +  N     E + ++E +  +
Sbjct: 54  TKNVNMGVDVEAIERVHDEFVFSRYTKANYE--NTYYDTEFSHLKEASAYF 102


>gi|300817270|ref|ZP_07097488.1| flagellar hook protein FlgE [Escherichia coli MS 107-1]
 gi|307313519|ref|ZP_07593140.1| fagellar hook-basal body protein [Escherichia coli W]
 gi|300530246|gb|EFK51308.1| flagellar hook protein FlgE [Escherichia coli MS 107-1]
 gi|306906687|gb|EFN37198.1| fagellar hook-basal body protein [Escherichia coli W]
 gi|315059542|gb|ADT73869.1| flagellar hook protein [Escherichia coli W]
 gi|323171064|gb|EFZ56713.1| flgE [Escherichia coli LT-68]
 gi|323379899|gb|ADX52167.1| fagellar hook-basal body protein [Escherichia coli KO11]
          Length = 400

 Score = 50.6 bits (119), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 16/83 (19%), Positives = 30/83 (36%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
           T   E  +    G    + G   +  +     G     +SG+++  NV++  E  ++   
Sbjct: 316 TFPNENGLEAVSGTAWVQTGESGTPLIGVPGSGTCGTLSSGVLESSNVDITSELVNLMTA 375

Query: 108 NRLYMANLQTIKQSHDMMTTTLD 130
            R Y AN + I  S  +      
Sbjct: 376 QRNYQANTKVIATSTQLDDALFQ 398



 Score = 33.7 bits (75), Expect = 9.0,   Method: Composition-based stats.
 Identities = 14/32 (43%), Positives = 18/32 (56%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDT 38
          S  IA +GL   + ++  IS NIANA T G  
Sbjct: 2  SYEIAATGLNAVNEQLDGISNNIANAGTVGYK 33


>gi|167945179|ref|ZP_02532253.1| hypothetical protein Epers_01140 [Endoriftia persephone
           'Hot96_1+Hot96_2']
          Length = 126

 Score = 50.6 bits (119), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 43/128 (33%), Gaps = 5/128 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIA-NARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
           +  +  + N   +V      I+S   A N   T        Y       E +        
Sbjct: 1   MQPAMTVPNDATSVTIGSDGIVSVLQAGNTDPTQIGQIELAYFANPQGLEPIGDNLFRES 60

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
               GV+ +                G ++  NVNV+ E  +M ET R Y  N + I  + 
Sbjct: 61  AASGGVNTA----IPGSDSTGTLMQGALESSNVNVVEELVNMIETQRAYEMNSKAISTTD 116

Query: 123 DMMTTTLD 130
           +M++   +
Sbjct: 117 EMLSYINN 124


>gi|285018207|ref|YP_003375918.1| flagellar basal-body rod protein flgg [Xanthomonas albilineans GPE
           PC73]
 gi|283473425|emb|CBA15930.1| probable flagellar basal-body rod protein flgg [Xanthomonas
           albilineans]
          Length = 261

 Score = 50.6 bits (119), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 15/82 (18%), Positives = 25/82 (30%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +  +G     +                      G ++  NVNV+ E   M ET 
Sbjct: 178 FINPSGLQATGQNLYVETAASGPAQSGTPGLNGLGTTVQGALEGSNVNVVEELVSMIETQ 237

Query: 109 RLYMANLQTIKQSHDMMTTTLD 130
           R Y  N + I  +  M+    +
Sbjct: 238 RAYEMNAKAISTTDAMLGYLNN 259



 Score = 41.8 bits (96), Expect = 0.030,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 21/41 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  +  +A +G+  Q  RM ++S N+AN  TTG       +
Sbjct: 1  MNQALWVAKTGMDAQQTRMSVVSNNLANTSTTGFKRDRASF 41


>gi|332187911|ref|ZP_08389644.1| flagellar hook-basal body s family protein [Sphingomonas sp. S17]
 gi|332012072|gb|EGI54144.1| flagellar hook-basal body s family protein [Sphingomonas sp. S17]
          Length = 430

 Score = 50.6 bits (119), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 17/103 (16%), Positives = 37/103 (35%)

Query: 29  IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASG 88
           I  + + G+T         T      +   G    +  G+  +      + G   A  S 
Sbjct: 326 ITASFSNGETAALGKVAVATFVNMPGLRQEGNSYWEATGMSGAAKFGTANEGAYGAIRSS 385

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            ++  NV++  E  ++    R + AN + +  S  +  T  ++
Sbjct: 386 TIEGSNVDITEELVNLIAAQRNFQANAKALDTSSQISQTIFNI 428



 Score = 33.7 bits (75), Expect = 9.9,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 22/68 (32%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          S + + SGL      M +IS N+AN  T G       +     +               +
Sbjct: 2  SFYTSLSGLQASQTDMSVISHNLANVGTNGFKKSRAEFADVMAANFSTDPFKQVGSGTVV 61

Query: 67 GVDQSTFV 74
            ++  F 
Sbjct: 62 KANRQEFK 69


>gi|331666546|ref|ZP_08367420.1| LfgE [Escherichia coli TA271]
 gi|331065770|gb|EGI37654.1| LfgE [Escherichia coli TA271]
          Length = 400

 Score = 50.6 bits (119), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 16/83 (19%), Positives = 30/83 (36%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
           T   E  +    G    + G   +  +     G     +SG+++  NV++  E  ++   
Sbjct: 316 TFPNENGLEAVSGTAWVQTGESGTPLIGVPGSGTCGTLSSGVLESSNVDITSELVNLMTA 375

Query: 108 NRLYMANLQTIKQSHDMMTTTLD 130
            R Y AN + I  S  +      
Sbjct: 376 QRNYQANTKVIATSTQLDDALFQ 398



 Score = 33.7 bits (75), Expect = 9.0,   Method: Composition-based stats.
 Identities = 14/32 (43%), Positives = 18/32 (56%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDT 38
          S  IA +GL   + ++  IS NIANA T G  
Sbjct: 2  SYEIAATGLNAVNEQLDGISNNIANAGTVGYK 33


>gi|212637785|ref|YP_002314310.1| flagellar hook protein FlgE [Shewanella piezotolerans WP3]
 gi|212559269|gb|ACJ31723.1| Flagellar basal body rod protein FlaE [Shewanella piezotolerans
           WP3]
          Length = 402

 Score = 50.6 bits (119), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 23/59 (38%)

Query: 72  TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             V     G   + ASG ++  NV+   E   +    R Y +N + +  +  M    L+
Sbjct: 342 PIVGTPTTGTLGSVASGYLEGSNVDTTAEMVSLMTAQRNYQSNAKVLDANSTMQQALLN 400



 Score = 38.3 bits (87), Expect = 0.40,   Method: Composition-based stats.
 Identities = 15/38 (39%), Positives = 20/38 (52%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          S +IA SGL   +  +  IS NIAN+ T G   G   +
Sbjct: 2  SFNIALSGLQATTQDLNTISNNIANSSTVGFRSGRSEF 39


>gi|59889780|emb|CAH19136.1| Lateral flagellar hook protein (FlgE-like) [Escherichia coli]
 gi|284920044|emb|CBG33101.1| lateral flagellar hook protein (FlgE-like) [Escherichia coli 042]
          Length = 400

 Score = 50.6 bits (119), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 16/83 (19%), Positives = 30/83 (36%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
           T   E  +    G    + G   +  +     G     +SG+++  NV++  E  ++   
Sbjct: 316 TFPNENGLEAVSGTAWVQTGESGTPLIGVPGSGTCGTLSSGVLESSNVDITSELVNLMTA 375

Query: 108 NRLYMANLQTIKQSHDMMTTTLD 130
            R Y AN + I  S  +      
Sbjct: 376 QRNYQANTKVIATSTQLDDALFQ 398



 Score = 33.7 bits (75), Expect = 9.0,   Method: Composition-based stats.
 Identities = 14/32 (43%), Positives = 18/32 (56%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDT 38
          S  IA +GL   + ++  IS NIANA T G  
Sbjct: 2  SYEIAATGLNAVNEQLDGISNNIANAGTVGYK 33


>gi|261821153|ref|YP_003259259.1| flagellar hook protein FlgE [Pectobacterium wasabiae WPP163]
 gi|261605166|gb|ACX87652.1| fagellar hook-basal body protein [Pectobacterium wasabiae WPP163]
          Length = 405

 Score = 50.3 bits (118), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 21/41 (51%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NV++  E  +M    R Y +N QTIK    ++ T + L
Sbjct: 364 ESSNVDLSKELVNMIVAQRNYQSNAQTIKTQDSILQTLVSL 404



 Score = 36.4 bits (82), Expect = 1.4,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 24/63 (38%), Gaps = 4/63 (6%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
              A SGL   S  + +I  NIAN+ T G   G+  +               GV+V  +
Sbjct: 2  GFSQAVSGLNAASNNLDVIGNNIANSATVGFKSGAVTFA----DMFAGSKVGMGVKVASV 57

Query: 67 GVD 69
            D
Sbjct: 58 LQD 60


>gi|170758330|ref|YP_001787958.1| flagellar basal body rod protein FlgG [Clostridium botulinum A3
           str. Loch Maree]
 gi|169405319|gb|ACA53730.1| flagellar basal body rod protein [Clostridium botulinum A3 str.
           Loch Maree]
          Length = 263

 Score = 50.3 bits (118), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 19/116 (16%), Positives = 40/116 (34%), Gaps = 3/116 (2%)

Query: 21  RMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEE---F 77
           R+   S N  N    G     D      +  +  ++ + G              +E    
Sbjct: 148 RIGGFSRNNINIAEDGSISVKDIDGINKMVGKINIYNAVGSDAFVSIGRNLYIPQEGVNV 207

Query: 78  DPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
              + V+   G ++  NV+   E  +M  T R +  + + IK + +M     ++ +
Sbjct: 208 FANNDVSILQGFLENSNVDAGKEMTEMIITQRAFELSSRGIKTADEMWGIVNNMRK 263



 Score = 39.9 bits (91), Expect = 0.12,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 20/42 (47%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ +   + SGL  Q  ++  IS N+AN  T G       ++
Sbjct: 1  MLRALWNSKSGLIAQQNKLDSISNNLANVNTVGYKREDVSFQ 42


>gi|332305616|ref|YP_004433467.1| flagellar basal-body rod protein FlgF [Glaciecola agarilytica
           4H-3-7+YE-5]
 gi|332172945|gb|AEE22199.1| flagellar basal-body rod protein FlgF [Glaciecola agarilytica
           4H-3-7+YE-5]
          Length = 247

 Score = 50.3 bits (118), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 26/48 (54%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            +G+++  NVN + E  DM    R Y   ++ +K++ D+ +    LLR
Sbjct: 198 RNGMLEGSNVNPVEEMVDMISLQRHYEMQVKFMKEASDLDSRANQLLR 245


>gi|331005445|ref|ZP_08328824.1| Flagellar hook protein FlgE [gamma proteobacterium IMCC1989]
 gi|330420721|gb|EGG95008.1| Flagellar hook protein FlgE [gamma proteobacterium IMCC1989]
          Length = 400

 Score = 50.3 bits (118), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 14/74 (18%), Positives = 30/74 (40%)

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           G  +  +  +Q   + +           G ++  NV +  E  D+    R + A+ Q + 
Sbjct: 325 GNGIFLVSNEQQPIIGKGSSDIFGDLVGGSIEISNVELTQEFTDLIIIQRGFQASSQIMS 384

Query: 120 QSHDMMTTTLDLLR 133
            S++M+   L + R
Sbjct: 385 ASNEMIQELLSVGR 398


>gi|188534170|ref|YP_001907967.1| flagellar hook protein FlgE [Erwinia tasmaniensis Et1/99]
 gi|188029212|emb|CAO97084.1| Flagellar biosynthesis, hook protein [Erwinia tasmaniensis Et1/99]
          Length = 402

 Score = 50.3 bits (118), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 26/51 (50%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +     +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 351 NLGTLTAGALESSNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401


>gi|22126390|ref|NP_669813.1| flagellar hook protein FlgE [Yersinia pestis KIM 10]
 gi|45441409|ref|NP_992948.1| flagellar hook protein FlgE [Yersinia pestis biovar Microtus str.
           91001]
 gi|51596011|ref|YP_070202.1| flagellar hook protein FlgE [Yersinia pseudotuberculosis IP 32953]
 gi|108807173|ref|YP_651089.1| flagellar hook protein FlgE [Yersinia pestis Antiqua]
 gi|108812483|ref|YP_648250.1| flagellar hook protein FlgE [Yersinia pestis Nepal516]
 gi|145598610|ref|YP_001162686.1| flagellar hook protein FlgE [Yersinia pestis Pestoides F]
 gi|149366251|ref|ZP_01888286.1| flagellar hook protein FlgE [Yersinia pestis CA88-4125]
 gi|153950658|ref|YP_001401290.1| flagellar hook protein FlgE [Yersinia pseudotuberculosis IP 31758]
 gi|162421636|ref|YP_001606473.1| flagellar hook protein FlgE [Yersinia pestis Angola]
 gi|165925992|ref|ZP_02221824.1| flagellar hook protein FlgE [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165938693|ref|ZP_02227248.1| flagellar hook protein FlgE [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|166010935|ref|ZP_02231833.1| flagellar hook protein FlgE [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166210871|ref|ZP_02236906.1| flagellar hook protein FlgE [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167401045|ref|ZP_02306548.1| flagellar hook protein FlgE [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167420383|ref|ZP_02312136.1| flagellar hook protein FlgE [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167425748|ref|ZP_02317501.1| flagellar hook protein FlgE [Yersinia pestis biovar Mediaevalis
           str. K1973002]
 gi|170024647|ref|YP_001721152.1| flagellar hook protein FlgE [Yersinia pseudotuberculosis YPIII]
 gi|186895114|ref|YP_001872226.1| flagellar hook protein FlgE [Yersinia pseudotuberculosis PB1/+]
 gi|218928922|ref|YP_002346797.1| flagellar hook protein FlgE [Yersinia pestis CO92]
 gi|229896242|ref|ZP_04511412.1| flagellar hook protein FlgE [Yersinia pestis Pestoides A]
 gi|229897177|ref|ZP_04512333.1| flagellar hook protein FlgE [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229897903|ref|ZP_04513054.1| flagellar hook protein FlgE [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229902865|ref|ZP_04517982.1| flagellar hook protein FlgE [Yersinia pestis Nepal516]
 gi|270486645|ref|ZP_06203719.1| flagellar hook protein FlgE [Yersinia pestis KIM D27]
 gi|294504030|ref|YP_003568092.1| flagellar hook protein [Yersinia pestis Z176003]
 gi|21959376|gb|AAM86064.1|AE013853_12 hook protein [Yersinia pestis KIM 10]
 gi|45436269|gb|AAS61825.1| flagellar hook protein FlgE [Yersinia pestis biovar Microtus str.
           91001]
 gi|51589293|emb|CAH20914.1| flagellar hook protein FlgE [Yersinia pseudotuberculosis IP 32953]
 gi|108776131|gb|ABG18650.1| flagellar hook protein FlgE [Yersinia pestis Nepal516]
 gi|108779086|gb|ABG13144.1| flagellar hook protein FlgE [Yersinia pestis Antiqua]
 gi|115347533|emb|CAL20442.1| flagellar hook protein FlgE [Yersinia pestis CO92]
 gi|145210306|gb|ABP39713.1| flagellar hook protein FlgE [Yersinia pestis Pestoides F]
 gi|149292664|gb|EDM42738.1| flagellar hook protein FlgE [Yersinia pestis CA88-4125]
 gi|152962153|gb|ABS49614.1| flagellar hook protein FlgE [Yersinia pseudotuberculosis IP 31758]
 gi|162354451|gb|ABX88399.1| flagellar hook protein FlgE [Yersinia pestis Angola]
 gi|165913307|gb|EDR31929.1| flagellar hook protein FlgE [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|165922196|gb|EDR39373.1| flagellar hook protein FlgE [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165990279|gb|EDR42580.1| flagellar hook protein FlgE [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166208051|gb|EDR52531.1| flagellar hook protein FlgE [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|166962078|gb|EDR58099.1| flagellar hook protein FlgE [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167049434|gb|EDR60842.1| flagellar hook protein FlgE [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167055147|gb|EDR64944.1| flagellar hook protein FlgE [Yersinia pestis biovar Mediaevalis
           str. K1973002]
 gi|169751181|gb|ACA68699.1| flagellar basal body FlaE domain protein [Yersinia
           pseudotuberculosis YPIII]
 gi|186698140|gb|ACC88769.1| flagellar basal body FlaE domain protein [Yersinia
           pseudotuberculosis PB1/+]
 gi|229680312|gb|EEO76411.1| flagellar hook protein FlgE [Yersinia pestis Nepal516]
 gi|229688944|gb|EEO81009.1| flagellar hook protein FlgE [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229693514|gb|EEO83563.1| flagellar hook protein FlgE [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229701165|gb|EEO89194.1| flagellar hook protein FlgE [Yersinia pestis Pestoides A]
 gi|262361784|gb|ACY58505.1| flagellar hook protein [Yersinia pestis D106004]
 gi|262366080|gb|ACY62637.1| flagellar hook protein [Yersinia pestis D182038]
 gi|270335149|gb|EFA45926.1| flagellar hook protein FlgE [Yersinia pestis KIM D27]
 gi|294354489|gb|ADE64830.1| flagellar hook protein [Yersinia pestis Z176003]
 gi|320015467|gb|ADV99038.1| flagellar hook protein FlgE [Yersinia pestis biovar Medievalis str.
           Harbin 35]
          Length = 428

 Score = 50.3 bits (118), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 33/83 (39%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            S  E +   G    K+     +  +     G      SG ++  NV++  E  +M    
Sbjct: 345 FSNPEGLSSEGDNVWKETQSSGNPTLGTAGSGGFGTLTSGALESSNVDLSKELVNMIVAQ 404

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y +N QTIK    ++ T + L
Sbjct: 405 RNYQSNAQTIKTQDQILQTLVSL 427



 Score = 36.0 bits (81), Expect = 1.6,   Method: Composition-based stats.
 Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 4/63 (6%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
              A SG+   S+ + +I  NIAN+ T+G   GS  +               GV+V  I
Sbjct: 2  GFSQAVSGMNAASSNLDVIGNNIANSATSGFKAGSVSFA----DMFAGSQTGMGVKVAGI 57

Query: 67 GVD 69
            D
Sbjct: 58 TQD 60


>gi|326404069|ref|YP_004284151.1| flagellar basal-body rod protein FlgG [Acidiphilium multivorum
           AIU301]
 gi|325050931|dbj|BAJ81269.1| flagellar basal-body rod protein FlgG [Acidiphilium multivorum
           AIU301]
          Length = 260

 Score = 50.3 bits (118), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 17/84 (20%), Positives = 29/84 (34%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
               +  +   GG    +     +                G V+  NVNV+ E  D+   
Sbjct: 177 VFPNDAGLAAQGGNLFLQTAASGNPVTGAPSAPGFGTVMQGFVENSNVNVVSEVTDLITA 236

Query: 108 NRLYMANLQTIKQSHDMMTTTLDL 131
            R Y  N Q +  ++ M++T   L
Sbjct: 237 QRAYDMNSQVVTATNQMLSTLTQL 260



 Score = 41.0 bits (94), Expect = 0.050,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 22/41 (53%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          + +  IA +G+  Q   +++IS NIAN  TTG       ++
Sbjct: 1  MRALDIAATGMQAQQTNVEVISNNIANMTTTGYKAQRVAFQ 41


>gi|260767923|ref|ZP_05876857.1| flagellar hook protein FlgE [Vibrio furnissii CIP 102972]
 gi|260615953|gb|EEX41138.1| flagellar hook protein FlgE [Vibrio furnissii CIP 102972]
          Length = 398

 Score = 50.3 bits (118), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 17/105 (16%), Positives = 30/105 (28%), Gaps = 5/105 (4%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQS-----TFVEEFDPGHPVAN 85
           N          +   +  +      +  G  +V      QS       V     G     
Sbjct: 292 NGMVYATYTNGESQLQGQVVLANFANPQGLAKVSGTAWTQSFSSGSPTVGVPGTGTLGDL 351

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             G ++  NV++  E   +    R Y AN +TI     +     +
Sbjct: 352 TPGALEGSNVDLTSELVSLMTAQRNYQANAKTISTEDKLTQALFN 396



 Score = 39.9 bits (91), Expect = 0.11,   Method: Composition-based stats.
 Identities = 22/62 (35%), Positives = 25/62 (40%), Gaps = 5/62 (8%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          S +IA SGL   +  +  IS NIANA T G         R   S        GGV V  I
Sbjct: 2  SFNIALSGLDATNTELNTISHNIANASTYGFK-----GARTEFSAVYNGMQPGGVEVASI 56

Query: 67 GV 68
            
Sbjct: 57 SQ 58


>gi|91225873|ref|ZP_01260842.1| flagellar hook protein E [Vibrio alginolyticus 12G01]
 gi|269965424|ref|ZP_06179543.1| flagellar hook protein [Vibrio alginolyticus 40B]
 gi|91189523|gb|EAS75799.1| flagellar hook protein E [Vibrio alginolyticus 12G01]
 gi|269829903|gb|EEZ84133.1| flagellar hook protein [Vibrio alginolyticus 40B]
          Length = 437

 Score = 50.3 bits (118), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 13/84 (15%), Positives = 34/84 (40%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
            +  E+ +   GG +             E + G      +G+++  N+++  E  D+   
Sbjct: 353 RVPNEQGLDKKGGTQWDSTQFSGDKIWGESNKGSFGTINNGMLEQSNIDMTQELVDLISA 412

Query: 108 NRLYMANLQTIKQSHDMMTTTLDL 131
            R + AN ++++  + +    L +
Sbjct: 413 QRNFQANSRSLEVHNQLQQNILQI 436



 Score = 38.7 bits (88), Expect = 0.30,   Method: Composition-based stats.
 Identities = 11/36 (30%), Positives = 16/36 (44%)

Query: 10 IANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ SGL+     +   S NIANA T G       + 
Sbjct: 4  VSLSGLSAAQLDLNTTSNNIANANTYGFKESRAEFA 39


>gi|306813303|ref|ZP_07447496.1| flagellar basal body FlaE domain-containing protein [Escherichia
           coli NC101]
 gi|305854066|gb|EFM54505.1| flagellar basal body FlaE domain-containing protein [Escherichia
           coli NC101]
          Length = 400

 Score = 50.3 bits (118), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 16/83 (19%), Positives = 30/83 (36%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
           T   E  +    G    + G   +  +     G     +SG+++  NV++  E  ++   
Sbjct: 316 TFPNENGLEAVSGTAWVQTGESGTPLIGVPGSGTCGTLSSGVLESSNVDITSELVNLMTA 375

Query: 108 NRLYMANLQTIKQSHDMMTTTLD 130
            R Y AN + I  S  +      
Sbjct: 376 QRNYQANTKVIATSTQLDDALFQ 398



 Score = 33.7 bits (75), Expect = 9.4,   Method: Composition-based stats.
 Identities = 14/32 (43%), Positives = 18/32 (56%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDT 38
          S  IA +GL   + ++  IS NIANA T G  
Sbjct: 2  SYEIAATGLNAVNEQLDGISNNIANAGTVGYK 33


>gi|115353118|ref|YP_774957.1| flagellar hook protein FlgE [Burkholderia ambifaria AMMD]
 gi|115283106|gb|ABI88623.1| flagellar basal body FlaE domain protein [Burkholderia ambifaria
           AMMD]
          Length = 413

 Score = 50.3 bits (118), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 14/83 (16%), Positives = 30/83 (36%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +    +   GG +  +        +      +        ++  NV++  +  ++    
Sbjct: 331 FNNPNGLVNLGGNQYAETAASGVPQISAPGSTNHGTLQGSALENSNVDLTSQLVNLITAQ 390

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y AN QTIK    +  T ++L
Sbjct: 391 RNYQANAQTIKTQQTVDQTLINL 413


>gi|238796904|ref|ZP_04640408.1| Flagellar basal body FlaE domain protein [Yersinia mollaretii ATCC
           43969]
 gi|238719164|gb|EEQ10976.1| Flagellar basal body FlaE domain protein [Yersinia mollaretii ATCC
           43969]
          Length = 407

 Score = 50.3 bits (118), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 22/43 (51%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           ++  NV++  E  +M    R Y +N QTIK   +++    +L 
Sbjct: 365 LEASNVDLSKEMVNMIVYQRNYQSNSQTIKTQSELLQILANLG 407



 Score = 34.1 bits (76), Expect = 7.3,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 26/69 (37%), Gaps = 4/69 (5%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
                SGL   S  + ++  NIAN++T G   GS  +               GV+V  +
Sbjct: 2  GFSQGLSGLNAASQALDVVGNNIANSQTVGFKSGSIAFA----DVFAGSQVGMGVQVSSV 57

Query: 67 GVDQSTFVE 75
            + S  V 
Sbjct: 58 NQNFSDGVL 66


>gi|315179626|gb|ADT86540.1| flagellar hook protein E [Vibrio furnissii NCTC 11218]
          Length = 398

 Score = 50.3 bits (118), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 17/105 (16%), Positives = 30/105 (28%), Gaps = 5/105 (4%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQS-----TFVEEFDPGHPVAN 85
           N          +   +  +      +  G  +V      QS       V     G     
Sbjct: 292 NGMVYATYTNGESQLQGQVVLANFANPQGLAKVSGTAWTQSFSSGSPTVGVPGTGTLGDL 351

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             G ++  NV++  E   +    R Y AN +TI     +     +
Sbjct: 352 TPGALEGSNVDLTSELVSLMTAQRNYQANAKTISTEDKLTQALFN 396



 Score = 39.9 bits (91), Expect = 0.12,   Method: Composition-based stats.
 Identities = 22/62 (35%), Positives = 25/62 (40%), Gaps = 5/62 (8%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          S +IA SGL   +  +  IS NIANA T G         R   S        GGV V  I
Sbjct: 2  SFNIALSGLDATNTELNTISHNIANASTYGFK-----GARTEFSAVYNGMQPGGVEVASI 56

Query: 67 GV 68
            
Sbjct: 57 SQ 58


>gi|260431756|ref|ZP_05785727.1| flagellar hook protein FlgE [Silicibacter lacuscaerulensis
           ITI-1157]
 gi|260415584|gb|EEX08843.1| flagellar hook protein FlgE [Silicibacter lacuscaerulensis
           ITI-1157]
          Length = 439

 Score = 50.3 bits (118), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 21/43 (48%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +    +V  E   M +T R Y ++ + I+   +M+  T ++ R
Sbjct: 397 EESTTDVATELTSMIQTQRAYSSSAKVIQTVDEMLQETTNIKR 439



 Score = 36.8 bits (83), Expect = 0.93,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 28/64 (43%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            + +S +   + L   + R+  IS+NIAN+ T G       +     + +   + +GGV
Sbjct: 9  MTISSSLNAGVAALKANANRLATISDNIANSSTFGYKRVETDFHSMVTAGQGGSYSAGGV 68

Query: 62 RVKK 65
          R   
Sbjct: 69 RTTS 72


>gi|224825777|ref|ZP_03698881.1| flagellar basal body FlaE domain protein [Lutiella nitroferrum
           2002]
 gi|224602001|gb|EEG08180.1| flagellar basal body FlaE domain protein [Lutiella nitroferrum
           2002]
          Length = 399

 Score = 50.3 bits (118), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 17/105 (16%), Positives = 32/105 (30%), Gaps = 5/105 (4%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVAN----- 85
           N                TI+     +  G V V       S          P +      
Sbjct: 293 NGDILATYSNGQKQAVGTIALANFPNEDGLVPVSATSWVDSPASGTALLSAPGSGLAGTL 352

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           ++G ++  NV++  E  ++    R Y AN + I     ++   + 
Sbjct: 353 SAGSLEQSNVDMTAELVNLMSAQRNYQANTKVISTEGQVIQALMQ 397


>gi|332704824|ref|ZP_08424912.1| flagellar basal-body rod protein FlgF [Desulfovibrio africanus str.
           Walvis Bay]
 gi|332554973|gb|EGJ52017.1| flagellar basal-body rod protein FlgF [Desulfovibrio africanus str.
           Walvis Bay]
          Length = 277

 Score = 50.3 bits (118), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 18/98 (18%), Positives = 37/98 (37%), Gaps = 6/98 (6%)

Query: 38  TPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNV 97
             G + Y+         M  S G+     G D +                G ++  NV +
Sbjct: 184 KDGQNLYKLSEDFEANEMAVSPGMPEITTGSDGTPQTRISPVI-----QQGFLESSNVEI 238

Query: 98  LVETADMRETNRLYMANLQTIKQSHDMMTTTL-DLLRD 134
           + E   M E NR++ A  + ++ + DM ++ +  + + 
Sbjct: 239 VTEMVRMIEVNRVFEAYQKIMRGTQDMDSSLIKSMGKS 276


>gi|281178185|dbj|BAI54515.1| flagellar hook protein FlgE [Escherichia coli SE15]
          Length = 401

 Score = 50.3 bits (118), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 26/51 (50%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +     +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 350 NFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 400



 Score = 35.2 bits (79), Expect = 2.8,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 4/63 (6%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          +   A SGL   +  + +I  NIAN+ T G   G+  +               GV+V  I
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFA----DMFAGSKVGLGVKVAGI 57

Query: 67 GVD 69
            D
Sbjct: 58 TQD 60


>gi|146277707|ref|YP_001167866.1| hypothetical protein Rsph17025_1668 [Rhodobacter sphaeroides ATCC
           17025]
 gi|145555948|gb|ABP70561.1| protein of unknown function DUF1078 domain protein [Rhodobacter
           sphaeroides ATCC 17025]
          Length = 251

 Score = 50.3 bits (118), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 24/60 (40%)

Query: 74  VEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
                P        G+++  NVN + E     E  R +  NL+ I  + ++  +   LLR
Sbjct: 189 EPLPAPDQRARILQGVLEGSNVNTMEELVSSIELQRTFELNLRMISAAKELDESGARLLR 248


>gi|103488387|ref|YP_617948.1| protein of unknown function DUF1078-like protein [Sphingopyxis
           alaskensis RB2256]
 gi|98978464|gb|ABF54615.1| protein of unknown function DUF1078-like protein [Sphingopyxis
           alaskensis RB2256]
          Length = 275

 Score = 50.3 bits (118), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 16/87 (18%), Positives = 32/87 (36%)

Query: 45  RRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
              T      +  +G    +  G      ++    G   A  SG ++  NV++  E   +
Sbjct: 188 AMATFPTMSGLRPTGDAHWQSTGESGPPTIDAATNGPMGAIRSGALERSNVDITEELVML 247

Query: 105 RETNRLYMANLQTIKQSHDMMTTTLDL 131
               R + AN + I+ +  +  T + L
Sbjct: 248 MAAQRNFQANAKAIEGASQLTQTIIGL 274



 Score = 34.8 bits (78), Expect = 3.4,   Method: Composition-based stats.
 Identities = 13/30 (43%), Positives = 16/30 (53%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTG 36
          S + + SGL      M +IS NIANA   G
Sbjct: 2  SFYTSLSGLKASQTDMSVISNNIANAGAVG 31


>gi|260853466|ref|YP_003227357.1| putative lateral flagellar hook protein [Escherichia coli O26:H11
           str. 11368]
 gi|260866413|ref|YP_003232815.1| putative lateral flagellar hook protein [Escherichia coli O111:H-
           str. 11128]
 gi|257752115|dbj|BAI23617.1| predicted lateral flagellar hook protein [Escherichia coli O26:H11
           str. 11368]
 gi|257762769|dbj|BAI34264.1| predicted lateral flagellar hook protein [Escherichia coli O111:H-
           str. 11128]
 gi|323158103|gb|EFZ44202.1| hypothetical protein ECEPECA14_0101 [Escherichia coli EPECa14]
 gi|323178494|gb|EFZ64072.1| hypothetical protein ECOK1180_3007 [Escherichia coli 1180]
          Length = 400

 Score = 50.3 bits (118), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 16/83 (19%), Positives = 30/83 (36%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
           T   E  +    G    + G   +  +     G     +SG+++  NV++  E  ++   
Sbjct: 316 TFPNENGLEAVSGTAWVQTGESGTPLIGVPGSGTCGTLSSGVLESSNVDITSELVNLMTA 375

Query: 108 NRLYMANLQTIKQSHDMMTTTLD 130
            R Y AN + I  S  +      
Sbjct: 376 QRNYQANTKVIATSTQLDDALFQ 398



 Score = 33.7 bits (75), Expect = 9.7,   Method: Composition-based stats.
 Identities = 14/32 (43%), Positives = 18/32 (56%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDT 38
          S  IA +GL   + ++  IS NIANA T G  
Sbjct: 2  SYEIAATGLNAVNEQLDGISNNIANAGTVGYK 33


>gi|323706570|ref|ZP_08118123.1| protein of unknown function DUF1078 domain protein
           [Thermoanaerobacterium xylanolyticum LX-11]
 gi|323534077|gb|EGB23875.1| protein of unknown function DUF1078 domain protein
           [Thermoanaerobacterium xylanolyticum LX-11]
          Length = 59

 Score = 50.3 bits (118), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 24/48 (50%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             G ++  NV V+ E  +M    R Y  N + I+ + DM++   +L R
Sbjct: 12  RQGFLETSNVQVVNEMVNMIAAQRAYELNSKAIQAADDMLSIANNLRR 59


>gi|94987189|ref|YP_595122.1| flagellar hook-associated protein [Lawsonia intracellularis
           PHE/MN1-00]
 gi|94731438|emb|CAJ54801.1| Flagellar hook-associated protein [Lawsonia intracellularis
           PHE/MN1-00]
          Length = 705

 Score = 50.3 bits (118), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 17/87 (19%), Positives = 30/87 (34%), Gaps = 2/87 (2%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP--NVNVLVETADMRE 106
            +  + +    G  V  +G D  T     D    ++N           VN+  E   + +
Sbjct: 619 ETTHQTLGAYYGALVGLVGSDTRTAKFNADYNKTLSNELEQQALSITGVNLDEEMTQLIK 678

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
               Y A  + I  +  M+ T L L +
Sbjct: 679 FQHSYTAAAKLITTADQMLQTLLSLKQ 705



 Score = 37.5 bits (85), Expect = 0.69,   Method: Composition-based stats.
 Identities = 17/101 (16%), Positives = 35/101 (34%), Gaps = 1/101 (0%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             +     I  S +A     + +   NIAN  T G +  S  +  +    +       GV
Sbjct: 1   MSINTLFGIGKSAIAGNQTALNVTGNNIANVNTQGYSRQSVRFEDRYGLNQTPGMLGQGV 60

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETA 102
              +I  + + FV E    +  +  +   +   +   +E+ 
Sbjct: 61  HTAEIYRNFNRFV-EDAYLNRFSQNTRWDEQSAIMNSIESI 100


>gi|92114098|ref|YP_574026.1| flagellar basal body FlaE [Chromohalobacter salexigens DSM 3043]
 gi|91797188|gb|ABE59327.1| flagellar basal body FlaE [Chromohalobacter salexigens DSM 3043]
          Length = 387

 Score = 50.3 bits (118), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 20/103 (19%), Positives = 37/103 (35%), Gaps = 1/103 (0%)

Query: 29  IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASG 88
           +AN    G++              E +   G           +  + +   G   +  SG
Sbjct: 285 LANYSN-GNSEAVGTVGMANFRNPEGLEPQGDNLWAATQESGAALLGQAGTGQLGSLESG 343

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            ++  NV++  E  DM    R + AN   I+   D++ T  +L
Sbjct: 344 TLEASNVDLTQELVDMIIAQRNFQANNNAIQTQSDILETVTNL 386


>gi|327393471|dbj|BAK10893.1| flagellar hook protein FlgE [Pantoea ananatis AJ13355]
          Length = 415

 Score = 50.3 bits (118), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 34/83 (40%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            S  E +   G     +        V   + G   +  +G ++  NV++  E  +M    
Sbjct: 332 FSNPEGLKSQGDNVWAETNASGQAAVGLANTGTFGSLTAGALESSNVDMSKELVNMIVAQ 391

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y AN QTIK    ++ T ++L
Sbjct: 392 RNYQANAQTIKTQDQILNTLVNL 414


>gi|319787121|ref|YP_004146596.1| flagellar hook-basal body protein [Pseudoxanthomonas suwonensis
           11-1]
 gi|317465633|gb|ADV27365.1| flagellar hook-basal body protein [Pseudoxanthomonas suwonensis
           11-1]
          Length = 406

 Score = 50.3 bits (118), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 11/83 (13%), Positives = 25/83 (30%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
               + +   G           +      D        +G ++   V++  +  +M    
Sbjct: 323 FVNPQGLQAVGNNMWAATHSSGTPRSGAPDSSDFGRIQAGALEASTVDLTEQLVNMITAQ 382

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R + AN Q I        T +++
Sbjct: 383 RNFQANAQMISTQDQATQTVINI 405



 Score = 34.5 bits (77), Expect = 4.7,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 19/39 (48%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          S + + SG+   +A + + S NIAN+ T G       + 
Sbjct: 2  SFNASLSGINAANADLNVTSNNIANSNTVGFKSSRAEFA 40


>gi|54297182|ref|YP_123551.1| flagellar hook protein FlgE [Legionella pneumophila str. Paris]
 gi|53750967|emb|CAH12378.1| Flagellar hook protein FlgE [Legionella pneumophila str. Paris]
          Length = 437

 Score = 50.3 bits (118), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 15/83 (18%), Positives = 31/83 (37%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +  E +   G     +        +     G      SG ++  NV++  E  ++    
Sbjct: 354 FADPESLQNLGNTNWAETTSSGQPLISAPGSGGLGLINSGRLEESNVDLTSELVNLISAQ 413

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R + AN QTI+    +  T +++
Sbjct: 414 RNFQANAQTIRTGDAITQTIINI 436


>gi|237731007|ref|ZP_04561488.1| flagellar hook protein FlgE [Citrobacter sp. 30_2]
 gi|226906546|gb|EEH92464.1| flagellar hook protein FlgE [Citrobacter sp. 30_2]
          Length = 417

 Score = 50.3 bits (118), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 26/51 (50%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +     +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 366 NFGKLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 416



 Score = 35.6 bits (80), Expect = 2.2,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 4/63 (6%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          +   A SGL   +  + +I  NIAN+ T G   G+  +               GV+V  I
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFA----DMFAGSKVGLGVKVAGI 57

Query: 67 GVD 69
            D
Sbjct: 58 TQD 60


>gi|218508323|ref|ZP_03506201.1| probable flagellar basal body rod protein [Rhizobium etli Brasil 5]
 gi|327191050|gb|EGE58103.1| putative flagellar basal body rod protein [Rhizobium etli CNPAF512]
          Length = 100

 Score = 50.3 bits (118), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 43/133 (32%), Gaps = 33/133 (24%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             +    +IA SG+  Q  R+  I+ N+AN+ T G             +       S   
Sbjct: 1   MSISGITNIALSGMRAQMTRIGAIANNVANSSTPG------------YARLNTSLTSTEP 48

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
            V+ I    +                      +V+   E  +M E  + Y AN    +  
Sbjct: 49  GVQAIVEPTT---------------------SDVDPATELTEMIEAEQAYKANAAVFETG 87

Query: 122 HDMMTTTLDLLRD 134
            DM    + + RD
Sbjct: 88  ADMWEMLMSIKRD 100


>gi|296274021|ref|YP_003656652.1| fagellar hook-basal body protein [Arcobacter nitrofigilis DSM 7299]
 gi|296098195|gb|ADG94145.1| fagellar hook-basal body protein [Arcobacter nitrofigilis DSM 7299]
          Length = 783

 Score = 50.3 bits (118), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 13/74 (17%), Positives = 28/74 (37%)

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           G  + K   +        +       A G ++    N+     ++    R + AN ++I 
Sbjct: 710 GDNLLKKTTESGEPTYNINNDRTSEIAGGNLELSGANLSESLVNLMVFQRAFEANAKSIT 769

Query: 120 QSHDMMTTTLDLLR 133
            +  ++TT + L R
Sbjct: 770 TADALLTTLIQLKR 783



 Score = 36.8 bits (83), Expect = 0.97,   Method: Composition-based stats.
 Identities = 12/49 (24%), Positives = 19/49 (38%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE 52
          +I +     SGL+ Q   +   S NIAN  T G       +  +    +
Sbjct: 1  MIGALWTGISGLSAQQKALDNESHNIANVNTIGYKASRISFADQMYQDK 49


>gi|291617020|ref|YP_003519762.1| FlgE [Pantoea ananatis LMG 20103]
 gi|291152050|gb|ADD76634.1| FlgE [Pantoea ananatis LMG 20103]
          Length = 415

 Score = 50.3 bits (118), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 34/83 (40%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            S  E +   G     +        V   + G   +  +G ++  NV++  E  +M    
Sbjct: 332 FSNPEGLKSQGDNVWAETNASGQAAVGLANTGTFGSLTAGALESSNVDMSKELVNMIVAQ 391

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y AN QTIK    ++ T ++L
Sbjct: 392 RNYQANAQTIKTQDQILNTLVNL 414


>gi|26247216|ref|NP_753256.1| flagellar hook protein FlgE [Escherichia coli CFT073]
 gi|227886566|ref|ZP_04004371.1| flagellar hook protein FlgE [Escherichia coli 83972]
 gi|300974380|ref|ZP_07172592.1| flagellar hook protein FlgE [Escherichia coli MS 45-1]
 gi|26107617|gb|AAN79816.1|AE016759_90 Flagellar hook protein flgE [Escherichia coli CFT073]
 gi|227836770|gb|EEJ47236.1| flagellar hook protein FlgE [Escherichia coli 83972]
 gi|300410623|gb|EFJ94161.1| flagellar hook protein FlgE [Escherichia coli MS 45-1]
 gi|307553078|gb|ADN45853.1| flagellar hook protein FlgE [Escherichia coli ABU 83972]
 gi|315291070|gb|EFU50433.1| flagellar hook protein FlgE [Escherichia coli MS 153-1]
          Length = 401

 Score = 50.3 bits (118), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 26/51 (50%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +     +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 350 NFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 400



 Score = 35.2 bits (79), Expect = 2.9,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 4/63 (6%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          +   A SGL   +  + +I  NIAN+ T G   G+  +               GV+V  I
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFA----DMFAGSKVGLGVKVAGI 57

Query: 67 GVD 69
            D
Sbjct: 58 TQD 60


>gi|331269279|ref|YP_004395771.1| flagellar hook-associated protein 1 [Clostridium botulinum
          BKT015925]
 gi|329125829|gb|AEB75774.1| flagellar hook-associated protein 1 [Clostridium botulinum
          BKT015925]
          Length = 647

 Score = 50.3 bits (118), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 27/78 (34%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  L ++ ++   GL  Q   + + S NIAN+ T G T                M    G
Sbjct: 1  MSGLFSTLNVGKRGLYAQQGALDVTSHNIANSNTEGYTRQRALMETTRPFGMPAMDNQVG 60

Query: 61 VRVKKIGVDQSTFVEEFD 78
                GV+ S      D
Sbjct: 61 PGQIGTGVEISKIQRVRD 78



 Score = 44.1 bits (102), Expect = 0.006,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 20/42 (47%), Gaps = 1/42 (2%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD-LLR 133
             V++  E A++ +    Y AN + I  +  ++   ++ L R
Sbjct: 606 SGVSLNEEMANIVQYQHAYQANAKIIATTDQLLDVVINGLKR 647


>gi|302392940|ref|YP_003828760.1| flagellar basal-body rod protein FlgF [Acetohalobium arabaticum DSM
           5501]
 gi|302205017|gb|ADL13695.1| flagellar basal-body rod protein FlgF [Acetohalobium arabaticum DSM
           5501]
          Length = 245

 Score = 50.3 bits (118), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 20/115 (17%), Positives = 42/115 (36%), Gaps = 7/115 (6%)

Query: 18  QSARMQIISE--NIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVE 75
           Q+  ++++ E  N+ N              R     E     + G+  +   + ++T   
Sbjct: 131 QAGPLEVVGEQVNVDNQNNLVVDGQVVDQVRVVTFAE-----NDGLVKEGDDLYRATPDV 185

Query: 76  EFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
                       G ++  NVNV+    +M E  R Y +N + +K     +  T++
Sbjct: 186 GNQFMATGKINQGYLESSNVNVVESMTNMIEATRHYESNQRVVKAYDQSLDKTVN 240



 Score = 38.7 bits (88), Expect = 0.28,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 18/39 (46%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSD 42
          ++   + A SG+     R  II+ N+AN+ T G      
Sbjct: 1  MLRGLYTAASGMNASLKRTNIITNNLANSTTPGYKKDQT 39


>gi|182680457|ref|YP_001834603.1| flagellar hook protein FlgE [Beijerinckia indica subsp. indica ATCC
           9039]
 gi|182636340|gb|ACB97114.1| flagellar basal body FlaE domain protein [Beijerinckia indica
           subsp. indica ATCC 9039]
          Length = 415

 Score = 50.3 bits (118), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 17/105 (16%), Positives = 41/105 (39%)

Query: 29  IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASG 88
           ++     G T  +      T++  + +    G   +  G   S  + +       +  S 
Sbjct: 311 LSKVYQNGTTVAAYKIPLATVASVDNLMVGTGNVYEANGDSGSIIIGDAGTNGLGSIQSS 370

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NV++  +  DM    R Y AN +  +    ++T  ++L++
Sbjct: 371 QLESSNVDLAAQLTDMIVAQRGYEANSKVFETGSTLLTELVNLVK 415



 Score = 41.8 bits (96), Expect = 0.036,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 31/63 (49%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            L ++   + SG+A QS ++  +S+NIAN+ TTG       +        +  + +GGV
Sbjct: 1  MSLYSALTASVSGMAAQSNKLSAVSDNIANSNTTGYKQADTEFETLVNGLNKTSYDAGGV 60

Query: 62 RVK 64
          +  
Sbjct: 61 KTT 63


>gi|88858142|ref|ZP_01132784.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
           [Pseudoalteromonas tunicata D2]
 gi|88819759|gb|EAR29572.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
           [Pseudoalteromonas tunicata D2]
          Length = 255

 Score = 50.3 bits (118), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 20/44 (45%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  NVN + E   M    R +   ++ +K +  M  +   LLR
Sbjct: 210 LEMSNVNPVDEMVGMIAHQRQFELQVKMMKTAEKMDESQASLLR 253


>gi|304407727|ref|ZP_07389378.1| fagellar hook-basal body protein [Paenibacillus curdlanolyticus
           YK9]
 gi|304343210|gb|EFM09053.1| fagellar hook-basal body protein [Paenibacillus curdlanolyticus
           YK9]
          Length = 288

 Score = 50.3 bits (118), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 15/103 (14%), Positives = 32/103 (31%), Gaps = 3/103 (2%)

Query: 32  ARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVK 91
             T          +   I+    +   G  + + +G   +   E       V    G  +
Sbjct: 187 INTVTGADTGQSLQLTKIADPNALVREGDGKFRLVG--DANLAEAVAAEDGVVVKQGYYE 244

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD-LLR 133
             NV+      D+    R Y AN + ++     +   ++ + R
Sbjct: 245 RSNVDSAQSMVDLMAALRAYEANQKVVQFYDKSLDKAVNEIGR 287



 Score = 37.2 bits (84), Expect = 0.89,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 19/39 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSD 42
          ++   + A +GL  Q  R   ++ NI+N  T G    ++
Sbjct: 1  MLRGLYTAAAGLTTQQRRHDTVTNNISNINTPGYKQTNE 39


>gi|283784085|ref|YP_003363950.1| lateral flagellar hook protein [Citrobacter rodentium ICC168]
 gi|282947539|emb|CBG87091.1| lateral flagellar hook protein [Citrobacter rodentium ICC168]
          Length = 400

 Score = 50.3 bits (118), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 17/83 (20%), Positives = 30/83 (36%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
           T   E  +    G    + G   S  +     G     +SG+++  NV++  E  ++   
Sbjct: 316 TFPNENGLEAVSGTAWVQTGESGSALIGVPGSGSCGTLSSGMLESSNVDITTELVELMTA 375

Query: 108 NRLYMANLQTIKQSHDMMTTTLD 130
            R Y AN + I  S  +      
Sbjct: 376 QRNYQANTKVISTSTQLDDALFQ 398



 Score = 34.1 bits (76), Expect = 6.6,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 23/54 (42%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          S  IA +GL   + ++  IS NIANA T G    +  +       + +     G
Sbjct: 2  SYEIAATGLNAVNEQLDGISNNIANAGTVGYKSMTTDFSAMYADSQAMGVSVAG 55


>gi|200390428|ref|ZP_03217039.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|199602873|gb|EDZ01419.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
          Length = 403

 Score = 50.3 bits (118), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 26/51 (50%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +     +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 352 NFGKLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 402



 Score = 35.6 bits (80), Expect = 2.3,   Method: Composition-based stats.
 Identities = 18/63 (28%), Positives = 25/63 (39%), Gaps = 4/63 (6%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          S   A SGL   +  + +I  NIAN+ T G   G+  +               GV+V  I
Sbjct: 2  SFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFA----DMFAGSKVGLGVKVAGI 57

Query: 67 GVD 69
            D
Sbjct: 58 TQD 60


>gi|12620925|gb|AAG61142.1| flagellar hook-associated protein 1 [Helicobacter pylori]
          Length = 606

 Score = 50.3 bits (118), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 21/119 (17%), Positives = 36/119 (30%), Gaps = 4/119 (3%)

Query: 19  SARMQIISEN--IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEE 76
              +  I+ N  +AN          D Y  K    +  +         KI  D       
Sbjct: 488 RPWLAPINGNFDLANMMQQLQYDSVDFYNDKFDIKQMKISEFYQFLTGKINTDAEKSGRI 547

Query: 77  FDPGHPV--ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            D    +        +    V+V  E  ++ +    Y AN + I     M+ T L + +
Sbjct: 548 LDTKKSMLETIKKEQLSISQVSVDEEMVNLIKFQSGYAANAKVITAIDRMIDTLLGIKQ 606



 Score = 43.7 bits (101), Expect = 0.009,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 40/111 (36%), Gaps = 9/111 (8%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M  +++S + + +GL    + + +   NI+NA         + Y R+ +  +       G
Sbjct: 1   MGGILSSLNASYTGLQAHQSMVDVTGNNISNASD-------EFYSRQRVIAKPQEAYMYG 53

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
            +   +GVD        D            +  N     E + ++E +  +
Sbjct: 54  TKNVNMGVDVEAIERVHDEFVFSRYTKANYE--NTYYDTEFSHLKEASAYF 102


>gi|56695115|ref|YP_165462.1| flagellar hook protein FlgE, putative [Ruegeria pomeroyi DSS-3]
 gi|56676852|gb|AAV93518.1| flagellar hook protein FlgE, putative [Ruegeria pomeroyi DSS-3]
          Length = 431

 Score = 50.3 bits (118), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 21/43 (48%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +    +V  E   M +T R Y ++ + I+   +M+  T ++ R
Sbjct: 389 EESTTDVATELTAMIQTQRAYSSSAKVIQTVDEMLQETTNIKR 431



 Score = 37.9 bits (86), Expect = 0.41,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 29/64 (45%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            + +S +   + L+  ++R+  IS+NIAN+ T G       +     +     + +GGV
Sbjct: 1  MTISSSLNAGVAALSANASRLATISDNIANSSTYGYKRVETDFHALVNASGRGKYTAGGV 60

Query: 62 RVKK 65
          R   
Sbjct: 61 RTTT 64


>gi|297517866|ref|ZP_06936252.1| flagellar hook protein FlgE [Escherichia coli OP50]
          Length = 401

 Score = 50.3 bits (118), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 26/51 (50%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +     +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 350 NFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 400



 Score = 35.2 bits (79), Expect = 3.0,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 4/63 (6%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          +   A SGL   +  + +I  NIAN+ T G   G+  +               GV+V  I
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFA----DMFAGSKVGLGVKVAGI 57

Query: 67 GVD 69
            D
Sbjct: 58 TQD 60


>gi|283780137|ref|YP_003370892.1| flagellar basal-body rod protein FlgG [Pirellula staleyi DSM 6068]
 gi|283438590|gb|ADB17032.1| flagellar basal-body rod protein FlgG [Pirellula staleyi DSM 6068]
          Length = 266

 Score = 50.3 bits (118), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 22/48 (45%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             G+++  NV  + E  D+  T R +  N Q I+    ++    +L R
Sbjct: 219 RQGMLEASNVEPVQELIDLITTQRSFELNSQAIQAGDQILQLISNLRR 266



 Score = 36.8 bits (83), Expect = 1.0,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 30/72 (41%), Gaps = 5/72 (6%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSD-----PYRRKTISFEEVMHGSG 59
          + + + A +G+     ++ +I+ N+AN  TTG   G        YR++ +   +    + 
Sbjct: 3  VQTLYTAATGMESLQTKLDVIANNLANVNTTGFKRGRANFEDLFYRQEKLPGSQDQQQNL 62

Query: 60 GVRVKKIGVDQS 71
                IG+   
Sbjct: 63 TATGTAIGLGSR 74


>gi|149911700|ref|ZP_01900308.1| Flagellar basal body rod protein FlgG [Moritella sp. PE36]
 gi|149805230|gb|EDM65247.1| Flagellar basal body rod protein FlgG [Moritella sp. PE36]
          Length = 262

 Score = 50.3 bits (118), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 14/78 (17%), Positives = 26/78 (33%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +   G     + G                    G ++  NVNV  E  ++ E+ 
Sbjct: 179 FVNPGGLQPIGQNMYIQTGASGDPVQGLPSNEGLGKLVQGAIETSNVNVTEELVNLIESQ 238

Query: 109 RLYMANLQTIKQSHDMMT 126
           R+Y  N + I    +M++
Sbjct: 239 RVYEMNSKVISAVDEMLS 256



 Score = 41.0 bits (94), Expect = 0.057,   Method: Composition-based stats.
 Identities = 19/108 (17%), Positives = 36/108 (33%), Gaps = 6/108 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +  +  I+ +GL  Q A +  IS N+ANA T G       +        + ++  GG   
Sbjct: 1   MNPALWISKTGLEAQQANISTISNNLANASTVGFKKERAIF---EDLLYQAINQPGGQSS 57

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
           +   +     V                   N+     + D+  + R +
Sbjct: 58  QNTKLPSGLMVGSGARVVATQKDHS---QGNMLTTDNSLDLMVSGRGF 102


>gi|283784086|ref|YP_003363951.1| lateral flagellar rod protein [Citrobacter rodentium ICC168]
 gi|282947540|emb|CBG87093.1| lateral flagellar rod protein [Citrobacter rodentium ICC168]
          Length = 261

 Score = 50.3 bits (118), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 10/78 (12%), Positives = 22/78 (28%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +    +   G     +                        ++  NV+++ E   M    
Sbjct: 178 FANPAGLSAEGDNLYLETAASGQPTEGIPGEDGLGTLQGNALEGSNVDIVNEMVAMITVQ 237

Query: 109 RLYMANLQTIKQSHDMMT 126
           R Y  N + +  + DM+ 
Sbjct: 238 RAYEMNAKMVSAADDMLQ 255



 Score = 39.1 bits (89), Expect = 0.21,   Method: Composition-based stats.
 Identities = 15/42 (35%), Positives = 23/42 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          + A+  I+ +GL+ Q A M  I+ NIAN  TTG       ++
Sbjct: 1  MNAALWISKTGLSAQDAEMSAIANNIANVNTTGFKRDRVMFQ 42


>gi|313672411|ref|YP_004050522.1| flagellar basal-body rod protein flgf [Calditerrivibrio
           nitroreducens DSM 19672]
 gi|312939167|gb|ADR18359.1| flagellar basal-body rod protein FlgF [Calditerrivibrio
           nitroreducens DSM 19672]
          Length = 251

 Score = 50.3 bits (118), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 20/52 (38%), Gaps = 1/52 (1%)

Query: 83  VANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT-LDLLR 133
                G ++  NVN + E   M E NR +    + I+    +      +L R
Sbjct: 198 PNIMQGYIEGSNVNAVEEMVKMIEANRGFETYQKVIQTIDQLNEKASNELGR 249



 Score = 36.4 bits (82), Expect = 1.2,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 21/42 (50%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++   ++A SG+ +Q   +  I+ N+AN  T G       ++
Sbjct: 1  MLNGLYVAASGMMMQERVVSNIANNLANVNTNGYKKDGFTFQ 42


>gi|304397204|ref|ZP_07379083.1| fagellar hook-basal body protein [Pantoea sp. aB]
 gi|304355353|gb|EFM19721.1| fagellar hook-basal body protein [Pantoea sp. aB]
          Length = 418

 Score = 50.3 bits (118), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 14/42 (33%), Positives = 23/42 (54%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           ++  NV++  E  +M    R Y AN QTIK    ++ T ++L
Sbjct: 376 LESSNVDMSKELVNMIVAQRNYQANAQTIKTQDQILNTLVNL 417


>gi|285018209|ref|YP_003375920.1| flagellar hook protein flge [Xanthomonas albilineans GPE PC73]
 gi|283473427|emb|CBA15932.1| probable flagellar hook protein flge [Xanthomonas albilineans]
          Length = 407

 Score = 50.3 bits (118), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 10/61 (16%), Positives = 23/61 (37%)

Query: 71  STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           +            +  SG ++   V++  +  +M    R + AN Q I     +  T ++
Sbjct: 346 APRTGVAGSSDFGSVQSGALESSTVDLTEQLVNMIVAQRNFQANSQMISTQDQVTQTVIN 405

Query: 131 L 131
           +
Sbjct: 406 I 406



 Score = 34.5 bits (77), Expect = 5.3,   Method: Composition-based stats.
 Identities = 9/60 (15%), Positives = 22/60 (36%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
            + + SG+   +  + + + NIAN  TTG       +  +       +  +      ++
Sbjct: 2  GFNTSLSGIKAANTDLNVTANNIANVNTTGFKSSRAEFADQFTVSGYGLARNAVGSGVRV 61


>gi|94500241|ref|ZP_01306774.1| Flagellar hook protein FlgE [Oceanobacter sp. RED65]
 gi|94427540|gb|EAT12517.1| Flagellar hook protein FlgE [Oceanobacter sp. RED65]
          Length = 1240

 Score = 50.3 bits (118), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 25/64 (39%)

Query: 68   VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
               +  V     G      S  ++  NV++  E   +    R + A+ +TI+ S  +  T
Sbjct: 1177 ESGTPTVGSPRTGTFGNLRSSALEDSNVDLSEELVGLIIAQRNFQASAKTIETSDTVTQT 1236

Query: 128  TLDL 131
             + L
Sbjct: 1237 IIQL 1240



 Score = 35.2 bits (79), Expect = 3.0,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 18/39 (46%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          + +I  SG+   S  +++   N+ANA T G       + 
Sbjct: 2  AFNIGLSGIRAASTDLEVTGNNVANASTVGFKESRAEFA 40


>gi|28897552|ref|NP_797157.1| flagellar hook protein FlgE [Vibrio parahaemolyticus RIMD 2210633]
 gi|153839685|ref|ZP_01992352.1| FlgE [Vibrio parahaemolyticus AQ3810]
 gi|260364611|ref|ZP_05777213.1| flagellar hook protein FlgE [Vibrio parahaemolyticus K5030]
 gi|260878284|ref|ZP_05890639.1| flagellar hook protein FlgE [Vibrio parahaemolyticus AN-5034]
 gi|260898114|ref|ZP_05906610.1| flagellar hook protein FlgE [Vibrio parahaemolyticus Peru-466]
 gi|5361008|gb|AAD42915.1|U12817_9 polar flagellar FlgE homolog [Vibrio parahaemolyticus]
 gi|28805764|dbj|BAC59041.1| polar flagellar FlgE [Vibrio parahaemolyticus RIMD 2210633]
 gi|149746795|gb|EDM57783.1| FlgE [Vibrio parahaemolyticus AQ3810]
 gi|308086119|gb|EFO35814.1| flagellar hook protein FlgE [Vibrio parahaemolyticus Peru-466]
 gi|308090147|gb|EFO39842.1| flagellar hook protein FlgE [Vibrio parahaemolyticus AN-5034]
 gi|308115102|gb|EFO52642.1| flagellar hook protein FlgE [Vibrio parahaemolyticus K5030]
 gi|328473453|gb|EGF44301.1| flagellar hook protein FlgE [Vibrio parahaemolyticus 10329]
          Length = 437

 Score = 50.3 bits (118), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 13/84 (15%), Positives = 34/84 (40%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
            +  E+ +   GG +             E + G      +G+++  N+++  E  D+   
Sbjct: 353 RVPNEQGLDKKGGTQWDSTQFSGDKIWGESNKGSFGTINNGMLEQSNIDMTQELVDLISA 412

Query: 108 NRLYMANLQTIKQSHDMMTTTLDL 131
            R + AN ++++  + +    L +
Sbjct: 413 QRNFQANSRSLEVHNQLQQNILQI 436



 Score = 38.3 bits (87), Expect = 0.33,   Method: Composition-based stats.
 Identities = 11/36 (30%), Positives = 16/36 (44%)

Query: 10 IANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ SGL+     +   S NIANA T G       + 
Sbjct: 4  VSLSGLSAAQLDLNTTSNNIANANTYGFKESRAEFA 39


>gi|253681880|ref|ZP_04862677.1| flagellar basal body rod protein FlgG [Clostridium botulinum D str.
           1873]
 gi|253561592|gb|EES91044.1| flagellar basal body rod protein FlgG [Clostridium botulinum D str.
           1873]
          Length = 263

 Score = 50.3 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 43/106 (40%), Gaps = 1/106 (0%)

Query: 25  ISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVA 84
           I  N + AR   +  G      K     +V++      ++KI  D           + V 
Sbjct: 154 ILVNNSPARMACNDMGEIYLNGKPAFKIQVVNFENYKSLRKI-QDNLYSGTNPKETNDVI 212

Query: 85  NASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
                ++  NVNV+ E +DM  T R + +N + ++   + +  T++
Sbjct: 213 VKQNYLEKSNVNVMAEVSDMMMTMRNFESNQKVVQALDETLGKTVN 258


>gi|304392493|ref|ZP_07374433.1| flagellar hook protein FlgE [Ahrensia sp. R2A130]
 gi|303295123|gb|EFL89483.1| flagellar hook protein FlgE [Ahrensia sp. R2A130]
          Length = 423

 Score = 50.3 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 21/44 (47%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  NV +  E  DM    R Y AN +  +   D+M   ++L R
Sbjct: 380 LEQSNVELADELTDMIRAQRGYTANSKVFQTGADLMDVIVNLRR 423



 Score = 42.2 bits (97), Expect = 0.023,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 22/45 (48%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR 46
            L      + SG+  QS R+  +++N+AN  TTG    S  + +
Sbjct: 1  MSLYGMMRTSVSGMQAQSNRLSTVADNVANVDTTGYKKYSTEFAQ 45


>gi|193069470|ref|ZP_03050424.1| flagellar hook protein FlgE [Escherichia coli E110019]
 gi|192957218|gb|EDV87667.1| flagellar hook protein FlgE [Escherichia coli E110019]
 gi|323174795|gb|EFZ60410.1| flagellar hook protein flgE [Escherichia coli LT-68]
          Length = 401

 Score = 50.3 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 26/51 (50%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +     +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 350 NFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 400



 Score = 34.8 bits (78), Expect = 3.4,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 4/63 (6%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          +   A SGL   +  + +I  NIAN+ T G   G+  +               GV+V  I
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYGFKTGTASFA----DMFAGSKVGLGVKVAGI 57

Query: 67 GVD 69
            D
Sbjct: 58 TQD 60


>gi|238785497|ref|ZP_04629480.1| Flagellar hook protein FlgE [Yersinia bercovieri ATCC 43970]
 gi|238713599|gb|EEQ05628.1| Flagellar hook protein FlgE [Yersinia bercovieri ATCC 43970]
          Length = 419

 Score = 50.3 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 34/83 (40%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +  E +   G    K+     +  +     G      SG ++  NV++  E  +M    
Sbjct: 336 FANPEGLSSEGDNVWKETLASGNPMLGTAGGGGFGTLTSGALESSNVDLSKELVNMIVAQ 395

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y +N QTIK    ++ T ++L
Sbjct: 396 RNYQSNAQTIKTQDQILQTLVNL 418



 Score = 34.8 bits (78), Expect = 4.1,   Method: Composition-based stats.
 Identities = 19/63 (30%), Positives = 26/63 (41%), Gaps = 4/63 (6%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
              A SGL   S+ + +I  NIAN+ T+G   GS  +               GV+V  I
Sbjct: 2  GFSQAVSGLNAASSNLDVIGNNIANSATSGFKAGSVSFA----DMFAGSQTGMGVKVAGI 57

Query: 67 GVD 69
            D
Sbjct: 58 TQD 60


>gi|109899401|ref|YP_662656.1| flagellar basal-body rod protein FlgF [Pseudoalteromonas atlantica
           T6c]
 gi|109701682|gb|ABG41602.1| flagellar basal-body rod protein FlgF [Pseudoalteromonas atlantica
           T6c]
          Length = 247

 Score = 50.3 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 26/48 (54%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            +G+++  NVN + E  DM    R Y   ++ +K++ D+ +    LLR
Sbjct: 198 RNGMLEGSNVNPVEEMVDMISLQRHYEMQIKFMKEASDLDSRANQLLR 245


>gi|74311638|ref|YP_310057.1| flagellar hook protein FlgE [Shigella sonnei Ss046]
 gi|157157539|ref|YP_001462310.1| flagellar hook protein FlgE [Escherichia coli E24377A]
 gi|191168462|ref|ZP_03030250.1| flagellar hook protein FlgE [Escherichia coli B7A]
 gi|193064513|ref|ZP_03045593.1| flagellar hook protein FlgE [Escherichia coli E22]
 gi|194438060|ref|ZP_03070153.1| flagellar hook protein FlgE [Escherichia coli 101-1]
 gi|209918330|ref|YP_002292414.1| flagellar hook protein FlgE [Escherichia coli SE11]
 gi|218694610|ref|YP_002402277.1| flagellar hook protein FlgE [Escherichia coli 55989]
 gi|253773900|ref|YP_003036731.1| flagellar hook protein FlgE [Escherichia coli 'BL21-Gold(DE3)pLysS
           AG']
 gi|254161182|ref|YP_003044290.1| flagellar hook protein FlgE [Escherichia coli B str. REL606]
 gi|256018667|ref|ZP_05432532.1| flagellar hook protein FlgE [Shigella sp. D9]
 gi|260843316|ref|YP_003221094.1| flagellar hook protein FlgE [Escherichia coli O103:H2 str. 12009]
 gi|260854559|ref|YP_003228450.1| flagellar hook protein FlgE [Escherichia coli O26:H11 str. 11368]
 gi|260867439|ref|YP_003233841.1| flagellar hook protein FlgE [Escherichia coli O111:H- str. 11128]
 gi|293433366|ref|ZP_06661794.1| flagellar hook protein FlgE [Escherichia coli B088]
 gi|300816778|ref|ZP_07096998.1| flagellar hook protein FlgE [Escherichia coli MS 107-1]
 gi|300821143|ref|ZP_07101292.1| flagellar hook protein FlgE [Escherichia coli MS 119-7]
 gi|300902467|ref|ZP_07120449.1| flagellar hook protein FlgE [Escherichia coli MS 84-1]
 gi|300922602|ref|ZP_07138702.1| flagellar hook protein FlgE [Escherichia coli MS 182-1]
 gi|300928372|ref|ZP_07143906.1| flagellar hook protein FlgE [Escherichia coli MS 187-1]
 gi|301304985|ref|ZP_07211087.1| flagellar hook protein FlgE [Escherichia coli MS 124-1]
 gi|301328554|ref|ZP_07221615.1| flagellar hook protein FlgE [Escherichia coli MS 78-1]
 gi|309798070|ref|ZP_07692445.1| flagellar hook protein FlgE [Escherichia coli MS 145-7]
 gi|331667476|ref|ZP_08368340.1| flagellar hook protein FlgE [Escherichia coli TA271]
 gi|331676867|ref|ZP_08377563.1| flagellar hook protein FlgE [Escherichia coli H591]
 gi|332279736|ref|ZP_08392149.1| flagellar hook protein FlgE [Shigella sp. D9]
 gi|73855115|gb|AAZ87822.1| flagellar hook protein [Shigella sonnei Ss046]
 gi|157079569|gb|ABV19277.1| flagellar hook protein FlgE [Escherichia coli E24377A]
 gi|190901481|gb|EDV61242.1| flagellar hook protein FlgE [Escherichia coli B7A]
 gi|192927765|gb|EDV82379.1| flagellar hook protein FlgE [Escherichia coli E22]
 gi|194422996|gb|EDX38990.1| flagellar hook protein FlgE [Escherichia coli 101-1]
 gi|209911589|dbj|BAG76663.1| flagellar hook protein FlgE [Escherichia coli SE11]
 gi|218351342|emb|CAU97048.1| flagellar hook protein [Escherichia coli 55989]
 gi|253324944|gb|ACT29546.1| flagellar basal body FlaE domain protein [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253973083|gb|ACT38754.1| flagellar hook protein E [Escherichia coli B str. REL606]
 gi|253977297|gb|ACT42967.1| flagellar hook protein E [Escherichia coli BL21(DE3)]
 gi|257753208|dbj|BAI24710.1| flagellar hook protein FlgE [Escherichia coli O26:H11 str. 11368]
 gi|257758463|dbj|BAI29960.1| flagellar hook protein FlgE [Escherichia coli O103:H2 str. 12009]
 gi|257763795|dbj|BAI35290.1| flagellar hook protein FlgE [Escherichia coli O111:H- str. 11128]
 gi|291324185|gb|EFE63607.1| flagellar hook protein FlgE [Escherichia coli B088]
 gi|300405499|gb|EFJ89037.1| flagellar hook protein FlgE [Escherichia coli MS 84-1]
 gi|300421079|gb|EFK04390.1| flagellar hook protein FlgE [Escherichia coli MS 182-1]
 gi|300463630|gb|EFK27123.1| flagellar hook protein FlgE [Escherichia coli MS 187-1]
 gi|300526442|gb|EFK47511.1| flagellar hook protein FlgE [Escherichia coli MS 119-7]
 gi|300530552|gb|EFK51614.1| flagellar hook protein FlgE [Escherichia coli MS 107-1]
 gi|300839703|gb|EFK67463.1| flagellar hook protein FlgE [Escherichia coli MS 124-1]
 gi|300844946|gb|EFK72706.1| flagellar hook protein FlgE [Escherichia coli MS 78-1]
 gi|308118353|gb|EFO55615.1| flagellar hook protein FlgE [Escherichia coli MS 145-7]
 gi|313848602|emb|CAQ31597.2| flagellar hook protein FlgE, subunit of Flagellum [Escherichia coli
           BL21(DE3)]
 gi|315253877|gb|EFU33845.1| flagellar hook protein FlgE [Escherichia coli MS 85-1]
 gi|323156883|gb|EFZ43017.1| flagellar hook protein flgE [Escherichia coli EPECa14]
 gi|323163758|gb|EFZ49577.1| flagellar hook protein flgE [Escherichia coli E128010]
 gi|323165584|gb|EFZ51371.1| flagellar hook protein flgE [Shigella sonnei 53G]
 gi|323175693|gb|EFZ61287.1| flagellar hook protein flgE [Escherichia coli 1180]
 gi|323185801|gb|EFZ71162.1| flagellar hook protein flgE [Escherichia coli 1357]
 gi|323947622|gb|EGB43626.1| fagellar hook-basal body protein [Escherichia coli H120]
 gi|323962675|gb|EGB58253.1| fagellar hook-basal body protein [Escherichia coli H489]
 gi|323973335|gb|EGB68524.1| fagellar hook-basal body protein [Escherichia coli TA007]
 gi|324017420|gb|EGB86639.1| flagellar hook protein FlgE [Escherichia coli MS 117-3]
 gi|324117353|gb|EGC11260.1| fagellar hook-basal body protein [Escherichia coli E1167]
 gi|331065061|gb|EGI36956.1| flagellar hook protein FlgE [Escherichia coli TA271]
 gi|331075556|gb|EGI46854.1| flagellar hook protein FlgE [Escherichia coli H591]
 gi|332102088|gb|EGJ05434.1| flagellar hook protein FlgE [Shigella sp. D9]
          Length = 401

 Score = 50.3 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 26/51 (50%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +     +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 350 NFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 400



 Score = 35.2 bits (79), Expect = 3.1,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 4/63 (6%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          +   A SGL   +  + +I  NIAN+ T G   G+  +               GV+V  I
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFA----DMFAGSKVGLGVKVAGI 57

Query: 67 GVD 69
            D
Sbjct: 58 TQD 60


>gi|300918678|ref|ZP_07135259.1| flagellar hook protein FlgE [Escherichia coli MS 115-1]
 gi|300414172|gb|EFJ97482.1| flagellar hook protein FlgE [Escherichia coli MS 115-1]
          Length = 401

 Score = 50.3 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 26/51 (50%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +     +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 350 NFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 400



 Score = 35.2 bits (79), Expect = 3.1,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 4/63 (6%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          +   A SGL   +  + +I  NIAN+ T G   G+  +               GV+V  I
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFA----DMFAGSKVGLGVKVAGI 57

Query: 67 GVD 69
            D
Sbjct: 58 TQD 60


>gi|302382558|ref|YP_003818381.1| fagellar hook-basal body protein [Brevundimonas subvibrioides ATCC
           15264]
 gi|302193186|gb|ADL00758.1| fagellar hook-basal body protein [Brevundimonas subvibrioides ATCC
           15264]
          Length = 478

 Score = 50.3 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 9/44 (20%), Positives = 21/44 (47%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++   V++  E   +  T R Y A+ + I  + +M+   + + R
Sbjct: 435 LEASTVDLSAEFTGLITTQRAYSASSKIITTADEMLAELISIKR 478



 Score = 34.5 bits (77), Expect = 4.5,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 24/59 (40%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
            + ++     SGL   SA +  IS+NIAN  T G    +  +     S  +    S G
Sbjct: 1  MSINSALLAGVSGLTANSAALAAISQNIANVNTVGYKRTAAEFSTVVNSQSQGAGYSAG 59


>gi|254780525|ref|YP_003064938.1| flagellar hook protein FlgE [Candidatus Liberibacter asiaticus str.
           psy62]
 gi|254040202|gb|ACT56998.1| flagellar hook protein FlgE [Candidatus Liberibacter asiaticus str.
           psy62]
          Length = 421

 Score = 50.3 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 19/92 (20%), Positives = 32/92 (34%), Gaps = 2/92 (2%)

Query: 44  YRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANA--SGIVKYPNVNVLVET 101
           YR    +     +         +    S  +    PGH       SG ++  NV++  E 
Sbjct: 330 YRLAIATVPSEDNLKLFDGNTYLPTRDSGDISIGFPGHNQHGEIFSGALETANVDIASEL 389

Query: 102 ADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++ E  R Y  N +  +   D M   + L R
Sbjct: 390 TELIEAQRNYAVNSKVFQTGSDFMDILISLKR 421



 Score = 46.8 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/82 (20%), Positives = 30/82 (36%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            ++ S   A SG+  QS R+  +S+NIAN  T G    +  +           + SGG+
Sbjct: 1  MGILGSMKTAMSGMDAQSNRVSAVSDNIANVDTVGYKRTAIAFSSLVFPSTSNSYVSGGL 60

Query: 62 RVKKIGVDQSTFVEEFDPGHPV 83
           +    +            +  
Sbjct: 61 EISTKDMISEQGSLMHTASNTD 82


>gi|331657138|ref|ZP_08358100.1| flagellar hook protein FlgE [Escherichia coli TA206]
 gi|331055386|gb|EGI27395.1| flagellar hook protein FlgE [Escherichia coli TA206]
          Length = 401

 Score = 50.3 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 26/51 (50%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +     +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 350 NFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 400



 Score = 35.2 bits (79), Expect = 3.1,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 4/63 (6%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          +   A SGL   +  + +I  NIAN+ T G   G+  +               GV+V  I
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFA----DMFAGSKVGLGVKVAGI 57

Query: 67 GVD 69
            D
Sbjct: 58 TQD 60


>gi|84388091|ref|ZP_00990987.1| flagellar hook protein [Vibrio splendidus 12B01]
 gi|84377158|gb|EAP94028.1| flagellar hook protein [Vibrio splendidus 12B01]
          Length = 434

 Score = 50.3 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/84 (16%), Positives = 35/84 (41%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
            +  E+ +   GG +        S    E + G   +  +G ++  N+++  E  D+   
Sbjct: 350 RVPNEQGLDKKGGTQWDSTNDSGSKIWGESNKGSFGSINNGSLEQSNIDMTQELVDLISA 409

Query: 108 NRLYMANLQTIKQSHDMMTTTLDL 131
            R + AN ++++  + +    L +
Sbjct: 410 QRNFQANSRSLEVHNQLQQNILQI 433



 Score = 41.4 bits (95), Expect = 0.038,   Method: Composition-based stats.
 Identities = 17/97 (17%), Positives = 34/97 (35%), Gaps = 5/97 (5%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPY---RRKTISFEEVMHGSGGVRVKKI 66
           +A SGL+     +   S NIANA T G       +      ++         GG +  ++
Sbjct: 4   VALSGLSAAQLDLNTTSNNIANANTFGFKESRAEFGDVYSSSLFTNAKTTAGGGAQASQV 63

Query: 67  GV--DQSTFVEEFDPGHPVANASGIVKYPNVNVLVET 101
                + + +   +P     + +G        ++ E 
Sbjct: 64  AQQFHEGSSIYTNNPMDLRVSGTGFFAVSKDRMVPEI 100


>gi|254230140|ref|ZP_04923535.1| FlgE [Vibrio sp. Ex25]
 gi|262394939|ref|YP_003286793.1| flagellar hook protein FlgE [Vibrio sp. Ex25]
 gi|151937333|gb|EDN56196.1| FlgE [Vibrio sp. Ex25]
 gi|262338533|gb|ACY52328.1| flagellar hook protein FlgE [Vibrio sp. Ex25]
          Length = 437

 Score = 50.3 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/84 (15%), Positives = 34/84 (40%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
            +  E+ +   GG +             E + G      +G+++  N+++  E  D+   
Sbjct: 353 RVPNEQGLDKKGGTQWDSTQFSGDKIWGESNKGSFGTINNGMLEQSNIDMTQELVDLISA 412

Query: 108 NRLYMANLQTIKQSHDMMTTTLDL 131
            R + AN ++++  + +    L +
Sbjct: 413 QRNFQANSRSLEVHNQLQQNILQI 436



 Score = 38.3 bits (87), Expect = 0.33,   Method: Composition-based stats.
 Identities = 11/36 (30%), Positives = 16/36 (44%)

Query: 10 IANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ SGL+     +   S NIANA T G       + 
Sbjct: 4  VSLSGLSAAQLDLNTTSNNIANANTYGFKESRAEFA 39


>gi|301023263|ref|ZP_07187060.1| flagellar hook protein FlgE [Escherichia coli MS 69-1]
 gi|300397108|gb|EFJ80646.1| flagellar hook protein FlgE [Escherichia coli MS 69-1]
          Length = 401

 Score = 50.3 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 26/51 (50%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +     +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 350 NFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 400



 Score = 35.2 bits (79), Expect = 3.2,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 4/63 (6%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          +   A SGL   +  + +I  NIAN+ T G   G+  +               GV+V  I
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFA----DMFAGSKVGLGVKVAGI 57

Query: 67 GVD 69
            D
Sbjct: 58 TQD 60


>gi|78221651|ref|YP_383398.1| hypothetical protein Gmet_0430 [Geobacter metallireducens GS-15]
 gi|78192906|gb|ABB30673.1| conserved hypothetical protein [Geobacter metallireducens GS-15]
          Length = 242

 Score = 50.3 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 25/65 (38%), Gaps = 1/65 (1%)

Query: 70  QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
            +      +P        G ++  NVN + E   + ETNR +    + +K   D+     
Sbjct: 177 PADPQATPNPVTGEKVMQGAIEESNVNTVQEMVQLIETNRYFEMCSKVVKAYDDLTGKAA 236

Query: 130 D-LLR 133
           + + +
Sbjct: 237 NEIGK 241



 Score = 37.2 bits (84), Expect = 0.85,   Method: Composition-based stats.
 Identities = 15/86 (17%), Positives = 30/86 (34%), Gaps = 2/86 (2%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          + +  + A +G      R+ ++S N+AN  T G       +     +        GG   
Sbjct: 1  MNSGIYSALTGNVAAMKRLDVLSNNLANVNTPGFKKDRMTFESMLQTVGAQPRPGGGTDA 60

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGI 89
                ++TF  ++ PG      +  
Sbjct: 61 P--VFAETTFFTDYSPGSVKQTGNPF 84


>gi|319765009|ref|YP_004128946.1| flagellar basal body rod protein [Alicycliphilus denitrificans BC]
 gi|330827204|ref|YP_004390507.1| flagellar basal body rod protein [Alicycliphilus denitrificans
           K601]
 gi|317119570|gb|ADV02059.1| flagellar basal body rod protein [Alicycliphilus denitrificans BC]
 gi|329312576|gb|AEB86991.1| flagellar basal body rod protein [Alicycliphilus denitrificans
           K601]
          Length = 107

 Score = 50.3 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/130 (18%), Positives = 42/130 (32%), Gaps = 30/130 (23%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M  +   A IA SGL     R+   + N+AN           P   +    ++     GG
Sbjct: 5   MGTMTPLASIARSGLQAAQLRLDSSAHNVANL--------GTPGFARQAVDQQAAPAQGG 56

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V+ +     Q                      P V +  E  +       + A+L  ++ 
Sbjct: 57  VQARTGRFGQ----------------------PGVALEAEAVEQMAATYAFKASLLVLRT 94

Query: 121 SHDMMTTTLD 130
           + +M  + LD
Sbjct: 95  ADEMAGSLLD 104


>gi|171321838|ref|ZP_02910739.1| flagellar basal body FlaE domain protein [Burkholderia ambifaria
           MEX-5]
 gi|171092876|gb|EDT38128.1| flagellar basal body FlaE domain protein [Burkholderia ambifaria
           MEX-5]
          Length = 413

 Score = 50.3 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/83 (16%), Positives = 30/83 (36%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +    +   GG +  +        +      +        ++  NV++  +  ++    
Sbjct: 331 FNNPNGLVNLGGNQYAETAASGVPQISAPGSTNHGTLQGSALENSNVDLTSQLVNLITAQ 390

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y AN QTIK    +  T ++L
Sbjct: 391 RNYQANAQTIKTQQTVDQTLINL 413


>gi|317178579|dbj|BAJ56367.1| flagellar hook-associated protein FlgK [Helicobacter pylori F30]
          Length = 606

 Score = 50.3 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/119 (17%), Positives = 35/119 (29%), Gaps = 4/119 (3%)

Query: 19  SARMQIISEN--IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEE 76
              +  I+ N  +AN          D Y  K       +         KI  D       
Sbjct: 488 RPWLAPINGNFDVANMMQQLQYDSVDFYNDKFDVKPMKISEFYQFLTGKINTDAEKSGRI 547

Query: 77  FDPGHPV--ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            D    +        +    V+V  E  ++ +    Y AN + I     M+ T L + +
Sbjct: 548 LDTKKSMLETIKKEQLSISQVSVDEEMVNLIKFQSGYAANAKVITAIDRMIDTLLGIKQ 606



 Score = 44.1 bits (102), Expect = 0.006,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 41/111 (36%), Gaps = 9/111 (8%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M  +++S + + +GL    + + +   NI+NA         + Y R+ +  +       G
Sbjct: 1   MGGILSSLNASYTGLQAHQSMVDVTGNNISNASD-------EFYSRQRVIAKPQEAYMYG 53

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
            +   +GVD +      D            +  N     E + ++E +  +
Sbjct: 54  TKNVNMGVDVTAIERVHDEFVFSRYTKANYE--NTYYDTEFSHLKEASAYF 102


>gi|326796597|ref|YP_004314417.1| flagellar hook-basal body protein [Marinomonas mediterranea MMB-1]
 gi|326547361|gb|ADZ92581.1| flagellar hook-basal body protein [Marinomonas mediterranea MMB-1]
          Length = 565

 Score = 49.9 bits (117), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/84 (19%), Positives = 36/84 (42%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
           T    + ++ SG           +  + + + G   +   G ++  NV++  E   + E 
Sbjct: 481 TFDNTDGLNPSGDTGWVASSSSGAANIGKANTGTLGSIKGGSLEESNVDLTSELVALIEA 540

Query: 108 NRLYMANLQTIKQSHDMMTTTLDL 131
            R Y AN +T++  + +  T ++L
Sbjct: 541 QRNYQANSKTLETENTVTQTIINL 564



 Score = 33.7 bits (75), Expect = 8.1,   Method: Composition-based stats.
 Identities = 14/94 (14%), Positives = 28/94 (29%)

Query: 7   SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
             + A SG+   +  + +   NIANA TTG       +     +       S  +     
Sbjct: 2   GFNTALSGIKASADYLGVTGNNIANADTTGFKKSRIEFGDLYNTNVIGSGSSNTIGSGVS 61

Query: 67  GVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVE 100
             + +      +      N    +      V+ +
Sbjct: 62  VNNVAQDFSAGNYNDTGNNLDVAIDGSGFFVVDQ 95


>gi|326202441|ref|ZP_08192310.1| fagellar hook-basal body protein [Clostridium papyrosolvens DSM
           2782]
 gi|325987559|gb|EGD48386.1| fagellar hook-basal body protein [Clostridium papyrosolvens DSM
           2782]
          Length = 265

 Score = 49.9 bits (117), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 20/44 (45%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            G  +  NVN++ E  DM    R Y AN + ++     +   ++
Sbjct: 216 QGYDELSNVNIIDEMVDMITVMRAYEANQKVLQAQDGTLDKAVN 259



 Score = 36.8 bits (83), Expect = 1.2,   Method: Composition-based stats.
 Identities = 9/70 (12%), Positives = 23/70 (32%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I   + +   +     ++ +I+ N+AN  TT     +  Y+         ++ +     
Sbjct: 1  MIRGLYTSAWSMLANQKKLDVITNNMANVNTTAYKKDTVVYQSFPEILTRRINDTQSPTN 60

Query: 64 KKIGVDQSTF 73
              V     
Sbjct: 61 PSAVVGSMEL 70


>gi|119775450|ref|YP_928190.1| flagellar hook protein FlgE [Shewanella amazonensis SB2B]
 gi|119767950|gb|ABM00521.1| flagellar hook protein FlgE [Shewanella amazonensis SB2B]
          Length = 453

 Score = 49.9 bits (117), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/103 (20%), Positives = 41/103 (39%)

Query: 29  IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASG 88
           I  A + G T           + E+ +   G    K+     +    E + G   A  S 
Sbjct: 350 IKAAYSNGSTVPLGRVALVRFANEQGLTQVGNTSWKESLASGTALAGEANSGTFGAIRSA 409

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            ++  NV++  E  D+    R + AN +T++ ++ +  T L +
Sbjct: 410 ALEQSNVDLTTELVDLISAQRNFQANSRTLEVNNTLQQTILQI 452



 Score = 40.2 bits (92), Expect = 0.10,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 25/65 (38%), Gaps = 3/65 (4%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY---RRKTISFEEVMHGSGGVRV 63
          S +IA SG+A     +   + NIAN  TTG       +      +I         GGV  
Sbjct: 2  SFNIALSGIAAAQKDLNTTANNIANVNTTGFKESRAEFADVYAASIFSNSKTQVGGGVTT 61

Query: 64 KKIGV 68
           ++  
Sbjct: 62 TQVAQ 66


>gi|281306984|pdb|3A69|A Chain A, Atomic Model Of The Bacterial Flagellar Hook Based On
           Docking An X-Ray Derived Structure And Terminal Two
           Alpha- Helices Into An 7.1 Angstrom Resolution Cryoem
           Map
          Length = 402

 Score = 49.9 bits (117), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 26/51 (50%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +     +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 351 NFGKLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401



 Score = 35.6 bits (80), Expect = 2.5,   Method: Composition-based stats.
 Identities = 18/63 (28%), Positives = 25/63 (39%), Gaps = 4/63 (6%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          S   A SGL   +  + +I  NIAN+ T G   G+  +               GV+V  I
Sbjct: 1  SFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFA----DMFAGSKVGLGVKVAGI 56

Query: 67 GVD 69
            D
Sbjct: 57 TQD 59


>gi|332296626|ref|YP_004438549.1| flagellar hook-basal body protein [Thermodesulfobium narugense DSM
           14796]
 gi|332179729|gb|AEE15418.1| flagellar hook-basal body protein [Thermodesulfobium narugense DSM
           14796]
          Length = 255

 Score = 49.9 bits (117), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/133 (21%), Positives = 54/133 (40%), Gaps = 11/133 (8%)

Query: 10  IANSGLAVQSAR----MQIISENIANARTTG-DTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           +   GL VQ       +   S+N  N       +  S+    +++   ++M      +  
Sbjct: 121 VTADGLYVQGTNGNINIDTTSKNFVNFTVKPDGSVYSNFSNGQSVLDGKIMVVDFINKNA 180

Query: 65  KIGVDQSTFVEEFDPGHPVANASGI------VKYPNVNVLVETADMRETNRLYMANLQTI 118
            I V  + F    + G+PVA ++G       ++  N ++  + A++ +  R Y  N Q I
Sbjct: 181 LINVGGNNFSPSVNSGNPVALSNGYSIIQNALEGSNTDLATQMANLIDYERTYQVNAQAI 240

Query: 119 KQSHDMMTTTLDL 131
             S  M+ T + L
Sbjct: 241 TTSDSMLQTAIGL 253


>gi|311694362|gb|ADP97235.1| flagellar basal-body rod FlgF [marine bacterium HP15]
          Length = 250

 Score = 49.9 bits (117), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 15/89 (16%), Positives = 30/89 (33%)

Query: 46  RKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
           R  +          G+                 P      ASG ++  NVN + E     
Sbjct: 161 RLKLVSPPPEALEKGLDGHMRRKPDQALDGPEPPDANQRVASGFLESSNVNAVEEMISNL 220

Query: 106 ETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
           + +R Y   ++ +  +++    T  LL++
Sbjct: 221 QLSRQYEMQVKVMTTANENSEATARLLQN 249


>gi|260901953|ref|ZP_05910348.1| flagellar hook protein FlgE [Vibrio parahaemolyticus AQ4037]
 gi|308106765|gb|EFO44305.1| flagellar hook protein FlgE [Vibrio parahaemolyticus AQ4037]
          Length = 437

 Score = 49.9 bits (117), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/84 (15%), Positives = 34/84 (40%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
            +  E+ +   GG +             E + G      +G+++  N+++  E  D+   
Sbjct: 353 RVPNEQGLDKKGGTQWDSTQFSGDKIWGESNKGSFGTINNGMLEQSNIDMTQELVDLISA 412

Query: 108 NRLYMANLQTIKQSHDMMTTTLDL 131
            R + AN ++++  + +    L +
Sbjct: 413 QRNFQANSRSLEVHNQLQQNILQI 436



 Score = 38.3 bits (87), Expect = 0.36,   Method: Composition-based stats.
 Identities = 11/36 (30%), Positives = 16/36 (44%)

Query: 10 IANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ SGL+     +   S NIANA T G       + 
Sbjct: 4  VSLSGLSAAQLDLNTTSNNIANANTYGFKESRAEFA 39


>gi|226950050|ref|YP_002805141.1| flagellar basal body rod protein [Clostridium botulinum A2 str.
           Kyoto]
 gi|226841546|gb|ACO84212.1| flagellar basal body rod protein [Clostridium botulinum A2 str.
           Kyoto]
          Length = 263

 Score = 49.9 bits (117), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/110 (16%), Positives = 38/110 (34%), Gaps = 2/110 (1%)

Query: 26  SENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFV--EEFDPGHPV 83
           + NI  A     +        K +    + +  G      IG +             + V
Sbjct: 154 ANNINIAEDGSISVRDTDGLNKVVGKINIYNAVGADAFLSIGRNLYLPRDGVNVFVNNDV 213

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +   G ++  NV+   E  +M  T R +  + + IK + +M     ++ +
Sbjct: 214 SILQGFLENSNVDAGKEMTEMIITQRAFELSSRGIKTADEMWGIVNNMRK 263



 Score = 41.0 bits (94), Expect = 0.058,   Method: Composition-based stats.
 Identities = 12/61 (19%), Positives = 23/61 (37%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ +   + SGL  Q  ++  IS N+AN  T G       ++       +        R 
Sbjct: 1  MLRALWNSKSGLIAQQNKLDSISNNLANVNTVGYKREDVSFQELVQETLKRKGYPTSDRP 60

Query: 64 K 64
          +
Sbjct: 61 E 61


>gi|77165838|ref|YP_344363.1| hypothetical protein Noc_2375 [Nitrosococcus oceani ATCC 19707]
 gi|254433154|ref|ZP_05046662.1| conserved domain protein [Nitrosococcus oceani AFC27]
 gi|76884152|gb|ABA58833.1| conserved hypothetical protein [Nitrosococcus oceani ATCC 19707]
 gi|207089487|gb|EDZ66758.1| conserved domain protein [Nitrosococcus oceani AFC27]
          Length = 425

 Score = 49.9 bits (117), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/127 (16%), Positives = 43/127 (33%), Gaps = 13/127 (10%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           +    I+N+G         II  N +N    G               E+ +   G     
Sbjct: 311 LTGLDISNTG---------IIQANYSN----GQNSTLGKIALAQFPNEQGLRQLGNNAWA 357

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           +     +    E   G      +G ++  NV++  E   +    R + AN + I+ +  +
Sbjct: 358 ETVSSGTALAGEAGVGSFGLIQTGALESSNVDLTAELVHLITAQRNFQANAKAIETASTV 417

Query: 125 MTTTLDL 131
             T +++
Sbjct: 418 TDTIINI 424



 Score = 36.8 bits (83), Expect = 0.97,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 20/39 (51%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          + + + SGL   S+ + I + NIANA TTG       + 
Sbjct: 2  AFNTSLSGLNAASSDLDITANNIANASTTGFKRSRGEFA 40


>gi|327480020|gb|AEA83330.1| flagellar basal body FlaE domain-containing protein [Pseudomonas
           stutzeri DSM 4166]
          Length = 558

 Score = 49.9 bits (117), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 26/64 (40%)

Query: 68  VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
                 V     G   A  +G ++  NV +  +  ++    R Y AN +TI+    +  T
Sbjct: 494 ESGEPVVGTPGSGTLGALQAGALEDSNVELSDQLVNLIVAQRNYQANAKTIETESAITQT 553

Query: 128 TLDL 131
            ++L
Sbjct: 554 IINL 557



 Score = 36.4 bits (82), Expect = 1.3,   Method: Composition-based stats.
 Identities = 13/38 (34%), Positives = 17/38 (44%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          S +I  SGL   S  + +   NIANA T G       +
Sbjct: 2  SFNIGLSGLRAASKDLNVTGNNIANAGTVGFKQSRAEF 39


>gi|157376216|ref|YP_001474816.1| flagellar hook protein FlgE [Shewanella sediminis HAW-EB3]
 gi|157318590|gb|ABV37688.1| flagellar basal body FlaE domain protein [Shewanella sediminis
           HAW-EB3]
          Length = 454

 Score = 49.9 bits (117), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 20/113 (17%), Positives = 46/113 (40%), Gaps = 1/113 (0%)

Query: 20  ARMQIISENIANAR-TTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFD 78
             +++ ++ + NA  + G T           + E+ +   G    K      +    E +
Sbjct: 341 TNVEVGADGLINASYSNGATVALARVALARFANEQGLTQVGNTSWKASLDSGAALAGEAN 400

Query: 79  PGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G   +  S  ++  NV++  E  D+    R + AN +T++ ++ +  T L +
Sbjct: 401 SGTFGSIRSSALEQSNVDLTTELVDLISAQRNFQANSRTLEVNNTLQQTVLQI 453



 Score = 39.1 bits (89), Expect = 0.19,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 17/39 (43%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          S +IA SG+A     +   + NIAN  + G       + 
Sbjct: 2  SFNIALSGIAAAQKDLNTTANNIANVNSIGFKESRAEFA 40


>gi|301645415|ref|ZP_07245356.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 146-1]
 gi|301076299|gb|EFK91105.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 146-1]
          Length = 261

 Score = 49.9 bits (117), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 9/55 (16%), Positives = 18/55 (32%)

Query: 72  TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
                             ++  NV+++ E   M    R Y  N + +  + DM+ 
Sbjct: 201 PTEGVPGEDGLGTLQDNALEGSNVDIVNEMVAMITVQRAYEMNAKMVSAADDMLQ 255



 Score = 38.7 bits (88), Expect = 0.25,   Method: Composition-based stats.
 Identities = 15/42 (35%), Positives = 23/42 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          + A+  I+ +GL+ Q A M  I+ NIAN  TTG       ++
Sbjct: 1  MNAALWISKTGLSAQDAEMSAIANNIANVNTTGFKRDRVMFQ 42


>gi|256003243|ref|ZP_05428235.1| protein of unknown function DUF1078 domain protein [Clostridium
           thermocellum DSM 2360]
 gi|281418479|ref|ZP_06249498.1| fagellar hook-basal body protein [Clostridium thermocellum JW20]
 gi|255992934|gb|EEU03024.1| protein of unknown function DUF1078 domain protein [Clostridium
           thermocellum DSM 2360]
 gi|281407563|gb|EFB37822.1| fagellar hook-basal body protein [Clostridium thermocellum JW20]
 gi|316939268|gb|ADU73302.1| flagellar hook-basal body protein [Clostridium thermocellum DSM
           1313]
          Length = 259

 Score = 49.9 bits (117), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/102 (12%), Positives = 29/102 (28%), Gaps = 2/102 (1%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVAN--ASG 88
           N+     +      +        ++         +          E     P       G
Sbjct: 152 NSENFSVSDDGTIIQDGEAVARLLIRNFTDTTTLRKVGSNLVQRTENTQEQPFDGVVRQG 211

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            ++  NVN + E  +M    R Y AN + ++     +   ++
Sbjct: 212 YLEQSNVNSINEMINMITIMRSYEANQKILQAQDGTLEKAVN 253


>gi|208435016|ref|YP_002266682.1| flagellar hook-associated protein 1 [Helicobacter pylori G27]
 gi|208432945|gb|ACI27816.1| flagellar hook-associated protein 1 [Helicobacter pylori G27]
          Length = 606

 Score = 49.9 bits (117), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/119 (17%), Positives = 35/119 (29%), Gaps = 4/119 (3%)

Query: 19  SARMQIISEN--IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEE 76
              +  I+ N  +AN          D Y  K       +         KI  D       
Sbjct: 488 RPWLAPINGNFDVANMMQQLQYDSVDFYNDKFDIKPMKISEFYQFLTGKINTDAEKSGRI 547

Query: 77  FDPGHPV--ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            D    +        +    V+V  E  ++ +    Y AN + I     M+ T L + +
Sbjct: 548 LDTKKSMLETIKKEQLSISQVSVDEEMVNLIKFQSGYAANAKVITAIDRMIDTLLGIKQ 606



 Score = 44.5 bits (103), Expect = 0.005,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 40/111 (36%), Gaps = 9/111 (8%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M  +++S + + +GL    + + +   NI+NA         + Y R+ +  +       G
Sbjct: 1   MGGILSSLNTSYTGLQAHQSMVDVTGNNISNASD-------EFYSRQRVIAKPQAAYMYG 53

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
            +   +GVD        D            +  N     E + ++E +  +
Sbjct: 54  TKNVNMGVDIEAIERVHDEFVFSRYTKANYE--NTYYDTEFSHLKEASAYF 102


>gi|15645733|ref|NP_207910.1| flagellar hook-associated protein FlgK [Helicobacter pylori 26695]
 gi|2314271|gb|AAD08163.1| flagellar hook-associated protein 1 (HAP1) (flgK) [Helicobacter
           pylori 26695]
          Length = 606

 Score = 49.9 bits (117), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/119 (17%), Positives = 35/119 (29%), Gaps = 4/119 (3%)

Query: 19  SARMQIISEN--IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEE 76
              +  I+ N  +AN          D Y  K       +         KI  D       
Sbjct: 488 RPWLAPINGNFDVANMMQQLQYDSVDFYNDKFDIKPMKISEFYQFLTGKINTDAEKSGRI 547

Query: 77  FDPGHPV--ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            D    +        +    V+V  E  ++ +    Y AN + I     M+ T L + +
Sbjct: 548 LDTKKSMLETIKKEQLSISQVSVDEEMVNLIKFQSGYAANAKVITAIDRMIDTLLGIKQ 606



 Score = 44.9 bits (104), Expect = 0.004,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 40/111 (36%), Gaps = 9/111 (8%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M  +++S + + +GL    + + +   NI+NA         + Y R+ +  +       G
Sbjct: 1   MGGILSSLNTSYTGLQAHQSMVDVTGNNISNASD-------EFYSRQRVIAKPQAAYMYG 53

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
            +   +GVD        D            +  N     E + ++E +  +
Sbjct: 54  TKNVNMGVDVEAIERVHDEFVFARYTKANYE--NTYYDTEFSHLKEASAYF 102


>gi|227112521|ref|ZP_03826177.1| flagellar hook protein FlgE [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 400

 Score = 49.9 bits (117), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 21/41 (51%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NV++  E  +M    R Y +N QTIK    ++ T + L
Sbjct: 359 ESSNVDLSKELVNMIVAQRNYQSNAQTIKTQDSILQTLVSL 399



 Score = 36.0 bits (81), Expect = 1.7,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 24/63 (38%), Gaps = 4/63 (6%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
              A SGL   S  + +I  NIAN+ T G   G+  +               GV+V  +
Sbjct: 2  GFSQAVSGLNAASNNLDVIGNNIANSATVGFKSGTVTFA----DMFAGSKVGMGVKVASV 57

Query: 67 GVD 69
            D
Sbjct: 58 LQD 60


>gi|325288806|ref|YP_004264987.1| fagellar hook-basal body protein [Syntrophobotulus glycolicus DSM
           8271]
 gi|324964207|gb|ADY54986.1| fagellar hook-basal body protein [Syntrophobotulus glycolicus DSM
           8271]
          Length = 257

 Score = 49.9 bits (117), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 26/56 (46%), Gaps = 1/56 (1%)

Query: 79  PGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD-LLR 133
           P   V    G V+  NVN+  +   M E  R Y AN + ++ +  ++   ++ + +
Sbjct: 200 PAGEVRLKQGYVEESNVNLNAQIVKMLEVVRSYSANQKVVQTNDSLLQKAVNEIGK 255


>gi|325111114|ref|YP_004272182.1| fagellar hook-basal body protein [Planctomyces brasiliensis DSM
           5305]
 gi|324971382|gb|ADY62160.1| fagellar hook-basal body protein [Planctomyces brasiliensis DSM
           5305]
          Length = 256

 Score = 49.9 bits (117), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 31/90 (34%), Gaps = 2/90 (2%)

Query: 41  SDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVE 100
             P+    I      +  G  +V       +  V    P   +    G ++   V  + E
Sbjct: 164 GQPFVLGRIDLVHPNNPRGLEKVGDSLYRAAEGVVTAGP--ELRVRQGFLEQSGVRPITE 221

Query: 101 TADMRETNRLYMANLQTIKQSHDMMTTTLD 130
              M E++R + AN+  I+   + +   L 
Sbjct: 222 MLAMIESSRAFEANMNLIQNQDNTLGQLLQ 251



 Score = 39.5 bits (90), Expect = 0.16,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 22/45 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKT 48
          ++   + + +G  +QS R  +IS NIANA T+        +  + 
Sbjct: 1  MLYGLYQSATGADLQSLRQDVISNNIANANTSSFKRDLAIFAVRP 45


>gi|261838448|gb|ACX98214.1| flagellar hook-associated protein 1 [Helicobacter pylori 51]
          Length = 606

 Score = 49.9 bits (117), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/119 (17%), Positives = 35/119 (29%), Gaps = 4/119 (3%)

Query: 19  SARMQIISEN--IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEE 76
              +  I+ N  +AN          D Y  K       +         KI  D       
Sbjct: 488 RPWLAPINGNFDVANMMQQLQYDSVDFYNDKFDVKPMKISEFYQFLTGKINTDAEKSGRI 547

Query: 77  FDPGHPV--ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            D    +        +    V+V  E  ++ +    Y AN + I     M+ T L + +
Sbjct: 548 LDTKKSMLETIKKEQLSISQVSVDEEMVNLIKFQSGYAANAKVITAIDRMIDTLLGIKQ 606



 Score = 43.7 bits (101), Expect = 0.009,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 40/111 (36%), Gaps = 9/111 (8%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M  +++S + + +GL    + + +   NI+NA         + Y R+ +  +       G
Sbjct: 1   MGGILSSLNASYTGLQAHQSMVDVTGNNISNASD-------EFYSRQRVIAKPQEAYMYG 53

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
            +   +GVD        D            +  N     E + ++E +  +
Sbjct: 54  TKNVNMGVDVEAIERVHDEFVFSRYTKANYE--NTYYDTEFSHLKEASAYF 102


>gi|227328338|ref|ZP_03832362.1| flagellar hook protein FlgE [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
          Length = 400

 Score = 49.9 bits (117), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 21/41 (51%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NV++  E  +M    R Y +N QTIK    ++ T + L
Sbjct: 359 ESSNVDLSKELVNMIVAQRNYQSNAQTIKTQDSILQTLVSL 399



 Score = 36.0 bits (81), Expect = 1.8,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 24/63 (38%), Gaps = 4/63 (6%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
              A SGL   S  + +I  NIAN+ T G   G+  +               GV+V  +
Sbjct: 2  GFSQAVSGLNAASNNLDVIGNNIANSATVGFKSGTVTFA----DMFAGSKVGMGVKVASV 57

Query: 67 GVD 69
            D
Sbjct: 58 LQD 60


>gi|262404540|ref|ZP_06081095.1| flagellar hook protein FlgE [Vibrio sp. RC586]
 gi|262349572|gb|EEY98710.1| flagellar hook protein FlgE [Vibrio sp. RC586]
          Length = 434

 Score = 49.9 bits (117), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/84 (15%), Positives = 35/84 (41%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
            ++ E+ +   GG +             E + G   + ++G ++  N+++  E  D+   
Sbjct: 350 RVANEQGLDKKGGTQWDATQFSGDKIWGESNKGSFGSVSNGSLEQSNIDMTQELVDLISA 409

Query: 108 NRLYMANLQTIKQSHDMMTTTLDL 131
            R + AN + ++  + +    L +
Sbjct: 410 QRNFQANSRALEVHNQLQQNILQI 433



 Score = 39.5 bits (90), Expect = 0.16,   Method: Composition-based stats.
 Identities = 12/35 (34%), Positives = 16/35 (45%)

Query: 10 IANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          I+ SGL+     +   S NIANA T G       +
Sbjct: 4  ISLSGLSAAQMDLNTTSNNIANANTFGFKESRAEF 38


>gi|108563482|ref|YP_627798.1| flagellar hook-associated protein FlgK [Helicobacter pylori HPAG1]
 gi|107837255|gb|ABF85124.1| flagellar hook-associated protein 1 [Helicobacter pylori HPAG1]
          Length = 606

 Score = 49.9 bits (117), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/119 (17%), Positives = 35/119 (29%), Gaps = 4/119 (3%)

Query: 19  SARMQIISEN--IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEE 76
              +  I+ N  +AN          D Y  K       +         KI  D       
Sbjct: 488 RPWLAPINGNFDVANMMQQLQYDSVDFYNDKFDIKPMKISEFYQFLTGKINTDAEKSGRI 547

Query: 77  FDPGHPV--ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            D    +        +    V+V  E  ++ +    Y AN + I     M+ T L + +
Sbjct: 548 LDTKKSMLETIKKEQLSISQVSVDEEMVNLIKFQSGYAANAKVITAIDRMIDTLLGIKQ 606



 Score = 44.9 bits (104), Expect = 0.004,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 40/111 (36%), Gaps = 9/111 (8%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M  +++S + + +GL    + + +   NI+NA         + Y R+ +  +       G
Sbjct: 1   MGGILSSLNTSYTGLQAHQSMVDVTGNNISNASD-------EFYSRQRVIAKPQAAYMYG 53

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
            +   +GVD        D            +  N     E + ++E +  +
Sbjct: 54  TKNVNMGVDVEAIERVHDEFVFSRYTKANYE--NTYYDTEFSHLKEASAYF 102


>gi|83589650|ref|YP_429659.1| hypothetical protein Moth_0798 [Moorella thermoacetica ATCC 39073]
 gi|83572564|gb|ABC19116.1| conserved hypothetical protein [Moorella thermoacetica ATCC 39073]
          Length = 280

 Score = 49.9 bits (117), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 23/48 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            SG ++  NV++      M    R Y  N +TI+ + +M +   +L R
Sbjct: 233 RSGYLEAANVDLAATMTRMVVAQRAYELNSRTIRVADEMWSLANNLRR 280



 Score = 35.2 bits (79), Expect = 2.9,   Method: Composition-based stats.
 Identities = 20/107 (18%), Positives = 36/107 (33%), Gaps = 16/107 (14%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR--------------RKTI 49
           +I +     SG+  Q  ++  ++ +IAN  TTG       +                +  
Sbjct: 2   MIGALWRGASGMRAQQVQVDSLANDIANVNTTGYKQVRVGFSDLVYRPVMEAGMPVEQPQ 61

Query: 50  SFEEVMHGSGGVRVKKIGVD--QSTFVEEFDPGHPVANASGIVKYPN 94
           +    +    GV+V  I  D  Q   V+  +P +      G     N
Sbjct: 62  APGSTVSLGTGVKVASIVKDFSQGALVQTGEPLNLAIQGEGFFAVVN 108


>gi|317177869|dbj|BAJ55658.1| flagellar hook-associated protein FlgK [Helicobacter pylori F16]
          Length = 606

 Score = 49.9 bits (117), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/119 (17%), Positives = 36/119 (30%), Gaps = 4/119 (3%)

Query: 19  SARMQIISEN--IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEE 76
              +  I+ N  +AN          D Y  K    +  +         KI  D       
Sbjct: 488 RPWLAPINGNFDVANMMQQLQYDSVDFYNDKFDVKQMKISEFYQFLTGKINTDAEKSGRI 547

Query: 77  FDPGHPV--ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            D    +        +    V+V  E  ++ +    Y AN + I     M+ T L + +
Sbjct: 548 LDTKKSMLETIKKEQLSISQVSVDEEMVNLIKFQSGYAANAKVITAIDRMIDTLLGIKQ 606



 Score = 43.3 bits (100), Expect = 0.011,   Method: Composition-based stats.
 Identities = 16/99 (16%), Positives = 35/99 (35%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  +++S + + +GL    + + +   NI+NA     +      R +        + + G
Sbjct: 1  MGGILSSLNASYTGLQAHQSMVDVTGNNISNASDEFYSRQRVIARPQEAYMYGTKNVNMG 60

Query: 61 VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
          V V+ I      FV          N     ++ ++    
Sbjct: 61 VDVEAIERVHDEFVFSRYTKANYENTYYDTEFSHLKETS 99


>gi|218549196|ref|YP_002382987.1| flagellar hook protein FlgE [Escherichia fergusonii ATCC 35469]
 gi|218356737|emb|CAQ89365.1| flagellar hook protein [Escherichia fergusonii ATCC 35469]
          Length = 401

 Score = 49.9 bits (117), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 26/51 (50%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +     +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 350 NFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 400



 Score = 34.8 bits (78), Expect = 3.5,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 4/63 (6%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          +   A SGL   +  + +I  NIAN+ T G   G+  +               GV+V  I
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFA----DMFAGSKVGLGVKVAGI 57

Query: 67 GVD 69
            D
Sbjct: 58 TQD 60


>gi|15801193|ref|NP_287210.1| flagellar hook protein FlgE [Escherichia coli O157:H7 EDL933]
 gi|15830708|ref|NP_309481.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. Sakai]
 gi|168747148|ref|ZP_02772170.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC4113]
 gi|168758631|ref|ZP_02783638.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC4401]
 gi|168767735|ref|ZP_02792742.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC4486]
 gi|168773921|ref|ZP_02798928.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC4196]
 gi|168783606|ref|ZP_02808613.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC4076]
 gi|168790011|ref|ZP_02815018.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC869]
 gi|168802021|ref|ZP_02827028.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC508]
 gi|195935466|ref|ZP_03080848.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC4024]
 gi|208809224|ref|ZP_03251561.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC4206]
 gi|208814886|ref|ZP_03256065.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC4045]
 gi|208822570|ref|ZP_03262889.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC4042]
 gi|209395987|ref|YP_002269922.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC4115]
 gi|254792458|ref|YP_003077295.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. TW14359]
 gi|261227019|ref|ZP_05941300.1| flagellar hook protein [Escherichia coli O157:H7 str. FRIK2000]
 gi|261256253|ref|ZP_05948786.1| flagellar hook protein [Escherichia coli O157:H7 str. FRIK966]
 gi|291282096|ref|YP_003498914.1| Flagellar hook protein FlgE [Escherichia coli O55:H7 str. CB9615]
 gi|12514614|gb|AAG55822.1|AE005317_11 flagellar biosynthesis, hook protein [Escherichia coli O157:H7 str.
           EDL933]
 gi|13360918|dbj|BAB34877.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. Sakai]
 gi|187770405|gb|EDU34249.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC4196]
 gi|188018069|gb|EDU56191.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC4113]
 gi|188999079|gb|EDU68065.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC4076]
 gi|189354568|gb|EDU72987.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC4401]
 gi|189363151|gb|EDU81570.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC4486]
 gi|189370482|gb|EDU88898.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC869]
 gi|189375951|gb|EDU94367.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC508]
 gi|208729025|gb|EDZ78626.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC4206]
 gi|208731534|gb|EDZ80222.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC4045]
 gi|208738055|gb|EDZ85738.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC4042]
 gi|209157387|gb|ACI34820.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC4115]
 gi|209773378|gb|ACI85001.1| flagellar hook protein FlgE [Escherichia coli]
 gi|209773382|gb|ACI85003.1| flagellar hook protein FlgE [Escherichia coli]
 gi|209773384|gb|ACI85004.1| flagellar hook protein FlgE [Escherichia coli]
 gi|209773386|gb|ACI85005.1| flagellar hook protein FlgE [Escherichia coli]
 gi|254591858|gb|ACT71219.1| flagellar hook protein [Escherichia coli O157:H7 str. TW14359]
 gi|290761969|gb|ADD55930.1| Flagellar hook protein FlgE [Escherichia coli O55:H7 str. CB9615]
 gi|320189759|gb|EFW64415.1| Flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC1212]
 gi|320637527|gb|EFX07327.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. G5101]
 gi|320643088|gb|EFX12289.1| flagellar hook protein FlgE [Escherichia coli O157:H- str. 493-89]
 gi|320648546|gb|EFX17201.1| flagellar hook protein FlgE [Escherichia coli O157:H- str. H 2687]
 gi|320653860|gb|EFX21934.1| flagellar hook protein FlgE [Escherichia coli O55:H7 str. 3256-97
           TW 07815]
 gi|320659340|gb|EFX26909.1| flagellar hook protein FlgE [Escherichia coli O55:H7 str. USDA
           5905]
 gi|320664475|gb|EFX31626.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. LSU-61]
 gi|326339298|gb|EGD63112.1| Flagellar hook protein FlgE [Escherichia coli O157:H7 str. 1125]
 gi|326344741|gb|EGD68489.1| Flagellar hook protein FlgE [Escherichia coli O157:H7 str. 1044]
          Length = 401

 Score = 49.9 bits (117), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 26/51 (50%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +     +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 350 NFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 400



 Score = 34.8 bits (78), Expect = 3.5,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 4/63 (6%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          +   A SGL   +  + +I  NIAN+ T G   G+  +               GV+V  I
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFA----DMFAGSKVGLGVKVAGI 57

Query: 67 GVD 69
            D
Sbjct: 58 TQD 60


>gi|168234103|ref|ZP_02659161.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
 gi|194468943|ref|ZP_03074927.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|194455307|gb|EDX44146.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|205331935|gb|EDZ18699.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
          Length = 425

 Score = 49.9 bits (117), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 26/51 (50%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +     +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 374 NFGKLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 424



 Score = 35.2 bits (79), Expect = 2.8,   Method: Composition-based stats.
 Identities = 18/63 (28%), Positives = 25/63 (39%), Gaps = 4/63 (6%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          S   A SGL   +  + +I  NIAN+ T G   G+  +               GV+V  I
Sbjct: 2  SFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFA----DMFAGSKVGLGVKVAGI 57

Query: 67 GVD 69
            D
Sbjct: 58 TQD 60


>gi|149188066|ref|ZP_01866361.1| flagellar hook protein E [Vibrio shilonii AK1]
 gi|148838054|gb|EDL54996.1| flagellar hook protein E [Vibrio shilonii AK1]
          Length = 432

 Score = 49.9 bits (117), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/84 (15%), Positives = 33/84 (39%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
            ++ E+ +   GG +        +    E + G      +G ++  N+++  E  D+   
Sbjct: 348 RVANEQGLDKKGGTQWDSTTASGAKIWGESNKGSFGTINNGTLEQSNIDMTQELVDLISA 407

Query: 108 NRLYMANLQTIKQSHDMMTTTLDL 131
            R + AN + +   + +    L +
Sbjct: 408 QRNFQANSRALDVHNQLQQNILQI 431



 Score = 38.3 bits (87), Expect = 0.32,   Method: Composition-based stats.
 Identities = 17/94 (18%), Positives = 33/94 (35%), Gaps = 5/94 (5%)

Query: 10 IANSGLAVQSARMQIISENIANARTTGDTPGSDPY---RRKTISFEEVMHGSGGVRVKKI 66
          ++ SGL+     +   S NIANA T G       +      ++         GG +  KI
Sbjct: 4  VSLSGLSAAQLDLNTTSNNIANANTFGFKESRAEFGDVYSNSLFTNAKTTPGGGAQPSKI 63

Query: 67 GV--DQSTFVEEFDPGHPVANASGIVKYPNVNVL 98
               + + +   +P     + +G        ++
Sbjct: 64 AQQFHEGSSISTNNPMDLRISGTGFFAVSKDRLV 97


>gi|109947182|ref|YP_664410.1| flagellar hook-associated protein FlgK [Helicobacter acinonychis
           str. Sheeba]
 gi|109714403|emb|CAJ99411.1| flgK [Helicobacter acinonychis str. Sheeba]
          Length = 606

 Score = 49.9 bits (117), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/119 (17%), Positives = 36/119 (30%), Gaps = 4/119 (3%)

Query: 19  SARMQIISEN--IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEE 76
              +  I+ N  +AN          D Y  K    +  +         KI  D       
Sbjct: 488 RPWLAPINGNFDVANMMQQLQYDSVDFYNDKFDIKQMKISEFYQFLTSKINTDAEKSGRI 547

Query: 77  FDPGHPV--ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            D    +        +    V+V  E  ++ +    Y AN + I     M+ T L + +
Sbjct: 548 LDTKKSMLETIKKEQLSISQVSVDEEMVNLIKFQSGYAANAKVITAIDRMIDTLLGIKQ 606



 Score = 44.1 bits (102), Expect = 0.006,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 40/111 (36%), Gaps = 9/111 (8%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M  +++S + + +GL    + + +   NI+NA         + Y R+ +  +       G
Sbjct: 1   MGGILSSLNTSYTGLQAHQSMVDVTGNNISNASD-------EFYSRQRVIAKPQEAYMYG 53

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
            +   +GVD        D            +  N     E + ++E +  +
Sbjct: 54  TKNVNMGVDIEAIERVHDEFVFSRYTKANYE--NTYYDTEFSHLKEASAYF 102


>gi|331646334|ref|ZP_08347437.1| flagellar hook protein FlgE [Escherichia coli M605]
 gi|330910890|gb|EGH39400.1| flagellar hook protein FlgE [Escherichia coli AA86]
 gi|331045086|gb|EGI17213.1| flagellar hook protein FlgE [Escherichia coli M605]
          Length = 401

 Score = 49.9 bits (117), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 26/51 (50%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +     +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 350 NFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 400



 Score = 34.8 bits (78), Expect = 3.5,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 4/63 (6%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          +   A SGL   +  + +I  NIAN+ T G   G+  +               GV+V  I
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFA----DMFAGSKVGLGVKVAGI 57

Query: 67 GVD 69
            D
Sbjct: 58 TQD 60


>gi|254779670|ref|YP_003057776.1| flagellar hook-associated protein FlgK [Helicobacter pylori B38]
 gi|254001582|emb|CAX29629.1| Flagellar hook-associated protein 1 (HAP 1) (FlgK) [Helicobacter
           pylori B38]
          Length = 606

 Score = 49.9 bits (117), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/119 (17%), Positives = 35/119 (29%), Gaps = 4/119 (3%)

Query: 19  SARMQIISEN--IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEE 76
              +  I+ N  +AN          D Y  K       +         KI  D       
Sbjct: 488 RPWLAPINGNFDVANMMQQLQYDSVDFYNDKFDIKPMKISEFYQFLTGKINTDAEKSGRI 547

Query: 77  FDPGHPV--ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            D    +        +    V+V  E  ++ +    Y AN + I     M+ T L + +
Sbjct: 548 LDTKKSMLETIKKEQLSISQVSVDEEMVNLIKFQSGYAANAKVITAIDRMIDTLLGIKQ 606



 Score = 44.5 bits (103), Expect = 0.004,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 40/111 (36%), Gaps = 9/111 (8%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M  +++S + + +GL    + + +   NI+NA         + Y R+ +  +       G
Sbjct: 1   MGGILSSLNTSYTGLQAHQSMVDVTGNNISNASD-------EFYSRQRVIAKPQAAYMYG 53

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
            +   +GVD        D            +  N     E + ++E +  +
Sbjct: 54  TKNVNMGVDVEAIERVHDEFVFARYTKANYE--NTYYDTEFSHLKEASAYF 102


>gi|218704484|ref|YP_002412003.1| flagellar hook protein FlgE [Escherichia coli UMN026]
 gi|293404360|ref|ZP_06648354.1| flgE [Escherichia coli FVEC1412]
 gi|298380140|ref|ZP_06989745.1| flagellar hook protein FlgE [Escherichia coli FVEC1302]
 gi|300899595|ref|ZP_07117834.1| flagellar hook protein FlgE [Escherichia coli MS 198-1]
 gi|218431581|emb|CAR12460.1| flagellar hook protein [Escherichia coli UMN026]
 gi|291428946|gb|EFF01971.1| flgE [Escherichia coli FVEC1412]
 gi|298279838|gb|EFI21346.1| flagellar hook protein FlgE [Escherichia coli FVEC1302]
 gi|300356866|gb|EFJ72736.1| flagellar hook protein FlgE [Escherichia coli MS 198-1]
          Length = 401

 Score = 49.9 bits (117), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 26/51 (50%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +     +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 350 NFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 400



 Score = 34.8 bits (78), Expect = 3.5,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 4/63 (6%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          +   A SGL   +  + +I  NIAN+ T G   G+  +               GV+V  I
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFA----DMFAGSKVGLGVKVAGI 57

Query: 67 GVD 69
            D
Sbjct: 58 TQD 60


>gi|167038783|ref|YP_001661768.1| flagellar basal body rod protein [Thermoanaerobacter sp. X514]
 gi|256751340|ref|ZP_05492219.1| flagellar basal-body rod protein FlgF [Thermoanaerobacter
           ethanolicus CCSD1]
 gi|300913632|ref|ZP_07130949.1| flagellar basal-body rod protein FlgF [Thermoanaerobacter sp. X561]
 gi|307723353|ref|YP_003903104.1| flagellar basal-body rod protein FlgF [Thermoanaerobacter sp. X513]
 gi|166853023|gb|ABY91432.1| flagellar basal body rod protein [Thermoanaerobacter sp. X514]
 gi|256749722|gb|EEU62747.1| flagellar basal-body rod protein FlgF [Thermoanaerobacter
           ethanolicus CCSD1]
 gi|300890317|gb|EFK85462.1| flagellar basal-body rod protein FlgF [Thermoanaerobacter sp. X561]
 gi|307580414|gb|ADN53813.1| flagellar basal-body rod protein FlgF [Thermoanaerobacter sp. X513]
          Length = 251

 Score = 49.9 bits (117), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 20/45 (44%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             G ++  NVN + E  +M    R Y +N + +    + +   ++
Sbjct: 202 KQGFLEQSNVNSVKEMVNMISVMRNYESNQKVVIAFDETLGKAVN 246



 Score = 39.5 bits (90), Expect = 0.15,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 24/67 (35%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++   + A+SG+  Q+  M +++ N+AN  T G                    G      
Sbjct: 1  MLRGLYTASSGMITQTKIMDVLANNLANVNTVGYKRDVVVTSSFPNFEVTRHGGDNIPPN 60

Query: 64 KKIGVDQ 70
           KIG   
Sbjct: 61 GKIGRMD 67


>gi|317182372|dbj|BAJ60156.1| flagellar hook-associated protein FlgK [Helicobacter pylori F57]
          Length = 606

 Score = 49.9 bits (117), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/119 (17%), Positives = 35/119 (29%), Gaps = 4/119 (3%)

Query: 19  SARMQIISEN--IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEE 76
              +  I+ N  +AN          D Y  K       +         KI  D       
Sbjct: 488 RPWLAPINGNFDVANMMQQLQYDSVDFYNDKFDIKPMKISEFYQFLTGKINTDAEKSGRI 547

Query: 77  FDPGHPV--ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            D    +        +    V+V  E  ++ +    Y AN + I     M+ T L + +
Sbjct: 548 LDTKKSMLETIKKEQLSISQVSVDEEMVNLIKFQSGYAANAKVITAIDRMIDTLLGIKQ 606



 Score = 43.7 bits (101), Expect = 0.008,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 40/111 (36%), Gaps = 9/111 (8%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M  +++S + + +GL    + + +   NI+NA         + Y R+ +  +       G
Sbjct: 1   MGGILSSLNASYTGLQAHQSMVDVTGNNISNASD-------EFYSRQRVIAKPQEAYMYG 53

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
            +   +GVD        D            +  N     E + ++E +  +
Sbjct: 54  TKNVNMGVDVEAIERVHDEFVFSRYTKANYE--NTYYDTEFSHLKEASAYF 102


>gi|325529014|gb|EGD06027.1| flagellar hook protein FlgE [Burkholderia sp. TJI49]
          Length = 413

 Score = 49.9 bits (117), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/83 (16%), Positives = 30/83 (36%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +    +   GG +  +        +      +        ++  NV++  +  ++    
Sbjct: 331 FNNPNGLVNIGGNQYVETAASGVPQISAPGSTNHGTLQGSALENSNVDLTSQLVNLITAQ 390

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y AN QTIK    +  T ++L
Sbjct: 391 RNYQANAQTIKTQQTVDQTLINL 413


>gi|308273550|emb|CBX30152.1| hypothetical protein N47_D29610 [uncultured Desulfobacterium sp.]
          Length = 584

 Score = 49.9 bits (117), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/100 (26%), Positives = 39/100 (39%), Gaps = 1/100 (1%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M  L     IANS L+ Q   ++I S NIAN  T G T  +  Y  K       +    G
Sbjct: 1   MSSLGLVGDIANSALSAQRYGIEITSHNIANVNTNGYTRQNPIYEAKLPGSYSNLLLGRG 60

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVE 100
           V +  +      F+ E       ++ S   +  N   ++E
Sbjct: 61  VDISTVRRISDQFI-ENQLMQQKSDLSSYEEMENYMKVLE 99



 Score = 39.9 bits (91), Expect = 0.12,   Method: Composition-based stats.
 Identities = 9/40 (22%), Positives = 21/40 (52%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
             V++  E A++ +  + Y A  + I  + +M+ T L++ 
Sbjct: 545 SAVSLDEEMANLIKFQQAYTAAAKLISIADEMLDTLLNVK 584


>gi|331682578|ref|ZP_08383197.1| flagellar hook protein FlgE [Escherichia coli H299]
 gi|331080209|gb|EGI51388.1| flagellar hook protein FlgE [Escherichia coli H299]
          Length = 401

 Score = 49.9 bits (117), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 26/51 (50%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +     +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 350 NFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 400



 Score = 34.8 bits (78), Expect = 3.6,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 4/63 (6%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          +   A SGL   +  + +I  NIAN+ T G   G+  +               GV+V  I
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFA----DMFAGSKVGLGVKVAGI 57

Query: 67 GVD 69
            D
Sbjct: 58 TQD 60


>gi|209773380|gb|ACI85002.1| flagellar hook protein FlgE [Escherichia coli]
          Length = 401

 Score = 49.9 bits (117), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 26/51 (50%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +     +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 350 NFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 400



 Score = 34.8 bits (78), Expect = 3.6,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 4/63 (6%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          +   A SGL   +  + +I  NIAN+ T G   G+  +               GV+V  I
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFA----DMFAGSKVGLGVKVAGI 57

Query: 67 GVD 69
            D
Sbjct: 58 TQD 60


>gi|187734244|ref|YP_001880752.1| flagellar hook protein FlgE [Shigella boydii CDC 3083-94]
 gi|187431236|gb|ACD10510.1| flagellar hook protein FlgE [Shigella boydii CDC 3083-94]
          Length = 402

 Score = 49.9 bits (117), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 26/51 (50%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +     +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 351 NFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401


>gi|125975103|ref|YP_001039013.1| protein of unknown function DUF1078-like protein [Clostridium
           thermocellum ATCC 27405]
 gi|125715328|gb|ABN53820.1| protein of unknown function DUF1078-like protein [Clostridium
           thermocellum ATCC 27405]
          Length = 259

 Score = 49.9 bits (117), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/102 (12%), Positives = 29/102 (28%), Gaps = 2/102 (1%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVAN--ASG 88
           N+     +      +        ++         +          E     P       G
Sbjct: 152 NSENFSVSDDGTIIQDGEAVARLLIRNFTDTTTLRKVGSNLVQRTENTQEQPFDGVVRQG 211

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            ++  NVN + E  +M    R Y AN + ++     +   ++
Sbjct: 212 YLEQSNVNSINEMINMITIMRSYEANQKILQAQDGTLEKAVN 253


>gi|322616547|gb|EFY13456.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315996572]
 gi|322620512|gb|EFY17376.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-1]
 gi|322622506|gb|EFY19351.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-3]
 gi|322629657|gb|EFY26432.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-4]
 gi|322632623|gb|EFY29369.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-1]
 gi|322636882|gb|EFY33585.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-2]
 gi|322641580|gb|EFY38218.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. 531954]
 gi|322644070|gb|EFY40616.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. NC_MB110209-0054]
 gi|322650030|gb|EFY46448.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. OH_2009072675]
 gi|322653955|gb|EFY50278.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. CASC_09SCPH15965]
 gi|322658487|gb|EFY54749.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. 19N]
 gi|322663345|gb|EFY59547.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. 81038-01]
 gi|322670079|gb|EFY66219.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. MD_MDA09249507]
 gi|322674857|gb|EFY70948.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. 414877]
 gi|322676673|gb|EFY72740.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. 366867]
 gi|322682595|gb|EFY78614.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. 413180]
 gi|322686652|gb|EFY82631.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. 446600]
 gi|323195766|gb|EFZ80942.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609458-1]
 gi|323198342|gb|EFZ83446.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556150-1]
 gi|323203174|gb|EFZ88204.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609460]
 gi|323209177|gb|EFZ94114.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. 507440-20]
 gi|323209681|gb|EFZ94610.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556152]
 gi|323217863|gb|EGA02578.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB101509-0077]
 gi|323222151|gb|EGA06535.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB102109-0047]
 gi|323224923|gb|EGA09181.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB110209-0055]
 gi|323229665|gb|EGA13788.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB111609-0052]
 gi|323232890|gb|EGA16986.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009083312]
 gi|323240625|gb|EGA24667.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009085258]
 gi|323242939|gb|EGA26960.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315731156]
 gi|323250256|gb|EGA34145.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2009159199]
 gi|323252631|gb|EGA36469.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008282]
 gi|323258841|gb|EGA42494.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008283]
 gi|323261030|gb|EGA44623.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008284]
 gi|323266939|gb|EGA50424.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008285]
 gi|323269980|gb|EGA53429.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008287]
          Length = 403

 Score = 49.9 bits (117), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 26/51 (50%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +     +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 352 NFGKLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 402



 Score = 35.2 bits (79), Expect = 2.8,   Method: Composition-based stats.
 Identities = 18/63 (28%), Positives = 25/63 (39%), Gaps = 4/63 (6%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          S   A SGL   +  + +I  NIAN+ T G   G+  +               GV+V  I
Sbjct: 2  SFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFA----DMFAGSKVGLGVKVAGI 57

Query: 67 GVD 69
            D
Sbjct: 58 TQD 60


>gi|311280017|ref|YP_003942248.1| fagellar hook-basal body protein [Enterobacter cloacae SCF1]
 gi|308749212|gb|ADO48964.1| fagellar hook-basal body protein [Enterobacter cloacae SCF1]
          Length = 402

 Score = 49.9 bits (117), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 26/51 (50%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +     +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 351 NFGKLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401



 Score = 35.2 bits (79), Expect = 2.7,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 4/63 (6%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          +   A SGL   +  + +I  NIAN+ T G   G+  +               GV+V  I
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFA----DMFAGSKVGLGVKVAGI 57

Query: 67 GVD 69
            D
Sbjct: 58 TQD 60


>gi|75675292|ref|YP_317713.1| flagellar basal body rod protein, FlaE [Nitrobacter winogradskyi
           Nb-255]
 gi|74420162|gb|ABA04361.1| Flagellar basal body rod protein, FlaE [Nitrobacter winogradskyi
           Nb-255]
          Length = 613

 Score = 49.9 bits (117), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 23/44 (52%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  N ++  E   +  T + Y AN + I  ++ M+   L++LR
Sbjct: 570 LEGSNADIADEFTKLIVTQQAYSANTKVITTANSMVQDLLNVLR 613



 Score = 39.5 bits (90), Expect = 0.16,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 25/59 (42%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
            +  + + +  GL  QS  +Q IS NIANA+TTG    +  +             + G
Sbjct: 1  MGIFDALNTSVGGLQAQSFALQNISGNIANAQTTGYKGITTAFSDLIPDSTAPNRQAAG 59


>gi|16760053|ref|NP_455670.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 gi|16764533|ref|NP_460148.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|29142176|ref|NP_805518.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|62179694|ref|YP_216111.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|167553035|ref|ZP_02346785.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|167994041|ref|ZP_02575133.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|168264030|ref|ZP_02686003.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|168467129|ref|ZP_02700971.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|168822620|ref|ZP_02834620.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|194442954|ref|YP_002040431.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|197250199|ref|YP_002146866.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|197265088|ref|ZP_03165162.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|198245171|ref|YP_002215960.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|204930842|ref|ZP_03221715.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|205353085|ref|YP_002226886.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|207857315|ref|YP_002243966.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|213161844|ref|ZP_03347554.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Typhi str. E00-7866]
 gi|213424680|ref|ZP_03357445.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Typhi str. E02-1180]
 gi|213582037|ref|ZP_03363863.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-0664]
 gi|213648926|ref|ZP_03378979.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Typhi str. J185]
 gi|213865505|ref|ZP_03387624.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Typhi str. M223]
 gi|224584319|ref|YP_002638117.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|238911003|ref|ZP_04654840.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Tennessee str. CDC07-0191]
 gi|289806609|ref|ZP_06537238.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Typhi str. AG3]
 gi|289828580|ref|ZP_06546405.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-3139]
 gi|60392287|sp|P0A1J1|FLGE_SALTY RecName: Full=Flagellar hook protein flgE
 gi|60392288|sp|P0A1J2|FLGE_SALTI RecName: Full=Flagellar hook protein flgE
 gi|25511789|pir||AB0640 flagellar hook protein FlgE [imported] - Salmonella enterica subsp.
           enterica serovar Typhi (strain CT18)
 gi|47673|emb|CAA36022.1| flgE protein (AA 1-403) [Salmonella enterica subsp. enterica
           serovar Typhimurium]
 gi|16419694|gb|AAL20107.1| hook protein [Salmonella enterica subsp. enterica serovar
           Typhimurium str. LT2]
 gi|16502347|emb|CAD08301.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Typhi]
 gi|29137806|gb|AAO69367.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|62127327|gb|AAX65030.1| flagellar biosynthesis, hook protein [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|194401617|gb|ACF61839.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|195630413|gb|EDX49039.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|197213902|gb|ACH51299.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|197243343|gb|EDY25963.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|197939687|gb|ACH77020.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|204320301|gb|EDZ05505.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|205272866|emb|CAR37795.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|205322416|gb|EDZ10255.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|205328054|gb|EDZ14818.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|205341012|gb|EDZ27776.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|205347322|gb|EDZ33953.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|206709118|emb|CAR33451.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|224468846|gb|ACN46676.1| flagellar hook protein [Salmonella enterica subsp. enterica serovar
           Paratyphi C strain RKS4594]
 gi|261246388|emb|CBG24197.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Typhimurium str. D23580]
 gi|267992951|gb|ACY87836.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 14028S]
 gi|301157718|emb|CBW17210.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Typhimurium str. SL1344]
 gi|312912164|dbj|BAJ36138.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Typhimurium str. T000240]
 gi|320086383|emb|CBY96156.1| Flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Weltevreden str. 2007-60-3289-1]
 gi|321223795|gb|EFX48858.1| Flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Typhimurium str. TN061786]
 gi|322714164|gb|EFZ05735.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. A50]
 gi|323129447|gb|ADX16877.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 4/74]
 gi|326623708|gb|EGE30053.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Dublin str. 3246]
 gi|326628165|gb|EGE34508.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 9]
 gi|332988068|gb|AEF07051.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Typhimurium str. UK-1]
          Length = 403

 Score = 49.9 bits (117), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 26/51 (50%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +     +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 352 NFGKLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 402



 Score = 35.2 bits (79), Expect = 2.8,   Method: Composition-based stats.
 Identities = 18/63 (28%), Positives = 25/63 (39%), Gaps = 4/63 (6%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          S   A SGL   +  + +I  NIAN+ T G   G+  +               GV+V  I
Sbjct: 2  SFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFA----DMFAGSKVGLGVKVAGI 57

Query: 67 GVD 69
            D
Sbjct: 58 TQD 60


>gi|207092063|ref|ZP_03239850.1| flagellar hook-associated protein FlgK [Helicobacter pylori
           HPKX_438_AG0C1]
          Length = 606

 Score = 49.9 bits (117), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/119 (17%), Positives = 35/119 (29%), Gaps = 4/119 (3%)

Query: 19  SARMQIISEN--IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEE 76
              +  I+ N  +AN          D Y  K       +         KI  D       
Sbjct: 488 RPWLAPINGNFDVANMMQQLQYDSVDFYNDKFDIKPMKISEFYQFLTGKINTDAEKSGRI 547

Query: 77  FDPGHPV--ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            D    +        +    V+V  E  ++ +    Y AN + I     M+ T L + +
Sbjct: 548 LDTKKSMLETIKKEQLSISQVSVDEEMVNLIKFQSGYAANAKVITAIDRMIDTLLGIKQ 606



 Score = 44.1 bits (102), Expect = 0.007,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 40/111 (36%), Gaps = 9/111 (8%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M  +++S + + +GL    + + +   NI+NA         + Y R+ +  +       G
Sbjct: 1   MGGILSSLNTSYTGLQAHQSMVDVTGNNISNASD-------EFYSRQHVIAKPQAAYMYG 53

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
            +   +GVD        D            +  N     E + ++E +  +
Sbjct: 54  TKNVNMGVDVEAIERVHDEFVFSRYTKANYE--NTYYDTEFSHLKEASAYF 102


>gi|126697802|ref|YP_001086699.1| putative flagellar hook-associated protein [Clostridium difficile
           630]
 gi|115249239|emb|CAJ67052.1| Flagellar hook-associated protein FlgK (or HAP1) [Clostridium
           difficile]
          Length = 436

 Score = 49.9 bits (117), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/107 (21%), Positives = 39/107 (36%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M  L +  + ANSG+      +Q IS NI+N  T G +     +   +  +   +  S G
Sbjct: 1   MAGLFSILNTANSGMNAHQKSIQTISHNISNLDTDGYSRQRTEFATNSPMYMPSLSNSIG 60

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                 GV  +      +  +     +   KY N     +  +  ET
Sbjct: 61  RGQLGTGVHVTDVTRARNSFYDYQFRAEAHKYGNTVSKYDYYNTIET 107



 Score = 42.6 bits (98), Expect = 0.021,   Method: Composition-based stats.
 Identities = 5/38 (13%), Positives = 18/38 (47%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             V++  E  ++ +  R Y A+ + +  +  ++   ++
Sbjct: 396 SGVSLDEEMTELMKVQRSYQASAKVMSTAVQLLDVVIN 433


>gi|42522133|ref|NP_967513.1| flagellar biosynthesisprotein [Bdellovibrio bacteriovorus HD100]
 gi|39574664|emb|CAE78506.1| Flagellar biosynthesisprotein [Bdellovibrio bacteriovorus HD100]
          Length = 271

 Score = 49.9 bits (117), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 19/104 (18%), Positives = 38/104 (36%), Gaps = 4/104 (3%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPG----HPVANA 86
           N        G      + +    +++ +    ++K G    TF     P        +  
Sbjct: 162 NGAVAIADNGDVYEGTENLGKLSLVNVNNPDSLQKTGSSLYTFKPNIAPDMQNIANPSLK 221

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            G ++  NVN++ E  DM  TNR++ +  + I     M    ++
Sbjct: 222 QGFLETSNVNIVQEMTDMISTNRVFESTQKAISAYDQMADKMIN 265



 Score = 36.4 bits (82), Expect = 1.5,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 18/41 (43%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          I   + A SG   QS ++  I+ N+AN  T         ++
Sbjct: 3  IKGVYTALSGAMAQSTKLDTIANNLANVNTPAFKRDQQLFQ 43


>gi|306814075|ref|ZP_07448248.1| flagellar hook protein FlgE [Escherichia coli NC101]
 gi|305852712|gb|EFM53160.1| flagellar hook protein FlgE [Escherichia coli NC101]
          Length = 401

 Score = 49.9 bits (117), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 26/51 (50%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +     +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 350 NFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 400


>gi|289670507|ref|ZP_06491582.1| flagellar hook protein FlgE [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 262

 Score = 49.9 bits (117), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 11/83 (13%), Positives = 27/83 (32%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
               + +   G     +     +      +        SG ++   V++  +  +M    
Sbjct: 179 FVNPQGLQSQGNNMWAESYTSGAARTGAPNTSDLGQVESGSLEASTVDLTEQLVNMIVAQ 238

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R + AN Q I     +  T +++
Sbjct: 239 RNFQANSQMISTQDQVTQTIINI 261


>gi|229542504|ref|ZP_04431564.1| flagellar basal-body rod protein FlgF [Bacillus coagulans 36D1]
 gi|229326924|gb|EEN92599.1| flagellar basal-body rod protein FlgF [Bacillus coagulans 36D1]
          Length = 262

 Score = 49.9 bits (117), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 10/99 (10%), Positives = 24/99 (24%)

Query: 32  ARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVK 91
               G    +  Y                     +    +         +      G ++
Sbjct: 159 VDAAGAVTENGRYAGTIGLAYAQNPAQLEKTGDGLYTLANNGALPAAGQNGFQIKQGFLE 218

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             NV+      DM    R + AN + ++     +   ++
Sbjct: 219 SSNVDETKTMTDMMSAYRSFEANQKVLQAYDASLGKAVN 257



 Score = 41.4 bits (95), Expect = 0.039,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 28/66 (42%), Gaps = 2/66 (3%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG--GV 61
          ++   + A SG+  Q  +  +++ N++NA T G        R         M  +G  G 
Sbjct: 1  MLRGLYTAASGMIAQQRKTDLLANNLSNADTPGYKTDQSSIRSFPKMLLSYMDKNGTTGE 60

Query: 62 RVKKIG 67
           VK +G
Sbjct: 61 VVKSVG 66


>gi|78358199|ref|YP_389648.1| flagellar basal-body rod protein [Desulfovibrio desulfuricans
           subsp. desulfuricans str. G20]
 gi|78220604|gb|ABB39953.1| flagellar basal-body rod protein, putative [Desulfovibrio
           desulfuricans subsp. desulfuricans str. G20]
          Length = 260

 Score = 49.9 bits (117), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/61 (21%), Positives = 25/61 (40%), Gaps = 1/61 (1%)

Query: 74  VEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM-TTTLDLL 132
             +  P        G ++  NV V+ E  +M E NR + A  + ++ +  +    T  + 
Sbjct: 197 EAQEVPVENPVVLQGFLETANVEVVTEMVNMIEANRQFEAYQKIMQTTDAVDKMATTQVG 256

Query: 133 R 133
           R
Sbjct: 257 R 257


>gi|194432446|ref|ZP_03064733.1| flagellar hook protein FlgE [Shigella dysenteriae 1012]
 gi|194419333|gb|EDX35415.1| flagellar hook protein FlgE [Shigella dysenteriae 1012]
 gi|332092817|gb|EGI97885.1| flagellar hook protein flgE [Shigella dysenteriae 155-74]
          Length = 401

 Score = 49.9 bits (117), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 26/51 (50%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +     +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 350 NFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 400



 Score = 34.8 bits (78), Expect = 3.6,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 4/63 (6%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          +   A SGL   +  + +I  NIAN+ T G   G+  +               GV+V  I
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFA----DMFAGSKVGLGVKVAGI 57

Query: 67 GVD 69
            D
Sbjct: 58 TQD 60


>gi|168187526|ref|ZP_02622161.1| flagellar hook-associated protein FlgK [Clostridium botulinum C
          str. Eklund]
 gi|169294577|gb|EDS76710.1| flagellar hook-associated protein FlgK [Clostridium botulinum C
          str. Eklund]
          Length = 678

 Score = 49.9 bits (117), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 27/78 (34%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  L ++ ++   GL  Q   + + S NIAN+ T G T                M    G
Sbjct: 1  MSGLFSTLNVGKRGLYAQQGALDVTSHNIANSNTKGYTRQRALMETTRPFGMPSMDNQVG 60

Query: 61 VRVKKIGVDQSTFVEEFD 78
                GV+ S      D
Sbjct: 61 PGQIGTGVEISKIQRVRD 78



 Score = 44.5 bits (103), Expect = 0.005,   Method: Composition-based stats.
 Identities = 23/134 (17%), Positives = 47/134 (35%), Gaps = 7/134 (5%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGD-TPGSDPYRRKTISFEEVMHGSGG 60
           D L    +I       ++ R + I EN AN +   D T G D         +   +    
Sbjct: 550 DKLFKIQNITK-----KTTREEFIKENGANGKLNKDITLGLDTITGDINGMKIDSYFKDT 604

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V    +   ++  + +         +        V++  E A++ +    Y AN + I  
Sbjct: 605 VDKLGVQEQEAQRIVKNQGALLKEFSQRRESISGVSLNEEMANIVQYQHAYQANAKIIAT 664

Query: 121 SHDMMTTTLD-LLR 133
           +  ++   ++ L R
Sbjct: 665 TDQLLDVVINGLKR 678


>gi|332088750|gb|EGI93862.1| flagellar hook protein flgE [Shigella boydii 5216-82]
          Length = 401

 Score = 49.9 bits (117), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 26/51 (50%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +     +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 350 NFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 400


>gi|331672596|ref|ZP_08373385.1| flagellar hook protein FlgE [Escherichia coli TA280]
 gi|331070239|gb|EGI41605.1| flagellar hook protein FlgE [Escherichia coli TA280]
          Length = 401

 Score = 49.9 bits (117), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 26/51 (50%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +     +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 350 NFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 400



 Score = 34.8 bits (78), Expect = 3.6,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 4/63 (6%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          +   A SGL   +  + +I  NIAN+ T G   G+  +               GV+V  I
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFA----DMFAGSKVGLGVKVAGI 57

Query: 67 GVD 69
            D
Sbjct: 58 TQD 60


>gi|168764488|ref|ZP_02789495.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC4501]
 gi|189365520|gb|EDU83936.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC4501]
          Length = 401

 Score = 49.9 bits (117), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 26/51 (50%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +     +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 350 NFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 400



 Score = 34.8 bits (78), Expect = 3.6,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 4/63 (6%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          +   A SGL   +  + +I  NIAN+ T G   G+  +               GV+V  I
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFA----DMFAGSKVGLGVKVAGI 57

Query: 67 GVD 69
            D
Sbjct: 58 TQD 60


>gi|320107029|ref|YP_004182619.1| flagellar hook-basal body protein [Terriglobus saanensis SP1PR4]
 gi|319925550|gb|ADV82625.1| flagellar hook-basal body protein [Terriglobus saanensis SP1PR4]
          Length = 408

 Score = 49.9 bits (117), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 20/105 (19%), Positives = 38/105 (36%)

Query: 29  IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASG 88
           I    + G+T         T+S E+ +   G           S  V     G        
Sbjct: 304 ITAQFSNGNTEVLGQVALATVSNEQGLTRMGNDLYVASRASGSPNVGVAGVGGRGDIEGN 363

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NV++  E A++    R + AN +T+     +   T+ ++R
Sbjct: 364 ALELSNVDISTEFANLIVAQRAFEANSKTVTTFDTVTQDTIAMIR 408



 Score = 37.2 bits (84), Expect = 0.80,   Method: Composition-based stats.
 Identities = 15/74 (20%), Positives = 22/74 (29%), Gaps = 6/74 (8%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSD------PYRRKTISFEEVMHGS 58
          + S  IA SGL   S  +  I  N+AN  +      +                       
Sbjct: 1  MPSFSIALSGLKADSVALDTIGNNLANMNSVAYKKQNVNFSDLFYQTIGVSGANTPQQVG 60

Query: 59 GGVRVKKIGVDQST 72
           G +V  I  D + 
Sbjct: 61 LGTQVSDISTDYTQ 74


>gi|218689029|ref|YP_002397241.1| flagellar hook protein FlgE [Escherichia coli ED1a]
 gi|218426593|emb|CAR07421.1| flagellar hook protein [Escherichia coli ED1a]
          Length = 401

 Score = 49.9 bits (117), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 26/51 (50%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +     +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 350 NFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 400



 Score = 34.8 bits (78), Expect = 3.6,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 4/63 (6%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          +   A SGL   +  + +I  NIAN+ T G   G+  +               GV+V  I
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFA----DMFAGSKVGLGVKVAGI 57

Query: 67 GVD 69
            D
Sbjct: 58 TQD 60


>gi|27380965|ref|NP_772494.1| hypothetical protein bll5854 [Bradyrhizobium japonicum USDA 110]
 gi|27354131|dbj|BAC51119.1| bll5854 [Bradyrhizobium japonicum USDA 110]
          Length = 754

 Score = 49.9 bits (117), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 44/124 (35%), Gaps = 3/124 (2%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVD 69
           I  +G A    R   ++ N     T  +    D  +     F    +            +
Sbjct: 634 ITQNGYAAGQLRSVAVNNNGLVVGTFSNGQNLDLAQVSLSHFNGTNYLKALDGGAYAATE 693

Query: 70  QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
           QS    +   G    ++   ++  N ++  E   +  T + Y AN + I  ++ M+   L
Sbjct: 694 QSGPAIDGASGTISGSS---LEGSNTDIADEFTKLIVTQQAYSANTKVITTANSMVQDLL 750

Query: 130 DLLR 133
           ++LR
Sbjct: 751 NVLR 754



 Score = 36.4 bits (82), Expect = 1.3,   Method: Composition-based stats.
 Identities = 14/37 (37%), Positives = 20/37 (54%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDT 38
            +  + + +  GL  QS  +Q IS NIAN+ TTG  
Sbjct: 1  MGIFDAMNTSVGGLQAQSYALQNISGNIANSSTTGYK 37


>gi|292487939|ref|YP_003530814.1| flagellar hook protein FlgE [Erwinia amylovora CFBP1430]
 gi|292899158|ref|YP_003538527.1| flagellar hook protein FlgE [Erwinia amylovora ATCC 49946]
 gi|291199006|emb|CBJ46117.1| flagellar hook protein FlgE [Erwinia amylovora ATCC 49946]
 gi|291553361|emb|CBA20406.1| Flagellar hook protein flgE [Erwinia amylovora CFBP1430]
 gi|312172060|emb|CBX80317.1| Flagellar hook protein flgE [Erwinia amylovora ATCC BAA-2158]
          Length = 402

 Score = 49.9 bits (117), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/83 (20%), Positives = 31/83 (37%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +  E +   G                    G+     +G ++  NV++  E  +M    
Sbjct: 319 FANPEGLKSEGDNVWSSTAASGQALSGIAGTGNLGTLTAGALESSNVDLSKELVNMIVAQ 378

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y +N QTIK    ++ T ++L
Sbjct: 379 RNYQSNAQTIKTQDQILNTLVNL 401


>gi|157146226|ref|YP_001453545.1| flagellar hook protein FlgE [Citrobacter koseri ATCC BAA-895]
 gi|157083431|gb|ABV13109.1| hypothetical protein CKO_01983 [Citrobacter koseri ATCC BAA-895]
          Length = 401

 Score = 49.9 bits (117), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 26/51 (50%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +     +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 350 NFGKLTNGALESSNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 400



 Score = 35.6 bits (80), Expect = 2.5,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 4/63 (6%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          +   A SGL   +  + +I  NIAN+ T G   G+  +               GV+V  I
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFA----DMFAGSKVGLGVKVAGI 57

Query: 67 GVD 69
            D
Sbjct: 58 TQD 60


>gi|328543139|ref|YP_004303248.1| hypothetical protein SL003B_1520 [polymorphum gilvum SL003B-26A1]
 gi|326412884|gb|ADZ69947.1| Conserved domain protein [Polymorphum gilvum SL003B-26A1]
          Length = 361

 Score = 49.9 bits (117), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 12/73 (16%), Positives = 30/73 (41%)

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
            RV       +    +   G+     +  ++  N ++  E + +  T + Y AN + +  
Sbjct: 289 RRVDGSAFAATPSSGKAAYGNGGTIVANALESSNADIAAEFSKLIITQQAYSANSKVVTS 348

Query: 121 SHDMMTTTLDLLR 133
           +  M+   L+++R
Sbjct: 349 ADQMLNDALNMVR 361


>gi|56413836|ref|YP_150911.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197362759|ref|YP_002142396.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|56128093|gb|AAV77599.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197094236|emb|CAR59741.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
          Length = 403

 Score = 49.9 bits (117), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 26/51 (50%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +     +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 352 NFGKLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 402



 Score = 35.2 bits (79), Expect = 3.0,   Method: Composition-based stats.
 Identities = 18/63 (28%), Positives = 25/63 (39%), Gaps = 4/63 (6%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          S   A SGL   +  + +I  NIAN+ T G   G+  +               GV+V  I
Sbjct: 2  SFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFA----DMFAGSKVGLGVKVAGI 57

Query: 67 GVD 69
            D
Sbjct: 58 TQD 60


>gi|261339376|ref|ZP_05967234.1| flagellar hook protein FlgE [Enterobacter cancerogenus ATCC 35316]
 gi|288318177|gb|EFC57115.1| flagellar hook protein FlgE [Enterobacter cancerogenus ATCC 35316]
          Length = 402

 Score = 49.9 bits (117), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 26/51 (50%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +     +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 351 NFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401



 Score = 34.8 bits (78), Expect = 3.7,   Method: Composition-based stats.
 Identities = 18/63 (28%), Positives = 25/63 (39%), Gaps = 4/63 (6%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          +   A SGL   +  + +I  NIAN+ T G   GS  +               GV+V  I
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGSASFA----DMFAGSKVGLGVKVAGI 57

Query: 67 GVD 69
            D
Sbjct: 58 TQD 60


>gi|221635451|ref|YP_002523327.1| flagellar basal-body rod protein FlgG [Thermomicrobium roseum DSM
           5159]
 gi|221158111|gb|ACM07229.1| flagellar basal-body rod protein FlgG [Thermomicrobium roseum DSM
           5159]
          Length = 259

 Score = 49.9 bits (117), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 23/43 (53%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++ NV+++ +   +    R Y ANL++++   +++     L +
Sbjct: 217 EHSNVDLVDQMTQLIMAQRAYTANLRSLQTIDELIEIATRLRQ 259



 Score = 46.4 bits (108), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 31/105 (29%), Gaps = 6/105 (5%)

Query: 11  ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG-----VRVKK 65
           A SG+  Q  R+  I+ N+AN  T G       +         V                
Sbjct: 8   AVSGVRAQQVRLDTIAHNLANLETDGFKAARADFTAVPPQEYRVARAGEAPLGPVPIGSG 67

Query: 66  IGVDQSTFVEEFDPGHPVANASGI-VKYPNVNVLVETADMRETNR 109
           + +  +T      P     +   + +  P+  V  E  D     R
Sbjct: 68  VELSATTRQFTLGPVEVTGDPFDLALAGPDTFVATELPDGTTAFR 112


>gi|82544458|ref|YP_408405.1| flagellar hook protein FlgE [Shigella boydii Sb227]
 gi|81245869|gb|ABB66577.1| hook protein [Shigella boydii Sb227]
 gi|320186977|gb|EFW61690.1| Flagellar hook protein FlgE [Shigella flexneri CDC 796-83]
 gi|332094030|gb|EGI99082.1| flagellar hook protein flgE [Shigella boydii 3594-74]
          Length = 402

 Score = 49.9 bits (117), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 26/51 (50%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +     +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 351 NFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401



 Score = 34.8 bits (78), Expect = 3.7,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 4/63 (6%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          +   A SGL   +  + +I  NIAN+ T G   G+  +               GV+V  I
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFA----DMFAGSKVGLGVKVAGI 57

Query: 67 GVD 69
            D
Sbjct: 58 TQD 60


>gi|315296707|gb|EFU56002.1| flagellar hook protein FlgE [Escherichia coli MS 16-3]
 gi|320196442|gb|EFW71065.1| Flagellar hook protein FlgE [Escherichia coli WV_060327]
          Length = 401

 Score = 49.9 bits (117), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 26/51 (50%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +     +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 350 NFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 400



 Score = 34.8 bits (78), Expect = 3.8,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 4/63 (6%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          +   A SGL   +  + +I  NIAN+ T G   G+  +               GV+V  I
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFA----DMFAGSKVGLGVKVAGI 57

Query: 67 GVD 69
            D
Sbjct: 58 TQD 60


>gi|238762359|ref|ZP_04623330.1| Lateral flagellar hook protein (FlgE-like) [Yersinia kristensenii
           ATCC 33638]
 gi|238699344|gb|EEP92090.1| Lateral flagellar hook protein (FlgE-like) [Yersinia kristensenii
           ATCC 33638]
          Length = 397

 Score = 49.9 bits (117), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 19/43 (44%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           ++  NV++  E   +    R Y AN + I  +  MM     +L
Sbjct: 355 LEASNVDLTAELVGLMTAQRNYQANTKIISTNDSMMNALFQVL 397



 Score = 38.7 bits (88), Expect = 0.30,   Method: Composition-based stats.
 Identities = 21/88 (23%), Positives = 31/88 (35%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          S  IAN+GL+  + ++  IS NIAN+ T G   G   +       + +  G  G      
Sbjct: 2  SFSIANTGLSAVTEQLNTISNNIANSATKGFKSGRTEFSSMYAQSQPLGVGVSGTSQSIR 61

Query: 67 GVDQSTFVEEFDPGHPVANASGIVKYPN 94
                            N   +VK  N
Sbjct: 62 KEGSIDRTGNAMDLAISGNGFFVVKNSN 89


>gi|134297198|ref|YP_001120933.1| flagellar hook protein FlgE [Burkholderia vietnamiensis G4]
 gi|134140355|gb|ABO56098.1| flagellar basal body FlaE domain protein [Burkholderia
           vietnamiensis G4]
          Length = 413

 Score = 49.9 bits (117), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/73 (19%), Positives = 28/73 (38%)

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
           GG +  +        +      +        ++  NV++  +  ++    R Y AN QTI
Sbjct: 341 GGNQYAETAASGVPQISAPGSTNHGTLQGSALENSNVDLTSQLVNLITAQRNYQANAQTI 400

Query: 119 KQSHDMMTTTLDL 131
           K    +  T ++L
Sbjct: 401 KTQQTVDQTLINL 413


>gi|228984838|ref|ZP_04145009.1| Flagellar hook protein FlgE [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|229155324|ref|ZP_04283435.1| Flagellar hook protein FlgE [Bacillus cereus ATCC 4342]
 gi|228628249|gb|EEK84965.1| Flagellar hook protein FlgE [Bacillus cereus ATCC 4342]
 gi|228774890|gb|EEM23285.1| Flagellar hook protein FlgE [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
          Length = 437

 Score = 49.9 bits (117), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 12/62 (19%), Positives = 25/62 (40%)

Query: 72  TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             +                +  NV++ VE  D+    R +  N + IK S +++   ++L
Sbjct: 376 PGIGVAGENGAGNVRGSAKESSNVDLSVEFVDLMLYQRGFQGNAKVIKVSDEVLNEVVNL 435

Query: 132 LR 133
           +R
Sbjct: 436 IR 437



 Score = 40.2 bits (92), Expect = 0.085,   Method: Composition-based stats.
 Identities = 14/69 (20%), Positives = 30/69 (43%), Gaps = 6/69 (8%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I + + + +G+      + + S NIANA+T G        ++K I  + + + + G R 
Sbjct: 1  MIKALYTSITGMNAAQNALSVTSNNIANAQTVG------YKKQKAIFDDLLYNNTVGSRG 54

Query: 64 KKIGVDQST 72
                 + 
Sbjct: 55 DGAYAGTNP 63


>gi|289208116|ref|YP_003460182.1| flagellar basal-body rod protein FlgG [Thioalkalivibrio sp. K90mix]
 gi|288943747|gb|ADC71446.1| flagellar basal-body rod protein FlgG [Thioalkalivibrio sp. K90mix]
          Length = 262

 Score = 49.9 bits (117), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 24/78 (30%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +   G    ++          +           G ++  NVN+  E  +M ET 
Sbjct: 178 FVNPAGLQAIGENLFQETAASGVAQQAQPGLNGTGTLVQGSLETSNVNIAEELVNMIETQ 237

Query: 109 RLYMANLQTIKQSHDMMT 126
           R Y  N + I  +   + 
Sbjct: 238 RAYEVNSKAISAADQSLQ 255



 Score = 45.2 bits (105), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 20/41 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  +  IA +GL  Q  RM  +S N+AN  TTG       +
Sbjct: 1  MNQALWIAKTGLDAQHTRMSTVSNNLANVNTTGFKKDRAVF 41


>gi|254255087|ref|ZP_04948404.1| Flagellar hook protein FlgE [Burkholderia dolosa AUO158]
 gi|124899732|gb|EAY71575.1| Flagellar hook protein FlgE [Burkholderia dolosa AUO158]
          Length = 419

 Score = 49.9 bits (117), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 8/41 (19%), Positives = 20/41 (48%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           ++  NV +  E  ++    + Y AN + +   ++M+ T + 
Sbjct: 377 LEQSNVELTEELVNLMSAQQNYQANSKVLSTENEMVRTLMQ 417



 Score = 35.2 bits (79), Expect = 3.4,   Method: Composition-based stats.
 Identities = 15/38 (39%), Positives = 22/38 (57%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          S +IA SG+   + ++  IS+NIANA T G   G   +
Sbjct: 30 SFNIALSGIKAINGQLGEISQNIANAGTYGYKAGRANF 67


>gi|118477189|ref|YP_894340.1| flagellar hook protein FlgE [Bacillus thuringiensis str. Al Hakam]
 gi|225863612|ref|YP_002748990.1| putative flagellar hook protein FlgE [Bacillus cereus 03BB102]
 gi|229183945|ref|ZP_04311161.1| Flagellar hook protein FlgE [Bacillus cereus BGSC 6E1]
 gi|118416414|gb|ABK84833.1| flagellar hook protein [Bacillus thuringiensis str. Al Hakam]
 gi|225790448|gb|ACO30665.1| putative flagellar hook protein FlgE [Bacillus cereus 03BB102]
 gi|228599597|gb|EEK57201.1| Flagellar hook protein FlgE [Bacillus cereus BGSC 6E1]
          Length = 437

 Score = 49.9 bits (117), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 12/62 (19%), Positives = 25/62 (40%)

Query: 72  TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             +                +  NV++ VE  D+    R +  N + IK S +++   ++L
Sbjct: 376 PGIGVAGENGAGNVRGSAKESSNVDLSVEFVDLMLYQRGFQGNAKVIKVSDEVLNEVVNL 435

Query: 132 LR 133
           +R
Sbjct: 436 IR 437



 Score = 40.2 bits (92), Expect = 0.084,   Method: Composition-based stats.
 Identities = 14/69 (20%), Positives = 30/69 (43%), Gaps = 6/69 (8%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I + + + +G+      + + S NIANA+T G        ++K I  + + + + G R 
Sbjct: 1  MIKALYTSITGMNAAQNALSVTSNNIANAQTVG------YKKQKAIFDDLLYNNTVGSRG 54

Query: 64 KKIGVDQST 72
                 + 
Sbjct: 55 DGAYAGTNP 63


>gi|37525841|ref|NP_929185.1| flagellar hook protein FlgE [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|36785270|emb|CAE14211.1| Flagellar hook protein FlgE [Photorhabdus luminescens subsp.
           laumondii TTO1]
          Length = 404

 Score = 49.9 bits (117), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 27/60 (45%)

Query: 72  TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             V   D G      SG ++  NV++  E  +M    R Y ++ QTIK    ++ T + +
Sbjct: 344 PVVGIADSGGFGKLLSGSLEASNVDMSQELVNMIVAQRNYQSSAQTIKTQDQILQTLVSM 403



 Score = 35.6 bits (80), Expect = 2.3,   Method: Composition-based stats.
 Identities = 12/38 (31%), Positives = 18/38 (47%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +   A SGL   +  + +I  NIANA T G    +  +
Sbjct: 2  AFSQAVSGLNAAAGNLDVIGNNIANAATYGFKSSTVAF 39


>gi|310767290|gb|ADP12240.1| flagellar hook protein FlgE [Erwinia sp. Ejp617]
          Length = 402

 Score = 49.9 bits (117), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 26/51 (50%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +     +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 351 NLGTLTAGALESSNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401


>gi|228914332|ref|ZP_04077947.1| Flagellar hook protein FlgE [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|228845326|gb|EEM90362.1| Flagellar hook protein FlgE [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
          Length = 437

 Score = 49.9 bits (117), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/62 (20%), Positives = 25/62 (40%)

Query: 72  TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             V                +  NV++ VE  D+    R +  N + IK S +++   ++L
Sbjct: 376 PGVGVAGENGAGNVRGSAKESSNVDLSVEFVDLMLYQRGFQGNAKVIKVSDEVLNEVVNL 435

Query: 132 LR 133
           +R
Sbjct: 436 IR 437



 Score = 40.2 bits (92), Expect = 0.093,   Method: Composition-based stats.
 Identities = 14/69 (20%), Positives = 30/69 (43%), Gaps = 6/69 (8%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I + + + +G+      + + S NIANA+T G        ++K I  + + + + G R 
Sbjct: 1  MIKALYTSITGMNAAQNALSVTSNNIANAQTVG------YKKQKAIFDDLLYNNTVGSRG 54

Query: 64 KKIGVDQST 72
                 + 
Sbjct: 55 DGAYAGTNP 63


>gi|170722892|ref|YP_001750580.1| flagellar hook protein FlgE [Pseudomonas putida W619]
 gi|169760895|gb|ACA74211.1| flagellar basal body FlaE domain protein [Pseudomonas putida W619]
          Length = 451

 Score = 49.9 bits (117), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/83 (21%), Positives = 35/83 (42%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            + E+ +   GG R  +        ++E   G   +  S  ++  NVN+  E  ++ +  
Sbjct: 368 FANEQGLQQIGGTRWTETFSSGLPGIDEPKTGTLGSVESNALEASNVNLTQELVELIKAQ 427

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
             Y AN +TI     +M T + +
Sbjct: 428 SNYQANAKTISTESTIMQTIIQM 450



 Score = 35.2 bits (79), Expect = 3.2,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 18/39 (46%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          S +I  SGL   + ++ +   NIAN  TTG       + 
Sbjct: 2  SFNIGLSGLYAANKQLDVTGNNIANVNTTGFKSSRAEFA 40


>gi|149927798|ref|ZP_01916049.1| flagellar hook protein E [Limnobacter sp. MED105]
 gi|149823420|gb|EDM82651.1| flagellar hook protein E [Limnobacter sp. MED105]
          Length = 437

 Score = 49.9 bits (117), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/127 (18%), Positives = 37/127 (29%), Gaps = 13/127 (10%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
            A   +   G+         IS   AN +                   E +   G     
Sbjct: 323 FAGFDVGADGML-------TIS--YANGQLVNHAQIGLYRFPNP----EGLQPVGSNGWL 369

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
                    V   +        SG ++  N+++  E   M    R+Y AN QTIK    +
Sbjct: 370 ATNSSGPELVSLSEDTAFGIIQSGALEESNIDLTAELVAMISAQRVYQANSQTIKTQDSI 429

Query: 125 MTTTLDL 131
             T  +L
Sbjct: 430 FQTITNL 436


>gi|148380595|ref|YP_001255136.1| flagellar basal body rod protein [Clostridium botulinum A str. ATCC
           3502]
 gi|153933262|ref|YP_001384882.1| flagellar basal body rod protein FlgG [Clostridium botulinum A str.
           ATCC 19397]
 gi|153935902|ref|YP_001388351.1| flagellar basal body rod protein FlgG [Clostridium botulinum A str.
           Hall]
 gi|168180938|ref|ZP_02615602.1| flagellar basal body rod protein [Clostridium botulinum NCTC 2916]
 gi|148290079|emb|CAL84198.1| putative flagellar basal-body rod protein [Clostridium botulinum A
           str. ATCC 3502]
 gi|152929306|gb|ABS34806.1| flagellar basal body rod protein [Clostridium botulinum A str. ATCC
           19397]
 gi|152931816|gb|ABS37315.1| flagellar basal body rod protein [Clostridium botulinum A str.
           Hall]
 gi|182668229|gb|EDT80208.1| flagellar basal body rod protein [Clostridium botulinum NCTC 2916]
          Length = 263

 Score = 49.5 bits (116), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/110 (16%), Positives = 38/110 (34%), Gaps = 2/110 (1%)

Query: 26  SENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFV--EEFDPGHPV 83
           + NI  A     +        K +    + +  G      IG +             + V
Sbjct: 154 ANNINIAEDGSISVRDTDGLNKVVGKINIYNAVGADAFLSIGRNLYLPRDGVNVFVNNDV 213

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +   G ++  NV+   E  +M  T R +  + + IK + +M     ++ +
Sbjct: 214 SILQGFLENSNVDAGKEMTEMIITQRAFELSSRGIKTADEMWGIVNNMRK 263



 Score = 40.6 bits (93), Expect = 0.069,   Method: Composition-based stats.
 Identities = 12/61 (19%), Positives = 23/61 (37%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ +   + SGL  Q  ++  IS N+AN  T G       ++       +        R 
Sbjct: 1  MLRALWNSKSGLIAQQNKLDSISNNLANVNTVGYKREDVSFQELVQETLKRKGYPTSDRP 60

Query: 64 K 64
          +
Sbjct: 61 E 61


>gi|307310146|ref|ZP_07589796.1| fagellar hook-basal body protein [Escherichia coli W]
 gi|306909864|gb|EFN40358.1| fagellar hook-basal body protein [Escherichia coli W]
 gi|315060354|gb|ADT74681.1| flagellar hook protein [Escherichia coli W]
 gi|320200972|gb|EFW75556.1| Flagellar hook protein FlgE [Escherichia coli EC4100B]
 gi|323379085|gb|ADX51353.1| fagellar hook-basal body protein [Escherichia coli KO11]
          Length = 402

 Score = 49.5 bits (116), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 26/51 (50%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +     +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 351 NFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401



 Score = 34.8 bits (78), Expect = 4.0,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 4/63 (6%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          +   A SGL   +  + +I  NIAN+ T G   G+  +               GV+V  I
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFA----DMFAGSKVGLGVKVAGI 57

Query: 67 GVD 69
            D
Sbjct: 58 TQD 60


>gi|238028849|ref|YP_002913080.1| flagellar hook protein FlgE [Burkholderia glumae BGR1]
 gi|237878043|gb|ACR30376.1| Hypothetical protein bglu_1g33140 [Burkholderia glumae BGR1]
          Length = 412

 Score = 49.5 bits (116), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 15/83 (18%), Positives = 29/83 (34%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +  + +   GG +  +        +      +         +   V++  E  ++    
Sbjct: 330 FNDPQGLTSIGGNQYIQTAASGVPQIGVPGSTNHGTIKGSTTENSTVDLTGELVNLITAQ 389

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y AN QTIK    +  T L+L
Sbjct: 390 RNYQANAQTIKTQQTVDQTLLNL 412


>gi|222032829|emb|CAP75568.1| flagellar hook protein flgE [Escherichia coli LF82]
 gi|312945638|gb|ADR26465.1| flagellar hook protein FlgE [Escherichia coli O83:H1 str. NRG 857C]
          Length = 401

 Score = 49.5 bits (116), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 26/51 (50%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +     +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 350 NFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 400



 Score = 34.8 bits (78), Expect = 3.9,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 4/63 (6%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          +   A SGL   +  + +I  NIAN+ T G   G+  +               GV+V  I
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFA----DMFAGSKVGLGVKVAGI 57

Query: 67 GVD 69
            D
Sbjct: 58 TQD 60


>gi|148976394|ref|ZP_01813100.1| flagellar hook protein E [Vibrionales bacterium SWAT-3]
 gi|145964217|gb|EDK29473.1| flagellar hook protein E [Vibrionales bacterium SWAT-3]
          Length = 434

 Score = 49.5 bits (116), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/84 (15%), Positives = 34/84 (40%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
            +  E+ +   GG +             E + G   +  +G ++  N+++  E  D+   
Sbjct: 350 RVPNEQGLDKKGGTQWDSTNDSGDKIWGESNKGSFGSINNGSLEQSNIDMTQELVDLISA 409

Query: 108 NRLYMANLQTIKQSHDMMTTTLDL 131
            R + AN ++++  + +    L +
Sbjct: 410 QRNFQANSRSLEVHNQLQQNILQI 433



 Score = 40.6 bits (93), Expect = 0.073,   Method: Composition-based stats.
 Identities = 17/97 (17%), Positives = 34/97 (35%), Gaps = 5/97 (5%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPY---RRKTISFEEVMHGSGGVRVKKI 66
           +A SGL+     +   S NIANA T G       +      ++         GG +  ++
Sbjct: 4   VALSGLSAAQLDLNTTSNNIANANTFGFKESRAEFGDVYSNSLFTNAKTTSGGGAQASQV 63

Query: 67  GV--DQSTFVEEFDPGHPVANASGIVKYPNVNVLVET 101
                + + +   +P     + +G        ++ E 
Sbjct: 64  AQQFHEGSSIYTNNPMDLRVSGTGFFAVAKDRMVPEI 100


>gi|27464952|gb|AAN63049.1| flagellar component FlgE [Vibrio vulnificus]
          Length = 434

 Score = 49.5 bits (116), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/84 (16%), Positives = 33/84 (39%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
            +  E+ +   GG +             E + G     +SG ++  N+++  E  D+   
Sbjct: 350 RVPNEQGLDKKGGTQWNSTNNSGDKIWGESNKGSFGTVSSGALEQSNIDMTQELVDLISA 409

Query: 108 NRLYMANLQTIKQSHDMMTTTLDL 131
            R + AN + ++  + +    L +
Sbjct: 410 QRNFQANSRALEVHNQLQQNILQI 433



 Score = 38.3 bits (87), Expect = 0.35,   Method: Composition-based stats.
 Identities = 11/35 (31%), Positives = 16/35 (45%)

Query: 10 IANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          ++ SGL+     +   S NIANA T G       +
Sbjct: 4  VSLSGLSAAQLDLNTTSNNIANANTYGFKESRAEF 38


>gi|86146155|ref|ZP_01064481.1| flagellar hook protein [Vibrio sp. MED222]
 gi|218708804|ref|YP_002416425.1| flagellar hook protein FlgE [Vibrio splendidus LGP32]
 gi|85836102|gb|EAQ54234.1| flagellar hook protein [Vibrio sp. MED222]
 gi|218321823|emb|CAV17792.1| Flagellar hook protein flgE [Vibrio splendidus LGP32]
          Length = 434

 Score = 49.5 bits (116), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/84 (15%), Positives = 33/84 (39%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
            +  E  +   GG +             E + G   +  +G ++  N+++  E  D+   
Sbjct: 350 RVPNEHGLDKKGGTQWDSTNASGDKIWGESNKGSFGSINNGSLEQSNIDMTQELVDLISA 409

Query: 108 NRLYMANLQTIKQSHDMMTTTLDL 131
            R + AN ++++  + +    L +
Sbjct: 410 QRNFQANSRSLEVHNQLQQNILQI 433



 Score = 42.6 bits (98), Expect = 0.016,   Method: Composition-based stats.
 Identities = 16/97 (16%), Positives = 34/97 (35%), Gaps = 5/97 (5%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPY---RRKTISFEEVMHGSGGVRVKKI 66
           ++ SGL+     +   S NIANA T G       +      ++         GG +  ++
Sbjct: 4   VSLSGLSAAQLDLNTTSNNIANANTFGFKESRAEFGDVYSSSLFTNAKTTPGGGAQASQV 63

Query: 67  GV--DQSTFVEEFDPGHPVANASGIVKYPNVNVLVET 101
                + + +   +P     + +G        ++ E 
Sbjct: 64  AQQFHEGSSIYTNNPMDLRVSGTGFFAVSKDRMVPEI 100


>gi|110641252|ref|YP_668982.1| flagellar hook protein FlgE [Escherichia coli 536]
 gi|191172366|ref|ZP_03033907.1| flagellar hook protein FlgE [Escherichia coli F11]
 gi|300982621|ref|ZP_07176205.1| flagellar hook protein FlgE [Escherichia coli MS 200-1]
 gi|110342844|gb|ABG69081.1| flagellar hook protein FlgE [Escherichia coli 536]
 gi|190907250|gb|EDV66848.1| flagellar hook protein FlgE [Escherichia coli F11]
 gi|300307086|gb|EFJ61606.1| flagellar hook protein FlgE [Escherichia coli MS 200-1]
 gi|324013350|gb|EGB82569.1| flagellar hook protein FlgE [Escherichia coli MS 60-1]
          Length = 401

 Score = 49.5 bits (116), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 26/51 (50%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +     +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 350 NFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 400


>gi|16129039|ref|NP_415594.1| flagellar hook protein [Escherichia coli str. K-12 substr. MG1655]
 gi|89107922|ref|AP_001702.1| flagellar hook protein [Escherichia coli str. K-12 substr. W3110]
 gi|170080727|ref|YP_001730047.1| flagellar hook protein [Escherichia coli str. K-12 substr. DH10B]
 gi|188492271|ref|ZP_02999541.1| flagellar hook protein FlgE [Escherichia coli 53638]
 gi|238900330|ref|YP_002926126.1| flagellar hook protein [Escherichia coli BW2952]
 gi|256023226|ref|ZP_05437091.1| flagellar hook protein FlgE [Escherichia sp. 4_1_40B]
 gi|300950171|ref|ZP_07164116.1| flagellar hook protein FlgE [Escherichia coli MS 116-1]
 gi|300954384|ref|ZP_07166838.1| flagellar hook protein FlgE [Escherichia coli MS 175-1]
 gi|301029709|ref|ZP_07192763.1| flagellar hook protein FlgE [Escherichia coli MS 196-1]
 gi|301644988|ref|ZP_07244954.1| flagellar hook protein FlgE [Escherichia coli MS 146-1]
 gi|307137711|ref|ZP_07497067.1| flagellar hook protein FlgE [Escherichia coli H736]
 gi|331641620|ref|ZP_08342755.1| flagellar hook protein FlgE [Escherichia coli H736]
 gi|2494529|sp|P75937|FLGE_ECOLI RecName: Full=Flagellar hook protein flgE
 gi|1787316|gb|AAC74160.1| flagellar hook protein [Escherichia coli str. K-12 substr. MG1655]
 gi|85674830|dbj|BAA35885.2| flagellar hook protein [Escherichia coli str. K12 substr. W3110]
 gi|169888562|gb|ACB02269.1| flagellar hook protein [Escherichia coli str. K-12 substr. DH10B]
 gi|188487470|gb|EDU62573.1| flagellar hook protein FlgE [Escherichia coli 53638]
 gi|238861108|gb|ACR63106.1| flagellar hook protein [Escherichia coli BW2952]
 gi|260449784|gb|ACX40206.1| flagellar basal body FlaE domain protein [Escherichia coli DH1]
 gi|299877397|gb|EFI85608.1| flagellar hook protein FlgE [Escherichia coli MS 196-1]
 gi|300318620|gb|EFJ68404.1| flagellar hook protein FlgE [Escherichia coli MS 175-1]
 gi|300450518|gb|EFK14138.1| flagellar hook protein FlgE [Escherichia coli MS 116-1]
 gi|301076717|gb|EFK91523.1| flagellar hook protein FlgE [Escherichia coli MS 146-1]
 gi|309701348|emb|CBJ00649.1| flagellar hook protein FlgE [Escherichia coli ETEC H10407]
 gi|315135708|dbj|BAJ42867.1| flagellar hook protein FlgE [Escherichia coli DH1]
 gi|315618246|gb|EFU98836.1| flagellar hook protein flgE [Escherichia coli 3431]
 gi|323937816|gb|EGB34080.1| fagellar hook-basal body protein [Escherichia coli E1520]
 gi|323942545|gb|EGB38712.1| fagellar hook-basal body protein [Escherichia coli E482]
 gi|331038418|gb|EGI10638.1| flagellar hook protein FlgE [Escherichia coli H736]
 gi|332342622|gb|AEE55956.1| flagellar hook protein FlgE [Escherichia coli UMNK88]
          Length = 402

 Score = 49.5 bits (116), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 26/51 (50%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +     +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 351 NFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401



 Score = 34.8 bits (78), Expect = 4.1,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 4/63 (6%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          +   A SGL   +  + +I  NIAN+ T G   G+  +               GV+V  I
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFA----DMFAGSKVGLGVKVAGI 57

Query: 67 GVD 69
            D
Sbjct: 58 TQD 60


>gi|332673917|gb|AEE70734.1| flagellar hook-associated protein FlgK [Helicobacter pylori 83]
          Length = 606

 Score = 49.5 bits (116), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/119 (17%), Positives = 35/119 (29%), Gaps = 4/119 (3%)

Query: 19  SARMQIISEN--IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEE 76
              +  I+ N  +AN          D Y  K       +         KI  D       
Sbjct: 488 RPWLAPINGNFDVANMMQQLQYDSVDFYNDKFDIKPMKISEFYQFLTGKINTDAEKSGRI 547

Query: 77  FDPGHPV--ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            D    +        +    V+V  E  ++ +    Y AN + I     M+ T L + +
Sbjct: 548 LDTKKSMLETIKKEQLSISQVSVDEEMVNLIKFQSGYAANAKVITAIDRMIDTLLGIKQ 606



 Score = 44.5 bits (103), Expect = 0.005,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 40/111 (36%), Gaps = 9/111 (8%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M  +++S + + +GL    + + +   NI+NA         + Y R+ +  +       G
Sbjct: 1   MGGILSSLNTSYTGLQAHQSMVDVTGNNISNASD-------EFYSRQRVIAKPQAAYMYG 53

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
            +   +GVD        D            +  N     E + ++E +  +
Sbjct: 54  TKNVNMGVDVEAIERVHDEFVFARYTKANYE--NTYYDTEFSHLKEASAYF 102


>gi|259908812|ref|YP_002649168.1| flagellar hook protein FlgE [Erwinia pyrifoliae Ep1/96]
 gi|224964434|emb|CAX55943.1| Flagellar biosynthesis, hook protein [Erwinia pyrifoliae Ep1/96]
 gi|283478794|emb|CAY74710.1| flgE [Erwinia pyrifoliae DSM 12163]
          Length = 402

 Score = 49.5 bits (116), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 26/51 (50%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +     +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 351 NLGTLTAGALESSNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401


>gi|222099583|ref|YP_002534151.1| Flagellar hook-associated protein 1 [Thermotoga neapolitana DSM
           4359]
 gi|221571973|gb|ACM22785.1| Flagellar hook-associated protein 1 [Thermotoga neapolitana DSM
           4359]
          Length = 860

 Score = 49.5 bits (116), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/105 (15%), Positives = 39/105 (37%), Gaps = 1/105 (0%)

Query: 30  ANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK-KIGVDQSTFVEEFDPGHPVANASG 88
           AN +           +  +   E      GGV  +  +  + ++ ++           + 
Sbjct: 756 ANPKLLEMVQNLYTRKMLSNGKESFYEFFGGVVAELGVEAETASSLKTNTEILRQEIDNE 815

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             +   V++  E A+M E    + A  + I    +M+ T ++++R
Sbjct: 816 RERVKGVSLDEEMANMIEYQHAFSAAAKVISTVDEMIQTVINMVR 860



 Score = 41.8 bits (96), Expect = 0.035,   Method: Composition-based stats.
 Identities = 17/110 (15%), Positives = 35/110 (31%), Gaps = 11/110 (10%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV------- 54
             +    + A +G+      M ++  NIANA T G +                       
Sbjct: 6   MSMFGILNTALTGIYTHKLAMNVVGHNIANANTPGYSRQRPVIEATPPIPLTTLTQPSIP 65

Query: 55  MHGSGGVRVKKIGVDQSTF--VEEFDPGHPVANASGIVKYPNVNVLVETA 102
           +    G RV+ I   +  F  ++     +       I+   N++ + +  
Sbjct: 66  LQMGTGSRVRTIVRLRDAFLDIQYRQVNNRYNYWDTIL--SNLHFIEQLL 113


>gi|92116886|ref|YP_576615.1| flagellar basal body FlaE [Nitrobacter hamburgensis X14]
 gi|91799780|gb|ABE62155.1| flagellar basal body FlaE [Nitrobacter hamburgensis X14]
          Length = 615

 Score = 49.5 bits (116), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 30/67 (44%), Gaps = 3/67 (4%)

Query: 67  GVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
             D+S        GH   ++   ++  N ++  E   +  T + Y AN + I  ++ M+ 
Sbjct: 552 VTDESGPAIAGAAGHINGSS---LEGSNTDIADEFTKLIVTQQAYSANTKVITTANSMVQ 608

Query: 127 TTLDLLR 133
             L++LR
Sbjct: 609 DLLNVLR 615



 Score = 38.3 bits (87), Expect = 0.39,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 24/59 (40%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
            +  + + +  GL  QS  +Q IS NIANA+TTG    +  +               G
Sbjct: 1  MGIFDALNTSVGGLQAQSFALQNISGNIANAQTTGYKGITTAFSDLIPDSTAPNRQVAG 59


>gi|82777309|ref|YP_403658.1| flagellar hook protein FlgE [Shigella dysenteriae Sd197]
 gi|309788143|ref|ZP_07682749.1| flagellar hook protein flgE [Shigella dysenteriae 1617]
 gi|81241457|gb|ABB62167.1| hook protein [Shigella dysenteriae Sd197]
 gi|308923995|gb|EFP69496.1| flagellar hook protein flgE [Shigella dysenteriae 1617]
          Length = 402

 Score = 49.5 bits (116), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 26/51 (50%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +     +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 351 NFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401



 Score = 34.8 bits (78), Expect = 4.1,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 4/63 (6%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          +   A SGL   +  + +I  NIAN+ T G   G+  +               GV+V  I
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFA----DMFAGSKVGLGVKVAGI 57

Query: 67 GVD 69
            D
Sbjct: 58 TQD 60


>gi|89895709|ref|YP_519196.1| hypothetical protein DSY2963 [Desulfitobacterium hafniense Y51]
 gi|89335157|dbj|BAE84752.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 312

 Score = 49.5 bits (116), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/134 (15%), Positives = 42/134 (31%), Gaps = 2/134 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
           D L  +  +      VQ +   ++S  I  +R T        +        +  +     
Sbjct: 179 DILPTAFAVPEGAEDVQISTEGVLSATIDGSRQTLGQINIVTFANPEGLVRDGDNLYFAP 238

Query: 62  RVKKIGVDQ--STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
               +  D+   T   + +        +  ++  NVN+     +M +  R Y  N + I 
Sbjct: 239 DTAGVTGDELVGTPGSQVEERTLGKLRTQSLEGSNVNLASAMTEMIQVQRAYQLNARMIT 298

Query: 120 QSHDMMTTTLDLLR 133
               M +    L R
Sbjct: 299 NGDQMWSMANSLRR 312


>gi|317011316|gb|ADU85063.1| flagellar hook-associated protein FlgK [Helicobacter pylori
           SouthAfrica7]
          Length = 606

 Score = 49.5 bits (116), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/119 (17%), Positives = 35/119 (29%), Gaps = 4/119 (3%)

Query: 19  SARMQIISEN--IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEE 76
              +  I+ N  +AN          D Y  K       +         KI  D       
Sbjct: 488 RPWLAPINGNFDVANMMQQLQYDSVDFYNDKFDIKPMKISEFYQFLTGKINTDAEKSGRI 547

Query: 77  FDPGHPV--ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            D    +        +    V+V  E  ++ +    Y AN + I     M+ T L + +
Sbjct: 548 LDTKKSMLETIKKEQLSISQVSVDEEMVNLIKFQSGYAANAKVITAIDRMIDTLLGIKQ 606



 Score = 46.4 bits (108), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 40/111 (36%), Gaps = 9/111 (8%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M  +++S + + +GL    + M +   NI+NA         + Y R+ +  +       G
Sbjct: 1   MGGILSSLNTSYTGLQAHQSMMDVTGNNISNASD-------EFYSRQRVIAKPQAAYMYG 53

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
            +   +GVD        D            +  N     E + ++E +  +
Sbjct: 54  TKNVNMGVDVEAIERVHDEFVFSRYTKANYE--NTYYDTEFSHLKEASAYF 102


>gi|262276417|ref|ZP_06054226.1| flagellar hook protein FlgE [Grimontia hollisae CIP 101886]
 gi|262220225|gb|EEY71541.1| flagellar hook protein FlgE [Grimontia hollisae CIP 101886]
          Length = 435

 Score = 49.5 bits (116), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/98 (17%), Positives = 38/98 (38%)

Query: 34  TTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
           + G+           +S ++ +  +G  + K           E   G      SG ++  
Sbjct: 337 SNGENVALGRVAMVRVSNQQGLSQAGNTQWKVTQQSGEAIWGEAMQGAFGKVKSGTIEQS 396

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           N+++  E  D+    R + AN ++++  + M  T L +
Sbjct: 397 NIDMTQELVDLITAQRNFQANSRSLEVGNQMQQTILQI 434



 Score = 42.9 bits (99), Expect = 0.016,   Method: Composition-based stats.
 Identities = 21/99 (21%), Positives = 35/99 (35%), Gaps = 5/99 (5%)

Query: 7   SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY---RRKTISFEEVMHGSGGVRV 63
           + +IA SGLA     M   S NIANA T G       +      +I          GV+ 
Sbjct: 2   ALNIALSGLAAAQKDMNTTSNNIANANTFGFKESRAEFGDVYSASIFSNAKTTTGSGVQT 61

Query: 64  KKIGV--DQSTFVEEFDPGHPVANASGIVKYPNVNVLVE 100
             +     + + +   +P     + +G     N  +  +
Sbjct: 62  SIVAQQFHEGSSIYTNNPLDLRISGNGYFSVANDKLATQ 100


>gi|89092136|ref|ZP_01165091.1| flagellar hook protein (FlgE)-like [Oceanospirillum sp. MED92]
 gi|89083871|gb|EAR63088.1| flagellar hook protein (FlgE)-like [Oceanospirillum sp. MED92]
          Length = 634

 Score = 49.5 bits (116), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/98 (17%), Positives = 31/98 (31%)

Query: 34  TTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
           + G           T   +  +  SG              V     G      S  ++  
Sbjct: 537 SNGQNQDLGVVAIATFENQSGLQPSGDTEWTATLTSGDAIVNPPGTGLNGTLRSAALEQS 596

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           NV++  E   + E  R + AN +TI+  + +    L +
Sbjct: 597 NVDLSAELVALIEAQRNFQANSKTIETQNTVTQAILQI 634



 Score = 38.3 bits (87), Expect = 0.33,   Method: Composition-based stats.
 Identities = 20/69 (28%), Positives = 27/69 (39%), Gaps = 4/69 (5%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTG----DTPGSDPYRRKTISFEEVMHGSGG 60
          +A  + A +GL   S  + +I  NIAN+ T G     T   D Y    +          G
Sbjct: 1  MAGFNTAVTGLKAASTDLDVIGNNIANSSTVGFKTSRTEFGDIYATAVVGAGSSNVAGSG 60

Query: 61 VRVKKIGVD 69
          V V  I  D
Sbjct: 61 VTVSDIAQD 69


>gi|90422624|ref|YP_530994.1| flagellar hook protein FlgE [Rhodopseudomonas palustris BisB18]
 gi|90104638|gb|ABD86675.1| flagellar basal body FlaE [Rhodopseudomonas palustris BisB18]
          Length = 411

 Score = 49.5 bits (116), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 23/44 (52%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  NV++  E   M E+ R Y AN +  +   D++   ++L R
Sbjct: 368 LEASNVDLANELTAMIESQRGYTANSKVFQTGADLLDVLVNLKR 411



 Score = 44.1 bits (102), Expect = 0.006,   Method: Composition-based stats.
 Identities = 20/95 (21%), Positives = 30/95 (31%), Gaps = 2/95 (2%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR--RKTISFEEVMHGSG 59
            L        SG+  QS ++  +++NIAN  TTG    S  +              GS 
Sbjct: 1  MSLYGVMRTGGSGMTAQSNKLSAVADNIANVNTTGYKRASTEFSSLILKSGSGSYNSGSV 60

Query: 60 GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPN 94
            +V+    D  T              +G     N
Sbjct: 61 ETQVRYAISDPGTLQYTTSATDLAIQGNGFFAVSN 95


>gi|296274397|ref|YP_003657028.1| hypothetical protein Arnit_2873 [Arcobacter nitrofigilis DSM 7299]
 gi|296098571|gb|ADG94521.1| protein of unknown function DUF1078 domain protein [Arcobacter
           nitrofigilis DSM 7299]
          Length = 913

 Score = 49.5 bits (116), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 10/52 (19%), Positives = 20/52 (38%)

Query: 82  PVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             +  +       V+   E  ++ +    Y AN + I    +M+ T L + R
Sbjct: 862 SESMNNSYDLVTKVDNDEEMINLIKFQSAYSANAKMITTVDEMLKTLLGIKR 913



 Score = 39.5 bits (90), Expect = 0.15,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 28/68 (41%), Gaps = 7/68 (10%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ S +IA SGL      ++    NIAN  T G       Y+++ +   E     G    
Sbjct: 1  MLDSLNIAQSGLKAAQTAVENTMNNIANVNTEG-------YKKRVVETSETDQLPGSKLG 53

Query: 64 KKIGVDQS 71
          + + V  +
Sbjct: 54 RGVTVGNT 61


>gi|331662482|ref|ZP_08363405.1| flagellar hook protein FlgE [Escherichia coli TA143]
 gi|284920899|emb|CBG33962.1| flagellar hook protein FlgE [Escherichia coli 042]
 gi|331060904|gb|EGI32868.1| flagellar hook protein FlgE [Escherichia coli TA143]
          Length = 402

 Score = 49.5 bits (116), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 26/51 (50%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +     +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 351 NFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401



 Score = 34.8 bits (78), Expect = 4.2,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 4/63 (6%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          +   A SGL   +  + +I  NIAN+ T G   G+  +               GV+V  I
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFA----DMFAGSKVGLGVKVAGI 57

Query: 67 GVD 69
            D
Sbjct: 58 TQD 60


>gi|91224199|ref|ZP_01259462.1| flagellar hook protein E [Vibrio alginolyticus 12G01]
 gi|269965644|ref|ZP_06179757.1| Flagellar hook protein flgE [Vibrio alginolyticus 40B]
 gi|91191110|gb|EAS77376.1| flagellar hook protein E [Vibrio alginolyticus 12G01]
 gi|269829712|gb|EEZ83948.1| Flagellar hook protein flgE [Vibrio alginolyticus 40B]
          Length = 398

 Score = 49.5 bits (116), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/105 (16%), Positives = 31/105 (29%), Gaps = 5/105 (4%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQS-----TFVEEFDPGHPVAN 85
           N              +  +   +  +  G  +V      QS       +     G     
Sbjct: 292 NGMVYATYTNGQSQLQGQVVLADFANTQGLAKVSGTSWTQSFSSGAPIMGVPGSGTMGDL 351

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             G ++  NV++  E   +    R Y AN +TI  S  +     +
Sbjct: 352 TPGALEGSNVDLTSELVALMTAQRNYQANAKTISTSDKLTQALFN 396



 Score = 40.2 bits (92), Expect = 0.093,   Method: Composition-based stats.
 Identities = 23/62 (37%), Positives = 26/62 (41%), Gaps = 5/62 (8%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          S +IA SGL   +  +  IS NIANA T G   G     R   S        GGV V  I
Sbjct: 2  SFNIALSGLDATNTELNTISHNIANASTYGFKGG-----RTEFSAVYNGMQPGGVEVASI 56

Query: 67 GV 68
            
Sbjct: 57 SQ 58


>gi|260772274|ref|ZP_05881190.1| flagellar hook protein FlgE [Vibrio metschnikovii CIP 69.14]
 gi|260611413|gb|EEX36616.1| flagellar hook protein FlgE [Vibrio metschnikovii CIP 69.14]
          Length = 356

 Score = 49.5 bits (116), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/84 (16%), Positives = 34/84 (40%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
            ++ E+ +   GG +             E   G     ++G+++  N+++  E  D+   
Sbjct: 272 RVANEQGLDKKGGTQWDSTQQSGVKIWGESSKGSFGTISNGVLEQSNIDMTQELVDLISA 331

Query: 108 NRLYMANLQTIKQSHDMMTTTLDL 131
            R + AN + ++    +  T L +
Sbjct: 332 QRNFQANSRALEVHTGLQQTILQI 355


>gi|296102908|ref|YP_003613054.1| flagellar hook protein FlgE [Enterobacter cloacae subsp. cloacae
           ATCC 13047]
 gi|295057367|gb|ADF62105.1| flagellar hook protein FlgE [Enterobacter cloacae subsp. cloacae
           ATCC 13047]
          Length = 402

 Score = 49.5 bits (116), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 26/51 (50%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +     +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 351 NFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401



 Score = 34.8 bits (78), Expect = 4.2,   Method: Composition-based stats.
 Identities = 18/63 (28%), Positives = 25/63 (39%), Gaps = 4/63 (6%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          +   A SGL   +  + +I  NIAN+ T G   GS  +               GV+V  I
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGSASFA----DMFAGSKVGLGVKVAGI 57

Query: 67 GVD 69
            D
Sbjct: 58 TQD 60


>gi|27363705|ref|NP_759233.1| flagellar hook protein FlgE [Vibrio vulnificus CMCP6]
 gi|37679147|ref|NP_933756.1| flagellar hook protein FlgE [Vibrio vulnificus YJ016]
 gi|320157109|ref|YP_004189488.1| flagellar hook protein FlgE [Vibrio vulnificus MO6-24/O]
 gi|27359821|gb|AAO08760.1| Flagellar hook protein flgE [Vibrio vulnificus CMCP6]
 gi|37197889|dbj|BAC93727.1| flagellar hook protein FlgE [Vibrio vulnificus YJ016]
 gi|319932421|gb|ADV87285.1| flagellar hook protein FlgE [Vibrio vulnificus MO6-24/O]
          Length = 434

 Score = 49.5 bits (116), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/84 (16%), Positives = 33/84 (39%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
            +  E+ +   GG +             E + G     +SG ++  N+++  E  D+   
Sbjct: 350 RVPNEQGLDKKGGTQWNSTNNSGDKIWGESNKGSFGTVSSGALEQSNIDMTQELVDLISA 409

Query: 108 NRLYMANLQTIKQSHDMMTTTLDL 131
            R + AN + ++  + +    L +
Sbjct: 410 QRNFQANSRALEVHNQLQQNILQI 433



 Score = 38.3 bits (87), Expect = 0.36,   Method: Composition-based stats.
 Identities = 11/35 (31%), Positives = 16/35 (45%)

Query: 10 IANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          ++ SGL+     +   S NIANA T G       +
Sbjct: 4  VSLSGLSAAQLDLNTTSNNIANANTYGFKESRAEF 38


>gi|161503735|ref|YP_001570847.1| flagellar hook protein FlgE [Salmonella enterica subsp. arizonae
           serovar 62:z4,z23:-- str. RSK2980]
 gi|160865082|gb|ABX21705.1| hypothetical protein SARI_01820 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 402

 Score = 49.5 bits (116), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 26/51 (50%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +     +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 351 NFGKLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401



 Score = 35.2 bits (79), Expect = 3.1,   Method: Composition-based stats.
 Identities = 18/63 (28%), Positives = 25/63 (39%), Gaps = 4/63 (6%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          S   A SGL   +  + +I  NIAN+ T G   G+  +               GV+V  I
Sbjct: 2  SFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFA----DMFAGSKVGLGVKVAGI 57

Query: 67 GVD 69
            D
Sbjct: 58 TQD 60


>gi|94312669|ref|YP_585878.1| flagellar hook protein [Cupriavidus metallidurans CH34]
 gi|93356521|gb|ABF10609.1| flagellar hook protein [Cupriavidus metallidurans CH34]
          Length = 415

 Score = 49.5 bits (116), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/42 (33%), Positives = 23/42 (54%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           V+  NV++  +  ++    R Y AN QTIK    +M T ++L
Sbjct: 374 VEESNVDLSGQLVNLIVAQRNYQANAQTIKAQDTVMQTLVNL 415


>gi|161614600|ref|YP_001588565.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Paratyphi B str. SPB7]
 gi|168237259|ref|ZP_02662317.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|168244776|ref|ZP_02669708.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|194449419|ref|YP_002045176.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|194736988|ref|YP_002114176.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|161363964|gb|ABX67732.1| hypothetical protein SPAB_02350 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194407723|gb|ACF67942.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|194712490|gb|ACF91711.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|197289882|gb|EDY29243.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|205336442|gb|EDZ23206.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
          Length = 403

 Score = 49.5 bits (116), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 26/51 (50%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +     +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 352 NFGKLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 402



 Score = 35.2 bits (79), Expect = 3.1,   Method: Composition-based stats.
 Identities = 18/63 (28%), Positives = 25/63 (39%), Gaps = 4/63 (6%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          S   A SGL   +  + +I  NIAN+ T G   G+  +               GV+V  I
Sbjct: 2  SFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFA----DMFAGSKVGLGVKVAGI 57

Query: 67 GVD 69
            D
Sbjct: 58 TQD 60


>gi|116252321|ref|YP_768159.1| hypothetical protein RL2575 [Rhizobium leguminosarum bv. viciae
           3841]
 gi|115256969|emb|CAK08063.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 101

 Score = 49.5 bits (116), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/133 (22%), Positives = 44/133 (33%), Gaps = 32/133 (24%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             +   A  A SG+  Q+ R+  I+ NIAN+ T G       Y R   S   V  G    
Sbjct: 1   MSISGIASTALSGMRAQTTRVSAIANNIANSSTPG-------YARLNTSLTSVEPGGVQA 53

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
            V                              +++   E AD+ E  + Y AN    +  
Sbjct: 54  VVSPT-------------------------ASDIDPATELADLIEAEQSYKANAVVFETG 88

Query: 122 HDMMTTTLDLLRD 134
            DM    + + RD
Sbjct: 89  ADMWEMLMSIKRD 101


>gi|229090715|ref|ZP_04221948.1| Flagellar hook protein FlgE [Bacillus cereus Rock3-42]
 gi|228692657|gb|EEL46383.1| Flagellar hook protein FlgE [Bacillus cereus Rock3-42]
          Length = 437

 Score = 49.5 bits (116), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 12/62 (19%), Positives = 25/62 (40%)

Query: 72  TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             +                +  NV++ VE  D+    R +  N + IK S +++   ++L
Sbjct: 376 PGIGVAGENGAGNVRGSAKESSNVDLSVEFVDLMLYQRGFQGNAKVIKVSDEVLNEVVNL 435

Query: 132 LR 133
           +R
Sbjct: 436 IR 437



 Score = 40.2 bits (92), Expect = 0.092,   Method: Composition-based stats.
 Identities = 14/69 (20%), Positives = 30/69 (43%), Gaps = 6/69 (8%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I + + + +G+      + + S NIANA+T G        ++K I  + + + + G R 
Sbjct: 1  MIKALYTSITGMNAAQNALSVTSNNIANAQTVG------YKKQKAIFDDLLYNNTVGSRG 54

Query: 64 KKIGVDQST 72
                 + 
Sbjct: 55 DGAYAGTNP 63


>gi|146311246|ref|YP_001176320.1| flagellar hook protein FlgE [Enterobacter sp. 638]
 gi|145318122|gb|ABP60269.1| flagellar basal body FlaE domain protein [Enterobacter sp. 638]
          Length = 404

 Score = 49.5 bits (116), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 27/51 (52%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  +  +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 353 NFGSLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 403



 Score = 34.5 bits (77), Expect = 5.0,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 19/39 (48%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          +   A SGL   +  + +I  NIAN+ T G   G+  + 
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFA 40


>gi|21231397|ref|NP_637314.1| flagellar hook protein FlgE [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66768550|ref|YP_243312.1| flagellar hook protein FlgE [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|188991641|ref|YP_001903651.1| flagellar hook protein FlgE [Xanthomonas campestris pv. campestris
           str. B100]
 gi|21113063|gb|AAM41238.1| flagellar biosynthesis, hook protein [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66573882|gb|AAY49292.1| flagellar biosynthesis, hook protein [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|167733401|emb|CAP51602.1| unnamed protein product [Xanthomonas campestris pv. campestris]
          Length = 407

 Score = 49.5 bits (116), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/83 (15%), Positives = 28/83 (33%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
               + +   G     +     +  V   D        SG ++   V++  +  +M    
Sbjct: 324 FVNPQGLQSQGNNMWAESYTSGAARVGAPDTSDLGQIESGSLEASTVDLTEQLVNMIVAQ 383

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R + AN Q I     +  T +++
Sbjct: 384 RNFQANSQMISTQDQVTQTIINI 406



 Score = 35.6 bits (80), Expect = 2.5,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 19/39 (48%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          + + + SG+   +A + + S NIAN  TTG       + 
Sbjct: 2  AFNTSLSGINAANADLNVTSNNIANVNTTGFKESRAEFA 40


>gi|319650828|ref|ZP_08004965.1| flagellar basal-body rod protein [Bacillus sp. 2_A_57_CT2]
 gi|317397426|gb|EFV78127.1| flagellar basal-body rod protein [Bacillus sp. 2_A_57_CT2]
          Length = 279

 Score = 49.5 bits (116), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 12/98 (12%), Positives = 25/98 (25%), Gaps = 1/98 (1%)

Query: 37  DTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVN 96
              G         +         G  +  +  +                  G ++  NV+
Sbjct: 180 GEAGETARLGIMYAQNPESLRKEGDGLFAVTEESVLENAYNAQNVQFKLQQGYLERSNVD 239

Query: 97  VLVETADMRETNRLYMANLQTIKQSH-DMMTTTLDLLR 133
                 DM    R + AN + ++     M     ++ R
Sbjct: 240 ASRTMTDMMTAYRSFEANQKVLQAYDRSMEKAANEIGR 277



 Score = 44.1 bits (102), Expect = 0.006,   Method: Composition-based stats.
 Identities = 16/79 (20%), Positives = 28/79 (35%), Gaps = 3/79 (3%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +    + A SG+  Q  R ++++ N+ANA T G               E ++   G   V
Sbjct: 1  MFRGFYTAASGMLAQQRRTEVLTNNMANANTPGFKADQT---SLRAFPEMLLQRIGQKTV 57

Query: 64 KKIGVDQSTFVEEFDPGHP 82
                   F +E    + 
Sbjct: 58 PTEKGLNLPFNQEVGSLNS 76


>gi|218902868|ref|YP_002450702.1| putative flagellar hook protein FlgE [Bacillus cereus AH820]
 gi|218535884|gb|ACK88282.1| putative flagellar hook protein FlgE [Bacillus cereus AH820]
          Length = 437

 Score = 49.5 bits (116), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 12/62 (19%), Positives = 25/62 (40%)

Query: 72  TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             +                +  NV++ VE  D+    R +  N + IK S +++   ++L
Sbjct: 376 PGIGVAGENGAGNVRGSAKESSNVDLSVEFVDLMLYQRGFQGNAKVIKVSDEVLNEVVNL 435

Query: 132 LR 133
           +R
Sbjct: 436 IR 437



 Score = 40.2 bits (92), Expect = 0.093,   Method: Composition-based stats.
 Identities = 14/69 (20%), Positives = 30/69 (43%), Gaps = 6/69 (8%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I + + + +G+      + + S NIANA+T G        ++K I  + + + + G R 
Sbjct: 1  MIKALYTSITGMNAAQNALSVTSNNIANAQTVG------YKKQKAIFDDLLYNNTVGSRG 54

Query: 64 KKIGVDQST 72
                 + 
Sbjct: 55 DGAYAGTNP 63


>gi|91210228|ref|YP_540214.1| flagellar hook protein FlgE [Escherichia coli UTI89]
 gi|117623262|ref|YP_852175.1| flagellar hook protein FlgE [Escherichia coli APEC O1]
 gi|215486285|ref|YP_002328716.1| flagellar hook protein FlgE [Escherichia coli O127:H6 str.
           E2348/69]
 gi|218557958|ref|YP_002390871.1| flagellar hook protein FlgE [Escherichia coli S88]
 gi|237706938|ref|ZP_04537419.1| flagellar hook protein FlgE [Escherichia sp. 3_2_53FAA]
 gi|312968850|ref|ZP_07783057.1| flagellar hook protein flgE [Escherichia coli 2362-75]
 gi|91071802|gb|ABE06683.1| flagellar biosynthesis, hook protein [Escherichia coli UTI89]
 gi|115512386|gb|ABJ00461.1| flagellar biosynthesis, hook protein FlgE [Escherichia coli APEC
           O1]
 gi|215264357|emb|CAS08714.1| flagellar hook protein [Escherichia coli O127:H6 str. E2348/69]
 gi|218364727|emb|CAR02417.1| flagellar hook protein [Escherichia coli S88]
 gi|226898148|gb|EEH84407.1| flagellar hook protein FlgE [Escherichia sp. 3_2_53FAA]
 gi|294491293|gb|ADE90049.1| flagellar hook protein FlgE [Escherichia coli IHE3034]
 gi|307627454|gb|ADN71758.1| flagellar hook protein FlgE [Escherichia coli UM146]
 gi|312286252|gb|EFR14165.1| flagellar hook protein flgE [Escherichia coli 2362-75]
 gi|315287369|gb|EFU46780.1| flagellar hook protein FlgE [Escherichia coli MS 110-3]
 gi|323953238|gb|EGB49104.1| fagellar hook-basal body protein [Escherichia coli H252]
 gi|323957900|gb|EGB53612.1| fagellar hook-basal body protein [Escherichia coli H263]
          Length = 401

 Score = 49.5 bits (116), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 26/51 (50%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +     +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 350 NFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 400



 Score = 34.8 bits (78), Expect = 4.4,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 4/63 (6%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          +   A SGL   +  + +I  NIAN+ T G   G+  +               GV+V  I
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFA----DMFAGSKVGLGVKVAGI 57

Query: 67 GVD 69
            D
Sbjct: 58 TQD 60


>gi|52143704|ref|YP_083124.1| flagellar hook protein FlgE [Bacillus cereus E33L]
 gi|228926789|ref|ZP_04089857.1| Flagellar hook protein FlgE [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|229121305|ref|ZP_04250536.1| Flagellar hook protein FlgE [Bacillus cereus 95/8201]
 gi|51977173|gb|AAU18723.1| flagellar hook protein [Bacillus cereus E33L]
 gi|228662150|gb|EEL17759.1| Flagellar hook protein FlgE [Bacillus cereus 95/8201]
 gi|228832902|gb|EEM78471.1| Flagellar hook protein FlgE [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
          Length = 437

 Score = 49.5 bits (116), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 12/62 (19%), Positives = 25/62 (40%)

Query: 72  TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             +                +  NV++ VE  D+    R +  N + IK S +++   ++L
Sbjct: 376 PGIGVAGENGAGNVRGSAKESSNVDLSVEFVDLMLYQRGFQGNAKVIKVSDEVLNEVVNL 435

Query: 132 LR 133
           +R
Sbjct: 436 IR 437



 Score = 40.2 bits (92), Expect = 0.092,   Method: Composition-based stats.
 Identities = 14/69 (20%), Positives = 30/69 (43%), Gaps = 6/69 (8%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I + + + +G+      + + S NIANA+T G        ++K I  + + + + G R 
Sbjct: 1  MIKALYTSITGMNAAQNALSVTSNNIANAQTVG------YKKQKAIFDDLLYNNTVGSRG 54

Query: 64 KKIGVDQST 72
                 + 
Sbjct: 55 DGAYAGTNP 63


>gi|322380410|ref|ZP_08054616.1| flagellar hook protein FlgE [Helicobacter suis HS5]
 gi|321147200|gb|EFX41894.1| flagellar hook protein FlgE [Helicobacter suis HS5]
          Length = 601

 Score = 49.5 bits (116), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 8/45 (17%), Positives = 18/45 (40%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NVN      ++    R Y  N +      D++   ++L +
Sbjct: 557 YLETSNVNAGRSLTNLILMQRGYSMNAKAFTTGDDLIKEAINLKK 601


>gi|119469950|ref|ZP_01612755.1| flagellar hook protein E [Alteromonadales bacterium TW-7]
 gi|119446660|gb|EAW27933.1| flagellar hook protein E [Alteromonadales bacterium TW-7]
          Length = 454

 Score = 49.5 bits (116), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/84 (19%), Positives = 30/84 (35%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
             S  + +   G    KK          E   G   +  S  ++  NVN+  E  D+   
Sbjct: 370 RFSNSQGLQQVGDTAWKKSLTSGEPIAGEPGSGTLGSINSSALEQSNVNLTNELVDLISA 429

Query: 108 NRLYMANLQTIKQSHDMMTTTLDL 131
            R + AN + ++ +  +    L +
Sbjct: 430 QRNFQANSRALEVNSTLQQAILQI 453



 Score = 39.1 bits (89), Expect = 0.22,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 19/39 (48%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          S +IA +G+A     + + + NIAN  TTG       + 
Sbjct: 2  SFNIALTGIAAAQKDLDVTANNIANVNTTGFKESRAEFA 40


>gi|254251191|ref|ZP_04944509.1| flagellar hook protein FlgE [Burkholderia dolosa AUO158]
 gi|124893800|gb|EAY67680.1| flagellar hook protein FlgE [Burkholderia dolosa AUO158]
          Length = 413

 Score = 49.5 bits (116), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/83 (16%), Positives = 30/83 (36%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +    +   GG +  +        +      +        ++  NV++  +  ++    
Sbjct: 331 FNNPNGLVAIGGNQFVETAASGVPQISAPGSTNHGTLQGSALENSNVDLTSQLVNLITAQ 390

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y AN QTIK    +  T ++L
Sbjct: 391 RNYQANAQTIKTQQTVDQTLINL 413


>gi|294140184|ref|YP_003556162.1| flagellar hook protein FlgE [Shewanella violacea DSS12]
 gi|293326653|dbj|BAJ01384.1| flagellar hook protein FlgE [Shewanella violacea DSS12]
          Length = 454

 Score = 49.5 bits (116), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 19/113 (16%), Positives = 45/113 (39%), Gaps = 1/113 (0%)

Query: 20  ARMQIISENIANAR-TTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFD 78
             +++ ++ + NA  + G T           + E+ +   G    +           E +
Sbjct: 341 TNVEVGADGLINASYSNGSTVALARVALARFANEQGLTQVGNTSWRASLDSGLALAGEAN 400

Query: 79  PGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G   +  S  ++  NV++  E  D+    R + AN +T++ ++ +  T L +
Sbjct: 401 SGTFGSIRSSALEQSNVDLTTELVDLISAQRNFQANSRTLEVNNTLQQTILQI 453



 Score = 39.5 bits (90), Expect = 0.17,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 17/39 (43%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          S +IA SG+A     +   + NIAN  + G       + 
Sbjct: 2  SFNIALSGIAAAQKDLNTTANNIANVNSIGFKESRAEFA 40


>gi|289577406|ref|YP_003476033.1| flagellar basal-body rod protein FlgF [Thermoanaerobacter italicus
           Ab9]
 gi|289527119|gb|ADD01471.1| flagellar basal-body rod protein FlgF [Thermoanaerobacter italicus
           Ab9]
          Length = 251

 Score = 49.5 bits (116), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 20/45 (44%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             G ++  NVN + E  +M    R Y +N + +    + +   ++
Sbjct: 202 KQGFLEQSNVNSVKEMVNMISVMRNYESNQKVVIAFDETLGKAVN 246



 Score = 35.6 bits (80), Expect = 2.2,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 24/67 (35%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++   + A+SG+  Q   M +++ N+AN  TTG                    G      
Sbjct: 1  MLRGLYAASSGMVTQIKIMDVLTNNLANVNTTGYKRDIVITSSFPNFEVTRYGGDNIPPD 60

Query: 64 KKIGVDQ 70
           KIG   
Sbjct: 61 GKIGKMD 67


>gi|30261751|ref|NP_844128.1| flagellar hook protein FlgE [Bacillus anthracis str. Ames]
 gi|47526975|ref|YP_018324.1| flagellar hook protein FlgE [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|49184583|ref|YP_027835.1| flagellar hook protein FlgE [Bacillus anthracis str. Sterne]
 gi|65319023|ref|ZP_00391982.1| COG1749: Flagellar hook protein FlgE [Bacillus anthracis str.
           A2012]
 gi|165869249|ref|ZP_02213908.1| putative flagellar hook protein FlgE [Bacillus anthracis str.
           A0488]
 gi|167633465|ref|ZP_02391790.1| putative flagellar hook protein FlgE [Bacillus anthracis str.
           A0442]
 gi|167639152|ref|ZP_02397425.1| putative flagellar hook protein FlgE [Bacillus anthracis str.
           A0193]
 gi|170686150|ref|ZP_02877372.1| putative flagellar hook protein FlgE [Bacillus anthracis str.
           A0465]
 gi|170706520|ref|ZP_02896980.1| putative flagellar hook protein FlgE [Bacillus anthracis str.
           A0389]
 gi|177650602|ref|ZP_02933569.1| putative flagellar hook protein FlgE [Bacillus anthracis str.
           A0174]
 gi|190566422|ref|ZP_03019340.1| putative flagellar hook protein FlgE [Bacillus anthracis
           Tsiankovskii-I]
 gi|227815486|ref|YP_002815495.1| putative flagellar hook protein FlgE [Bacillus anthracis str. CDC
           684]
 gi|229600977|ref|YP_002866149.1| putative flagellar hook protein FlgE [Bacillus anthracis str.
           A0248]
 gi|254683244|ref|ZP_05147105.1| flagellar hook protein FlgE [Bacillus anthracis str. CNEVA-9066]
 gi|254723830|ref|ZP_05185616.1| flagellar hook protein FlgE [Bacillus anthracis str. A1055]
 gi|254734597|ref|ZP_05192309.1| flagellar hook protein FlgE [Bacillus anthracis str. Western North
           America USA6153]
 gi|254741006|ref|ZP_05198694.1| flagellar hook protein FlgE [Bacillus anthracis str. Kruger B]
 gi|254755249|ref|ZP_05207283.1| flagellar hook protein FlgE [Bacillus anthracis str. Vollum]
 gi|254759785|ref|ZP_05211809.1| flagellar hook protein FlgE [Bacillus anthracis str. Australia 94]
 gi|30255979|gb|AAP25614.1| putative flagellar hook protein FlgE [Bacillus anthracis str. Ames]
 gi|47502123|gb|AAT30799.1| putative flagellar hook protein FlgE [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|49178510|gb|AAT53886.1| flagellar hook protein FlgE, putative [Bacillus anthracis str.
           Sterne]
 gi|164714689|gb|EDR20207.1| putative flagellar hook protein FlgE [Bacillus anthracis str.
           A0488]
 gi|167512942|gb|EDR88315.1| putative flagellar hook protein FlgE [Bacillus anthracis str.
           A0193]
 gi|167531503|gb|EDR94181.1| putative flagellar hook protein FlgE [Bacillus anthracis str.
           A0442]
 gi|170128618|gb|EDS97485.1| putative flagellar hook protein FlgE [Bacillus anthracis str.
           A0389]
 gi|170669847|gb|EDT20588.1| putative flagellar hook protein FlgE [Bacillus anthracis str.
           A0465]
 gi|172083746|gb|EDT68806.1| putative flagellar hook protein FlgE [Bacillus anthracis str.
           A0174]
 gi|190562557|gb|EDV16524.1| putative flagellar hook protein FlgE [Bacillus anthracis
           Tsiankovskii-I]
 gi|227006608|gb|ACP16351.1| putative flagellar hook protein FlgE [Bacillus anthracis str. CDC
           684]
 gi|229265385|gb|ACQ47022.1| putative flagellar hook protein FlgE [Bacillus anthracis str.
           A0248]
          Length = 437

 Score = 49.5 bits (116), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 12/62 (19%), Positives = 25/62 (40%)

Query: 72  TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             +                +  NV++ VE  D+    R +  N + IK S +++   ++L
Sbjct: 376 PGIGVAGENGAGNVRGSAKESSNVDLSVEFVDLMLYQRGFQGNAKVIKVSDEVLNEVVNL 435

Query: 132 LR 133
           +R
Sbjct: 436 IR 437



 Score = 40.2 bits (92), Expect = 0.093,   Method: Composition-based stats.
 Identities = 14/69 (20%), Positives = 30/69 (43%), Gaps = 6/69 (8%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I + + + +G+      + + S NIANA+T G        ++K I  + + + + G R 
Sbjct: 1  MIKALYTSITGMNAAQNALSVTSNNIANAQTVG------YKKQKAIFDDLLYNNTVGSRG 54

Query: 64 KKIGVDQST 72
                 + 
Sbjct: 55 DGAYAGTNP 63


>gi|302390534|ref|YP_003826355.1| flagellar basal-body rod protein FlgF [Thermosediminibacter oceani
           DSM 16646]
 gi|302201162|gb|ADL08732.1| flagellar basal-body rod protein FlgF [Thermosediminibacter oceani
           DSM 16646]
          Length = 260

 Score = 49.5 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/130 (16%), Positives = 46/130 (35%), Gaps = 6/130 (4%)

Query: 6   ASAHIANSGLAVQSARMQIISEN----IAN-ARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
            S  I   G  V      ++ EN    + N ++   +T G        +    +     G
Sbjct: 127 GSFTINADGFLVTREGYYVMGENGPINLRNGSKVEINTEGEVYLDGLMVDRLRIAAFPAG 186

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           + ++K G +         P +        ++  NVN + E  ++    R Y AN + ++ 
Sbjct: 187 LSLEKQGDNLYRAQGVPLPANARIIQGA-LERANVNAVSEMVNLISAFRAYEANQRMVRA 245

Query: 121 SHDMMTTTLD 130
             D +   ++
Sbjct: 246 HDDTLAGAVN 255



 Score = 44.5 bits (103), Expect = 0.006,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 24/65 (36%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I   + + SG+  + AR  +IS N+AN  TTG       +R               V  
Sbjct: 1  MIRGLYTSASGMLAEMARTDVISNNLANINTTGFKKDRAVFRAFPEMNIHRYDDPQPVGA 60

Query: 64 KKIGV 68
            +  
Sbjct: 61 GFVID 65


>gi|295697723|ref|YP_003590961.1| fagellar hook-basal body protein [Bacillus tusciae DSM 2912]
 gi|295413325|gb|ADG07817.1| fagellar hook-basal body protein [Bacillus tusciae DSM 2912]
          Length = 265

 Score = 49.5 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/99 (16%), Positives = 30/99 (30%)

Query: 33  RTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKY 92
              G         R      + +  +G            T  +  DP        G ++ 
Sbjct: 165 SVAGTPTDIAVLGRVVFDHPQRLIKAGNNLYDAGTEVPLTPADIADPLRFGRLRQGYLEA 224

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            NV +      + E  RLY  + + +  +  MM+   +L
Sbjct: 225 SNVELTDVMTKLMEAERLYALSARAVLTADQMMSMANNL 263


>gi|293409442|ref|ZP_06653018.1| flgE [Escherichia coli B354]
 gi|291469910|gb|EFF12394.1| flgE [Escherichia coli B354]
          Length = 401

 Score = 49.5 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 26/51 (50%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +     +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 350 NFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 400



 Score = 34.8 bits (78), Expect = 4.4,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 4/63 (6%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          +   A SGL   +  + +I  NIAN+ T G   G+  +               GV+V  I
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFA----DMFAGSKVGLGVKVAGI 57

Query: 67 GVD 69
            D
Sbjct: 58 TQD 60


>gi|283833630|ref|ZP_06353371.1| flagellar hook protein FlgE [Citrobacter youngae ATCC 29220]
 gi|291071313|gb|EFE09422.1| flagellar hook protein FlgE [Citrobacter youngae ATCC 29220]
          Length = 411

 Score = 49.5 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 26/51 (50%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +     +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 360 NFGKLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 410



 Score = 34.8 bits (78), Expect = 3.6,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 4/63 (6%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          +   A SGL   +  + +I  NIAN+ T G   G+  +               GV+V  I
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGAASFA----DMFAGSKVGLGVKVAGI 57

Query: 67 GVD 69
            D
Sbjct: 58 TQD 60


>gi|254421122|ref|ZP_05034846.1| flagellar basal-body rod protein FlgG [Brevundimonas sp. BAL3]
 gi|196187299|gb|EDX82275.1| flagellar basal-body rod protein FlgG [Brevundimonas sp. BAL3]
          Length = 262

 Score = 49.5 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 21/46 (45%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
            G  +  NV+ + E + +    R Y  N + I  + +M++ T  + 
Sbjct: 216 QGYTEASNVDSVAEISALIIAQRAYEMNSKVISTADNMLSVTAQVK 261



 Score = 41.4 bits (95), Expect = 0.038,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 25/62 (40%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          + +   A SG+A Q   +++IS NIAN  T G       ++       E M      +  
Sbjct: 1  MQALRTAASGMAAQQLNVEVISNNIANMNTVGFKKQRAEFQDLLYQNVERMGAQSSSQGT 60

Query: 65 KI 66
           +
Sbjct: 61 VV 62


>gi|322378866|ref|ZP_08053283.1| flagellar hook protein FlgE [Helicobacter suis HS1]
 gi|321148676|gb|EFX43159.1| flagellar hook protein FlgE [Helicobacter suis HS1]
          Length = 601

 Score = 49.5 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 8/45 (17%), Positives = 18/45 (40%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NVN      ++    R Y  N +      D++   ++L +
Sbjct: 557 YLETSNVNAGRSLTNLILMQRGYSMNAKAFTTGDDLIKEAINLKK 601


>gi|331652129|ref|ZP_08353148.1| flagellar hook protein FlgE [Escherichia coli M718]
 gi|331050407|gb|EGI22465.1| flagellar hook protein FlgE [Escherichia coli M718]
          Length = 402

 Score = 49.5 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 26/51 (50%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +     +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 351 NFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401



 Score = 34.8 bits (78), Expect = 4.4,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 4/63 (6%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          +   A SGL   +  + +I  NIAN+ T G   G+  +               GV+V  I
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFA----DMFAGSKVGLGVKVAGI 57

Query: 67 GVD 69
            D
Sbjct: 58 TQD 60


>gi|297380296|gb|ADI35183.1| flagellar hook-associated protein FlgK [Helicobacter pylori v225d]
          Length = 606

 Score = 49.5 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/119 (17%), Positives = 35/119 (29%), Gaps = 4/119 (3%)

Query: 19  SARMQIISEN--IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEE 76
              +  I+ N  +AN          D Y  K       +         KI  D       
Sbjct: 488 RPWLAPINGNFDVANMMQQLQYDSVDFYNDKFDIKPMKISEFYQFLTGKINTDAEKSGRI 547

Query: 77  FDPGHPV--ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            D    +        +    V+V  E  ++ +    Y AN + I     M+ T L + +
Sbjct: 548 LDTKKSMLETIKKEQLSISQVSVDEEMVNLIKFQSGYAANAKVISAIDRMIDTLLGIKQ 606



 Score = 44.5 bits (103), Expect = 0.005,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 41/111 (36%), Gaps = 9/111 (8%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M  +++S + + +GL    + + +   NI+NA         + Y R+ +  +       G
Sbjct: 1   MGGILSSLNASYTGLQAHQSMVDVTGNNISNASD-------EFYSRQRVIAKPQEAYMYG 53

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
            +   +GVD +      D            +  N     E + ++E +  +
Sbjct: 54  TKNVSMGVDVTAIERVHDEFVFSRYTKANYE--NTYYDTEFSHLKEASAYF 102


>gi|229189850|ref|ZP_04316861.1| Flagellar hook protein FlgE [Bacillus cereus ATCC 10876]
 gi|228593658|gb|EEK51466.1| Flagellar hook protein FlgE [Bacillus cereus ATCC 10876]
          Length = 437

 Score = 49.5 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 11/62 (17%), Positives = 24/62 (38%)

Query: 72  TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             +                +  NV++  E  D+    R +  N + IK S +++   ++L
Sbjct: 376 PGIGVAGENGAGNVRGSAKESSNVDLSAEFVDLMLYQRGFQGNAKVIKVSDEVLNEVVNL 435

Query: 132 LR 133
           +R
Sbjct: 436 IR 437



 Score = 40.2 bits (92), Expect = 0.093,   Method: Composition-based stats.
 Identities = 14/69 (20%), Positives = 30/69 (43%), Gaps = 6/69 (8%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I + + + +G+      + + S NIANA+T G        ++K I  + + + + G R 
Sbjct: 1  MIKALYTSITGMNAAQNALSVTSNNIANAQTVG------YKKQKAIFDDLLYNNTVGSRG 54

Query: 64 KKIGVDQST 72
                 + 
Sbjct: 55 DGAYAGTNP 63


>gi|188527901|ref|YP_001910588.1| flagellar hook-associated protein FlgK [Helicobacter pylori Shi470]
 gi|188144141|gb|ACD48558.1| flagellar hook-associated protein FlgK [Helicobacter pylori Shi470]
 gi|308062395|gb|ADO04283.1| flagellar hook-associated protein FlgK [Helicobacter pylori Cuz20]
          Length = 606

 Score = 49.5 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/119 (17%), Positives = 35/119 (29%), Gaps = 4/119 (3%)

Query: 19  SARMQIISEN--IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEE 76
              +  I+ N  +AN          D Y  K       +         KI  D       
Sbjct: 488 RPWLAPINGNFDVANMMQQLQYDSVDFYNDKFDIKPMKISEFYQFLTGKINTDAEKSGRI 547

Query: 77  FDPGHPV--ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            D    +        +    V+V  E  ++ +    Y AN + I     M+ T L + +
Sbjct: 548 LDTKKSMLETIKKEQLSISQVSVDEEMVNLIKFQSGYAANAKVISAIDRMIDTLLGIKQ 606



 Score = 44.1 bits (102), Expect = 0.006,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 41/111 (36%), Gaps = 9/111 (8%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M  +++S + + +GL    + + +   NI+NA         + Y R+ +  +       G
Sbjct: 1   MGGILSSLNASYTGLQAHQSMVDVTGNNISNASD-------EFYSRQRVIAKPQEAYMYG 53

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
            +   +GVD +      D            +  N     E + ++E +  +
Sbjct: 54  TKNVNMGVDVTAIERVHDEFVFSRYTKANYE--NTYYDTEFSHLKEASAYF 102


>gi|118444348|ref|YP_877945.1| flagellar hook-associated protein 1 [Clostridium novyi NT]
 gi|118134804|gb|ABK61848.1| flagellar hook-associated protein 1 [Clostridium novyi NT]
          Length = 676

 Score = 49.5 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 27/78 (34%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  L ++ ++   GL  Q   + + S NIAN+ T G T                M    G
Sbjct: 1  MSGLFSTLNVGKRGLYAQQGALDVTSHNIANSNTKGYTRQRALMETTRPFGMPSMDNQVG 60

Query: 61 VRVKKIGVDQSTFVEEFD 78
                GV+ S      D
Sbjct: 61 PGQIGTGVEISKIQRVRD 78



 Score = 43.7 bits (101), Expect = 0.008,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 20/42 (47%), Gaps = 1/42 (2%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD-LLR 133
             V++  E A++ +    Y AN + I  +  ++   ++ L R
Sbjct: 635 SGVSLNEEMANIVQYQHAYQANAKIIATTDQLLDVVINGLKR 676


>gi|157160603|ref|YP_001457921.1| flagellar hook protein FlgE [Escherichia coli HS]
 gi|170020528|ref|YP_001725482.1| flagellar hook protein FlgE [Escherichia coli ATCC 8739]
 gi|312971213|ref|ZP_07785391.1| flagellar hook protein flgE [Escherichia coli 1827-70]
 gi|157066283|gb|ABV05538.1| flagellar hook protein FlgE [Escherichia coli HS]
 gi|169755456|gb|ACA78155.1| flagellar basal body FlaE domain protein [Escherichia coli ATCC
           8739]
 gi|310336415|gb|EFQ01601.1| flagellar hook protein flgE [Escherichia coli 1827-70]
          Length = 402

 Score = 49.5 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 26/51 (50%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +     +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 351 NFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401



 Score = 34.8 bits (78), Expect = 4.4,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 4/63 (6%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          +   A SGL   +  + +I  NIAN+ T G   G+  +               GV+V  I
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFA----DMFAGSKVGLGVKVAGI 57

Query: 67 GVD 69
            D
Sbjct: 58 TQD 60


>gi|332092901|gb|EGI97969.1| flagellar basal-body rod protein flgC [Shigella dysenteriae
          155-74]
          Length = 49

 Score = 49.5 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 22/49 (44%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS 50
            L+    IA S L  QS R+ + + N+ANA +     G     ++ + 
Sbjct: 1  MALLNIFDIAGSALTAQSQRLNVAASNLANADSVTGPDGQPYRAKQVVF 49


>gi|308063903|gb|ADO05790.1| flagellar hook-associated protein FlgK [Helicobacter pylori Sat464]
          Length = 606

 Score = 49.5 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/119 (17%), Positives = 35/119 (29%), Gaps = 4/119 (3%)

Query: 19  SARMQIISEN--IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEE 76
              +  I+ N  +AN          D Y  K       +         KI  D       
Sbjct: 488 RPWLAPINGNFDVANMMQQLQYDSVDFYNDKFDIKPMKISEFYQFLTGKINTDAEKSGRI 547

Query: 77  FDPGHPV--ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            D    +        +    V+V  E  ++ +    Y AN + I     M+ T L + +
Sbjct: 548 LDTKKSMLETIKKEQLSISQVSVDEEMVNLIKFQSGYAANAKVISAIDRMIDTLLGIKQ 606



 Score = 44.1 bits (102), Expect = 0.006,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 41/111 (36%), Gaps = 9/111 (8%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M  +++S + + +GL    + + +   NI+NA         + Y R+ +  +       G
Sbjct: 1   MGGILSSLNASYTGLQAHQSMVDVTGNNISNASD-------EFYSRQRVIAKPQEAYMYG 53

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
            +   +GVD +      D            +  N     E + ++E +  +
Sbjct: 54  TKNVNMGVDVTAIERVHDEFVFSRYTKANYE--NTYYDTEFSHLKEASAYF 102


>gi|78047586|ref|YP_363761.1| flagellar hook protein FlgE [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|78036016|emb|CAJ23707.1| flagellar hook protein FlgE [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
          Length = 407

 Score = 49.5 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 12/83 (14%), Positives = 27/83 (32%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
               + +   G     +     +      D        SG ++   V++  +  +M    
Sbjct: 324 FVNPQGLQSQGNNMWAESYTSGAARTGAPDTSDLGQIESGSLEASTVDLTEQLVNMIVAQ 383

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R + AN Q I     +  T +++
Sbjct: 384 RNFQANSQMISTQDQVTQTIINI 406



 Score = 34.8 bits (78), Expect = 3.7,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 18/39 (46%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
            + + SG+   +A + + S NIAN  TTG       + 
Sbjct: 2  GFNTSLSGINAANADLNVTSNNIANVNTTGFKESRAEFA 40


>gi|134300226|ref|YP_001113722.1| hypothetical protein Dred_2387 [Desulfotomaculum reducens MI-1]
 gi|134052926|gb|ABO50897.1| protein of unknown function DUF1078 domain protein
           [Desulfotomaculum reducens MI-1]
          Length = 257

 Score = 49.5 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 7/59 (11%), Positives = 24/59 (40%)

Query: 72  TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
                 +         G ++  NV+ + E  ++    R+Y ++ + I+   +++   ++
Sbjct: 193 DPEGVAEAAVSTTVTQGWLEKSNVDPVQEMINIIPVARIYESSQKLIQIQDELLDKAIN 251


>gi|320173529|gb|EFW48725.1| Flagellar hook protein FlgE [Shigella dysenteriae CDC 74-1112]
          Length = 402

 Score = 49.5 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 26/51 (50%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +     +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 351 NFATLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401



 Score = 34.5 bits (77), Expect = 4.6,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 4/63 (6%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          +   A SGL   +  + +I  NIAN+ T G   G+  +               GV+V  I
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFA----DMFAGSKVGLGVKVAGI 57

Query: 67 GVD 69
            D
Sbjct: 58 TQD 60


>gi|297543693|ref|YP_003675995.1| flagellar basal-body rod protein FlgF [Thermoanaerobacter mathranii
           subsp. mathranii str. A3]
 gi|296841468|gb|ADH59984.1| flagellar basal-body rod protein FlgF [Thermoanaerobacter mathranii
           subsp. mathranii str. A3]
          Length = 251

 Score = 49.5 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 20/45 (44%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             G ++  NVN + E  +M    R Y +N + +    + +   ++
Sbjct: 202 KQGFLEQSNVNSVKEMVNMISVMRNYESNQKVVIAFDETLGKAVN 246



 Score = 36.4 bits (82), Expect = 1.5,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 25/67 (37%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++   + A+SG+  Q+  M +++ N+AN  TTG                    G      
Sbjct: 1  MLRGLYAASSGMVTQTKIMDVLTNNLANVNTTGYKRDIVITSSFPNFEVTRYGGDNVPPD 60

Query: 64 KKIGVDQ 70
           KIG   
Sbjct: 61 GKIGKMD 67


>gi|254511352|ref|ZP_05123419.1| flagellar hook protein FlgE [Rhodobacteraceae bacterium KLH11]
 gi|221535063|gb|EEE38051.1| flagellar hook protein FlgE [Rhodobacteraceae bacterium KLH11]
          Length = 439

 Score = 49.5 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 21/43 (48%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +    +V  E   M +T R Y ++ + I+   +M+  T ++ R
Sbjct: 397 EESTTDVATELTSMIQTQRAYSSSAKVIQTVDEMLQETTNIKR 439



 Score = 36.8 bits (83), Expect = 1.1,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 28/64 (43%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            + +S +   + L   + R+  IS+NIAN+ T G       +     S +   + +GGV
Sbjct: 9  MTISSSLNAGVAALKANANRLATISDNIANSSTFGYKRVETDFHSMVTSGQGGSYSAGGV 68

Query: 62 RVKK 65
          R   
Sbjct: 69 RTTS 72


>gi|56421867|ref|YP_149185.1| flagellar basal-body rod protein [Geobacillus kaustophilus HTA426]
 gi|56381709|dbj|BAD77617.1| flagellar basal-body rod protein [Geobacillus kaustophilus HTA426]
          Length = 276

 Score = 49.5 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/116 (11%), Positives = 34/116 (29%), Gaps = 1/116 (0%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFV 74
           L     R+ + SE  A  R  G     +    +          +       +    +  +
Sbjct: 156 LDANGERIPLSSERFA-VRDDGTIIDENGTATRLGVAFAANPQTLVKEGNGLFRSTTGPL 214

Query: 75  EEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            +             ++  NV++     D+    R + AN + ++     +   ++
Sbjct: 215 PQAPGNVTYTVKQRFLERSNVDIERTMTDLLAAYRAFEANQKIVQAYDRSLDKAVN 270



 Score = 40.2 bits (92), Expect = 0.090,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 22/55 (40%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++   + A SG+  Q  R+  ++ N+ANA T G    +   R         +   
Sbjct: 1  MLRGLYTAASGMLAQERRVDWLTNNLANAETPGYKADAAAMRAFPELLMSRLEDQ 55


>gi|294140185|ref|YP_003556163.1| flagellar hook protein FlgE [Shewanella violacea DSS12]
 gi|293326654|dbj|BAJ01385.1| flagellar hook protein FlgE [Shewanella violacea DSS12]
          Length = 453

 Score = 49.5 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/113 (17%), Positives = 45/113 (39%), Gaps = 1/113 (0%)

Query: 20  ARMQIISENIANAR-TTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFD 78
             +++ ++ + NA  + G T           + E+ +   G    K           E +
Sbjct: 340 TNVEVGADGLINASYSNGTTVALARVALARFANEQGLTQVGNTSWKASQDSGLALAGEAN 399

Query: 79  PGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G   +  S  ++  NV++  E  D+    R + AN +T++ ++ +  T L +
Sbjct: 400 TGTFGSIRSSALEQSNVDLTTELVDLISAQRNFQANSRTLEVNNTLQQTILQI 452



 Score = 38.3 bits (87), Expect = 0.34,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 17/38 (44%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          S +IA SG+A     +   + NIAN  + G       +
Sbjct: 2  SFNIALSGIAAAQKDLNTTANNIANVNSIGFKESRAEF 39


>gi|119947177|ref|YP_944857.1| flagellar hook protein FlgE [Psychromonas ingrahamii 37]
 gi|119865781|gb|ABM05258.1| flagellar hook protein FlgE [Psychromonas ingrahamii 37]
          Length = 398

 Score = 49.5 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 12/82 (14%), Positives = 25/82 (30%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +  S      +     +        G      S +++  NV++  E   +    
Sbjct: 315 FPNPTALEQSNNTSWMQTFGSGTPVKGAPGSGVLGKLTSNMLETSNVDLTSELVSLMTAQ 374

Query: 109 RLYMANLQTIKQSHDMMTTTLD 130
           R Y AN +TI  +  +     +
Sbjct: 375 RNYQANTKTISTADQLTKALFN 396



 Score = 40.2 bits (92), Expect = 0.098,   Method: Composition-based stats.
 Identities = 14/39 (35%), Positives = 19/39 (48%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          S +IA SGL   + ++  IS NIAN  T G       + 
Sbjct: 2  SFNIAISGLNATNKQLNTISNNIANVSTYGFKESRAEFA 40


>gi|115523193|ref|YP_780104.1| flagellar hook protein FlgE [Rhodopseudomonas palustris BisA53]
 gi|115517140|gb|ABJ05124.1| flagellar basal body FlaE domain protein [Rhodopseudomonas
           palustris BisA53]
          Length = 411

 Score = 49.5 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 23/44 (52%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  NV++  E   M E+ R Y AN +  +   D++   ++L R
Sbjct: 368 LEQSNVDLASELTAMIESQRGYTANSKVFQTGADLLDVLVNLKR 411



 Score = 44.1 bits (102), Expect = 0.007,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 20/43 (46%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
            L        SG+  QS ++  +++NIAN  TTG    S  +
Sbjct: 1  MSLYGVMRTGGSGMNAQSNKLSTVADNIANVNTTGYKRASTEF 43


>gi|301168505|emb|CBW28095.1| flagellar basal-body rod protein [Bacteriovorax marinus SJ]
          Length = 261

 Score = 49.5 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 10/51 (19%), Positives = 24/51 (47%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +    A G ++  NV+++ E   + +  R Y  N + +  +  M+ T  ++
Sbjct: 210 NAGTIAQGALESSNVSIMNEMTSLIKAQRAYEMNSKVMGVADQMLQTVNNI 260



 Score = 39.5 bits (90), Expect = 0.17,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 20/39 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSD 42
          ++ + + A +G+A Q   +  IS NIAN  TTG      
Sbjct: 1  MLRALNTAATGMAAQEMNVSTISNNIANVNTTGYKKQRT 39


>gi|228933037|ref|ZP_04095900.1| Flagellar hook protein FlgE [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228826638|gb|EEM72409.1| Flagellar hook protein FlgE [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
          Length = 437

 Score = 49.5 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 12/62 (19%), Positives = 25/62 (40%)

Query: 72  TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             +                +  NV++ VE  D+    R +  N + IK S +++   ++L
Sbjct: 376 PGIGVAGENGAGNVRGSAKESSNVDLSVEFVDLMLYQRGFQGNAKVIKVSDEVLNEVVNL 435

Query: 132 LR 133
           +R
Sbjct: 436 IR 437



 Score = 40.2 bits (92), Expect = 0.10,   Method: Composition-based stats.
 Identities = 14/69 (20%), Positives = 30/69 (43%), Gaps = 6/69 (8%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I + + + +G+      + + S NIANA+T G        ++K I  + + + + G R 
Sbjct: 1  MIKALYTSITGMNAAQNALSVTSNNIANAQTVG------YKKQKAIFDDLLYNNTVGSRG 54

Query: 64 KKIGVDQST 72
                 + 
Sbjct: 55 DGAYAGTNP 63


>gi|289666047|ref|ZP_06487628.1| flagellar hook protein FlgE [Xanthomonas campestris pv. vasculorum
           NCPPB702]
          Length = 407

 Score = 49.5 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 11/83 (13%), Positives = 27/83 (32%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
               + +   G     +     +      +        SG ++   V++  +  +M    
Sbjct: 324 FVNPQGLQSQGNNMWAESYTSGAARTGAPNTSDLGQVESGSLEASTVDLTEQLVNMIVAQ 383

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R + AN Q I     +  T +++
Sbjct: 384 RNFQANSQMISTQDQVTQTIINI 406



 Score = 34.8 bits (78), Expect = 4.2,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 18/39 (46%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
            + + SG+   +A + + S NIAN  TTG       + 
Sbjct: 2  GFNTSLSGINAANADLNVTSNNIANVNTTGFKESRAEFA 40


>gi|206558968|ref|YP_002229728.1| flagellar hook protein FlgE [Burkholderia cenocepacia J2315]
 gi|198035005|emb|CAR50877.1| flagellar hook protein 1 FlgE1 [Burkholderia cenocepacia J2315]
          Length = 413

 Score = 49.5 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 15/83 (18%), Positives = 30/83 (36%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +    +   GG +  +        V      +        ++  NV++  +  ++    
Sbjct: 331 FNNPNGLVNLGGNQYAESAASGVPQVSAPGSTNHGTLQGSALENSNVDLTSQLVNLITAQ 390

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y AN QTIK    +  T ++L
Sbjct: 391 RNYQANAQTIKTQQTVDQTLINL 413


>gi|196044997|ref|ZP_03112230.1| putative flagellar hook protein FlgE [Bacillus cereus 03BB108]
 gi|300117326|ref|ZP_07055116.1| flagellar hook protein FlgE [Bacillus cereus SJ1]
 gi|196023999|gb|EDX62673.1| putative flagellar hook protein FlgE [Bacillus cereus 03BB108]
 gi|298725161|gb|EFI65813.1| flagellar hook protein FlgE [Bacillus cereus SJ1]
          Length = 437

 Score = 49.5 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 12/62 (19%), Positives = 25/62 (40%)

Query: 72  TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             +                +  NV++ VE  D+    R +  N + IK S +++   ++L
Sbjct: 376 PGIGVAGENGAGNVRGSAKESSNVDLSVEFVDLMLYQRGFQGNAKVIKVSDEVLNEVVNL 435

Query: 132 LR 133
           +R
Sbjct: 436 IR 437



 Score = 40.2 bits (92), Expect = 0.10,   Method: Composition-based stats.
 Identities = 14/69 (20%), Positives = 30/69 (43%), Gaps = 6/69 (8%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I + + + +G+      + + S NIANA+T G        ++K I  + + + + G R 
Sbjct: 1  MIKALYTSITGMNAAQNALSVTSNNIANAQTVG------YKKQKAIFDDLLYNNTVGSRG 54

Query: 64 KKIGVDQST 72
                 + 
Sbjct: 55 DGAYAGTNP 63


>gi|196039080|ref|ZP_03106387.1| putative flagellar hook protein FlgE [Bacillus cereus NVH0597-99]
 gi|196030225|gb|EDX68825.1| putative flagellar hook protein FlgE [Bacillus cereus NVH0597-99]
          Length = 437

 Score = 49.5 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 12/62 (19%), Positives = 25/62 (40%)

Query: 72  TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             +                +  NV++ VE  D+    R +  N + IK S +++   ++L
Sbjct: 376 PGIGVAGENGAGNVRGSAKESSNVDLSVEFVDLMLYQRGFQGNAKVIKVSDEVLNEVVNL 435

Query: 132 LR 133
           +R
Sbjct: 436 IR 437



 Score = 40.2 bits (92), Expect = 0.10,   Method: Composition-based stats.
 Identities = 14/69 (20%), Positives = 30/69 (43%), Gaps = 6/69 (8%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I + + + +G+      + + S NIANA+T G        ++K I  + + + + G R 
Sbjct: 1  MIKALYTSITGMNAAQNALSVTSNNIANAQTVG------YKKQKAIFDDLLYNNTVGSRG 54

Query: 64 KKIGVDQST 72
                 + 
Sbjct: 55 DGAYAGTNP 63


>gi|329849962|ref|ZP_08264808.1| flagellar hook protein flgE [Asticcacaulis biprosthecum C19]
 gi|328841873|gb|EGF91443.1| flagellar hook protein flgE [Asticcacaulis biprosthecum C19]
          Length = 474

 Score = 49.5 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 23/59 (38%)

Query: 75  EEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            E   G     A   ++   V++  E   +  T R Y A  + I  S +M+   L L R
Sbjct: 416 REPGEGGAGNLAPAALEASTVDLAQEFTGLITTQRAYSAASKIITTSDEMLQELLALKR 474


>gi|228945356|ref|ZP_04107711.1| Flagellar hook protein FlgE [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|228814328|gb|EEM60594.1| Flagellar hook protein FlgE [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
          Length = 437

 Score = 49.5 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 12/62 (19%), Positives = 25/62 (40%)

Query: 72  TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             +                +  NV++ VE  D+    R +  N + IK S +++   ++L
Sbjct: 376 PGIGVAGENGAGNVRGSAKESSNVDLSVEFVDLMLYQRGFQGNAKVIKVSDEVLNEVVNL 435

Query: 132 LR 133
           +R
Sbjct: 436 IR 437



 Score = 40.2 bits (92), Expect = 0.11,   Method: Composition-based stats.
 Identities = 14/69 (20%), Positives = 30/69 (43%), Gaps = 6/69 (8%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I + + + +G+      + + S NIANA+T G        ++K I  + + + + G R 
Sbjct: 1  MIKALYTSITGMNAAQNALSVTSNNIANAQTVG------YKKQKAIFDDLLYNNTVGSRG 54

Query: 64 KKIGVDQST 72
                 + 
Sbjct: 55 DGAYAGTNP 63


>gi|30019797|ref|NP_831428.1| flagellar hook protein FlgE [Bacillus cereus ATCC 14579]
 gi|229043508|ref|ZP_04191218.1| Flagellar hook protein FlgE [Bacillus cereus AH676]
 gi|229127079|ref|ZP_04256078.1| Flagellar hook protein FlgE [Bacillus cereus BDRD-Cer4]
 gi|229149956|ref|ZP_04278184.1| Flagellar hook protein FlgE [Bacillus cereus m1550]
 gi|296502353|ref|YP_003664053.1| flagellar hook protein FlgE [Bacillus thuringiensis BMB171]
 gi|29895342|gb|AAP08629.1| Flagellar hook protein flgE [Bacillus cereus ATCC 14579]
 gi|228633637|gb|EEK90238.1| Flagellar hook protein FlgE [Bacillus cereus m1550]
 gi|228656432|gb|EEL12271.1| Flagellar hook protein FlgE [Bacillus cereus BDRD-Cer4]
 gi|228725886|gb|EEL77133.1| Flagellar hook protein FlgE [Bacillus cereus AH676]
 gi|296323405|gb|ADH06333.1| flagellar hook protein FlgE [Bacillus thuringiensis BMB171]
          Length = 437

 Score = 49.5 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 12/62 (19%), Positives = 25/62 (40%)

Query: 72  TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             +                +  NV++ VE  D+    R +  N + IK S +++   ++L
Sbjct: 376 PGIGVAGENGAGNVRGSAKESSNVDLSVEFVDLMLYQRGFQGNAKVIKVSDEVLNEVVNL 435

Query: 132 LR 133
           +R
Sbjct: 436 IR 437



 Score = 40.2 bits (92), Expect = 0.11,   Method: Composition-based stats.
 Identities = 14/69 (20%), Positives = 30/69 (43%), Gaps = 6/69 (8%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I + + + +G+      + + S NIANA+T G        ++K I  + + + + G R 
Sbjct: 1  MIKALYTSITGMNAAQNALSVTSNNIANAQTVG------YKKQKAIFDDLLYNNTVGSRG 54

Query: 64 KKIGVDQST 72
                 + 
Sbjct: 55 DGAYAGTNP 63


>gi|326389273|ref|ZP_08210841.1| flagellar basal-body rod protein FlgF [Thermoanaerobacter
           ethanolicus JW 200]
 gi|325994636|gb|EGD53060.1| flagellar basal-body rod protein FlgF [Thermoanaerobacter
           ethanolicus JW 200]
          Length = 251

 Score = 49.5 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 20/45 (44%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             G ++  NVN + E  +M    R Y +N + +    + +   ++
Sbjct: 202 KQGFLEQSNVNSVKEMVNMISVMRNYESNQKVVIAFDETLGKAVN 246



 Score = 37.9 bits (86), Expect = 0.51,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 23/67 (34%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++   + A+SG+  Q+  M ++  N+AN  T G                    G      
Sbjct: 1  MLRGLYTASSGMITQTKIMDVLVNNLANVNTVGYKRDVVVTSSFPNFEVTRHGGDNTPPN 60

Query: 64 KKIGVDQ 70
           KIG   
Sbjct: 61 GKIGRMD 67


>gi|317009731|gb|ADU80311.1| flagellar hook-associated protein FlgK [Helicobacter pylori India7]
          Length = 606

 Score = 49.5 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/119 (17%), Positives = 35/119 (29%), Gaps = 4/119 (3%)

Query: 19  SARMQIISEN--IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEE 76
              +  I+ N  +AN          D Y  K       +         KI  D       
Sbjct: 488 RPWLAPINGNFDVANMMQQLQYDSVDFYNDKFDIKPMKISEFYQFLTGKINTDAEKSGRI 547

Query: 77  FDPGHPV--ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            D    +        +    V+V  E  ++ +    Y AN + I     M+ T L + +
Sbjct: 548 LDTKKSMLETIKKEQLSISQVSVDEEMVNLIKFQSGYAANAKVISAIDRMIDTLLGIKQ 606



 Score = 44.5 bits (103), Expect = 0.005,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 39/111 (35%), Gaps = 9/111 (8%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M  +++S + + +GL      + +   NI+NA         + Y R+ +  +       G
Sbjct: 1   MGGILSSLNTSYTGLQAHQNMVDVTGNNISNASD-------EFYSRQRVIAKPQAAYMYG 53

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
            +   +GVD        D            +  N     E + ++E +  +
Sbjct: 54  TKNVNMGVDVEAIERVHDEFVFARYTKANYE--NTYYDTEFSHLKEASAYF 102


>gi|138896905|ref|YP_001127358.1| flagellar basal-body rod protein [Geobacillus thermodenitrificans
           NG80-2]
 gi|134268418|gb|ABO68613.1| Flagellar basal-body rod protein [Geobacillus thermodenitrificans
           NG80-2]
          Length = 345

 Score = 49.5 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/116 (13%), Positives = 32/116 (27%), Gaps = 1/116 (0%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFV 74
           L     R+ I SE+         T  +    R  + F                       
Sbjct: 225 LDGNGERIAIPSESFTVRDDGTITAENRTIARLGVVFAANPKTVVKEGNGLFRSTDGPLP 284

Query: 75  EEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           +            G ++  NV++     D+    R + AN + I+     +   ++
Sbjct: 285 QAPG-NVTYMVKQGFIERSNVDIERTMTDLLAAYRAFEANQKIIQAYDRSLDKAVN 339



 Score = 41.8 bits (96), Expect = 0.032,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 22/56 (39%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
           ++   + A SG+  Q  R+  ++ N+ANA T G    +   R         +    
Sbjct: 70  MLRGLYTAASGMLAQQRRVDWLTNNLANAETPGYKADAGAMRAFPELLMNRLEDES 125


>gi|167038474|ref|YP_001666052.1| flagellar basal body rod protein [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|320116869|ref|YP_004187028.1| flagellar basal-body rod protein FlgF [Thermoanaerobacter brockii
           subsp. finnii Ako-1]
 gi|166857308|gb|ABY95716.1| flagellar basal body rod protein [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|319929960|gb|ADV80645.1| flagellar basal-body rod protein FlgF [Thermoanaerobacter brockii
           subsp. finnii Ako-1]
          Length = 251

 Score = 49.5 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 20/45 (44%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             G ++  NVN + E  +M    R Y +N + +    + +   ++
Sbjct: 202 KQGFLEQSNVNSVKEMVNMISVMRNYESNQKVVIAFDETLGKAVN 246



 Score = 40.2 bits (92), Expect = 0.087,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 24/67 (35%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++   + A+SG+  Q+  M +++ N+AN  T G                    G      
Sbjct: 1  MLRGLYTASSGMITQTKIMDVLANNLANVNTVGYKRDVVVTSPFPNFEVTRHGGDNTPPN 60

Query: 64 KKIGVDQ 70
           KIG   
Sbjct: 61 GKIGTMD 67


>gi|301053291|ref|YP_003791502.1| flagellar hook protein [Bacillus anthracis CI]
 gi|300375460|gb|ADK04364.1| flagellar hook protein [Bacillus cereus biovar anthracis str. CI]
          Length = 437

 Score = 49.5 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 12/62 (19%), Positives = 25/62 (40%)

Query: 72  TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             +                +  NV++ VE  D+    R +  N + IK S +++   ++L
Sbjct: 376 PGIGVAGENGAGNVRGSAKESSNVDLSVEFVDLMLYQRGFQGNAKVIKVSDEVLNEVVNL 435

Query: 132 LR 133
           +R
Sbjct: 436 IR 437



 Score = 40.2 bits (92), Expect = 0.11,   Method: Composition-based stats.
 Identities = 13/103 (12%), Positives = 36/103 (34%), Gaps = 7/103 (6%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +I + + + +G+      + + S NIANA+T G       Y+++   F+++++ +     
Sbjct: 1   MIKALYTSITGMNAAQNALSVTSNNIANAQTVG-------YKKQKAIFDDLLYNNTVGSR 53

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
                  +      +       ++            +     E
Sbjct: 54  GDGAYAGTNPKSIGNGVKFSGTSTDFSDGSITLTSDKMETAIE 96


>gi|316932790|ref|YP_004107772.1| flagellar hook-basal body protein [Rhodopseudomonas palustris DX-1]
 gi|315600504|gb|ADU43039.1| flagellar hook-basal body protein [Rhodopseudomonas palustris DX-1]
          Length = 616

 Score = 49.5 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 23/44 (52%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  N ++  E   +  T + Y AN + I  ++ M+   L+++R
Sbjct: 573 LESSNTDIADEFTKLIVTQQAYSANTKVITTANTMVQDLLNVMR 616


>gi|262166282|ref|ZP_06034019.1| flagellar hook protein FlgE [Vibrio mimicus VM223]
 gi|262025998|gb|EEY44666.1| flagellar hook protein FlgE [Vibrio mimicus VM223]
          Length = 421

 Score = 49.5 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/84 (15%), Positives = 35/84 (41%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
            ++ E+ +   GG +             E + G   + ++G ++  N+++  E  D+   
Sbjct: 337 RVANEQGLDKKGGTQWDATQFSGDKIWGESNKGSFGSISNGSLEQSNIDMTQELVDLISA 396

Query: 108 NRLYMANLQTIKQSHDMMTTTLDL 131
            R + AN + ++  + +    L +
Sbjct: 397 QRNFQANSRALEVHNGLQQNILQI 420


>gi|228958033|ref|ZP_04119769.1| Flagellar hook protein FlgE [Bacillus thuringiensis serovar
           pakistani str. T13001]
 gi|228801658|gb|EEM48539.1| Flagellar hook protein FlgE [Bacillus thuringiensis serovar
           pakistani str. T13001]
          Length = 437

 Score = 49.5 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 12/62 (19%), Positives = 25/62 (40%)

Query: 72  TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             +                +  NV++ VE  D+    R +  N + IK S +++   ++L
Sbjct: 376 PGIGVAGENGAGNVRGSAKESSNVDLSVEFVDLMLYQRGFQGNAKVIKVSDEVLNEVVNL 435

Query: 132 LR 133
           +R
Sbjct: 436 IR 437



 Score = 39.9 bits (91), Expect = 0.11,   Method: Composition-based stats.
 Identities = 14/69 (20%), Positives = 30/69 (43%), Gaps = 6/69 (8%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I + + + +G+      + + S NIANA+T G        ++K I  + + + + G R 
Sbjct: 1  MIKALYTSITGMNAAQNALSVTSNNIANAQTVG------YKKQKAIFDDLLYNNTVGSRG 54

Query: 64 KKIGVDQST 72
                 + 
Sbjct: 55 DGAYAGTNP 63


>gi|229524192|ref|ZP_04413597.1| flagellar hook protein FlgE [Vibrio cholerae bv. albensis VL426]
 gi|229337773|gb|EEO02790.1| flagellar hook protein FlgE [Vibrio cholerae bv. albensis VL426]
          Length = 434

 Score = 49.5 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/84 (15%), Positives = 36/84 (42%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
            ++ E+ +   GG +        +    E + G   + ++G ++  N+++  E  D+   
Sbjct: 350 RVANEQGLDKKGGTQWDATQFSGAKIWGESNKGSFGSISNGSLEQSNIDMTQELVDLISA 409

Query: 108 NRLYMANLQTIKQSHDMMTTTLDL 131
            R + AN + ++  + +    L +
Sbjct: 410 QRNFQANSRALEVHNGLQQNILQI 433



 Score = 38.7 bits (88), Expect = 0.26,   Method: Composition-based stats.
 Identities = 11/35 (31%), Positives = 16/35 (45%)

Query: 10 IANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          ++ SGL+     +   S NIANA T G       +
Sbjct: 4  VSLSGLSAAQMDLNTTSNNIANANTFGFKESRAEF 38


>gi|228952133|ref|ZP_04114228.1| Flagellar hook protein FlgE [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
 gi|228807665|gb|EEM54189.1| Flagellar hook protein FlgE [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
          Length = 437

 Score = 49.5 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 11/62 (17%), Positives = 24/62 (38%)

Query: 72  TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             +                +  NV++  E  D+    R +  N + IK S +++   ++L
Sbjct: 376 PGIGVAGENGAGNVRGSAKESSNVDLSAEFVDLMLYQRGFQGNAKVIKVSDEVLNEVVNL 435

Query: 132 LR 133
           +R
Sbjct: 436 IR 437



 Score = 40.2 bits (92), Expect = 0.11,   Method: Composition-based stats.
 Identities = 14/69 (20%), Positives = 30/69 (43%), Gaps = 6/69 (8%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I + + + +G+      + + S NIANA+T G        ++K I  + + + + G R 
Sbjct: 1  MIKALYTSITGMNAAQNALSVTSNNIANAQTVG------YKKQKAIFDDLLYNNTVGSRG 54

Query: 64 KKIGVDQST 72
                 + 
Sbjct: 55 DGAYAGTNP 63


>gi|170748125|ref|YP_001754385.1| flagellar hook protein FlgE [Methylobacterium radiotolerans JCM
           2831]
 gi|170654647|gb|ACB23702.1| flagellar basal body FlaE domain protein [Methylobacterium
           radiotolerans JCM 2831]
          Length = 407

 Score = 49.5 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/82 (17%), Positives = 29/82 (35%)

Query: 52  EEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
            + +    G             +   + G      S +++   V++  E A M E    Y
Sbjct: 326 PDNLTPRAGNVFDVNPESGPAQIGFANVGGRGHIQSKMLENSTVDLGNELATMIEAQTTY 385

Query: 112 MANLQTIKQSHDMMTTTLDLLR 133
            AN +  +   +M+   ++L R
Sbjct: 386 GANSKVFQTGSEMLELLVNLKR 407



 Score = 41.4 bits (95), Expect = 0.044,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 25/64 (39%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            L    H   SG+  QS R+  +++NI N  TTG    S  +    I      + +G V
Sbjct: 1  MGLYGVLHAGVSGMNAQSNRLGTVADNIQNQNTTGYKRASTEFSSLLIDPSPGSYDAGSV 60

Query: 62 RVKK 65
              
Sbjct: 61 DTVV 64


>gi|196033295|ref|ZP_03100707.1| putative flagellar hook protein FlgE [Bacillus cereus W]
 gi|195993729|gb|EDX57685.1| putative flagellar hook protein FlgE [Bacillus cereus W]
          Length = 437

 Score = 49.5 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 12/62 (19%), Positives = 25/62 (40%)

Query: 72  TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             +                +  NV++ VE  D+    R +  N + IK S +++   ++L
Sbjct: 376 PGIGVAGENGAGNVRGSAKESSNVDLSVEFVDLMLYQRGFQGNAKVIKVSDEVLNEVVNL 435

Query: 132 LR 133
           +R
Sbjct: 436 IR 437



 Score = 41.0 bits (94), Expect = 0.050,   Method: Composition-based stats.
 Identities = 13/103 (12%), Positives = 36/103 (34%), Gaps = 7/103 (6%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +I + + + +G+      + + S NIANA+T G       Y+++   F+++++ +     
Sbjct: 1   MIKALYTSITGMNAAQNALSVTSNNIANAQTVG-------YKKQKAIFDDLLYNNTVGSR 53

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
                  +      +       ++            +     E
Sbjct: 54  GDGAYAGTNPKSIGNVVKFSGTSTDFSDGSITLTSDKMETAIE 96


>gi|77359722|ref|YP_339297.1| flagellar hook protein FlgE [Pseudoalteromonas haloplanktis TAC125]
 gi|76874633|emb|CAI85854.1| flagellar biosynthesis; hook protein [Pseudoalteromonas
           haloplanktis TAC125]
          Length = 454

 Score = 49.5 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 15/84 (17%), Positives = 29/84 (34%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
             S  + +   G    K           E   G      S  ++  NVN+  E  D+   
Sbjct: 370 RFSNSQGLQQVGSTGWKASIASGEPIAGEPGSGTLGNINSSALEQSNVNLTNELVDLISA 429

Query: 108 NRLYMANLQTIKQSHDMMTTTLDL 131
            R + AN + ++ +  +  + L +
Sbjct: 430 QRNFQANSRALEVNSTIQQSILQI 453



 Score = 41.4 bits (95), Expect = 0.040,   Method: Composition-based stats.
 Identities = 14/39 (35%), Positives = 19/39 (48%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          S +IA SGLA     + + + NIAN  TTG       + 
Sbjct: 2  SFNIALSGLAAAQKDLNVTANNIANVNTTGFKESRAEFA 40


>gi|68164545|gb|AAY87274.1| predicted flagellar proximal rod protein [uncultured bacterium
           BAC17H8]
          Length = 251

 Score = 49.5 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/102 (18%), Positives = 34/102 (33%), Gaps = 3/102 (2%)

Query: 32  ARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVK 91
               G  PG++    +                 +I ++  T          VA     ++
Sbjct: 150 IEPLGSDPGTEQLVARLAMTLAEGRELNKFADGEIRLEDGTVPPVSADMRVVAK---HLE 206

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             NVNV  E  +  E  R Y  N++ I  + ++      L+R
Sbjct: 207 LSNVNVTEELINSIEDQRAYEINVKMIASASELDEAGAALMR 248


>gi|229144365|ref|ZP_04272771.1| Flagellar hook protein FlgE [Bacillus cereus BDRD-ST24]
 gi|228639152|gb|EEK95576.1| Flagellar hook protein FlgE [Bacillus cereus BDRD-ST24]
          Length = 437

 Score = 49.1 bits (115), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 12/62 (19%), Positives = 25/62 (40%)

Query: 72  TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             +                +  NV++ VE  D+    R +  N + IK S +++   ++L
Sbjct: 376 PGIGVAGENGAGNVRGSAKESSNVDLSVEFVDLMLYQRGFQGNAKVIKVSDEVLNEVVNL 435

Query: 132 LR 133
           +R
Sbjct: 436 IR 437



 Score = 39.9 bits (91), Expect = 0.12,   Method: Composition-based stats.
 Identities = 14/69 (20%), Positives = 30/69 (43%), Gaps = 6/69 (8%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I + + + +G+      + + S NIANA+T G        ++K I  + + + + G R 
Sbjct: 1  MIKALYTSITGMNAAQNALSVTSNNIANAQTVG------YKKQKAIFDDLLYNNTVGSRG 54

Query: 64 KKIGVDQST 72
                 + 
Sbjct: 55 DGAYAGTNP 63


>gi|170725956|ref|YP_001759982.1| flagellar basal body rod protein FlgF [Shewanella woodyi ATCC
           51908]
 gi|169811303|gb|ACA85887.1| flagellar basal-body rod protein FlgF [Shewanella woodyi ATCC
           51908]
          Length = 247

 Score = 49.1 bits (115), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/95 (18%), Positives = 39/95 (41%), Gaps = 1/95 (1%)

Query: 40  GSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPV-ANASGIVKYPNVNVL 98
           G+     + +   ++++   G  ++           E  P  P  A  SG V+  NVN +
Sbjct: 151 GATAEVIEEVGRIKLVNPGDGNMMRGADGLFRQMSGEIAPADPRVAVESGAVEGSNVNAV 210

Query: 99  VETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            E   + +  R +   ++ +K + +M   +  L+R
Sbjct: 211 DEMVSLIDIQRQFEMQVKMMKTAEEMDQASSSLMR 245


>gi|322806996|emb|CBZ04566.1| flagellar basal-body rod protein FlgC [Clostridium botulinum
          H04402 065]
          Length = 77

 Score = 49.1 bits (115), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/46 (36%), Positives = 23/46 (50%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR 46
          M     +  I+ SGL+ +  RM  I+ NIANA TT    G    R+
Sbjct: 1  MIKAFDTMRISASGLSAERLRMDTIASNIANATTTRTENGGPYKRK 46


>gi|87119676|ref|ZP_01075573.1| hypothetical protein MED121_07045 [Marinomonas sp. MED121]
 gi|86165152|gb|EAQ66420.1| hypothetical protein MED121_07045 [Marinomonas sp. MED121]
          Length = 565

 Score = 49.1 bits (115), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 28/58 (48%)

Query: 74  VEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           V + + G   +     ++  NV++  E   + E  R Y AN +T++  + +  T ++L
Sbjct: 507 VGKPNTGTLGSVQGAALEESNVDLTSELVALIEAQRNYQANSKTLETENTVTQTIINL 564


>gi|317121026|ref|YP_004101029.1| flagellar hook-basal body protein [Thermaerobacter marianensis DSM
           12885]
 gi|315591006|gb|ADU50302.1| flagellar hook-basal body protein [Thermaerobacter marianensis DSM
           12885]
          Length = 289

 Score = 49.1 bits (115), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 23/48 (47%), Gaps = 1/48 (2%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             G+++  NV++ VE   +    R Y  N + +    +MM   ++ LR
Sbjct: 242 RQGMLEQANVDLAVEMTRLLAAQRAYQLNARAVLTGDEMMG-LINRLR 288


>gi|242238969|ref|YP_002987150.1| flagellar hook protein FlgE [Dickeya dadantii Ech703]
 gi|242131026|gb|ACS85328.1| flagellar basal body FlaE domain protein [Dickeya dadantii Ech703]
          Length = 399

 Score = 49.1 bits (115), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 15/46 (32%), Positives = 25/46 (54%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            SG ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 353 TSGALESSNVDISQELVNMIVAQRNYQSNAQTIKTQDAILNTLVNL 398


>gi|49480337|ref|YP_035873.1| flagellar hook protein FlgE [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|49331893|gb|AAT62539.1| flagellar hook protein [Bacillus thuringiensis serovar konkukian
           str. 97-27]
          Length = 437

 Score = 49.1 bits (115), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 12/62 (19%), Positives = 25/62 (40%)

Query: 72  TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             +                +  NV++ VE  D+    R +  N + IK S +++   ++L
Sbjct: 376 PGIGVAGENGAGNVRGSAKESSNVDLSVEFVDLMLYQRGFQGNAKVIKVSDEVLNEVVNL 435

Query: 132 LR 133
           +R
Sbjct: 436 IR 437



 Score = 39.9 bits (91), Expect = 0.12,   Method: Composition-based stats.
 Identities = 14/69 (20%), Positives = 30/69 (43%), Gaps = 6/69 (8%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I + + + +G+      + + S NIANA+T G        ++K I  + + + + G R 
Sbjct: 1  MIKALYTSITGMNAAQNALSVTSNNIANAQTVG------YKKQKAIFDDLLYNNTVGSRG 54

Query: 64 KKIGVDQST 72
                 + 
Sbjct: 55 DGAYAGTNP 63


>gi|297580843|ref|ZP_06942768.1| flagellar hook protein FlgE [Vibrio cholerae RC385]
 gi|297534669|gb|EFH73505.1| flagellar hook protein FlgE [Vibrio cholerae RC385]
          Length = 434

 Score = 49.1 bits (115), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/84 (15%), Positives = 36/84 (42%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
            ++ E+ +   GG +        +    E + G   + ++G ++  N+++  E  D+   
Sbjct: 350 RVANEQGLDKKGGTQWDATQFSGAKIWGESNKGSFGSISNGSLEQSNIDMTQELVDLISA 409

Query: 108 NRLYMANLQTIKQSHDMMTTTLDL 131
            R + AN + ++  + +    L +
Sbjct: 410 QRNFQANSRALEVHNGLQQNILQI 433



 Score = 38.7 bits (88), Expect = 0.27,   Method: Composition-based stats.
 Identities = 11/35 (31%), Positives = 16/35 (45%)

Query: 10 IANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          ++ SGL+     +   S NIANA T G       +
Sbjct: 4  VSLSGLSAAQMDLNTTSNNIANANTFGFKESRAEF 38


>gi|302670727|ref|YP_003830687.1| flagellar hook protein FlgE1 [Butyrivibrio proteoclasticus B316]
 gi|302395200|gb|ADL34105.1| flagellar hook protein FlgE1 [Butyrivibrio proteoclasticus B316]
          Length = 1049

 Score = 49.1 bits (115), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 12/49 (24%), Positives = 25/49 (51%)

Query: 85   NASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
              +G+++  NV++  +  +M  T R + AN + I  S  ++    +L R
Sbjct: 1001 MNTGVLEMSNVDLSSQFTEMITTQRGFQANSRIITVSDTLLEELTNLKR 1049



 Score = 35.2 bits (79), Expect = 2.9,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 19/41 (46%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          ++ S +   +GL     +M +I  NIAN  TT     S  +
Sbjct: 1  MMRSLYSGVAGLKTHQTKMDVIGNNIANVNTTSFKSQSITF 41


>gi|21242727|ref|NP_642309.1| flagellar hook protein FlgE [Xanthomonas axonopodis pv. citri str.
           306]
 gi|294625274|ref|ZP_06703913.1| flagellar biosynthesis hook protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|294664591|ref|ZP_06729932.1| flagellar biosynthesis hook protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
 gi|325927875|ref|ZP_08189099.1| flagellar hook protein FlgE [Xanthomonas perforans 91-118]
 gi|21108203|gb|AAM36845.1| flagellar biosynthesis hook protein [Xanthomonas axonopodis pv.
           citri str. 306]
 gi|292600448|gb|EFF44546.1| flagellar biosynthesis hook protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|292605648|gb|EFF48958.1| flagellar biosynthesis hook protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
 gi|325541715|gb|EGD13233.1| flagellar hook protein FlgE [Xanthomonas perforans 91-118]
          Length = 407

 Score = 49.1 bits (115), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 12/83 (14%), Positives = 27/83 (32%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
               + +   G     +     +      D        SG ++   V++  +  +M    
Sbjct: 324 FVNPQGLQSQGNNMWAESYTSGAARTGAPDTSDLGQIESGSLEASTVDLTEQLVNMIVAQ 383

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R + AN Q I     +  T +++
Sbjct: 384 RNFQANSQMISTQDQVTQTIINI 406



 Score = 34.8 bits (78), Expect = 4.3,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 18/39 (46%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
            + + SG+   +A + + S NIAN  TTG       + 
Sbjct: 2  GFNTSLSGINAANADLNVTSNNIANVNTTGFKESRAEFA 40


>gi|15642196|ref|NP_231828.1| flagellar hook protein FlgE [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121586263|ref|ZP_01676053.1| flagellar hook protein FlgE [Vibrio cholerae 2740-80]
 gi|121726540|ref|ZP_01679789.1| flagellar hook protein FlgE [Vibrio cholerae V52]
 gi|147674037|ref|YP_001217714.1| flagellar hook protein FlgE [Vibrio cholerae O395]
 gi|153213649|ref|ZP_01948922.1| flagellar hook protein FlgE [Vibrio cholerae 1587]
 gi|153817107|ref|ZP_01969774.1| flagellar hook protein FlgE [Vibrio cholerae NCTC 8457]
 gi|153820826|ref|ZP_01973493.1| flagellar hook protein FlgE [Vibrio cholerae B33]
 gi|153825324|ref|ZP_01977991.1| flagellar hook protein FlgE [Vibrio cholerae MZO-2]
 gi|153829329|ref|ZP_01981996.1| flagellar hook protein FlgE [Vibrio cholerae 623-39]
 gi|183179565|ref|ZP_02957776.1| flagellar hook protein FlgE [Vibrio cholerae MZO-3]
 gi|227082321|ref|YP_002810872.1| flagellar hook protein FlgE [Vibrio cholerae M66-2]
 gi|229507726|ref|ZP_04397231.1| flagellar hook protein FlgE [Vibrio cholerae BX 330286]
 gi|229512079|ref|ZP_04401558.1| flagellar hook protein FlgE [Vibrio cholerae B33]
 gi|229513841|ref|ZP_04403303.1| flagellar hook protein FlgE [Vibrio cholerae TMA 21]
 gi|229519215|ref|ZP_04408658.1| flagellar hook protein FlgE [Vibrio cholerae RC9]
 gi|229522146|ref|ZP_04411563.1| flagellar hook protein FlgE [Vibrio cholerae TM 11079-80]
 gi|229528798|ref|ZP_04418188.1| flagellar hook protein FlgE [Vibrio cholerae 12129(1)]
 gi|229607230|ref|YP_002877878.1| flagellar hook protein FlgE [Vibrio cholerae MJ-1236]
 gi|254225801|ref|ZP_04919406.1| flagellar hook protein FlgE [Vibrio cholerae V51]
 gi|254849326|ref|ZP_05238676.1| flagellar hook protein FlgE [Vibrio cholerae MO10]
 gi|255747104|ref|ZP_05421049.1| flagellar hook protein FlgE [Vibrio cholera CIRS 101]
 gi|262161352|ref|ZP_06030462.1| flagellar hook protein FlgE [Vibrio cholerae INDRE 91/1]
 gi|262167777|ref|ZP_06035479.1| flagellar hook protein FlgE [Vibrio cholerae RC27]
 gi|262191689|ref|ZP_06049865.1| flagellar hook protein FlgE [Vibrio cholerae CT 5369-93]
 gi|298500425|ref|ZP_07010230.1| flagellar hook protein FlgE [Vibrio cholerae MAK 757]
 gi|9656753|gb|AAF95342.1| flagellar hook protein FlgE [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121549529|gb|EAX59555.1| flagellar hook protein FlgE [Vibrio cholerae 2740-80]
 gi|121630993|gb|EAX63372.1| flagellar hook protein FlgE [Vibrio cholerae V52]
 gi|124115848|gb|EAY34668.1| flagellar hook protein FlgE [Vibrio cholerae 1587]
 gi|125621707|gb|EAZ50036.1| flagellar hook protein FlgE [Vibrio cholerae V51]
 gi|126512375|gb|EAZ74969.1| flagellar hook protein FlgE [Vibrio cholerae NCTC 8457]
 gi|126521618|gb|EAZ78841.1| flagellar hook protein FlgE [Vibrio cholerae B33]
 gi|146315920|gb|ABQ20459.1| flagellar hook protein FlgE [Vibrio cholerae O395]
 gi|148875170|gb|EDL73305.1| flagellar hook protein FlgE [Vibrio cholerae 623-39]
 gi|149741008|gb|EDM55077.1| flagellar hook protein FlgE [Vibrio cholerae MZO-2]
 gi|183012976|gb|EDT88276.1| flagellar hook protein FlgE [Vibrio cholerae MZO-3]
 gi|227010209|gb|ACP06421.1| flagellar hook protein FlgE [Vibrio cholerae M66-2]
 gi|227014093|gb|ACP10303.1| flagellar hook protein FlgE [Vibrio cholerae O395]
 gi|229332572|gb|EEN98058.1| flagellar hook protein FlgE [Vibrio cholerae 12129(1)]
 gi|229341071|gb|EEO06076.1| flagellar hook protein FlgE [Vibrio cholerae TM 11079-80]
 gi|229343904|gb|EEO08879.1| flagellar hook protein FlgE [Vibrio cholerae RC9]
 gi|229349022|gb|EEO13979.1| flagellar hook protein FlgE [Vibrio cholerae TMA 21]
 gi|229352044|gb|EEO16985.1| flagellar hook protein FlgE [Vibrio cholerae B33]
 gi|229355231|gb|EEO20152.1| flagellar hook protein FlgE [Vibrio cholerae BX 330286]
 gi|229369885|gb|ACQ60308.1| flagellar hook protein FlgE [Vibrio cholerae MJ-1236]
 gi|254845031|gb|EET23445.1| flagellar hook protein FlgE [Vibrio cholerae MO10]
 gi|255735506|gb|EET90906.1| flagellar hook protein FlgE [Vibrio cholera CIRS 101]
 gi|262023842|gb|EEY42541.1| flagellar hook protein FlgE [Vibrio cholerae RC27]
 gi|262028663|gb|EEY47317.1| flagellar hook protein FlgE [Vibrio cholerae INDRE 91/1]
 gi|262032428|gb|EEY50990.1| flagellar hook protein FlgE [Vibrio cholerae CT 5369-93]
 gi|297541118|gb|EFH77172.1| flagellar hook protein FlgE [Vibrio cholerae MAK 757]
 gi|327484716|gb|AEA79123.1| Flagellar hook protein FlgE [Vibrio cholerae LMA3894-4]
          Length = 434

 Score = 49.1 bits (115), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/84 (15%), Positives = 36/84 (42%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
            ++ E+ +   GG +        +    E + G   + ++G ++  N+++  E  D+   
Sbjct: 350 RVANEQGLDKKGGTQWDATQFSGAKIWGESNKGSFGSISNGSLEQSNIDMTQELVDLISA 409

Query: 108 NRLYMANLQTIKQSHDMMTTTLDL 131
            R + AN + ++  + +    L +
Sbjct: 410 QRNFQANSRALEVHNGLQQNILQI 433



 Score = 38.7 bits (88), Expect = 0.28,   Method: Composition-based stats.
 Identities = 11/35 (31%), Positives = 16/35 (45%)

Query: 10 IANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          ++ SGL+     +   S NIANA T G       +
Sbjct: 4  VSLSGLSAAQMDLNTTSNNIANANTFGFKESRAEF 38


>gi|54307270|ref|YP_128290.1| flagellar hook protein FlgE [Photobacterium profundum SS9]
 gi|46911690|emb|CAG18488.1| Hypothetical flagellar hook protein FlgE [Photobacterium profundum
           SS9]
          Length = 472

 Score = 49.1 bits (115), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/83 (19%), Positives = 31/83 (37%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
               +E +  +G  R  +     +  V     G      +G+ +  NV++  E  ++   
Sbjct: 388 RFPNQEGLQQAGNTRWTQSFSSGAALVGAAGTGQLGNVRTGMYENSNVDLSSEMVNLMSA 447

Query: 108 NRLYMANLQTIKQSHDMMTTTLD 130
              Y AN +TIK + +M      
Sbjct: 448 QSNYQANAKTIKVAQEMTQILFQ 470



 Score = 36.0 bits (81), Expect = 1.7,   Method: Composition-based stats.
 Identities = 15/39 (38%), Positives = 19/39 (48%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          S +I  SGL   S +M  IS NIAN  T G       ++
Sbjct: 2  SMNIGMSGLIATSEQMNSISHNIANVGTAGYKSSRTEFQ 40


>gi|325921024|ref|ZP_08182906.1| flagellar hook protein FlgE [Xanthomonas gardneri ATCC 19865]
 gi|325548506|gb|EGD19478.1| flagellar hook protein FlgE [Xanthomonas gardneri ATCC 19865]
          Length = 407

 Score = 49.1 bits (115), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 12/83 (14%), Positives = 28/83 (33%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
               + +   G     +     +  +   D        SG ++   V++  +  +M    
Sbjct: 324 FVNPQGLQSQGNNMWAESYTSGAARIGAPDTSDLGQIESGSLEASTVDLTEQLVNMIVAQ 383

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R + AN Q I     +  T +++
Sbjct: 384 RNFQANSQMISTQDQVTQTIINI 406



 Score = 35.2 bits (79), Expect = 2.7,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 19/39 (48%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          + + + SG+   +A + + S NIAN  TTG       + 
Sbjct: 2  AFNTSLSGINAANADLNVTSNNIANVNTTGFKESRAEFA 40


>gi|296282279|ref|ZP_06860277.1| hypothetical protein CbatJ_01595 [Citromicrobium bathyomarinum
           JL354]
          Length = 269

 Score = 49.1 bits (115), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 23/48 (47%)

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           A  SG ++  NV++  E   +    R + AN + I  +  +  T ++L
Sbjct: 220 ALLSGSLERSNVDIAEELVGLITAQRNFQANAKAIDTATQISQTVMNL 267


>gi|330502734|ref|YP_004379603.1| flagellar hook protein FlgE [Pseudomonas mendocina NK-01]
 gi|328917020|gb|AEB57851.1| flagellar hook protein FlgE [Pseudomonas mendocina NK-01]
          Length = 456

 Score = 49.1 bits (115), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 12/64 (18%), Positives = 25/64 (39%)

Query: 68  VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
                 +         A  +G ++  NV +  +  ++    R Y AN +TI+    +  T
Sbjct: 392 ESGEPVIGTPRSSTLGALQAGALEDSNVELSDQLVNLIVAQRNYQANAKTIETESAITQT 451

Query: 128 TLDL 131
            ++L
Sbjct: 452 IINL 455



 Score = 35.2 bits (79), Expect = 3.1,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 18/39 (46%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          S +I  SGL   ++ + +   NIANA T G       + 
Sbjct: 2  SFNIGLSGLRAATSDLNVTGNNIANAGTAGFKQSRAEFA 40


>gi|238782792|ref|ZP_04626821.1| Flagellar basal body FlaE domain protein [Yersinia bercovieri ATCC
           43970]
 gi|238716215|gb|EEQ08198.1| Flagellar basal body FlaE domain protein [Yersinia bercovieri ATCC
           43970]
          Length = 359

 Score = 49.1 bits (115), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 26/67 (38%)

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           +              G+    +   ++  NV++  E  +M    R Y +N QTIK   ++
Sbjct: 292 ETPESGQPVTGISGTGNLGKLSGNKLEASNVDLSKEMVNMIVYQRNYQSNSQTIKTQSEL 351

Query: 125 MTTTLDL 131
           +    +L
Sbjct: 352 LQILANL 358


>gi|222148673|ref|YP_002549630.1| flagellar hook protein [Agrobacterium vitis S4]
 gi|221735659|gb|ACM36622.1| flagellar hook protein [Agrobacterium vitis S4]
          Length = 108

 Score = 49.1 bits (115), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/133 (21%), Positives = 40/133 (30%), Gaps = 25/133 (18%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             +    + A SG+  Q  R+  I+ NIANA T G                     + G 
Sbjct: 1   MSISGVLNSATSGMLAQQTRLTNIASNIANADTPG------------YQRLNTTLSASGS 48

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
            V       +      D               NV+ L E  DM        AN +  +  
Sbjct: 49  GVAATTTRSTDAPATQD-------------TSNVDPLREITDMIGAENGLAANAKVFETG 95

Query: 122 HDMMTTTLDLLRD 134
            DM    + + RD
Sbjct: 96  ADMWDMLMSVKRD 108


>gi|170703096|ref|ZP_02893916.1| flagellar basal body FlaE domain protein [Burkholderia ambifaria
           IOP40-10]
 gi|170131993|gb|EDT00501.1| flagellar basal body FlaE domain protein [Burkholderia ambifaria
           IOP40-10]
          Length = 413

 Score = 49.1 bits (115), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/83 (16%), Positives = 30/83 (36%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +    +   GG +  +        +      +        ++  NV++  +  ++    
Sbjct: 331 FNNPNGLVNLGGNQYAESSASGVPQISAPGSTNHGVLQGSALENSNVDLTSQLVNLITAQ 390

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y AN QTIK    +  T ++L
Sbjct: 391 RNYQANAQTIKTQQTVDQTLINL 413


>gi|172061972|ref|YP_001809624.1| flagellar hook protein FlgE [Burkholderia ambifaria MC40-6]
 gi|171994489|gb|ACB65408.1| flagellar basal body FlaE domain protein [Burkholderia ambifaria
           MC40-6]
          Length = 413

 Score = 49.1 bits (115), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/83 (16%), Positives = 30/83 (36%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +    +   GG +  +        +      +        ++  NV++  +  ++    
Sbjct: 331 FNNPNGLVNLGGNQYAESSASGVPQISAPGSTNHGVLQGSALENSNVDLTSQLVNLITAQ 390

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y AN QTIK    +  T ++L
Sbjct: 391 RNYQANAQTIKTQQTVDQTLINL 413


>gi|261211322|ref|ZP_05925610.1| flagellar hook protein FlgE [Vibrio sp. RC341]
 gi|260839277|gb|EEX65903.1| flagellar hook protein FlgE [Vibrio sp. RC341]
          Length = 434

 Score = 49.1 bits (115), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/84 (15%), Positives = 36/84 (42%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
            ++ E+ +   GG +        +    E + G   + ++G ++  N+++  E  D+   
Sbjct: 350 RVANEQGLDKKGGTQWDATQFSGAKIWGESNKGSFGSISNGSLEQSNIDMTQELVDLISA 409

Query: 108 NRLYMANLQTIKQSHDMMTTTLDL 131
            R + AN + ++  + +    L +
Sbjct: 410 QRNFQANSRALEVHNGLQQNILQI 433



 Score = 38.7 bits (88), Expect = 0.29,   Method: Composition-based stats.
 Identities = 11/35 (31%), Positives = 16/35 (45%)

Query: 10 IANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          ++ SGL+     +   S NIANA T G       +
Sbjct: 4  VSLSGLSAAQMDLNTTSNNIANANTFGFKESRAEF 38


>gi|323527713|ref|YP_004229866.1| flagellar hook-basal body protein [Burkholderia sp. CCGE1001]
 gi|323384715|gb|ADX56806.1| flagellar hook-basal body protein [Burkholderia sp. CCGE1001]
          Length = 502

 Score = 49.1 bits (115), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/83 (21%), Positives = 31/83 (37%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            S +  +   G    ++        +      +      G V+  NV++  E  D+    
Sbjct: 420 FSNQNGLVNLGNNEFQQTSQSGVAQISAPGSTNHGVLQGGAVENSNVDLTSELVDLITAQ 479

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y AN QTIK    +  T ++L
Sbjct: 480 RNYQANAQTIKTQQTVDQTLINL 502


>gi|268679766|ref|YP_003304197.1| flagellar hook-associated protein FlgK [Sulfurospirillum deleyianum
           DSM 6946]
 gi|268617797|gb|ACZ12162.1| flagellar hook-associated protein FlgK [Sulfurospirillum deleyianum
           DSM 6946]
          Length = 614

 Score = 49.1 bits (115), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 37/108 (34%), Gaps = 2/108 (1%)

Query: 27  ENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHP--VA 84
             +ANA           Y +   S ++ + G       KIG D ST    +D       +
Sbjct: 506 NKVANAMVQMQYSTLGFYSKTGSSVQDTIEGFYSSLTTKIGSDASTANSNYDTNDALYSS 565

Query: 85  NASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
             +       VN   E A++ +    Y A  + I     M+ T L + 
Sbjct: 566 VYTQYQSVSGVNKDEELANLIQYQSSYSAAAKIITTIDQMLETLLGIK 613



 Score = 40.6 bits (93), Expect = 0.073,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 22/73 (30%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            + ++ +   S L      +   S+NIAN      T              + +    GV
Sbjct: 1  MGIFSTLNTGTSALNAAQVAVATTSQNIANVDNPYYTRQRVTLSASDALNTKGVSIGTGV 60

Query: 62 RVKKIGVDQSTFV 74
           +  I      FV
Sbjct: 61 SITSIVRIHDEFV 73


>gi|307266108|ref|ZP_07547653.1| flagellar basal-body rod protein FlgF [Thermoanaerobacter wiegelii
           Rt8.B1]
 gi|306918890|gb|EFN49119.1| flagellar basal-body rod protein FlgF [Thermoanaerobacter wiegelii
           Rt8.B1]
          Length = 251

 Score = 49.1 bits (115), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 20/45 (44%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             G ++  NVN + E  +M    R Y +N + +    + +   ++
Sbjct: 202 KQGFLEQSNVNSVKEMVNMISVMRNYESNQKVVIAFDETLGKAVN 246



 Score = 39.9 bits (91), Expect = 0.13,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 24/67 (35%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++   + A+SG+  Q+  M +++ N+AN  T G                    G      
Sbjct: 1  MLRGLYTASSGMITQTKIMDVLANNLANVNTVGYKRDVVVTSSFPNFEVTRHGGDNTPPN 60

Query: 64 KKIGVDQ 70
           KIG   
Sbjct: 61 GKIGRMD 67


>gi|206603526|gb|EDZ40006.1| Putative flagellar basal body rod protein [Leptospirillum sp. Group
           II '5-way CG']
          Length = 267

 Score = 49.1 bits (115), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 33/85 (38%)

Query: 46  RKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
           R       V+  +G   + K+G        +  P       +G  +  NVN   E   M 
Sbjct: 177 RVMGRLAVVVPENGTEHLAKVGDGLFMGDGKIAPVADPDVLAGGFESSNVNGTFEMVRMI 236

Query: 106 ETNRLYMANLQTIKQSHDMMTTTLD 130
           E  R +  +L+ ++  +++   T++
Sbjct: 237 EAMRSFETHLKALQTLNELTRRTVN 261



 Score = 36.8 bits (83), Expect = 1.1,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 20/63 (31%), Gaps = 3/63 (4%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSD---PYRRKTISFEEVMHGSGGVRVKKIGVD 69
          SG   Q   M +++ N+AN  T G          Y        +      G R+   G  
Sbjct: 10 SGAQAQEQLMDVLTNNLANVNTPGFKRDRVTFRTYLPHREWLHKTPSDQPGFRMTPWGEF 69

Query: 70 QST 72
           + 
Sbjct: 70 PTP 72


>gi|307719963|ref|YP_003891103.1| flagellar hook-basal body protein [Sulfurimonas autotrophica DSM
           16294]
 gi|306978056|gb|ADN08091.1| flagellar hook-basal body protein [Sulfurimonas autotrophica DSM
           16294]
          Length = 420

 Score = 49.1 bits (115), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 20/42 (47%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           ++  N+ +     ++    R Y AN +++  +  MM   L++
Sbjct: 377 LEGSNIEMSYGLTELIILQRAYDANSKSVTTADQMMQKALNM 418


>gi|121602345|ref|YP_989400.1| flagellar basal body rod protein FlgG [Bartonella bacilliformis
           KC583]
 gi|120614522|gb|ABM45123.1| flagellar basal-body rod protein FlgG [Bartonella bacilliformis
           KC583]
          Length = 264

 Score = 49.1 bits (115), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 15/96 (15%), Positives = 33/96 (34%), Gaps = 5/96 (5%)

Query: 35  TGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVAN-----ASGI 89
                 +DP     ++    ++  G   V      ++       PG+P  +         
Sbjct: 161 YKPAEEADPVEAGRLNLVNFVNEVGLEPVGDNLFRETPASGAPVPGNPKEDGYGSIMQAT 220

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           ++  NV+ + E  ++    R Y    + I+ S +M 
Sbjct: 221 LEASNVDPVKEITELITAQRSYEMTSKVIQASDEMA 256



 Score = 43.7 bits (101), Expect = 0.009,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 25/64 (39%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          + S  IA +G+A Q   + +I+ N+AN  TTG       +       +  +     +   
Sbjct: 3  MRSLSIAATGMAAQQTNLDVIANNLANINTTGYKRARAEFADLMYVTDRAVGVPNMMNQA 62

Query: 65 KIGV 68
           +  
Sbjct: 63 IVPE 66


>gi|330811235|ref|YP_004355697.1| flagellar hook protein [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327379343|gb|AEA70693.1| Putative flagellar hook protein [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 432

 Score = 49.1 bits (115), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/103 (19%), Positives = 38/103 (36%), Gaps = 1/103 (0%)

Query: 29  IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASG 88
           +AN       P        + + E+ +   GG   K+         +    G   +  S 
Sbjct: 330 LANFSNNQTKPIGQ-LALASFTNEQGLQPVGGTSWKETFASGIPGYDAPQTGTLGSIVSN 388

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            ++  NVN+  E  ++ +    Y AN +TI     +M T + +
Sbjct: 389 SLEESNVNLTNELVELIKAQSNYQANAKTISTQSTIMQTIIQM 431



 Score = 34.1 bits (76), Expect = 7.5,   Method: Composition-based stats.
 Identities = 12/38 (31%), Positives = 18/38 (47%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          S +I  SGL   + ++ +   NIAN  TTG       +
Sbjct: 2  SFNIGLSGLYAANKQLDVTGNNIANVATTGFKSSRAEF 39


>gi|325918877|ref|ZP_08180954.1| flagellar hook protein FlgE [Xanthomonas vesicatoria ATCC 35937]
 gi|325534914|gb|EGD06833.1| flagellar hook protein FlgE [Xanthomonas vesicatoria ATCC 35937]
          Length = 407

 Score = 49.1 bits (115), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 12/83 (14%), Positives = 27/83 (32%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
               + +   G     +     +      D        SG ++   V++  +  +M    
Sbjct: 324 FVNPQGLQSQGNNMWAESYTSGAARTGAPDTSDLGQIESGSLEASTVDLTEQLVNMIVAQ 383

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R + AN Q I     +  T +++
Sbjct: 384 RNFQANSQMISTQDQVTQTIINI 406



 Score = 35.6 bits (80), Expect = 2.4,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 19/39 (48%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          + + + SG+   +A + + S NIAN  TTG       + 
Sbjct: 2  AFNTSLSGINAANADLNVTSNNIANVNTTGFKESRAEFA 40


>gi|296157456|ref|ZP_06840291.1| fagellar hook-basal body protein [Burkholderia sp. Ch1-1]
 gi|295892228|gb|EFG72011.1| fagellar hook-basal body protein [Burkholderia sp. Ch1-1]
          Length = 503

 Score = 49.1 bits (115), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/83 (21%), Positives = 31/83 (37%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            S +  +   G    ++        +      +      G V+  NV++  E  D+    
Sbjct: 421 FSNQNGLVNLGNNEFQQTSQSGVAQISAPGSTNHGVLQGGAVENSNVDLTSELVDLITAQ 480

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y AN QTIK    +  T ++L
Sbjct: 481 RNYQANAQTIKTQQTVDQTLINL 503


>gi|188592117|ref|YP_001796715.1| flagellar hook protein flge [Cupriavidus taiwanensis LMG 19424]
 gi|170938491|emb|CAP63478.1| FlgE: Flagellar hook protein [Cupriavidus taiwanensis LMG 19424]
          Length = 414

 Score = 49.1 bits (115), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 15/46 (32%), Positives = 24/46 (52%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            S  V+  NV++  +  ++    R Y AN QTIK    +M T ++L
Sbjct: 369 RSNAVEASNVDLSGQLVNLIVAQRNYQANAQTIKAQDTVMQTLVNL 414


>gi|294084417|ref|YP_003551175.1| flagellar proximal rod protein FlgF [Candidatus Puniceispirillum
           marinum IMCC1322]
 gi|292663990|gb|ADE39091.1| flagellar proximal rod protein FlgF [Candidatus Puniceispirillum
           marinum IMCC1322]
          Length = 251

 Score = 49.1 bits (115), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 22/44 (50%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           V+  NVN+  E  +  E  R Y  N++ I  + ++   T  L+R
Sbjct: 205 VELSNVNITEELVNSIEDQRQYEINIKLISTAQELDEGTSSLMR 248


>gi|154174960|ref|YP_001407311.1| hypothetical protein CCV52592_2049 [Campylobacter curvus 525.92]
 gi|153793155|gb|EAU00899.2| conserved hypothetical protein [Campylobacter curvus 525.92]
          Length = 533

 Score = 49.1 bits (115), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/121 (14%), Positives = 41/121 (33%), Gaps = 14/121 (11%)

Query: 22  MQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGH 81
           M      IAN   T   P +       ++     +  G  +V     + +    E     
Sbjct: 419 MDDSGNVIANFDNTRTFPVA------KVALYHFQNEQGVSKVGDNLYEATPNSGEAFFYK 472

Query: 82  PVANASGI--------VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             A  +          ++  NV++     ++    + Y A+ ++I  S +M+ T + + +
Sbjct: 473 NKAGQTIYGANIIANKLEMSNVDLGQALTEVIVIQKAYDASAKSITTSDEMIQTAIKMKQ 532

Query: 134 D 134
            
Sbjct: 533 S 533


>gi|325111113|ref|YP_004272181.1| flagellar basal-body rod protein FlgG [Planctomyces brasiliensis
           DSM 5305]
 gi|324971381|gb|ADY62159.1| flagellar basal-body rod protein FlgG [Planctomyces brasiliensis
           DSM 5305]
          Length = 267

 Score = 49.1 bits (115), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/133 (17%), Positives = 41/133 (30%), Gaps = 7/133 (5%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            L  S +I  + +      + I S      +  G +  +   + +   F           
Sbjct: 139 PLEPSINIPPTAVN-----ISITSNGEVWYQEAGSSTMTQAGQIQLARFVNNEGLIQMGE 193

Query: 63  VKKIGVDQSTFVEEFDPGHPVAN--ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
                 D S       PG   A     G ++  NV  + E  ++ +T R    N + +K 
Sbjct: 194 NLYRASDASGVATISIPGQDGAGTLRQGFLETSNVEPVRELVELIKTQRNVELNSEAMKA 253

Query: 121 SHDMMTTTLDLLR 133
              M+     L R
Sbjct: 254 GDQMLQLVNGLRR 266



 Score = 35.2 bits (79), Expect = 2.9,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 21/40 (52%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          + + H A SG+     ++ +I+ N+AN+ TTG       +
Sbjct: 3  VRTLHSAASGMEASLFQLDVIANNLANSGTTGFKRSRAEF 42


>gi|330447903|ref|ZP_08311551.1| conserved hypothetical protein [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328492094|dbj|GAA06048.1| conserved hypothetical protein [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 398

 Score = 49.1 bits (115), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 12/60 (20%), Positives = 23/60 (38%)

Query: 71  STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           +        G      +G ++  NV++  E   +    R Y AN +TI  S  +  +  +
Sbjct: 337 APVNGAPSTGTLGGLVAGALEGSNVDLTSELVSLMTAQRNYQANAKTISTSDKLTQSLFN 396



 Score = 39.5 bits (90), Expect = 0.17,   Method: Composition-based stats.
 Identities = 14/38 (36%), Positives = 19/38 (50%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          S  IA SGL   + ++  IS NIAN  T+G       +
Sbjct: 2  SFDIALSGLDATNVQLNTISNNIANVSTSGFKESRTEF 39


>gi|220930464|ref|YP_002507373.1| hypothetical protein Ccel_3101 [Clostridium cellulolyticum H10]
 gi|220000792|gb|ACL77393.1| protein of unknown function DUF1078 domain protein [Clostridium
           cellulolyticum H10]
          Length = 265

 Score = 49.1 bits (115), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 20/44 (45%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            G  +  NVNV+ E  DM    R Y AN + ++     +   ++
Sbjct: 216 QGFDEQSNVNVIDEMVDMITVMRAYEANQKVLQAQDGTLEKAVN 259



 Score = 37.2 bits (84), Expect = 0.86,   Method: Composition-based stats.
 Identities = 10/91 (10%), Positives = 29/91 (31%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I   + +   +     ++ +I+ N+AN  TT     +  Y+         ++ +     
Sbjct: 1  MIRGLYTSAWSMLANQKKLDVITNNMANVNTTAYKKDTVVYQSFPEILTRRINDTQSPTN 60

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIVKYPN 94
              V       +    +       +V+  +
Sbjct: 61 PSAVVGTMELSSDVGEVYTYYTQGQMVQTGD 91


>gi|315127353|ref|YP_004069356.1| flagellar hook protein E [Pseudoalteromonas sp. SM9913]
 gi|315015867|gb|ADT69205.1| flagellar hook protein E [Pseudoalteromonas sp. SM9913]
          Length = 440

 Score = 49.1 bits (115), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/84 (19%), Positives = 29/84 (34%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
             S  + +   G    KK          E   G      S  ++  NVN+  E  D+   
Sbjct: 356 RFSNSQGLQQVGDTSWKKSLTSGEPIAGEPGSGTLGNINSSALEQSNVNLTNELVDLISA 415

Query: 108 NRLYMANLQTIKQSHDMMTTTLDL 131
            R + AN + ++ +  +    L +
Sbjct: 416 QRNFQANSRALEVNSTIQQNILQI 439



 Score = 40.6 bits (93), Expect = 0.074,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 19/39 (48%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          S +IA +GLA     + + + NIAN  TTG       + 
Sbjct: 2  SFNIALTGLAAAQKDLDVTANNIANVNTTGFKESRAEFA 40


>gi|258621049|ref|ZP_05716083.1| flagellar hook protein [Vibrio mimicus VM573]
 gi|258625277|ref|ZP_05720185.1| flagellar hook protein [Vibrio mimicus VM603]
 gi|262170825|ref|ZP_06038503.1| flagellar hook protein FlgE [Vibrio mimicus MB-451]
 gi|258582450|gb|EEW07291.1| flagellar hook protein [Vibrio mimicus VM603]
 gi|258586437|gb|EEW11152.1| flagellar hook protein [Vibrio mimicus VM573]
 gi|261891901|gb|EEY37887.1| flagellar hook protein FlgE [Vibrio mimicus MB-451]
          Length = 434

 Score = 49.1 bits (115), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/84 (15%), Positives = 35/84 (41%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
            ++ E+ +   GG +             E + G   + ++G ++  N+++  E  D+   
Sbjct: 350 RVANEQGLDKKGGTQWDATQFSGDKIWGESNKGSFGSISNGSLEQSNIDMTQELVDLISA 409

Query: 108 NRLYMANLQTIKQSHDMMTTTLDL 131
            R + AN + ++  + +    L +
Sbjct: 410 QRNFQANSRALEVHNGLQQNILQI 433



 Score = 40.2 bits (92), Expect = 0.097,   Method: Composition-based stats.
 Identities = 12/35 (34%), Positives = 16/35 (45%)

Query: 10 IANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          I+ SGL+     +   S NIANA T G       +
Sbjct: 4  ISLSGLSAAQMDLNTTSNNIANANTFGFKESRAEF 38


>gi|310644367|ref|YP_003949126.1| flagellar basal body rod protein [Paenibacillus polymyxa SC2]
 gi|309249318|gb|ADO58885.1| Flagellar basal body rod protein [Paenibacillus polymyxa SC2]
          Length = 294

 Score = 49.1 bits (115), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 12/71 (16%), Positives = 23/71 (32%)

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           G    ++                V+   G ++  NV+      DM    R Y AN + I+
Sbjct: 219 GNGNFRLNDTDGATARMMTANDTVSVRQGYLEVSNVDAAQSMVDMMAALRAYEANQKVIQ 278

Query: 120 QSHDMMTTTLD 130
                +   ++
Sbjct: 279 FYDKSLDKAVN 289



 Score = 36.8 bits (83), Expect = 1.1,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 28/68 (41%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++   + A +G+  Q  R   +++NIAN  TTG    +   R        +  G+     
Sbjct: 1  MLRGLYTAAAGMMTQQRRHDTVTQNIANMNTTGYKQENSVQRSFPEMLISMTGGNPDNPD 60

Query: 64 KKIGVDQS 71
          + +G   +
Sbjct: 61 RTVGKLNT 68


>gi|163802603|ref|ZP_02196495.1| flagellar hook protein E [Vibrio sp. AND4]
 gi|159173686|gb|EDP58505.1| flagellar hook protein E [Vibrio sp. AND4]
          Length = 437

 Score = 49.1 bits (115), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/84 (15%), Positives = 34/84 (40%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
            +  E+ +   GG +        +    E + G     ++G ++  N+++  E  D+   
Sbjct: 353 RVPNEQGLDKKGGTQWDSTQNSGAKVWGESNKGSFGTISNGTLEQSNIDMTQELVDLISA 412

Query: 108 NRLYMANLQTIKQSHDMMTTTLDL 131
            R + AN + ++  + +    L +
Sbjct: 413 QRNFQANSRALEVDNQLQQNILQI 436



 Score = 35.6 bits (80), Expect = 2.6,   Method: Composition-based stats.
 Identities = 11/35 (31%), Positives = 16/35 (45%)

Query: 10 IANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          ++ SGL+     +   S NIANA T G       +
Sbjct: 4  VSLSGLSSAQLDLNTTSNNIANANTYGFKESRAEF 38


>gi|291288380|ref|YP_003505196.1| fagellar hook-basal body protein [Denitrovibrio acetiphilus DSM
           12809]
 gi|290885540|gb|ADD69240.1| fagellar hook-basal body protein [Denitrovibrio acetiphilus DSM
           12809]
          Length = 252

 Score = 49.1 bits (115), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 21/45 (46%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            +G ++  NVN + E   M E +R +    + I    ++ +  ++
Sbjct: 202 MTGYLEGSNVNPVEEMVKMIEASRGFETYSKIITTFDEIDSKAVN 246



 Score = 40.2 bits (92), Expect = 0.094,   Method: Composition-based stats.
 Identities = 17/54 (31%), Positives = 24/54 (44%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG 57
          +I   + A SG+A+Q  RM IIS N+AN  T G       +     +  E    
Sbjct: 1  MINGLYTATSGMAMQQRRMDIISSNLANLNTVGHKKEVGVFSEYIANASETPDD 54


>gi|195952534|ref|YP_002120824.1| flagellar basal-body rod protein FlgG [Hydrogenobaculum sp.
           Y04AAS1]
 gi|195932146|gb|ACG56846.1| flagellar basal-body rod protein FlgG [Hydrogenobaculum sp.
           Y04AAS1]
          Length = 263

 Score = 49.1 bits (115), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/87 (16%), Positives = 30/87 (34%)

Query: 45  RRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
           +         +   G    ++     +  V            SG  +  NVN++ E  ++
Sbjct: 174 QMANFVNPAGLKRIGNNLFEQTQASGNPIVSNPGTQGLGTLLSGYTEASNVNIVNEMVNL 233

Query: 105 RETNRLYMANLQTIKQSHDMMTTTLDL 131
                 Y  N + I  ++ M++T  +L
Sbjct: 234 IIAENAYQFNSKGITAANTMLSTAANL 260



 Score = 42.9 bits (99), Expect = 0.014,   Method: Composition-based stats.
 Identities = 15/95 (15%), Positives = 33/95 (34%), Gaps = 6/95 (6%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +  +   + +G+  Q   + +IS N+AN  T G        + + +  + +        +
Sbjct: 1  MFRAMWTSAAGMTAQQQNLDVISNNMANVDTVG------YKQLQPVFDDLIYQTVKDPGM 54

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVL 98
          +     Q+    +   G  +    GI    NV   
Sbjct: 55 ETSQNSQNPIGYQLGLGAYIDGTYGIFTQGNVQQT 89


>gi|15639714|ref|NP_219164.1| flagellar hook protein FlgE [Treponema pallidum subsp. pallidum
           str. Nichols]
 gi|189025952|ref|YP_001933724.1| flagellar hook protein FlgE [Treponema pallidum subsp. pallidum
           SS14]
 gi|6015169|sp|O07884|FLGE_TREPA RecName: Full=Flagellar hook protein flgE
 gi|2196893|gb|AAB61251.1| FlgE [Treponema pallidum]
 gi|3323028|gb|AAC65692.1| flagellar hook protein (flgE) [Treponema pallidum subsp. pallidum
           str. Nichols]
 gi|189018527|gb|ACD71145.1| flagellar hook protein [Treponema pallidum subsp. pallidum SS14]
 gi|291060091|gb|ADD72826.1| flagellar hook protein FlgE [Treponema pallidum subsp. pallidum
           str. Chicago]
          Length = 463

 Score = 49.1 bits (115), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/44 (31%), Positives = 24/44 (54%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  NV++  +  DM  T + + A  +TI+ S  M+ T L L R
Sbjct: 420 LEMSNVDLTDQFTDMIITQKGFQAGAKTIQTSDTMLDTVLSLKR 463



 Score = 39.9 bits (91), Expect = 0.13,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 20/42 (47%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S     SG+     RM +I  N+AN  TTG   G   ++
Sbjct: 1  MMRSLFSGVSGMQNHQTRMDVIGNNVANVNTTGFKRGRVNFQ 42


>gi|322432989|ref|YP_004210238.1| flagellar hook-basal body protein [Acidobacterium sp. MP5ACTX9]
 gi|321165216|gb|ADW70920.1| flagellar hook-basal body protein [Acidobacterium sp. MP5ACTX9]
          Length = 412

 Score = 49.1 bits (115), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/127 (18%), Positives = 43/127 (33%), Gaps = 12/127 (9%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           +    IA  G       ++    NI+N    G    +        +  + +  +G    +
Sbjct: 295 LTGYSIAADGT------VEGTFSNISNPVALGQVAVASF------ANTQGLLRTGNNDYQ 342

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
                 +  V   + G       G V+  NV+V  E A M    + Y AN +T+     +
Sbjct: 343 ATVGSGAASVGTAETGGRGVITGGSVESSNVDVAAEFAKMIVAQQAYQANAKTVTTFDQI 402

Query: 125 MTTTLDL 131
              TL +
Sbjct: 403 SQATLQM 409


>gi|229172400|ref|ZP_04299959.1| Flagellar hook protein FlgE [Bacillus cereus MM3]
 gi|228610871|gb|EEK68134.1| Flagellar hook protein FlgE [Bacillus cereus MM3]
          Length = 441

 Score = 49.1 bits (115), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 15/79 (18%), Positives = 29/79 (36%)

Query: 55  MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
           +  SG              +             G  +  NV++ VE  D+    R +  N
Sbjct: 363 LMKSGNGNYIATPSSGIPAIGVAGENGAGNVRGGAKESSNVDLSVEFVDLMLYQRGFQGN 422

Query: 115 LQTIKQSHDMMTTTLDLLR 133
            + IK S +++   ++L+R
Sbjct: 423 AKVIKVSDEVLNEVVNLIR 441



 Score = 38.7 bits (88), Expect = 0.27,   Method: Composition-based stats.
 Identities = 14/103 (13%), Positives = 37/103 (35%), Gaps = 7/103 (6%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +I + + + +G++     + + S NIANA+T G       Y+++   F+++++ +     
Sbjct: 1   MIKALYTSITGMSATQNALSVTSNNIANAQTAG-------YKKQKAIFDDLLYNNTVGSR 53

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
                  +      +       A+            +     E
Sbjct: 54  GDGSYAGTNPKSIGNGLKFSGTATDFSDGSITLTGEKMETAIE 96


>gi|262276416|ref|ZP_06054225.1| flagellar basal-body rod protein FlgF [Grimontia hollisae CIP
           101886]
 gi|262220224|gb|EEY71540.1| flagellar basal-body rod protein FlgF [Grimontia hollisae CIP
           101886]
          Length = 249

 Score = 49.1 bits (115), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 28/67 (41%)

Query: 67  GVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
                     F+    V+  +G ++  NVN + E   + +  R +   ++ +K + +M  
Sbjct: 181 VFKPVNPGTIFEADAGVSLLTGALEGSNVNPINEMTGLIDLQRHFEMQVKLMKTAEEMDQ 240

Query: 127 TTLDLLR 133
            +  LLR
Sbjct: 241 ASNSLLR 247


>gi|170725955|ref|YP_001759981.1| flagellar hook protein FlgE [Shewanella woodyi ATCC 51908]
 gi|169811302|gb|ACA85886.1| flagellar basal body FlaE domain protein [Shewanella woodyi ATCC
           51908]
          Length = 453

 Score = 49.1 bits (115), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/113 (17%), Positives = 45/113 (39%), Gaps = 1/113 (0%)

Query: 20  ARMQIISENIANAR-TTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFD 78
             +++ ++ + NA  + G T           + E+ +   G    K           E +
Sbjct: 340 TNVEVGADGLINASYSNGSTVPLARVALARFANEQGLTQVGNTSWKASLDSGLALAGEAN 399

Query: 79  PGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G   +  S  ++  NV++  E  D+    R + AN +T++ ++ +  T L +
Sbjct: 400 SGTFGSIRSSALEQSNVDLTTELVDLISAQRNFQANSRTLEVNNTLQQTVLQI 452



 Score = 40.2 bits (92), Expect = 0.094,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 17/39 (43%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          S +IA SG++     +   + NIAN  + G       + 
Sbjct: 2  SFNIALSGISAAQKDLNTTANNIANVNSIGFKESRAEFA 40


>gi|118581835|ref|YP_903085.1| hypothetical protein Ppro_3435 [Pelobacter propionicus DSM 2379]
 gi|118504545|gb|ABL01028.1| protein of unknown function DUF1078 domain protein [Pelobacter
           propionicus DSM 2379]
          Length = 259

 Score = 49.1 bits (115), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/107 (19%), Positives = 37/107 (34%), Gaps = 7/107 (6%)

Query: 30  ANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGI 89
           ANA  T  T         TI     +  +GG          +                  
Sbjct: 157 ANATQTYGTKIGVA----TIPNVGALQKAGGTLYDVAASVAAGSGAITPSAADGVVNKIY 212

Query: 90  ---VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
              ++  NV++  +   + +T + Y AN +TI  + +M    L+L+R
Sbjct: 213 SNSLEASNVDMASQFVRLIQTQQAYTANSKTITTADEMTDVVLNLIR 259


>gi|332704840|ref|ZP_08424928.1| flagellar basal body rod protein [Desulfovibrio africanus str.
           Walvis Bay]
 gi|332554989|gb|EGJ52033.1| flagellar basal body rod protein [Desulfovibrio africanus str.
           Walvis Bay]
          Length = 126

 Score = 49.1 bits (115), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/126 (18%), Positives = 46/126 (36%), Gaps = 4/126 (3%)

Query: 8   AHIANS--GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
            +I+ S   L   + ++ + + N+AN  T            +     + +  +   R   
Sbjct: 1   MNISPSLQALDAVAIQLMVTANNVANVNTEEFRAARV--DLEDGYQGQGVRVADIRRRSD 58

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
            G       E          A G V+  N ++ VE   +      Y ANL+ ++ +H+M 
Sbjct: 59  QGPHIPDNPERLAAAGYATAAEGWVQGSNTDLAVELTRLMREEATYTANLRVMRTAHEMA 118

Query: 126 TTTLDL 131
              ++L
Sbjct: 119 GNIIEL 124


>gi|229592130|ref|YP_002874249.1| flagellar hook protein FlgE [Pseudomonas fluorescens SBW25]
 gi|229363996|emb|CAY51545.1| putative flagellar hook protein [Pseudomonas fluorescens SBW25]
          Length = 434

 Score = 49.1 bits (115), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/83 (20%), Positives = 34/83 (40%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            + E+ +  SGG   ++         +    G   +  +  ++  NVN+  E  D+ +  
Sbjct: 351 FNNEQGLQPSGGTTWRETFASGQPGYDTPQAGTLGSIVANSLENSNVNLTNELVDLIKAQ 410

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
             Y AN +TI     +M T + +
Sbjct: 411 SNYQANAKTISTQSTIMQTIIQM 433



 Score = 34.5 bits (77), Expect = 5.7,   Method: Composition-based stats.
 Identities = 12/38 (31%), Positives = 18/38 (47%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          S +I  SGL   + ++ +   NIAN  TTG       +
Sbjct: 2  SFNIGLSGLYAANKQLDVTGNNIANVATTGFKSSRAEF 39


>gi|213028802|ref|ZP_03343249.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Typhi str. 404ty]
          Length = 293

 Score = 49.1 bits (115), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 26/51 (50%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +     +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 242 NFGKLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 292


>gi|269792758|ref|YP_003317662.1| hypothetical protein Taci_1148 [Thermanaerovibrio acidaminovorans
           DSM 6589]
 gi|269100393|gb|ACZ19380.1| protein of unknown function DUF1078 domain protein
           [Thermanaerovibrio acidaminovorans DSM 6589]
          Length = 263

 Score = 49.1 bits (115), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 26/62 (41%), Gaps = 2/62 (3%)

Query: 71  STFVEEFDPGHPVANAS--GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
           +   E   P    A     G ++  NVNV+ E   M E NR Y A  +T+    ++ +  
Sbjct: 196 AETQESGAPEDVEAPKLAVGFLERSNVNVVEEMTKMIEANRAYEAAAKTVTIQDELSSRL 255

Query: 129 LD 130
            +
Sbjct: 256 SN 257



 Score = 35.2 bits (79), Expect = 3.3,   Method: Composition-based stats.
 Identities = 11/62 (17%), Positives = 23/62 (37%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +    +   S + VQ   + ++  N+AN  T+G        +       + +  S    V
Sbjct: 1  MFRGIYAGTSAMLVQEKMLDVVGNNLANVDTSGFRARIAVNKSFPEELMDRIERSMDPVV 60

Query: 64 KK 65
          K+
Sbjct: 61 KE 62


>gi|253681928|ref|ZP_04862725.1| flagellar hook-associated protein FlgK [Clostridium botulinum D
          str. 1873]
 gi|253561640|gb|EES91092.1| flagellar hook-associated protein FlgK [Clostridium botulinum D
          str. 1873]
          Length = 686

 Score = 49.1 bits (115), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/78 (25%), Positives = 28/78 (35%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  L A+ ++   GL  Q   + + S NIAN+ T G T                M+   G
Sbjct: 1  MSGLFATLNVGKRGLYAQQGALDVTSHNIANSNTEGYTRQRAIMETTRPFGMPSMNCQIG 60

Query: 61 VRVKKIGVDQSTFVEEFD 78
                GV+ S      D
Sbjct: 61 PGQIGTGVEISKIQRVRD 78



 Score = 45.2 bits (105), Expect = 0.003,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 20/42 (47%), Gaps = 1/42 (2%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD-LLR 133
             V++  E A++ +    Y AN + I  +  ++   ++ L R
Sbjct: 645 SGVSLNEEMANIVQYQHAYQANAKIIATTDQLLDVVINGLKR 686


>gi|170694392|ref|ZP_02885546.1| protein of unknown function DUF1078 domain protein [Burkholderia
           graminis C4D1M]
 gi|170140815|gb|EDT08989.1| protein of unknown function DUF1078 domain protein [Burkholderia
           graminis C4D1M]
          Length = 502

 Score = 49.1 bits (115), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/83 (21%), Positives = 31/83 (37%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            S +  +   G    ++        +      +      G V+  NV++  E  D+    
Sbjct: 420 FSNQNGLVNLGNNEFQQTSQSGVAQISAPGSTNHGVLQGGAVENSNVDLTSELVDLITAQ 479

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y AN QTIK    +  T ++L
Sbjct: 480 RNYQANAQTIKTQQTVDQTLINL 502


>gi|297585403|ref|YP_003701183.1| fagellar hook-basal body protein [Bacillus selenitireducens MLS10]
 gi|297143860|gb|ADI00618.1| fagellar hook-basal body protein [Bacillus selenitireducens MLS10]
          Length = 277

 Score = 49.1 bits (115), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/108 (12%), Positives = 31/108 (28%), Gaps = 5/108 (4%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGS----GGVRVKKIGVDQSTFVEEFDPGHPVANA 86
           N      T  +D      I    +         G    +   D++      +        
Sbjct: 168 NQNGEIFTDDADEVFLGQIDIMLIPDPGLLVKEGSGFLRYDGDEAIASAIGNDDVLYQLQ 227

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD-LLR 133
            G ++  NV+       M    R + AN + ++     +   ++ + R
Sbjct: 228 QGYLERSNVDAGQTMTQMMAALRNFEANQKVLQAYDQSLERAVNDIGR 275



 Score = 34.1 bits (76), Expect = 7.4,   Method: Composition-based stats.
 Identities = 12/62 (19%), Positives = 23/62 (37%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++   + A +G+  Q    +++S NIAN  T G        R       + M        
Sbjct: 1  MLRGLYTAGAGMISQQRNQEMLSNNIANVNTPGFKADQGSLRTFPNMLIQAMGTDHQFPG 60

Query: 64 KK 65
          ++
Sbjct: 61 RR 62


>gi|325295398|ref|YP_004281912.1| fagellar hook-basal body protein [Desulfurobacterium
           thermolithotrophum DSM 11699]
 gi|325065846|gb|ADY73853.1| fagellar hook-basal body protein [Desulfurobacterium
           thermolithotrophum DSM 11699]
          Length = 238

 Score = 49.1 bits (115), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 15/105 (14%), Positives = 34/105 (32%), Gaps = 4/105 (3%)

Query: 29  IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASG 88
           I N        G      K ++  ++++      VK IG           P        G
Sbjct: 137 IKNEPIHITEDGVVYQGNKKVAVLKIVNFQS---VKPIGDSYYAGNGTPLPTEAK-VLQG 192

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NV+ + E  ++    R +      I+    +   + ++ +
Sbjct: 193 FLESSNVDPVKEMVELINAQRRFEIYGNLIRGLDQLNLKSNEIGK 237


>gi|32477362|ref|NP_870356.1| flagellar hook basal body protein flgG [Rhodopirellula baltica SH
           1]
 gi|32447913|emb|CAD77433.1| flagellar hook basal body protein flgG [Rhodopirellula baltica SH
           1]
 gi|327537337|gb|EGF24070.1| flagellar basal-body rod protein FlgG [Rhodopirellula baltica WH47]
          Length = 268

 Score = 49.1 bits (115), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 26/69 (37%), Gaps = 2/69 (2%)

Query: 67  GVDQSTFVEEFDPGHPVAN--ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
             D S   +  +PG         G ++  NV  + E  D+  T R +  N Q ++    +
Sbjct: 199 ETDASGPEQINNPGTDGMGVLRQGNLEASNVEPVQELIDLITTQRAFELNSQAVQAGDQV 258

Query: 125 MTTTLDLLR 133
           M     L R
Sbjct: 259 MQNISQLRR 267



 Score = 37.5 bits (85), Expect = 0.62,   Method: Composition-based stats.
 Identities = 9/40 (22%), Positives = 20/40 (50%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          + + + A +G+     ++ +I+ N+AN  TTG       +
Sbjct: 3  VQTLYTAATGMEAMQTKLDVIANNLANINTTGFKKDRANF 42


>gi|50954410|ref|YP_061698.1| flagellar hook protein [Leifsonia xyli subsp. xyli str. CTCB07]
 gi|50950892|gb|AAT88593.1| flagellar hook protein [Leifsonia xyli subsp. xyli str. CTCB07]
          Length = 390

 Score = 49.1 bits (115), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 10/63 (15%), Positives = 23/63 (36%)

Query: 70  QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
            S   +            G  +  NV++  E  ++  + R + A+ + I  S +++    
Sbjct: 326 DSGIPQVAADSGTGTITVGAYEGSNVDLGREFTNLIVSQRAFQASARVITTSDEILQELT 385

Query: 130 DLL 132
            L 
Sbjct: 386 QLK 388



 Score = 37.2 bits (84), Expect = 0.80,   Method: Composition-based stats.
 Identities = 10/33 (30%), Positives = 15/33 (45%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ S      GL  Q   + + + NIAN  T G
Sbjct: 1  MLRSLDSGVFGLQAQQTMLDVTANNIANVNTAG 33


>gi|124516714|gb|EAY58222.1| putative flagellar basal body rod protein [Leptospirillum rubarum]
          Length = 267

 Score = 48.7 bits (114), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 33/85 (38%)

Query: 46  RKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
           R       V+  +G   + K+G        +  P       +G  +  NVN   E   M 
Sbjct: 177 RVMGRLAVVVPENGTGHLAKVGDGLFMADGKTAPVADPDVLAGGFESSNVNGTFEMVRMI 236

Query: 106 ETNRLYMANLQTIKQSHDMMTTTLD 130
           E  R +  +L+ ++  +++   T++
Sbjct: 237 EAMRSFETHLKALQTLNELTRRTVN 261



 Score = 36.4 bits (82), Expect = 1.2,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 20/63 (31%), Gaps = 3/63 (4%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSD---PYRRKTISFEEVMHGSGGVRVKKIGVD 69
          SG   Q   M +++ N+AN  T G          Y        +      G R+   G  
Sbjct: 10 SGAQAQEQLMDVLTNNLANVNTPGFKRDRVTFRTYLPHREWLHKTPSDQPGFRMTPWGEF 69

Query: 70 QST 72
           + 
Sbjct: 70 PTP 72


>gi|254503336|ref|ZP_05115487.1| Flagellar basal body protein FlaE [Labrenzia alexandrii DFL-11]
 gi|222439407|gb|EEE46086.1| Flagellar basal body protein FlaE [Labrenzia alexandrii DFL-11]
          Length = 421

 Score = 48.7 bits (114), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 15/44 (34%), Positives = 24/44 (54%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  NV++  E   M E+ R Y AN Q  K   D+M   ++L+R
Sbjct: 378 LEGSNVDLANELTSMIESQRTYTANSQVFKAGSDLMQELVNLVR 421



 Score = 41.0 bits (94), Expect = 0.048,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 29/58 (50%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
               SG+  QS+++  +++NIAN+ TTG       +  + ++     + SGGV+   
Sbjct: 1  MRTGVSGMNAQSSKLGAVADNIANSSTTGYKRAETEFASQVLAQGGGSYNSGGVQAHT 58


>gi|319790435|ref|YP_004152068.1| flagellar hook-basal body protein [Thermovibrio ammonificans HB-1]
 gi|317114937|gb|ADU97427.1| flagellar hook-basal body protein [Thermovibrio ammonificans HB-1]
          Length = 238

 Score = 48.7 bits (114), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/116 (15%), Positives = 39/116 (33%), Gaps = 9/116 (7%)

Query: 22  MQIISENIA---NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFD 78
           + I  + IA   N + T    G      + +   +++  +    V       S +     
Sbjct: 127 LDISGKEIALSGNGKVTVTPDGLVFEGDRQVGVLKIVDFAKVKPVG-----NSYYQGVGA 181

Query: 79  PGHPVANA-SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           P    A    G ++  NVN + E  ++ E  R +       +    +   T ++ +
Sbjct: 182 PTATDAEVLQGFLEGSNVNPVKEMVNLIEAQRRFEIYGNLTRALAQVDLRTNEIGK 237


>gi|89072315|ref|ZP_01158894.1| flagellar hook protein [Photobacterium sp. SKA34]
 gi|89051847|gb|EAR57299.1| flagellar hook protein [Photobacterium sp. SKA34]
          Length = 398

 Score = 48.7 bits (114), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 12/60 (20%), Positives = 23/60 (38%)

Query: 71  STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           +        G      +G ++  NV++  E   +    R Y AN +TI  S  +  +  +
Sbjct: 337 APVNGAPSTGTLGGLVAGALEGSNVDLTSELVSLMTAQRNYQANAKTISTSDKLTQSLFN 396



 Score = 39.1 bits (89), Expect = 0.20,   Method: Composition-based stats.
 Identities = 14/38 (36%), Positives = 19/38 (50%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          S  IA SGL   + ++  IS NIAN  T+G       +
Sbjct: 2  SFDIALSGLDATNIQLNTISNNIANVSTSGFKESRTEF 39


>gi|147678401|ref|YP_001212616.1| flagellar basal body rod protein [Pelotomaculum thermopropionicum
           SI]
 gi|146274498|dbj|BAF60247.1| flagellar basal body rod protein [Pelotomaculum thermopropionicum
           SI]
          Length = 256

 Score = 48.7 bits (114), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/102 (12%), Positives = 29/102 (28%)

Query: 32  ARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVK 91
           A   G    +        S    +  +G                            G ++
Sbjct: 155 AEKDGSVIDAGQITLYRFSSMAALKPAGSFHFYLDEEAGEAIPGTPGSEGFGVIRQGYLE 214

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             NV++  E   + E   +Y  N ++++   +M     +L +
Sbjct: 215 TSNVDLTGEITGLIEAQTVYGFNARSVRIVDEMWGMANNLRK 256



 Score = 44.1 bits (102), Expect = 0.007,   Method: Composition-based stats.
 Identities = 14/83 (16%), Positives = 29/83 (34%), Gaps = 7/83 (8%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ +   A +GL  Q  R+  I+ ++AN    G       Y+R    F E++      + 
Sbjct: 1  MLKALSSAVTGLNAQRTRVDAIAVDLANIAAAG-------YKRNRTRFAELVSQEIEKQG 53

Query: 64 KKIGVDQSTFVEEFDPGHPVANA 86
            +  +              A+ 
Sbjct: 54 IPVAAEGRPARAGSGVRAESADK 76


>gi|166712062|ref|ZP_02243269.1| flagellar hook protein FlgE [Xanthomonas oryzae pv. oryzicola
           BLS256]
          Length = 407

 Score = 48.7 bits (114), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 11/83 (13%), Positives = 27/83 (32%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
               + +   G     +     +      +        SG ++   V++  +  +M    
Sbjct: 324 FVNPQGLQSQGNNMWAESYTSGAARTGAPNTSDLGQIESGSLESSTVDLTEQLVNMIVAQ 383

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R + AN Q I     +  T +++
Sbjct: 384 RNFQANSQMISTQDQVTQTIINI 406



 Score = 35.2 bits (79), Expect = 2.7,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 20/39 (51%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          + + + SG++  +A + + S NIAN  TTG       + 
Sbjct: 2  AFNTSLSGISAANADLNVTSNNIANVNTTGFKESRAEFA 40


>gi|149191153|ref|ZP_01869411.1| flagellar hook protein E [Vibrio shilonii AK1]
 gi|148834991|gb|EDL51970.1| flagellar hook protein E [Vibrio shilonii AK1]
          Length = 408

 Score = 48.7 bits (114), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 20/45 (44%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            SG ++  NV++  E   +    R Y AN ++I  S  +     +
Sbjct: 362 TSGALEGSNVDLTSELVALMTAQRNYQANTKSISTSDQLTQALFN 406



 Score = 38.7 bits (88), Expect = 0.25,   Method: Composition-based stats.
 Identities = 15/39 (38%), Positives = 19/39 (48%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          S  IA SGL   ++ +  IS NIAN  TTG       + 
Sbjct: 2  SFSIALSGLNASNSELNTISNNIANVSTTGFKESRTEFA 40


>gi|313681188|ref|YP_004058926.1| flagellar hook protein flge [Sulfuricurvum kujiense DSM 16994]
 gi|313154048|gb|ADR32726.1| flagellar hook protein FlgE [Sulfuricurvum kujiense DSM 16994]
          Length = 758

 Score = 48.7 bits (114), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/88 (18%), Positives = 29/88 (32%)

Query: 46  RKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
               +  E +   GG    +        +            S  ++  NV++      + 
Sbjct: 671 MAKFTNNEGLVSDGGNVYLQSANSGDPIIGTAATAGRGFMQSSSLEASNVDLSKSLTQLI 730

Query: 106 ETNRLYMANLQTIKQSHDMMTTTLDLLR 133
              R Y AN +TI  S  ++ T L + R
Sbjct: 731 IIQRGYQANGKTITTSDTLLETLLGIKR 758



 Score = 34.1 bits (76), Expect = 5.9,   Method: Composition-based stats.
 Identities = 12/58 (20%), Positives = 19/58 (32%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
          ++ S     +GL      M + S NIAN  T G       +        ++     G 
Sbjct: 1  MLRSLFAGVTGLQAHQIAMDVESNNIANVNTIGYKYSRANFSDLLAQTSQIATAPQGD 58


>gi|297183135|gb|ADI19278.1| flagellar basal body rod protein [uncultured delta proteobacterium
           HF0200_39L23]
          Length = 258

 Score = 48.7 bits (114), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/86 (16%), Positives = 29/86 (33%), Gaps = 5/86 (5%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
               ++ +   G      I  D         P   +    G+++  NVN ++E + M   
Sbjct: 176 RFRNQDQLQKLGNHFYAPIRSDDVPI-----PSREILVRQGMLEQSNVNTVMEMSRMVNA 230

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R Y    + I    ++    + + R
Sbjct: 231 TRSYEMVQKAIMNLDNIDEKAISISR 256


>gi|210135277|ref|YP_002301716.1| flagellar hook-associated protein FlgK [Helicobacter pylori P12]
 gi|210133245|gb|ACJ08236.1| flagellar hook-associated protein 1 [Helicobacter pylori P12]
          Length = 606

 Score = 48.7 bits (114), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/119 (17%), Positives = 35/119 (29%), Gaps = 4/119 (3%)

Query: 19  SARMQIISEN--IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEE 76
              +  I+ N  +AN          D Y  K       +         KI  D       
Sbjct: 488 RPWLAPINGNFDVANMMQQLQYDSVDFYNDKFDIKPMKISEFYQFLTGKINTDAEKSGRI 547

Query: 77  FDPGHPV--ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            D    +        +    V+V  E  ++ +    Y AN + I     M+ T L + +
Sbjct: 548 LDTKKSMLETIKKEQLSISQVSVDEEMLNLIKFQSGYAANAKVITAIDRMIDTLLGIKQ 606



 Score = 44.9 bits (104), Expect = 0.004,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 40/111 (36%), Gaps = 9/111 (8%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M  +++S + + +GL    + + +   NI+NA         + Y R+ +  +       G
Sbjct: 1   MGGILSSLNTSYTGLQAHQSMVDVTGNNISNASD-------EFYSRQRVIAKPQAAYMYG 53

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
            +   +GVD        D            +  N     E + ++E +  +
Sbjct: 54  TKNVNMGVDVEAIERVHDEFVFARYTKANYE--NTYYDTEFSHLKEASAYF 102


>gi|21672604|ref|NP_660671.1| flagellar hook protein FlgE [Buchnera aphidicola str. Sg
           (Schizaphis graminum)]
 gi|25008456|sp|Q8K9K6|FLGE_BUCAP RecName: Full=Flagellar hook protein flgE
 gi|21623235|gb|AAM67882.1| flagellar hook protein FlgE [Buchnera aphidicola str. Sg
           (Schizaphis graminum)]
          Length = 409

 Score = 48.7 bits (114), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 12/88 (13%), Positives = 27/88 (30%)

Query: 45  RRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
                   E +    G             +         +  +  ++  NV++  E  +M
Sbjct: 322 FLAKFINPEKLKPESGSIWSATHESGQEKIGAAGDQGFGSLYTKFLESSNVDLNKELINM 381

Query: 105 RETNRLYMANLQTIKQSHDMMTTTLDLL 132
               R Y ++ Q  K    ++ T ++L 
Sbjct: 382 IIAQRNYQSSAQAFKTEDRIINTLVNLK 409


>gi|253702433|ref|YP_003023622.1| flagellar basal-body rod protein FlgF [Geobacter sp. M21]
 gi|251777283|gb|ACT19864.1| flagellar basal-body rod protein FlgF [Geobacter sp. M21]
          Length = 237

 Score = 48.7 bits (114), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 1/49 (2%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD-LLR 133
             G ++  NV V+VE A M E +R +    + +K   DM    ++ L R
Sbjct: 188 KQGYLESSNVKVVVEMARMIEASRYFETCTKAVKSYDDMTAKAVNELGR 236



 Score = 34.8 bits (78), Expect = 4.2,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 2/39 (5%)

Query: 4  LIASAHIANSG-LAVQSARMQIISENIANARTTGDTPGS 41
          + +  + A SG L+ Q  R+ +IS N+AN+ T G     
Sbjct: 1  MNSGIYAALSGNLSAQR-RLDVISNNLANSNTAGFKADQ 38


>gi|149908759|ref|ZP_01897420.1| flagellar hook protein [Moritella sp. PE36]
 gi|149808301|gb|EDM68240.1| flagellar hook protein [Moritella sp. PE36]
          Length = 437

 Score = 48.7 bits (114), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 23/60 (38%)

Query: 71  STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           +  V     G   +  SG  +  NV++  E   +    R Y AN +TI  +  M     +
Sbjct: 376 APTVGLPSSGTLGSLTSGAYEGSNVDLTGELVSLMTAQRNYQANSKTISAAEKMTQVLFN 435



 Score = 34.5 bits (77), Expect = 4.9,   Method: Composition-based stats.
 Identities = 14/38 (36%), Positives = 21/38 (55%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          S  I  SGL   + ++ +IS+NIAN  T+G   G   +
Sbjct: 2  SYSIGLSGLRSTNEQLNVISQNIANVNTSGFKSGRAEF 39


>gi|91785634|ref|YP_560840.1| putative flagellar hook protein FlgE [Burkholderia xenovorans
           LB400]
 gi|91689588|gb|ABE32788.1| putative flagellar hook protein FlgE [Burkholderia xenovorans
           LB400]
          Length = 503

 Score = 48.7 bits (114), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 18/83 (21%), Positives = 31/83 (37%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            S +  +   G    ++        +      +      G V+  NV++  E  D+    
Sbjct: 421 FSNQNGLVNLGNNEFQQTSQSGVAQISAPGSTNHGVLQGGAVENSNVDLTSELVDLITAQ 480

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y AN QTIK    +  T ++L
Sbjct: 481 RNYQANAQTIKTQQTVDQTLINL 503


>gi|317011118|gb|ADU84865.1| flagellar hook protein FlgE [Helicobacter pylori SouthAfrica7]
          Length = 605

 Score = 48.7 bits (114), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 17/45 (37%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NVN      ++    R Y  N +      DM+   + L +
Sbjct: 561 YLETSNVNAGNALTNLILMQRGYSMNAKAFGAGDDMIKEAISLKK 605


>gi|168186143|ref|ZP_02620778.1| flagellar basal-body rod protein FlgG [Clostridium botulinum C str.
           Eklund]
 gi|169295828|gb|EDS77961.1| flagellar basal-body rod protein FlgG [Clostridium botulinum C str.
           Eklund]
          Length = 257

 Score = 48.7 bits (114), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 14/84 (16%), Positives = 27/84 (32%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
            I     +  +    +                   V+   G  +  NV++  E AD+  T
Sbjct: 171 RIPIYTSIGDNSMKSIGDNLYVPENANTIVVQNEDVSLLQGFTEQSNVDLGKEMADLIIT 230

Query: 108 NRLYMANLQTIKQSHDMMTTTLDL 131
            R +  N   +K + +M     +L
Sbjct: 231 QRAFQLNSSALKTADEMWGMANNL 254



 Score = 37.5 bits (85), Expect = 0.55,   Method: Composition-based stats.
 Identities = 11/35 (31%), Positives = 20/35 (57%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDT 38
          ++ S   + SG++ +  ++  IS N+ANA T G  
Sbjct: 1  MLRSIWNSRSGMSAEMEKLNAISNNMANATTVGYK 35


>gi|58582195|ref|YP_201211.1| flagellar hook protein FlgE [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|84624088|ref|YP_451460.1| flagellar hook protein FlgE [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|58426789|gb|AAW75826.1| flagellar biosynthesis hook protein [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|84368028|dbj|BAE69186.1| flagellar biosynthesis hook protein [Xanthomonas oryzae pv. oryzae
           MAFF 311018]
          Length = 407

 Score = 48.7 bits (114), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 11/83 (13%), Positives = 26/83 (31%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
               + +   G     +     +               SG ++   V++  +  +M    
Sbjct: 324 FVNPQGLQSQGNNMWAESYTSGAARTSAPGTSDLGQIESGSLESSTVDLTEQLVNMIVAQ 383

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R + AN Q I     +  T +++
Sbjct: 384 RNFQANSQMISTQDQVTQTIINI 406



 Score = 35.6 bits (80), Expect = 2.5,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 20/39 (51%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          + + + SG++  +A + + S NIAN  TTG       + 
Sbjct: 2  AFNTSLSGISAANADLNVTSNNIANVNTTGFKESRAEFA 40


>gi|148546706|ref|YP_001266808.1| flagellar basal body FlaE domain-containing protein [Pseudomonas
           putida F1]
 gi|148510764|gb|ABQ77624.1| flagellar basal body FlaE domain protein [Pseudomonas putida F1]
          Length = 584

 Score = 48.7 bits (114), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/98 (19%), Positives = 37/98 (37%)

Query: 34  TTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
           + G +         + + E+ +   G  R  +        ++    G   A  S  ++  
Sbjct: 486 SNGQSRAIGQVALASFANEQGLQQIGSTRWTETYNSGIPGIDSPKTGTLGAIESNSLEGS 545

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           NVN+  E  D+ +    Y AN +TI     +M T + +
Sbjct: 546 NVNLTQELVDLIKAQSYYQANAKTISTESTVMQTIIQM 583



 Score = 35.6 bits (80), Expect = 2.2,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 18/39 (46%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          S +I  SGL   + ++ +   NIAN  TTG       + 
Sbjct: 2  SFNIGLSGLYAANKQLDVTGNNIANVNTTGFKASRAEFA 40


>gi|197104253|ref|YP_002129630.1| flagellar hook protein FlgE [Phenylobacterium zucineum HLK1]
 gi|196477673|gb|ACG77201.1| flagellar hook protein FlgE [Phenylobacterium zucineum HLK1]
          Length = 452

 Score = 48.7 bits (114), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 13/86 (15%), Positives = 31/86 (36%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
           T    + +    G   +         V+E   G     +   ++   V++  E   +  T
Sbjct: 367 TFPNPDALAAVSGNAYRPTIPAGEMTVKEAGIGGAGKISPSSLEASTVDLSAEFTGLIAT 426

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            + Y A+ + I  +  M+   +++ R
Sbjct: 427 QKAYSASSKIITTADQMLEELINIKR 452


>gi|83647172|ref|YP_435607.1| flagellar basal body rod protein FlgF [Hahella chejuensis KCTC
           2396]
 gi|83635215|gb|ABC31182.1| Flagellar basal body rod protein [Hahella chejuensis KCTC 2396]
          Length = 248

 Score = 48.7 bits (114), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/98 (16%), Positives = 33/98 (33%), Gaps = 2/98 (2%)

Query: 36  GDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNV 95
           G+        R  +          G  V  +   +        P   V   SG ++  NV
Sbjct: 151 GNPDEIQEVDRIRLVNPPAEDLEKG--VDGLIHLKPDVPGPALPDGLVRLESGYLESSNV 208

Query: 96  NVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           N + E  ++   +R +   ++ ++ + D       LL+
Sbjct: 209 NAVEEMTEILSLSRQFELQVKVMRAADDNSEAAARLLQ 246


>gi|153831673|ref|ZP_01984340.1| flagellar hook protein FlgE [Vibrio harveyi HY01]
 gi|269960116|ref|ZP_06174492.1| Flagellar hook protein flgE [Vibrio harveyi 1DA3]
 gi|148872183|gb|EDL71000.1| flagellar hook protein FlgE [Vibrio harveyi HY01]
 gi|269835087|gb|EEZ89170.1| Flagellar hook protein flgE [Vibrio harveyi 1DA3]
          Length = 399

 Score = 48.7 bits (114), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/105 (15%), Positives = 31/105 (29%), Gaps = 5/105 (4%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQS-----TFVEEFDPGHPVAN 85
           N              +  +   +  +  G  +V      QS       +     G     
Sbjct: 293 NGMVYATYTNGQSQLQGQVVLADFANTQGLSKVSGTAWTQSFSSGAPIMGVPGTGTLGDL 352

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             G ++  NV++  E   +    R Y AN +TI  +  +     +
Sbjct: 353 TPGALEGSNVDLTSELVALMTAQRNYQANAKTISTNDKLTQALFN 397



 Score = 40.2 bits (92), Expect = 0.100,   Method: Composition-based stats.
 Identities = 16/40 (40%), Positives = 20/40 (50%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR 46
          S +IA SGL   +  +  IS NIANA T G   G   +  
Sbjct: 2  SFNIALSGLDATNTELNTISHNIANASTYGFKGGRTEFAA 41


>gi|21748188|emb|CAD41958.1| flagellar hook protein [Pseudomonas fluorescens]
          Length = 181

 Score = 48.7 bits (114), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 17/83 (20%), Positives = 35/83 (42%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            + E+ +  +GG   K+         +  + G   +  +  ++  NVN+  E  D+ +  
Sbjct: 98  FNNEQGLQPAGGTTWKETFASGQPGYDAPESGTLGSIKASSLENSNVNLTNELVDLIKAQ 157

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
             Y AN +TI     +M T + +
Sbjct: 158 SNYQANAKTISTQSTIMQTIIQM 180


>gi|330953723|gb|EGH53983.1| flagellar hook protein FlgE [Pseudomonas syringae Cit 7]
          Length = 581

 Score = 48.7 bits (114), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 17/41 (41%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           ++  NV +  E   + +    Y AN + I     +M T + 
Sbjct: 539 LEGSNVVLADELIALIQAQTAYQANSKAISTEVTLMQTLIQ 579



 Score = 34.8 bits (78), Expect = 4.2,   Method: Composition-based stats.
 Identities = 11/36 (30%), Positives = 17/36 (47%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSD 42
          S + A SG+   + R+++   NIAN  T G      
Sbjct: 2  SFNTAISGIQAANKRLEVAGNNIANVGTLGFKSSRA 37


>gi|188576756|ref|YP_001913685.1| flagellar hook protein FlgE [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|188576947|ref|YP_001913876.1| flagellar hook protein FlgE [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|188521208|gb|ACD59153.1| flagellar biosynthesis hook protein [Xanthomonas oryzae pv. oryzae
           PXO99A]
 gi|188521399|gb|ACD59344.1| flagellar biosynthesis hook protein [Xanthomonas oryzae pv. oryzae
           PXO99A]
          Length = 407

 Score = 48.7 bits (114), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 11/83 (13%), Positives = 27/83 (32%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
               + +   G     +     +      +        SG ++   V++  +  +M    
Sbjct: 324 FVNPQGLQSQGNNVWAESYTSGAARTSAPNTSDLGQIESGSLESSTVDLTEQLVNMIVAQ 383

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R + AN Q I     +  T +++
Sbjct: 384 RNFQANSQMISTQDQVTQTIINI 406



 Score = 35.6 bits (80), Expect = 2.5,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 20/39 (51%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          + + + SG++  +A + + S NIAN  TTG       + 
Sbjct: 2  AFNTSLSGISAANADLNVTSNNIANVNTTGFKESRAEFA 40


>gi|156976141|ref|YP_001447047.1| flagellar hook protein FlgE [Vibrio harveyi ATCC BAA-1116]
 gi|156527735|gb|ABU72820.1| hypothetical protein VIBHAR_04912 [Vibrio harveyi ATCC BAA-1116]
          Length = 399

 Score = 48.7 bits (114), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/105 (15%), Positives = 31/105 (29%), Gaps = 5/105 (4%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQS-----TFVEEFDPGHPVAN 85
           N              +  +   +  +  G  +V      QS       +     G     
Sbjct: 293 NGMVYATYTNGQSQLQGQVVLADFANTQGLSKVSGTAWTQSFSSGAPIMGVPGTGTLGDL 352

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             G ++  NV++  E   +    R Y AN +TI  +  +     +
Sbjct: 353 TPGALEGSNVDLTSELVALMTAQRNYQANAKTISTNDKLTQALFN 397



 Score = 40.2 bits (92), Expect = 0.100,   Method: Composition-based stats.
 Identities = 16/40 (40%), Positives = 20/40 (50%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR 46
          S +IA SGL   +  +  IS NIANA T G   G   +  
Sbjct: 2  SFNIALSGLDATNTELNTISHNIANASTYGFKGGRTEFAA 41


>gi|148980302|ref|ZP_01815989.1| flagellar hook protein E [Vibrionales bacterium SWAT-3]
 gi|145961321|gb|EDK26631.1| flagellar hook protein E [Vibrionales bacterium SWAT-3]
          Length = 408

 Score = 48.7 bits (114), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 20/45 (44%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            SG ++  NV++  E   +    R Y AN ++I  S  +     +
Sbjct: 362 TSGALEGSNVDLTSELVALMTAQRNYQANTKSISTSDQLTQALFN 406



 Score = 38.7 bits (88), Expect = 0.26,   Method: Composition-based stats.
 Identities = 15/39 (38%), Positives = 19/39 (48%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          S  IA SGL   ++ +  IS NIAN  TTG       + 
Sbjct: 2  SFSIALSGLNASNSELNTISNNIANVSTTGFKESRTEFA 40


>gi|172058672|ref|YP_001815132.1| hypothetical protein Exig_2667 [Exiguobacterium sibiricum 255-15]
 gi|171991193|gb|ACB62115.1| protein of unknown function DUF1078 domain protein [Exiguobacterium
           sibiricum 255-15]
          Length = 260

 Score = 48.7 bits (114), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 17/100 (17%), Positives = 34/100 (34%)

Query: 33  RTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKY 92
              G+  G     R+ ++   V        +  +G    T   ++          G ++ 
Sbjct: 161 NKDGNITGVLNGERRVLARIGVADIPNHGELTDVGGGLYTTAGQYQNATGNPLTVGTLET 220

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
            NV++  E  ++ +  R Y  N + +  S  MM     L 
Sbjct: 221 SNVDMATEMTNLTQIQRAYQFNSKALTTSDQMMGIVTSLK 260


>gi|109947808|ref|YP_665036.1| flagellar hook protein FlgE [Helicobacter acinonychis str. Sheeba]
 gi|109715029|emb|CAK00037.1| flagellar hook protein [Helicobacter acinonychis str. Sheeba]
          Length = 605

 Score = 48.7 bits (114), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 17/45 (37%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NVN      ++    R Y  N +      DM+   + L +
Sbjct: 561 YLETSNVNAGNALTNLILMQRGYSMNAKAFGAGDDMIKEAISLKK 605


>gi|148256818|ref|YP_001241403.1| putative flagellar hook protein flgE [Bradyrhizobium sp. BTAi1]
 gi|146408991|gb|ABQ37497.1| putative Flagellar hook protein flgE [Bradyrhizobium sp. BTAi1]
          Length = 601

 Score = 48.7 bits (114), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 23/44 (52%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  N ++  E   +  T + Y AN + I  ++ M+   L++LR
Sbjct: 558 LEGSNTDIADEFTKLIVTQQAYSANTKVITTANSMVQDLLNVLR 601



 Score = 41.0 bits (94), Expect = 0.049,   Method: Composition-based stats.
 Identities = 21/103 (20%), Positives = 32/103 (31%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             +  + + + SGL+ QS  +Q IS NIANA T G       +     +       + G 
Sbjct: 1   MGIFDAMNTSVSGLSAQSFALQNISGNIANASTVGYKGIGTSFEDLIPNATNPTRQNAGG 60

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
                    +T             A     + NV       D 
Sbjct: 61  VTAFAKATITTQGTVSTSSVATNMAINGDGFFNVQKASSVVDN 103


>gi|296535149|ref|ZP_06897378.1| flagellar hook protein FlgE [Roseomonas cervicalis ATCC 49957]
 gi|296264524|gb|EFH10920.1| flagellar hook protein FlgE [Roseomonas cervicalis ATCC 49957]
          Length = 436

 Score = 48.7 bits (114), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 24/44 (54%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  NV++  E + M    R Y AN + +     +M+ T+D+LR
Sbjct: 393 IEASNVDITSEFSKMIVAQRAYSANSRVLSTVSGLMSETVDMLR 436



 Score = 36.0 bits (81), Expect = 1.6,   Method: Composition-based stats.
 Identities = 18/70 (25%), Positives = 30/70 (42%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            L  S + A SGL  Q+A +  +S N+AN++TTG       +  +       ++GS  V
Sbjct: 3  MSLNGSLYAATSGLGAQTAAITNVSNNVANSQTTGYKRVDTAFAEQLSQSTARLNGSSTV 62

Query: 62 RVKKIGVDQS 71
              +     
Sbjct: 63 SAAPVATVSR 72


>gi|217976240|ref|YP_002360387.1| flagellar hook protein FlgE [Methylocella silvestris BL2]
 gi|217501616|gb|ACK49025.1| flagellar basal body FlaE domain protein [Methylocella silvestris
           BL2]
          Length = 414

 Score = 48.7 bits (114), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 8/44 (18%), Positives = 23/44 (52%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++   V++  +  DM    R Y +N +  +   ++++T  ++L+
Sbjct: 371 LESSTVDLASQLTDMIVAQRSYESNSKVFQTGSELLSTLNNMLK 414



 Score = 41.4 bits (95), Expect = 0.039,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 27/59 (45%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
            L ++   + SG+A Q+ ++  +S+NIAN+ TTG       +           + + G
Sbjct: 1  MSLFSALTASVSGMAAQANKLSTVSDNIANSDTTGYKQAMTEFENLISQAGTSSYNASG 59


>gi|149202208|ref|ZP_01879181.1| flagellar hook protein FlgE [Roseovarius sp. TM1035]
 gi|149144306|gb|EDM32337.1| flagellar hook protein FlgE [Roseovarius sp. TM1035]
          Length = 419

 Score = 48.7 bits (114), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 10/56 (17%), Positives = 25/56 (44%)

Query: 76  EFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
                   A  +G V+  NV++  +  ++    R Y A+ + ++ +  +  T L++
Sbjct: 362 VPGTSGFGAIRAGSVERSNVDLTEQLVNLIMAQRNYQASAKALETNGTLADTVLNI 417



 Score = 37.9 bits (86), Expect = 0.47,   Method: Composition-based stats.
 Identities = 19/66 (28%), Positives = 23/66 (34%), Gaps = 3/66 (4%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTT---GDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          S H A SGL      + + S NIAN  T    G           +           G  V
Sbjct: 2  SFHTALSGLNAAQTDISVTSNNIANVGTLGFHGSRAEFADIYTTSPYSRPASQIGSGTEV 61

Query: 64 KKIGVD 69
           +IGVD
Sbjct: 62 SRIGVD 67


>gi|254499121|ref|ZP_05111811.1| putative flagellar basal body rod protein [Legionella drancourtii
           LLAP12]
 gi|254351660|gb|EET10505.1| putative flagellar basal body rod protein [Legionella drancourtii
           LLAP12]
          Length = 237

 Score = 48.7 bits (114), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 26/44 (59%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            G ++  NV  + E  DM +T+R + AN + ++ + +++ T ++
Sbjct: 187 QGFIEQSNVKSIDEMMDMVKTSRHFEANQRIMRTADNLLATAIN 230


>gi|304438314|ref|ZP_07398255.1| flagellar basal-body rod protein FlgG [Selenomonas sp. oral taxon
           149 str. 67H29BP]
 gi|304368680|gb|EFM22364.1| flagellar basal-body rod protein FlgG [Selenomonas sp. oral taxon
           149 str. 67H29BP]
          Length = 266

 Score = 48.7 bits (114), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 14/99 (14%), Positives = 34/99 (34%), Gaps = 1/99 (1%)

Query: 33  RTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVAN-ASGIVK 91
             T  + G      + I+    +       V K G +         P         G+++
Sbjct: 162 NVTVSSDGRIYANGRQIAQLGFVQFDEEKAVIKEGDNLYKPQPGAQPQQATGVIEQGMLE 221

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             N +V+ E  ++    R+Y A  + ++    ++   ++
Sbjct: 222 MSNTSVVTEMVELINNYRVYEAGSKAVQTQDALLDKAVN 260



 Score = 36.4 bits (82), Expect = 1.2,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 21/42 (50%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          +    +IA SG+  ++    +I+ N+ANA TTG        R
Sbjct: 1  MWRGLYIAASGMITETKHTDMIANNLANAATTGYKRDDMAVR 42


>gi|306820921|ref|ZP_07454541.1| flagellar basal body and hook protein [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
 gi|304551035|gb|EFM39006.1| flagellar basal body and hook protein [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
          Length = 372

 Score = 48.7 bits (114), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 9/44 (20%), Positives = 20/44 (45%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            G ++  NV+ + E  DM +  R + ++ + I     +M    +
Sbjct: 324 QGYLEKSNVSAIDEMVDMIQMYRGFESDQKVINAYDQIMQKAAN 367


>gi|300716218|ref|YP_003741021.1| flagellar biosynthesis, hook protein [Erwinia billingiae Eb661]
 gi|299062054|emb|CAX59170.1| Flagellar biosynthesis, hook protein [Erwinia billingiae Eb661]
          Length = 414

 Score = 48.7 bits (114), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 26/51 (50%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +     +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 363 NLGTLTAGALESSNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 413


>gi|218461961|ref|ZP_03502052.1| flagellar hook protein FlgE [Rhizobium etli Kim 5]
          Length = 316

 Score = 48.7 bits (114), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/101 (23%), Positives = 41/101 (40%), Gaps = 4/101 (3%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             +  S   A SG+  Q+ R+  +++NIAN  TTG    S  +    +      + SGGV
Sbjct: 1   MSIFGSMKTAVSGMNAQANRLSTVADNIANVNTTGYKAVSTSFSSLVLPSSGGNYNSGGV 60

Query: 62  R--VKKIGVDQSTFVEEFDPGHPVANASGI--VKYPNVNVL 98
           +  V++   DQ              +  G   V+ P+   +
Sbjct: 61  QTSVRQAVSDQGDISYTTSTTDLAISGDGFFIVQGPDGTPV 101


>gi|319648038|ref|ZP_08002255.1| FlhP protein [Bacillus sp. BT1B_CT2]
 gi|317389673|gb|EFV70483.1| FlhP protein [Bacillus sp. BT1B_CT2]
          Length = 271

 Score = 48.7 bits (114), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 20/47 (42%)

Query: 80  GHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
              ++   G ++  NV+V  E  D+  + R Y  N + I     MM 
Sbjct: 219 RQDISLKQGFLESSNVDVSKEMTDLISSQRSYQMNSRAITMGDQMMG 265


>gi|307721502|ref|YP_003892642.1| flagellar hook-associated protein FlgK [Sulfurimonas autotrophica
           DSM 16294]
 gi|306979595|gb|ADN09630.1| flagellar hook-associated protein FlgK [Sulfurimonas autotrophica
           DSM 16294]
          Length = 626

 Score = 48.7 bits (114), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 12/70 (17%), Positives = 22/70 (31%)

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
             I  + +    E       A          V++  E  ++ +    Y A  + I     
Sbjct: 557 VGISTNSAITRNETVSTQFNATEMEYNSITKVSIDEEMTNLIKYQTSYGAAAKVITTVDQ 616

Query: 124 MMTTTLDLLR 133
           MM T L + +
Sbjct: 617 MMQTLLGIKQ 626



 Score = 41.4 bits (95), Expect = 0.041,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 23/74 (31%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  +  +  I  SGL+     +     NIANA   G T                     G
Sbjct: 1  MASIFNTLSIGYSGLSTAQVGINTTGHNIANAENEGYTRQRVVTSAANPLITSAGDVGNG 60

Query: 61 VRVKKIGVDQSTFV 74
          V V+ I      FV
Sbjct: 61 VEVQDIKRVFDNFV 74


>gi|239995124|ref|ZP_04715648.1| flagellar basal-body rod protein FlgF [Alteromonas macleodii ATCC
           27126]
          Length = 247

 Score = 48.7 bits (114), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 26/48 (54%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            SG+++  NVN + E  DM    R Y   ++ +KQ+ ++ T    LLR
Sbjct: 198 MSGMLEGSNVNAVDEMVDMISLQRHYELQVKMMKQAEELDTRGNQLLR 245


>gi|294501851|ref|YP_003565551.1| flagellar hook-basal body complex protein FlhO [Bacillus megaterium
           QM B1551]
 gi|294351788|gb|ADE72117.1| flagellar hook-basal body complex protein FlhO [Bacillus megaterium
           QM B1551]
          Length = 274

 Score = 48.7 bits (114), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 14/76 (18%), Positives = 27/76 (35%), Gaps = 1/76 (1%)

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
            G  + +   +Q       +PG       G V+  NV+      D+    R + AN + +
Sbjct: 197 AGNGLYETLNNQPLPSARNNPGISYQLKQGFVERSNVDAAQNMTDLLTAYRAFEANQKIM 256

Query: 119 KQSH-DMMTTTLDLLR 133
           +     M     ++ R
Sbjct: 257 QAYDRSMDKAANEIGR 272



 Score = 34.8 bits (78), Expect = 4.2,   Method: Composition-based stats.
 Identities = 15/101 (14%), Positives = 34/101 (33%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +    + A +G+  Q  +  +++ NIANA T G        +       + M        
Sbjct: 1   MFKGFYTAAAGMLSQQRQTDLLTNNIANANTPGFKADQGTLKAFPDMLLQRMESEDLPTD 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
           + I V     +   + G  +          ++    ++ D+
Sbjct: 61  RSISVQNKKDIGAINTGVYMQETVPNFTQGDLQQTSQSTDI 101


>gi|56460252|ref|YP_155533.1| flagellar hook protein FlgE [Idiomarina loihiensis L2TR]
 gi|56179262|gb|AAV81984.1| Flagellar hook protein FlgE [Idiomarina loihiensis L2TR]
          Length = 449

 Score = 48.7 bits (114), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 15/84 (17%), Positives = 36/84 (42%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
             + E+ +   GG + ++          E + G      +  ++  NVN+  E  D+   
Sbjct: 365 RFANEQGLTQIGGTKWRESIDSGEPLSGEANTGTFGGIEASALENSNVNLTKELVDLITA 424

Query: 108 NRLYMANLQTIKQSHDMMTTTLDL 131
            R + AN ++++ ++ +  T L +
Sbjct: 425 QRNFQANSRSLEVNNTINQTILQI 448



 Score = 34.1 bits (76), Expect = 7.2,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 18/39 (46%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          S  IA SG+      + + + NI+N +T+G       + 
Sbjct: 2  SFKIALSGINASQKDLDVTANNISNVKTSGFKQSRAEFA 40


>gi|307131609|ref|YP_003883625.1| flagellar hook protein flgE [Dickeya dadantii 3937]
 gi|306529138|gb|ADM99068.1| Flagellar hook protein flgE [Dickeya dadantii 3937]
          Length = 399

 Score = 48.7 bits (114), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 22/41 (53%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 358 ESSNVDMSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 398



 Score = 33.7 bits (75), Expect = 7.9,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 25/65 (38%), Gaps = 4/65 (6%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          S   A SGL   S  + +I  NIAN+ T G    +  +           +   G RV  +
Sbjct: 2  SFSQAVSGLNAASNNLDVIGNNIANSATVGFKASNISFA----DMYAGSNVGLGTRVASV 57

Query: 67 GVDQS 71
            D S
Sbjct: 58 LQDFS 62


>gi|150019072|ref|YP_001311326.1| hypothetical protein Cbei_4260 [Clostridium beijerinckii NCIMB
           8052]
 gi|149905537|gb|ABR36370.1| protein of unknown function DUF1078 domain protein [Clostridium
           beijerinckii NCIMB 8052]
          Length = 363

 Score = 48.7 bits (114), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 22/47 (46%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NV++  +  DM    R + A  + I    +++ T   L+R
Sbjct: 317 QGALEGSNVDLTEQFTDMITATRSFQAASKMITTGDEILQTITGLMR 363


>gi|288962673|ref|YP_003452967.1| flagellar hook protein [Azospirillum sp. B510]
 gi|288914939|dbj|BAI76423.1| flagellar hook protein [Azospirillum sp. B510]
          Length = 427

 Score = 48.7 bits (114), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 23/44 (52%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  NV++  E   + ET R Y ++   ++ + +M+  T  L R
Sbjct: 384 LEQSNVDIATELVSLIETQRAYSSSATLVRTTDEMVEETTRLKR 427



 Score = 41.0 bits (94), Expect = 0.062,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 28/59 (47%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
            L ++     SG+A QS+R+  IS+NI+N++T G    +  +     +  +    S  
Sbjct: 1  MSLYSAMRSGVSGMAAQSSRLAAISDNISNSQTVGYKRATVDFSTLVTAPGDRTSYSAS 59


>gi|146341930|ref|YP_001206978.1| putative flagellar hook protein flgE [Bradyrhizobium sp. ORS278]
 gi|146194736|emb|CAL78761.1| putative Flagellar hook protein flgE [Bradyrhizobium sp. ORS278]
          Length = 601

 Score = 48.7 bits (114), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 23/44 (52%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  N ++  E   +  T + Y AN + I  ++ M+   L++LR
Sbjct: 558 LEGSNTDIADEFTKLIVTQQAYSANTKVITTANSMVQDLLNVLR 601



 Score = 41.4 bits (95), Expect = 0.048,   Method: Composition-based stats.
 Identities = 21/103 (20%), Positives = 32/103 (31%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             +  + + + SGL+ QS  +Q IS NIANA T G       +     +       + G 
Sbjct: 1   MGIFDAMNTSVSGLSAQSFALQNISGNIANASTVGYKGIGTSFEDLIPNATNPTRQNAGG 60

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
                    +T             A     + NV       D 
Sbjct: 61  VTAFAKATITTQGTVSTSSVATNMAINGDGFFNVQKATSVVDN 103


>gi|90577344|ref|ZP_01233155.1| flagellar hook protein [Vibrio angustum S14]
 gi|90440430|gb|EAS65610.1| flagellar hook protein [Vibrio angustum S14]
          Length = 408

 Score = 48.7 bits (114), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 12/60 (20%), Positives = 23/60 (38%)

Query: 71  STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           +        G      +G ++  NV++  E   +    R Y AN +TI  S  +  +  +
Sbjct: 347 APVNGAPSTGTLGGLVAGALEGSNVDLTSELVSLMTAQRNYQANAKTISTSDKLTQSLFN 406



 Score = 39.1 bits (89), Expect = 0.22,   Method: Composition-based stats.
 Identities = 14/38 (36%), Positives = 19/38 (50%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          S  IA SGL   + ++  IS NIAN  T+G       +
Sbjct: 2  SFDIALSGLDATNVQLNTISNNIANVSTSGFKESRTEF 39


>gi|308071139|ref|YP_003872744.1| flagellar basal body rod protein [Paenibacillus polymyxa E681]
 gi|305860418|gb|ADM72206.1| Flagellar basal body rod protein [Paenibacillus polymyxa E681]
          Length = 294

 Score = 48.7 bits (114), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 12/71 (16%), Positives = 23/71 (32%)

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           G    ++                V+   G ++  NV+      DM    R Y AN + I+
Sbjct: 219 GNGNFRLNDTDGATARMMTANDAVSVRQGYLEVSNVDASQSMVDMMAALRAYEANQKVIQ 278

Query: 120 QSHDMMTTTLD 130
                +   ++
Sbjct: 279 FYDKSLDKAVN 289



 Score = 36.0 bits (81), Expect = 1.6,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 28/68 (41%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++   + A +GL  Q  R   +++NIAN  TTG    +   R        +  G+     
Sbjct: 1  MLRGLYTAAAGLMTQQRRHDTVTQNIANMNTTGYKQENSVQRSFPEMLISMTGGNPDNPG 60

Query: 64 KKIGVDQS 71
          + +G   +
Sbjct: 61 RTVGKLNT 68


>gi|149194904|ref|ZP_01871998.1| flagellar hook-associated protein [Caminibacter mediatlanticus
           TB-2]
 gi|149135063|gb|EDM23545.1| flagellar hook-associated protein [Caminibacter mediatlanticus
           TB-2]
          Length = 717

 Score = 48.7 bits (114), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 10/60 (16%), Positives = 22/60 (36%)

Query: 74  VEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            +E       +  +       VN+  E  ++ +  R Y AN + I   + M+     + +
Sbjct: 658 KKETTQTLFTSIQNQYYSISGVNIDEELINLEKFQRGYQANAKVITTINQMLDALFGIKQ 717



 Score = 42.6 bits (98), Expect = 0.019,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 24/73 (32%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            + +S   A SGL      +Q  S NI+NA           +               GV
Sbjct: 1  MAISSSLSTALSGLNAHQTAIQTTSNNISNASNPDYVRERAVFSTLPPINSIPGDIGTGV 60

Query: 62 RVKKIGVDQSTFV 74
           + KI     TFV
Sbjct: 61 NISKIYRITDTFV 73


>gi|94266588|ref|ZP_01290271.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
 gi|93452783|gb|EAT03318.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
          Length = 619

 Score = 48.7 bits (114), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 31/78 (39%)

Query: 55  MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
           +  +     K   +     +     G         ++  NV++  E +D+  T R++ AN
Sbjct: 542 LEPTSHNAYKATAMAGEPTIGVAGEGSFGKVLGNTLEGSNVDLGREFSDLIMTQRIFQAN 601

Query: 115 LQTIKQSHDMMTTTLDLL 132
            ++I  + ++  T + L 
Sbjct: 602 SKSITTADEVFDTLMRLK 619



 Score = 34.1 bits (76), Expect = 7.1,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 36/109 (33%), Gaps = 2/109 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-G 60
             L        SGL   S  M ++ +NIAN  TT        ++    S +E     G G
Sbjct: 1   MSLHNMIFNGVSGLNSMSGNMAVMGDNIANVNTTSYKSSQASFQNILTSSQERFGEIGNG 60

Query: 61  VRVKKIGVDQSTFVEE-FDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +V  I  +      E  +    +A +       N  +  E    R+  
Sbjct: 61  SQVAAITKNFRPGDLETTNQSTDMAISGKGFFMVNNPLADEMLYTRDGQ 109


>gi|323495377|ref|ZP_08100454.1| flagellar hook protein FlgE [Vibrio brasiliensis LMG 20546]
 gi|323310300|gb|EGA63487.1| flagellar hook protein FlgE [Vibrio brasiliensis LMG 20546]
          Length = 434

 Score = 48.3 bits (113), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 14/84 (16%), Positives = 34/84 (40%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
            ++ E+ +   GG +             E + G     +SG ++  N+++  E  D+   
Sbjct: 350 RVANEQGLDKKGGTQWDSTQFSGDKIWGESNKGSFGTISSGTLEQSNIDMTQELVDLISA 409

Query: 108 NRLYMANLQTIKQSHDMMTTTLDL 131
            R + AN ++++  +      L +
Sbjct: 410 QRNFQANSRSLEVHNQTQQNILQI 433



 Score = 39.1 bits (89), Expect = 0.19,   Method: Composition-based stats.
 Identities = 12/35 (34%), Positives = 16/35 (45%)

Query: 10 IANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +A SGL+     +   S NIANA T G       +
Sbjct: 4  VALSGLSAAQLDLNTTSNNIANANTFGFKESRAEF 38


>gi|195953027|ref|YP_002121317.1| protein of unknown function DUF1078 domain protein
           [Hydrogenobaculum sp. Y04AAS1]
 gi|195932639|gb|ACG57339.1| protein of unknown function DUF1078 domain protein
           [Hydrogenobaculum sp. Y04AAS1]
          Length = 583

 Score = 48.3 bits (113), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 26/58 (44%)

Query: 74  VEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
                PG      SG+++  NV++      +    R Y AN + +  S +++  TL++
Sbjct: 523 PTILLPGSADIIQSGMLEQSNVDIAQAYIQLVTAERSYQANAKVVTSSDNVLQATLNM 580


>gi|83309603|ref|YP_419867.1| flagellar hook protein FlgE [Magnetospirillum magneticum AMB-1]
 gi|82944444|dbj|BAE49308.1| Flagellar hook protein FlgE [Magnetospirillum magneticum AMB-1]
          Length = 843

 Score = 48.3 bits (113), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 19/44 (43%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++   V++  E   M  T R Y A  + I  +  M+   + + R
Sbjct: 800 LEASTVDIGSEFTTMIITQRAYSAAAKIITTADQMLDELVQIKR 843



 Score = 34.5 bits (77), Expect = 5.5,   Method: Composition-based stats.
 Identities = 18/59 (30%), Positives = 24/59 (40%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
            L  +     SGLA QS+ M  IS+NI N  TTG       ++        +   S G
Sbjct: 1  MSLYGALFSGVSGLASQSSAMGAISDNITNVNTTGYKGAKVNFQTLVTKQVSLTTYSPG 59


>gi|332530688|ref|ZP_08406619.1| flagellar basal body rod protein [Hylemonella gracilis ATCC 19624]
 gi|332039856|gb|EGI76251.1| flagellar basal body rod protein [Hylemonella gracilis ATCC 19624]
          Length = 101

 Score = 48.3 bits (113), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 50/130 (38%), Gaps = 32/130 (24%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M   ++S  I  SGL     R+   + N+AN  T G       ++R+T++ ++  + +G 
Sbjct: 1   MMASLSSIGI--SGLQAAQLRLDSSAHNVANLNTPG-------FKRQTVTQQDAPNLAGT 51

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
                   ++                        V +  E  +    +  + ANLQT+K 
Sbjct: 52  RTRLGKAREE-----------------------GVTLEGEVVEQMSASHAFKANLQTLKT 88

Query: 121 SHDMMTTTLD 130
             DM+ + LD
Sbjct: 89  QEDMLGSLLD 98


>gi|152990358|ref|YP_001356080.1| flagellar basal-body rod protein FlgF [Nitratiruptor sp. SB155-2]
 gi|151422219|dbj|BAF69723.1| flagellar basal-body rod protein FlgF [Nitratiruptor sp. SB155-2]
          Length = 238

 Score = 48.3 bits (113), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 24/73 (32%)

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
                I  D     +  +         G ++  N+N L+E  +M    R +      IK 
Sbjct: 165 YDNVTIIGDTYYEPQGNELTVDAKVRQGYLESSNINPLMEMTEMIMAQRRFDMYGNMIKS 224

Query: 121 SHDMMTTTLDLLR 133
              +   T ++ R
Sbjct: 225 MDQLNQKTNEIGR 237


>gi|89895707|ref|YP_519194.1| hypothetical protein DSY2961 [Desulfitobacterium hafniense Y51]
 gi|89335155|dbj|BAE84750.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 251

 Score = 48.3 bits (113), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 22/52 (42%), Gaps = 1/52 (1%)

Query: 83  VANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD-LLR 133
            A   G ++  NVN+  +   M    R Y AN + I+     +   ++ + R
Sbjct: 198 EAVLQGTLEGSNVNLPGQMVKMITVMRAYEANQKVIQTHDATLEKAVNEIGR 249


>gi|304321120|ref|YP_003854763.1| putative flagellar hook protein [Parvularcula bermudensis HTCC2503]
 gi|303300022|gb|ADM09621.1| putative flagellar hook protein [Parvularcula bermudensis HTCC2503]
          Length = 446

 Score = 48.3 bits (113), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 22/44 (50%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +    V+V  E   + +T R Y +N + I+   +++  T  L+R
Sbjct: 403 LMESTVDVANELTQLIQTQRAYSSNAKIIQTVDEILQETNSLVR 446


>gi|261253614|ref|ZP_05946187.1| flagellar hook protein FlgE [Vibrio orientalis CIP 102891]
 gi|260937005|gb|EEX92994.1| flagellar hook protein FlgE [Vibrio orientalis CIP 102891]
          Length = 434

 Score = 48.3 bits (113), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 14/84 (16%), Positives = 35/84 (41%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
            ++ E+ +   GG +             E + G   + +SG ++  N+++  E  D+   
Sbjct: 350 RVANEQGLDKKGGTQWDSTQFSGDKIWGESNKGSFGSISSGTLEQSNIDMTQELVDLISA 409

Query: 108 NRLYMANLQTIKQSHDMMTTTLDL 131
            R + AN ++++  +      L +
Sbjct: 410 QRNFQANSRSLEVHNQTQQNILQI 433



 Score = 39.1 bits (89), Expect = 0.19,   Method: Composition-based stats.
 Identities = 12/35 (34%), Positives = 16/35 (45%)

Query: 10 IANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +A SGL+     +   S NIANA T G       +
Sbjct: 4  VALSGLSAAQLDLNTTSNNIANANTYGFKESRAEF 38


>gi|107023953|ref|YP_622280.1| flagellar hook protein FlgE [Burkholderia cenocepacia AU 1054]
 gi|116691040|ref|YP_836663.1| flagellar hook protein FlgE [Burkholderia cenocepacia HI2424]
 gi|105894142|gb|ABF77307.1| flagellar basal body FlaE [Burkholderia cenocepacia AU 1054]
 gi|116649129|gb|ABK09770.1| flagellar basal body FlaE domain protein [Burkholderia cenocepacia
           HI2424]
          Length = 413

 Score = 48.3 bits (113), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 15/83 (18%), Positives = 30/83 (36%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +    +   GG +  +        V      +        ++  NV++  +  ++    
Sbjct: 331 FNNPNGLVNLGGNQYAESAASGVPQVSAPGSTNHGTLQGSALENSNVDLTSQLVNLITAQ 390

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y AN QTIK    +  T ++L
Sbjct: 391 RNYQANAQTIKTQQTVDQTLINL 413


>gi|308184859|ref|YP_003928992.1| flagellar hook-associated protein FlgK [Helicobacter pylori SJM180]
 gi|308060779|gb|ADO02675.1| flagellar hook-associated protein FlgK [Helicobacter pylori SJM180]
          Length = 606

 Score = 48.3 bits (113), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 21/119 (17%), Positives = 35/119 (29%), Gaps = 4/119 (3%)

Query: 19  SARMQIISEN--IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEE 76
              +  I+ N  +AN          D Y  K       +         KI  D       
Sbjct: 488 RPWLAPINGNFDVANMMQQLQYDSVDFYNDKFDIKPMKISEFYQFLTGKINTDAEKSGRI 547

Query: 77  FDPGHPV--ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            D    +        +    V+V  E  ++ +    Y AN + I     M+ T L + +
Sbjct: 548 LDTKKSMLETIKKEQLSISQVSVDEEMLNLIKFQSGYAANAKVISAIDRMIDTLLGIKQ 606



 Score = 44.9 bits (104), Expect = 0.004,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 40/111 (36%), Gaps = 9/111 (8%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M  +++S + + +GL    + + +   NI+NA         + Y R+ +  +       G
Sbjct: 1   MGGILSSLNTSYTGLQAHQSMVDVTGNNISNASD-------EFYSRQRVIAKPQAAYMYG 53

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
            +   +GVD        D            +  N     E + ++E +  +
Sbjct: 54  TKNVNMGVDVEAIERVHDEFVFARYTKANYE--NTYYDTEFSHLKEASAYF 102


>gi|251789168|ref|YP_003003889.1| flagellar hook protein FlgE [Dickeya zeae Ech1591]
 gi|247537789|gb|ACT06410.1| flagellar basal body FlaE domain protein [Dickeya zeae Ech1591]
          Length = 405

 Score = 48.3 bits (113), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 22/41 (53%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 364 ESSNVDMSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 404



 Score = 33.7 bits (75), Expect = 9.0,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 24/63 (38%), Gaps = 4/63 (6%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          S   A SGL   S  + +I  NIAN+ T G    +  +           +   G RV  +
Sbjct: 2  SFSQAVSGLNAASNNLDVIGNNIANSATVGFKASNISFA----DMYAGSNVGLGTRVASV 57

Query: 67 GVD 69
            D
Sbjct: 58 LQD 60


>gi|86357860|ref|YP_469752.1| flagellar basal body rod protein [Rhizobium etli CFN 42]
 gi|86281962|gb|ABC91025.1| probable flagellar basal body rod protein [Rhizobium etli CFN 42]
          Length = 101

 Score = 48.3 bits (113), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 22/133 (16%), Positives = 40/133 (30%), Gaps = 32/133 (24%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             +    +IA SG+  Q+ R+  I+ N+AN+ T                    ++ S   
Sbjct: 1   MSISGITNIALSGVRAQTTRVGAIANNVANSSTP---------------DYARLNTSLTT 45

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
                                           +V+   E  ++ E  + Y AN    +  
Sbjct: 46  VASGGVQATGNPT-----------------ASDVDPATELTNLLEAEQSYKANATVFETG 88

Query: 122 HDMMTTTLDLLRD 134
            DM    + + RD
Sbjct: 89  ADMWEMLMSIKRD 101


>gi|171320708|ref|ZP_02909721.1| protein of unknown function DUF1078 domain protein [Burkholderia
           ambifaria MEX-5]
 gi|171094035|gb|EDT39133.1| protein of unknown function DUF1078 domain protein [Burkholderia
           ambifaria MEX-5]
          Length = 388

 Score = 48.3 bits (113), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 21/129 (16%), Positives = 40/129 (31%), Gaps = 14/129 (10%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            ++AS +I   G          I    A A      P      ++ +     +  +  + 
Sbjct: 270 GMLASMNIDGDGQLALRYSNGQIGHAGAVALARFADP------QRLVRLGAGLFDASHLP 323

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
             +        V            SG V+  NV++  E   +    R + A  Q I  S+
Sbjct: 324 PPRYAKSGDPLVG--------QLRSGAVEASNVDLSGEFGQLILIQRGFQAASQVISTSN 375

Query: 123 DMMTTTLDL 131
           +M+     +
Sbjct: 376 EMIMQLFQM 384



 Score = 37.9 bits (86), Expect = 0.50,   Method: Composition-based stats.
 Identities = 14/42 (33%), Positives = 23/42 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S +I  SGLA  S  +Q I +N+AN  T G    +  ++
Sbjct: 1  MLDSIYIGMSGLAAYSKGLQTIGDNVANLNTPGFKSSAPRFQ 42


>gi|52787553|ref|YP_093382.1| FlhP [Bacillus licheniformis ATCC 14580]
 gi|163119681|ref|YP_080952.2| flagellar hook-basal body protein [Bacillus licheniformis ATCC
           14580]
 gi|52350055|gb|AAU42689.1| FlhP [Bacillus licheniformis ATCC 14580]
 gi|145903191|gb|AAU25314.2| flagellar hook-basal body protein [Bacillus licheniformis ATCC
           14580]
          Length = 275

 Score = 48.3 bits (113), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 20/47 (42%)

Query: 80  GHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
              ++   G ++  NV+V  E  D+  + R Y  N + I     MM 
Sbjct: 223 RQDISLKQGFLESSNVDVSKEMTDLISSQRSYQMNSRAITMGDQMMG 269


>gi|295707199|ref|YP_003600274.1| flagellar hook-basal body complex protein FlhO [Bacillus megaterium
           DSM 319]
 gi|294804858|gb|ADF41924.1| flagellar hook-basal body complex protein FlhO [Bacillus megaterium
           DSM 319]
          Length = 274

 Score = 48.3 bits (113), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 27/75 (36%), Gaps = 1/75 (1%)

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           G  + +   +Q       +PG       G V+  NV+      D+    R + AN + ++
Sbjct: 198 GNGLYETLNNQPLPSARNNPGISYQLKQGFVERSNVDAAQSMTDLLTAYRAFEANQKIMQ 257

Query: 120 QSH-DMMTTTLDLLR 133
                M     ++ R
Sbjct: 258 AYDRSMDKAANEIGR 272



 Score = 34.8 bits (78), Expect = 4.4,   Method: Composition-based stats.
 Identities = 14/101 (13%), Positives = 34/101 (33%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +    + A +G+  Q  +  +++ NIANA T G        +       + M        
Sbjct: 1   MFKGFYTAAAGMLSQQRQTDLLTNNIANANTPGFKADQGTLKAFPDMLLQRMESEDLPTD 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
           + I V     +   + G  +          ++    ++ ++
Sbjct: 61  RSISVQNKKEIGAINTGVYMQETVPSFTQGDLQQTSQSTNI 101


>gi|271500066|ref|YP_003333091.1| fagellar hook-basal body protein [Dickeya dadantii Ech586]
 gi|270343621|gb|ACZ76386.1| fagellar hook-basal body protein [Dickeya dadantii Ech586]
          Length = 399

 Score = 48.3 bits (113), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 22/41 (53%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 358 ESSNVDMSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 398


>gi|170734374|ref|YP_001766321.1| flagellar hook protein FlgE [Burkholderia cenocepacia MC0-3]
 gi|254246965|ref|ZP_04940286.1| Flagellar hook protein FlgE [Burkholderia cenocepacia PC184]
 gi|124871741|gb|EAY63457.1| Flagellar hook protein FlgE [Burkholderia cenocepacia PC184]
 gi|169817616|gb|ACA92199.1| flagellar basal body FlaE domain protein [Burkholderia cenocepacia
           MC0-3]
          Length = 413

 Score = 48.3 bits (113), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 15/83 (18%), Positives = 30/83 (36%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +    +   GG +  +        V      +        ++  NV++  +  ++    
Sbjct: 331 FNNPNGLVNLGGNQYAESAASGVPQVSAPGSTNHGTLQGSALENSNVDLTSQLVNLITAQ 390

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y AN QTIK    +  T ++L
Sbjct: 391 RNYQANAQTIKTQQTVDQTLINL 413


>gi|238752866|ref|ZP_04614331.1| Lateral flagellar hook protein (FlgE-like) [Yersinia rohdei ATCC
           43380]
 gi|238708905|gb|EEQ01158.1| Lateral flagellar hook protein (FlgE-like) [Yersinia rohdei ATCC
           43380]
          Length = 411

 Score = 48.3 bits (113), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 19/43 (44%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           ++  NV++  E   +    R Y AN + I  +  MM     +L
Sbjct: 369 LEASNVDLTAELVGLMTAQRNYQANTKIISTNDSMMNALFQVL 411



 Score = 36.8 bits (83), Expect = 1.1,   Method: Composition-based stats.
 Identities = 21/84 (25%), Positives = 32/84 (38%), Gaps = 1/84 (1%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          S  IAN+GL+  + ++  IS NIAN+ T G       +       + +     GV  + I
Sbjct: 2  SFSIANTGLSAVTEQLSTISNNIANSATKGFKASRTEFASMYAQSQPLGVAVSGVS-QSI 60

Query: 67 GVDQSTFVEEFDPGHPVANASGIV 90
            D S           +A     V
Sbjct: 61 NKDGSIDRTGNAMDLAIAGNGFFV 84


>gi|148270379|ref|YP_001244839.1| hypothetical protein Tpet_1249 [Thermotoga petrophila RKU-1]
 gi|147735923|gb|ABQ47263.1| protein of unknown function DUF1078 domain protein [Thermotoga
           petrophila RKU-1]
          Length = 249

 Score = 48.3 bits (113), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 10/54 (18%), Positives = 20/54 (37%)

Query: 77  FDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             P        G V+  NV+ L    DM    R Y  + + +  + ++    ++
Sbjct: 190 PSPSENFRIMQGYVEKSNVDALKAMVDMISAMRHYELSQRAVTVNDELNGKLIN 243


>gi|148358806|ref|YP_001250013.1| flagellar hook protein FlgE [Legionella pneumophila str. Corby]
 gi|296106851|ref|YP_003618551.1| flagellar hook protein FlgE [Legionella pneumophila 2300/99 Alcoy]
 gi|148280579|gb|ABQ54667.1| flagellar hook protein FlgE [Legionella pneumophila str. Corby]
 gi|295648752|gb|ADG24599.1| flagellar hook protein FlgE [Legionella pneumophila 2300/99 Alcoy]
          Length = 437

 Score = 48.3 bits (113), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/83 (19%), Positives = 30/83 (36%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +  E +   G     +        V     G      SG ++  NV++  E   +    
Sbjct: 354 FADPESLQNIGNTSWAETTSSGQPLVSAPGSGGLGLVNSGRLEESNVDLTGELVKLISAQ 413

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R + AN QTI+    +  T +++
Sbjct: 414 RNFQANAQTIRTGDAITQTIINI 436


>gi|171321213|ref|ZP_02910183.1| protein of unknown function DUF1078 domain protein [Burkholderia
           ambifaria MEX-5]
 gi|171093523|gb|EDT38693.1| protein of unknown function DUF1078 domain protein [Burkholderia
           ambifaria MEX-5]
          Length = 258

 Score = 48.3 bits (113), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/131 (12%), Positives = 36/131 (27%), Gaps = 3/131 (2%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            L A+  +       +   +    + +A                   +    +   G   
Sbjct: 131 PLKAAISVPRD---AERLEIAPDGKVLAMIPNQAAPLEVGRIEIAQATDPRALQPLGDGT 187

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
            +      +         +    A G  +  NV +  E A +    R Y A+ + ++   
Sbjct: 188 YRIADEGAAVIRSRPGEDNAGTLAQGFSEASNVALADELAGLMLYQRAYAASAKLVQAGD 247

Query: 123 DMMTTTLDLLR 133
           ++M     L R
Sbjct: 248 ELMAIANGLKR 258



 Score = 40.2 bits (92), Expect = 0.096,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 19/41 (46%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +    +I  +GLA Q   +   ++NIAN  T     G+  +
Sbjct: 1  MNNLFYIGATGLAAQQTAVDTTAQNIANLNTPAFKRGAVTF 41


>gi|116694219|ref|YP_728430.1| flagellar hook protein FlgE [Ralstonia eutropha H16]
 gi|113528718|emb|CAJ95065.1| flagellar hook protein [Ralstonia eutropha H16]
          Length = 408

 Score = 48.3 bits (113), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 15/46 (32%), Positives = 24/46 (52%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            S  V+  NV++  +  ++    R Y AN QTIK    +M T ++L
Sbjct: 363 RSNAVEASNVDLSGQLVNLIVAQRNYQANAQTIKAQDTVMQTLVNL 408


>gi|303328382|ref|ZP_07358820.1| flagellar basal-body rod protein FlgG [Desulfovibrio sp. 3_1_syn3]
 gi|302861712|gb|EFL84648.1| flagellar basal-body rod protein FlgG [Desulfovibrio sp. 3_1_syn3]
          Length = 264

 Score = 48.3 bits (113), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 21/49 (42%), Gaps = 1/49 (2%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD-LLR 133
             G  +  NV V+ E  +M E  R + A  + ++ S  +     + + R
Sbjct: 213 EQGFAEAANVQVVTEMVNMIEVQRQFEAYQKVMQSSDSLDRAANEKIGR 261


>gi|218679061|ref|ZP_03526958.1| hypothetical protein RetlC8_09354 [Rhizobium etli CIAT 894]
          Length = 101

 Score = 48.3 bits (113), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/133 (21%), Positives = 44/133 (33%), Gaps = 32/133 (24%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             +    + A SG+  Q+ R+  I+ N+AN+ T+G       Y R   S   V  G    
Sbjct: 1   MSISGITNTALSGMRAQTTRIGAIANNVANSSTSG-------YARLNTSLTSVASGGVQA 53

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
            V                              +V+   E  D+ E  + Y AN    +  
Sbjct: 54  TVSPT-------------------------ASDVDPATELTDLLEAEQSYKANAVVFETG 88

Query: 122 HDMMTTTLDLLRD 134
            DM    + + RD
Sbjct: 89  ADMWEMLMSIKRD 101


>gi|163803169|ref|ZP_02197052.1| flagellar hook protein [Vibrio sp. AND4]
 gi|159173069|gb|EDP57902.1| flagellar hook protein [Vibrio sp. AND4]
          Length = 399

 Score = 48.3 bits (113), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/105 (15%), Positives = 31/105 (29%), Gaps = 5/105 (4%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQS-----TFVEEFDPGHPVAN 85
           N              +  +   +  +  G  +V      QS       +     G     
Sbjct: 293 NGMVYATYTNGQSQLQGQVVLADFANTQGLSKVSGTSWTQSFSSGAPIMGVPGTGTLGNL 352

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             G ++  NV++  E   +    R Y AN +TI  +  +     +
Sbjct: 353 TPGALEGSNVDLTSELVALMTAQRNYQANAKTISTNDKLTQALFN 397



 Score = 39.9 bits (91), Expect = 0.13,   Method: Composition-based stats.
 Identities = 16/40 (40%), Positives = 20/40 (50%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR 46
          S +IA SGL   +  +  IS NIANA T G   G   +  
Sbjct: 2  SFNIALSGLDATNTELNTISHNIANASTYGFKGGRTEFAA 41


>gi|34556699|ref|NP_906514.1| flagellar hook-associated protein FlgK [Wolinella succinogenes DSM
           1740]
 gi|34482413|emb|CAE09414.1| FLAGELLAR HOOK-ASSOCIATED PROTEIN 1 [Wolinella succinogenes]
          Length = 609

 Score = 48.3 bits (113), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/107 (14%), Positives = 32/107 (29%), Gaps = 2/107 (1%)

Query: 29  IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVE--EFDPGHPVANA 86
           +AN          + +      + E +     +   KI  D +      E       +  
Sbjct: 503 VANKMQQLQYNKVNFFDYNGNQYNETLADFFKLVTTKIATDTADAKTSNEIKKAVLTSVK 562

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
              V    V+   E  ++      Y AN + +     M+ T L + +
Sbjct: 563 QEYVSISEVSTDEELTNLIRFQGGYTANAKVVATLDKMLDTLLGIKQ 609



 Score = 42.9 bits (99), Expect = 0.016,   Method: Composition-based stats.
 Identities = 18/127 (14%), Positives = 31/127 (24%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M  + +S ++A +GL      + +   NIANA     +        K            G
Sbjct: 1   MASIFSSLNLAYTGLQTHQVMVSVTGNNIANASNEFYSRQRVDATAKDPLKLSNYSLGQG 60

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V    I      +V                +Y  +          +   LY         
Sbjct: 61  VEASTIVRIHDEYVYSRYKKAATEEQQTASQYSVLREASSYFPEMDGIGLYKTLQTYFDS 120

Query: 121 SHDMMTT 127
              +   
Sbjct: 121 WTSLAQK 127


>gi|304310787|ref|YP_003810385.1| Flagellar basal body FlaE [gamma proteobacterium HdN1]
 gi|301796520|emb|CBL44728.1| Flagellar basal body FlaE [gamma proteobacterium HdN1]
          Length = 447

 Score = 48.3 bits (113), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 15/100 (15%), Positives = 34/100 (34%)

Query: 32  ARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVK 91
           A + G T              + +   G    K+          E          +G ++
Sbjct: 347 AYSNGQTVSVGKVALARFPNPQGLSQIGNTSWKETSASGEALAGEAGTSSYGLIRAGALE 406

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             NV++  E   +    R + AN ++I+ ++ +    ++L
Sbjct: 407 VSNVDLTTELVGLITAQRNFQANAKSIETTNTVTNAIINL 446



 Score = 42.9 bits (99), Expect = 0.016,   Method: Composition-based stats.
 Identities = 22/125 (17%), Positives = 38/125 (30%), Gaps = 5/125 (4%)

Query: 7   SAHIANSGLAVQSARMQIISENIANARTTGDTP-----GSDPYRRKTISFEEVMHGSGGV 61
           S +IA SGL    + +++ S NIAN  TTG        G         S +  +     +
Sbjct: 2   SFNIAISGLKAAQSDLEVTSNNIANVATTGFKKSRAEFGDIYATGAFGSTKTAIGSGVLL 61

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
           +      +Q       +      +  G           E    R       A+   +  S
Sbjct: 62  QAVSQQFNQGNMNFTQNTLDFGVSGEGFFVMSPNIGSSERIYTRAGAFGVNADGNVVNSS 121

Query: 122 HDMMT 126
             ++ 
Sbjct: 122 DQLLQ 126


>gi|186477697|ref|YP_001859167.1| flagellar basal body FlaE domain-containing protein [Burkholderia
           phymatum STM815]
 gi|184194156|gb|ACC72121.1| flagellar basal body FlaE domain protein [Burkholderia phymatum
           STM815]
          Length = 501

 Score = 48.3 bits (113), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 40/109 (36%), Gaps = 4/109 (3%)

Query: 23  QIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHP 82
            II+ N +N    G T         T + +  +   G  + +         V      + 
Sbjct: 397 GIITGNYSN----GQTAALGQVALATFANQNGLINLGNNQFQATAASGVAVVAAPGSTNH 452

Query: 83  VANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            +   G  +  NV++  E  ++    R Y AN QTIK    +  T ++L
Sbjct: 453 GSLQGGATENSNVDLTSELVNLITAQRNYQANAQTIKTQQTVDQTLINL 501


>gi|94263193|ref|ZP_01287010.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
 gi|93456411|gb|EAT06531.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
          Length = 619

 Score = 48.3 bits (113), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 31/78 (39%)

Query: 55  MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
           +  +     K   +     +     G         ++  NV++  E +D+  T R++ AN
Sbjct: 542 LEPTSHNAYKATAMAGEPTIGVAGEGSFGKVLGNTLEGSNVDLGREFSDLIMTQRIFQAN 601

Query: 115 LQTIKQSHDMMTTTLDLL 132
            ++I  + ++  T + L 
Sbjct: 602 SKSITTADEVFDTLMRLK 619



 Score = 33.7 bits (75), Expect = 8.3,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 36/109 (33%), Gaps = 2/109 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-G 60
             L        SGL   S  M ++ +NIAN  TT        ++    S +E     G G
Sbjct: 1   MSLHNMIFNGVSGLNSMSGNMAVMGDNIANVNTTSYKSSQASFQNILTSSQERFGEIGNG 60

Query: 61  VRVKKIGVDQSTFVEE-FDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +V  I  +      E  +    +A +       N  +  E    R+  
Sbjct: 61  SQVAAITKNFRPGDLETTNQSTDMAISGKGFFMVNNPLADEMLYTRDGQ 109


>gi|219670133|ref|YP_002460568.1| hypothetical protein Dhaf_4123 [Desulfitobacterium hafniense DCB-2]
 gi|219540393|gb|ACL22132.1| protein of unknown function DUF1078 domain protein
           [Desulfitobacterium hafniense DCB-2]
          Length = 329

 Score = 48.3 bits (113), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 18/44 (40%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  NVN+     +M +  R Y  N + I     M +    L R
Sbjct: 286 LEQSNVNLASAMTEMIQVQRAYQLNARMITNGDQMWSMANSLRR 329



 Score = 37.5 bits (85), Expect = 0.54,   Method: Composition-based stats.
 Identities = 9/70 (12%), Positives = 22/70 (31%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          +   + A +G+  Q   + ++  N++N  T G       +     +           +  
Sbjct: 1  MRILNTAATGVRAQQTALDVLGNNMSNVNTPGYKAQRVNFAEALAAEMRPAEREFNGQPV 60

Query: 65 KIGVDQSTFV 74
             +D    V
Sbjct: 61 GERIDVGAGV 70


>gi|219670131|ref|YP_002460566.1| hypothetical protein Dhaf_4121 [Desulfitobacterium hafniense DCB-2]
 gi|219540391|gb|ACL22130.1| protein of unknown function DUF1078 domain protein
           [Desulfitobacterium hafniense DCB-2]
          Length = 251

 Score = 48.3 bits (113), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 22/52 (42%), Gaps = 1/52 (1%)

Query: 83  VANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD-LLR 133
            A   G ++  NVN+  +   M    R Y AN + I+     +   ++ + R
Sbjct: 198 EAVLQGTLEGSNVNLPGQMVKMITVMRAYEANQKVIQTHDATLEKAVNEIGR 249


>gi|330961197|gb|EGH61457.1| flagellar hook protein FlgE [Pseudomonas syringae pv. maculicola
           str. ES4326]
          Length = 582

 Score = 48.3 bits (113), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 17/41 (41%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           ++  NV +  E   + +    Y AN + I     +M T + 
Sbjct: 540 LEGSNVVLADELIALIQAQTAYQANSKAISTEVTLMQTLIQ 580



 Score = 33.7 bits (75), Expect = 9.4,   Method: Composition-based stats.
 Identities = 11/36 (30%), Positives = 17/36 (47%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSD 42
          S + A SG+   + R+++   NIAN  T G      
Sbjct: 2  SFNTAISGIHAANKRLEVAGNNIANVGTLGFKSSRA 37


>gi|114567879|ref|YP_755033.1| flagellar basal-body rod protein (flgG-2) [Syntrophomonas wolfei
           subsp. wolfei str. Goettingen]
 gi|114338814|gb|ABI69662.1| flagellar basal-body rod protein (flgG-2) [Syntrophomonas wolfei
           subsp. wolfei str. Goettingen]
          Length = 246

 Score = 48.3 bits (113), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 22/57 (38%)

Query: 74  VEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            EE           G ++  NVN + E   +    R Y +  + ++   ++M   +D
Sbjct: 184 PEEPYVMERPEMLQGYIEQSNVNAVKEMVTLISVVRAYESLQKMVQAEDEIMGQAID 240


>gi|182418344|ref|ZP_02949639.1| flagellar hook-associated protein FlgK [Clostridium butyricum 5521]
 gi|237666652|ref|ZP_04526637.1| flagellar hook-associated protein FlgK [Clostridium butyricum E4
           str. BoNT E BL5262]
 gi|182377726|gb|EDT75270.1| flagellar hook-associated protein FlgK [Clostridium butyricum 5521]
 gi|237657851|gb|EEP55406.1| flagellar hook-associated protein FlgK [Clostridium butyricum E4
           str. BoNT E BL5262]
          Length = 610

 Score = 48.3 bits (113), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 16/107 (14%), Positives = 32/107 (29%), Gaps = 15/107 (14%)

Query: 28  NIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANAS 87
           N+AN   TG           +     V      +  +   +                   
Sbjct: 518 NLANKDGTGSKLSDYYASTISKLASNVSKAKSDLSTQNTLLANLENQR------------ 565

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD-LLR 133
             +    V++  E AD+ +    Y AN + I    +++   ++ L R
Sbjct: 566 --LSESGVSLDEEMADLIQFQHSYQANAKMINTVDELLDVVINGLKR 610



 Score = 42.2 bits (97), Expect = 0.023,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 21/50 (42%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS 50
          M  L  +  +A  GL+VQ   +   S N+AN++T G +            
Sbjct: 1  MAGLFDTFTVAKRGLSVQQGNINTTSHNLANSQTAGYSRQRAVVETTRPF 50


>gi|254973892|ref|ZP_05270364.1| putative flagellar hook-associated protein [Clostridium difficile
           QCD-66c26]
 gi|255091277|ref|ZP_05320755.1| putative flagellar hook-associated protein [Clostridium difficile
           CIP 107932]
 gi|255312936|ref|ZP_05354519.1| putative flagellar hook-associated protein [Clostridium difficile
           QCD-76w55]
 gi|255515695|ref|ZP_05383371.1| putative flagellar hook-associated protein [Clostridium difficile
           QCD-97b34]
 gi|255648789|ref|ZP_05395691.1| putative flagellar hook-associated protein [Clostridium difficile
           QCD-37x79]
 gi|260682009|ref|YP_003213294.1| putative flagellar hook-associated protein [Clostridium difficile
           CD196]
 gi|260685607|ref|YP_003216740.1| putative flagellar hook-associated protein [Clostridium difficile
           R20291]
 gi|260208172|emb|CBA60493.1| putative flagellar hook-associated protein [Clostridium difficile
           CD196]
 gi|260211623|emb|CBE01861.1| putative flagellar hook-associated protein [Clostridium difficile
           R20291]
          Length = 436

 Score = 48.3 bits (113), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 22/107 (20%), Positives = 38/107 (35%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M  L +  + ANSG+      +Q IS NI+N  T G +     +   +  +   +  S  
Sbjct: 1   MAGLFSILNTANSGMNAHQKAIQTISHNISNLDTDGYSRQRTEFATNSPMYMPSLSNSIA 60

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                 GV  +      +  +     +   KY N     +  +  ET
Sbjct: 61  RGQLGTGVHVTDVTRARNSFYDYQFRAEAHKYGNTVSKYDYYNTIET 107



 Score = 42.6 bits (98), Expect = 0.018,   Method: Composition-based stats.
 Identities = 5/38 (13%), Positives = 18/38 (47%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             V++  E  ++ +  R Y A+ + +  +  ++   ++
Sbjct: 396 SGVSLDEEMTELIKIQRSYQASAKVMSTAVQLLDVVIN 433


>gi|224436455|ref|ZP_03657469.1| flagellar hook protein FlgE [Helicobacter cinaedi CCUG 18818]
 gi|313142967|ref|ZP_07805160.1| flagellar hook protein FlgE [Helicobacter cinaedi CCUG 18818]
 gi|313127998|gb|EFR45615.1| flagellar hook protein FlgE [Helicobacter cinaedi CCUG 18818]
          Length = 745

 Score = 48.3 bits (113), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 19/45 (42%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NV+V     ++    R Y  N +      D++   L+L R
Sbjct: 701 HLETSNVDVGNALTELIVMQRGYSMNAKAFTTGDDLVKEALNLKR 745


>gi|226225705|ref|YP_002759811.1| flagellar hook-associated protein 1 [Gemmatimonas aurantiaca T-27]
 gi|226088896|dbj|BAH37341.1| flagellar hook-associated protein 1 [Gemmatimonas aurantiaca T-27]
          Length = 482

 Score = 48.3 bits (113), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 35/121 (28%), Gaps = 13/121 (10%)

Query: 24  IISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPV 83
           I + N AN  T+  T  +    R           +G              V         
Sbjct: 361 IAASNDANGPTSNGTAQALAALRIADGTVTWTAPNGTTESGSFVGFFRGLVTRLGVDTAS 420

Query: 84  ANASGIVKY-------------PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           AN S  V                 VN   E  +M    + Y A  + I  + +M+ T ++
Sbjct: 421 ANDSAAVAENLVQQAEIRRQSVSGVNTDEELVNMLRVQQSYQAAAKMITAADEMLKTLIN 480

Query: 131 L 131
           L
Sbjct: 481 L 481



 Score = 36.4 bits (82), Expect = 1.3,   Method: Composition-based stats.
 Identities = 18/59 (30%), Positives = 22/59 (37%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
            IA S L      +Q IS N+ANA T G +         T       +   GV V  I
Sbjct: 6  FSIARSALLSHQTALQTISHNVANAETPGFSRQEAVLAANTPVRLYNGNVGTGVHVATI 64


>gi|90422996|ref|YP_531366.1| hypothetical protein RPC_1485 [Rhodopseudomonas palustris BisB18]
 gi|90105010|gb|ABD87047.1| protein of unknown function DUF1078-like [Rhodopseudomonas
           palustris BisB18]
          Length = 599

 Score = 48.3 bits (113), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 24/44 (54%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  N ++  E   +  T + Y AN + I  ++ M++  L+++R
Sbjct: 556 LEASNTDIADEFTKLIVTQQAYSANTKVITTANTMVSDLLNVIR 599


>gi|167579488|ref|ZP_02372362.1| flagellar hook protein FlgE [Burkholderia thailandensis TXDOH]
          Length = 413

 Score = 48.3 bits (113), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 13/83 (15%), Positives = 29/83 (34%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +    +   G  +  +        +      +        ++  NV++  +  ++    
Sbjct: 331 FNNPNGLVNVGNNQYVETAASGVPQISAPGSTNHGTLQGSALENSNVDLTSQLVNLITAQ 390

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y AN QTIK    +  T ++L
Sbjct: 391 RNYQANAQTIKTQQTVDQTLINL 413


>gi|255322686|ref|ZP_05363830.1| flagellar hook-associated protein FlgK [Campylobacter showae
          RM3277]
 gi|255300247|gb|EET79520.1| flagellar hook-associated protein FlgK [Campylobacter showae
          RM3277]
          Length = 617

 Score = 48.3 bits (113), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 15/73 (20%), Positives = 24/73 (32%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  + +S HI  SGL     ++     NI NA +   T        +    +       G
Sbjct: 1  MANIFSSLHIGVSGLDAAQTQITTTGHNITNADSEHYTRQRVVQSAREPFHDMPGDIGTG 60

Query: 61 VRVKKIGVDQSTF 73
           +V  +      F
Sbjct: 61 TKVDTVVRVHDEF 73



 Score = 40.2 bits (92), Expect = 0.096,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 17/48 (35%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            S       VN+  E  ++      Y A  + I     M+ T L L +
Sbjct: 570 MSEYQSVSGVNLNEELTNLIRFQSSYGAAAKIITTVEKMLDTLLTLKQ 617


>gi|256830170|ref|YP_003158898.1| flagellar hook-associated protein FlgK [Desulfomicrobium baculatum
           DSM 4028]
 gi|256579346|gb|ACU90482.1| flagellar hook-associated protein FlgK [Desulfomicrobium baculatum
           DSM 4028]
          Length = 697

 Score = 48.3 bits (113), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 19/113 (16%), Positives = 34/113 (30%), Gaps = 2/113 (1%)

Query: 22  MQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGH 81
           M      +A A     T           +  + +       V K G D  +     +   
Sbjct: 584 MNAGDNTMAAAIAALQTKAVATRTVTEGTTRQTLGEYYSTLVAKAGSDTQSAKFNAEYQE 643

Query: 82  PVANASGIVKYP--NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
            +AN     +     VN+  E  ++ +    Y A  + I  +  M+   L L 
Sbjct: 644 ALANDLKSRQESVSGVNLDEEMTNLIKFQHAYTAAAKLITTAESMLEVLLGLK 696



 Score = 39.9 bits (91), Expect = 0.13,   Method: Composition-based stats.
 Identities = 16/108 (14%), Positives = 32/108 (29%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M  + +  +I    L    A ++++  NI+NA T G +  +  +               G
Sbjct: 1   MPGIASLFNIGKQSLFANQAAIEVVGNNISNANTEGYSRQAVRFEDGYYISYSPGQLGTG 60

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
           V   ++      F E                Y N+  +    +     
Sbjct: 61  VNAAEVIRYFDEFTEVMYNTKSSEQQRWQKLYENLQNVEMIFNESNAQ 108


>gi|217032455|ref|ZP_03437948.1| hypothetical protein HPB128_175g16 [Helicobacter pylori B128]
 gi|298736140|ref|YP_003728665.1| flagellar hook protein FlgE [Helicobacter pylori B8]
 gi|216945863|gb|EEC24483.1| hypothetical protein HPB128_175g16 [Helicobacter pylori B128]
 gi|298355329|emb|CBI66201.1| flagellar hook protein FlgE [Helicobacter pylori B8]
          Length = 605

 Score = 48.3 bits (113), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 17/45 (37%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NVN      ++    R Y  N +      DM+   + L +
Sbjct: 561 YLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEAISLKK 605


>gi|322380594|ref|ZP_08054746.1| flagellar hook-associated protein FlgK [Helicobacter suis HS5]
 gi|321146916|gb|EFX41664.1| flagellar hook-associated protein FlgK [Helicobacter suis HS5]
          Length = 606

 Score = 47.9 bits (112), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 17/106 (16%), Positives = 30/106 (28%), Gaps = 2/106 (1%)

Query: 29  IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI--GVDQSTFVEEFDPGHPVANA 86
           +AN          D Y+ K       +       V KI    + +    +          
Sbjct: 500 VANMMQQLQYDKVDFYQNKFNDKPMTIEEYYQFVVGKIHTEAEHAKNTLDSKEAVLHVVK 559

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
                   V+   E  ++ +    Y AN + I     M+ T L + 
Sbjct: 560 KEQEAISGVSSDEEMVNLIKFQSGYAANAKVITAIDRMIETLLGIK 605



 Score = 44.1 bits (102), Expect = 0.006,   Method: Composition-based stats.
 Identities = 14/74 (18%), Positives = 29/74 (39%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  +++S + + +GL      + +   NI+NA     +        ++       + + G
Sbjct: 1  MGGILSSLNTSYTGLQAHQVMVDVTGNNISNANDPFYSRQRVIATPQSTLMYTNRNMNMG 60

Query: 61 VRVKKIGVDQSTFV 74
          V V+ I      FV
Sbjct: 61 VNVQSIQRVHDDFV 74


>gi|188587424|ref|YP_001918969.1| protein of unknown function DUF1078 domain protein [Natranaerobius
           thermophilus JW/NM-WN-LF]
 gi|179352111|gb|ACB86381.1| protein of unknown function DUF1078 domain protein [Natranaerobius
           thermophilus JW/NM-WN-LF]
          Length = 280

 Score = 47.9 bits (112), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 21/45 (46%), Gaps = 1/45 (2%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD-LLR 133
           ++  NVN + E   M    R Y +N + I+   D +   ++ + R
Sbjct: 233 IESSNVNSVDEMTGMINALRAYESNQRAIQGHDDTLERAVNDIGR 277


>gi|187925761|ref|YP_001897403.1| hypothetical protein Bphyt_3791 [Burkholderia phytofirmans PsJN]
 gi|187716955|gb|ACD18179.1| protein of unknown function DUF1078 domain protein [Burkholderia
           phytofirmans PsJN]
          Length = 503

 Score = 47.9 bits (112), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 15/46 (32%), Positives = 23/46 (50%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             G V+  NV++  E  ++    R Y AN QTIK    +  T ++L
Sbjct: 458 QGGAVENSNVDLTSELVNLITAQRNYQANAQTIKTQQTVDQTLINL 503


>gi|327441420|dbj|BAK17785.1| flagellar basal body rod protein [Solibacillus silvestris StLB046]
          Length = 279

 Score = 47.9 bits (112), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 11/52 (21%), Positives = 21/52 (40%)

Query: 80  GHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
              V    G ++  NV+V  E  ++ +  R Y  N + I  +  M+     +
Sbjct: 227 NRQVGVQKGALEMSNVDVSKEMTNLIQAQRSYQFNTRAITIADQMLGLINGI 278


>gi|328545491|ref|YP_004305600.1| flagellar basal body FlaE [polymorphum gilvum SL003B-26A1]
 gi|326415232|gb|ADZ72295.1| Flagellar basal body FlaE [Polymorphum gilvum SL003B-26A1]
          Length = 424

 Score = 47.9 bits (112), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 24/44 (54%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  NV++  E   M E+ R Y AN +  K   D++   ++L+R
Sbjct: 381 LESSNVDLASELTSMIESQRGYTANSKVFKAGSDLLEELVNLVR 424



 Score = 44.9 bits (104), Expect = 0.004,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 31/65 (47%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            L        SG+  QS+++  +++NIAN+ TTG    +  +    +S     + SGGV
Sbjct: 1  MSLYGVMRTGVSGMNAQSSKLGTVADNIANSSTTGYKRAASEFSSMILSQGTGTYNSGGV 60

Query: 62 RVKKI 66
          +   +
Sbjct: 61 KAHTV 65


>gi|330943208|gb|EGH45615.1| flagellar hook protein FlgE [Pseudomonas syringae pv. pisi str.
           1704B]
          Length = 565

 Score = 47.9 bits (112), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 17/41 (41%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           ++  NV +  E   + +    Y AN + I     +M T + 
Sbjct: 523 LEGSNVVLADELIALIQAQTAYQANSKAISTEVTLMQTLIQ 563


>gi|322378745|ref|ZP_08053174.1| flagellar hook-associated protein FlgK [Helicobacter suis HS1]
 gi|321148775|gb|EFX43246.1| flagellar hook-associated protein FlgK [Helicobacter suis HS1]
          Length = 606

 Score = 47.9 bits (112), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 17/106 (16%), Positives = 30/106 (28%), Gaps = 2/106 (1%)

Query: 29  IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI--GVDQSTFVEEFDPGHPVANA 86
           +AN          D Y+ K       +       V KI    + +    +          
Sbjct: 500 VANMMQQLQYDKVDFYQNKFNDKPMTIEEYYQFVVGKIHTEAEHAKNTLDSKEAVLHVVK 559

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
                   V+   E  ++ +    Y AN + I     M+ T L + 
Sbjct: 560 KEQEAISGVSSDEEMVNLIKFQSGYAANAKVITAIDRMIETLLGIK 605



 Score = 44.1 bits (102), Expect = 0.006,   Method: Composition-based stats.
 Identities = 14/74 (18%), Positives = 29/74 (39%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  +++S + + +GL      + +   NI+NA     +        ++       + + G
Sbjct: 1  MGGILSSLNTSYTGLQAHQVMVDVTGNNISNANDPFYSRQRVIATPQSTLMYTNRNMNMG 60

Query: 61 VRVKKIGVDQSTFV 74
          V V+ I      FV
Sbjct: 61 VNVQSIQRVHDDFV 74


>gi|15644291|ref|NP_229343.1| flagellar basal-body rod protein FlgF [Thermotoga maritima MSB8]
 gi|170288995|ref|YP_001739233.1| hypothetical protein TRQ2_1206 [Thermotoga sp. RQ2]
 gi|281412685|ref|YP_003346764.1| flagellar basal-body rod protein FlgF [Thermotoga naphthophila
           RKU-10]
 gi|4982110|gb|AAD36610.1|AE001800_20 flagellar basal-body rod protein FlgF [Thermotoga maritima MSB8]
 gi|170176498|gb|ACB09550.1| protein of unknown function DUF1078 domain protein [Thermotoga sp.
           RQ2]
 gi|281373788|gb|ADA67350.1| flagellar basal-body rod protein FlgF [Thermotoga naphthophila
           RKU-10]
          Length = 249

 Score = 47.9 bits (112), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 10/54 (18%), Positives = 20/54 (37%)

Query: 77  FDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             P        G V+  NV+ L    DM    R Y  + + +  + ++    ++
Sbjct: 190 PSPSENFRIMQGYVEKSNVDALKAMVDMISAMRHYELSQRAVTVNDELNGKLIN 243


>gi|332533175|ref|ZP_08409044.1| flagellar hook protein FlgE [Pseudoalteromonas haloplanktis
           ANT/505]
 gi|332037457|gb|EGI73911.1| flagellar hook protein FlgE [Pseudoalteromonas haloplanktis
           ANT/505]
          Length = 455

 Score = 47.9 bits (112), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 14/84 (16%), Positives = 28/84 (33%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                + +   G    K+          E   G      S  ++  N N+  E  D+   
Sbjct: 371 RFPNSQGLSQVGDTSWKQSIDSGEPVAGEAGSGTFGGINSSALEQSNTNLTNELVDLITA 430

Query: 108 NRLYMANLQTIKQSHDMMTTTLDL 131
            R Y AN + ++ +  +  + L +
Sbjct: 431 QRNYQANSRALEVNSTIQQSILQI 454



 Score = 40.6 bits (93), Expect = 0.076,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 19/39 (48%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          S +IA +GLA     + + + NIAN  TTG       + 
Sbjct: 2  SFNIALTGLAAAQKDLDVTANNIANVNTTGFKESRAEFA 40


>gi|308183061|ref|YP_003927188.1| flagellar hook protein FlgE [Helicobacter pylori PeCan4]
 gi|308065246|gb|ADO07138.1| flagellar hook protein FlgE [Helicobacter pylori PeCan4]
          Length = 605

 Score = 47.9 bits (112), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 17/45 (37%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NVN      ++    R Y  N +      DM+   + L +
Sbjct: 561 YLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEAISLKK 605


>gi|330972414|gb|EGH72480.1| flagellar hook protein FlgE [Pseudomonas syringae pv. aceris str.
           M302273PT]
          Length = 582

 Score = 47.9 bits (112), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 17/41 (41%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           ++  NV +  E   + +    Y AN + I     +M T + 
Sbjct: 540 LEGSNVVLADELIALIQAQTAYQANSKAISTEVTLMQTLIQ 580



 Score = 33.3 bits (74), Expect = 10.0,   Method: Composition-based stats.
 Identities = 11/36 (30%), Positives = 17/36 (47%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSD 42
          S + A SG+   + R+++   NIAN  T G      
Sbjct: 2  SFNTAISGIHAANKRLEVAGNNIANVGTLGFKSSRA 37


>gi|300854137|ref|YP_003779121.1| Flagellar hook-associated protein [Clostridium ljungdahlii DSM
          13528]
 gi|300434252|gb|ADK14019.1| Flagellar hook-associated protein [Clostridium ljungdahlii DSM
          13528]
          Length = 638

 Score = 47.9 bits (112), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 21/78 (26%), Positives = 29/78 (37%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  L +  + A SGL  Q   + + S NIANA T G +         T      + G+ G
Sbjct: 1  MPGLFSIFNTAKSGLFAQQTAINVTSHNIANANTDGYSRQRADMETTTPYTLPSVDGAAG 60

Query: 61 VRVKKIGVDQSTFVEEFD 78
                GV   +     D
Sbjct: 61 AGQLGTGVTVDSIERIRD 78



 Score = 46.4 bits (108), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/127 (13%), Positives = 44/127 (34%), Gaps = 2/127 (1%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
            +ANS + +          ++       D+  ++ Y    +     +       V K+G 
Sbjct: 511 QLANSLMNIGGITSDSSRSDLLKNIFKSDSTINNVYSVGKVDGGSTLDNYFNDLVNKVGN 570

Query: 69  DQSTFVEEFDPGHPVANASGIVKYPN--VNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
            +    +  D       +    +  N  V++  E  ++ +    Y AN + I    +++ 
Sbjct: 571 HEQEAKQTLDTQSVQLQSYTQSREANSGVSIDEEMTNLIQFQHCYQANAKMISTVDELLD 630

Query: 127 TTLDLLR 133
             ++ L+
Sbjct: 631 VVINQLK 637


>gi|297380105|gb|ADI34992.1| flagellar hook protein FlgE [Helicobacter pylori v225d]
 gi|308062226|gb|ADO04114.1| flagellar hook protein FlgE [Helicobacter pylori Cuz20]
 gi|308063738|gb|ADO05625.1| flagellar hook protein FlgE [Helicobacter pylori Sat464]
 gi|317178740|dbj|BAJ56528.1| flagellar hook protein FlgE [Helicobacter pylori F30]
          Length = 605

 Score = 47.9 bits (112), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 17/45 (37%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NVN      ++    R Y  N +      DM+   + L +
Sbjct: 561 YLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEAISLKK 605


>gi|66046706|ref|YP_236547.1| flagellar basal body rod protein:protein of unknown function
           DUF1078:flagellar basal body FlaE [Pseudomonas syringae
           pv. syringae B728a]
 gi|63257413|gb|AAY38509.1| Flagellar basal body rod protein:Protein of unknown function
           DUF1078:Flagellar basal body FlaE [Pseudomonas syringae
           pv. syringae B728a]
          Length = 582

 Score = 47.9 bits (112), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 17/41 (41%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           ++  NV +  E   + +    Y AN + I     +M T + 
Sbjct: 540 LEGSNVVLADELIALIQAQTAYQANSKAISTEVTLMQTLIQ 580



 Score = 33.3 bits (74), Expect = 10.0,   Method: Composition-based stats.
 Identities = 11/36 (30%), Positives = 17/36 (47%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSD 42
          S + A SG+   + R+++   NIAN  T G      
Sbjct: 2  SFNTAISGIHAANKRLEVAGNNIANVGTLGFKSSRA 37


>gi|22127327|ref|NP_670750.1| flagellar hook protein FlgE [Yersinia pestis KIM 10]
 gi|45442796|ref|NP_994335.1| flagellar hook protein FlgE [Yersinia pestis biovar Microtus str.
           91001]
 gi|108809055|ref|YP_652971.1| flagellar hook protein FlgE [Yersinia pestis Antiqua]
 gi|108810748|ref|YP_646515.1| flagellar hook protein FlgE [Yersinia pestis Nepal516]
 gi|145597817|ref|YP_001161893.1| flagellar hook protein FlgE [Yersinia pestis Pestoides F]
 gi|150260249|ref|ZP_01916977.1| lateral flagellar hook protein [Yersinia pestis CA88-4125]
 gi|162421081|ref|YP_001604847.1| flagellar hook protein FlgE [Yersinia pestis Angola]
 gi|165924960|ref|ZP_02220792.1| flagellar hook protein [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165939066|ref|ZP_02227618.1| flagellar hook protein [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|166008888|ref|ZP_02229786.1| flagellar hook protein [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166211930|ref|ZP_02237965.1| flagellar hook protein [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167399572|ref|ZP_02305096.1| flagellar hook protein [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167419268|ref|ZP_02311021.1| flagellar hook protein [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167425161|ref|ZP_02316914.1| flagellar hook protein [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|167466340|ref|ZP_02331044.1| flagellar hook protein [Yersinia pestis FV-1]
 gi|218927912|ref|YP_002345787.1| flagellar hook protein FlgE [Yersinia pestis CO92]
 gi|229837408|ref|ZP_04457571.1| Flagellar hook protein flgE [Yersinia pestis Pestoides A]
 gi|229840621|ref|ZP_04460780.1| Flagellar hook protein flgE [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229842828|ref|ZP_04462980.1| Flagellar hook protein flgE [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229900945|ref|ZP_04516069.1| Flagellar hook protein flgE [Yersinia pestis Nepal516]
 gi|270487673|ref|ZP_06204747.1| flagellar hook protein FlgE [Yersinia pestis KIM D27]
 gi|294502788|ref|YP_003566850.1| flagellar hook protein [Yersinia pestis Z176003]
 gi|21960408|gb|AAM87001.1|AE013948_9 putative flagellar hook protein [Yersinia pestis KIM 10]
 gi|45437662|gb|AAS63212.1| flagellar hook protein FlgE [Yersinia pestis biovar Microtus str.
           91001]
 gi|108774396|gb|ABG16915.1| flagellar hook protein [Yersinia pestis Nepal516]
 gi|108780968|gb|ABG15026.1| putative flagellar hook protein [Yersinia pestis Antiqua]
 gi|115346523|emb|CAL19399.1| putative flagellar hook protein [Yersinia pestis CO92]
 gi|145209513|gb|ABP38920.1| flagellar hook protein [Yersinia pestis Pestoides F]
 gi|149289657|gb|EDM39734.1| lateral flagellar hook protein [Yersinia pestis CA88-4125]
 gi|162353896|gb|ABX87844.1| flagellar hook protein [Yersinia pestis Angola]
 gi|165913022|gb|EDR31647.1| flagellar hook protein [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|165923160|gb|EDR40311.1| flagellar hook protein [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165992227|gb|EDR44528.1| flagellar hook protein [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166206676|gb|EDR51156.1| flagellar hook protein [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|166963262|gb|EDR59283.1| flagellar hook protein [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167052076|gb|EDR63484.1| flagellar hook protein [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167055924|gb|EDR65705.1| flagellar hook protein [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|229682284|gb|EEO78376.1| Flagellar hook protein flgE [Yersinia pestis Nepal516]
 gi|229690095|gb|EEO82152.1| Flagellar hook protein flgE [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229696987|gb|EEO87034.1| Flagellar hook protein flgE [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229705531|gb|EEO91541.1| Flagellar hook protein flgE [Yersinia pestis Pestoides A]
 gi|262360820|gb|ACY57541.1| flagellar hook protein [Yersinia pestis D106004]
 gi|270336177|gb|EFA46954.1| flagellar hook protein FlgE [Yersinia pestis KIM D27]
 gi|294353247|gb|ADE63588.1| flagellar hook protein [Yersinia pestis Z176003]
 gi|320016711|gb|ADW00283.1| Flagellar hook protein flgE [Yersinia pestis biovar Medievalis str.
           Harbin 35]
          Length = 413

 Score = 47.9 bits (112), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 21/47 (44%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
            SG ++  NV++  E   +    R Y A+ + I  +  MM     +L
Sbjct: 367 ESGALENSNVDITAELVGLMTAQRNYQASTKIISTNDSMMNALFQVL 413



 Score = 39.5 bits (90), Expect = 0.16,   Method: Composition-based stats.
 Identities = 19/65 (29%), Positives = 26/65 (40%), Gaps = 5/65 (7%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          S  IAN+ L   + ++  IS NIAN+ T G         R   S         GV V  +
Sbjct: 2  SFSIANTALNAHTEQLNTISNNIANSATKGFKA-----SRTEFSSMYAQSQPLGVAVSGV 56

Query: 67 GVDQS 71
            + S
Sbjct: 57 SQNIS 61


>gi|317012896|gb|ADU83504.1| flagellar hook-associated protein FlgK [Helicobacter pylori
           Lithuania75]
          Length = 606

 Score = 47.9 bits (112), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 20/119 (16%), Positives = 34/119 (28%), Gaps = 4/119 (3%)

Query: 19  SARMQIISEN--IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEE 76
              +  I+ N  +AN          D Y  K       +         KI  D       
Sbjct: 488 RPWLAPINGNFDVANMMQQLQYDSVDFYNDKFDIKPMKISEFYQFLTGKINTDAEKSGRI 547

Query: 77  FDPGHPV--ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            D    +        +    V+V  E  ++ +    Y AN + I     M+   L + +
Sbjct: 548 LDTKKSMLETIKKEQLSISQVSVDEEMLNLIKFQSGYAANAKVITAIDRMIDALLGIKQ 606



 Score = 44.5 bits (103), Expect = 0.004,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 40/111 (36%), Gaps = 9/111 (8%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M  +++S + + +GL    + + +   NI+NA         + Y R+ +  +       G
Sbjct: 1   MGGILSSLNTSYTGLQAHQSMVDVTGNNISNASD-------EFYSRQRVIAKPQAAYMYG 53

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
            +   +GVD        D            +  N     E + ++E +  +
Sbjct: 54  TKNVNMGVDVEAIERVHDEFVFARYTKANYE--NTYYDTEFSHLKEASAYF 102


>gi|308184693|ref|YP_003928826.1| flagellar hook protein FlgE [Helicobacter pylori SJM180]
 gi|308060613|gb|ADO02509.1| flagellar hook protein FlgE [Helicobacter pylori SJM180]
          Length = 605

 Score = 47.9 bits (112), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 17/45 (37%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NVN      ++    R Y  N +      DM+   + L +
Sbjct: 561 YLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEAISLKK 605


>gi|15642858|ref|NP_227899.1| flagellar hook-associated protein 1 [Thermotoga maritima MSB8]
 gi|4980572|gb|AAD35177.1|AE001695_3 flagellar hook-associated protein 1 [Thermotoga maritima MSB8]
          Length = 858

 Score = 47.9 bits (112), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 15/103 (14%), Positives = 35/103 (33%), Gaps = 1/103 (0%)

Query: 30  ANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK-KIGVDQSTFVEEFDPGHPVANASG 88
           AN             +  +   E      GGV  +  +  + ++ ++           + 
Sbjct: 754 ANPELLETIQNLYTRKMLSNGKESFYEFFGGVVSELGVEAETASNLKNNTEILRQEIDNA 813

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             +   V++  E A+M E    + A  + I     M+ T +++
Sbjct: 814 REEVKGVSLDEEMANMIEYQHAFSAAAKVITAVDQMIQTVINM 856



 Score = 42.2 bits (97), Expect = 0.023,   Method: Composition-based stats.
 Identities = 18/108 (16%), Positives = 32/108 (29%), Gaps = 7/108 (6%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV------- 54
             +    + A +G+      M I+  NIANA T G +                       
Sbjct: 4   MSMFGILNTALTGIHAHKLAMNIVGHNIANASTPGYSRQRPVIEANPPIPLTTLTQPSFP 63

Query: 55  MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETA 102
           +    G RVK I   +  F++                  N++ + +  
Sbjct: 64  LQMGTGARVKTIVRLRDAFLDVQYRQVNNRYNYWDTVLSNLHFIEQLL 111


>gi|317012717|gb|ADU83325.1| flagellar hook protein FlgE [Helicobacter pylori Lithuania75]
          Length = 605

 Score = 47.9 bits (112), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 17/45 (37%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NVN      ++    R Y  N +      DM+   + L +
Sbjct: 561 YLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEAISLKK 605


>gi|315649859|ref|ZP_07902942.1| fagellar hook-basal body protein [Paenibacillus vortex V453]
 gi|315274833|gb|EFU38214.1| fagellar hook-basal body protein [Paenibacillus vortex V453]
          Length = 281

 Score = 47.9 bits (112), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 10/66 (15%), Positives = 22/66 (33%), Gaps = 1/66 (1%)

Query: 69  DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
           D    V    P        G ++  NV+      ++    R Y  N + ++     +   
Sbjct: 215 DPDGEVRFMTPADNGVVRQGFIEGSNVDPTQSMVELTAALRAYETNQKIVQYYDRTLEKA 274

Query: 129 LD-LLR 133
           ++ + R
Sbjct: 275 VNEIGR 280


>gi|220922287|ref|YP_002497589.1| flagellar basal body FlaE domain-containing protein
           [Methylobacterium nodulans ORS 2060]
 gi|219946894|gb|ACL57286.1| flagellar basal body FlaE domain protein [Methylobacterium nodulans
           ORS 2060]
          Length = 456

 Score = 47.9 bits (112), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 24/46 (52%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G V+  N +   E + +  T + Y AN + +  +  MMT  ++++R
Sbjct: 411 GNVEQSNTDTANEFSKLIITQQAYSANTRVMSTAQQMMTDLINIIR 456



 Score = 40.2 bits (92), Expect = 0.10,   Method: Composition-based stats.
 Identities = 15/43 (34%), Positives = 22/43 (51%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
            + ++   A SGL  Q+  +  IS NIANA+TTG       +
Sbjct: 1  MDVFSALQTAVSGLKAQAFSLDNISGNIANAQTTGYRRIDTTF 43


>gi|108563315|ref|YP_627631.1| flagellar hook protein FlgE [Helicobacter pylori HPAG1]
 gi|107837088|gb|ABF84957.1| flagellar hook protein [Helicobacter pylori HPAG1]
          Length = 605

 Score = 47.9 bits (112), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 17/45 (37%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NVN      ++    R Y  N +      DM+   + L +
Sbjct: 561 YLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEAISLKK 605


>gi|315586853|gb|ADU41234.1| flagellar hook protein [Helicobacter pylori 35A]
          Length = 605

 Score = 47.9 bits (112), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 17/45 (37%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NVN      ++    R Y  N +      DM+   + L +
Sbjct: 561 YLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEAISLKK 605


>gi|163782129|ref|ZP_02177128.1| flagellar hook basal-body protein FlgG [Hydrogenivirga sp.
           128-5-R1-1]
 gi|159882661|gb|EDP76166.1| flagellar hook basal-body protein FlgG [Hydrogenivirga sp.
           128-5-R1-1]
          Length = 242

 Score = 47.9 bits (112), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 13/61 (21%), Positives = 26/61 (42%)

Query: 73  FVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           F     P    +   G ++  NVN +VE   + ET+R +    + I+   ++      ++
Sbjct: 182 FTGTPQPAEGFSVRQGFIELSNVNGIVEMVRLIETSRAHETYARLIQAVDEVQNRVNTIV 241

Query: 133 R 133
           R
Sbjct: 242 R 242


>gi|15645524|ref|NP_207700.1| flagellar hook protein FlgE [Helicobacter pylori 26695]
 gi|2314044|gb|AAD07954.1| flagellar hook (flgE) [Helicobacter pylori 26695]
          Length = 605

 Score = 47.9 bits (112), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 17/45 (37%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NVN      ++    R Y  N +      DM+   + L +
Sbjct: 561 YLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEAISLKK 605


>gi|50120639|ref|YP_049806.1| flagellar hook protein FlgE [Pectobacterium atrosepticum SCRI1043]
 gi|49611165|emb|CAG74611.1| flagellar hook protein [Pectobacterium atrosepticum SCRI1043]
          Length = 405

 Score = 47.9 bits (112), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 20/41 (48%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NV++  E   M    R Y +N QTIK    ++ T + L
Sbjct: 364 ESSNVDLSKELVSMIVAQRNYQSNAQTIKTQDSILQTLVSL 404



 Score = 36.0 bits (81), Expect = 1.8,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 24/63 (38%), Gaps = 4/63 (6%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
              A SGL   S  + +I  NIAN+ T G   G+  +               GV+V  +
Sbjct: 2  GFSQAVSGLNAASNNLDVIGNNIANSATVGFKSGNVTFA----DMFAGSKVGMGVKVASV 57

Query: 67 GVD 69
            D
Sbjct: 58 LQD 60


>gi|196249722|ref|ZP_03148418.1| flagellar basal body rod protein [Geobacillus sp. G11MC16]
 gi|196210598|gb|EDY05361.1| flagellar basal body rod protein [Geobacillus sp. G11MC16]
          Length = 295

 Score = 47.9 bits (112), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 16/116 (13%), Positives = 33/116 (28%), Gaps = 1/116 (0%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFV 74
           L     R+ I SE+         T  +    R  + F                  +    
Sbjct: 175 LDGNGERIAIPSESFTVRDDGTITAENRTIARLGVVFAANPKTVVKEGNGLFRSTEGPLP 234

Query: 75  EEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           +            G ++  NV++     D+    R + AN + I+     +   ++
Sbjct: 235 QAPG-NVTYMVKQGFIERSNVDIEQTMTDLLAAYRAFEANQKIIQAYDRSLDKAVN 289



 Score = 39.1 bits (89), Expect = 0.24,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 21/56 (37%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          ++   + A SG+  Q  R   ++ N+ANA T G    +   R         +    
Sbjct: 20 MLRGLYTAASGMLAQQRRGDWLTNNLANAETPGYKADAGAMRAFPELLMSRLEDES 75


>gi|54294163|ref|YP_126578.1| flagellar hook protein FlgE [Legionella pneumophila str. Lens]
 gi|53753995|emb|CAH15466.1| Flagellar hook protein FlgE [Legionella pneumophila str. Lens]
 gi|307609977|emb|CBW99506.1| flagellar hook protein FlgE [Legionella pneumophila 130b]
          Length = 437

 Score = 47.9 bits (112), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 16/83 (19%), Positives = 30/83 (36%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +  E +   G     +        V     G      SG ++  NV++  E   +    
Sbjct: 354 FADPESLQNIGNTSWAETTSSGQPLVSAPGSGGLGLINSGRLEESNVDLTGELVKLISAQ 413

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R + AN QTI+    +  T +++
Sbjct: 414 RNFQANAQTIRTGDAITQTIINI 436


>gi|329928728|ref|ZP_08282577.1| flagellar hook-basal body protein [Paenibacillus sp. HGF5]
 gi|328937509|gb|EGG33927.1| flagellar hook-basal body protein [Paenibacillus sp. HGF5]
          Length = 296

 Score = 47.9 bits (112), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 10/66 (15%), Positives = 22/66 (33%), Gaps = 1/66 (1%)

Query: 69  DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
           D    V    P        G ++  NV+      ++    R Y  N + ++     +   
Sbjct: 230 DPDGEVRFMTPADNGVVRQGFIEGSNVDPTQSMVELTAALRAYETNQKIVQYYDRTLEKA 289

Query: 129 LD-LLR 133
           ++ + R
Sbjct: 290 VNEIGR 295



 Score = 42.6 bits (98), Expect = 0.020,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 27/65 (41%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  L+   + A SG+  Q  R   +++NIAN  TTG    +   R        ++ G+  
Sbjct: 1  MPSLLRGLYTAASGMMTQEQRHNTVTQNIANVNTTGYKATNSVQRSFPEVLVSMIGGNES 60

Query: 61 VRVKK 65
              +
Sbjct: 61 SNAGR 65


>gi|317182208|dbj|BAJ59992.1| flagellar hook protein FlgE [Helicobacter pylori F57]
          Length = 605

 Score = 47.9 bits (112), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 17/45 (37%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NVN      ++    R Y  N +      DM+   + L +
Sbjct: 561 YLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEAISLKK 605


>gi|317177697|dbj|BAJ55486.1| flagellar hook protein FlgE [Helicobacter pylori F16]
          Length = 605

 Score = 47.9 bits (112), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 17/45 (37%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NVN      ++    R Y  N +      DM+   + L +
Sbjct: 561 YLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEAISLKK 605


>gi|261409669|ref|YP_003245910.1| fagellar hook-basal body protein [Paenibacillus sp. Y412MC10]
 gi|261286132|gb|ACX68103.1| fagellar hook-basal body protein [Paenibacillus sp. Y412MC10]
          Length = 293

 Score = 47.9 bits (112), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 10/66 (15%), Positives = 22/66 (33%), Gaps = 1/66 (1%)

Query: 69  DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
           D    V    P        G ++  NV+      ++    R Y  N + ++     +   
Sbjct: 227 DPDGEVRFMTPADNGVVRQGFIEGSNVDPTQSMVELTAALRAYETNQKIVQYYDRTLEKA 286

Query: 129 LD-LLR 133
           ++ + R
Sbjct: 287 VNEIGR 292



 Score = 41.0 bits (94), Expect = 0.061,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 27/62 (43%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++   + A SG+  Q  R   +++NIAN  TTG    +   R        ++ G+    V
Sbjct: 1  MLRGLYTAASGMMTQEQRHNTVTQNIANVNTTGYKATNSVQRSFPEVLVSMIGGNESSNV 60

Query: 64 KK 65
           +
Sbjct: 61 GR 62


>gi|254779511|ref|YP_003057617.1| flagellar hook protein FlgE [Helicobacter pylori B38]
 gi|254001423|emb|CAX29418.1| Flagellar hook protein FlgE [Helicobacter pylori B38]
          Length = 605

 Score = 47.9 bits (112), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 17/45 (37%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NVN      ++    R Y  N +      DM+   + L +
Sbjct: 561 YLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEAISLKK 605


>gi|217034408|ref|ZP_03439822.1| hypothetical protein HP9810_884g13 [Helicobacter pylori 98-10]
 gi|216943139|gb|EEC22611.1| hypothetical protein HP9810_884g13 [Helicobacter pylori 98-10]
          Length = 605

 Score = 47.9 bits (112), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 17/45 (37%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NVN      ++    R Y  N +      DM+   + L +
Sbjct: 561 YLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEAISLKK 605


>gi|210135099|ref|YP_002301538.1| flagellar hook protein FlgE [Helicobacter pylori P12]
 gi|210133067|gb|ACJ08058.1| flagellar hook protein [Helicobacter pylori P12]
          Length = 605

 Score = 47.9 bits (112), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 17/45 (37%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NVN      ++    R Y  N +      DM+   + L +
Sbjct: 561 YLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEAISLKK 605


>gi|51597637|ref|YP_071828.1| flagellar hook protein FlgE [Yersinia pseudotuberculosis IP 32953]
 gi|186896771|ref|YP_001873883.1| flagellar hook protein FlgE [Yersinia pseudotuberculosis PB1/+]
 gi|51590919|emb|CAH22575.1| Putative FlgE-like flagellar hook protein [Yersinia
           pseudotuberculosis IP 32953]
 gi|186699797|gb|ACC90426.1| flagellar basal body FlaE domain protein [Yersinia
           pseudotuberculosis PB1/+]
          Length = 414

 Score = 47.9 bits (112), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 21/47 (44%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
            SG ++  NV++  E   +    R Y A+ + I  +  MM     +L
Sbjct: 368 ESGALENSNVDITAELVGLMTAQRNYQASTKIISTNDSMMNALFQVL 414



 Score = 39.5 bits (90), Expect = 0.18,   Method: Composition-based stats.
 Identities = 19/65 (29%), Positives = 26/65 (40%), Gaps = 5/65 (7%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          S  IAN+ L   + ++  IS NIAN+ T G         R   S         GV V  +
Sbjct: 2  SFSIANTALNAHTEQLNTISNNIANSATKGFKA-----SRTEFSSMYAQSQPLGVAVSGV 56

Query: 67 GVDQS 71
            + S
Sbjct: 57 SQNIS 61


>gi|332673746|gb|AEE70563.1| flagellar hook [Helicobacter pylori 83]
          Length = 605

 Score = 47.9 bits (112), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 17/45 (37%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NVN      ++    R Y  N +      DM+   + L +
Sbjct: 561 YLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEAISLKK 605


>gi|34497159|ref|NP_901374.1| flagellar hook protein flgE [Chromobacterium violaceum ATCC 12472]
 gi|34103016|gb|AAQ59379.1| flagellar hook protein flgE [Chromobacterium violaceum ATCC 12472]
          Length = 393

 Score = 47.9 bits (112), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 18/41 (43%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           ++  NV+V  E   +    R Y AN + I   + +M   + 
Sbjct: 351 LEQSNVDVTSELVSLMTAQRNYQANTKVISTENQVMQALMQ 391



 Score = 33.7 bits (75), Expect = 9.9,   Method: Composition-based stats.
 Identities = 17/87 (19%), Positives = 31/87 (35%), Gaps = 1/87 (1%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          S  IA SG+   + ++  +S+NIAN+ T G   G   +     +  + M  +     + I
Sbjct: 2  SFEIALSGINAVNNQLGSVSDNIANSGTYGFKSGRVTFA-SAYAGSQAMGVNANPNSQNI 60

Query: 67 GVDQSTFVEEFDPGHPVANASGIVKYP 93
          G +             +      V   
Sbjct: 61 GRNGGLVNTGRALDAAIDGRGFYVSRS 87


>gi|322383079|ref|ZP_08056906.1| flagellar hook-basal body-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
 gi|321152741|gb|EFX45367.1| flagellar hook-basal body-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
          Length = 271

 Score = 47.9 bits (112), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 20/46 (43%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             G ++  NVN+  E  ++    R +  + + +  S  MM    +L
Sbjct: 224 MQGYLEQSNVNLSDEMTELINVQRAFQLSSRAVTSSDSMMGLANNL 269


>gi|291280521|ref|YP_003497356.1| flagellar basal-body rod protein FlgG [Deferribacter desulfuricans
           SSM1]
 gi|290755223|dbj|BAI81600.1| flagellar basal-body rod protein FlgG [Deferribacter desulfuricans
           SSM1]
          Length = 254

 Score = 47.9 bits (112), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 11/52 (21%), Positives = 23/52 (44%), Gaps = 1/52 (1%)

Query: 83  VANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT-TLDLLR 133
                G ++  NVN + E   M E+ R +    + I+   ++ +  + D+ R
Sbjct: 201 PGVRQGYLEGSNVNPVKEMVSMIESMRGFETYQKVIQTIDEINSKSSNDIGR 252



 Score = 40.6 bits (93), Expect = 0.072,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 23/42 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++   + A SG+  Q+ +++IIS N+AN  TT        +R
Sbjct: 1  MLNGLYTATSGMLAQNRKLEIISNNLANINTTSYKREDAIFR 42


>gi|84514831|ref|ZP_01002194.1| Flagellar distal rod protein [Loktanella vestfoldensis SKA53]
 gi|84510990|gb|EAQ07444.1| Flagellar distal rod protein [Loktanella vestfoldensis SKA53]
          Length = 261

 Score = 47.9 bits (112), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 21/118 (17%), Positives = 39/118 (33%), Gaps = 3/118 (2%)

Query: 8   AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
             I      V  ++  ++S   A      +          + +    +   G   V +  
Sbjct: 140 IRIPADATEVNISQDGLVSVRQA---GEEEAQEVGQLTIASFANPRGLQPIGESFVTQTL 196

Query: 68  VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
              +  V             G ++  NVNV+ +  +M ET R Y  + + I  S +MM
Sbjct: 197 ASGAPTVAAPQAQGLGKLMQGALEGSNVNVVQQLVEMIETQRAYEVSSKAISSSDEMM 254



 Score = 44.5 bits (103), Expect = 0.004,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 22/41 (53%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  + H+A +GL  Q  RMQ+I+ N+AN  T G       +
Sbjct: 1  MTNAMHVAKTGLNAQQTRMQVIANNLANLNTVGFKSDRVNF 41


>gi|261838284|gb|ACX98050.1| flagellar hook protein [Helicobacter pylori 51]
          Length = 605

 Score = 47.9 bits (112), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 17/45 (37%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NVN      ++    R Y  N +      DM+   + L +
Sbjct: 561 YLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEAISLKK 605


>gi|323498420|ref|ZP_08103416.1| flagellar hook protein FlgE [Vibrio sinaloensis DSM 21326]
 gi|323316493|gb|EGA69508.1| flagellar hook protein FlgE [Vibrio sinaloensis DSM 21326]
          Length = 438

 Score = 47.9 bits (112), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 14/84 (16%), Positives = 34/84 (40%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
            ++ E+ +   GG +             E + G   +  SG ++  N+++  E  D+   
Sbjct: 354 RVANEQGLDKKGGTQWDSTQFSGDKIWGESNKGSFGSINSGTLEQSNIDMTQELVDLITA 413

Query: 108 NRLYMANLQTIKQSHDMMTTTLDL 131
            R + AN ++++  +      L +
Sbjct: 414 QRNFQANSRSLEVHNQTQQNILQI 437



 Score = 37.2 bits (84), Expect = 0.70,   Method: Composition-based stats.
 Identities = 11/35 (31%), Positives = 16/35 (45%)

Query: 10 IANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +A SG++     +   S NIANA T G       +
Sbjct: 4  VALSGISAAQLDLNTTSNNIANANTYGFKESRAEF 38


>gi|254508422|ref|ZP_05120542.1| flagellar hook protein [Vibrio parahaemolyticus 16]
 gi|219548632|gb|EED25637.1| flagellar hook protein [Vibrio parahaemolyticus 16]
          Length = 438

 Score = 47.9 bits (112), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 14/84 (16%), Positives = 34/84 (40%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
            ++ E+ +   GG +             E + G   +  SG ++  N+++  E  D+   
Sbjct: 354 RVANEQGLDKKGGTQWDSTQFSGDKIWGESNKGSFGSINSGTLEQSNIDMTQELVDLITA 413

Query: 108 NRLYMANLQTIKQSHDMMTTTLDL 131
            R + AN ++++  +      L +
Sbjct: 414 QRNFQANSRSLEVHNQTQQNILQI 437



 Score = 37.2 bits (84), Expect = 0.72,   Method: Composition-based stats.
 Identities = 11/35 (31%), Positives = 16/35 (45%)

Query: 10 IANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +A SG++     +   S NIANA T G       +
Sbjct: 4  VALSGISAAQLDLNTTSNNIANANTFGFKESRAEF 38


>gi|104782843|ref|YP_609341.1| flagellar hook protein FlgE [Pseudomonas entomophila L48]
 gi|95111830|emb|CAK16554.1| flagellar hook protein FlgE [Pseudomonas entomophila L48]
          Length = 463

 Score = 47.9 bits (112), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 17/83 (20%), Positives = 34/83 (40%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +  + +   GG R K+        ++    G   +  S  ++  NVN+  E  ++ +  
Sbjct: 380 FANPQGLQQIGGTRWKESFASGIPGIDAPKTGTLGSVESNSLEASNVNLTQELVELIKAQ 439

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
             Y AN +TI     +M T + +
Sbjct: 440 SNYQANAKTISTESTIMQTIIQM 462



 Score = 35.2 bits (79), Expect = 3.1,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 17/39 (43%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          S +I  SGL   + ++ +   NIAN  T G       + 
Sbjct: 2  SFNIGLSGLYAANKQLDVTGNNIANVNTNGFKSSRAEFA 40


>gi|330899403|gb|EGH30822.1| flagellar hook protein FlgE [Pseudomonas syringae pv. japonica str.
           M301072PT]
          Length = 581

 Score = 47.9 bits (112), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 17/41 (41%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           ++  NV +  E   + +    Y AN + I     +M T + 
Sbjct: 539 LEGSNVVLADELIALIQAQTAYQANSKAISTEVTLMQTLIQ 579


>gi|188527733|ref|YP_001910420.1| flagellar hook protein FlgE [Helicobacter pylori Shi470]
 gi|188143973|gb|ACD48390.1| flagellar hook protein FlgE [Helicobacter pylori Shi470]
          Length = 605

 Score = 47.9 bits (112), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 17/45 (37%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NVN      ++    R Y  N +      DM+   + L +
Sbjct: 561 YLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEAISLKK 605


>gi|208434813|ref|YP_002266479.1| flagellar hook protein [Helicobacter pylori G27]
 gi|208432742|gb|ACI27613.1| flagellar hook protein [Helicobacter pylori G27]
          Length = 605

 Score = 47.9 bits (112), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 17/45 (37%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NVN      ++    R Y  N +      DM+   + L +
Sbjct: 561 YLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEAISLKK 605


>gi|317009564|gb|ADU80144.1| flagellar hook protein FlgE [Helicobacter pylori India7]
          Length = 605

 Score = 47.9 bits (112), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 17/45 (37%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NVN      ++    R Y  N +      DM+   + L +
Sbjct: 561 YLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEAISLKK 605


>gi|167835111|ref|ZP_02461994.1| flagellar hook protein FlgE [Burkholderia thailandensis MSMB43]
          Length = 413

 Score = 47.9 bits (112), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 13/83 (15%), Positives = 29/83 (34%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +    +   G  +  +        +      +        ++  NV++  +  ++    
Sbjct: 331 FNNPNGLVNIGNNQYVETAASGVPQISAPGSTNHGTLQGSALENSNVDLTSQLVNLITAQ 390

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y AN QTIK    +  T ++L
Sbjct: 391 RNYQANAQTIKTQQAVDQTLINL 413


>gi|189426324|ref|YP_001953501.1| flagellar hook-associated protein FlgK [Geobacter lovleyi SZ]
 gi|189422583|gb|ACD96981.1| flagellar hook-associated protein FlgK [Geobacter lovleyi SZ]
          Length = 465

 Score = 47.9 bits (112), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 23/130 (17%), Positives = 46/130 (35%), Gaps = 6/130 (4%)

Query: 10  IANSGLAVQSARMQIISEN-IANAR---TTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
           +A S  A +S  +     N +A A+           +     T++            V +
Sbjct: 336 VAVSTGAAESMALAFTDINKVAAAQGPLPIATGDNRNALALATLNRTNGYSDDYNKLVAQ 395

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPN--VNVLVETADMRETNRLYMANLQTIKQSHD 123
           +G+D                    ++  N  V++  E  D+ +  R Y A  + I  + D
Sbjct: 396 VGLDVQNAATVVKQDAAFMKQLNTLRDSNSGVSLDEELTDLMKYQRSYQACAKLITTAGD 455

Query: 124 MMTTTLDLLR 133
           M+   ++L+R
Sbjct: 456 MLDIAVNLVR 465



 Score = 38.3 bits (87), Expect = 0.39,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 24/67 (35%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            L A   I  +G+ V     +++SENIAN  T G +           S         GV
Sbjct: 1  MGLSAVLQIGTTGMRVYQVATEVVSENIANVNTPGYSRQRIVLETAEASTHNGFPLGSGV 60

Query: 62 RVKKIGV 68
           V  +  
Sbjct: 61 NVAAVER 67


>gi|294508678|ref|YP_003572737.1| flagellar basal-body rod protein [Salinibacter ruber M8]
 gi|294345007|emb|CBH25785.1| flagellar basal-body rod protein [Salinibacter ruber M8]
          Length = 260

 Score = 47.9 bits (112), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 14/93 (15%), Positives = 28/93 (30%), Gaps = 4/93 (4%)

Query: 38  TPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNV 97
           T G        ++  E                 +      +P          V+  NV+ 
Sbjct: 167 TAGQQRVGALRVATFENPEQLERTSGASFAAGDAQPQAAENPVVLQGK----VETSNVDP 222

Query: 98  LVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           + E  +M E  R + A  +TI+ +  ++     
Sbjct: 223 VTELTNMIEIQRQFEAQQKTIQTTDGVLGRATQ 255


>gi|317180242|dbj|BAJ58028.1| flagellar hook protein FlgE [Helicobacter pylori F32]
          Length = 605

 Score = 47.9 bits (112), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 17/45 (37%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NVN      ++    R Y  N +      DM+   + L +
Sbjct: 561 YLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEAISLKK 605


>gi|239995125|ref|ZP_04715649.1| flagellar hook protein FlgE [Alteromonas macleodii ATCC 27126]
          Length = 461

 Score = 47.9 bits (112), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 18/98 (18%), Positives = 37/98 (37%)

Query: 34  TTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
           + G +           S E+ +      + K+  +       E   G      S  ++  
Sbjct: 363 SNGTSEPIVRVALVRFSNEQGLTQESSTQWKESILSGEALAGEATTGTFGEINSSALEQA 422

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           NVN+  E  DM    R + AN + ++ ++ +  T L++
Sbjct: 423 NVNLTTELIDMIIAQRNFQANSRALEVNNSLNQTILNI 460



 Score = 39.5 bits (90), Expect = 0.15,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 18/38 (47%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          S +IA SG++     + + + NIAN  T G       +
Sbjct: 2  SFNIALSGVSAAQKDLDVTANNIANVNTVGFKESRAEF 39


>gi|333004885|gb|EGK24405.1| flagellar hook protein flgE [Shigella flexneri VA-6]
          Length = 399

 Score = 47.9 bits (112), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 26/51 (50%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +     +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 348 NFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTRVNL 398



 Score = 34.8 bits (78), Expect = 3.8,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 4/63 (6%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          +   A SGL   +  + +I  NIAN+ T G   G+  +               GV+V  I
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFA----DMFAGSKVGLGVKVAGI 57

Query: 67 GVD 69
            D
Sbjct: 58 TQD 60


>gi|254502675|ref|ZP_05114826.1| conserved domain protein [Labrenzia alexandrii DFL-11]
 gi|222438746|gb|EEE45425.1| conserved domain protein [Labrenzia alexandrii DFL-11]
          Length = 477

 Score = 47.9 bits (112), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 23/135 (17%), Positives = 49/135 (36%), Gaps = 9/135 (6%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIA---NARTTGDTPGSDPYRRKTISFEEVMHGS 58
           D +  S +++ +G A           NIA   + R       +       I         
Sbjct: 349 DGIATSVNLSQNGYAAGEL------TNIAIDESGRVIASYSNNQTRALYEIPLATFQAEQ 402

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
              RV       ++   + D     A  S  ++  N ++  E + +  T + Y AN + +
Sbjct: 403 SLRRVDGAAFAATSDSGDADLSGGGAVISNALELSNADIADEFSKLIITQQAYSANSRIV 462

Query: 119 KQSHDMMTTTLDLLR 133
             + +M+ + L+++R
Sbjct: 463 TSADEMLDSALNMVR 477



 Score = 35.2 bits (79), Expect = 2.7,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 23/43 (53%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
            +  + + A SGL+ Q+  ++ IS N+AN++T G       +
Sbjct: 1  MGIYGAINSAVSGLSAQATALENISGNVANSQTVGFKRLDTTF 43


>gi|304407726|ref|ZP_07389377.1| fagellar hook-basal body protein [Paenibacillus curdlanolyticus
           YK9]
 gi|304343209|gb|EFM09052.1| fagellar hook-basal body protein [Paenibacillus curdlanolyticus
           YK9]
          Length = 270

 Score = 47.9 bits (112), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 20/46 (43%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             G V+  NV++  E  D+    R Y  + + +  S  MM    +L
Sbjct: 223 RQGYVEQSNVDMTSEMTDLINVQRAYQLSARALTSSDSMMGFANNL 268


>gi|298507071|gb|ADI85794.1| flagellar hook-associated protein FlgK [Geobacter sulfurreducens
           KN400]
          Length = 477

 Score = 47.9 bits (112), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 21/102 (20%), Positives = 39/102 (38%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             +++   IA SG+  Q   +++ SENI N  T G +  +  +   T+S E       GV
Sbjct: 1   MSILSLLDIAKSGITAQRLALEVTSENITNVNTPGYSKQTTVFTTATVSQERGFPLGNGV 60

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETAD 103
           RV +I      F++                  ++    +  +
Sbjct: 61  RVAEIQRAYDDFLQMQLKSENTTKGWSDTVLASMTRAEQLFN 102



 Score = 39.1 bits (89), Expect = 0.20,   Method: Composition-based stats.
 Identities = 18/132 (13%), Positives = 40/132 (30%), Gaps = 7/132 (5%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGD-TPGSDPYRRKTISFEEVMHGSGGV 61
            +  S  IA       +    + + N  NA+          P     ++     +   G 
Sbjct: 352 AISNSNDIAA----ANADPSVVGTGNNTNAKDIASLFDKILPLSGGNMTLGGFYNSLVGK 407

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
               +   + +          + N         V++  E A++ +  + +    + I   
Sbjct: 408 VGVSVQNAERSATLSEGVLKQLDNLRE--SQSGVSLDEELANLIKYQKAFEGAAKLINTG 465

Query: 122 HDMMTTTLDLLR 133
            +MM   L L+R
Sbjct: 466 TEMMDVILGLVR 477


>gi|207092210|ref|ZP_03239997.1| flagellar hook protein FlgE [Helicobacter pylori HPKX_438_AG0C1]
          Length = 605

 Score = 47.9 bits (112), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 17/45 (37%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NVN      ++    R Y  N +      DM+   + L +
Sbjct: 561 YLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEAISLKK 605


>gi|291518271|emb|CBK73492.1| fagellar hook-basal body proteins [Butyrivibrio fibrisolvens 16/4]
          Length = 267

 Score = 47.9 bits (112), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 22/49 (44%), Gaps = 1/49 (2%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD-LLR 133
             G+++  NVNV+ E   M    R Y A  + I+     +  T + + R
Sbjct: 218 QQGMLEASNVNVIDEMVSMITIARAYEAGQKMIQAEDSTLEKTANQIGR 266


>gi|197120124|ref|YP_002140551.1| flagellar basal body rod protein FlgF [Geobacter bemidjiensis Bem]
 gi|197089484|gb|ACH40755.1| flagellar basal body rod protein FlgF [Geobacter bemidjiensis Bem]
          Length = 238

 Score = 47.9 bits (112), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 23/49 (46%)

Query: 82  PVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             +   G ++  NV V+VE A M E +R +    + +K   DM    ++
Sbjct: 185 QASVKQGYLESSNVKVVVEMARMIEASRYFETCAKAVKSYDDMTAKAVN 233



 Score = 35.6 bits (80), Expect = 2.0,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 30/78 (38%), Gaps = 2/78 (2%)

Query: 4  LIASAHIANSG-LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
          + +  + A SG L+ Q  R+ +IS N+AN+ T+G       +     + +     +    
Sbjct: 1  MNSGIYAALSGNLSAQR-RLDVISNNLANSNTSGFKADQIQFESVLANVKNPTQQAPVFS 59

Query: 63 VKKIGVDQSTFVEEFDPG 80
            +   D S    +    
Sbjct: 60 NDRYSTDYSPGAMQRTEN 77


>gi|39998134|ref|NP_954085.1| flagellar hook-associated protein FlgK [Geobacter sulfurreducens
           PCA]
 gi|39985080|gb|AAR36435.1| flagellar hook-associated protein FlgK [Geobacter sulfurreducens
           PCA]
          Length = 477

 Score = 47.9 bits (112), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 21/102 (20%), Positives = 39/102 (38%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             +++   IA SG+  Q   +++ SENI N  T G +  +  +   T+S E       GV
Sbjct: 1   MSILSLLDIAKSGITAQRLALEVTSENITNVNTPGYSKQTTVFTTATVSQERGFPLGNGV 60

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETAD 103
           RV +I      F++                  ++    +  +
Sbjct: 61  RVAEIQRAYDDFLQMQLKSENTTKGWSDTVLASMTRAEQLFN 102



 Score = 39.1 bits (89), Expect = 0.22,   Method: Composition-based stats.
 Identities = 23/132 (17%), Positives = 46/132 (34%), Gaps = 14/132 (10%)

Query: 14  GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR----------V 63
           G++V  +    I+   ANA  +    G++   +   S  + +    G            V
Sbjct: 348 GISVAISNSNDIAA--ANADPSVGGTGNNTNAKDIASLFDKILPLSGGNMTLGGFYNSLV 405

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVK--YPNVNVLVETADMRETNRLYMANLQTIKQS 121
            K+GV              V      ++     V++  E A++ +  + +    + I   
Sbjct: 406 GKVGVSVQNAERSATLSEGVLKQLDNLRESQSGVSLDEELANLIKYQKAFEGAAKLINTG 465

Query: 122 HDMMTTTLDLLR 133
            +MM   L L+R
Sbjct: 466 TEMMDVILGLVR 477


>gi|330975977|gb|EGH76043.1| flagellar hook protein FlgE [Pseudomonas syringae pv. aptata str.
           DSM 50252]
          Length = 581

 Score = 47.9 bits (112), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 17/41 (41%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           ++  NV +  E   + +    Y AN + I     +M T + 
Sbjct: 539 LEGSNVVLADELIALIQAQTAYQANSKAISTEVTLMQTLIQ 579


>gi|295678058|ref|YP_003606582.1| fagellar hook-basal body protein [Burkholderia sp. CCGE1002]
 gi|295437901|gb|ADG17071.1| fagellar hook-basal body protein [Burkholderia sp. CCGE1002]
          Length = 510

 Score = 47.9 bits (112), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 36/109 (33%), Gaps = 4/109 (3%)

Query: 23  QIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHP 82
             ++ N +N +T                   + +   G          ST        + 
Sbjct: 406 GTLTGNYSNGQTAALGQIVLANFANQNGLVNLGNNEYGQTSASGVAQISTP----GSTNH 461

Query: 83  VANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
                G V+  NV++  E  ++    R Y AN QTIK    +  T ++L
Sbjct: 462 GVLQGGAVENSNVDLTSELVNLITAQRNYQANAQTIKTQQAVDQTLINL 510


>gi|317014317|gb|ADU81753.1| flagellar hook protein FlgE [Helicobacter pylori Gambia94/24]
          Length = 605

 Score = 47.6 bits (111), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 17/45 (37%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NVN      ++    R Y  N +      DM+   + L +
Sbjct: 561 YLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEAISLKK 605


>gi|312962588|ref|ZP_07777078.1| flagellar hook protein FlgE [Pseudomonas fluorescens WH6]
 gi|311283168|gb|EFQ61759.1| flagellar hook protein FlgE [Pseudomonas fluorescens WH6]
          Length = 437

 Score = 47.6 bits (111), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 15/83 (18%), Positives = 33/83 (39%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            + E+ +  +G    ++         +    G   +  +  ++  NVN+  E  D+ +  
Sbjct: 354 FNNEQGLQPAGSTTWRETFASGQPGYDTPQSGTLGSIVANSLENSNVNLTNELVDLIKAQ 413

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
             Y AN +TI     +M T + +
Sbjct: 414 SNYQANAKTISTQSTIMQTIIQM 436



 Score = 34.8 bits (78), Expect = 3.8,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 18/39 (46%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          S +I  SGL   + ++ +   NIAN  TTG       + 
Sbjct: 2  SFNIGLSGLYAANKQLDVTGNNIANVATTGFKSSRAEFA 40


>gi|239828563|ref|YP_002951187.1| flagellar basal body rod protein [Geobacillus sp. WCH70]
 gi|239808856|gb|ACS25921.1| flagellar basal body rod protein [Geobacillus sp. WCH70]
          Length = 278

 Score = 47.6 bits (111), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 20/121 (16%), Positives = 37/121 (30%), Gaps = 2/121 (1%)

Query: 15  LAVQSARMQIISENIA-NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTF 73
           L     R+Q+ S N A NA  T     +   R                       +    
Sbjct: 156 LDENGRRIQLPSTNFAVNADGTIVANNTRIARINIAFAANPNTLVKEGNGLFRSENGVLP 215

Query: 74  VEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD-LL 132
               +P        G ++  NV++     +M    R + AN + ++     M   ++ + 
Sbjct: 216 SALGNPNITYTLKQGFLERANVDLNRAMTEMLSAYRAFEANQKIVQAYDRSMDKAVNEIG 275

Query: 133 R 133
           R
Sbjct: 276 R 276



 Score = 42.2 bits (97), Expect = 0.027,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 23/55 (41%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++   + A SG+  Q  R+++ + NIANA T G        R         +  +
Sbjct: 1  MLRGFYTAASGMMAQQRRIEMWTNNIANANTPGYKSDQAALRAFPELLLSRLDKA 55


>gi|170288661|ref|YP_001738899.1| flagellar hook-associated protein FlgK [Thermotoga sp. RQ2]
 gi|170176164|gb|ACB09216.1| flagellar hook-associated protein FlgK [Thermotoga sp. RQ2]
          Length = 858

 Score = 47.6 bits (111), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 15/103 (14%), Positives = 35/103 (33%), Gaps = 1/103 (0%)

Query: 30  ANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK-KIGVDQSTFVEEFDPGHPVANASG 88
           AN             +  +   E      GGV  +  +  + ++ ++           + 
Sbjct: 754 ANPELLETIQNLYTKKMLSNGKESFYEFFGGVISELGVEAETASNLKNNTEILRQEIDNA 813

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             +   V++  E A+M E    + A  + I     M+ T +++
Sbjct: 814 REEVKGVSLDEEMANMIEYQHAFSAAAKVITAVDQMIQTVINM 856



 Score = 42.6 bits (98), Expect = 0.017,   Method: Composition-based stats.
 Identities = 16/108 (14%), Positives = 32/108 (29%), Gaps = 7/108 (6%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV------- 54
             +    + A +G+      M ++  NIANA T G +                       
Sbjct: 4   MSMFGILNTALTGIHAHKLAMNVVGHNIANASTPGYSRQRPVIEANPPIPLTTLTQPSFP 63

Query: 55  MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETA 102
           +    G +VK I   +  F++                  N++ + +  
Sbjct: 64  LQMGTGAKVKTIVRLRDAFLDVQYRQVNNRYNYWDTVLSNLHFIEQLL 111


>gi|89092137|ref|ZP_01165092.1| flagellar basal-body rod protein FlgF [Oceanospirillum sp. MED92]
 gi|89083872|gb|EAR63089.1| flagellar basal-body rod protein FlgF [Oceanospirillum sp. MED92]
          Length = 247

 Score = 47.6 bits (111), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 16/86 (18%), Positives = 32/86 (37%), Gaps = 4/86 (4%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
            +   +      G     I  DQ        P   V   SG ++  NVN + E   +  +
Sbjct: 164 KLVNPDPASVFKGPDGLMITGDQVPLE----PDPAVQVRSGYLEASNVNAVSELTGIITS 219

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
           +R +   ++ +K + +   +   +LR
Sbjct: 220 SRQFEMQIKMMKTAEENSESAAAILR 245


>gi|328958264|ref|YP_004375650.1| putative flagellar basal-body rod protein [Carnobacterium sp. 17-4]
 gi|328674588|gb|AEB30634.1| putative flagellar basal-body rod protein [Carnobacterium sp. 17-4]
          Length = 252

 Score = 47.6 bits (111), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 6/46 (13%), Positives = 21/46 (45%)

Query: 85  NASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
                ++  NV  + E  ++ + +R + AN + +  + + +   ++
Sbjct: 202 MQQSYLEASNVQTVDEITNLMQVSREFEANQKALSAADETLRKAVN 247


>gi|307637597|gb|ADN80047.1| Flagellar hook protein [Helicobacter pylori 908]
 gi|325996190|gb|ADZ51595.1| Flagellar hook protein [Helicobacter pylori 2018]
 gi|325997786|gb|ADZ49994.1| Flagellar hook protein [Helicobacter pylori 2017]
          Length = 605

 Score = 47.6 bits (111), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 17/45 (37%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NVN      ++    R Y  N +      DM+   + L +
Sbjct: 561 YLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEAISLKK 605


>gi|32265682|ref|NP_859714.1| flagellar hook protein FlgE [Helicobacter hepaticus ATCC 51449]
 gi|32261730|gb|AAP76780.1| flagellar hook protein FlgE [Helicobacter hepaticus ATCC 51449]
          Length = 745

 Score = 47.6 bits (111), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 19/45 (42%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NV+V     ++    R Y  N +      D++   L+L R
Sbjct: 701 HLETSNVDVGNALTELIVMQRGYSMNARAFTTGDDLIKEALNLKR 745


>gi|118474252|ref|YP_891218.1| flagellar hook protein [Campylobacter fetus subsp. fetus 82-40]
 gi|118413478|gb|ABK81898.1| flagellar hook protein [Campylobacter fetus subsp. fetus 82-40]
          Length = 546

 Score = 47.6 bits (111), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 10/50 (20%), Positives = 25/50 (50%)

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           A  +  ++  NV++ V   D+    + Y A+ ++I  S  M+   +++ +
Sbjct: 497 AIKNSTLEMSNVDLGVSLTDLIIMQKAYDASAKSITTSDQMIQKAINMKK 546


>gi|109899402|ref|YP_662657.1| flagellar hook protein FlgE [Pseudoalteromonas atlantica T6c]
 gi|109701683|gb|ABG41603.1| flagellar basal body FlaE [Pseudoalteromonas atlantica T6c]
          Length = 458

 Score = 47.6 bits (111), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 18/127 (14%), Positives = 43/127 (33%), Gaps = 13/127 (10%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           +    I   GL      ++    N       G +           + ++ +      + +
Sbjct: 344 LTGIDIGADGL------VRATYSN-------GTSEPIIRVALVRFANDQGLTQQSNTQWQ 390

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           +  +       E   G      S  ++  NVN+  E  D+    R + AN + ++ ++ +
Sbjct: 391 ESILSGEALAGEATTGTFGDINSSALEQANVNLTTELIDLIIAQRNFQANSRALEVNNQL 450

Query: 125 MTTTLDL 131
             T L++
Sbjct: 451 NQTILNI 457



 Score = 39.5 bits (90), Expect = 0.15,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 17/38 (44%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          S +IA SG++     +   + NIAN  T G       +
Sbjct: 2  SFNIALSGVSAAQRDLDTTANNIANVNTVGFKESRAEF 39


>gi|315929129|gb|EFV08356.1| flagellar basal-body rod protein FlgG [Campylobacter jejuni subsp.
           jejuni 305]
          Length = 250

 Score = 47.6 bits (111), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 13/74 (17%), Positives = 22/74 (29%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                  +H  G     + G   +                G ++  NV ++ E  D+   
Sbjct: 177 QFINPAGLHSMGDNLYLETGASGAPVAGIAGQDGLGTIRHGFIELSNVQLVEEMTDLITG 236

Query: 108 NRLYMANLQTIKQS 121
            R Y A  + I  S
Sbjct: 237 QRAYEAGSKAITTS 250



 Score = 41.0 bits (94), Expect = 0.053,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 19/41 (46%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          + S H A +G+  Q  ++ + S NIAN  T G       + 
Sbjct: 1  MRSLHTAATGMVAQQTQIDVTSNNIANVNTAGFKKSRAEFA 41


>gi|54308098|ref|YP_129118.1| flagellar basal body rod protein FlgF [Photobacterium profundum
           SS9]
 gi|46912524|emb|CAG19316.1| putative flagellar basal-body rod protein FlgF [Photobacterium
           profundum SS9]
          Length = 249

 Score = 47.6 bits (111), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 26/61 (42%)

Query: 73  FVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
               +D    V    G ++  NVN + E   M +  R +   ++ +K + +M   +  LL
Sbjct: 187 PGVIYDADAGVTLLKGALEGSNVNAVGEMTSMIDLQRHFEMQVKIMKTAEEMDQASASLL 246

Query: 133 R 133
           R
Sbjct: 247 R 247


>gi|54308097|ref|YP_129117.1| flagellar hook protein FlgE [Photobacterium profundum SS9]
 gi|46912523|emb|CAG19315.1| putative flagellar hook protein FlgE [Photobacterium profundum SS9]
          Length = 435

 Score = 47.6 bits (111), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 15/84 (17%), Positives = 35/84 (41%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
            ++ E+ +   GG +        +    E   G   +  SG ++  N+++  E  D+   
Sbjct: 351 RVANEQGLVSKGGTQWATGQDSGAAIWGEASQGAFGSVKSGTLEQSNIDMTQELVDLITA 410

Query: 108 NRLYMANLQTIKQSHDMMTTTLDL 131
            R + AN + ++  + +  T L +
Sbjct: 411 QRNFQANSRALEVDNQLQQTILQI 434



 Score = 37.5 bits (85), Expect = 0.56,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 16/38 (42%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
            +I+ SG+      +   S NIANA T G       +
Sbjct: 2  GFNISLSGIGASQKDLNTTSNNIANANTYGFKESRAEF 39


>gi|213613181|ref|ZP_03371007.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-2068]
          Length = 110

 Score = 47.6 bits (111), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 26/51 (50%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +     +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 59  NFGKLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 109


>gi|90411005|ref|ZP_01219019.1| flagellar hook protein [Photobacterium profundum 3TCK]
 gi|90328218|gb|EAS44529.1| flagellar hook protein [Photobacterium profundum 3TCK]
          Length = 435

 Score = 47.6 bits (111), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 15/84 (17%), Positives = 35/84 (41%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
            ++ E+ +   GG +        +    E   G   +  SG ++  N+++  E  D+   
Sbjct: 351 RVANEQGLVSKGGTQWATGQDSGAAIWGEASQGAFGSVKSGTLEQSNIDMTQELVDLITA 410

Query: 108 NRLYMANLQTIKQSHDMMTTTLDL 131
            R + AN + ++  + +  T L +
Sbjct: 411 QRNFQANSRALEVDNQLQQTILQI 434



 Score = 37.5 bits (85), Expect = 0.56,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 16/38 (42%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
            +I+ SG+      +   S NIANA T G       +
Sbjct: 2  GFNISLSGIGASQKDLNTTSNNIANANTYGFKESRAEF 39


>gi|15611911|ref|NP_223562.1| flagellar hook protein FlgE [Helicobacter pylori J99]
 gi|4155414|gb|AAD06422.1| putative FLAGELLAR BASAL-BODY/ROD/HOOKPROTEIN [Helicobacter pylori
           J99]
          Length = 605

 Score = 47.6 bits (111), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 17/45 (37%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NVN      ++    R Y  N +      DM+   + L +
Sbjct: 561 YLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEAISLKK 605


>gi|325274800|ref|ZP_08140828.1| flagellar hook protein FlgE [Pseudomonas sp. TJI-51]
 gi|324100068|gb|EGB97886.1| flagellar hook protein FlgE [Pseudomonas sp. TJI-51]
          Length = 440

 Score = 47.6 bits (111), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 30/77 (38%)

Query: 55  MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
           +   GG   K+        +   D G       G ++  NV++  E  ++ +    Y AN
Sbjct: 363 LTPIGGTNWKESYASGVPVIGAPDTGTLGQITGGALEDSNVDLTGELVNLIKAQSNYQAN 422

Query: 115 LQTIKQSHDMMTTTLDL 131
            +TI     +M T + +
Sbjct: 423 AKTISTESTIMQTIIQM 439



 Score = 39.1 bits (89), Expect = 0.22,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 31/82 (37%), Gaps = 2/82 (2%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          S +I  SGL   +  + +   NIAN  TTG       +  +      +   S G  V   
Sbjct: 2  SFNIGLSGLYAANKALNVTGNNIANVATTGFKSSRAEFADQ--YSNSIRGTSAGKSVIGT 59

Query: 67 GVDQSTFVEEFDPGHPVANASG 88
          GV  +   + F PG+  A    
Sbjct: 60 GVKTAAVSQLFTPGNINATGQA 81


>gi|295097202|emb|CBK86292.1| fagellar hook-basal body proteins [Enterobacter cloacae subsp.
           cloacae NCTC 9394]
          Length = 245

 Score = 47.6 bits (111), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 12/95 (12%), Positives = 31/95 (32%), Gaps = 1/95 (1%)

Query: 39  PGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVAN-ASGIVKYPNVNV 97
            G +P     +   ++++      +               P       +   ++  NV+ 
Sbjct: 148 AGDEPTAVVPVGRLKMVNAPMSTLIHGDDGLFRPAAGNALPQDDAMRLSPESLEGSNVSP 207

Query: 98  LVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +    +M  T R +  N++ I+ + +       LL
Sbjct: 208 VKAMTEMIATARSFEMNMKVIRTADENAQKANQLL 242


>gi|237799207|ref|ZP_04587668.1| flagellar hook protein FlgE [Pseudomonas syringae pv. oryzae str.
           1_6]
 gi|237806226|ref|ZP_04592930.1| flagellar hook protein FlgE [Pseudomonas syringae pv. oryzae str.
           1_6]
 gi|331022062|gb|EGI02119.1| flagellar hook protein FlgE [Pseudomonas syringae pv. oryzae str.
           1_6]
 gi|331027339|gb|EGI07394.1| flagellar hook protein FlgE [Pseudomonas syringae pv. oryzae str.
           1_6]
          Length = 582

 Score = 47.6 bits (111), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 17/41 (41%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           ++  NV +  E   + +    Y AN + I     +M T + 
Sbjct: 540 LEGSNVVLADELIALIQAQTAYQANSKAISTEVTLMQTLIQ 580


>gi|78044159|ref|YP_359861.1| flagellar hook-basal body rod protein [Carboxydothermus
           hydrogenoformans Z-2901]
 gi|77996274|gb|ABB15173.1| flagellar hook-basal body rod protein [Carboxydothermus
           hydrogenoformans Z-2901]
          Length = 244

 Score = 47.6 bits (111), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 18/113 (15%), Positives = 31/113 (27%), Gaps = 2/113 (1%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           ++   +I+ +GL     ++  ++ NIAN  T G                       G   
Sbjct: 1   MLRGIYISATGLKAGLKQLDTVANNIANINTVGYRADITVNSGFEEKILNYAGKEVGKLE 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRL--YMAN 114
             +  D +          P           N   +VET       R   +  N
Sbjct: 61  YGVNPDINYLDLSSGKYVPTGRNLDFALVGNGFFVVETPAGLRYTRAGDFQVN 113



 Score = 37.9 bits (86), Expect = 0.49,   Method: Composition-based stats.
 Identities = 9/48 (18%), Positives = 24/48 (50%), Gaps = 1/48 (2%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD-LLR 133
            G ++  NV+   E   + E+ R   +N + +K   ++++  ++ L +
Sbjct: 195 QGYLEQSNVDPNREYPALLESLRYLQSNARGLKVQDELLSKAVNDLGK 242


>gi|308050024|ref|YP_003913590.1| flagellar hook-basal body protein [Ferrimonas balearica DSM 9799]
 gi|307632214|gb|ADN76516.1| flagellar hook-basal body protein [Ferrimonas balearica DSM 9799]
          Length = 407

 Score = 47.6 bits (111), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 7/39 (17%), Positives = 16/39 (41%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
           ++  NV++  E  ++    R Y +N + I     +    
Sbjct: 365 IEGSNVDLTGELVNLMTAQRNYQSNAKVISTQDKLTQAL 403



 Score = 37.2 bits (84), Expect = 0.85,   Method: Composition-based stats.
 Identities = 15/39 (38%), Positives = 18/39 (46%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          S +IA SGL   S  +  IS NIAN  T G       + 
Sbjct: 2  SFNIALSGLRSTSQDLNTISNNIANVSTPGFRGSRTEFA 40


>gi|91792664|ref|YP_562315.1| flagellar hook protein FlgE [Shewanella denitrificans OS217]
 gi|91714666|gb|ABE54592.1| protein of unknown function DUF1078-like protein [Shewanella
           denitrificans OS217]
          Length = 455

 Score = 47.6 bits (111), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 13/61 (21%), Positives = 28/61 (45%)

Query: 71  STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
                E + G   +  S  ++  NV++  E  D+    R + AN +T++ ++ +  T L 
Sbjct: 394 PALAGEANSGTFGSIRSSALEQSNVDLTTELVDLISAQRNFQANSRTLEVNNTLQQTILQ 453

Query: 131 L 131
           +
Sbjct: 454 I 454



 Score = 39.9 bits (91), Expect = 0.11,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 17/39 (43%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          S +IA SG+A     +   + NIAN  T G       + 
Sbjct: 2  SFNIALSGIAAAQKDLNTTANNIANVNTIGFKESRAEFA 40


>gi|332140546|ref|YP_004426284.1| flagellar hook protein FlgE [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|327550568|gb|AEA97286.1| flagellar hook protein FlgE [Alteromonas macleodii str. 'Deep
           ecotype']
          Length = 461

 Score = 47.6 bits (111), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 18/98 (18%), Positives = 37/98 (37%)

Query: 34  TTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
           + G +           S E+ +      + K+  +       E   G      S  ++  
Sbjct: 363 SNGTSEPIVRVALVRFSNEQGLTQESSTQWKESILSGEALAGEATTGTFGEINSSALEQA 422

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           NVN+  E  DM    R + AN + ++ ++ +  T L++
Sbjct: 423 NVNLTTELIDMIIAQRNFQANSRALEVNNSLNQTILNI 460



 Score = 39.5 bits (90), Expect = 0.17,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 18/38 (47%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          S +IA SG++     + + + NIAN  T G       +
Sbjct: 2  SFNIALSGVSAAQKDLDVTANNIANVNTVGFKESRAEF 39


>gi|24051371|gb|AAN42702.1| flagellar hook protein FlgE [Shigella flexneri 2a str. 301]
          Length = 642

 Score = 47.6 bits (111), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 26/51 (50%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +     +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 591 NFGTLTNGALEASNVDLSKELVNMIVAQRNYKSNAQTIKTQDQILNTRVNL 641



 Score = 36.0 bits (81), Expect = 1.8,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 4/63 (6%)

Query: 7   SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
           +   A SGL   +  + +I  NIAN+ T G   G+  +               GV+V  I
Sbjct: 242 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFA----DMFAGSKVGLGVKVAGI 297

Query: 67  GVD 69
             D
Sbjct: 298 TQD 300


>gi|317153861|ref|YP_004121909.1| flagellar basal body rod protein [Desulfovibrio aespoeensis Aspo-2]
 gi|316944112|gb|ADU63163.1| flagellar basal body rod protein [Desulfovibrio aespoeensis Aspo-2]
          Length = 108

 Score = 47.6 bits (111), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 28/123 (22%), Positives = 41/123 (33%), Gaps = 19/123 (15%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
               S L+  S   Q+ + NIAN  T G +  S           E      GVRV  I  
Sbjct: 3   DTNLSALSALSTVQQVSANNIANVNTDGFSASS--------VTLESGPADQGVRVGSIRE 54

Query: 69  DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
                                V+  N ++  E   M  T   + AN+  ++ S DM    
Sbjct: 55  SSVPGPNIGG-----------VEGSNTDIGTEMVGMIRTGHAFSANVAAVRASEDMTGHL 103

Query: 129 LDL 131
           L++
Sbjct: 104 LNM 106


>gi|297568486|ref|YP_003689830.1| fagellar hook-basal body protein [Desulfurivibrio alkaliphilus
           AHT2]
 gi|296924401|gb|ADH85211.1| fagellar hook-basal body protein [Desulfurivibrio alkaliphilus
           AHT2]
          Length = 636

 Score = 47.6 bits (111), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 16/110 (14%), Positives = 36/110 (32%), Gaps = 4/110 (3%)

Query: 23  QIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHP 82
             I  N +N    G +           +    +        +         +     G  
Sbjct: 531 GTIVGNYSN----GQSHDQAQVMLADFANYHGLIPGSNNTYQASAQSGDPVIGTPGSGVF 586

Query: 83  VANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
                  ++  NV++  + AD+  T R++ AN ++I  + ++  T + L 
Sbjct: 587 GQVLGSSLEGSNVDLARQFADLTMTQRIFQANSKSITTADEIHQTLMRLK 636


>gi|148258440|ref|YP_001243025.1| putative flagellar hook protein FlgE [Bradyrhizobium sp. BTAi1]
 gi|146410613|gb|ABQ39119.1| putative flagellar hook protein FlgE [Bradyrhizobium sp. BTAi1]
          Length = 466

 Score = 47.6 bits (111), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 26/53 (49%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +      G V+  N +V  E + +  T + Y AN++ +  S  MM+  L+ +R
Sbjct: 414 NGATIVGGNVEASNSDVAGEFSKLIATQQAYSANVKVMTTSQQMMSDLLNAIR 466



 Score = 33.7 bits (75), Expect = 8.9,   Method: Composition-based stats.
 Identities = 14/37 (37%), Positives = 18/37 (48%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDT 38
            +  +   A SG+  QS  M  IS NIAN +T G  
Sbjct: 1  MSISTALLTAFSGMKAQSYAMANISGNIANTQTPGYK 37


>gi|4378858|gb|AAD19726.1| flagellar hook protein [Zymomonas mobilis subsp. mobilis ZM4]
          Length = 412

 Score = 47.6 bits (111), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 27/57 (47%)

Query: 75  EEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            E D     +  SG ++  N+++  E  ++    R + AN + I   + M++  +++
Sbjct: 354 READTSGLGSVQSGALELSNIDLTQELVNLISEQRNFQANSKAISTDNQMVSYVMNI 410


>gi|237753142|ref|ZP_04583622.1| flagellar hook protein FlgE [Helicobacter winghamensis ATCC
           BAA-430]
 gi|229375409|gb|EEO25500.1| flagellar hook protein FlgE [Helicobacter winghamensis ATCC
           BAA-430]
          Length = 758

 Score = 47.6 bits (111), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 14/89 (15%), Positives = 32/89 (35%)

Query: 45  RRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
              T +  E +  SG     +        +     G   + A+  ++  N ++      +
Sbjct: 670 AIATFANYEGLQESGSNLFAESANSGRATIGTAGTGGRASVAASKLEMSNADLSRGLTQL 729

Query: 105 RETNRLYMANLQTIKQSHDMMTTTLDLLR 133
               R + AN ++I  +  ++ T L L +
Sbjct: 730 IVVQRGFQANSKSITTADQVLNTLLGLKQ 758



 Score = 38.3 bits (87), Expect = 0.39,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 17/41 (41%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          ++ S     SG+      + + S NIAN  TTG       +
Sbjct: 1  MLRSLWSGVSGMQAHQIALDVESNNIANVNTTGFKYSRADF 41


>gi|167463161|ref|ZP_02328250.1| flagellar hook-basal body protein [Paenibacillus larvae subsp.
           larvae BRL-230010]
          Length = 275

 Score = 47.6 bits (111), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 20/46 (43%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             G ++  NVN+  E  ++    R +  + + +  S  MM    +L
Sbjct: 228 MQGYLEQSNVNLSDEMTELINVQRAFQLSSRAVTSSDSMMGLANNL 273


>gi|313895783|ref|ZP_07829337.1| flagellar hook-basal body complex protein FlhP domain protein
           [Selenomonas sp. oral taxon 137 str. F0430]
 gi|312975208|gb|EFR40669.1| flagellar hook-basal body complex protein FlhP domain protein
           [Selenomonas sp. oral taxon 137 str. F0430]
          Length = 117

 Score = 47.6 bits (111), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 26/44 (59%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  NV++  + +DM  T R + +N + I  S +M+ T +++ R
Sbjct: 74  LEMSNVDISDQFSDMIITQRGFQSNSKIITVSDEMLETLINMKR 117


>gi|163760754|ref|ZP_02167834.1| probable flagellar basal body rod protein [Hoeflea phototrophica
           DFL-43]
 gi|162282076|gb|EDQ32367.1| probable flagellar basal body rod protein [Hoeflea phototrophica
           DFL-43]
          Length = 112

 Score = 47.6 bits (111), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 31/127 (24%), Positives = 46/127 (36%), Gaps = 28/127 (22%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           + +  + A SG+A QS RM  I+ N+AN  T         Y RKT+       G      
Sbjct: 2   ISSIINTAFSGMAAQSKRMDAIASNVANVDTPD-------YNRKTVEMVTTAGGG----- 49

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
                          P    A ++       V++  E  DM E+   Y ANL  ++   D
Sbjct: 50  -----------VRAVPREAPAGSN-----SGVDLATELMDMAESKMAYEANLAVMETGMD 93

Query: 124 MMTTTLD 130
           M    + 
Sbjct: 94  MWDMLMS 100


>gi|68164544|gb|AAY87273.1| predicted flagellar basal body rod protein [uncultured bacterium
           BAC17H8]
          Length = 262

 Score = 47.6 bits (111), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 27/62 (43%), Gaps = 2/62 (3%)

Query: 66  IGVDQSTFVEEFDPGHPVANA--SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
           +  D S      +P          G ++  NVNV+ E  +M ET R Y  + ++I    +
Sbjct: 194 VETDTSGAPIVGNPQDAGLGRVIQGALESSNVNVVTELVEMIETQRAYEVSSKSITSVDE 253

Query: 124 MM 125
           M+
Sbjct: 254 ML 255



 Score = 45.6 bits (106), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/40 (42%), Positives = 23/40 (57%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
           +S H+A +GL  Q  RMQII+ N+AN  TTG       +
Sbjct: 3  TSSMHVAKTGLNAQQTRMQIIANNLANVNTTGFKRDRANF 42


>gi|254519436|ref|ZP_05131492.1| flagellar hook-associated protein 1 [Clostridium sp. 7_2_43FAA]
 gi|226913185|gb|EEH98386.1| flagellar hook-associated protein 1 [Clostridium sp. 7_2_43FAA]
          Length = 611

 Score = 47.6 bits (111), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 18/78 (23%), Positives = 26/78 (33%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  L ++ +IA  G+ VQ   + + S NIAN+ T G +                M  S  
Sbjct: 1  MSGLFSTFNIAKRGMNVQQKSIDVTSHNIANSNTVGYSRQRAKIETSRPFGGTSMGSSVQ 60

Query: 61 VRVKKIGVDQSTFVEEFD 78
                G          D
Sbjct: 61 AGQLGTGAQIRAIERVRD 78



 Score = 40.6 bits (93), Expect = 0.079,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 20/42 (47%), Gaps = 1/42 (2%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD-LLR 133
             V++  E A++ +    Y AN + I    +++   ++ L R
Sbjct: 570 SGVSLDEEMANLVQFQHAYNANAKIISTVDELLEVIINGLKR 611


>gi|322832564|ref|YP_004212591.1| flagellar hook-basal body protein [Rahnella sp. Y9602]
 gi|321167765|gb|ADW73464.1| flagellar hook-basal body protein [Rahnella sp. Y9602]
          Length = 414

 Score = 47.6 bits (111), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 31/83 (37%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            S  E +   G                    G   +  SG ++  NV++  E  +M    
Sbjct: 331 FSNPEGLKSEGDNVWTATASSGQAVTGIAGQGGLASMTSGALESSNVDLSAELVNMIVAQ 390

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y +N QTIK    ++ T ++L
Sbjct: 391 RNYQSNAQTIKTQDSILNTLVNL 413


>gi|332994162|gb|AEF04217.1| flagellar hook protein FlgE [Alteromonas sp. SN2]
          Length = 458

 Score = 47.6 bits (111), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 17/98 (17%), Positives = 36/98 (36%)

Query: 34  TTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
           + G +           + E+ +        K+  +       E   G      S  ++  
Sbjct: 360 SNGTSEPIVRVALVRFANEQGLTQQSSTEWKESILSGEALAGEATTGTFGEINSSALEQA 419

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           NVN+  E  DM    R + AN + ++ ++ +  T L++
Sbjct: 420 NVNLTTELIDMIIAQRNFQANSRALEVNNSLNQTILNI 457



 Score = 39.1 bits (89), Expect = 0.23,   Method: Composition-based stats.
 Identities = 12/38 (31%), Positives = 18/38 (47%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          S +IA SG+A     + + + NIAN  T G       +
Sbjct: 2  SFNIALSGVAAAQKDLDVTANNIANVNTVGFKESRAEF 39


>gi|209521589|ref|ZP_03270287.1| flagellar basal body FlaE domain protein [Burkholderia sp. H160]
 gi|209497972|gb|EDZ98129.1| flagellar basal body FlaE domain protein [Burkholderia sp. H160]
          Length = 502

 Score = 47.6 bits (111), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 37/109 (33%), Gaps = 4/109 (3%)

Query: 23  QIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHP 82
             ++ N +N +T                  ++ +   G          ST        + 
Sbjct: 398 GTLTGNYSNGQTAALGQIVLANFSNQNGLVDLGNNEYGQTAASGVAQISTP----GSTNH 453

Query: 83  VANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
                G V+  NV++  E  ++    R Y AN QTIK    +  T ++L
Sbjct: 454 GVLQGGAVENSNVDLTSELVNLITAQRNYQANAQTIKTQQAVDQTLINL 502


>gi|160939651|ref|ZP_02086999.1| hypothetical protein CLOBOL_04543 [Clostridium bolteae ATCC
           BAA-613]
 gi|158437442|gb|EDP15206.1| hypothetical protein CLOBOL_04543 [Clostridium bolteae ATCC
           BAA-613]
          Length = 244

 Score = 47.6 bits (111), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 19/42 (45%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           ++  N N+  E  ++ +T R +  N + +  +  M     +L
Sbjct: 202 LEMSNCNMSTEMVNLMQTQRAFQLNSRIVTTADQMEEMINNL 243


>gi|332305615|ref|YP_004433466.1| flagellar hook-basal body protein [Glaciecola agarilytica
           4H-3-7+YE-5]
 gi|332172944|gb|AEE22198.1| flagellar hook-basal body protein [Glaciecola agarilytica
           4H-3-7+YE-5]
          Length = 460

 Score = 47.6 bits (111), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 18/127 (14%), Positives = 43/127 (33%), Gaps = 13/127 (10%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           +    I   GL      ++    N       G +           + ++ +      + +
Sbjct: 346 LTGIDIGADGL------VRATYSN-------GTSEPIIRVALVRFANDQGLTQQSNTQWQ 392

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           +  +       E   G      S  ++  NVN+  E  D+    R + AN + ++ ++ +
Sbjct: 393 ESILSGEALAGEATTGTFGDINSSALEQANVNLTTELIDLIIAQRNFQANSRALEVNNQL 452

Query: 125 MTTTLDL 131
             T L++
Sbjct: 453 NQTILNI 459



 Score = 39.5 bits (90), Expect = 0.17,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 17/38 (44%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          S +IA SG++     +   + NIAN  T G       +
Sbjct: 2  SFNIALSGVSAAQRDLDTTANNIANVNTVGFKESRAEF 39


>gi|296122946|ref|YP_003630724.1| hypothetical protein Plim_2702 [Planctomyces limnophilus DSM 3776]
 gi|296015286|gb|ADG68525.1| protein of unknown function DUF1078 domain protein [Planctomyces
           limnophilus DSM 3776]
          Length = 256

 Score = 47.6 bits (111), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 13/83 (15%), Positives = 31/83 (37%), Gaps = 8/83 (9%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                E+     G+   K+ V ++                G V+  N + +  T ++ E 
Sbjct: 177 PTRLTELQKRGDGMYSTKLPVAEAPPETRV--------RQGFVEASNADPMQGTLELIEV 228

Query: 108 NRLYMANLQTIKQSHDMMTTTLD 130
           +R + +N+  ++   +M+   L 
Sbjct: 229 SRGFESNVNMMRMQDEMLGRLLQ 251


>gi|254457547|ref|ZP_05070975.1| flagellar hook protein FlgE [Campylobacterales bacterium GD 1]
 gi|207086339|gb|EDZ63623.1| flagellar hook protein FlgE [Campylobacterales bacterium GD 1]
          Length = 705

 Score = 47.6 bits (111), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 15/99 (15%), Positives = 32/99 (32%)

Query: 34  TTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
           + G + G         +  E +   GG    +        +            +  ++  
Sbjct: 606 SNGRSFGLAQIGMAKFTNNEGLSVEGGNIFIQTANSGDPIIGTAATAGRGFIQAAALEAS 665

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           NV++      +    R + AN +TI  S  ++ T + L 
Sbjct: 666 NVDLSRALTQLIIIQRGFQANGKTITTSDQLLQTLIGLK 704


>gi|212640499|ref|YP_002317019.1| flagellar basal body rod protein [Anoxybacillus flavithermus WK1]
 gi|212561979|gb|ACJ35034.1| Flagellar basal body rod protein [Anoxybacillus flavithermus WK1]
          Length = 262

 Score = 47.6 bits (111), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 10/61 (16%), Positives = 22/61 (36%), Gaps = 1/61 (1%)

Query: 74  VEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH-DMMTTTLDLL 132
            ++  P          ++  NV++     DM    R + AN + ++     M     ++ 
Sbjct: 200 EQQLPPAETYTIRQQHIERSNVDLSRTMTDMLSAYRAFEANQKILQAYDKSMDKAANEIG 259

Query: 133 R 133
           R
Sbjct: 260 R 260



 Score = 40.6 bits (93), Expect = 0.064,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 23/55 (41%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          +    + A SG+  Q  R+++++ NIANA T G        R         +  +
Sbjct: 1  MFRGLYTAASGMLSQQRRIEMMTNNIANANTPGYKADQASLRAFPEMLMHRIQQT 55


>gi|330961196|gb|EGH61456.1| flagellar hook protein FlgE [Pseudomonas syringae pv. maculicola
           str. ES4326]
          Length = 442

 Score = 47.6 bits (111), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 19/119 (15%), Positives = 41/119 (34%), Gaps = 6/119 (5%)

Query: 13  SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQST 72
           S + V          N+    T G +         + +  + +  +GG   ++       
Sbjct: 329 SAMNVDRT------GNLFATYTNGQSKTIGQTSLTSFANVQGLAQAGGTNWRETFDSGVP 382

Query: 73  FVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
                  G         ++  NV++ +E  ++ +    Y AN +TI     +M TT+ +
Sbjct: 383 VSGAPQSGTLGYITGQALEESNVDLTMELVNLIKAQSNYQANAKTISTQSTIMQTTIQM 441



 Score = 33.7 bits (75), Expect = 9.8,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 17/39 (43%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          S +I  SGL   +  + +   NIAN  TTG       + 
Sbjct: 2  SFNIGLSGLYAANKSLDVTGNNIANVATTGFKSSRTEFA 40


>gi|313650475|gb|EFS14882.1| flagellar basal-body rod protein flgC [Shigella flexneri 2a str.
           2457T]
 gi|332092840|gb|EGI97908.1| flagellar basal-body rod protein flgC [Shigella dysenteriae 155-74]
 gi|332758233|gb|EGJ88556.1| flagellar basal-body rod protein flgC [Shigella flexneri 4343-70]
 gi|332759610|gb|EGJ89915.1| flagellar basal-body rod protein flgC [Shigella flexneri 2747-71]
 gi|332761419|gb|EGJ91703.1| flagellar basal-body rod protein flgC [Shigella flexneri K-671]
 gi|332767681|gb|EGJ97874.1| hypothetical protein SF293071_1335 [Shigella flexneri 2930-71]
 gi|333004883|gb|EGK24403.1| flagellar basal-body rod protein flgC [Shigella flexneri VA-6]
 gi|333005580|gb|EGK25098.1| flagellar basal-body rod protein flgC [Shigella flexneri K-218]
 gi|333008276|gb|EGK27750.1| flagellar basal-body rod protein flgC [Shigella flexneri K-272]
 gi|333019432|gb|EGK38715.1| flagellar basal-body rod protein flgC [Shigella flexneri K-304]
 gi|333019766|gb|EGK39038.1| flagellar basal-body rod protein flgC [Shigella flexneri K-227]
          Length = 42

 Score = 47.2 bits (110), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 14/42 (33%), Positives = 22/42 (52%)

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            PNV+V+ E  +    +R Y AN++ +     MM  TL L +
Sbjct: 1   MPNVDVVGEMVNTMSASRSYQANVEVLNTVKSMMLKTLTLGQ 42


>gi|330809244|ref|YP_004353706.1| flagellar hook protein FlgE [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327377352|gb|AEA68702.1| putative flagellar hook protein FlgE [Pseudomonas brassicacearum
           subsp. brassicacearum NFM421]
          Length = 392

 Score = 47.2 bits (110), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 22/45 (48%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             G ++  NV++  E  D+    R Y A+ + +  S++M+    +
Sbjct: 343 QGGYLELSNVDLAQEFGDILIIQRGYQASSRVMTVSNEMLEQLYN 387


>gi|163789629|ref|ZP_02184067.1| flagellar hook-basal body complex protein [Carnobacterium sp. AT7]
 gi|159875161|gb|EDP69227.1| flagellar hook-basal body complex protein [Carnobacterium sp. AT7]
          Length = 252

 Score = 47.2 bits (110), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 9/83 (10%), Positives = 29/83 (34%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
           T     + +      + ++G    T                 ++  NV  + E  ++ + 
Sbjct: 165 TGMSLMITNFDDTAGLTRVGDTLFTGQGGTVQTGGTVVQQSYLETSNVETVDEITNLMQV 224

Query: 108 NRLYMANLQTIKQSHDMMTTTLD 130
           +R + AN + +  + + +   ++
Sbjct: 225 SRAFEANQKALSAADETLRKAVN 247


>gi|78776765|ref|YP_393080.1| flagellar hook-associated protein FlgK [Sulfurimonas denitrificans
           DSM 1251]
 gi|78497305|gb|ABB43845.1| Flagellar hook-associated protein [Sulfurimonas denitrificans DSM
           1251]
          Length = 628

 Score = 47.2 bits (110), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 11/70 (15%), Positives = 22/70 (31%)

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
             I   ++    +       A          V++  E  ++ +    Y A  + I     
Sbjct: 559 VGIRTKEAILNNQTITAQFNATELEYSSISKVSIDEELTNLIKYQTSYGAASKIITTIDQ 618

Query: 124 MMTTTLDLLR 133
           MM T L + +
Sbjct: 619 MMQTLLGIKQ 628



 Score = 39.9 bits (91), Expect = 0.11,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 25/72 (34%)

Query: 3  YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
           +  S  I  SGL+   A +   S NI NA + G T         T       +   G +
Sbjct: 4  SIFNSLSIGYSGLSAAQAGVSTTSHNITNAESEGYTRQRVVTAAATPVNMAPGNVGNGTQ 63

Query: 63 VKKIGVDQSTFV 74
          +  I      FV
Sbjct: 64 IMDIARIFDNFV 75


>gi|291280513|ref|YP_003497348.1| flagellar hook-associated protein 1 FlgK [Deferribacter
           desulfuricans SSM1]
 gi|290755215|dbj|BAI81592.1| flagellar hook-associated protein 1 FlgK [Deferribacter
           desulfuricans SSM1]
          Length = 584

 Score = 47.2 bits (110), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 22/130 (16%), Positives = 44/130 (33%), Gaps = 13/130 (10%)

Query: 14  GLAVQSARMQIISEN----IANARTTGDTPGSDPYRRKTISFEEVMHGSG-------GVR 62
           G   ++  +  I +N    IA ++T              + F EV    G          
Sbjct: 448 GTDAKTIELNDIVKNDNSFIATSKTGEPGDNQIALAISNLKFNEVFDEKGVTFDQFYTTF 507

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGI--VKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V +I  D+       D      N   +   +   V++  E  ++ +  + Y AN + I  
Sbjct: 508 VSQIASDKKQVDTFVDAKKEAVNQLTLKLDEVKGVSLDEEFTNLIKFQKAYEANARFITA 567

Query: 121 SHDMMTTTLD 130
             +M+   ++
Sbjct: 568 VDEMLDRLIN 577



 Score = 39.5 bits (90), Expect = 0.18,   Method: Composition-based stats.
 Identities = 14/66 (21%), Positives = 21/66 (31%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  +        SGL V  A + +   NIAN  T G +        +            G
Sbjct: 1  MPNIFGIFQTGVSGLMVSQAGIDVTGHNIANVNTEGYSRQRLSIETEIPLLIHPGPFGRG 60

Query: 61 VRVKKI 66
           +V  +
Sbjct: 61 AKVSSV 66


>gi|26991077|ref|NP_746502.1| flagellar hook protein FlgE [Pseudomonas putida KT2440]
 gi|24986112|gb|AAN69966.1|AE016635_2 flagellar hook protein FlgE [Pseudomonas putida KT2440]
          Length = 440

 Score = 47.2 bits (110), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 31/77 (40%)

Query: 55  MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
           +   GG   K+        +   D G     + G ++  NV++  E  ++ +    Y AN
Sbjct: 363 LTPIGGTNWKESYASGVPVIGAPDTGTLGQISGGALEDSNVDLTGELVNLIKAQSNYQAN 422

Query: 115 LQTIKQSHDMMTTTLDL 131
            +TI     +M T + +
Sbjct: 423 AKTISTESTIMQTIIQM 439



 Score = 38.7 bits (88), Expect = 0.28,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 31/82 (37%), Gaps = 2/82 (2%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          S +I  SGL   +  + +   NIAN  TTG       +  +      +   S G  V   
Sbjct: 2  SFNIGLSGLYAANKALNVTGNNIANVATTGFKSSRAEFADQ--YSNSIRGTSAGKTVIGT 59

Query: 67 GVDQSTFVEEFDPGHPVANASG 88
          GV  +   + F PG+  A    
Sbjct: 60 GVKTAAVSQLFTPGNINATGQA 81


>gi|127512280|ref|YP_001093477.1| flagellar basal body rod protein FlgF [Shewanella loihica PV-4]
 gi|126637575|gb|ABO23218.1| flagellar basal-body rod protein FlgF [Shewanella loihica PV-4]
          Length = 247

 Score = 47.2 bits (110), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 12/50 (24%), Positives = 25/50 (50%)

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           A  SG ++  NVN + E   + +  R +   ++ +K + +M   +  L+R
Sbjct: 196 AVESGAIEGSNVNAVDEMVSLIDLQRQFEMQVKMMKTAEEMDQASSSLMR 245


>gi|90411006|ref|ZP_01219020.1| putative flagellar basal-body rod protein FlgF [Photobacterium
           profundum 3TCK]
 gi|90328219|gb|EAS44530.1| putative flagellar basal-body rod protein FlgF [Photobacterium
           profundum 3TCK]
          Length = 249

 Score = 47.2 bits (110), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 23/47 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NVN + E   M +  R +   ++ +K + +M   +  LLR
Sbjct: 201 KGALEGSNVNAVGEMTSMIDLQRHFEMQVKIMKTAEEMDQASASLLR 247


>gi|153948570|ref|YP_001399634.1| flagellar hook protein FlgE [Yersinia pseudotuberculosis IP 31758]
 gi|152960065|gb|ABS47526.1| flagellar hook protein flgE [Yersinia pseudotuberculosis IP 31758]
          Length = 402

 Score = 47.2 bits (110), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 21/47 (44%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
            SG ++  NV++  E   +    R Y A+ + I  +  MM     +L
Sbjct: 356 ESGALENSNVDITAELVGLMTAQRNYQASTKIISTNDSMMNALFQVL 402



 Score = 39.5 bits (90), Expect = 0.16,   Method: Composition-based stats.
 Identities = 20/88 (22%), Positives = 31/88 (35%), Gaps = 1/88 (1%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          S  IAN+ L   + ++  IS NIAN+ T G       +       + +     GV  + I
Sbjct: 2  SFSIANTALNAHTEQLNTISNNIANSATKGFKASRTEFASMYAQSQPLGVTVSGVS-QNI 60

Query: 67 GVDQSTFVEEFDPGHPVANASGIVKYPN 94
          G D             ++     V   N
Sbjct: 61 GKDGQKDKTGMGLDLAISGGGFFVVREN 88


>gi|300024588|ref|YP_003757199.1| flagellar hook-basal body protein [Hyphomicrobium denitrificans
           ATCC 51888]
 gi|299526409|gb|ADJ24878.1| flagellar hook-basal body protein [Hyphomicrobium denitrificans
           ATCC 51888]
          Length = 417

 Score = 47.2 bits (110), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 18/114 (15%), Positives = 39/114 (34%), Gaps = 1/114 (0%)

Query: 21  RMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVE-EFDP 79
           R++I ++ I  A     +                   +    V     +         + 
Sbjct: 304 RLEISAQGIVTAVYADGSRVDAFKIPLANVASPDNLTAISGNVFATNKESGDLQLGTANS 363

Query: 80  GHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G      SG ++  +V++  E   M E  R Y AN +  +   +++   ++L+R
Sbjct: 364 GSLGKIVSGALEKSSVDLASELTTMVEAQRSYTANSKVFQTGTELLDVLVNLVR 417



 Score = 43.7 bits (101), Expect = 0.009,   Method: Composition-based stats.
 Identities = 22/90 (24%), Positives = 33/90 (36%), Gaps = 2/90 (2%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            L      + SG+AVQS RM  +++NIAN  TTG    S  +           +  G V
Sbjct: 1  MGLYGLMTTSISGMAVQSDRMGTVADNIANVNTTGYKEASAEFATLVAEGHVASYVPGSV 60

Query: 62 RV--KKIGVDQSTFVEEFDPGHPVANASGI 89
              ++    Q        P     + +G 
Sbjct: 61 STIARRAVTHQGDLSYTNSPTDLAVSGNGF 90


>gi|77460469|ref|YP_349976.1| flagellar hook protein FlgE [Pseudomonas fluorescens Pf0-1]
 gi|77384472|gb|ABA75985.1| putative flagellar hook protein [Pseudomonas fluorescens Pf0-1]
          Length = 443

 Score = 47.2 bits (110), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 39/109 (35%), Gaps = 4/109 (3%)

Query: 23  QIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHP 82
             +  N +N ++             + + E+ +   GG   K+         +    G  
Sbjct: 338 GTLFANFSNNQSKA----IGQVALASFTNEQGLQPIGGTGWKETFASGVPGYDAPKTGTL 393

Query: 83  VANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
               S  ++  NVN+  E  D+ +    Y AN +TI     +M T + +
Sbjct: 394 GEVVSNSLEESNVNLTNELVDLIKGQSNYQANAKTISTQSTIMQTIIQM 442



 Score = 34.5 bits (77), Expect = 4.8,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 17/38 (44%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          S +I  SGL   + ++ +   NIAN  T G       +
Sbjct: 2  SFNIGLSGLYAANKQLDVTGNNIANVATAGFKSSRAEF 39


>gi|212640498|ref|YP_002317018.1| flagellar hook-basal body protein [Anoxybacillus flavithermus WK1]
 gi|212561978|gb|ACJ35033.1| Flagellar hook-basal body protein [Anoxybacillus flavithermus WK1]
          Length = 274

 Score = 47.2 bits (110), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 17/106 (16%), Positives = 37/106 (34%), Gaps = 1/106 (0%)

Query: 29  IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASG 88
           IA       T              + +  +       + V+ +T     +  + ++    
Sbjct: 170 IAPNGNIMQTVNIGVSYITRPQLMQALGDNRFAFPNGLNVEDATINLAGNNRNNISLQQY 229

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
            ++  NV +  E +++  T R Y  N + I  S  MM   ++ +R 
Sbjct: 230 ALEQSNVELATEMSELMITQRSYQLNARAITLSDQMMG-LINGIRS 274


>gi|313497761|gb|ADR59127.1| FlgE [Pseudomonas putida BIRD-1]
          Length = 440

 Score = 47.2 bits (110), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 31/77 (40%)

Query: 55  MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
           +   GG   K+        +   D G     + G ++  NV++  E  ++ +    Y AN
Sbjct: 363 LTPIGGTNWKESYASGVPVIGAPDTGTLGQISGGALEDSNVDLTGELVNLIKAQSNYQAN 422

Query: 115 LQTIKQSHDMMTTTLDL 131
            +TI     +M T + +
Sbjct: 423 AKTISTESTIMQTIIQM 439



 Score = 38.7 bits (88), Expect = 0.28,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 31/82 (37%), Gaps = 2/82 (2%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          S +I  SGL   +  + +   NIAN  TTG       +  +      +   S G  V   
Sbjct: 2  SFNIGLSGLYAANKALNVTGNNIANVATTGFKSSRAEFADQ--YSNSIRGTSAGKTVIGT 59

Query: 67 GVDQSTFVEEFDPGHPVANASG 88
          GV  +   + F PG+  A    
Sbjct: 60 GVKTAAVSQLFTPGNINATGQA 81


>gi|302037627|ref|YP_003797949.1| flagellar basal-body rod protein FlgF [Candidatus Nitrospira
           defluvii]
 gi|300605691|emb|CBK42024.1| Flagellar basal-body rod protein FlgF [Candidatus Nitrospira
           defluvii]
          Length = 255

 Score = 47.2 bits (110), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 1/53 (1%)

Query: 82  PVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL-DLLR 133
                SG ++  NVN L E   M +  R Y +  + I+    M  T + DL R
Sbjct: 201 RPQVQSGHIEESNVNSLSEMVKMMQGMRSYESAQKLIQTMDRMTETAIQDLGR 253


>gi|157376215|ref|YP_001474815.1| flagellar basal body rod protein FlgF [Shewanella sediminis
           HAW-EB3]
 gi|157318589|gb|ABV37687.1| flagellar basal-body rod protein FlgF [Shewanella sediminis
           HAW-EB3]
          Length = 247

 Score = 47.2 bits (110), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 25/48 (52%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            SG V+  NVN + E  ++ +  R +   ++ +K + +M   +  L+R
Sbjct: 198 ESGAVEGSNVNAVDEMVNLIDIQRQFEMQVKMMKTAEEMDKASSSLMR 245


>gi|303325592|ref|ZP_07356035.1| flagellar hook-associated protein FlgK [Desulfovibrio sp. 3_1_syn3]
 gi|302863508|gb|EFL86439.1| flagellar hook-associated protein FlgK [Desulfovibrio sp. 3_1_syn3]
          Length = 710

 Score = 47.2 bits (110), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 19/41 (46%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             VN+  E +++ +    Y A  + I  +  M+ T L L +
Sbjct: 670 SGVNMDEEMSNLIKFQHSYTAAAKLITTADQMLQTLLGLKQ 710



 Score = 36.8 bits (83), Expect = 0.94,   Method: Composition-based stats.
 Identities = 11/35 (31%), Positives = 16/35 (45%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDT 38
          L    +I  S L    A + +   N+ANA T G +
Sbjct: 2  LYGLLNIGQSALNASQAWISVTGNNLANADTEGYS 36


>gi|146281771|ref|YP_001171924.1| flagellar hook protein FlgE [Pseudomonas stutzeri A1501]
 gi|145569976|gb|ABP79082.1| flagellar hook protein FlgE [Pseudomonas stutzeri A1501]
          Length = 438

 Score = 47.2 bits (110), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 14/83 (16%), Positives = 33/83 (39%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +  + +   GG    +        +     G   +  SG ++  NV++  +  ++    
Sbjct: 355 FTNSQGLASVGGTAWAQTLASGEPAIGTPGSGTLGSLQSGALEDSNVDLTAQLVNLIVAQ 414

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y AN +T++    +  T ++L
Sbjct: 415 RNYQANAKTVETESAIAQTIINL 437



 Score = 35.2 bits (79), Expect = 2.7,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 18/39 (46%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          + ++A SGL   S  + +   NIAN  TTG       + 
Sbjct: 2  TFNVALSGLNAASTDLNVTGNNIANVGTTGFKASRAEFA 40


>gi|330875983|gb|EGH10132.1| flagellar hook protein FlgE [Pseudomonas syringae pv. morsprunorum
           str. M302280PT]
          Length = 441

 Score = 47.2 bits (110), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 31/77 (40%)

Query: 55  MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
           +  +GG   ++              G   +     ++  NV++ +E  ++ +    Y AN
Sbjct: 364 LAQAGGTNWRETFASGVPVSGTPQSGTLGSITGQALEESNVDLTMELVNLIKAQSNYQAN 423

Query: 115 LQTIKQSHDMMTTTLDL 131
            +TI     +M TT+ +
Sbjct: 424 AKTISTQSTIMQTTIQM 440


>gi|300311352|ref|YP_003775444.1| flagellar basal-body rod protein FlgE [Herbaspirillum seropedicae
           SmR1]
 gi|300074137|gb|ADJ63536.1| flagellar basal-body rod FlgE protein [Herbaspirillum seropedicae
           SmR1]
          Length = 432

 Score = 47.2 bits (110), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 18/83 (21%), Positives = 31/83 (37%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +    +   G    +      S  V +   G      +   +  NV++  E  +M    
Sbjct: 349 FANPNGLQPLGNNLYQASSAAGSPLVGKPTTGTFGTLQARAKEDSNVDLTAELVNMIVAQ 408

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R+Y AN QTIK    ++ T + L
Sbjct: 409 RVYQANSQTIKVQDTVLQTLVSL 431


>gi|260772275|ref|ZP_05881191.1| flagellar basal-body rod protein FlgF [Vibrio metschnikovii CIP
           69.14]
 gi|260611414|gb|EEX36617.1| flagellar basal-body rod protein FlgF [Vibrio metschnikovii CIP
           69.14]
          Length = 249

 Score = 47.2 bits (110), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 12/62 (19%), Positives = 27/62 (43%)

Query: 72  TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
               E+     V   +G ++  NVN + E  ++ +  R +   ++ +  + +M   +  L
Sbjct: 186 DPNAEYVADATVKVLTGALEGSNVNAVGEMTNLIDLQRQFEMQVKMMSTAEEMDKASDSL 245

Query: 132 LR 133
           LR
Sbjct: 246 LR 247


>gi|209549487|ref|YP_002281404.1| hypothetical protein Rleg2_1893 [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209535243|gb|ACI55178.1| protein of unknown function DUF1078 domain protein [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 101

 Score = 47.2 bits (110), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 44/133 (33%), Gaps = 32/133 (24%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             +    + A SG+  Q+ R+  I+ N+AN+ T+G       Y R   S   V  G    
Sbjct: 1   MSISGITNTALSGMRAQTPRIGAIANNVANSSTSG-------YARLNTSLTSVASGGVQA 53

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
            V                              +V+   E  D+ +  + Y AN    +  
Sbjct: 54  TVSPT-------------------------ASDVDPATELTDLLQAEQSYKANAVVFETG 88

Query: 122 HDMMTTTLDLLRD 134
            DM    + + RD
Sbjct: 89  ADMWEMLMSIKRD 101


>gi|239628977|ref|ZP_04672008.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239519123|gb|EEQ58989.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 255

 Score = 47.2 bits (110), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 7/42 (16%), Positives = 19/42 (45%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           ++  N ++  E  ++ +T R +  N + +  +  M     +L
Sbjct: 213 LEMSNADMSTEMVNLMQTQRAFQLNSRIVSTADQMEEMINNL 254


>gi|56551507|ref|YP_162346.1| hypothetical protein ZMO0611 [Zymomonas mobilis subsp. mobilis ZM4]
 gi|56543081|gb|AAV89235.1| protein of unknown function DUF1078 domain protein [Zymomonas
           mobilis subsp. mobilis ZM4]
          Length = 411

 Score = 47.2 bits (110), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 27/57 (47%)

Query: 75  EEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            E D     +  SG ++  N+++  E  ++    R + AN + I   + M++  +++
Sbjct: 353 READTSGLGSVQSGALELSNIDLTQELVNLISEQRNFQANSKAISTDNQMVSYVMNI 409



 Score = 33.7 bits (75), Expect = 9.5,   Method: Composition-based stats.
 Identities = 9/58 (15%), Positives = 21/58 (36%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          + + + +GL      + + S NIAN+ + G    +  +             + G   +
Sbjct: 2  AFYTSLTGLNAAQTDLSVTSNNIANSGSYGFKKTTTDFGELVADSPLASGQNIGQGTR 59


>gi|118581855|ref|YP_903105.1| flagellar hook-associated protein FlgK [Pelobacter propionicus DSM
           2379]
 gi|118504565|gb|ABL01048.1| flagellar hook-associated protein FlgK [Pelobacter propionicus DSM
           2379]
          Length = 456

 Score = 47.2 bits (110), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 24/122 (19%), Positives = 44/122 (36%), Gaps = 3/122 (2%)

Query: 13  SGLAVQSARMQII-SENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQS 71
           SG +  +  + I    NIA A ++   PG +         +     S    V +IG+D  
Sbjct: 334 SGTSAATFSVSITDPNNIAAAGSSAAAPGGNGNALLIADLQSGFSISYNTLVSQIGLDVD 393

Query: 72  TFVEEFDPGHPVANASGIVK--YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
                 +           ++     V++  E  ++    R Y A+ + I    +MM T L
Sbjct: 394 QAETVVEQDEAYLKQLNTLRDSKSGVSLDEELTNLVMYQRSYQASAKLITTVTEMMDTLL 453

Query: 130 DL 131
            +
Sbjct: 454 AM 455



 Score = 35.2 bits (79), Expect = 2.8,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 23/67 (34%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            L ++  I   GL +     ++  ENIAN  T G +           +         GV
Sbjct: 1  MGLSSAMEIGKRGLIIYQVATEVTGENIANVNTEGYSRQRVILETSPPTTHNGFPLGTGV 60

Query: 62 RVKKIGV 68
          ++  +  
Sbjct: 61 KISTVER 67


>gi|237752943|ref|ZP_04583423.1| flagellar hook-associated protein FlgK [Helicobacter winghamensis
           ATCC BAA-430]
 gi|229375210|gb|EEO25301.1| flagellar hook-associated protein FlgK [Helicobacter winghamensis
           ATCC BAA-430]
          Length = 608

 Score = 47.2 bits (110), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 19/106 (17%), Positives = 29/106 (27%), Gaps = 2/106 (1%)

Query: 29  IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHP--VANA 86
           IAN               K    EE + G       K+  +                A  
Sbjct: 502 IANKMQQLQFDKITFTDYKGEQREETISGYFRYIAGKVASETQATQTTQSTKEAVYSATK 561

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
                   V+V  E  ++      Y AN + I    +M+ T L + 
Sbjct: 562 QEYKALCEVSVDDELVNLIRFQSGYSANAKMITTIDEMINTLLGIK 607



 Score = 38.7 bits (88), Expect = 0.28,   Method: Composition-based stats.
 Identities = 12/73 (16%), Positives = 27/73 (36%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  L++S +   +GL      + +   NIANA     +        +T  +++      G
Sbjct: 1  MGGLLSSLNTPYTGLTGHQVMVDVTGNNIANANNEFYSRQVVRSSAQTPLWKQNYALGQG 60

Query: 61 VRVKKIGVDQSTF 73
          + +  +      +
Sbjct: 61 LNILTVERVHDEY 73


>gi|254437698|ref|ZP_05051192.1| flagellar basal-body rod protein FlgG [Octadecabacter antarcticus
           307]
 gi|198253144|gb|EDY77458.1| flagellar basal-body rod protein FlgG [Octadecabacter antarcticus
           307]
          Length = 257

 Score = 47.2 bits (110), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 18/78 (23%), Positives = 30/78 (38%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
           T +    +   G   V +     +  V             G ++  NVNV+ +  +M ET
Sbjct: 173 TFANPRGLQPIGESFVVETTASGAATVAAPQSQGLGKLMQGALEASNVNVVQQLVEMIET 232

Query: 108 NRLYMANLQTIKQSHDMM 125
            R Y  + + I  S +MM
Sbjct: 233 QRAYEVSSKAITSSDEMM 250



 Score = 38.7 bits (88), Expect = 0.28,   Method: Composition-based stats.
 Identities = 13/37 (35%), Positives = 20/37 (54%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
           H+A +GL  Q  RMQ+I+ N++N  T G       +
Sbjct: 1  MHVAKTGLNAQQTRMQVIANNLSNLNTVGFKSDRVNF 37


>gi|170744543|ref|YP_001773198.1| flagellar hook protein FlgE [Methylobacterium sp. 4-46]
 gi|168198817|gb|ACA20764.1| protein of unknown function DUF1078 domain protein
           [Methylobacterium sp. 4-46]
          Length = 407

 Score = 47.2 bits (110), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 33/82 (40%)

Query: 52  EEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
            + +    G   +      +  V   + G      SG ++  NV+V  E   M  +  +Y
Sbjct: 326 PDNLKPRAGNVYETTLESGALQVGFANQGGRGGIVSGALEQSNVDVSTELTSMIASQTVY 385

Query: 112 MANLQTIKQSHDMMTTTLDLLR 133
            AN +    S++M+ T + L R
Sbjct: 386 TANSKVFMTSNEMLDTLMQLKR 407



 Score = 41.0 bits (94), Expect = 0.055,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 26/59 (44%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
            L+ +     SG+  QS R+  ++EN+ NA TTG    S  +    +S       + G
Sbjct: 1  MSLLGALRTGMSGMNAQSNRISTVAENVQNAGTTGYKRVSTEFSSLLLSSSATGDYNSG 59


>gi|241204820|ref|YP_002975916.1| hypothetical protein Rleg_2100 [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240858710|gb|ACS56377.1| protein of unknown function DUF1078 domain protein [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 101

 Score = 47.2 bits (110), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 30/133 (22%), Positives = 41/133 (30%), Gaps = 32/133 (24%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             L   A  A SG+  Q+ R+  I+ NIAN  T         Y R   S   V+ G    
Sbjct: 1   MSLSDIASTALSGMRAQATRVSAIANNIANTSTPD-------YARLNTSLTSVVSGGVQA 53

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
            V                               V+   E  D+ E  + Y AN    +  
Sbjct: 54  VVSPT-------------------------TSEVDQATELTDLIEAEQSYKANAVVFETG 88

Query: 122 HDMMTTTLDLLRD 134
            DM    + + RD
Sbjct: 89  ADMWEMLMSIKRD 101


>gi|168703389|ref|ZP_02735666.1| hypothetical protein GobsU_27906 [Gemmata obscuriglobus UQM 2246]
          Length = 430

 Score = 47.2 bits (110), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 14/85 (16%), Positives = 35/85 (41%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            + E+ +  SG    +         +     G   +   G ++  NV++ +E + +    
Sbjct: 346 FNNEDGLLRSGNNYFRSSVASGEALIGLAGQGGRGSLMGGALESSNVDIAIEFSRLIVAQ 405

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R +  N +TI  ++D +    +++R
Sbjct: 406 RGFQVNARTISSTNDTLQELANIIR 430



 Score = 35.6 bits (80), Expect = 2.6,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 21/41 (51%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          + +  + +SGL   S+ + +I  N+AN  TTG       +R
Sbjct: 3  LNALFVGSSGLTTNSSALDVIGNNLANINTTGYKDQRMVFR 43


>gi|260774938|ref|ZP_05883839.1| flagellar hook protein FlgE [Vibrio coralliilyticus ATCC BAA-450]
 gi|260609193|gb|EEX35351.1| flagellar hook protein FlgE [Vibrio coralliilyticus ATCC BAA-450]
          Length = 434

 Score = 47.2 bits (110), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 14/84 (16%), Positives = 35/84 (41%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
            +  E+ +   GG +        +    E + G     +SG+++  N+++  E  D+   
Sbjct: 350 RVPNEQGLDKKGGTQWDSTQFSGNKIWGESNKGSFGTISSGVLEQANIDMTQELVDLISA 409

Query: 108 NRLYMANLQTIKQSHDMMTTTLDL 131
            R + AN ++++  +      L +
Sbjct: 410 QRNFQANSRSLEVHNQTQQNILQI 433



 Score = 39.1 bits (89), Expect = 0.19,   Method: Composition-based stats.
 Identities = 12/35 (34%), Positives = 16/35 (45%)

Query: 10 IANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +A SGL+     +   S NIANA T G       +
Sbjct: 4  VALSGLSAAQLDLNTTSNNIANANTYGFKESRAEF 38


>gi|330967090|gb|EGH67350.1| flagellar hook protein FlgE [Pseudomonas syringae pv. actinidiae
           str. M302091]
          Length = 441

 Score = 46.8 bits (109), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 31/77 (40%)

Query: 55  MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
           +  +GG   ++              G   +     ++  NV++ +E  ++ +    Y AN
Sbjct: 364 LAQAGGTNWRETFASGVPVSGTPQSGTLGSITGQALEESNVDLTMELVNLIKAQSNYQAN 423

Query: 115 LQTIKQSHDMMTTTLDL 131
            +TI     +M TT+ +
Sbjct: 424 AKTISTQSTIMQTTIQM 440


>gi|237799206|ref|ZP_04587667.1| flagellar hook protein FlgE [Pseudomonas syringae pv. oryzae str.
           1_6]
 gi|237806225|ref|ZP_04592929.1| flagellar hook protein FlgE [Pseudomonas syringae pv. oryzae str.
           1_6]
 gi|331022061|gb|EGI02118.1| flagellar hook protein FlgE [Pseudomonas syringae pv. oryzae str.
           1_6]
 gi|331027338|gb|EGI07393.1| flagellar hook protein FlgE [Pseudomonas syringae pv. oryzae str.
           1_6]
          Length = 442

 Score = 46.8 bits (109), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 23/42 (54%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           ++  NV++ VE  ++ +    Y AN +TI     +M TT+ +
Sbjct: 400 LEESNVDLTVELVNLIKAQSNYQANAKTISTQSTIMQTTIQM 441


>gi|94263288|ref|ZP_01287104.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
 gi|94267693|ref|ZP_01290962.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
 gi|94272297|ref|ZP_01292100.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
 gi|93450173|gb|EAT01484.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
 gi|93451895|gb|EAT02626.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
 gi|93456371|gb|EAT06495.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
          Length = 243

 Score = 46.8 bits (109), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 12/49 (24%), Positives = 19/49 (38%)

Query: 82  PVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
                 G V+  NVN + E   M +  R Y A  + I+   +M    + 
Sbjct: 189 DFQVRQGYVEKSNVNSIEEMTAMIDLYRNYEAQQKMIQGIDEMDDLAIS 237



 Score = 34.5 bits (77), Expect = 5.4,   Method: Composition-based stats.
 Identities = 12/77 (15%), Positives = 23/77 (29%)

Query: 15 LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFV 74
          +  Q  R+  ++ N+AN  T G    +  +     +        G          Q    
Sbjct: 16 MLGQERRLDQVANNLANVDTAGYKRQNTAFWEMLYNVTADRQRIGKGSHTLTDHQQGNVQ 75

Query: 75 EEFDPGHPVANASGIVK 91
          +  +P     N  G  +
Sbjct: 76 QTDNPLDLAINGEGFFR 92


>gi|320354350|ref|YP_004195689.1| flagellar hook-associated protein FlgK [Desulfobulbus propionicus
           DSM 2032]
 gi|320122852|gb|ADW18398.1| flagellar hook-associated protein FlgK [Desulfobulbus propionicus
           DSM 2032]
          Length = 465

 Score = 46.8 bits (109), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 13/88 (14%), Positives = 31/88 (35%), Gaps = 2/88 (2%)

Query: 47  KTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVK--YPNVNVLVETADM 104
           K  +  +         V  +G++ +            A     ++  Y  V++  E  D+
Sbjct: 377 KVGTTNDTFDNFFSQMVATVGIEAARNDLALQGAQDAAVQLQNLRDGYSGVSLEEEMIDL 436

Query: 105 RETNRLYMANLQTIKQSHDMMTTTLDLL 132
            +  R + ++ + +    +MM   L L 
Sbjct: 437 IQYQRGFESSAKFLATVDEMMNALLQLK 464



 Score = 38.7 bits (88), Expect = 0.28,   Method: Composition-based stats.
 Identities = 16/80 (20%), Positives = 27/80 (33%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  L+ + +   + L      ++I+  NIAN  T G +       +             G
Sbjct: 1  MTSLLNALNAGKTSLLTNQKSIEIVGNNIANVNTEGYSRQRAELMQIPAVNFGDFFVGQG 60

Query: 61 VRVKKIGVDQSTFVEEFDPG 80
          V V  +  D S F+      
Sbjct: 61 VTVSNVSRDYSVFINRQLQE 80


>gi|315497293|ref|YP_004086097.1| fagellar hook-basal body protein [Asticcacaulis excentricus CB 48]
 gi|315415305|gb|ADU11946.1| fagellar hook-basal body protein [Asticcacaulis excentricus CB 48]
          Length = 459

 Score = 46.8 bits (109), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 20/44 (45%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++   V++  E   +    R Y A  + I  S +MM T ++  R
Sbjct: 416 LEASTVDLSSEFTSLITIQRAYSAASKIITTSDEMMQTVIESKR 459



 Score = 34.5 bits (77), Expect = 5.8,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 18/45 (40%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR 46
            + ++     S L+  S  +  IS NIAN  TT     S  +  
Sbjct: 1  MSISSAMLSGVSALSANSTALAAISNNIANVNTTAYKSVSTSFAA 45


>gi|11386807|sp|P57422|FLGE_BUCAI RecName: Full=Flagellar hook protein flgE
 gi|25403598|pir||E84969 flagellar hook protein flgE [imported] - Buchnera sp.  (strain APS)
 gi|10039011|dbj|BAB13045.1| flagellar hook protein flgE [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
          Length = 405

 Score = 46.8 bits (109), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 22/42 (52%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           ++  NV++  E  +M    R Y +N Q+ K    ++ T ++L
Sbjct: 363 LEVSNVDLNKELINMIIAQRNYQSNAQSFKTEDKIINTLINL 404


>gi|302134834|ref|ZP_07260824.1| flagellar hook protein FlgE [Pseudomonas syringae pv. tomato NCPPB
           1108]
          Length = 441

 Score = 46.8 bits (109), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 31/77 (40%)

Query: 55  MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
           +  +GG   ++            + G         ++  NV++ +E  ++ +    Y AN
Sbjct: 364 LAQAGGTNWRETFASGVPVSGVPESGTLGYITGQALEESNVDLTMELVNLIKAQSNYQAN 423

Query: 115 LQTIKQSHDMMTTTLDL 131
            +TI     +M TT+ +
Sbjct: 424 AKTISTQSTIMQTTIQM 440


>gi|39936993|ref|NP_949269.1| flagellar hook protein flgE [Rhodopseudomonas palustris CGA009]
 gi|192292821|ref|YP_001993426.1| hypothetical protein Rpal_4455 [Rhodopseudomonas palustris TIE-1]
 gi|39650850|emb|CAE29373.1| probable flagellar hook protein flgE [Rhodopseudomonas palustris
           CGA009]
 gi|192286570|gb|ACF02951.1| protein of unknown function DUF1078 domain protein
           [Rhodopseudomonas palustris TIE-1]
          Length = 598

 Score = 46.8 bits (109), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 21/40 (52%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           N ++  E   +  T + Y AN + I  ++ M+   L+++R
Sbjct: 559 NTDIADEFTKLIVTQQAYSANTKVITTANTMVQDLLNVMR 598


>gi|269836598|ref|YP_003318826.1| hypothetical protein Sthe_0566 [Sphaerobacter thermophilus DSM
           20745]
 gi|269785861|gb|ACZ38004.1| protein of unknown function DUF1078 domain protein [Sphaerobacter
           thermophilus DSM 20745]
          Length = 247

 Score = 46.8 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/98 (13%), Positives = 35/98 (35%), Gaps = 1/98 (1%)

Query: 37  DTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVN 96
              G+           +++       ++ +G ++               + G V+  NV+
Sbjct: 147 TADGTILVNGAPAGQLQLVEFPPDTPIEAVGQNRFAIEGAGQQSETAGVSQGFVEQSNVD 206

Query: 97  VLVETADMRETNRLYMANLQTIKQSHDMMTTTLD-LLR 133
           +     +M E +R Y    + ++ S   + T ++ + R
Sbjct: 207 LAQSMVEMLEASRSYALAQRMLQVSDATLGTAVNEIGR 244


>gi|78067837|ref|YP_370606.1| flagellar hook protein FlgE [Burkholderia sp. 383]
 gi|77968582|gb|ABB09962.1| conserved hypothetical protein [Burkholderia sp. 383]
          Length = 413

 Score = 46.8 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/83 (16%), Positives = 30/83 (36%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +    +   GG +  +        +      +        ++  NV++  +  ++    
Sbjct: 331 FNNPNGLVNLGGNQYAESAASGVPQISAPGSTNHGKLQGSALENSNVDLTSQLVNLITAQ 390

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y AN QTIK    +  T ++L
Sbjct: 391 RNYQANAQTIKTQQAVDQTIINL 413


>gi|52841451|ref|YP_095250.1| flagellar hook protein FlgE [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|52628562|gb|AAU27303.1| flagellar hook protein FlgE [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
          Length = 437

 Score = 46.8 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/83 (18%), Positives = 30/83 (36%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +  E +   G     +        +     G      SG ++  NV++  E   +    
Sbjct: 354 FADPESLQNIGNTSWAETTASGQPLISAPGSGGLGLINSGRLEESNVDLTGELVKLINAQ 413

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R + AN QTI+    +  T +++
Sbjct: 414 RNFQANAQTIRTGDAITQTIINI 436


>gi|330975976|gb|EGH76042.1| flagellar hook protein FlgE [Pseudomonas syringae pv. aptata str.
           DSM 50252]
          Length = 442

 Score = 46.8 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/119 (18%), Positives = 44/119 (36%), Gaps = 6/119 (5%)

Query: 13  SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQST 72
           SG+ V S      S N+    T G +         + +  + +  +GG   ++       
Sbjct: 329 SGMNVDS------SGNLFATYTNGKSQVIGQTSLTSFANVQGLAQAGGTNWRETFASGVP 382

Query: 73  FVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
                  G         ++  NV++ +E  ++ +    Y AN +TI     +M TT+ +
Sbjct: 383 VSGAPQSGTLGYITGQALEESNVDLTMELVNLIKAQSNYQANAKTISTQSTIMQTTIQM 441


>gi|220905263|ref|YP_002480575.1| flagellar hook-associated protein FlgK [Desulfovibrio desulfuricans
           subsp. desulfuricans str. ATCC 27774]
 gi|219869562|gb|ACL49897.1| flagellar hook-associated protein FlgK [Desulfovibrio desulfuricans
           subsp. desulfuricans str. ATCC 27774]
          Length = 715

 Score = 46.8 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/134 (15%), Positives = 37/134 (27%), Gaps = 19/134 (14%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKT--------ISFEEVMHGSGGV 61
           IA   +  Q         N AN               K             + +      
Sbjct: 591 IAAGAVNGQ---------NQANKGDNVTATAIGELASKKVTVSTTWKTVSNQSIGEYYAT 641

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYP--NVNVLVETADMRETNRLYMANLQTIK 119
            V  +G D+       +    +A            VN+  E +++ +    Y A  + I 
Sbjct: 642 LVTTVGADKRLAKTNAEYHKALATDLEDRVTSVTGVNLDEEMSNLIKFQHSYTAAAKLIT 701

Query: 120 QSHDMMTTTLDLLR 133
            +  M+ T L L +
Sbjct: 702 TADQMLQTLLGLKQ 715



 Score = 34.5 bits (77), Expect = 5.2,   Method: Composition-based stats.
 Identities = 10/31 (32%), Positives = 15/31 (48%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDT 38
           +I  + L    A + +   NIANA T G +
Sbjct: 6  LNIGKTALGASQAWISVTGSNIANADTEGYS 36


>gi|28869140|ref|NP_791759.1| flagellar hook protein FlgE [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|213967582|ref|ZP_03395730.1| flagellar hook protein FlgE [Pseudomonas syringae pv. tomato T1]
 gi|301385713|ref|ZP_07234131.1| flagellar hook protein FlgE [Pseudomonas syringae pv. tomato Max13]
 gi|302060075|ref|ZP_07251616.1| flagellar hook protein FlgE [Pseudomonas syringae pv. tomato K40]
 gi|28852380|gb|AAO55454.1| flagellar hook protein FlgE [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|213927883|gb|EEB61430.1| flagellar hook protein FlgE [Pseudomonas syringae pv. tomato T1]
 gi|331017026|gb|EGH97082.1| flagellar hook protein FlgE [Pseudomonas syringae pv. lachrymans
           str. M302278PT]
          Length = 441

 Score = 46.8 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 31/77 (40%)

Query: 55  MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
           +  +GG   ++            + G         ++  NV++ +E  ++ +    Y AN
Sbjct: 364 LAQAGGTNWRETFASGVPVSGVPESGTLGYITGQALEESNVDLTMELVNLIKAQSNYQAN 423

Query: 115 LQTIKQSHDMMTTTLDL 131
            +TI     +M TT+ +
Sbjct: 424 AKTISTQSTIMQTTIQM 440


>gi|241761151|ref|ZP_04759240.1| protein of unknown function DUF1078 domain protein [Zymomonas
           mobilis subsp. mobilis ATCC 10988]
 gi|241374770|gb|EER64231.1| protein of unknown function DUF1078 domain protein [Zymomonas
           mobilis subsp. mobilis ATCC 10988]
          Length = 418

 Score = 46.8 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 27/57 (47%)

Query: 75  EEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            E D     +  SG ++  N+++  E  ++    R + AN + I   + M++  +++
Sbjct: 360 READTSGLGSVQSGALELSNIDLTQELVNLISEQRNFQANSKAISTDNQMVSYVMNI 416


>gi|332140547|ref|YP_004426285.1| flagellar basal-body rod protein FlgF [Alteromonas macleodii str.
           'Deep ecotype']
 gi|327550569|gb|AEA97287.1| flagellar basal-body rod protein FlgF [Alteromonas macleodii str.
           'Deep ecotype']
          Length = 247

 Score = 46.8 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 25/48 (52%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            SG+++  NVN + E  DM    R Y   ++ +KQ+  +  +   LLR
Sbjct: 198 MSGMLEGSNVNAVDEMVDMISLQRHYELQVKMMKQAEKLDQSGNALLR 245


>gi|255263716|ref|ZP_05343058.1| flagellar hook-associated protein FlgK [Thalassiobium sp. R2A62]
 gi|255106051|gb|EET48725.1| flagellar hook-associated protein FlgK [Thalassiobium sp. R2A62]
          Length = 479

 Score = 46.8 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 18/39 (46%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
            V+   E  ++    + Y AN + I+   +MM T L L 
Sbjct: 440 GVDTDQEMQNLLLIEQAYSANAKVIQTVDEMMQTLLRLG 478



 Score = 34.5 bits (77), Expect = 5.5,   Method: Composition-based stats.
 Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 7/63 (11%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            + +S   A SGL   S   +I+S N+AN+ T G       Y R+ +     + G  G 
Sbjct: 1  MSISSSLSNALSGLTAASRAAEIVSSNLANSLTDG-------YARRRLDLSSQLTGGVGG 53

Query: 62 RVK 64
           V+
Sbjct: 54 GVQ 56


>gi|113969606|ref|YP_733399.1| flagellar hook protein FlgE [Shewanella sp. MR-4]
 gi|113884290|gb|ABI38342.1| flagellar basal body FlaE domain protein [Shewanella sp. MR-4]
          Length = 453

 Score = 46.8 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/103 (17%), Positives = 40/103 (38%)

Query: 29  IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASG 88
           I  + + G T           + E+ +   G    K           E + G   + +S 
Sbjct: 350 ITASYSNGSTVPLSRVALVRFANEQGLTQVGNTSWKASLESGPALAGEPNSGTFGSISSS 409

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            ++  N+++  E  D+    R + AN +T++ ++ +  T L +
Sbjct: 410 ALEQSNIDLTTELVDLISAQRNFQANSRTLEVNNTLQQTVLQI 452



 Score = 41.4 bits (95), Expect = 0.042,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 18/39 (46%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          S +IA SG++     +   + NIANA T G       + 
Sbjct: 2  SFNIALSGISAAQKDLNTTANNIANANTIGFKESRAEFA 40


>gi|114046838|ref|YP_737388.1| flagellar hook protein FlgE [Shewanella sp. MR-7]
 gi|113888280|gb|ABI42331.1| flagellar basal body FlaE domain protein [Shewanella sp. MR-7]
          Length = 453

 Score = 46.8 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/103 (17%), Positives = 40/103 (38%)

Query: 29  IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASG 88
           I  + + G T           + E+ +   G    K           E + G   + +S 
Sbjct: 350 ITASYSNGSTVPLSRVALVRFANEQGLTQVGNTSWKASLESGPALAGEPNSGTFGSISSS 409

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            ++  N+++  E  D+    R + AN +T++ ++ +  T L +
Sbjct: 410 ALEQSNIDLTTELVDLISAQRNFQANSRTLEVNNTLQQTVLQI 452



 Score = 41.4 bits (95), Expect = 0.043,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 18/39 (46%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          S +IA SG++     +   + NIANA T G       + 
Sbjct: 2  SFNIALSGISAAQKDLNTTANNIANANTIGFKESRAEFA 40


>gi|118588735|ref|ZP_01546143.1| hypothetical protein SIAM614_18554 [Stappia aggregata IAM 12614]
 gi|118438721|gb|EAV45354.1| hypothetical protein SIAM614_18554 [Stappia aggregata IAM 12614]
          Length = 463

 Score = 46.8 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 24/44 (54%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           V+  N ++  E + +  T + Y AN + +  + +M+   L+++R
Sbjct: 420 VELSNADIADEFSKLIITQQAYSANSRIVTSADEMLDDALNMVR 463



 Score = 34.8 bits (78), Expect = 4.1,   Method: Composition-based stats.
 Identities = 19/65 (29%), Positives = 37/65 (56%), Gaps = 7/65 (10%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            +  + + A SGLA Q+  ++ IS N+AN++TTG       Y+R   +F +++ G G  
Sbjct: 1  MGIYGAINSAVSGLAAQAKALENISGNVANSQTTG-------YKRLDTTFSDLVSGGGSK 53

Query: 62 RVKKI 66
          + +++
Sbjct: 54 QAQQV 58


>gi|269103190|ref|ZP_06155887.1| flagellar hook protein FlgE [Photobacterium damselae subsp.
           damselae CIP 102761]
 gi|268163088|gb|EEZ41584.1| flagellar hook protein FlgE [Photobacterium damselae subsp.
           damselae CIP 102761]
          Length = 449

 Score = 46.8 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/104 (15%), Positives = 38/104 (36%)

Query: 28  NIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANAS 87
           N+  + + G            +S E+ +   GG               +   G   A  S
Sbjct: 345 NVLASYSNGKDRIVGRVAMARVSNEQGLSQLGGTLWNVTQESGDAVWGDASQGSFGAIKS 404

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           G ++  N+++  E  D+    R + A+ + ++ ++ +    L +
Sbjct: 405 GTLEQSNIDMTQELVDLITAQRNFQASSRALEVNNQLQQNILQI 448



 Score = 39.9 bits (91), Expect = 0.13,   Method: Composition-based stats.
 Identities = 14/38 (36%), Positives = 17/38 (44%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          S +IA SGL      +   S NIANA T G       +
Sbjct: 2  SVNIALSGLGAAQKDLNTTSNNIANANTYGFKESRAEF 39


>gi|153954739|ref|YP_001395504.1| hypothetical protein CKL_2121 [Clostridium kluyveri DSM 555]
 gi|219855203|ref|YP_002472325.1| hypothetical protein CKR_1860 [Clostridium kluyveri NBRC 12016]
 gi|146347597|gb|EDK34133.1| FlgK [Clostridium kluyveri DSM 555]
 gi|219568927|dbj|BAH06911.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 632

 Score = 46.8 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/127 (14%), Positives = 48/127 (37%), Gaps = 2/127 (1%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
            +ANS + +QS       E++           ++ Y   +++    +       V K+G+
Sbjct: 505 QLANSLMNIQSVTEDSSREDLIGDIFATKDTLNNVYAVGSVNGGSTLDNYFNNLVNKVGM 564

Query: 69  DQSTFVEEFDPGHPVANASGIVKYP--NVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
            +    ++ D       +    +     V++  E  ++ +    Y AN + I    +++ 
Sbjct: 565 HEEEAKKQVDYEATQLESFTQSRESTSGVSLDEEMTNLIQFQHCYQANAKMISTVDELLD 624

Query: 127 TTLDLLR 133
             ++ L+
Sbjct: 625 VVINGLK 631



 Score = 45.6 bits (106), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/58 (29%), Positives = 24/58 (41%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          M  L +  + A SGL  Q   + + S NIANA T G +         T      M+ +
Sbjct: 1  MPGLFSIFNTAKSGLFAQQTSINVTSHNIANAETEGYSRQRATLVTTTPYTMPSMNAA 58


>gi|187924404|ref|YP_001896046.1| flagellar basal body FlaE domain protein [Burkholderia phytofirmans
           PsJN]
 gi|187715598|gb|ACD16822.1| flagellar basal body FlaE domain protein [Burkholderia phytofirmans
           PsJN]
          Length = 410

 Score = 46.8 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 30/84 (35%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
           T S    +   G     + G   +  V      +      G  +  NV++  +  D+   
Sbjct: 327 TFSNPNGLANMGNNLYAQTGDSGAAQVSSPGSTNHGVLLGGQTEDSNVDLTHQLVDLITA 386

Query: 108 NRLYMANLQTIKQSHDMMTTTLDL 131
            R Y AN QTIK    +    ++L
Sbjct: 387 QRNYQANSQTIKTQQTVDQALINL 410



 Score = 35.6 bits (80), Expect = 2.5,   Method: Composition-based stats.
 Identities = 22/93 (23%), Positives = 32/93 (34%), Gaps = 5/93 (5%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY---RRKTISFEEVMHGSGGVRV 63
          S     SGL+  S  + +I  NIANA T G    +  +       +          G R+
Sbjct: 2  SYQTGLSGLSAASTDLDVIGNNIANANTVGFKSSTAQFADMYANAVMTAANNQVGIGTRL 61

Query: 64 KKIGVD--QSTFVEEFDPGHPVANASGIVKYPN 94
               D    TF +   P     N +G  +  N
Sbjct: 62 STAEQDFSNGTFSKTDRPLDIAINGNGFFQLSN 94


>gi|24374758|ref|NP_718801.1| flagellar hook protein FlgE [Shewanella oneidensis MR-1]
 gi|24349424|gb|AAN56245.1|AE015762_2 flagellar hook protein FlgE [Shewanella oneidensis MR-1]
          Length = 453

 Score = 46.8 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/103 (17%), Positives = 40/103 (38%)

Query: 29  IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASG 88
           I  + + G T           + E+ +   G    K           E + G   + +S 
Sbjct: 350 ITASYSNGSTVPLARVALVRFANEQGLTQVGNTSWKASLSSGPALAGEPNSGTFGSLSSS 409

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            ++  N+++  E  D+    R + AN +T++ ++ +  T L +
Sbjct: 410 ALEQSNIDLTTELVDLISAQRNFQANSRTLEVNNTLQQTVLQI 452



 Score = 41.4 bits (95), Expect = 0.044,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 18/39 (46%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          S +IA SG++     +   + NIANA T G       + 
Sbjct: 2  SFNIALSGISAAQKDLNTTANNIANANTIGFKESRAEFA 40


>gi|330986468|gb|EGH84571.1| flagellar hook protein FlgE [Pseudomonas syringae pv. lachrymans
           str. M301315]
          Length = 441

 Score = 46.8 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 23/42 (54%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           ++  NV++ +E  ++ +    Y AN +TI     +M TT+ +
Sbjct: 399 LEESNVDLTMELVNLIKAQSNYQANAKTISTQSTIMQTTIQM 440


>gi|303248233|ref|ZP_07334496.1| flagellar hook-associated protein FlgK [Desulfovibrio
           fructosovorans JJ]
 gi|302490371|gb|EFL50282.1| flagellar hook-associated protein FlgK [Desulfovibrio
           fructosovorans JJ]
          Length = 696

 Score = 46.8 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/130 (13%), Positives = 44/130 (33%), Gaps = 8/130 (6%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           +   H+   GL          ++++            D +     +  + + G  G  V 
Sbjct: 572 VNVGHVGTDGLTASG--DNTTAKSMTGLADKK----VDFFVTGKATANQTISGYYGAMVG 625

Query: 65  KIGVDQSTFVEEFDPGHPVANA--SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
           ++G D ++   +      +A+      +    V++  E  ++ +    Y A  + I  + 
Sbjct: 626 QVGADTASANYQATYQTALASQIKDQKLSISGVSLDEELTNLIKFQHAYQAAAKLISTAD 685

Query: 123 DMMTTTLDLL 132
            +  T L L 
Sbjct: 686 SLFQTVLGLK 695


>gi|302669847|ref|YP_003829807.1| flagellar hook-associated protein FlgK2 [Butyrivibrio
          proteoclasticus B316]
 gi|302394320|gb|ADL33225.1| flagellar hook-associated protein FlgK2 [Butyrivibrio
          proteoclasticus B316]
          Length = 615

 Score = 46.8 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/69 (26%), Positives = 26/69 (37%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M       +IA SGL   +A +   + NIANA T G +                 +G  G
Sbjct: 1  MTSQFFGLNIAASGLRASNASLNTTANNIANANTDGYSRQKVTQAASNALRVFATYGCAG 60

Query: 61 VRVKKIGVD 69
            V  + +D
Sbjct: 61 AGVDTLAID 69


>gi|126175146|ref|YP_001051295.1| flagellar hook protein FlgE [Shewanella baltica OS155]
 gi|125998351|gb|ABN62426.1| flagellar basal body FlaE domain protein [Shewanella baltica OS155]
          Length = 460

 Score = 46.8 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/103 (17%), Positives = 40/103 (38%)

Query: 29  IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASG 88
           I  + + G T           + E+ +   G    K           E + G   + +S 
Sbjct: 357 ITASYSNGSTVALARVALVRFANEQGLTQVGNTSWKASLASGPALAGEANSGTFGSISSS 416

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            ++  N+++  E  D+    R + AN +T++ ++ +  T L +
Sbjct: 417 ALEQSNIDLTTELVDLISAQRNFQANSRTLEVNNTLQQTVLQI 459



 Score = 40.2 bits (92), Expect = 0.094,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 18/39 (46%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          S +IA SG+A     +   + NIANA T G       + 
Sbjct: 2  SFNIALSGIAAAQKDLNTTANNIANANTIGFKESRAEFA 40


>gi|222100100|ref|YP_002534668.1| Flagellar basal-body rod protein FlgF [Thermotoga neapolitana DSM
           4359]
 gi|221572490|gb|ACM23302.1| Flagellar basal-body rod protein FlgF [Thermotoga neapolitana DSM
           4359]
          Length = 252

 Score = 46.8 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 11/54 (20%), Positives = 20/54 (37%)

Query: 77  FDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             P        G V+  NVN L    DM    R Y  + + +  + ++    ++
Sbjct: 193 PSPTENFRILQGYVEKSNVNALKAMVDMISAMRHYELSQRAVLVNDELNGKLIN 246


>gi|167034944|ref|YP_001670175.1| flagellar hook protein FlgE [Pseudomonas putida GB-1]
 gi|166861432|gb|ABY99839.1| flagellar basal body FlaE domain protein [Pseudomonas putida GB-1]
          Length = 440

 Score = 46.8 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/106 (18%), Positives = 37/106 (34%)

Query: 26  SENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVAN 85
           S N+    T G             +  + +   GG   K+        +   D G     
Sbjct: 334 SGNMFANFTNGQDKVIGQVAIANFANLQGLTPIGGTNWKESYASGVPVIGAPDTGTLGQI 393

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             G ++  NV++  E  ++ +    Y AN +TI     +M T + +
Sbjct: 394 TGGALEDSNVDLTGELVNLIKAQSNYQANAKTISTESTIMQTIIQM 439



 Score = 36.0 bits (81), Expect = 2.0,   Method: Composition-based stats.
 Identities = 19/82 (23%), Positives = 29/82 (35%), Gaps = 2/82 (2%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          S +I  SGL   +  + +   NIAN  TTG       +  +      +   S G      
Sbjct: 2  SFNIGLSGLYAANKALNVTGNNIANVATTGFKSSRAEFADQ--YSNSIRGTSAGKNTVGT 59

Query: 67 GVDQSTFVEEFDPGHPVANASG 88
          GV  +   + F PG+       
Sbjct: 60 GVKTAAVSQLFTPGNINGTGQA 81


>gi|94500242|ref|ZP_01306775.1| flagellar basal-body rod protein FlgF [Oceanobacter sp. RED65]
 gi|94427541|gb|EAT12518.1| flagellar basal-body rod protein FlgF [Oceanobacter sp. RED65]
          Length = 249

 Score = 46.8 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/112 (13%), Positives = 38/112 (33%)

Query: 21  RMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPG 80
           ++QI ++   + +  G+ P       +       +            +  +         
Sbjct: 135 KVQIAADGTVSIQGVGEEPAVIAGIEQIKLVNPDLTQMEKGEDGLFRLRDAEPGAIQPAD 194

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
             V  ASG V+  NV+ +     +   +R Y   ++ +  + +   TT  ++
Sbjct: 195 PTVQVASGYVEGSNVSAVHSLTQIMSLHRQYEMQVKMMSTADENAQTTASIM 246


>gi|71280733|ref|YP_268222.1| flagellar hook protein FlgE [Colwellia psychrerythraea 34H]
 gi|71146473|gb|AAZ26946.1| flagellar hook protein FlgE [Colwellia psychrerythraea 34H]
          Length = 554

 Score = 46.8 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/83 (21%), Positives = 34/83 (40%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            + E+ +  +GG   K+  V       E   G      S  ++  NVN+  E  D+    
Sbjct: 471 FANEQGLSQTGGSNWKESLVSGKALAGEAGSGTFGTINSSALEQSNVNLTTELIDLISAQ 530

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R + AN + ++  + +  T L +
Sbjct: 531 RNFQANSRALEVDNQLNQTILQI 553



 Score = 38.7 bits (88), Expect = 0.24,   Method: Composition-based stats.
 Identities = 13/38 (34%), Positives = 17/38 (44%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          S +IA SGL      + + S NIAN  T G       +
Sbjct: 2  SFNIALSGLNAAQKDLDVSSNNIANVNTVGFKESRAEF 39


>gi|117919772|ref|YP_868964.1| flagellar hook protein FlgE [Shewanella sp. ANA-3]
 gi|117612104|gb|ABK47558.1| GCN5-related N-acetyltransferase [Shewanella sp. ANA-3]
          Length = 453

 Score = 46.8 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/103 (17%), Positives = 40/103 (38%)

Query: 29  IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASG 88
           I  + + G T           + E+ +   G    K           E + G   + +S 
Sbjct: 350 ITASYSNGSTVPLARVALVRFANEQGLTQVGNTSWKASLSSGPALAGEPNSGTFGSLSSS 409

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            ++  N+++  E  D+    R + AN +T++ ++ +  T L +
Sbjct: 410 ALEQSNIDLTTELVDLISAQRNFQANSRTLEVNNTLQQTVLQI 452



 Score = 41.4 bits (95), Expect = 0.045,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 18/39 (46%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          S +IA SG++     +   + NIANA T G       + 
Sbjct: 2  SFNIALSGISAAQKDLNTTANNIANANTIGFKESRAEFA 40


>gi|260752886|ref|YP_003225779.1| hypothetical protein Za10_0647 [Zymomonas mobilis subsp. mobilis
           NCIMB 11163]
 gi|258552249|gb|ACV75195.1| protein of unknown function DUF1078 domain protein [Zymomonas
           mobilis subsp. mobilis NCIMB 11163]
          Length = 417

 Score = 46.8 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 27/57 (47%)

Query: 75  EEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            E D     +  SG ++  N+++  E  ++    R + AN + I   + M++  +++
Sbjct: 359 READTSGLGSVQSGALELSNIDLTQELVNLISEQRNFQANSKAISTDNQMVSYVMNI 415


>gi|261856360|ref|YP_003263643.1| flagellar hook-basal body protein [Halothiobacillus neapolitanus
           c2]
 gi|261836829|gb|ACX96596.1| flagellar hook-basal body protein [Halothiobacillus neapolitanus
           c2]
          Length = 418

 Score = 46.8 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 11/83 (13%), Positives = 29/83 (34%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            S  + +   G     +     +    +   G       G ++  NV++  +  ++    
Sbjct: 335 FSNPQGLKQVGNNSWAESVDSGAPTAGQPGTGTFGLIQGGALEQSNVDLTQQLVNLITAQ 394

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R + AN Q I+       + +++
Sbjct: 395 RNFQANAQAIQTDKTATDSVINI 417



 Score = 36.0 bits (81), Expect = 1.7,   Method: Composition-based stats.
 Identities = 11/36 (30%), Positives = 17/36 (47%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSD 42
          S + + +GL      + + S NIANA +TG      
Sbjct: 2  SFNTSITGLNAAQKDLDVTSNNIANANSTGFKSSRA 37


>gi|188589591|ref|YP_001920169.1| flagellar hook-associated protein FlgK [Clostridium botulinum E3
           str. Alaska E43]
 gi|251779172|ref|ZP_04822092.1| flagellar hook-associated protein FlgK [Clostridium botulinum E1
           str. 'BoNT E Beluga']
 gi|188499872|gb|ACD53008.1| flagellar hook-associated protein FlgK [Clostridium botulinum E3
           str. Alaska E43]
 gi|243083487|gb|EES49377.1| flagellar hook-associated protein FlgK [Clostridium botulinum E1
           str. 'BoNT E Beluga']
          Length = 604

 Score = 46.8 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/126 (10%), Positives = 42/126 (33%), Gaps = 16/126 (12%)

Query: 22  MQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGH 81
           ++ +  N+ N++   +      +    ++F++ ++         I       +       
Sbjct: 481 LRNVKMNLTNSKDIKNRND--FFANTKVNFDDGINMISSAEGSTINAYYKEIINTLGVSA 538

Query: 82  PVANASGI-------------VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
             A+ +               +    V++  E  ++ +    Y AN + I    +++   
Sbjct: 539 ETASRNVTSQTKILKDLEMQRLSVSGVSLDEEMTNLIQFQHAYSANAKVISTVDELLDVV 598

Query: 129 LD-LLR 133
           ++ L R
Sbjct: 599 INGLKR 604



 Score = 44.5 bits (103), Expect = 0.005,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 19/53 (35%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE 53
          M  L  +  +A  GL VQ   +   S NIANA T G +               
Sbjct: 1  MAGLFDTFTVAKRGLNVQQGAINTTSHNIANANTVGFSRQRAVATTTRPFGGM 53


>gi|83719411|ref|YP_440801.1| flagellar hook protein FlgE [Burkholderia thailandensis E264]
 gi|167617585|ref|ZP_02386216.1| flagellar hook protein FlgE [Burkholderia thailandensis Bt4]
 gi|257140548|ref|ZP_05588810.1| flagellar hook protein FlgE [Burkholderia thailandensis E264]
 gi|83653236|gb|ABC37299.1| flagellar hook protein FlgE [Burkholderia thailandensis E264]
          Length = 413

 Score = 46.8 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/83 (15%), Positives = 28/83 (33%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +    +   G  +  +        +      +        ++  NV++  +   +    
Sbjct: 331 FNNPNGLVNVGNNQYVETAASGVPQISAPGSTNHGTLQGSALENSNVDLTSQLVKLITAQ 390

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y AN QTIK    +  T ++L
Sbjct: 391 RNYQANAQTIKTQQTVDQTLINL 413


>gi|281600495|gb|ADA73479.1| Flagellar hook protein FlgE [Shigella flexneri 2002017]
 gi|332761421|gb|EGJ91705.1| flagellar hook protein flgE [Shigella flexneri K-671]
 gi|333019459|gb|EGK38742.1| flagellar hook protein flgE [Shigella flexneri K-304]
          Length = 379

 Score = 46.8 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 26/51 (50%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +     +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 328 NFGTLTNGALEASNVDLSKELVNMIVAQRNYKSNAQTIKTQDQILNTRVNL 378



 Score = 35.2 bits (79), Expect = 3.1,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 4/63 (6%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          +   A SGL   +  + +I  NIAN+ T G   G+  +               GV+V  I
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFA----DMFAGSKVGLGVKVAGI 57

Query: 67 GVD 69
            D
Sbjct: 58 TQD 60


>gi|289627763|ref|ZP_06460717.1| flagellar hook protein FlgE [Pseudomonas syringae pv. aesculi str.
           NCPPB3681]
 gi|289651647|ref|ZP_06482990.1| flagellar hook protein FlgE [Pseudomonas syringae pv. aesculi str.
           2250]
 gi|330866422|gb|EGH01131.1| flagellar hook protein FlgE [Pseudomonas syringae pv. aesculi str.
           0893_23]
          Length = 441

 Score = 46.8 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 23/42 (54%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           ++  NV++ +E  ++ +    Y AN +TI     +M TT+ +
Sbjct: 399 LEESNVDLTMELVNLIKAQSNYQANAKTISTQSTIMQTTIQM 440


>gi|206970889|ref|ZP_03231841.1| flagellar hook protein FlgE [Bacillus cereus AH1134]
 gi|228920464|ref|ZP_04083809.1| Flagellar hook protein flgE [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|229178162|ref|ZP_04305533.1| Flagellar hook protein flgE [Bacillus cereus 172560W]
 gi|206734525|gb|EDZ51695.1| flagellar hook protein FlgE [Bacillus cereus AH1134]
 gi|228605292|gb|EEK62742.1| Flagellar hook protein flgE [Bacillus cereus 172560W]
 gi|228839094|gb|EEM84390.1| Flagellar hook protein flgE [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 407

 Score = 46.8 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 24/43 (55%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV++ VE  D+    R +  N + IK S +++   ++L+R
Sbjct: 365 EGANVDLSVEFVDLMLYQRGFQGNAKVIKVSDEVLNEVVNLIR 407



 Score = 39.1 bits (89), Expect = 0.21,   Method: Composition-based stats.
 Identities = 13/69 (18%), Positives = 30/69 (43%), Gaps = 6/69 (8%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I + + + +G+      + + S NIANA+T G        ++K +  + + + S G + 
Sbjct: 1  MIKALYTSITGMNATQNALSVTSNNIANAQTVG------YKKQKAMFDDLLYNNSIGAKG 54

Query: 64 KKIGVDQST 72
                 + 
Sbjct: 55 DGKYAGTNP 63


>gi|71736953|ref|YP_275563.1| flagellar hook protein FlgE [Pseudomonas syringae pv. phaseolicola
           1448A]
 gi|257484949|ref|ZP_05638990.1| flagellar hook protein FlgE [Pseudomonas syringae pv. tabaci ATCC
           11528]
 gi|71557506|gb|AAZ36717.1| flagellar hook protein FlgE [Pseudomonas syringae pv. phaseolicola
           1448A]
 gi|320325093|gb|EFW81162.1| flagellar hook protein FlgE [Pseudomonas syringae pv. glycinea str.
           B076]
 gi|320329352|gb|EFW85345.1| flagellar hook protein FlgE [Pseudomonas syringae pv. glycinea str.
           race 4]
 gi|331011042|gb|EGH91098.1| flagellar hook protein FlgE [Pseudomonas syringae pv. tabaci ATCC
           11528]
          Length = 441

 Score = 46.8 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 23/42 (54%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           ++  NV++ +E  ++ +    Y AN +TI     +M TT+ +
Sbjct: 399 LEESNVDLTMELVNLIKAQSNYQANAKTISTQSTIMQTTIQM 440


>gi|120598232|ref|YP_962806.1| flagellar hook protein FlgE [Shewanella sp. W3-18-1]
 gi|120558325|gb|ABM24252.1| flagellar basal body FlaE domain protein [Shewanella sp. W3-18-1]
          Length = 453

 Score = 46.8 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/103 (17%), Positives = 40/103 (38%)

Query: 29  IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASG 88
           I  + + G T           + E+ +   G    K           E + G   + +S 
Sbjct: 350 ITASYSNGSTVPLARVALVRFANEQGLTQVGNTSWKASLNSGPALAGEANSGTFGSISSS 409

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            ++  N+++  E  D+    R + AN +T++ ++ +  T L +
Sbjct: 410 ALEQSNIDLTTELVDLISAQRNFQANSRTLEVNNTLQQTVLQI 452



 Score = 41.4 bits (95), Expect = 0.040,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 18/39 (46%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          S +IA SG++     +   + NIANA T G       + 
Sbjct: 2  SFNIALSGISAAQKDLNTTANNIANANTVGFKESRAEFA 40


>gi|330955627|gb|EGH55887.1| flagellar hook protein FlgE [Pseudomonas syringae Cit 7]
          Length = 208

 Score = 46.8 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/119 (18%), Positives = 44/119 (36%), Gaps = 6/119 (5%)

Query: 13  SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQST 72
           SG+ V S      S N+    T G +         + +  + +  +GG   ++       
Sbjct: 95  SGMNVDS------SGNLFATYTNGKSQVIGQTSLTSFANVQGLAQAGGTNWRETFASGVP 148

Query: 73  FVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
                  G         ++  NV++ +E  ++ +    Y AN +TI     +M TT+ +
Sbjct: 149 VSGAPQSGTLGYITGQALEESNVDLTMELVNLIKAQSNYQANAKTISTQSTIMQTTIQM 207


>gi|330501137|ref|YP_004378006.1| flagellar basal body FlaE domain-containing protein [Pseudomonas
           mendocina NK-01]
 gi|328915423|gb|AEB56254.1| flagellar basal body FlaE domain-containing protein [Pseudomonas
           mendocina NK-01]
          Length = 395

 Score = 46.8 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 11/74 (14%), Positives = 27/74 (36%)

Query: 55  MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
           +    G    +     +  +     G   A  +G ++  NV++  +   + E  R Y AN
Sbjct: 318 LKDVSGTAWVETADSGAALIGVPGVGPFGALVAGSLENSNVDLTQQLVGLMEGQRNYQAN 377

Query: 115 LQTIKQSHDMMTTT 128
            + +  + ++    
Sbjct: 378 TKVLTTNKELTQVL 391



 Score = 37.5 bits (85), Expect = 0.57,   Method: Composition-based stats.
 Identities = 15/38 (39%), Positives = 22/38 (57%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          S +IA +GL+  + ++  IS NIANA TTG       +
Sbjct: 2  SFNIAMTGLSAVNEQLNTISHNIANAGTTGFKSSRTEF 39


>gi|163785037|ref|ZP_02179764.1| flagellar hook-associated protein [Hydrogenivirga sp. 128-5-R1-1]
 gi|159879693|gb|EDP73470.1| flagellar hook-associated protein [Hydrogenivirga sp. 128-5-R1-1]
          Length = 166

 Score = 46.8 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 22/43 (51%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +   VNV  E  ++ +  R Y +  + I  + +++ T L L++
Sbjct: 124 EKSGVNVDEELVNLMKYQRAYQSAAKIINVTDELLQTILGLVK 166


>gi|28952050|ref|NP_240159.2| flagellar hook protein FlgE [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|219681699|ref|YP_002468085.1| flagellar hook protein FlgE [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
 gi|257471395|ref|ZP_05635394.1| flagellar hook protein FlgE [Buchnera aphidicola str. LSR1
           (Acyrthosiphon pisum)]
 gi|219624542|gb|ACL30697.1| flagellar hook protein FlgE [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
 gi|311086078|gb|ADP66160.1| flagellar hook protein FlgE [Buchnera aphidicola str. LL01
           (Acyrthosiphon pisum)]
 gi|311086649|gb|ADP66730.1| flagellar hook protein FlgE [Buchnera aphidicola str. TLW03
           (Acyrthosiphon pisum)]
 gi|311087235|gb|ADP67315.1| flagellar hook protein FlgE [Buchnera aphidicola str. JF99
           (Acyrthosiphon pisum)]
 gi|311087754|gb|ADP67833.1| flagellar hook protein FlgE [Buchnera aphidicola str. JF98
           (Acyrthosiphon pisum)]
          Length = 408

 Score = 46.8 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 22/42 (52%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           ++  NV++  E  +M    R Y +N Q+ K    ++ T ++L
Sbjct: 366 LEVSNVDLNKELINMIIAQRNYQSNAQSFKTEDKIINTLINL 407


>gi|146293689|ref|YP_001184113.1| flagellar basal body rod protein FlgF [Shewanella putrefaciens
           CN-32]
 gi|145565379|gb|ABP76314.1| flagellar basal-body rod protein FlgF [Shewanella putrefaciens
           CN-32]
 gi|319427088|gb|ADV55162.1| flagellar basal-body rod protein FlgF [Shewanella putrefaciens 200]
          Length = 247

 Score = 46.8 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 25/50 (50%)

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           A  SG V+  NVN + E   + E  R +   ++ +K + ++   +  L+R
Sbjct: 196 AVESGAVEGSNVNPVDEMVSLIELQRQFEMQVKMMKTAEEIDRASSSLMR 245


>gi|329402361|gb|AEB91479.1| hook-associated protein 1 [Helicobacter pylori SS1]
          Length = 606

 Score = 46.8 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/119 (17%), Positives = 35/119 (29%), Gaps = 4/119 (3%)

Query: 19  SARMQIISEN--IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEE 76
              +  I+ N  +AN          D Y  K       +         KI  D       
Sbjct: 488 RPWLAPINGNFDVANMMQQLQYDSVDFYNDKFDIKPMKISEFYQFLTGKINTDAEKSGRI 547

Query: 77  FDPGHPV--ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            D    +        +    V+V  E  ++ +    Y AN + I     M+ T L + +
Sbjct: 548 LDTKKSMLETIKKEQLSISQVSVDEEMLNLIKFQSGYAANAKVITAIDRMIDTFLGIKQ 606



 Score = 44.9 bits (104), Expect = 0.004,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 40/111 (36%), Gaps = 9/111 (8%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M  +++S + + +GL    + + +   NI+NA         + Y R+ +  +       G
Sbjct: 1   MGGILSSLNTSYTGLQAHQSMVDVTGNNISNASD-------EFYSRQRVIAKPQAAYMYG 53

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
            +   +GVD        D            +  N     E + ++E +  +
Sbjct: 54  TKNVNMGVDVEAIERVHDEFVFARYTKANYE--NTYYDTEFSHLKEASAYF 102


>gi|298487857|ref|ZP_07005897.1| Flagellar hook protein flgE [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
 gi|298157582|gb|EFH98662.1| Flagellar hook protein flgE [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
          Length = 441

 Score = 46.8 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 23/42 (54%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           ++  NV++ +E  ++ +    Y AN +TI     +M TT+ +
Sbjct: 399 LEESNVDLTMELVNLIKAQSNYQANAKTISTQSTIMQTTIQM 440


>gi|289679025|ref|ZP_06499915.1| flagellar hook protein FlgE [Pseudomonas syringae pv. syringae FF5]
          Length = 137

 Score = 46.8 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 17/41 (41%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           ++  NV +  E   + +    Y AN + I     +M T + 
Sbjct: 95  LEGSNVVLADELIALIQAQTAYQANSKAISTEVTLMQTLIQ 135


>gi|110805093|ref|YP_688613.1| flagellar hook protein FlgE [Shigella flexneri 5 str. 8401]
 gi|110614641|gb|ABF03308.1| flagellar hook protein FlgE [Shigella flexneri 5 str. 8401]
          Length = 402

 Score = 46.8 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 26/51 (50%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +     +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 351 NFGTLTNGALEASNVDLSKELVNMIVAQRNYKSNAQTIKTQDQILNTRVNL 401



 Score = 35.2 bits (79), Expect = 3.3,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 4/63 (6%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          +   A SGL   +  + +I  NIAN+ T G   G+  +               GV+V  I
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFA----DMFAGSKVGLGVKVAGI 57

Query: 67 GVD 69
            D
Sbjct: 58 TQD 60


>gi|85712255|ref|ZP_01043306.1| Flagella basal body rod protein [Idiomarina baltica OS145]
 gi|85693882|gb|EAQ31829.1| Flagella basal body rod protein [Idiomarina baltica OS145]
          Length = 247

 Score = 46.8 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 21/44 (47%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  NVN + E   M    R Y  N++ +K + +    +  L+R
Sbjct: 202 LEGSNVNAIGEMTSMIALQRQYEMNVKMMKTADENAQRSATLMR 245


>gi|229069305|ref|ZP_04202595.1| Flagellar hook protein flgE [Bacillus cereus F65185]
 gi|229078936|ref|ZP_04211488.1| Flagellar hook protein flgE [Bacillus cereus Rock4-2]
 gi|228704350|gb|EEL56784.1| Flagellar hook protein flgE [Bacillus cereus Rock4-2]
 gi|228713792|gb|EEL65677.1| Flagellar hook protein flgE [Bacillus cereus F65185]
          Length = 407

 Score = 46.8 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 24/43 (55%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV++ VE  D+    R +  N + IK S +++   ++L+R
Sbjct: 365 EGANVDLSVEFVDLMLYQRGFQGNAKVIKVSDEVLNEVVNLIR 407



 Score = 39.1 bits (89), Expect = 0.22,   Method: Composition-based stats.
 Identities = 13/69 (18%), Positives = 30/69 (43%), Gaps = 6/69 (8%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I + + + +G+      + + S NIANA+T G        ++K +  + + + S G + 
Sbjct: 1  MIKALYTSITGMNATQNALSVTSNNIANAQTVG------YKKQKAMFDDLLYNNSIGAKG 54

Query: 64 KKIGVDQST 72
                 + 
Sbjct: 55 DGKYAGTNP 63


>gi|218235227|ref|YP_002366439.1| flagellar hook protein FlgE [Bacillus cereus B4264]
 gi|228907387|ref|ZP_04071245.1| Flagellar hook protein flgE [Bacillus thuringiensis IBL 200]
 gi|228938867|ref|ZP_04101467.1| Flagellar hook protein flgE [Bacillus thuringiensis serovar
           berliner ATCC 10792]
 gi|228964737|ref|ZP_04125844.1| Flagellar hook protein flgE [Bacillus thuringiensis serovar sotto
           str. T04001]
 gi|228971748|ref|ZP_04132369.1| Flagellar hook protein flgE [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228978357|ref|ZP_04138734.1| Flagellar hook protein flgE [Bacillus thuringiensis Bt407]
 gi|218163184|gb|ACK63176.1| flagellar hook protein [Bacillus cereus B4264]
 gi|228781374|gb|EEM29575.1| Flagellar hook protein flgE [Bacillus thuringiensis Bt407]
 gi|228787838|gb|EEM35796.1| Flagellar hook protein flgE [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228794987|gb|EEM42486.1| Flagellar hook protein flgE [Bacillus thuringiensis serovar sotto
           str. T04001]
 gi|228820716|gb|EEM66741.1| Flagellar hook protein flgE [Bacillus thuringiensis serovar
           berliner ATCC 10792]
 gi|228852248|gb|EEM97044.1| Flagellar hook protein flgE [Bacillus thuringiensis IBL 200]
 gi|326939367|gb|AEA15263.1| flagellar hook protein FlgE [Bacillus thuringiensis serovar
           chinensis CT-43]
          Length = 407

 Score = 46.4 bits (108), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 24/43 (55%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV++ VE  D+    R +  N + IK S +++   ++L+R
Sbjct: 365 EGANVDLSVEFVDLMLYQRGFQGNAKVIKVSDEVLNEVVNLIR 407



 Score = 39.1 bits (89), Expect = 0.22,   Method: Composition-based stats.
 Identities = 13/69 (18%), Positives = 30/69 (43%), Gaps = 6/69 (8%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I + + + +G+      + + S NIANA+T G        ++K +  + + + S G + 
Sbjct: 1  MIKALYTSITGMNATQNALSVTSNNIANAQTVG------YKKQKAMFDDLLYNNSIGAKG 54

Query: 64 KKIGVDQST 72
                 + 
Sbjct: 55 DGKYAGTNP 63


>gi|91792665|ref|YP_562316.1| flagellar basal body rod protein FlgF [Shewanella denitrificans
           OS217]
 gi|91714667|gb|ABE54593.1| Flagellar basal-body rod FlgF [Shewanella denitrificans OS217]
          Length = 247

 Score = 46.4 bits (108), Expect = 0.001,   Method: Composition-based stats.
 Identities = 11/50 (22%), Positives = 22/50 (44%)

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
              SG ++  NVN + E   +    R Y   ++ +K + +    +  L+R
Sbjct: 196 QVESGAIEASNVNPVEEMVALISIQRQYEMQVKMMKTAEETDQASSSLMR 245


>gi|146293690|ref|YP_001184114.1| flagellar hook protein FlgE [Shewanella putrefaciens CN-32]
 gi|145565380|gb|ABP76315.1| flagellar basal body FlaE domain protein [Shewanella putrefaciens
           CN-32]
 gi|319427089|gb|ADV55163.1| flagellar hook-basal body protein [Shewanella putrefaciens 200]
          Length = 453

 Score = 46.4 bits (108), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/103 (17%), Positives = 40/103 (38%)

Query: 29  IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASG 88
           I  + + G T           + E+ +   G    K           E + G   + +S 
Sbjct: 350 ITASYSNGSTVPLARVALVRFANEQGLTQVGNTSWKASLNSGPALAGEANSGTFGSLSSS 409

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            ++  N+++  E  D+    R + AN +T++ ++ +  T L +
Sbjct: 410 ALEQSNIDLTTELVDLISAQRNFQANSRTLEVNNTLQQTVLQI 452



 Score = 41.4 bits (95), Expect = 0.039,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 18/39 (46%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          S +IA SG++     +   + NIANA T G       + 
Sbjct: 2  SFNIALSGISAAQKDLNTTANNIANANTIGFKESRAEFA 40


>gi|315649858|ref|ZP_07902941.1| fagellar hook-basal body protein [Paenibacillus vortex V453]
 gi|315274832|gb|EFU38213.1| fagellar hook-basal body protein [Paenibacillus vortex V453]
          Length = 274

 Score = 46.4 bits (108), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 25/73 (34%), Gaps = 2/73 (2%)

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
           G    +    D +       P    +  SG V+  NVN+  E   M E  R Y    + +
Sbjct: 202 GEGLTEGDVFDLTPPAPGEPPKS--SVLSGFVEQSNVNLTDEMTKMMEVQRAYQLMARAL 259

Query: 119 KQSHDMMTTTLDL 131
             S  MM     +
Sbjct: 260 SSSDTMMNLANTM 272



 Score = 35.2 bits (79), Expect = 2.9,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 30/70 (42%), Gaps = 7/70 (10%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +  S   A   +     R+ +I++N+AN  T G       Y++K  SF++V+    G   
Sbjct: 1  MNNSMISAMVSMNALQQRLDVIADNMANVNTAG-------YKKKEASFDDVLTQVQGHHK 53

Query: 64 KKIGVDQSTF 73
                +ST 
Sbjct: 54 DFDRTGRSTP 63


>gi|170742312|ref|YP_001770967.1| flagellar basal body FlaE domain-containing protein
           [Methylobacterium sp. 4-46]
 gi|168196586|gb|ACA18533.1| flagellar basal body FlaE domain protein [Methylobacterium sp.
           4-46]
          Length = 456

 Score = 46.4 bits (108), Expect = 0.001,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 24/46 (52%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G V+  N +   E + +  T + Y AN + +  +  MM+  ++++R
Sbjct: 411 GNVEQSNTDTANEFSKLIITQQAYSANTRVMSTAQQMMSDLVNIIR 456



 Score = 41.0 bits (94), Expect = 0.050,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 25/64 (39%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            + ++   A SGL  Q+  +  IS NIANA+TTG       +             SG V
Sbjct: 1  MDVFSAMQTAVSGLQAQAFSLNNISGNIANAQTTGYRRIDTTFADLLAEQPNDRQTSGSV 60

Query: 62 RVKK 65
              
Sbjct: 61 AASS 64


>gi|284041496|ref|YP_003391836.1| flagellar hook-basal body protein [Conexibacter woesei DSM 14684]
 gi|283945717|gb|ADB48461.1| flagellar hook-basal body protein [Conexibacter woesei DSM 14684]
          Length = 245

 Score = 46.4 bits (108), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/102 (13%), Positives = 27/102 (26%)

Query: 32  ARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVK 91
               G    +D  +   I    V    G   +       +         +      G ++
Sbjct: 144 IGADGTVRVNDGQQIGRIQLVTVTSPDGLRALGDNRFAVTPESGAATATNGATLRQGTLE 203

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             NV++     DM    R +    + I     M+     + R
Sbjct: 204 GSNVDMSDAMVDMMNAQRAFQLASRAIHMQDQMLEVANQVKR 245


>gi|149675698|dbj|BAF64728.1| flagellar hook protein [Shewanella livingstonensis]
          Length = 459

 Score = 46.4 bits (108), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/103 (18%), Positives = 40/103 (38%)

Query: 29  IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASG 88
           I  + + G T           + E+ +   G    K      +    E + G   +  S 
Sbjct: 356 ITASYSNGSTVPLSRVALVRFANEQGLTQVGNTSWKASLDSGAALAGEANSGTFGSIRSS 415

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            ++  NV++  E  D+    R + AN +T++ ++ +  T L +
Sbjct: 416 ALEQSNVDLTTELVDLISAQRNFQANSRTLEVNNTLNQTILQI 458



 Score = 39.1 bits (89), Expect = 0.22,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 17/39 (43%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          S +IA SG+A     +   + NIAN  T G       + 
Sbjct: 2  SLNIALSGIAAAQKDLNTTANNIANVNTIGFKESRAEFA 40


>gi|225871934|ref|YP_002753388.1| flagellar hook protein flgE [Acidobacterium capsulatum ATCC 51196]
 gi|225793054|gb|ACO33144.1| flagellar hook protein flgE [Acidobacterium capsulatum ATCC 51196]
          Length = 409

 Score = 46.4 bits (108), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/98 (14%), Positives = 34/98 (34%)

Query: 34  TTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
           + G T         +I+ E+ +   GG   +      S  +               ++  
Sbjct: 310 SNGQTQAVGQLALASITNEQGLQLDGGNLYQTTLASGSASIGLAGSAGLGTVQDSALEGS 369

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           NVN+  E +++      Y A+ + +     +   T+++
Sbjct: 370 NVNISTEFSNLVVAQNAYEASSKALTTFDQVAQDTINI 407



 Score = 34.5 bits (77), Expect = 4.5,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 18/40 (45%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          ++S  I  +GL   S  +  I+ N++N  TT        +
Sbjct: 1  MSSFSIPLTGLEASSTSLDTIANNLSNMNTTAFKSQQASF 40


>gi|239815263|ref|YP_002944173.1| hypothetical protein Vapar_2278 [Variovorax paradoxus S110]
 gi|239801840|gb|ACS18907.1| protein of unknown function DUF1078 domain protein [Variovorax
           paradoxus S110]
          Length = 395

 Score = 46.4 bits (108), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 22/43 (51%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           V+  NV++  E +D+    R Y A+ Q I  ++DM+     + 
Sbjct: 351 VEISNVDLSQEFSDLVIMQRGYQASSQIISTANDMLQELFSMK 393


>gi|254457451|ref|ZP_05070879.1| flagellar hook-associated protein FlgK [Campylobacterales bacterium
           GD 1]
 gi|207086243|gb|EDZ63527.1| flagellar hook-associated protein FlgK [Campylobacterales bacterium
           GD 1]
          Length = 626

 Score = 46.4 bits (108), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/112 (12%), Positives = 31/112 (27%), Gaps = 2/112 (1%)

Query: 24  IISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQST--FVEEFDPGH 81
           +  +N+              +      F    +    +   ++G   +      E     
Sbjct: 515 VAGDNVVALNMVQHQYEKFDFYVGNQDFNTTTYAMFDIIATEVGTQTNAAILKNETITTQ 574

Query: 82  PVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             A          V++  E  ++ +    Y A  + I     MM T L + +
Sbjct: 575 YNATELEYNSVSKVSLDEEMTNLIKYQTSYGAAAKIITTIDQMMQTLLGIKQ 626



 Score = 40.2 bits (92), Expect = 0.095,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 25/74 (33%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  +  + HI  SGL V    +     NI+NA   G T         T       +   G
Sbjct: 1  MASIFNALHIGYSGLNVAQIGINTTGHNISNAEVDGYTRQRVITAAATPLQTYPGNVGNG 60

Query: 61 VRVKKIGVDQSTFV 74
           +V  I      FV
Sbjct: 61 AQVMDIKRVFDNFV 74


>gi|66046707|ref|YP_236548.1| flagellar hook protein FlgE [Pseudomonas syringae pv. syringae
           B728a]
 gi|63257414|gb|AAY38510.1| Flagellar basal body rod protein:Protein of unknown function
           DUF1078:Flagellar basal body FlaE [Pseudomonas syringae
           pv. syringae B728a]
          Length = 442

 Score = 46.4 bits (108), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/119 (18%), Positives = 44/119 (36%), Gaps = 6/119 (5%)

Query: 13  SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQST 72
           SG+ V S      S N+    T G +         + +  + +  +GG   ++       
Sbjct: 329 SGMNVDS------SGNLFATYTNGKSQVIGQTSLTSFANVQGLAQAGGTNWRETFASGVP 382

Query: 73  FVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
                  G         ++  NV++ +E  ++ +    Y AN +TI     +M TT+ +
Sbjct: 383 VSGAPQSGTLGYITGQALEESNVDLTMELVNLIKAQSNYQANAKTISTQSTIMQTTIQM 441


>gi|330972413|gb|EGH72479.1| flagellar hook protein FlgE [Pseudomonas syringae pv. aceris str.
           M302273PT]
          Length = 442

 Score = 46.4 bits (108), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/119 (18%), Positives = 44/119 (36%), Gaps = 6/119 (5%)

Query: 13  SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQST 72
           SG+ V S      S N+    T G +         + +  + +  +GG   ++       
Sbjct: 329 SGMNVDS------SGNLFATYTNGKSQVIGQTSLTSFANVQGLAQAGGTNWRETFASGVP 382

Query: 73  FVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
                  G         ++  NV++ +E  ++ +    Y AN +TI     +M TT+ +
Sbjct: 383 VSGAPQSGTLGYITGQALEESNVDLTMELVNLIKAQSNYQANAKTISTQSTIMQTTIQM 441


>gi|229029434|ref|ZP_04185517.1| Flagellar hook protein flgE [Bacillus cereus AH1271]
 gi|228731893|gb|EEL82792.1| Flagellar hook protein flgE [Bacillus cereus AH1271]
          Length = 409

 Score = 46.4 bits (108), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 24/43 (55%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV++ VE  D+    R +  N + IK S +++   ++L+R
Sbjct: 367 EGANVDLSVEFVDLMLYQRGFQGNAKVIKVSDEVLNEVVNLIR 409



 Score = 38.7 bits (88), Expect = 0.29,   Method: Composition-based stats.
 Identities = 13/69 (18%), Positives = 30/69 (43%), Gaps = 6/69 (8%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I + + + +G+      + + S NIANA+T G        ++K +  + + + S G + 
Sbjct: 1  MIKALYTSITGMNATQNALSVTSNNIANAQTVG------YKKQKAMFDDLLYNNSIGSKG 54

Query: 64 KKIGVDQST 72
                 + 
Sbjct: 55 DNKYAGTNP 63


>gi|218896686|ref|YP_002445097.1| flagellar hook protein [Bacillus cereus G9842]
 gi|228900335|ref|ZP_04064565.1| Flagellar hook protein flgE [Bacillus thuringiensis IBL 4222]
 gi|218545583|gb|ACK97977.1| flagellar hook protein [Bacillus cereus G9842]
 gi|228859370|gb|EEN03800.1| Flagellar hook protein flgE [Bacillus thuringiensis IBL 4222]
          Length = 407

 Score = 46.4 bits (108), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 24/43 (55%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV++ VE  D+    R +  N + IK S +++   ++L+R
Sbjct: 365 EGANVDLSVEFVDLMLYQRGFQGNAKVIKVSDEVLNEVVNLIR 407



 Score = 38.7 bits (88), Expect = 0.24,   Method: Composition-based stats.
 Identities = 13/69 (18%), Positives = 30/69 (43%), Gaps = 6/69 (8%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I + + + +G+      + + S NIANA+T G        ++K +  + + + S G + 
Sbjct: 1  MIKALYTSITGMNATQNALSVTSNNIANAQTVG------YKKQKAMFDDLLYNNSIGAKG 54

Query: 64 KKIGVDQST 72
                 + 
Sbjct: 55 DGKYAGTNP 63


>gi|47566136|ref|ZP_00237174.1| flagellar hook protein flgE, putative [Bacillus cereus G9241]
 gi|47557053|gb|EAL15383.1| flagellar hook protein flgE, putative [Bacillus cereus G9241]
          Length = 409

 Score = 46.4 bits (108), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 24/43 (55%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV++ VE  D+    R +  N + IK S +++   ++L+R
Sbjct: 367 EGANVDLSVEFVDLMLYQRGFQGNAKVIKVSDEVLNEVVNLIR 409



 Score = 39.1 bits (89), Expect = 0.23,   Method: Composition-based stats.
 Identities = 13/69 (18%), Positives = 30/69 (43%), Gaps = 6/69 (8%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I + + + +G+      + + S NIANA+T G        ++K +  + + + S G + 
Sbjct: 1  MIKALYTSITGMNATQNALSVTSNNIANAQTVG------YKKQKAMFDDLLYNNSIGAKG 54

Query: 64 KKIGVDQST 72
                 + 
Sbjct: 55 DGNYAGTNP 63


>gi|126668559|ref|ZP_01739513.1| Flagellar basal body rod protein [Marinobacter sp. ELB17]
 gi|126626964|gb|EAZ97607.1| Flagellar basal body rod protein [Marinobacter sp. ELB17]
          Length = 250

 Score = 46.4 bits (108), Expect = 0.001,   Method: Composition-based stats.
 Identities = 9/49 (18%), Positives = 22/49 (44%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
           + G ++  NVN + E     + +R Y   ++ +  + +       LL++
Sbjct: 201 SGGFLESSNVNAVAEMISNLQLSRQYEMQVKVMSTAKENSEAAARLLQN 249


>gi|330889085|gb|EGH21746.1| flagellar hook protein FlgE [Pseudomonas syringae pv. mori str.
           301020]
          Length = 441

 Score = 46.4 bits (108), Expect = 0.001,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 23/42 (54%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           ++  NV++ +E  ++ +    Y AN +TI     +M TT+ +
Sbjct: 399 LEESNVDLTMELVNLIKAQSNYQANAKTISTQSTIMQTTIQM 440


>gi|323697478|ref|ZP_08109390.1| flagellar hook-associated protein FlgK [Desulfovibrio sp. ND132]
 gi|323457410|gb|EGB13275.1| flagellar hook-associated protein FlgK [Desulfovibrio desulfuricans
           ND132]
          Length = 711

 Score = 46.4 bits (108), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 32/85 (37%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
           T S   + + +G V       +++ F + F             +   VN+  E +D+   
Sbjct: 626 TTSQTILDYYNGIVGNVGTDTNRAQFNQNFYQTLANDLNDRQQEVSGVNLDEEMSDLIRY 685

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLL 132
              Y A  + I  + +M+ T L L 
Sbjct: 686 QASYTAAAKLITTADEMLQTILSLK 710


>gi|320325094|gb|EFW81163.1| flagellar hook protein FlgE [Pseudomonas syringae pv. glycinea str.
           B076]
          Length = 586

 Score = 46.4 bits (108), Expect = 0.001,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 17/41 (41%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           ++  NV +  E   + +    Y AN + I     +M T + 
Sbjct: 544 LEGSNVVLADELIALIQAQTAYQANSKAISTEATVMQTLIQ 584



 Score = 33.3 bits (74), Expect = 10.0,   Method: Composition-based stats.
 Identities = 11/36 (30%), Positives = 18/36 (50%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSD 42
          S + A SG+   + R+++   NIAN+ T G      
Sbjct: 2  SFNTAISGIHAANKRLEVAGNNIANSGTIGFKSSRA 37


>gi|307731363|ref|YP_003908587.1| fagellar hook-basal body protein [Burkholderia sp. CCGE1003]
 gi|307585898|gb|ADN59296.1| fagellar hook-basal body protein [Burkholderia sp. CCGE1003]
          Length = 502

 Score = 46.4 bits (108), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/83 (20%), Positives = 31/83 (37%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            S +  +   G    ++        +      +      G V+  NV++  +  D+    
Sbjct: 420 FSNQNGLVNLGNNVFQQTSQSGVAQISAPGSTNHGVLQGGAVENSNVDLTSQLVDLITAQ 479

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y AN QTIK    +  T ++L
Sbjct: 480 RNYQANAQTIKTQQTVDQTLINL 502


>gi|222084885|ref|YP_002543414.1| flagellar hook protein [Agrobacterium radiobacter K84]
 gi|221722333|gb|ACM25489.1| flagellar hook protein [Agrobacterium radiobacter K84]
          Length = 425

 Score = 46.4 bits (108), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 24/48 (50%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            SG ++  NV++  E  +M    + Y AN +  +   D++   ++L R
Sbjct: 378 QSGALEESNVDLATELTNMITAQKSYTANSKVFQAGSDLLDVLVNLQR 425



 Score = 44.5 bits (103), Expect = 0.005,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 29/64 (45%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            +  S   A SG+  Q+ R+  +S+NIAN+ TTG    S  +    +      + SGGV
Sbjct: 1  MSIFGSMKTAISGMNAQANRLATVSDNIANSSTTGYKQASTSFSSLVLPSSSGNYNSGGV 60

Query: 62 RVKK 65
              
Sbjct: 61 ETTV 64


>gi|149375033|ref|ZP_01892806.1| Flagellar basal body rod protein [Marinobacter algicola DG893]
 gi|149360922|gb|EDM49373.1| Flagellar basal body rod protein [Marinobacter algicola DG893]
          Length = 250

 Score = 46.4 bits (108), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/89 (16%), Positives = 31/89 (34%)

Query: 46  RKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
           R  +          GV                 P   +  ASG ++  NVN + E     
Sbjct: 161 RLKLVNPPRDALEKGVDGFIRRKADQALDGPEPPDATMRVASGFLESSNVNAVEEMISNL 220

Query: 106 ETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
           + +R Y   ++ +  +++    +  LL++
Sbjct: 221 QLSRQYEMQVKIMTTANENAEASARLLQN 249


>gi|56460251|ref|YP_155532.1| flagella basal body rod protein [Idiomarina loihiensis L2TR]
 gi|56179261|gb|AAV81983.1| Flagella basal body rod protein [Idiomarina loihiensis L2TR]
          Length = 247

 Score = 46.4 bits (108), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/105 (19%), Positives = 41/105 (39%), Gaps = 1/105 (0%)

Query: 30  ANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK-IGVDQSTFVEEFDPGHPVANASG 88
           AN   +    G+     + I   ++++   G   K   G+ +    ++      V    G
Sbjct: 141 ANGNVSIRPMGAPANAMEVIDRIKLVNPPNGNMEKGNDGLFKLKDDQQAFADANVKLQIG 200

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NVN + E   M    R Y  N++ +K + +    +  L+R
Sbjct: 201 ALEGSNVNSVEEMTHMIALQRQYEMNVKLMKTADENAQRSESLMR 245


>gi|313905151|ref|ZP_07838520.1| fagellar hook-basal body protein [Eubacterium cellulosolvens 6]
 gi|313470054|gb|EFR65387.1| fagellar hook-basal body protein [Eubacterium cellulosolvens 6]
          Length = 247

 Score = 46.4 bits (108), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/100 (14%), Positives = 31/100 (31%), Gaps = 4/100 (4%)

Query: 32  ARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVK 91
           A       G             + +        + G + +       P       +G ++
Sbjct: 151 ADEGRLAEGQQIGIYTVPFPSRLQNVGDDDFRVREGDNNNPITLVELPT----VVTGALE 206

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
               ++  E  +M E  R +  NL+ ++ S ++  T   L
Sbjct: 207 QSGTDIAKEFTNMIEAQRAFSYNLRMVQTSDEVAQTINGL 246


>gi|88858143|ref|ZP_01132785.1| flagellar hook protein [Pseudoalteromonas tunicata D2]
 gi|88819760|gb|EAR29573.1| flagellar hook protein [Pseudoalteromonas tunicata D2]
          Length = 492

 Score = 46.4 bits (108), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/98 (18%), Positives = 34/98 (34%)

Query: 34  TTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
           + GD              E+ +   G                E D G   +  SG ++  
Sbjct: 394 SNGDAQAISKVALARFPNEQGLTQIGNTSWTPSRESGEALAGEPDSGTFGSIRSGTLEQA 453

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           NVN+  E  D+    R + AN + ++ ++ +    L +
Sbjct: 454 NVNLTGELVDLIAAQRNFQANSRALEVNNQISQNILQI 491



 Score = 41.8 bits (96), Expect = 0.034,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 17/39 (43%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          S +IA SGL      + + + NIAN  T G       + 
Sbjct: 2  SFNIALSGLKAAQKDLDVTANNIANVNTYGFKESRAEFA 40


>gi|332759635|gb|EGJ89940.1| flagellar hook protein flgE [Shigella flexneri 2747-71]
 gi|332767683|gb|EGJ97876.1| flagellar hook protein FlgE [Shigella flexneri 2930-71]
          Length = 402

 Score = 46.4 bits (108), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 26/51 (50%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +     +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 351 NFGTLTNGALEASNVDLSKELVNMIVAQRNYKSNAQTIKTQDQILNTRVNL 401



 Score = 34.8 bits (78), Expect = 3.5,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 4/63 (6%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          +   A SGL   +  + +I  NIAN+ T G   G+  +               GV+V  I
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFA----DMFAGSKVGLGVKVAGI 57

Query: 67 GVD 69
            D
Sbjct: 58 TQD 60


>gi|251772436|gb|EES53003.1| probable flagellar hook protein FlgE [Leptospirillum
           ferrodiazotrophum]
          Length = 458

 Score = 46.4 bits (108), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 19/41 (46%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           ++  NV++  +  DM    R Y AN   I   + +M T L 
Sbjct: 415 LEQSNVDLGRQMIDMISAERGYQANASVISADNQLMNTLLT 455



 Score = 38.3 bits (87), Expect = 0.40,   Method: Composition-based stats.
 Identities = 14/44 (31%), Positives = 23/44 (52%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
            +++S ++ANSGL+     M +I  NI+N  T G   G   + 
Sbjct: 1  MGILSSMYVANSGLSAMGTDMSVIGNNISNMNTNGFKAGRAVFA 44


>gi|295400717|ref|ZP_06810694.1| fagellar hook-basal body protein [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|312112591|ref|YP_003990907.1| fagellar hook-basal body protein [Geobacillus sp. Y4.1MC1]
 gi|294977298|gb|EFG52899.1| fagellar hook-basal body protein [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|311217692|gb|ADP76296.1| fagellar hook-basal body protein [Geobacillus sp. Y4.1MC1]
          Length = 274

 Score = 46.4 bits (108), Expect = 0.001,   Method: Composition-based stats.
 Identities = 11/62 (17%), Positives = 23/62 (37%), Gaps = 1/62 (1%)

Query: 73  FVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD-L 131
                +P        G V+  NV++     +M    R + AN + ++     M   ++ +
Sbjct: 211 PSALNNPNVTYTFKQGFVERSNVDLNRAMTEMLSAYRAFEANQKIVQAYDKSMEKAVNEI 270

Query: 132 LR 133
            R
Sbjct: 271 GR 272



 Score = 42.2 bits (97), Expect = 0.027,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 25/55 (45%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++   + A SG+  Q  R+++++ NIANA T G        R     F   +  +
Sbjct: 1  MLRGFYTAASGMMAQQRRVEMLTNNIANANTPGYKADQAALRAFPELFLSRLEET 55


>gi|94495410|ref|ZP_01301990.1| flagellar basal-body rod protein [Sphingomonas sp. SKA58]
 gi|94424798|gb|EAT09819.1| flagellar basal-body rod protein [Sphingomonas sp. SKA58]
          Length = 247

 Score = 46.4 bits (108), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/95 (21%), Positives = 37/95 (38%), Gaps = 1/95 (1%)

Query: 40  GSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVAN-ASGIVKYPNVNVL 98
           G DP   + +   ++++ +G    K              P  P+A   SG ++  NVN  
Sbjct: 150 GGDPANPQQVDKLKLVNAAGSSIAKGNDGLFREVNGGALPSDPLATVTSGSLEGSNVNST 209

Query: 99  VETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
               DM E +R +   ++ I  +  +      L+R
Sbjct: 210 QALIDMIEASRAWETQVKMIDTAKQLDDGGASLMR 244


>gi|281412143|ref|YP_003346222.1| flagellar hook-associated protein FlgK [Thermotoga naphthophila
           RKU-10]
 gi|281373246|gb|ADA66808.1| flagellar hook-associated protein FlgK [Thermotoga naphthophila
           RKU-10]
          Length = 858

 Score = 46.4 bits (108), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/103 (13%), Positives = 35/103 (33%), Gaps = 1/103 (0%)

Query: 30  ANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK-KIGVDQSTFVEEFDPGHPVANASG 88
           AN             +  +   E      GGV  +  +  + ++ ++           + 
Sbjct: 754 ANPELLETIQNLYTRKILSNGKESFYEFFGGVVSELGVEAETASNLKNNTEILRQEIDNA 813

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             +   V++  E A+M +    + A  + I     M+ T +++
Sbjct: 814 REEVKGVSLDEEMANMIKYQHAFSAAAKVITAVDQMIQTVINM 856



 Score = 42.9 bits (99), Expect = 0.016,   Method: Composition-based stats.
 Identities = 16/108 (14%), Positives = 32/108 (29%), Gaps = 7/108 (6%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV------- 54
             +    + A +G+      M ++  NIANA T G +                       
Sbjct: 4   MSMFGILNTALTGIHAHKLAMNVVGHNIANASTPGYSRQRPVIEANPPIPLTTLTQPSFP 63

Query: 55  MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETA 102
           +    G +VK I   +  F++                  N++ + +  
Sbjct: 64  LQMGTGAKVKTIVRLRDAFLDVQYRQVNNRYNYWDTVLSNLHFIEQLL 111


>gi|255523679|ref|ZP_05390645.1| protein of unknown function DUF1078 domain protein [Clostridium
           carboxidivorans P7]
 gi|255512548|gb|EET88822.1| protein of unknown function DUF1078 domain protein [Clostridium
           carboxidivorans P7]
          Length = 264

 Score = 46.4 bits (108), Expect = 0.001,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 18/43 (41%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           ++  NVN+  E  DM    R +  + + +K   +M      + 
Sbjct: 220 LEESNVNIGKEMTDMIIAQRAFELSSKAMKTGDEMWGLVNSMK 262



 Score = 38.3 bits (87), Expect = 0.35,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 19/42 (45%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++     + S +  Q  ++  IS NIAN  TTG       ++
Sbjct: 1  MLRILWGSKSAMNAQQDKLDSISNNIANESTTGYKREDVSFQ 42


>gi|114562342|ref|YP_749855.1| flagellar hook protein FlgE [Shewanella frigidimarina NCIMB 400]
 gi|114333635|gb|ABI71017.1| flagellar basal body FlaE domain protein [Shewanella frigidimarina
           NCIMB 400]
          Length = 459

 Score = 46.4 bits (108), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/103 (18%), Positives = 40/103 (38%)

Query: 29  IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASG 88
           I  + + G T           + E+ +   G    K      +    E + G   +  S 
Sbjct: 356 ITASYSNGSTVPLSRVALVRFANEQGLTQVGNTSWKASLDSGAALAGEANSGTFGSIRSS 415

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            ++  NV++  E  D+    R + AN +T++ ++ +  T L +
Sbjct: 416 ALEQSNVDLTTELVDLISAQRNFQANSRTLEVNNTLNQTILQI 458



 Score = 39.1 bits (89), Expect = 0.19,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 17/39 (43%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          S +IA SG+A     +   + NIAN  T G       + 
Sbjct: 2  SFNIALSGIAAAQKDLNTTANNIANVNTIGFKESRAEFA 40


>gi|219682254|ref|YP_002468638.1| flagellar hook protein FlgE [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|219621987|gb|ACL30143.1| flagellar hook protein FlgE [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
          Length = 408

 Score = 46.4 bits (108), Expect = 0.001,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 22/42 (52%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           ++  NV++  E  +M    R Y +N Q+ K    ++ T ++L
Sbjct: 366 LEVSNVDLNKELINMIIAQRNYQSNAQSFKTEDKIINTLINL 407


>gi|307945688|ref|ZP_07661024.1| flagellar basal body FlaE domain protein [Roseibium sp. TrichSKD4]
 gi|307771561|gb|EFO30786.1| flagellar basal body FlaE domain protein [Roseibium sp. TrichSKD4]
          Length = 459

 Score = 46.4 bits (108), Expect = 0.001,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 25/47 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
              V+  N ++  E + +  T + Y AN + +  + +M+ + L+++R
Sbjct: 413 PEAVELSNADIATEFSKLIVTQQAYSANSRIVTSADEMLDSALNMVR 459



 Score = 34.8 bits (78), Expect = 3.7,   Method: Composition-based stats.
 Identities = 14/44 (31%), Positives = 23/44 (52%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
            +  + + A SGL  QS  ++ IS N+AN++TTG       + 
Sbjct: 1  MGIYGAINSAVSGLTAQSRALENISGNVANSQTTGYKRLDTTFA 44


>gi|261409668|ref|YP_003245909.1| fagellar hook-basal body protein [Paenibacillus sp. Y412MC10]
 gi|261286131|gb|ACX68102.1| fagellar hook-basal body protein [Paenibacillus sp. Y412MC10]
          Length = 275

 Score = 46.4 bits (108), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 25/73 (34%), Gaps = 2/73 (2%)

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
           G    +    D +       P   V   SG V+  NVN+  E   M E  R Y    + +
Sbjct: 203 GNGLAEGDVFDTTPPAPGEPPKSKV--LSGFVEQSNVNLTDELTKMMEVQRAYQLTARAL 260

Query: 119 KQSHDMMTTTLDL 131
             S  MM     +
Sbjct: 261 SSSDTMMNLANTM 273



 Score = 35.6 bits (80), Expect = 2.5,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 30/70 (42%), Gaps = 7/70 (10%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +  S   A   +     R+ +I++N+AN  T G       Y++K  SFE+V+    G   
Sbjct: 1  MNNSMISAMVSMNALQQRLDVIADNMANVNTAG-------YKKKEASFEDVLTQVQGHHK 53

Query: 64 KKIGVDQSTF 73
                ++T 
Sbjct: 54 DFDRTGRATP 63


>gi|148269976|ref|YP_001244436.1| flagellar hook-associated protein FlgK [Thermotoga petrophila
           RKU-1]
 gi|147735520|gb|ABQ46860.1| flagellar hook-associated protein FlgK [Thermotoga petrophila
           RKU-1]
          Length = 858

 Score = 46.4 bits (108), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/103 (13%), Positives = 35/103 (33%), Gaps = 1/103 (0%)

Query: 30  ANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK-KIGVDQSTFVEEFDPGHPVANASG 88
           AN             +  +   E      GGV  +  +  + ++ ++           + 
Sbjct: 754 ANPELLETIQNLYTRKILSNGKESFYEFFGGVVSELGVEAETASNLKNNTEILRQEIDNA 813

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             +   V++  E A+M +    + A  + I     M+ T +++
Sbjct: 814 REEVKGVSLDEEMANMIKYQHAFSAAAKVITAVDQMIQTVINM 856



 Score = 42.6 bits (98), Expect = 0.017,   Method: Composition-based stats.
 Identities = 16/108 (14%), Positives = 32/108 (29%), Gaps = 7/108 (6%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV------- 54
             +    + A +G+      M ++  NIANA T G +                       
Sbjct: 4   MSMFGILNTALTGIHAHKLAMNVVGHNIANASTPGYSRQRPVIEANPPIPLTTLTQPSFP 63

Query: 55  MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETA 102
           +    G +VK I   +  F++                  N++ + +  
Sbjct: 64  LQMGTGAKVKTIVRLRDAFLDVQYRQVNNRYNYWDTVLSNLHFIEQLL 111


>gi|78221659|ref|YP_383406.1| flagellar hook-associated protein [Geobacter metallireducens GS-15]
 gi|78192914|gb|ABB30681.1| Flagellar hook-associated protein [Geobacter metallireducens GS-15]
          Length = 477

 Score = 46.4 bits (108), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/106 (18%), Positives = 35/106 (33%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             + +   I  S L  Q   +++ SENI N  T G +  +        + E       GV
Sbjct: 1   MAIQSILDIGKSSLIAQRLALEVTSENITNVNTPGYSRQTTVLATGITTMERGFPMGTGV 60

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
           +V  I      F++         N  G     ++    +  +   T
Sbjct: 61  KVADIQRAYDAFLQSQLSKENTDNGFGTAVLSSMKRTEQLFNDLTT 106



 Score = 39.1 bits (89), Expect = 0.18,   Method: Composition-based stats.
 Identities = 21/105 (20%), Positives = 36/105 (34%), Gaps = 2/105 (1%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           N ++             T      + G     V K+GV         D    +      +
Sbjct: 373 NNKSASSIASIYDKVLATSGGNLTLEGFFNSLVGKVGVSVQDATRRADQSGGILKQLDNL 432

Query: 91  KYPN--VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  N  V++  E A++ +  + Y    + I    DMM T L L+R
Sbjct: 433 RESNSGVSLDEELANLVKYQKAYEGAAKLINVGSDMMDTILGLIR 477


>gi|330889084|gb|EGH21745.1| flagellar hook protein FlgE [Pseudomonas syringae pv. mori str.
           301020]
          Length = 419

 Score = 46.4 bits (108), Expect = 0.001,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 17/41 (41%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           ++  NV +  E   + +    Y AN + I     +M T + 
Sbjct: 377 LEGANVVLADELIALIQAQTAYQANSKAISTEATVMQTLIQ 417


>gi|320530444|ref|ZP_08031502.1| putative flagellar basal body rod protein FlgG [Selenomonas
           artemidis F0399]
 gi|320137277|gb|EFW29201.1| putative flagellar basal body rod protein FlgG [Selenomonas
           artemidis F0399]
          Length = 266

 Score = 46.4 bits (108), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/117 (12%), Positives = 38/117 (32%), Gaps = 4/117 (3%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVD-QSTF 73
           L+ Q   + I ++     R      G        I+    +       V K G +     
Sbjct: 147 LSAQGRPINIPAD---ATRVNVSGDGRIYVGNTEIAQLGFVQFDAPDAVIKQGDNLYRPQ 203

Query: 74  VEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
                         G+++  N +++ E  ++    R+Y A  + ++    ++   ++
Sbjct: 204 EGARPTQATGTIEQGLLEMSNTSIVTEMVELINNYRVYEAGSRAVQTQDSLLDKAVN 260



 Score = 36.8 bits (83), Expect = 1.2,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 20/42 (47%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          +    +IA SG+  ++    +I+ N+ANA  TG        R
Sbjct: 1  MWRGLYIAASGMITETKHTDMIANNLANASNTGFKRDDMAIR 42


>gi|154175384|ref|YP_001408368.1| flagellar hook-associated protein FlgK [Campylobacter curvus
          525.92]
 gi|112802604|gb|EAT99948.1| flagellar hook-associated protein FlgK [Campylobacter curvus
          525.92]
          Length = 623

 Score = 46.4 bits (108), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/73 (19%), Positives = 21/73 (28%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  +  S +   SGL     ++     NIANA +   T                     G
Sbjct: 1  MANIFMSLNTGVSGLNAAQTQISTTGNNIANADSAYYTRQRVVQSASPAMNTVPGGVGTG 60

Query: 61 VRVKKIGVDQSTF 73
           +V  +      F
Sbjct: 61 TQVDTVKRIHDEF 73



 Score = 43.7 bits (101), Expect = 0.007,   Method: Composition-based stats.
 Identities = 14/114 (12%), Positives = 26/114 (22%), Gaps = 4/114 (3%)

Query: 24  IISEN-IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGH- 81
           ++  N +AN            Y   T    +                 +         + 
Sbjct: 510 VVGNNEVANKMVQLQYTKQTFYSNGTALDRDETIEGYYRYFTTDIASDTEANNTTHDTNT 569

Query: 82  --PVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
                          V+   E  ++      Y A  + I     M+ T L L +
Sbjct: 570 ALQKTAEEEFQSISGVDTNEELTNLIRFQASYGAAAKIITTVDQMLDTLLTLKQ 623


>gi|30062613|ref|NP_836784.1| flagellar hook protein FlgE [Shigella flexneri 2a str. 2457T]
 gi|161485924|ref|NP_706995.2| flagellar hook protein FlgE [Shigella flexneri 2a str. 301]
 gi|30040859|gb|AAP16590.1| flagellar hook protein FlgE [Shigella flexneri 2a str. 2457T]
 gi|313650473|gb|EFS14880.1| flagellar hook protein flgE [Shigella flexneri 2a str. 2457T]
 gi|332758235|gb|EGJ88558.1| flagellar hook protein flgE [Shigella flexneri 4343-70]
 gi|333005591|gb|EGK25109.1| flagellar hook protein flgE [Shigella flexneri K-218]
          Length = 402

 Score = 46.4 bits (108), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 26/51 (50%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +     +G ++  NV++  E  +M    R Y +N QTIK    ++ T ++L
Sbjct: 351 NFGTLTNGALEASNVDLSKELVNMIVAQRNYKSNAQTIKTQDQILNTRVNL 401



 Score = 34.8 bits (78), Expect = 3.6,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 4/63 (6%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          +   A SGL   +  + +I  NIAN+ T G   G+  +               GV+V  I
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFA----DMFAGSKVGLGVKVAGI 57

Query: 67 GVD 69
            D
Sbjct: 58 TQD 60


>gi|225871945|ref|YP_002753399.1| flagellar basal-body rod protein FlgG [Acidobacterium capsulatum
           ATCC 51196]
 gi|225791437|gb|ACO31527.1| flagellar basal-body rod protein FlgG [Acidobacterium capsulatum
           ATCC 51196]
          Length = 262

 Score = 46.4 bits (108), Expect = 0.001,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 23/48 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             G ++  NV+V+     M    R Y +N + IK +  M +   ++++
Sbjct: 215 QQGYLENSNVDVVGAFVQMVLAQRAYESNSKVIKAADGMYSEVNNMVQ 262



 Score = 41.0 bits (94), Expect = 0.050,   Method: Composition-based stats.
 Identities = 11/36 (30%), Positives = 20/36 (55%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTP 39
          +I + + A SG++ Q   +  I+ N+AN+ T G   
Sbjct: 1  MIRALYTAASGMSAQQMNLDTIANNLANSSTVGFRE 36


>gi|83646774|ref|YP_435209.1| flagellar hook protein FlgE [Hahella chejuensis KCTC 2396]
 gi|83634817|gb|ABC30784.1| Flagellar hook protein FlgE [Hahella chejuensis KCTC 2396]
          Length = 660

 Score = 46.4 bits (108), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/97 (18%), Positives = 33/97 (34%)

Query: 37  DTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVN 96
               + P              S G  +   G D    V   + G         ++  NV 
Sbjct: 562 GQEKTGPQVAMANFLNVNALTSEGGSLFSAGEDAGITVGAANSGGFGKVKGESIELSNVE 621

Query: 97  VLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  E A++    R Y A+ Q +  S++M+    + +R
Sbjct: 622 LSREFAEIIIIQRGYQASSQVMNVSNEMIENLYNSVR 658


>gi|261420741|ref|YP_003254423.1| fagellar hook-basal body protein [Geobacillus sp. Y412MC61]
 gi|319768411|ref|YP_004133912.1| flagellar hook-basal body protein [Geobacillus sp. Y412MC52]
 gi|261377198|gb|ACX79941.1| fagellar hook-basal body protein [Geobacillus sp. Y412MC61]
 gi|317113277|gb|ADU95769.1| flagellar hook-basal body protein [Geobacillus sp. Y412MC52]
          Length = 276

 Score = 46.4 bits (108), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/116 (10%), Positives = 34/116 (29%), Gaps = 1/116 (0%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFV 74
           L     R+ + SE  +  R  G     +    +          +       +    +  +
Sbjct: 156 LDANGERIPLSSERFS-VRDDGTIIDENGTATRLGVAFAANPQTLVKEGNGLFRSTTGPL 214

Query: 75  EEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            +             ++  NV++     D+    R + AN + ++     +   ++
Sbjct: 215 PQAPGNVTYTVKQRFLERSNVDIERTMTDLLAAYRTFEANQKIVQAYDRSLDKAVN 270



 Score = 40.2 bits (92), Expect = 0.083,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 22/55 (40%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++   + A SG+  Q  R+  ++ N+ANA T G    +   R         +   
Sbjct: 1  MLRGLYTAASGMLAQERRVDWLTNNLANAETPGYKADAAAMRAFPELLMSRLEDQ 55


>gi|329928721|ref|ZP_08282570.1| putative flagellar basal-body rod protein FlgB [Paenibacillus sp.
           HGF5]
 gi|328937502|gb|EGG33920.1| putative flagellar basal-body rod protein FlgB [Paenibacillus sp.
           HGF5]
          Length = 275

 Score = 46.4 bits (108), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 25/73 (34%), Gaps = 2/73 (2%)

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
           G    +    D +       P   V   SG V+  NVN+  E   M E  R Y    + +
Sbjct: 203 GNGLAEGDVFDTTPPAPGEPPKSKV--LSGFVEQSNVNLTDELTKMMEVQRAYQLTARAL 260

Query: 119 KQSHDMMTTTLDL 131
             S  MM     +
Sbjct: 261 SSSDTMMNLANTM 273



 Score = 35.6 bits (80), Expect = 2.6,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 30/70 (42%), Gaps = 7/70 (10%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +  S   A   +     R+ +I++N+AN  T G       Y++K  SFE+V+    G   
Sbjct: 1  MNNSMISAMVSMNALQQRLDVIADNMANVNTAG-------YKKKEASFEDVLTQVQGHHK 53

Query: 64 KKIGVDQSTF 73
                ++T 
Sbjct: 54 DFDRTGRATP 63


>gi|256830177|ref|YP_003158905.1| flagellar basal-body rod protein FlgF [Desulfomicrobium baculatum
           DSM 4028]
 gi|256579353|gb|ACU90489.1| flagellar basal-body rod protein FlgF [Desulfomicrobium baculatum
           DSM 4028]
          Length = 258

 Score = 46.4 bits (108), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 21/51 (41%)

Query: 79  PGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
           P        G ++  NVNV+ E  +M E  R + A  + I  S +     +
Sbjct: 201 PAEDSTVEQGFLEAANVNVVSEMVNMIEAMRAFEAYQKMISGSFEQDKKAI 251


>gi|218887610|ref|YP_002436931.1| flagellar hook-associated protein FlgK [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|218758564|gb|ACL09463.1| flagellar hook-associated protein FlgK [Desulfovibrio vulgaris str.
           'Miyazaki F']
          Length = 702

 Score = 46.4 bits (108), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/116 (17%), Positives = 34/116 (29%), Gaps = 10/116 (8%)

Query: 28  NIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR--------VKKIGVDQSTFVEEFDP 79
           N ANA              K ++       +            V  +G D ++       
Sbjct: 587 NEANAGDNDTATAIAGLATKEVTISTTFERASSQTLSEYYSAIVATVGADTASTKFNAAY 646

Query: 80  GHPVANA--SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
              +A            VN+  E A + +    Y A  + +  +  MM T L L +
Sbjct: 647 TATLAKDLDERQSASSGVNLDEEMASLVKFQHAYKAAAKLVTTADQMMQTLLGLKQ 702


>gi|254461663|ref|ZP_05075079.1| flagellar basal-body rod protein FlgG [Rhodobacterales bacterium
           HTCC2083]
 gi|206678252|gb|EDZ42739.1| flagellar basal-body rod protein FlgG [Rhodobacteraceae bacterium
           HTCC2083]
          Length = 262

 Score = 46.4 bits (108), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/71 (22%), Positives = 28/71 (39%)

Query: 55  MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
           +   G   + +        V             G ++  NVNV+ +  +M ET R Y  +
Sbjct: 185 LQPVGESFLVQTAASGDPTVASPQAQGIGKLVQGSLESSNVNVVQQLVEMIETQRAYEVS 244

Query: 115 LQTIKQSHDMM 125
            ++I  S +MM
Sbjct: 245 SKSITASDEMM 255



 Score = 41.8 bits (96), Expect = 0.029,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 21/40 (52%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
            + H+A +GL  Q  RMQ+I+ N++N  T G       +
Sbjct: 3  SNAMHVAKTGLNAQQTRMQVIANNLSNLNTVGFKSDRVNF 42


>gi|118589967|ref|ZP_01547371.1| flagellar basal body FlaE [Stappia aggregata IAM 12614]
 gi|118437464|gb|EAV44101.1| flagellar basal body FlaE [Stappia aggregata IAM 12614]
          Length = 424

 Score = 46.4 bits (108), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/44 (31%), Positives = 24/44 (54%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  NV++  E   M E+ R Y AN Q  K   D++   ++L+R
Sbjct: 381 LEDSNVDLGNELTSMIESQRTYTANSQVFKAGSDLLEQLVNLVR 424



 Score = 41.8 bits (96), Expect = 0.032,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 26/64 (40%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            L        SG+  QS+++  ++ENI N+ TTG       +    +S       SGGV
Sbjct: 1  MGLFGVMRSGVSGMNAQSSKLGTVAENIMNSSTTGYKRAKSEFSSLVVSQGAGSFNSGGV 60

Query: 62 RVKK 65
              
Sbjct: 61 EAHT 64


>gi|120598233|ref|YP_962807.1| flagellar basal body rod protein FlgF [Shewanella sp. W3-18-1]
 gi|120558326|gb|ABM24253.1| flagellar basal-body rod protein FlgF [Shewanella sp. W3-18-1]
          Length = 247

 Score = 46.4 bits (108), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 25/50 (50%)

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           A  SG V+  NVN + E   + E  R +   ++ +K + ++   +  L+R
Sbjct: 196 AVESGAVEGSNVNPVDEMVSLIELQRQFEMQVKMMKTAEEIDRASSSLMR 245


>gi|299066542|emb|CBJ37732.1| Putative flagellar hook protein (flgE) [Ralstonia solanacearum
           CMR15]
          Length = 395

 Score = 46.4 bits (108), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 32/72 (44%)

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           G    K+   Q+        G      SG+V+  NV++  E +++    R Y A+ Q + 
Sbjct: 321 GNNEFKVVNGQAWETGVAGTGAFGTLHSGMVENSNVDLSQEFSNLVIMQRGYQASSQVVS 380

Query: 120 QSHDMMTTTLDL 131
            ++DM++    +
Sbjct: 381 TANDMLSELFSM 392


>gi|257484948|ref|ZP_05638989.1| flagellar basal-body protein, putative [Pseudomonas syringae pv.
           tabaci ATCC 11528]
 gi|331011043|gb|EGH91099.1| flagellar hook protein FlgE [Pseudomonas syringae pv. tabaci ATCC
           11528]
          Length = 586

 Score = 46.4 bits (108), Expect = 0.001,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 17/41 (41%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           ++  NV +  E   + +    Y AN + I     +M T + 
Sbjct: 544 LEGSNVVLADELIALIQAQTAYQANSKAISTEATVMQTLIQ 584


>gi|222112615|ref|YP_002554879.1| flagellar basal body rod protein [Acidovorax ebreus TPSY]
 gi|221732059|gb|ACM34879.1| flagellar basal body rod protein [Acidovorax ebreus TPSY]
          Length = 107

 Score = 46.4 bits (108), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/127 (17%), Positives = 36/127 (28%), Gaps = 30/127 (23%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           + A A IA SGL     R+   + N+AN  T G T      +                + 
Sbjct: 8   MTALASIARSGLQAAQLRLGTSAHNVANLNTPGFTRQVVDQQAAPAQGGVQARTGRSGQ- 66

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
                                        P V +  E  +       + A+L  ++ + +
Sbjct: 67  -----------------------------PGVALEAEAVEQMAATYAFKASLLVLRTADE 97

Query: 124 MMTTTLD 130
           M    LD
Sbjct: 98  MAGALLD 104


>gi|229102353|ref|ZP_04233061.1| Flagellar hook protein flgE [Bacillus cereus Rock3-28]
 gi|229115194|ref|ZP_04244604.1| Flagellar hook protein flgE [Bacillus cereus Rock1-3]
 gi|228668334|gb|EEL23766.1| Flagellar hook protein flgE [Bacillus cereus Rock1-3]
 gi|228681000|gb|EEL35169.1| Flagellar hook protein flgE [Bacillus cereus Rock3-28]
          Length = 407

 Score = 46.4 bits (108), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 24/43 (55%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV++ VE  D+    R +  N + IK S +++   ++L+R
Sbjct: 365 EGANVDLSVEFVDLMLYQRGFQGNAKVIKVSDEVLNEVVNLIR 407



 Score = 38.7 bits (88), Expect = 0.28,   Method: Composition-based stats.
 Identities = 13/69 (18%), Positives = 30/69 (43%), Gaps = 6/69 (8%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I + + + +G+      + + S NIANA+T G        ++K +  + + + S G + 
Sbjct: 1  MIKALYTSITGMNATQNALSVTSNNIANAQTVG------YKKQKAMFDDLLYNNSIGAKG 54

Query: 64 KKIGVDQST 72
                 + 
Sbjct: 55 DGKYAGTNP 63


>gi|223040539|ref|ZP_03610811.1| flagellar hook-associated protein FlgK [Campylobacter rectus
          RM3267]
 gi|222878174|gb|EEF13283.1| flagellar hook-associated protein FlgK [Campylobacter rectus
          RM3267]
          Length = 617

 Score = 46.4 bits (108), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/73 (19%), Positives = 23/73 (31%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  + +S HI  +GL     ++     NI NA     T        +    +       G
Sbjct: 1  MANIFSSLHIGMTGLDAAQTQITTTGHNITNADNEHYTRQRVVQSAREAFHDIPGDIGTG 60

Query: 61 VRVKKIGVDQSTF 73
           +V  +      F
Sbjct: 61 TQVDTVVRVHDEF 73



 Score = 37.5 bits (85), Expect = 0.63,   Method: Composition-based stats.
 Identities = 15/116 (12%), Positives = 30/116 (25%), Gaps = 9/116 (7%)

Query: 27  ENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANA 86
            N                 +K I + +                 +    E    + + +A
Sbjct: 502 SNPTPGNNEVANDMVQMQYKKIIFYSDKHADKEESVEGYYRYITTDLASETQSNNDLNDA 561

Query: 87  SGIVKY---------PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  +             VN+  E  ++      Y A  + I     M+ T L L +
Sbjct: 562 NAAIHKVAMSEHQSVSGVNLNEELTNLIRFQSSYGAAAKIITTVEKMLDTLLMLKQ 617


>gi|94987182|ref|YP_595115.1| flagellar basal body rod protein [Lawsonia intracellularis
           PHE/MN1-00]
 gi|94731431|emb|CAJ54794.1| Flagellar basal body rod protein [Lawsonia intracellularis
           PHE/MN1-00]
          Length = 264

 Score = 46.4 bits (108), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 20/43 (46%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
             G ++  NVNV+ E   M E NR + A  + ++ S  +    
Sbjct: 213 NQGFLESSNVNVVEEMVKMIEVNRQFDAYQKVMQTSDSLDREA 255


>gi|330986469|gb|EGH84572.1| flagellar hook protein FlgE [Pseudomonas syringae pv. lachrymans
           str. M301315]
          Length = 586

 Score = 46.4 bits (108), Expect = 0.001,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 17/41 (41%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           ++  NV +  E   + +    Y AN + I     +M T + 
Sbjct: 544 LEGSNVVLADELIALIQAQTAYQANSKAISTEATVMQTLIQ 584


>gi|325295212|ref|YP_004281726.1| flagellar hook-associated protein FlgK [Desulfurobacterium
           thermolithotrophum DSM 11699]
 gi|325065660|gb|ADY73667.1| flagellar hook-associated protein FlgK [Desulfurobacterium
           thermolithotrophum DSM 11699]
          Length = 451

 Score = 46.4 bits (108), Expect = 0.001,   Method: Composition-based stats.
 Identities = 10/51 (19%), Positives = 25/51 (49%)

Query: 83  VANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            A +  + +  +VN+  E  ++    R Y A  + +  + +++ T L ++R
Sbjct: 401 QAISDKMKELSSVNMDEELLNLTRYQRAYEAAAKVVNVTDELLQTILGMVR 451


>gi|298487856|ref|ZP_07005896.1| Flagellar hook protein flgE [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
 gi|298157581|gb|EFH98661.1| Flagellar hook protein flgE [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
          Length = 586

 Score = 46.4 bits (108), Expect = 0.001,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 17/41 (41%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           ++  NV +  E   + +    Y AN + I     +M T + 
Sbjct: 544 LEGSNVVLADELIALIQAQTAYQANSKAISTEATVMQTLIQ 584


>gi|83814111|ref|YP_446742.1| flagellar basal-body rod protein [Salinibacter ruber DSM 13855]
 gi|83755505|gb|ABC43618.1| flagellar basal-body rod protein [Salinibacter ruber DSM 13855]
          Length = 241

 Score = 46.4 bits (108), Expect = 0.001,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 20/41 (48%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           V+  NV+ + E  +M E  R + A  +TI+ +  ++     
Sbjct: 196 VETSNVDPVTELTNMIEIQRQFEAQQKTIQTTDGVLGRATQ 236


>gi|289651646|ref|ZP_06482989.1| flagellar hook protein FlgE [Pseudomonas syringae pv. aesculi str.
           2250]
          Length = 586

 Score = 46.4 bits (108), Expect = 0.001,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 17/41 (41%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           ++  NV +  E   + +    Y AN + I     +M T + 
Sbjct: 544 LEGSNVVLADELIALIQAQTAYQANSKAISTEATVMQTLIQ 584


>gi|289627764|ref|ZP_06460718.1| flagellar hook protein FlgE [Pseudomonas syringae pv. aesculi str.
           NCPPB3681]
 gi|330866423|gb|EGH01132.1| flagellar hook protein FlgE [Pseudomonas syringae pv. aesculi str.
           0893_23]
          Length = 586

 Score = 46.4 bits (108), Expect = 0.001,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 17/41 (41%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           ++  NV +  E   + +    Y AN + I     +M T + 
Sbjct: 544 LEGSNVVLADELIALIQAQTAYQANSKAISTEATVMQTLIQ 584


>gi|118443708|ref|YP_877999.1| flagellar basal body rod protein FlgG [Clostridium novyi NT]
 gi|118134164|gb|ABK61208.1| flagellar basal-body rod protein FlgG [Clostridium novyi NT]
          Length = 266

 Score = 46.4 bits (108), Expect = 0.001,   Method: Composition-based stats.
 Identities = 11/54 (20%), Positives = 25/54 (46%)

Query: 77  FDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
               +        ++  NVNV+ E +DM  T R + +N + ++   + +  T++
Sbjct: 208 PRAYNGAIVKQNYLEKSNVNVMEEVSDMMMTMRNFESNQKLVQSLDETLGKTVN 261



 Score = 36.0 bits (81), Expect = 1.8,   Method: Composition-based stats.
 Identities = 17/59 (28%), Positives = 25/59 (42%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
          +I S + A SGL  Q A+  +IS N+ANA T G    +   +              G +
Sbjct: 1  MIRSIYTAVSGLINQEAQQDVISNNLANATTVGYKKDNLVGKSFKDVMMHNYDKVVGGK 59


>gi|255099395|ref|ZP_05328372.1| putative flagellar hook-associated protein [Clostridium difficile
           QCD-63q42]
 gi|255305252|ref|ZP_05349424.1| putative flagellar hook-associated protein [Clostridium difficile
           ATCC 43255]
          Length = 436

 Score = 46.4 bits (108), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/107 (19%), Positives = 37/107 (34%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M  L +  + ANSG+      +Q IS NI+N  T G +     +   +  +   +  S  
Sbjct: 1   MAGLFSILNTANSGMNAHQKAIQTISHNISNLDTDGYSRQRTEFATNSPMYMPSLSNSIA 60

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                 GV  +      +  +     +   KY       +  +  ET
Sbjct: 61  RGQLGTGVHVTDVTRARNSFYDYQFRAEAHKYGKTVSKYDYYNTIET 107



 Score = 42.9 bits (99), Expect = 0.016,   Method: Composition-based stats.
 Identities = 5/38 (13%), Positives = 18/38 (47%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             V++  E  ++ +  R Y A+ + +  +  ++   ++
Sbjct: 396 SGVSLDEEMTELIKIQRSYQASAKVMSTAVQLLDVVIN 433


>gi|313894945|ref|ZP_07828504.1| fagellar hook-basal body protein [Selenomonas sp. oral taxon 137
           str. F0430]
 gi|312976398|gb|EFR41854.1| fagellar hook-basal body protein [Selenomonas sp. oral taxon 137
           str. F0430]
          Length = 266

 Score = 46.4 bits (108), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/117 (12%), Positives = 38/117 (32%), Gaps = 4/117 (3%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVD-QSTF 73
           L+ Q   + I ++     R      G        I+    +       V K G +     
Sbjct: 147 LSAQGRPINIPAD---ATRVNVSGDGRIYVGNTEIAQLGFVQFDAPDAVIKQGDNLYRPQ 203

Query: 74  VEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
                         G+++  N +++ E  ++    R+Y A  + ++    ++   ++
Sbjct: 204 EGARPTQATGTIEQGLLEMSNTSIVTEMVELINNYRVYEAGSRAVQTQDSLLDKAVN 260



 Score = 36.4 bits (82), Expect = 1.3,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 20/42 (47%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          +    +IA SG+  ++    +I+ N+ANA  TG        R
Sbjct: 1  MWRGLYIAASGMITETKHTDMIANNLANASNTGFKRDDMAIR 42


>gi|238927618|ref|ZP_04659378.1| possible flagellar basal-body rod protein [Selenomonas flueggei
           ATCC 43531]
 gi|238884543|gb|EEQ48181.1| possible flagellar basal-body rod protein [Selenomonas flueggei
           ATCC 43531]
          Length = 266

 Score = 46.4 bits (108), Expect = 0.001,   Method: Composition-based stats.
 Identities = 7/45 (15%), Positives = 22/45 (48%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             G+++  N +V+ E  ++    R+Y A  + ++    ++   ++
Sbjct: 216 EQGMLEMSNTSVVTEMVELINNYRVYEAGSKAVQTQDTLLDKAVN 260



 Score = 37.2 bits (84), Expect = 0.76,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 21/42 (50%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          +    +IA SG+  ++    +I+ N+ANA TTG        R
Sbjct: 1  MWRGLYIAASGMITETKHTDMIANNLANAATTGFKRDDMAIR 42


>gi|206896319|ref|YP_002246665.1| flagellar hook protein FlgE [Coprothermobacter proteolyticus DSM
           5265]
 gi|206738936|gb|ACI18014.1| flagellar hook protein FlgE [Coprothermobacter proteolyticus DSM
           5265]
          Length = 221

 Score = 46.4 bits (108), Expect = 0.001,   Method: Composition-based stats.
 Identities = 6/46 (13%), Positives = 22/46 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            +  ++  NV++  E   +    R Y  + +  + + +++  +++L
Sbjct: 173 TANALEMSNVDLSAEMVKLIAAQRAYQFSAKAFRNADELIEASINL 218


>gi|297531535|ref|YP_003672810.1| fagellar hook-basal body protein [Geobacillus sp. C56-T3]
 gi|297254787|gb|ADI28233.1| fagellar hook-basal body protein [Geobacillus sp. C56-T3]
          Length = 276

 Score = 46.4 bits (108), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/116 (10%), Positives = 34/116 (29%), Gaps = 1/116 (0%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFV 74
           L     R+ + SE  +  R  G     +    +          +       +    +  +
Sbjct: 156 LDANGERIPLSSERFS-VRDDGTIIDENGTATRLGVAFAANPQTLVKEGNGLFRSTTGPL 214

Query: 75  EEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            +             ++  NV++     D+    R + AN + ++     +   ++
Sbjct: 215 PQAPGNVTYTVKQRFLERSNVDIERTMTDLLAAYRTFEANQKIVQAYDRSLDKAVN 270



 Score = 40.2 bits (92), Expect = 0.090,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 22/55 (40%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++   + A SG+  Q  R+  ++ N+ANA T G    +   R         +   
Sbjct: 1  MLRGLYTAASGMLAQERRVDWLTNNLANAETPGYKADAAAMRAFPELLMSRLEDQ 55


>gi|27363704|ref|NP_759232.1| flagellar basal body rod protein FlgF [Vibrio vulnificus CMCP6]
 gi|27359820|gb|AAO08759.1| flagellar basal-body rod protein FlgF [Vibrio vulnificus CMCP6]
          Length = 249

 Score = 46.4 bits (108), Expect = 0.001,   Method: Composition-based stats.
 Identities = 11/62 (17%), Positives = 28/62 (45%)

Query: 72  TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
              + ++    V   +G ++  NVN + E   + +  R +   ++ +  + +M  ++  L
Sbjct: 186 EPNQPYEADPTVQIMTGAIEGSNVNAVGEMTALIDLQRQFEMQVKMMSTAEEMDKSSDSL 245

Query: 132 LR 133
           LR
Sbjct: 246 LR 247


>gi|330721008|gb|EGG99169.1| Flagellar hook protein FlgE [gamma proteobacterium IMCC2047]
          Length = 92

 Score = 46.4 bits (108), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/83 (18%), Positives = 28/83 (33%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            S  E +   G  +  +     +  V            SG ++  NV++  E   +    
Sbjct: 9   FSNVEGLSPQGNTQWAETFDSGNPVVGTPGSASLGVLQSGALEESNVDLSAELVSLILAQ 68

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y AN + I+    +    L +
Sbjct: 69  RNYQANARAIETESAVTQAILQI 91


>gi|320329353|gb|EFW85346.1| flagellar hook protein FlgE [Pseudomonas syringae pv. glycinea str.
           race 4]
 gi|330880525|gb|EGH14674.1| flagellar hook protein FlgE [Pseudomonas syringae pv. glycinea str.
           race 4]
          Length = 586

 Score = 46.4 bits (108), Expect = 0.001,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 17/41 (41%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           ++  NV +  E   + +    Y AN + I     +M T + 
Sbjct: 544 LEGSNVVLADELIALIQAQTAYQANSKAISTEATVMQTLIQ 584


>gi|330445348|ref|ZP_08309000.1| conserved hypothetical protein [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328489539|dbj|GAA03497.1| conserved hypothetical protein [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 467

 Score = 46.0 bits (107), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/104 (16%), Positives = 37/104 (35%)

Query: 28  NIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANAS 87
           NI  + + G            +S E+ +   GG               +   G   A  S
Sbjct: 363 NILASYSNGKDVVVGRVALARVSNEQGLAQLGGTLWNTTQESGQAIWGDASQGSFGAIKS 422

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           G ++  N+++  E  D+    R + A+ + +  ++ +    L +
Sbjct: 423 GTLEQSNIDMTQELVDLITAQRNFQASSRALDVNNQLQQNILQI 466



 Score = 41.4 bits (95), Expect = 0.048,   Method: Composition-based stats.
 Identities = 14/38 (36%), Positives = 17/38 (44%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          S +IA SGL      +   S NIANA T G       +
Sbjct: 2  SMNIALSGLGAAQKDLNTTSNNIANANTFGFKESRAEF 39


>gi|37679148|ref|NP_933757.1| flagellar basal body rod protein FlgF [Vibrio vulnificus YJ016]
 gi|320157108|ref|YP_004189487.1| flagellar basal-body rod protein FlgF [Vibrio vulnificus MO6-24/O]
 gi|37197890|dbj|BAC93728.1| flagellar basal body rod protein FlgF [Vibrio vulnificus YJ016]
 gi|319932420|gb|ADV87284.1| flagellar basal-body rod protein FlgF [Vibrio vulnificus MO6-24/O]
          Length = 249

 Score = 46.0 bits (107), Expect = 0.001,   Method: Composition-based stats.
 Identities = 11/62 (17%), Positives = 28/62 (45%)

Query: 72  TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
              + ++    V   +G ++  NVN + E   + +  R +   ++ +  + +M  ++  L
Sbjct: 186 EPNQPYEADPTVQIMTGAIEGSNVNAVGEMTALIDLQRQFEMQVKMMSTAEEMDKSSDSL 245

Query: 132 LR 133
           LR
Sbjct: 246 LR 247


>gi|331269338|ref|YP_004395830.1| flagellar basal-body rod protein FlgG [Clostridium botulinum
           BKT015925]
 gi|329125888|gb|AEB75833.1| flagellar basal-body rod protein FlgG [Clostridium botulinum
           BKT015925]
          Length = 263

 Score = 46.0 bits (107), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/136 (18%), Positives = 49/136 (36%), Gaps = 13/136 (9%)

Query: 8   AHIANSGLAVQSARMQIISENIANART-------------TGDTPGSDPYRRKTISFEEV 54
            HI  +G  V S+  ++I  N+AN                       + Y     +F+  
Sbjct: 123 FHIDRNGYLVNSSGDKVIGRNLANGANSPINVLVNNSPAKMACNDRGEIYLNGRPAFKMQ 182

Query: 55  MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
           +   G  +  +   D             V      ++  NVNV+ E +DM  T R + +N
Sbjct: 183 VVNFGDYKSLRKIQDNLYSGTNPRETDNVIVKQNCLEKSNVNVMAEVSDMMMTMRNFESN 242

Query: 115 LQTIKQSHDMMTTTLD 130
            + ++   + +  T++
Sbjct: 243 QKIVQALDETLGKTVN 258


>gi|71734109|ref|YP_275562.1| flagellar basal-body protein [Pseudomonas syringae pv. phaseolicola
           1448A]
 gi|71554662|gb|AAZ33873.1| flagellar basal-body protein, putative [Pseudomonas syringae pv.
           phaseolicola 1448A]
          Length = 586

 Score = 46.0 bits (107), Expect = 0.002,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 17/41 (41%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           ++  NV +  E   + +    Y AN + I     +M T + 
Sbjct: 544 LEGSNVVLADELIALIQAQTAYQANSKAISTEATVMQTLIQ 584


>gi|304321132|ref|YP_003854775.1| flagellar basal-body rod protein FlgF [Parvularcula bermudensis
           HTCC2503]
 gi|303300034|gb|ADM09633.1| flagellar basal-body rod protein FlgF [Parvularcula bermudensis
           HTCC2503]
          Length = 238

 Score = 46.0 bits (107), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 24/47 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NV  + E A +    R+Y A  +   Q H+ ++T +D +R
Sbjct: 189 QGFIEGSNVQPVAEFAKLMLAQRMYEAGQKMADQEHERLSTLIDAMR 235


>gi|15642195|ref|NP_231827.1| flagellar basal body rod protein FlgF [Vibrio cholerae O1 biovar El
           Tor str. N16961]
 gi|121586260|ref|ZP_01676050.1| flagellar basal-body rod protein FlgF [Vibrio cholerae 2740-80]
 gi|121726526|ref|ZP_01679775.1| flagellar basal-body rod protein FlgF [Vibrio cholerae V52]
 gi|147673274|ref|YP_001217713.1| flagellar basal body rod protein FlgF [Vibrio cholerae O395]
 gi|153213604|ref|ZP_01948877.1| flagellar basal-body rod protein FlgF [Vibrio cholerae 1587]
 gi|153817120|ref|ZP_01969787.1| flagellar basal-body rod protein FlgF [Vibrio cholerae NCTC 8457]
 gi|153820819|ref|ZP_01973486.1| flagellar basal-body rod protein FlgF [Vibrio cholerae B33]
 gi|153825314|ref|ZP_01977981.1| flagellar basal-body rod protein FlgF [Vibrio cholerae MZO-2]
 gi|153829346|ref|ZP_01982013.1| flagellar basal-body rod protein FlgF [Vibrio cholerae 623-39]
 gi|183179566|ref|ZP_02957777.1| flagellar basal-body rod protein FlgF [Vibrio cholerae MZO-3]
 gi|227082320|ref|YP_002810871.1| flagellar basal-body rod protein FlgF [Vibrio cholerae M66-2]
 gi|229507727|ref|ZP_04397232.1| flagellar basal-body rod protein FlgF [Vibrio cholerae BX 330286]
 gi|229512078|ref|ZP_04401557.1| flagellar basal-body rod protein FlgF [Vibrio cholerae B33]
 gi|229513840|ref|ZP_04403302.1| flagellar basal-body rod protein FlgF [Vibrio cholerae TMA 21]
 gi|229519214|ref|ZP_04408657.1| flagellar basal-body rod protein FlgF [Vibrio cholerae RC9]
 gi|229522145|ref|ZP_04411562.1| flagellar basal-body rod protein FlgF [Vibrio cholerae TM 11079-80]
 gi|229524191|ref|ZP_04413596.1| flagellar basal-body rod protein FlgF [Vibrio cholerae bv. albensis
           VL426]
 gi|229528799|ref|ZP_04418189.1| flagellar basal-body rod protein FlgF [Vibrio cholerae 12129(1)]
 gi|229607231|ref|YP_002877879.1| flagellar basal body rod protein FlgF [Vibrio cholerae MJ-1236]
 gi|254225802|ref|ZP_04919407.1| flagellar basal-body rod protein FlgF [Vibrio cholerae V51]
 gi|254849325|ref|ZP_05238675.1| flagellar basal-body rod protein FlgF [Vibrio cholerae MO10]
 gi|255747105|ref|ZP_05421050.1| flagellar basal-body rod protein FlgF [Vibrio cholera CIRS 101]
 gi|262161351|ref|ZP_06030461.1| flagellar basal-body rod protein FlgF [Vibrio cholerae INDRE 91/1]
 gi|262167778|ref|ZP_06035480.1| flagellar basal-body rod protein FlgF [Vibrio cholerae RC27]
 gi|262191688|ref|ZP_06049864.1| flagellar basal-body rod protein FlgF [Vibrio cholerae CT 5369-93]
 gi|297580842|ref|ZP_06942767.1| flagellar basal-body rod protein FlgF [Vibrio cholerae RC385]
 gi|298500426|ref|ZP_07010231.1| flagellar basal-body rod protein FlgF [Vibrio cholerae MAK 757]
 gi|9656752|gb|AAF95341.1| flagellar basal-body rod protein FlgF [Vibrio cholerae O1 biovar El
           Tor str. N16961]
 gi|121549526|gb|EAX59552.1| flagellar basal-body rod protein FlgF [Vibrio cholerae 2740-80]
 gi|121630979|gb|EAX63358.1| flagellar basal-body rod protein FlgF [Vibrio cholerae V52]
 gi|124115803|gb|EAY34623.1| flagellar basal-body rod protein FlgF [Vibrio cholerae 1587]
 gi|125621708|gb|EAZ50037.1| flagellar basal-body rod protein FlgF [Vibrio cholerae V51]
 gi|126512388|gb|EAZ74982.1| flagellar basal-body rod protein FlgF [Vibrio cholerae NCTC 8457]
 gi|126521611|gb|EAZ78834.1| flagellar basal-body rod protein FlgF [Vibrio cholerae B33]
 gi|146315157|gb|ABQ19696.1| flagellar basal-body rod protein FlgF [Vibrio cholerae O395]
 gi|148875187|gb|EDL73322.1| flagellar basal-body rod protein FlgF [Vibrio cholerae 623-39]
 gi|149740998|gb|EDM55067.1| flagellar basal-body rod protein FlgF [Vibrio cholerae MZO-2]
 gi|183012977|gb|EDT88277.1| flagellar basal-body rod protein FlgF [Vibrio cholerae MZO-3]
 gi|227010208|gb|ACP06420.1| flagellar basal-body rod protein FlgF [Vibrio cholerae M66-2]
 gi|227014092|gb|ACP10302.1| flagellar basal-body rod protein FlgF [Vibrio cholerae O395]
 gi|229332573|gb|EEN98059.1| flagellar basal-body rod protein FlgF [Vibrio cholerae 12129(1)]
 gi|229337772|gb|EEO02789.1| flagellar basal-body rod protein FlgF [Vibrio cholerae bv. albensis
           VL426]
 gi|229341070|gb|EEO06075.1| flagellar basal-body rod protein FlgF [Vibrio cholerae TM 11079-80]
 gi|229343903|gb|EEO08878.1| flagellar basal-body rod protein FlgF [Vibrio cholerae RC9]
 gi|229349021|gb|EEO13978.1| flagellar basal-body rod protein FlgF [Vibrio cholerae TMA 21]
 gi|229352043|gb|EEO16984.1| flagellar basal-body rod protein FlgF [Vibrio cholerae B33]
 gi|229355232|gb|EEO20153.1| flagellar basal-body rod protein FlgF [Vibrio cholerae BX 330286]
 gi|229369886|gb|ACQ60309.1| flagellar basal-body rod protein FlgF [Vibrio cholerae MJ-1236]
 gi|254845030|gb|EET23444.1| flagellar basal-body rod protein FlgF [Vibrio cholerae MO10]
 gi|255735507|gb|EET90907.1| flagellar basal-body rod protein FlgF [Vibrio cholera CIRS 101]
 gi|262023843|gb|EEY42542.1| flagellar basal-body rod protein FlgF [Vibrio cholerae RC27]
 gi|262028662|gb|EEY47316.1| flagellar basal-body rod protein FlgF [Vibrio cholerae INDRE 91/1]
 gi|262032427|gb|EEY50989.1| flagellar basal-body rod protein FlgF [Vibrio cholerae CT 5369-93]
 gi|297534668|gb|EFH73504.1| flagellar basal-body rod protein FlgF [Vibrio cholerae RC385]
 gi|297541119|gb|EFH77173.1| flagellar basal-body rod protein FlgF [Vibrio cholerae MAK 757]
 gi|327484715|gb|AEA79122.1| Flagellar basal-body rod protein FlgF [Vibrio cholerae LMA3894-4]
          Length = 249

 Score = 46.0 bits (107), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/64 (18%), Positives = 28/64 (43%)

Query: 71  STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           +    +F+    V   +G ++  NVN + E   + +  R +   ++ +  + +M   +  
Sbjct: 185 TDPNTQFEADASVKILTGALEGSNVNAIGEMTSLIDLQRQFEMQVKMMSTAEEMDKASDS 244

Query: 131 LLRD 134
           LLR 
Sbjct: 245 LLRS 248


>gi|121596384|ref|YP_988280.1| flagellar basal body rod protein [Acidovorax sp. JS42]
 gi|120608464|gb|ABM44204.1| flagellar basal body rod protein [Acidovorax sp. JS42]
          Length = 101

 Score = 46.0 bits (107), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/127 (18%), Positives = 41/127 (32%), Gaps = 29/127 (22%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +   A IA SGL     R+   + N+AN           P  R+    ++     GGV+ 
Sbjct: 1   MTTLAAIAQSGLQAAQLRLDSSAHNVANLN--------TPGFRRQTVDQQAAPAPGGVQA 52

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
           +      +  V                      +  E  +       + ANL  ++++ +
Sbjct: 53  RVAAPAAAPGVA---------------------LEAEAVEQISATYAFQANLLVLRRADE 91

Query: 124 MMTTTLD 130
           M    LD
Sbjct: 92  MAGALLD 98


>gi|301168504|emb|CBW28094.1| putative flagellar basal-body rod protein [Bacteriovorax marinus
           SJ]
          Length = 289

 Score = 46.0 bits (107), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/58 (18%), Positives = 25/58 (43%)

Query: 73  FVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           F       +  A   G ++  NVN + E +++ + NR + +  + IK    +    ++
Sbjct: 227 FENISTAENKTAVYQGFIEQSNVNAIQEMSELIKANRNFESIQRVIKTYDTISGKGVN 284



 Score = 38.7 bits (88), Expect = 0.30,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 18/38 (47%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
            +  SG   Q  +++ I+ N+ANA T G       ++
Sbjct: 16 LWVPLSGAIAQQRKVETIANNVANANTPGFKKDQIVFK 53


>gi|254712013|ref|ZP_05173824.1| flagellar basal body rod protein FlgG [Brucella ceti M644/93/1]
 gi|254715082|ref|ZP_05176893.1| flagellar basal body rod protein FlgG [Brucella ceti M13/05/1]
 gi|261216792|ref|ZP_05931073.1| flagellar basal-body rod protein FlgG [Brucella ceti M13/05/1]
 gi|261319659|ref|ZP_05958856.1| flagellar basal-body rod protein FlgG [Brucella ceti M644/93/1]
 gi|260921881|gb|EEX88449.1| flagellar basal-body rod protein FlgG [Brucella ceti M13/05/1]
 gi|261292349|gb|EEX95845.1| flagellar basal-body rod protein FlgG [Brucella ceti M644/93/1]
          Length = 241

 Score = 46.0 bits (107), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 21/40 (52%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          + +  IA +G+  Q   +++I+ NIAN  TTG       +
Sbjct: 1  MKALTIAATGMNAQQLNLEVIANNIANINTTGFKRARAEF 40


>gi|218290052|ref|ZP_03494219.1| flagellar basal body rod protein [Alicyclobacillus acidocaldarius
           LAA1]
 gi|218239886|gb|EED07074.1| flagellar basal body rod protein [Alicyclobacillus acidocaldarius
           LAA1]
          Length = 403

 Score = 46.0 bits (107), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/101 (18%), Positives = 30/101 (29%), Gaps = 1/101 (0%)

Query: 34  TTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
                P +        +    +   G       G  Q+  VE            G ++  
Sbjct: 299 DAQGNPVAGGRIGLVDADVAGLQPLGEGEYMVGGSYQAAAVEPLLRASTGRMVFGALESS 358

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMT-TTLDLLR 133
           NVNV    A M +    Y AN +  +    M+     D+ R
Sbjct: 359 NVNVAATMAQMMQALNAYEANQRVAQSVDSMLNVAATDIGR 399


>gi|330830303|ref|YP_004393255.1| flagellar hook protein FlgE [Aeromonas veronii B565]
 gi|328805439|gb|AEB50638.1| Flagellar hook protein FlgE [Aeromonas veronii B565]
          Length = 450

 Score = 46.0 bits (107), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/98 (13%), Positives = 34/98 (34%)

Query: 34  TTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
           +   T           +  + +   G    ++  +         + G      S  ++  
Sbjct: 352 SNATTIKVAMVAMAKFANSQGLTQVGDTSWRQSLLSGDALPGTPNSGTFGTIKSSALEQS 411

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           NV++  E  D+    R + AN ++++ +  +  T L +
Sbjct: 412 NVDLTSELVDLITAQRNFQANSRSLEVNSSLQQTILQI 449



 Score = 37.2 bits (84), Expect = 0.80,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 16/39 (41%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          S + A SG+      + + + NIAN  T G       + 
Sbjct: 2  SFNNALSGVNAAQKDLNVTANNIANVNTMGFKESRAEFA 40


>gi|52082162|ref|YP_080953.1| flagellar basal-body rod protein [Bacillus licheniformis ATCC
           14580]
 gi|52787554|ref|YP_093383.1| FlhO [Bacillus licheniformis ATCC 14580]
 gi|319648039|ref|ZP_08002256.1| FlhO protein [Bacillus sp. BT1B_CT2]
 gi|52005373|gb|AAU25315.1| flagellar basal-body rod protein [Bacillus licheniformis ATCC
           14580]
 gi|52350056|gb|AAU42690.1| FlhO [Bacillus licheniformis ATCC 14580]
 gi|317389674|gb|EFV70484.1| FlhO protein [Bacillus sp. BT1B_CT2]
          Length = 279

 Score = 46.0 bits (107), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/122 (16%), Positives = 43/122 (35%), Gaps = 3/122 (2%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRK--TISFEEVMHGSGGVRVKKIGVDQST 72
           L+ ++  + + SEN   A     T       R    I+ +       G  + +    ++ 
Sbjct: 156 LSTENRPITVGSENFQVAEDGTVTENGQNLGRIDVRIALDTRNLAREGDDLYRTENGEAL 215

Query: 73  FVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH-DMMTTTLDL 131
                +P    +   G+ +  NV+V     +M    R + AN + ++     M     ++
Sbjct: 216 PSAVGNPEVTYSVKQGMTERSNVDVTRAYTEMTAAYRSFEANQKVLQAYDKSMEKAANEI 275

Query: 132 LR 133
            R
Sbjct: 276 GR 277



 Score = 34.8 bits (78), Expect = 3.5,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 19/39 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSD 42
          ++   + A S +  Q  R ++++ NIANA T G      
Sbjct: 1  MLKGLYTATSAMITQQRRTEMLTNNIANANTPGYKEDQG 39


>gi|91976146|ref|YP_568805.1| hypothetical protein RPD_1667 [Rhodopseudomonas palustris BisB5]
 gi|91682602|gb|ABE38904.1| protein of unknown function DUF1078-like [Rhodopseudomonas
           palustris BisB5]
          Length = 610

 Score = 46.0 bits (107), Expect = 0.002,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 21/40 (52%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           N ++  E   +  T + Y AN + I  ++ M+   L+++R
Sbjct: 571 NTDIADEFTKLIVTQQAYSANTKVITTANTMVQDLLNVMR 610


>gi|258513988|ref|YP_003190210.1| flagellar hook-associated protein FlgK [Desulfotomaculum
           acetoxidans DSM 771]
 gi|257777693|gb|ACV61587.1| flagellar hook-associated protein FlgK [Desulfotomaculum
           acetoxidans DSM 771]
          Length = 430

 Score = 46.0 bits (107), Expect = 0.002,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 18/41 (43%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             V++  E  ++ +    Y A  + I     M+ T L ++R
Sbjct: 390 SGVSIEEEMTNLLQYQYGYQAASKIITTIDQMLETLLGIIR 430



 Score = 40.6 bits (93), Expect = 0.064,   Method: Composition-based stats.
 Identities = 15/84 (17%), Positives = 24/84 (28%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M        I    L      M +   N+ANA TTG +                     G
Sbjct: 1  MSGTFFGLEIGKRALQANKTGMDVTGNNVANANTTGYSRQRVNLVTGPPYTGSGYQLGTG 60

Query: 61 VRVKKIGVDQSTFVEEFDPGHPVA 84
          V V  I   ++ +++     +   
Sbjct: 61 VNVGDIERIRNNYIDGQVRSNLSQ 84


>gi|229160717|ref|ZP_04288709.1| Flagellar hook protein flgE [Bacillus cereus R309803]
 gi|228622732|gb|EEK79566.1| Flagellar hook protein flgE [Bacillus cereus R309803]
          Length = 407

 Score = 46.0 bits (107), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 24/43 (55%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV++ VE  D+    R +  N + IK S +++   ++L+R
Sbjct: 365 EGANVDLSVEFVDLMLYQRGFQGNAKVIKISDEVLNEVVNLIR 407



 Score = 39.5 bits (90), Expect = 0.14,   Method: Composition-based stats.
 Identities = 14/69 (20%), Positives = 31/69 (44%), Gaps = 6/69 (8%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I + + + SG+      + + S NIANA+T G        ++K +  + + + S G + 
Sbjct: 1  MIKALYTSISGMNATQNALSVTSNNIANAQTVG------YKKQKAMFDDLLYNNSVGAKG 54

Query: 64 KKIGVDQST 72
           +     + 
Sbjct: 55 DERYAGTNP 63


>gi|242278491|ref|YP_002990620.1| flagellar hook-associated protein FlgK [Desulfovibrio salexigens
           DSM 2638]
 gi|242121385|gb|ACS79081.1| flagellar hook-associated protein FlgK [Desulfovibrio salexigens
           DSM 2638]
          Length = 704

 Score = 46.0 bits (107), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 27/79 (34%)

Query: 54  VMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
           + +  G V V       + F + F                 VN+  E +++ +    Y A
Sbjct: 625 IEYYDGTVAVVGADTGTAKFNKNFQETLASDLNEKQQSVSGVNIDEEMSNLIKYQHSYTA 684

Query: 114 NLQTIKQSHDMMTTTLDLL 132
             + I  +  M+ T L + 
Sbjct: 685 AAKLITTADQMLQTLLGMK 703


>gi|297585402|ref|YP_003701182.1| fagellar hook-basal body protein [Bacillus selenitireducens MLS10]
 gi|297143859|gb|ADI00617.1| fagellar hook-basal body protein [Bacillus selenitireducens MLS10]
          Length = 276

 Score = 46.0 bits (107), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 17/42 (40%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           ++  NV++  E   M E  R Y  N   I  +  M     +L
Sbjct: 234 LEMSNVDMSREMTSMIEAQRAYQFNASAIGITDQMKGLVTNL 275


>gi|327398477|ref|YP_004339346.1| flagellar hook-associated protein FlgK [Hippea maritima DSM 10411]
 gi|327181106|gb|AEA33287.1| flagellar hook-associated protein FlgK [Hippea maritima DSM 10411]
          Length = 580

 Score = 46.0 bits (107), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 22/40 (55%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            V++  E A++ +  R Y AN + I    DM  T ++++R
Sbjct: 541 GVSLDEEAANLIKFQRAYQANAKFISVVDDMTQTLINMVR 580



 Score = 42.2 bits (97), Expect = 0.026,   Method: Composition-based stats.
 Identities = 13/103 (12%), Positives = 33/103 (32%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M  +  + +I  SG+ V  A +     N+AN  T G +            +        G
Sbjct: 1   MPTIFDALNIGVSGIFVNKAAINTTGNNVANVNTPGYSRERVDILPSMPMYSYAGVFGTG 60

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETAD 103
            ++ +I   +   ++          +       +++ +    +
Sbjct: 61  AKIDQIISTRDELIDRRVRASNQEMSYYNKLNSSMDEIQSIFN 103


>gi|225851146|ref|YP_002731380.1| flagellar hook-associated protein FlgK [Persephonella marina EX-H1]
 gi|225645441|gb|ACO03627.1| flagellar hook-associated protein FlgK [Persephonella marina EX-H1]
          Length = 485

 Score = 46.0 bits (107), Expect = 0.002,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 24/43 (55%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  +VN+  E  ++ +  R Y A+ + I  + +++ T L L++
Sbjct: 443 EISSVNLDEELINLTKLQRAYEASAKIINVTDELLQTLLGLVK 485


>gi|222834411|gb|EEE72888.1| predicted protein [Populus trichocarpa]
          Length = 280

 Score = 46.0 bits (107), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 21/40 (52%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
           V+  NV++  +  ++    R Y AN QTIK    +M T +
Sbjct: 9   VEESNVDLSGQLVNLIVAQRNYQANAQTIKAQDTVMQTLI 48



 Score = 38.7 bits (88), Expect = 0.31,   Method: Composition-based stats.
 Identities = 12/64 (18%), Positives = 22/64 (34%)

Query: 71  STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
              V+       V   SG ++  NVN +    +M    R +   ++ I  +         
Sbjct: 216 RPGVDPLQQDPNVRVISGALEGSNVNPVESMVEMIANARRFEMQMKMITGADSNDQRANA 275

Query: 131 LLRD 134
           LL +
Sbjct: 276 LLSN 279


>gi|126653432|ref|ZP_01725528.1| flagellar basal-body rod protein [Bacillus sp. B14905]
 gi|126589788|gb|EAZ83921.1| flagellar basal-body rod protein [Bacillus sp. B14905]
          Length = 210

 Score = 46.0 bits (107), Expect = 0.002,   Method: Composition-based stats.
 Identities = 7/45 (15%), Positives = 17/45 (37%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
               ++  NV+      D+    R + AN + ++     M   ++
Sbjct: 161 RQNFLEGSNVDSGRAMTDLMTAYRAFEANQKVLQAYDRSMEKAVN 205


>gi|86750926|ref|YP_487422.1| hypothetical protein RPB_3817 [Rhodopseudomonas palustris HaA2]
 gi|86573954|gb|ABD08511.1| conserved hypothetical protein [Rhodopseudomonas palustris HaA2]
          Length = 598

 Score = 46.0 bits (107), Expect = 0.002,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 21/40 (52%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           N ++  E   +  T + Y AN + I  ++ M+   L+++R
Sbjct: 559 NTDIADEFTKLIVTQQAYSANTKVITTANTMVQDLLNVMR 598


>gi|74101658|gb|AAZ99748.1| FlgEL [Aeromonas hydrophila]
          Length = 397

 Score = 46.0 bits (107), Expect = 0.002,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 18/41 (43%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            +  NV++  E   +  + R Y AN +TI  +  M     +
Sbjct: 355 YESSNVDLTGELVSLMTSQRNYQANAKTISSADKMTQVLFN 395



 Score = 33.7 bits (75), Expect = 8.1,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 18/40 (45%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR 46
          S  I  SGL   +  + +IS N+ANA T G       +  
Sbjct: 2  SFSIGLSGLRAVNQELSVISNNVANASTAGFKSSRAEFAA 41


>gi|182412238|ref|YP_001817304.1| hypothetical protein Oter_0414 [Opitutus terrae PB90-1]
 gi|177839452|gb|ACB73704.1| protein of unknown function DUF1078 [Opitutus terrae PB90-1]
          Length = 312

 Score = 46.0 bits (107), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/79 (15%), Positives = 31/79 (39%)

Query: 56  HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
             +        G   +  +E           +G+++  NV++  + +++  T R + A  
Sbjct: 234 QANNLYNFSATGSTVADNMEVPGVNGTGKIQTGVLEQSNVDLTDQFSNLITTQRSFQAGS 293

Query: 116 QTIKQSHDMMTTTLDLLRD 134
           + I  S  ++   ++L R 
Sbjct: 294 RLITVSDSVLEDIVNLKRS 312


>gi|242308880|ref|ZP_04808035.1| flagellar hook-protein FlgK [Helicobacter pullorum MIT 98-5489]
 gi|239524544|gb|EEQ64410.1| flagellar hook-protein FlgK [Helicobacter pullorum MIT 98-5489]
          Length = 609

 Score = 46.0 bits (107), Expect = 0.002,   Method: Composition-based stats.
 Identities = 9/47 (19%), Positives = 18/47 (38%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
                    V+V  E  ++ +    Y AN + +    +M+ T L + 
Sbjct: 562 KQEYKAISEVSVDDELVNLIKYQSGYSANAKMVSTIDEMLNTLLGIK 608



 Score = 37.9 bits (86), Expect = 0.50,   Method: Composition-based stats.
 Identities = 12/38 (31%), Positives = 18/38 (47%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDT 38
          M  L++S +   +GL      +  +S NIANA     T
Sbjct: 1  MGGLLSSLNTPYTGLTGHQVMVDTVSNNIANANNEFYT 38


>gi|163750570|ref|ZP_02157808.1| flagellar hook protein [Shewanella benthica KT99]
 gi|161329725|gb|EDQ00714.1| flagellar hook protein [Shewanella benthica KT99]
          Length = 455

 Score = 46.0 bits (107), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/113 (15%), Positives = 45/113 (39%), Gaps = 1/113 (0%)

Query: 20  ARMQIISENIANAR-TTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFD 78
             +++ ++ + NA  + G T           + E+ +   G    K           E +
Sbjct: 342 TNVEVGADGLINASYSNGTTVALARVALARFANEQGLTQVGNTSWKASQDSGQALAGEAN 401

Query: 79  PGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G   +  S  ++  NV++  +  ++    R + A+ +T++ ++ +  T L +
Sbjct: 402 SGTFGSIRSSALEQSNVDLTTQLVNLISAQRNFQASSRTLEVNNTLQQTILQI 454



 Score = 39.1 bits (89), Expect = 0.22,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 17/39 (43%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          S +IA SG+A     +   + NIAN  + G       + 
Sbjct: 2  SFNIALSGIAAAQKDLNTTANNIANVNSIGFKESRAEFA 40


>gi|32477363|ref|NP_870357.1| FlgF [Rhodopirellula baltica SH 1]
 gi|32447914|emb|CAD77434.1| FlgF [Rhodopirellula baltica SH 1]
 gi|327537336|gb|EGF24069.1| Flagellar basal-body rod FlgF [Rhodopirellula baltica WH47]
          Length = 273

 Score = 46.0 bits (107), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 24/51 (47%)

Query: 79  PGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
           P       +G ++   V+      +M ET+R Y AN+Q IK    ++ + +
Sbjct: 217 PDSDRNVVAGSLEQSAVSPTGTMMEMIETSRAYEANIQMIKNQDSVLGSLI 267



 Score = 35.2 bits (79), Expect = 2.9,   Method: Composition-based stats.
 Identities = 17/78 (21%), Positives = 26/78 (33%)

Query: 11  ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQ 70
           + +G   Q+ R+Q IS N+AN  T G  P     + +     E      G+         
Sbjct: 31  SAAGAQAQNHRLQQISHNLANVDTPGFKPSQTILQARFSELIEEGMVPPGLGGADDIGGG 90

Query: 71  STFVEEFDPGHPVANASG 88
            T   E       A  + 
Sbjct: 91  VTIQPEQTQFGVGAIRTT 108


>gi|163939559|ref|YP_001644443.1| flagellar hook protein FlgE [Bacillus weihenstephanensis KBAB4]
 gi|163861756|gb|ABY42815.1| protein of unknown function DUF1078 domain protein [Bacillus
           weihenstephanensis KBAB4]
          Length = 407

 Score = 46.0 bits (107), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 24/43 (55%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV++ VE  D+    R +  N + IK S +++   ++L+R
Sbjct: 365 EGANVDLSVEFVDLMLYQRGFQGNAKVIKISDEVLNEVVNLIR 407



 Score = 38.7 bits (88), Expect = 0.25,   Method: Composition-based stats.
 Identities = 13/69 (18%), Positives = 30/69 (43%), Gaps = 6/69 (8%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I + + + +G+      + + S NIANA+T G        ++K +  + + + S G + 
Sbjct: 1  MIKALYTSITGMNATQNALSVTSNNIANAQTVG------YKKQKAMFDDLLYNNSIGAKG 54

Query: 64 KKIGVDQST 72
                 + 
Sbjct: 55 DGKYAGTNP 63


>gi|229096239|ref|ZP_04227212.1| Flagellar hook protein flgE [Bacillus cereus Rock3-29]
 gi|228687199|gb|EEL41104.1| Flagellar hook protein flgE [Bacillus cereus Rock3-29]
          Length = 407

 Score = 46.0 bits (107), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 24/43 (55%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV++ +E  D+    R +  N + IK S +++   ++L+R
Sbjct: 365 EGANVDLSIEFVDLMLYQRGFQGNAKVIKVSDEVLNEVVNLIR 407



 Score = 38.3 bits (87), Expect = 0.32,   Method: Composition-based stats.
 Identities = 13/69 (18%), Positives = 30/69 (43%), Gaps = 6/69 (8%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I + + + +G+      + + S NIANA+T G        ++K +  + + + S G + 
Sbjct: 1  MIKALYTSITGMNATQNALSVTSNNIANAQTVG------YKKQKAMFDDLLYNNSIGAKS 54

Query: 64 KKIGVDQST 72
                 + 
Sbjct: 55 DGKYAGTNP 63


>gi|163784308|ref|ZP_02179218.1| hypothetical protein HG1285_04693 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159880426|gb|EDP74020.1| hypothetical protein HG1285_04693 [Hydrogenivirga sp. 128-5-R1-1]
          Length = 200

 Score = 46.0 bits (107), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 19/41 (46%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I +   + +G+  Q   + +IS NIAN  T G       +
Sbjct: 1  MIRALWTSATGMEAQQTNLDVISNNIANVNTVGFKKSRANF 41


>gi|163793271|ref|ZP_02187246.1| flagellar basal body FlaE domain protein [alpha proteobacterium
           BAL199]
 gi|159181073|gb|EDP65588.1| flagellar basal body FlaE domain protein [alpha proteobacterium
           BAL199]
          Length = 433

 Score = 46.0 bits (107), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/131 (15%), Positives = 40/131 (30%), Gaps = 5/131 (3%)

Query: 4   LIASAHIANSGLAV-QSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
           L+     + S L   +     +++    N  T             T+     +    G  
Sbjct: 307 LLNQNGSSPSALTAVEIDNEGVVTARFKNGDTRP----IYKIAIGTVPAATELRSENGNA 362

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
            K         + E       A  S  ++   V++  E  D+  T R Y A  + I    
Sbjct: 363 YKLSSRSGDLLLTEAGLQGAGAIESSALEQSTVDLSDEFTDLIITQRAYSAATKLITTGD 422

Query: 123 DMMTTTLDLLR 133
           +++   + + R
Sbjct: 423 ELLDEIIRVKR 433



 Score = 37.9 bits (86), Expect = 0.43,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 23/64 (35%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            +        S LA QS    IIS+NIAN  T G    +  ++            S G 
Sbjct: 1  MSIYGGMFSGVSALAAQSQAFGIISDNIANVNTIGYKDTTARFQTLVTESSSSSRYSPGG 60

Query: 62 RVKK 65
           + +
Sbjct: 61 VLAR 64


>gi|118589943|ref|ZP_01547347.1| flagellar basal body rod protein [Stappia aggregata IAM 12614]
 gi|118437440|gb|EAV44077.1| flagellar basal body rod protein [Stappia aggregata IAM 12614]
          Length = 243

 Score = 46.0 bits (107), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/77 (15%), Positives = 25/77 (32%)

Query: 54  VMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
           +   +   R +   V     V             G V+  N+N + E   M   +R + +
Sbjct: 161 IPDDAQLTRAENSAVIPDKPVIPVQTYDTNGVRQGYVEGSNINPVREMTKMIMISRAFES 220

Query: 114 NLQTIKQSHDMMTTTLD 130
             + I  S++     + 
Sbjct: 221 ATKMIDTSNESQEKAIR 237



 Score = 34.5 bits (77), Expect = 5.3,   Method: Composition-based stats.
 Identities = 12/76 (15%), Positives = 27/76 (35%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          + ++ ++A S     S R++ ++ N+AN  T G       +        +          
Sbjct: 1  MESALYVALSAQVALSNRLETVARNVANMNTAGYRADEVKFAELVSKAGQDKVSFSTGGE 60

Query: 64 KKIGVDQSTFVEEFDP 79
          K I     +  +  +P
Sbjct: 61 KYISRQYGSLNKTDNP 76


>gi|262364765|gb|ACY61322.1| flagellar hook protein [Yersinia pestis D182038]
          Length = 104

 Score = 46.0 bits (107), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 21/47 (44%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
            SG ++  NV++  E   +    R Y A+ + I  +  MM     +L
Sbjct: 58  ESGALENSNVDITAELVGLMTAQRNYQASTKIISTNDSMMNALFQVL 104


>gi|330818585|ref|YP_004362290.1| flagellar hook protein FlgE [Burkholderia gladioli BSR3]
 gi|327370978|gb|AEA62334.1| flagellar hook protein FlgE [Burkholderia gladioli BSR3]
          Length = 414

 Score = 46.0 bits (107), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/83 (16%), Positives = 28/83 (33%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +  + +   GG +  +        V      +         +    ++  E  ++    
Sbjct: 332 FNNPQGLTSIGGNQYIQTSASGVPQVGVPGSTNHGTLKGSTTEASTTDLTGELVNLITAQ 391

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y AN QTIK    +  T ++L
Sbjct: 392 RDYQANAQTIKTQQAVDQTLINL 414


>gi|317130722|ref|YP_004097004.1| flagellar hook-basal body protein [Bacillus cellulosilyticus DSM
           2522]
 gi|315475670|gb|ADU32273.1| flagellar hook-basal body protein [Bacillus cellulosilyticus DSM
           2522]
          Length = 279

 Score = 46.0 bits (107), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 23/46 (50%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           + G+++  NV++  E  +M  T R Y  N + I  + +MM     +
Sbjct: 233 SQGMLEQSNVDMGREMTEMMLTQRNYQFNSRAISIADEMMGLVNTI 278


>gi|229132566|ref|ZP_04261415.1| Flagellar hook protein flgE [Bacillus cereus BDRD-ST196]
 gi|228650912|gb|EEL06898.1| Flagellar hook protein flgE [Bacillus cereus BDRD-ST196]
          Length = 407

 Score = 46.0 bits (107), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 24/43 (55%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV++ VE  D+    R +  N + IK S +++   ++L+R
Sbjct: 365 EGANVDLSVEFVDLMLYQRGFQGNAKVIKISDEVLNEVVNLIR 407



 Score = 38.3 bits (87), Expect = 0.33,   Method: Composition-based stats.
 Identities = 13/69 (18%), Positives = 30/69 (43%), Gaps = 6/69 (8%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I + + + +G+      + + S NIANA+T G        ++K +  + + + S G + 
Sbjct: 1  MIKALYTSITGMNATQNALSVTSNNIANAQTVG------YKKQKAMFDDLLYNNSIGSKG 54

Query: 64 KKIGVDQST 72
                 + 
Sbjct: 55 DDKYAGTNP 63


>gi|226327743|ref|ZP_03803261.1| hypothetical protein PROPEN_01616 [Proteus penneri ATCC 35198]
 gi|225203447|gb|EEG85801.1| hypothetical protein PROPEN_01616 [Proteus penneri ATCC 35198]
          Length = 153

 Score = 46.0 bits (107), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/41 (36%), Positives = 20/41 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I S  IA +GL  Q   M +IS N+AN  T G       +
Sbjct: 1  MIRSLWIAKTGLDAQQTNMDVISNNLANVSTNGFKRQRAVF 41


>gi|206974982|ref|ZP_03235897.1| flagellar hook protein FlgE [Bacillus cereus H3081.97]
 gi|206747001|gb|EDZ58393.1| flagellar hook protein FlgE [Bacillus cereus H3081.97]
          Length = 407

 Score = 46.0 bits (107), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 24/43 (55%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV++ VE  D+    R +  N + IK S +++   ++L+R
Sbjct: 365 EGANVDLSVEFVDLMLYQRGFQGNAKVIKISDEVLNEVVNLIR 407



 Score = 38.3 bits (87), Expect = 0.37,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 19/39 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSD 42
          +I + + + +G+      + + S NIANA+T G      
Sbjct: 1  MIKALYTSITGMNATQNALSVTSNNIANAQTVGYKKQKA 39


>gi|261420740|ref|YP_003254422.1| fagellar hook-basal body protein [Geobacillus sp. Y412MC61]
 gi|319768410|ref|YP_004133911.1| flagellar hook-basal body protein [Geobacillus sp. Y412MC52]
 gi|261377197|gb|ACX79940.1| fagellar hook-basal body protein [Geobacillus sp. Y412MC61]
 gi|317113276|gb|ADU95768.1| flagellar hook-basal body protein [Geobacillus sp. Y412MC52]
          Length = 273

 Score = 46.0 bits (107), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/106 (16%), Positives = 36/106 (33%), Gaps = 1/106 (0%)

Query: 29  IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASG 88
           +      G            I   +++   GG       V  +      +    ++   G
Sbjct: 168 LTATNADGRVVARVNLGVTVIRRPQLLEARGGNVYALPNVPGAAEELNGNLRGQISVKQG 227

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
            ++  NV++  E   +  T+R Y  N + I  S  M+   ++ +R 
Sbjct: 228 ALEQSNVDLGEEMVGLMATSRAYQLNARAISISEQMLG-LINGMRS 272



 Score = 36.8 bits (83), Expect = 1.2,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 21/59 (35%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
          ++ S   A + +     R+  IS NIAN+ T G       +        + +      R
Sbjct: 1  MLRSMLTAANTMNALQERLDTISHNIANSNTVGFKRREASFAELLTQQIDRLPNDEAPR 59


>gi|229166594|ref|ZP_04294346.1| Flagellar hook protein flgE [Bacillus cereus AH621]
 gi|228616848|gb|EEK73921.1| Flagellar hook protein flgE [Bacillus cereus AH621]
          Length = 407

 Score = 46.0 bits (107), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 24/43 (55%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV++ VE  D+    R +  N + IK S +++   ++L+R
Sbjct: 365 EGANVDLSVEFVDLMLYQRGFQGNAKVIKISDEVLNEVVNLIR 407



 Score = 38.7 bits (88), Expect = 0.27,   Method: Composition-based stats.
 Identities = 13/69 (18%), Positives = 30/69 (43%), Gaps = 6/69 (8%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I + + + +G+      + + S NIANA+T G        ++K +  + + + S G + 
Sbjct: 1  MIKALYTSITGMNATQNALSVTSNNIANAQTVG------YKKQKAMFDDLLYNNSIGAKG 54

Query: 64 KKIGVDQST 72
                 + 
Sbjct: 55 DGKYAGTNP 63


>gi|229109210|ref|ZP_04238809.1| Flagellar hook protein flgE [Bacillus cereus Rock1-15]
 gi|228674220|gb|EEL29465.1| Flagellar hook protein flgE [Bacillus cereus Rock1-15]
          Length = 406

 Score = 46.0 bits (107), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 24/43 (55%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV++ VE  D+    R +  N + IK S +++   ++L+R
Sbjct: 364 EGANVDLSVEFVDLMLYQRGFQGNAKVIKVSDEVLNEVVNLIR 406



 Score = 38.3 bits (87), Expect = 0.39,   Method: Composition-based stats.
 Identities = 13/69 (18%), Positives = 30/69 (43%), Gaps = 6/69 (8%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I + + + +G+      + + S NIANA+T G        ++K +  + + + S G + 
Sbjct: 1  MIKALYTSITGMNATQNALSVTSNNIANAQTVG------YKKQKAMFDDLLYNNSIGAKA 54

Query: 64 KKIGVDQST 72
                 + 
Sbjct: 55 DDKYAGTNP 63


>gi|167568107|ref|ZP_02361023.1| flagellar hook protein FlgE [Burkholderia oklahomensis EO147]
 gi|167574225|ref|ZP_02367099.1| flagellar hook protein FlgE [Burkholderia oklahomensis C6786]
          Length = 413

 Score = 46.0 bits (107), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/83 (15%), Positives = 28/83 (33%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +    +   G  +  +        +      +        ++  NV++  +   +    
Sbjct: 331 FNNPNGLVSVGNNQYVETAASGVPQISAPGSTNHGTLQGSALENSNVDLTSQLVKLITAQ 390

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y AN QTIK    +  T ++L
Sbjct: 391 RNYQANAQTIKTQQTVDQTLINL 413


>gi|229017042|ref|ZP_04173962.1| Flagellar hook protein flgE [Bacillus cereus AH1273]
 gi|229023223|ref|ZP_04179734.1| Flagellar hook protein flgE [Bacillus cereus AH1272]
 gi|228738148|gb|EEL88633.1| Flagellar hook protein flgE [Bacillus cereus AH1272]
 gi|228744313|gb|EEL94395.1| Flagellar hook protein flgE [Bacillus cereus AH1273]
          Length = 407

 Score = 46.0 bits (107), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 25/43 (58%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV++ VE  D+    R +  N + IK S +++T  ++L+R
Sbjct: 365 EGANVDLSVEFVDLMLYQRGFQGNAKVIKISDEVLTEVVNLIR 407



 Score = 38.7 bits (88), Expect = 0.27,   Method: Composition-based stats.
 Identities = 17/102 (16%), Positives = 39/102 (38%), Gaps = 11/102 (10%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +I + + + +GL      + + S NIANA+T G        ++K +  + + + S G + 
Sbjct: 1   MIKALYTSITGLNATQNALSVTSNNIANAQTVG------YKKQKAMFDDLLYNNSIGAKG 54

Query: 64  KKIGVDQST-----FVEEFDPGHPVANASGIVKYPNVNVLVE 100
                  +       V+        ++ +  +    V   +E
Sbjct: 55  DDRYAGTNPKSIGNGVKMSGTVTDYSDGTITLTGGKVQAAME 96


>gi|167750705|ref|ZP_02422832.1| hypothetical protein EUBSIR_01683 [Eubacterium siraeum DSM 15702]
 gi|167656384|gb|EDS00514.1| hypothetical protein EUBSIR_01683 [Eubacterium siraeum DSM 15702]
 gi|291532044|emb|CBK97629.1| fagellar hook-basal body proteins [Eubacterium siraeum 70/3]
 gi|291558218|emb|CBL35335.1| fagellar hook-basal body proteins [Eubacterium siraeum V10Sc8a]
          Length = 242

 Score = 46.0 bits (107), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/96 (11%), Positives = 32/96 (33%), Gaps = 1/96 (1%)

Query: 37  DTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGI-VKYPNV 95
            T   D      +        + G+ +       +T            +   + ++  N 
Sbjct: 145 GTSKPDYEALTKMIGVYTFDNNFGLELLGSNKMTATERSGEAVADRSIDKIRMALERSNT 204

Query: 96  NVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           ++  +   + ET R Y  + + ++ + ++   T +L
Sbjct: 205 DIAGDMVRIIETQRSYQMSARVVQTADELERITNNL 240



 Score = 35.2 bits (79), Expect = 3.1,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 17/42 (40%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          +  + +   +GL  Q   + + S NIAN  T G       + 
Sbjct: 1  MNIAFYTGKTGLIAQQEGLNVYSNNIANVNTVGFKASRPSFA 42


>gi|313672183|ref|YP_004050294.1| flagellar hook-associated protein flgk [Calditerrivibrio
           nitroreducens DSM 19672]
 gi|312938939|gb|ADR18131.1| flagellar hook-associated protein FlgK [Calditerrivibrio
           nitroreducens DSM 19672]
          Length = 582

 Score = 46.0 bits (107), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/88 (17%), Positives = 32/88 (36%), Gaps = 2/88 (2%)

Query: 45  RRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDP--GHPVANASGIVKYPNVNVLVETA 102
           + K +S    +       V  IG D++     +D            + +   V++  E  
Sbjct: 488 KYKPLSNNVTIDEFYTTFVSLIGSDKAQVDTFYDTKKNVVQELKLKLDQIQGVSMDEEYT 547

Query: 103 DMRETNRLYMANLQTIKQSHDMMTTTLD 130
           +M +  + Y AN + I     M+   ++
Sbjct: 548 NMIKFQKAYEANARFITAVDQMIDKLIN 575



 Score = 37.2 bits (84), Expect = 0.76,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 23/68 (33%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  +    H   SGL V  + + +   NIAN  T G +        ++           G
Sbjct: 1  MANIFGILHTGVSGLYVAQSGIDVTGHNIANLNTEGYSRQRVIITTESPLNVRPGPFGRG 60

Query: 61 VRVKKIGV 68
           ++  +  
Sbjct: 61 AKLDAVVR 68


>gi|224417868|ref|ZP_03655874.1| flagellar hook-associated protein FlgK [Helicobacter canadensis MIT
           98-5491]
 gi|253827207|ref|ZP_04870092.1| flagellar hook-associated protein [Helicobacter canadensis MIT
           98-5491]
 gi|313141411|ref|ZP_07803604.1| flagellar hook-protein FlgK [Helicobacter canadensis MIT 98-5491]
 gi|253510613|gb|EES89272.1| flagellar hook-associated protein [Helicobacter canadensis MIT
           98-5491]
 gi|313130442|gb|EFR48059.1| flagellar hook-protein FlgK [Helicobacter canadensis MIT 98-5491]
          Length = 609

 Score = 46.0 bits (107), Expect = 0.002,   Method: Composition-based stats.
 Identities = 9/47 (19%), Positives = 18/47 (38%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
                    V+V  E  ++ +    Y AN + +    +M+ T L + 
Sbjct: 562 KQEYKAISEVSVDDELINLIKYQSGYSANAKMVSTIDEMLNTLLGIK 608



 Score = 40.2 bits (92), Expect = 0.087,   Method: Composition-based stats.
 Identities = 15/93 (16%), Positives = 29/93 (31%), Gaps = 1/93 (1%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  L++S +   +GL      +  +S NIANA     +             +   +   G
Sbjct: 1  MGGLLSSLNTPYTGLTGHQVMVDTVSNNIANANNEFYSR-QVVRSSAQTPLQTSSNYVIG 59

Query: 61 VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
            +  I V++      F      +      +  
Sbjct: 60 QGLNIISVERVHDEYTFSRYKKASMEKTYYEKS 92


>gi|114562348|ref|YP_749861.1| flagellar hook-associated protein FlgK [Shewanella frigidimarina
           NCIMB 400]
 gi|114333641|gb|ABI71023.1| flagellar hook-associated protein FlgK [Shewanella frigidimarina
           NCIMB 400]
          Length = 642

 Score = 46.0 bits (107), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/101 (18%), Positives = 32/101 (31%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           I   +IA +G+    A++ + S NIANA T G                       G  V 
Sbjct: 3   IDLLNIARTGVQASQAQLGVTSNNIANANTEGYNRQVATQSSLESQRLGNSFYGTGTYVS 62

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
            +    + F          + ++    Y  ++ L E     
Sbjct: 63  DVKRVYNEFAARELRIGQTSMSAAETSYSKLSELDEIYSQI 103


>gi|323697471|ref|ZP_08109383.1| fagellar hook-basal body protein [Desulfovibrio sp. ND132]
 gi|323457403|gb|EGB13268.1| fagellar hook-basal body protein [Desulfovibrio desulfuricans
           ND132]
          Length = 258

 Score = 46.0 bits (107), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 25/59 (42%)

Query: 72  TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
                  P   V+ A G ++  NV V+ E   M ET R +    + I+   D+ +  ++
Sbjct: 193 PTGGAQIPPQDVSVAQGFIEKSNVEVVTEMVSMIETQRAFTMYTKMIQGDSDLDSKLIN 251


>gi|297531534|ref|YP_003672809.1| fagellar hook-basal body protein [Geobacillus sp. C56-T3]
 gi|297254786|gb|ADI28232.1| fagellar hook-basal body protein [Geobacillus sp. C56-T3]
          Length = 273

 Score = 46.0 bits (107), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/106 (16%), Positives = 36/106 (33%), Gaps = 1/106 (0%)

Query: 29  IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASG 88
           +      G            I   +++   GG       V  +      +    ++   G
Sbjct: 168 LTATNADGRVVARVNLGVTVIRRPQLLEARGGNVYALPNVPGAAEELNGNLRGQISVKQG 227

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
            ++  NV++  E   +  T+R Y  N + I  S  M+   ++ +R 
Sbjct: 228 ALEQSNVDLGEEMVGLMATSRAYQLNARAISISEQMLG-LINGMRS 272



 Score = 36.8 bits (83), Expect = 1.2,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 21/59 (35%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
          ++ S   A + +     R+  IS NIAN+ T G       +        + +      R
Sbjct: 1  MLRSMLTAANTMNALQERLDTISHNIANSNTVGFKRREASFAELLTQQIDRLPNDEAPR 59


>gi|229195966|ref|ZP_04322719.1| Flagellar hook protein flgE [Bacillus cereus m1293]
 gi|228587525|gb|EEK45590.1| Flagellar hook protein flgE [Bacillus cereus m1293]
          Length = 407

 Score = 46.0 bits (107), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 24/43 (55%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV++ VE  D+    R +  N + IK S +++   ++L+R
Sbjct: 365 EGANVDLSVEFVDLMLYQRGFQGNAKVIKISDEVLNEVVNLIR 407



 Score = 38.3 bits (87), Expect = 0.39,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 19/39 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSD 42
          +I + + + +G+      + + S NIANA+T G      
Sbjct: 1  MIKALYTSITGMNATQNALSVTSNNIANAQTVGYKKQKA 39


>gi|258512707|ref|YP_003186141.1| flagellar basal body rod protein [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
 gi|257479433|gb|ACV59752.1| flagellar basal body rod protein [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
          Length = 403

 Score = 45.6 bits (106), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/87 (20%), Positives = 28/87 (32%), Gaps = 1/87 (1%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
             +    +   G       G  Q+  VE            G ++  NVNV    A M + 
Sbjct: 313 VDADVTQLQPLGEGEYMVGGSYQAAAVEPLLRASTGRMVFGALESSNVNVAATMAQMMQA 372

Query: 108 NRLYMANLQTIKQSHDMMT-TTLDLLR 133
              Y AN +  +    M+     D+ R
Sbjct: 373 LNAYEANQRVAQSVDSMLNVAATDIGR 399


>gi|332533174|ref|ZP_08409043.1| flagellar basal-body rod protein FlgF [Pseudoalteromonas
           haloplanktis ANT/505]
 gi|332037456|gb|EGI73910.1| flagellar basal-body rod protein FlgF [Pseudoalteromonas
           haloplanktis ANT/505]
          Length = 244

 Score = 45.6 bits (106), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 21/44 (47%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  NVN + E  DM    R +   ++ +K + ++      LLR
Sbjct: 199 LEMSNVNPVHEMVDMISHQRQFELQVKLMKTAEEIDERQDQLLR 242


>gi|254292906|ref|YP_003058929.1| flagellar basal-body rod protein FlgF [Hirschia baltica ATCC 49814]
 gi|254041437|gb|ACT58232.1| flagellar basal-body rod protein FlgF [Hirschia baltica ATCC 49814]
          Length = 255

 Score = 45.6 bits (106), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/44 (31%), Positives = 23/44 (52%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            G V+  NV+ +VE   M E +R Y +  + I  S+DM    ++
Sbjct: 206 QGFVESSNVSAIVEMTQMIEISRAYQSVAKLISNSNDMREKAIN 249


>gi|229917022|ref|YP_002885668.1| hypothetical protein EAT1b_1296 [Exiguobacterium sp. AT1b]
 gi|229468451|gb|ACQ70223.1| protein of unknown function DUF1078 domain protein [Exiguobacterium
           sp. AT1b]
          Length = 260

 Score = 45.6 bits (106), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/37 (32%), Positives = 18/37 (48%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           ++  NV++  E  DM  T R Y  N + +  S  MM 
Sbjct: 217 LESSNVDLTKEMTDMTITQRAYQMNSRAMSMSDQMMG 253


>gi|42780846|ref|NP_978093.1| flagellar hook protein FlgE [Bacillus cereus ATCC 10987]
 gi|42736766|gb|AAS40701.1| flagellar hook protein FlgE, putative [Bacillus cereus ATCC 10987]
          Length = 407

 Score = 45.6 bits (106), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 24/43 (55%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV++ VE  D+    R +  N + IK S +++   ++L+R
Sbjct: 365 EGANVDLSVEFVDLMLYQRGFQGNAKVIKISDEVLNEVVNLIR 407



 Score = 38.3 bits (87), Expect = 0.39,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 19/39 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSD 42
          +I + + + +G+      + + S NIANA+T G      
Sbjct: 1  MIKALYTSITGMNATQNALSVTSNNIANAQTVGYKKQKA 39


>gi|254699461|ref|ZP_05161289.1| flagellar basal body rod protein FlgG [Brucella suis bv. 5 str.
          513]
 gi|261749912|ref|ZP_05993621.1| predicted protein [Brucella suis bv. 5 str. 513]
 gi|261739665|gb|EEY27591.1| predicted protein [Brucella suis bv. 5 str. 513]
          Length = 77

 Score = 45.6 bits (106), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 29/75 (38%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          + +  IA +G+  Q   +++I+ NIAN  TTG       +       E     + G  +K
Sbjct: 1  MKALTIAATGMNAQQLNLEVIANNIANINTTGFKRARAEFTDLLYQSERTADFAEGKHIK 60

Query: 65 KIGVDQSTFVEEFDP 79
                +  V    P
Sbjct: 61 VSIDPHARTVVLNQP 75


>gi|254496887|ref|ZP_05109735.1| flagellar hook protein FlgE [Legionella drancourtii LLAP12]
 gi|254353906|gb|EET12593.1| flagellar hook protein FlgE [Legionella drancourtii LLAP12]
          Length = 437

 Score = 45.6 bits (106), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 22/42 (52%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           ++  NV++  E  D+    R + AN QTI+    +  T +++
Sbjct: 395 LEESNVDITSELVDLIGAQRDFQANAQTIRAGDTITQTIINI 436


>gi|224370754|ref|YP_002604918.1| putative flagellar hook-associated protein [Desulfobacterium
           autotrophicum HRM2]
 gi|223693471|gb|ACN16754.1| putative flagellar hook-associated protein [Desulfobacterium
           autotrophicum HRM2]
          Length = 1268

 Score = 45.6 bits (106), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/100 (17%), Positives = 35/100 (35%), Gaps = 1/100 (1%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M  + ++ +IA   +A Q   + +   NIAN      +      +  T +         G
Sbjct: 1   MAGISSTLNIAQGAIAAQQYGLNVTGNNIANVNNPDYSLQVADQKSNTPASYSGFLFGTG 60

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVE 100
           V V +I    +    E       ++ +   +  +   +VE
Sbjct: 61  VSVDQIQQRVNQL-LENRLTDAKSSQAAFEEAESYLSVVE 99



 Score = 40.2 bits (92), Expect = 0.090,   Method: Composition-based stats.
 Identities = 7/39 (17%), Positives = 18/39 (46%)

Query: 93   PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
              V++  E  ++ +    + A  + +  S +M+ T L +
Sbjct: 1229 SAVSLDEEMINLIKYQHAFGAASKLVTVSDEMLNTLLGM 1267


>gi|148259130|ref|YP_001233257.1| flagellar hook protein FlgE [Acidiphilium cryptum JF-5]
 gi|146400811|gb|ABQ29338.1| flagellar basal body FlaE domain protein [Acidiphilium cryptum
           JF-5]
          Length = 425

 Score = 45.6 bits (106), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/106 (16%), Positives = 42/106 (39%), Gaps = 1/106 (0%)

Query: 28  NIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANAS 87
           NI    T G +         + +  + +    G          +  +     G   A  +
Sbjct: 321 NITANYTNGFSKQIAQIPLASFASPDALQNKSGQIETATQASGAATINAVG-GSGGALVT 379

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G V+  NV++  +  D+    + Y AN + +  +  ++TTT+++++
Sbjct: 380 GSVENSNVDIATQFTDLINAQQAYTANTKVVTAAQQILTTTVNMVQ 425



 Score = 35.6 bits (80), Expect = 2.3,   Method: Composition-based stats.
 Identities = 13/37 (35%), Positives = 20/37 (54%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDT 38
            +  +   + SGL  QS+    IS+NIAN++T G  
Sbjct: 1  MSIFGALDTSVSGLQAQSSAFTNISDNIANSQTIGYK 37


>gi|187778771|ref|ZP_02995244.1| hypothetical protein CLOSPO_02366 [Clostridium sporogenes ATCC
           15579]
 gi|187772396|gb|EDU36198.1| hypothetical protein CLOSPO_02366 [Clostridium sporogenes ATCC
           15579]
          Length = 255

 Score = 45.6 bits (106), Expect = 0.002,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 21/45 (46%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
               ++  NVNV  E  +M  T R +  N + ++   + +  T++
Sbjct: 205 RQNSLEKSNVNVTNEMVNMLTTMRSFETNQKMVQAIDETLGKTVN 249



 Score = 34.1 bits (76), Expect = 6.1,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 27/64 (42%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I S + A SG+    A+   IS N++NA T G    +  +++      E      G + 
Sbjct: 1  MIRSLYTAVSGMISLEAKQDTISSNLSNASTVGYKSTNLAFKKFEDVLMENYDKKLGNKN 60

Query: 64 KKIG 67
           K  
Sbjct: 61 IKNV 64


>gi|217959237|ref|YP_002337785.1| flagellar hook protein FlgE [Bacillus cereus AH187]
 gi|229138454|ref|ZP_04267043.1| Flagellar hook protein flgE [Bacillus cereus BDRD-ST26]
 gi|217065278|gb|ACJ79528.1| flagellar hook protein [Bacillus cereus AH187]
 gi|228644991|gb|EEL01234.1| Flagellar hook protein flgE [Bacillus cereus BDRD-ST26]
          Length = 407

 Score = 45.6 bits (106), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 24/43 (55%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV++ VE  D+    R +  N + IK S +++   ++L+R
Sbjct: 365 EGANVDLSVEFVDLMLYQRGFQGNAKVIKISDEVLNEVVNLIR 407



 Score = 37.9 bits (86), Expect = 0.42,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 19/39 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSD 42
          +I + + + +G+      + + S NIANA+T G      
Sbjct: 1  MIKALYTSITGMNATQNALSVTSNNIANAQTVGYKKQKA 39


>gi|77359723|ref|YP_339298.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
           [Pseudoalteromonas haloplanktis TAC125]
 gi|76874634|emb|CAI85855.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
           [Pseudoalteromonas haloplanktis TAC125]
          Length = 247

 Score = 45.6 bits (106), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 27/61 (44%)

Query: 73  FVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
             +  +    V   SG ++  NVN + E  DM    R +   ++ +K + ++  +   LL
Sbjct: 185 PNQTVETSANVQVISGALEMSNVNPVHEMVDMISHQRQFELQVKLMKTAEEIDQSQDQLL 244

Query: 133 R 133
           R
Sbjct: 245 R 245


>gi|296452609|ref|ZP_06894303.1| flagellar hook-associated protein FlgK [Clostridium difficile
           NAP08]
 gi|296880979|ref|ZP_06904925.1| flagellar hook-associated protein FlgK [Clostridium difficile
           NAP07]
 gi|296258570|gb|EFH05471.1| flagellar hook-associated protein FlgK [Clostridium difficile
           NAP08]
 gi|296428000|gb|EFH13901.1| flagellar hook-associated protein FlgK [Clostridium difficile
           NAP07]
          Length = 436

 Score = 45.6 bits (106), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/107 (20%), Positives = 38/107 (35%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M  L +  + ANSG+      +Q IS NI+N  T G +     +   +  +   +  S G
Sbjct: 1   MAGLFSILNTANSGMNSHQKAIQTISHNISNLDTEGYSRQRTEFATNSPMYMPSLSNSIG 60

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                 GV  +      +  +     +   KY       +  +  ET
Sbjct: 61  RGQLGTGVHVTDVTRARNSFYDYQFRAEAHKYGKTVSKYDYYNTIET 107



 Score = 42.9 bits (99), Expect = 0.013,   Method: Composition-based stats.
 Identities = 5/38 (13%), Positives = 18/38 (47%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             V++  E  ++ +  R Y A+ + +  +  ++   ++
Sbjct: 396 SGVSLDEEMTELIKIQRSYQASAKVMSTAVQLLDVVIN 433


>gi|237810461|ref|YP_002894912.1| flagellar hook protein FlgE [Burkholderia pseudomallei MSHR346]
 gi|237503327|gb|ACQ95645.1| flagellar hook protein FlgE [Burkholderia pseudomallei MSHR346]
          Length = 413

 Score = 45.6 bits (106), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/83 (15%), Positives = 28/83 (33%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +    +   G  +  +        +      +        ++  NV++  +   +    
Sbjct: 331 FNNPNGLVNVGNNQYVESAASGVPQISAPGSTNHGTLQGSALENSNVDLTSQLVKLITAQ 390

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y AN QTIK    +  T ++L
Sbjct: 391 RNYQANAQTIKTQQTVDQTLINL 413


>gi|326402284|ref|YP_004282365.1| flagellar hook protein FlgE [Acidiphilium multivorum AIU301]
 gi|325049145|dbj|BAJ79483.1| flagellar hook protein FlgE [Acidiphilium multivorum AIU301]
          Length = 425

 Score = 45.6 bits (106), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/106 (16%), Positives = 42/106 (39%), Gaps = 1/106 (0%)

Query: 28  NIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANAS 87
           NI    T G +         + +  + +    G          +  +     G   A  +
Sbjct: 321 NITANYTNGFSKQIAQIPLASFASPDALQNKSGQIETATQASGAATINAVG-GSGGALVT 379

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G V+  NV++  +  D+    + Y AN + +  +  ++TTT+++++
Sbjct: 380 GSVENSNVDIATQFTDLINAQQAYTANTKVVTAAQQILTTTVNMVQ 425



 Score = 35.6 bits (80), Expect = 2.4,   Method: Composition-based stats.
 Identities = 13/37 (35%), Positives = 20/37 (54%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDT 38
            +  +   + SGL  QS+    IS+NIAN++T G  
Sbjct: 1  MSIFGALDTSVSGLQAQSSAFTNISDNIANSQTIGYK 37


>gi|312882659|ref|ZP_07742396.1| flagellar hook protein FlgE [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309369620|gb|EFP97135.1| flagellar hook protein FlgE [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 435

 Score = 45.6 bits (106), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/84 (16%), Positives = 33/84 (39%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
            ++ E+ +   GG +             E + G      SG ++  N+++  E  D+ + 
Sbjct: 351 RVANEQGLDKKGGTQWDATQFSGDKIWGESNKGSFGTIRSGTLEQANIDMTQELVDLIQA 410

Query: 108 NRLYMANLQTIKQSHDMMTTTLDL 131
            R + AN + ++  +      L +
Sbjct: 411 QRNFQANSRALEVHNTTQQNILQI 434



 Score = 39.9 bits (91), Expect = 0.12,   Method: Composition-based stats.
 Identities = 12/36 (33%), Positives = 16/36 (44%)

Query: 10 IANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          I+ SGL+     +   S NIANA T G       + 
Sbjct: 5  ISLSGLSAAQLDLNTTSNNIANANTYGFKESRAEFA 40


>gi|218528727|ref|YP_002419543.1| flagellar hook protein FlgE [Methylobacterium chloromethanicum CM4]
 gi|218521030|gb|ACK81615.1| flagellar basal body FlaE domain protein [Methylobacterium
           chloromethanicum CM4]
          Length = 403

 Score = 45.6 bits (106), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 24/44 (54%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  NV+V  E   M E+  +Y AN +     ++++ T ++L R
Sbjct: 360 LEQSNVDVSTELTTMIESQTVYTANSKVFMTGNELLETLMNLKR 403



 Score = 44.1 bits (102), Expect = 0.006,   Method: Composition-based stats.
 Identities = 19/71 (26%), Positives = 29/71 (40%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            LI       SG+  QS R+  ++ENI NA TTG    S  +    +   +V + + G 
Sbjct: 1  MSLIGVLRTGVSGMNAQSNRISTVAENIQNASTTGYKRTSAEFSSLLLDSGDVGNYNSGA 60

Query: 62 RVKKIGVDQST 72
              +    S 
Sbjct: 61 VETTLRRSVSE 71


>gi|302185583|ref|ZP_07262256.1| flagellar hook protein FlgE [Pseudomonas syringae pv. syringae 642]
          Length = 445

 Score = 45.6 bits (106), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 23/42 (54%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           ++  NV++ +E  ++ +    Y AN +TI     +M TT+ +
Sbjct: 403 LEESNVDLTLELVNLIKAQSNYQANAKTISTQSTIMQTTIQM 444


>gi|163850383|ref|YP_001638426.1| hypothetical protein Mext_0950 [Methylobacterium extorquens PA1]
 gi|163661988|gb|ABY29355.1| protein of unknown function DUF1078 domain protein
           [Methylobacterium extorquens PA1]
          Length = 460

 Score = 45.6 bits (106), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 24/46 (52%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             V+  N ++  E + M  T + Y AN + +  +  M++  L+++R
Sbjct: 415 ANVEQSNTDIAAEFSKMIVTQQAYSANTRVMSTAQTMISDLLNVIR 460



 Score = 37.9 bits (86), Expect = 0.43,   Method: Composition-based stats.
 Identities = 15/37 (40%), Positives = 21/37 (56%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDT 38
            + ++   A SGL  QS  +  IS NIAN++TTG  
Sbjct: 1  MDVFSALQTAVSGLKAQSFSLSNISGNIANSQTTGYK 37


>gi|323165587|gb|EFZ51374.1| flagellar basal-body rod protein flgG [Shigella sonnei 53G]
          Length = 143

 Score = 45.6 bits (106), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 21/41 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I+S  IA +GL  Q   M +I+ N+AN  T G       +
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVF 41


>gi|188579925|ref|YP_001923370.1| flagellar hook protein FlgE [Methylobacterium populi BJ001]
 gi|179343423|gb|ACB78835.1| flagellar basal body FlaE domain protein [Methylobacterium populi
           BJ001]
          Length = 402

 Score = 45.6 bits (106), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 24/44 (54%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  NV+V  E   M E+  +Y AN +     ++++ T ++L R
Sbjct: 359 LEQSNVDVSTELTTMIESQTVYTANSKVFMTGNELLETLMNLKR 402



 Score = 44.1 bits (102), Expect = 0.006,   Method: Composition-based stats.
 Identities = 19/71 (26%), Positives = 29/71 (40%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            LI       SG+  QS R+  ++ENI NA TTG    S  +    +   +V + + G 
Sbjct: 1  MSLIGVLRTGVSGMNAQSNRISTVAENIQNASTTGYKRTSAEFSSLLLDSGDVGNYNSGA 60

Query: 62 RVKKIGVDQST 72
              +    S 
Sbjct: 61 VETTLRRSVSE 71


>gi|310644366|ref|YP_003949125.1| fagellar hook-basal body protein [Paenibacillus polymyxa SC2]
 gi|309249317|gb|ADO58884.1| Fagellar hook-basal body protein [Paenibacillus polymyxa SC2]
          Length = 275

 Score = 45.6 bits (106), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/50 (30%), Positives = 24/50 (48%)

Query: 82  PVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            V+  SG ++  NVN+  E  DM +  R+Y    + +  S  MM    +L
Sbjct: 224 DVSVRSGYLEESNVNLAGEMTDMMQVQRMYQMAARALTSSDTMMNLANNL 273


>gi|254446126|ref|ZP_05059602.1| conserved domain protein [Verrucomicrobiae bacterium DG1235]
 gi|198260434|gb|EDY84742.1| conserved domain protein [Verrucomicrobiae bacterium DG1235]
          Length = 250

 Score = 45.6 bits (106), Expect = 0.002,   Method: Composition-based stats.
 Identities = 8/41 (19%), Positives = 20/41 (48%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           ++  NV+   E  ++   +R +  N + I+Q  D++   + 
Sbjct: 205 LEQSNVSATTEMINLINVSRSFQINQRVIQQHDDVLGKAIQ 245


>gi|28211376|ref|NP_782320.1| flagellar hook-associated protein 1 [Clostridium tetani E88]
 gi|28203817|gb|AAO36257.1| flagellar hook-associated protein 1 [Clostridium tetani E88]
          Length = 579

 Score = 45.6 bits (106), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/108 (16%), Positives = 35/108 (32%), Gaps = 6/108 (5%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M  L  + H+  SG+      + + S N+ANA T G +      + +       M+ + G
Sbjct: 1   MSGLFGTLHVGKSGIFANQKAIDVTSHNMANANTEGYSRQRAELQTERPFCTPSMNNAVG 60

Query: 61  VRVKKIGVDQSTFVEE------FDPGHPVANASGIVKYPNVNVLVETA 102
                 GV+ +           +     +      V+       +E  
Sbjct: 61  AGQLGRGVNVADINRVRDAFLDYQVRIELGVQGTYVERNKFLNEIENI 108



 Score = 45.6 bits (106), Expect = 0.002,   Method: Composition-based stats.
 Identities = 9/44 (20%), Positives = 21/44 (47%), Gaps = 1/44 (2%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD-LLR 133
           +   V++  ET ++ +    Y AN + I    +++   ++ L R
Sbjct: 536 QASGVSIDEETTNLIQFQHAYQANAKIISTVDELLDVVINGLKR 579


>gi|240137257|ref|YP_002961726.1| flagellar hook protein FlgE [Methylobacterium extorquens AM1]
 gi|240007223|gb|ACS38449.1| flagellar hook protein FlgE [Methylobacterium extorquens AM1]
          Length = 403

 Score = 45.6 bits (106), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 24/44 (54%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  NV+V  E   M E+  +Y AN +     ++++ T ++L R
Sbjct: 360 LEQSNVDVSTELTTMIESQTVYTANSKVFMTGNELLETLMNLKR 403



 Score = 44.1 bits (102), Expect = 0.006,   Method: Composition-based stats.
 Identities = 19/71 (26%), Positives = 29/71 (40%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            LI       SG+  QS R+  ++ENI NA TTG    S  +    +   +V + + G 
Sbjct: 1  MSLIGVLRTGVSGMNAQSNRISTVAENIQNASTTGYKRTSAEFSSLLLDSGDVGNYNSGA 60

Query: 62 RVKKIGVDQST 72
              +    S 
Sbjct: 61 VETTLRRSVSE 71


>gi|53717914|ref|YP_106900.1| flagellar hook protein FlgE [Burkholderia pseudomallei K96243]
 gi|53724565|ref|YP_104798.1| flagellar hook protein FlgE [Burkholderia mallei ATCC 23344]
 gi|67641538|ref|ZP_00440315.1| flagellar hook protein FlgE [Burkholderia mallei GB8 horse 4]
 gi|76810959|ref|YP_331879.1| flagellar hook protein FlgE [Burkholderia pseudomallei 1710b]
 gi|121599135|ref|YP_994291.1| flagellar hook protein FlgE [Burkholderia mallei SAVP1]
 gi|124384593|ref|YP_001028060.1| flagellar hook protein FlgE [Burkholderia mallei NCTC 10229]
 gi|126449658|ref|YP_001082867.1| flagellar hook protein FlgE [Burkholderia mallei NCTC 10247]
 gi|126453793|ref|YP_001064564.1| flagellar hook protein FlgE [Burkholderia pseudomallei 1106a]
 gi|167001537|ref|ZP_02267332.1| flagellar hook protein FlgE [Burkholderia mallei PRL-20]
 gi|167717660|ref|ZP_02400896.1| flagellar hook protein FlgE [Burkholderia pseudomallei DM98]
 gi|167736703|ref|ZP_02409477.1| flagellar hook protein FlgE [Burkholderia pseudomallei 14]
 gi|167813802|ref|ZP_02445482.1| flagellar hook protein FlgE [Burkholderia pseudomallei 91]
 gi|167822318|ref|ZP_02453789.1| flagellar hook protein FlgE [Burkholderia pseudomallei 9]
 gi|167843908|ref|ZP_02469416.1| flagellar hook protein FlgE [Burkholderia pseudomallei B7210]
 gi|167892410|ref|ZP_02479812.1| flagellar hook protein FlgE [Burkholderia pseudomallei 7894]
 gi|167900908|ref|ZP_02488113.1| flagellar hook protein FlgE [Burkholderia pseudomallei NCTC 13177]
 gi|167909127|ref|ZP_02496218.1| flagellar hook protein FlgE [Burkholderia pseudomallei 112]
 gi|167917164|ref|ZP_02504255.1| flagellar hook protein FlgE [Burkholderia pseudomallei BCC215]
 gi|217424944|ref|ZP_03456440.1| flagellar basal body protein FlaE [Burkholderia pseudomallei 576]
 gi|226199793|ref|ZP_03795344.1| flagellar basal body protein FlaE [Burkholderia pseudomallei
           Pakistan 9]
 gi|242315744|ref|ZP_04814760.1| flagellar basal body protein FlaE [Burkholderia pseudomallei 1106b]
 gi|254182140|ref|ZP_04888737.1| flagellar basal body protein FlaE [Burkholderia pseudomallei 1655]
 gi|254188070|ref|ZP_04894582.1| flagellar basal body protein FlaE [Burkholderia pseudomallei
           Pasteur 52237]
 gi|254196353|ref|ZP_04902777.1| flagellar basal body protein FlaE [Burkholderia pseudomallei S13]
 gi|254201896|ref|ZP_04908260.1| flagellar hook protein FlgE [Burkholderia mallei FMH]
 gi|254207230|ref|ZP_04913581.1| flagellar hook protein FlgE [Burkholderia mallei JHU]
 gi|254259636|ref|ZP_04950690.1| flagellar basal body protein FlaE [Burkholderia pseudomallei 1710a]
 gi|254295814|ref|ZP_04963271.1| flagellar basal body protein FlaE [Burkholderia pseudomallei 406e]
 gi|254359732|ref|ZP_04976003.1| flagellar hook protein FlgE [Burkholderia mallei 2002721280]
 gi|52208328|emb|CAH34261.1| putative flagellar hook protein [Burkholderia pseudomallei K96243]
 gi|52427988|gb|AAU48581.1| flagellar hook protein FlgE [Burkholderia mallei ATCC 23344]
 gi|76580412|gb|ABA49887.1| Flagella basal body rod protein [Burkholderia pseudomallei 1710b]
 gi|121227945|gb|ABM50463.1| flagellar hook protein FlgE [Burkholderia mallei SAVP1]
 gi|124292613|gb|ABN01882.1| flagellar hook protein FlgE [Burkholderia mallei NCTC 10229]
 gi|126227435|gb|ABN90975.1| flagellar basal body protein FlaE [Burkholderia pseudomallei 1106a]
 gi|126242528|gb|ABO05621.1| flagellar hook protein FlgE [Burkholderia mallei NCTC 10247]
 gi|147747790|gb|EDK54866.1| flagellar hook protein FlgE [Burkholderia mallei FMH]
 gi|147752772|gb|EDK59838.1| flagellar hook protein FlgE [Burkholderia mallei JHU]
 gi|148028946|gb|EDK86878.1| flagellar hook protein FlgE [Burkholderia mallei 2002721280]
 gi|157805870|gb|EDO83040.1| flagellar basal body protein FlaE [Burkholderia pseudomallei 406e]
 gi|157935750|gb|EDO91420.1| flagellar basal body protein FlaE [Burkholderia pseudomallei
           Pasteur 52237]
 gi|169653096|gb|EDS85789.1| flagellar basal body protein FlaE [Burkholderia pseudomallei S13]
 gi|184212678|gb|EDU09721.1| flagellar basal body protein FlaE [Burkholderia pseudomallei 1655]
 gi|217391964|gb|EEC31990.1| flagellar basal body protein FlaE [Burkholderia pseudomallei 576]
 gi|225928144|gb|EEH24180.1| flagellar basal body protein FlaE [Burkholderia pseudomallei
           Pakistan 9]
 gi|238522489|gb|EEP85933.1| flagellar hook protein FlgE [Burkholderia mallei GB8 horse 4]
 gi|242138983|gb|EES25385.1| flagellar basal body protein FlaE [Burkholderia pseudomallei 1106b]
 gi|243062738|gb|EES44924.1| flagellar hook protein FlgE [Burkholderia mallei PRL-20]
 gi|254218325|gb|EET07709.1| flagellar basal body protein FlaE [Burkholderia pseudomallei 1710a]
          Length = 413

 Score = 45.6 bits (106), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/83 (15%), Positives = 28/83 (33%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +    +   G  +  +        +      +        ++  NV++  +   +    
Sbjct: 331 FNNPNGLVNVGNNQYVESAASGVPQISAPGSTNHGTLQGSALENSNVDLTSQLVKLITAQ 390

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y AN QTIK    +  T ++L
Sbjct: 391 RNYQANAQTIKTQQTVDQTLINL 413


>gi|330967091|gb|EGH67351.1| flagellar hook protein FlgE [Pseudomonas syringae pv. actinidiae
           str. M302091]
          Length = 586

 Score = 45.6 bits (106), Expect = 0.002,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 17/41 (41%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           ++  NV +  E   + +    Y AN + I     +M T + 
Sbjct: 544 LEGSNVVLADELIALIQAQTAYQANSKAISTEATVMQTLIQ 584



 Score = 34.1 bits (76), Expect = 5.9,   Method: Composition-based stats.
 Identities = 11/36 (30%), Positives = 18/36 (50%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSD 42
          S + A SG+   + R+++   NIAN+ T G      
Sbjct: 2  SFNTAISGINAANKRLEVAGNNIANSGTVGFKSSRA 37


>gi|218886714|ref|YP_002436035.1| flagellar hook-associated protein FlgK [Desulfovibrio vulgaris
          str. 'Miyazaki F']
 gi|218757668|gb|ACL08567.1| flagellar hook-associated protein FlgK [Desulfovibrio vulgaris
          str. 'Miyazaki F']
          Length = 690

 Score = 45.6 bits (106), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 27/71 (38%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  L +  +I +S L+     + + S N+ANA  TG +  +  Y               G
Sbjct: 1  MSSLNSIFNIGSSALSNAQIGISVTSNNLANADVTGYSRQTVQYTTGPTVSSGGYTYGSG 60

Query: 61 VRVKKIGVDQS 71
            V +I    S
Sbjct: 61 AEVAEITRHFS 71


>gi|207108518|ref|ZP_03242680.1| flagellar hook-associated protein FlgK [Helicobacter pylori
           HPKX_438_CA4C1]
          Length = 267

 Score = 45.6 bits (106), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 40/111 (36%), Gaps = 9/111 (8%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M  +++S + + +GL    + + +   NI+NA         + Y R+ +  +       G
Sbjct: 1   MGGILSSLNTSYTGLQAHQSMVDVTGNNISNASD-------EFYSRQRVIAKPQAAYMYG 53

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
            +   +GVD        D            +  N     E + ++E +  +
Sbjct: 54  TKNVNMGVDVEAIERVHDEFVFSRYTKANYE--NTYYDTEFSHLKEASAYF 102


>gi|163802602|ref|ZP_02196494.1| flagellar L-ring protein precursor H [Vibrio sp. AND4]
 gi|159173685|gb|EDP58504.1| flagellar L-ring protein precursor H [Vibrio sp. AND4]
          Length = 249

 Score = 45.6 bits (106), Expect = 0.002,   Method: Composition-based stats.
 Identities = 10/61 (16%), Positives = 29/61 (47%)

Query: 73  FVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
             + ++    ++  +G ++  NVN + E   + +  R +   ++ +  + +M  ++  LL
Sbjct: 187 PNQPYEVDGSISIQTGAIEGSNVNAVGEMTALIDLQRQFEMQVKMMSTAEEMDKSSDSLL 246

Query: 133 R 133
           R
Sbjct: 247 R 247


>gi|146305250|ref|YP_001185715.1| flagellar basal body FlaE domain-containing protein [Pseudomonas
           mendocina ymp]
 gi|145573451|gb|ABP82983.1| flagellar basal body FlaE domain protein [Pseudomonas mendocina
           ymp]
          Length = 395

 Score = 45.6 bits (106), Expect = 0.002,   Method: Composition-based stats.
 Identities = 10/74 (13%), Positives = 26/74 (35%)

Query: 55  MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
           +    G    +     +  +     G      +G ++  NV++  +   + E  R Y AN
Sbjct: 318 LKNVSGTAWVESAESGAALIGVPGVGPFGELVAGSLENSNVDLTQQLVGLMEGQRNYQAN 377

Query: 115 LQTIKQSHDMMTTT 128
            + +  + ++    
Sbjct: 378 TKVLTTNKELTQVL 391



 Score = 37.9 bits (86), Expect = 0.45,   Method: Composition-based stats.
 Identities = 15/38 (39%), Positives = 22/38 (57%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          S +IA +GL+  + ++  IS NIANA TTG       +
Sbjct: 2  SFNIAMTGLSAVNEQLNTISHNIANAGTTGFKSSRTEF 39


>gi|90579909|ref|ZP_01235717.1| flagellar hook protein [Vibrio angustum S14]
 gi|90438794|gb|EAS63977.1| flagellar hook protein [Vibrio angustum S14]
          Length = 467

 Score = 45.6 bits (106), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/104 (15%), Positives = 37/104 (35%)

Query: 28  NIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANAS 87
           NI  + + G            +S E+ +   GG               +   G   +  S
Sbjct: 363 NILASYSNGKDIVVGRVALARVSNEQGLAQLGGTLWNTTQESGQAIWGDASQGSFGSVKS 422

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           G ++  N+++  E  D+    R + A+ + +  ++ +    L +
Sbjct: 423 GTLEQSNIDMTQELVDLITAQRNFQASSRALDVNNQLQQNILQI 466



 Score = 41.8 bits (96), Expect = 0.034,   Method: Composition-based stats.
 Identities = 14/38 (36%), Positives = 17/38 (44%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          S +IA SGL      +   S NIANA T G       +
Sbjct: 2  SMNIALSGLGAAQKDLNTTSNNIANANTFGFKESRAEF 39


>gi|91225874|ref|ZP_01260843.1| polar flagellar FlgF [Vibrio alginolyticus 12G01]
 gi|254230139|ref|ZP_04923534.1| flagellar basal-body rod protein FlgF [Vibrio sp. Ex25]
 gi|262394938|ref|YP_003286792.1| flagellar basal-body rod protein FlgF [Vibrio sp. Ex25]
 gi|269965423|ref|ZP_06179542.1| flagellar basal-body rod protein FlgF [Vibrio alginolyticus 40B]
 gi|91189524|gb|EAS75800.1| polar flagellar FlgF [Vibrio alginolyticus 12G01]
 gi|151937332|gb|EDN56195.1| flagellar basal-body rod protein FlgF [Vibrio sp. Ex25]
 gi|262338532|gb|ACY52327.1| flagellar basal-body rod protein FlgF [Vibrio sp. Ex25]
 gi|269829902|gb|EEZ84132.1| flagellar basal-body rod protein FlgF [Vibrio alginolyticus 40B]
          Length = 249

 Score = 45.6 bits (106), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/99 (14%), Positives = 36/99 (36%), Gaps = 1/99 (1%)

Query: 35  TGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPN 94
               P  +      I   +    S       +   ++     ++    V+  +G ++  N
Sbjct: 150 PQGAPAEEFQAVDRIKLVKPNDQSLFKDTNGLFRHKTPNQP-YEADATVSLQTGAIEGSN 208

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           VN + E   + +  R +   ++ +  + +M  ++  LLR
Sbjct: 209 VNAVGEMTALIDLQRQFEMQVKMMSTAEEMDKSSDSLLR 247


>gi|322421663|ref|YP_004200886.1| flagellar basal-body rod protein FlgF [Geobacter sp. M18]
 gi|320128050|gb|ADW15610.1| flagellar basal-body rod protein FlgF [Geobacter sp. M18]
          Length = 238

 Score = 45.6 bits (106), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 24/61 (39%), Gaps = 1/61 (1%)

Query: 74  VEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM-MTTTLDLL 132
            +            G ++  NV V+VE A M E +R +    + +K   D+      DL 
Sbjct: 177 PQTATTASTAGVKQGYLESSNVKVVVEMARMIEASRYFEICAKAVKTYDDLNARAANDLG 236

Query: 133 R 133
           +
Sbjct: 237 K 237



 Score = 34.1 bits (76), Expect = 6.8,   Method: Composition-based stats.
 Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 2/39 (5%)

Query: 4  LIASAHIANSG-LAVQSARMQIISENIANARTTGDTPGS 41
          + A  + A +G L+ Q  R+ +IS N+ANA TTG     
Sbjct: 1  MNAGMYAALTGNLSAQR-RLDVISNNLANASTTGFKADQ 38


>gi|323341367|ref|ZP_08081611.1| flagellar basal-body rod protein FlgG [Lactobacillus ruminis ATCC
           25644]
 gi|323091244|gb|EFZ33872.1| flagellar basal-body rod protein FlgG [Lactobacillus ruminis ATCC
           25644]
          Length = 256

 Score = 45.6 bits (106), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 22/42 (52%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
             G+V+  NV+V    + M  T R Y  N + ++ + +M+ T
Sbjct: 209 NQGLVELSNVDVADTMSKMIITQRAYQMNSKALQSTDEMLQT 250



 Score = 40.6 bits (93), Expect = 0.064,   Method: Composition-based stats.
 Identities = 11/65 (16%), Positives = 20/65 (30%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            +     I+ SGL      M ++S N+AN  T G       ++    +           
Sbjct: 1  MNMSQILSISRSGLNAYQHEMDVVSNNLANVDTLGYKDKRTTFQELLNNGTNANEVGLSQ 60

Query: 62 RVKKI 66
              +
Sbjct: 61 NAGNV 65


>gi|126441055|ref|YP_001057322.1| flagellar hook protein FlgE [Burkholderia pseudomallei 668]
 gi|126220548|gb|ABN84054.1| flagellar basal body protein FlaE [Burkholderia pseudomallei 668]
          Length = 413

 Score = 45.6 bits (106), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/83 (15%), Positives = 28/83 (33%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +    +   G  +  +        +      +        ++  NV++  +   +    
Sbjct: 331 FNNPNGLVNVGNNQYVESAASGVPQISAPGSTNHGTLQGSALENSNVDLTSQLVKLITAQ 390

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y AN QTIK    +  T ++L
Sbjct: 391 RNYQANAQTIKTQQTVDQTLINL 413


>gi|268317780|ref|YP_003291499.1| flagellar basal body rod protein [Rhodothermus marinus DSM 4252]
 gi|262335314|gb|ACY49111.1| flagellar basal body rod protein [Rhodothermus marinus DSM 4252]
          Length = 242

 Score = 45.6 bits (106), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/60 (20%), Positives = 25/60 (41%), Gaps = 1/60 (1%)

Query: 75  EEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM-TTTLDLLR 133
           +E  P        G ++  NVN ++   +M E    +    + I+ +  ++   T DL +
Sbjct: 182 QEPLPVETPHLRPGFLESSNVNPVLAMTEMIEHFHRFETQQKVIQTTDQLLGQITRDLGK 241


>gi|218528943|ref|YP_002419759.1| hypothetical protein Mchl_0913 [Methylobacterium chloromethanicum
           CM4]
 gi|218521246|gb|ACK81831.1| protein of unknown function DUF1078 domain protein
           [Methylobacterium chloromethanicum CM4]
          Length = 460

 Score = 45.6 bits (106), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 24/46 (52%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             V+  N ++  E + M  T + Y AN + +  +  M++  L+++R
Sbjct: 415 ANVEQSNTDIAAEFSKMIVTQQAYSANTRVMSTAQTMISDLLNVIR 460



 Score = 37.9 bits (86), Expect = 0.44,   Method: Composition-based stats.
 Identities = 15/37 (40%), Positives = 21/37 (56%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDT 38
            + ++   A SGL  QS  +  IS NIAN++TTG  
Sbjct: 1  MDVFSALQTAVSGLKAQSFSLSNISGNIANSQTTGYK 37


>gi|299822273|ref|ZP_07054159.1| flagellar hook protein FlgE [Listeria grayi DSM 20601]
 gi|299815802|gb|EFI83040.1| flagellar hook protein FlgE [Listeria grayi DSM 20601]
          Length = 411

 Score = 45.6 bits (106), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/105 (13%), Positives = 35/105 (33%)

Query: 29  IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASG 88
           IA + + G           T S  + +  +G                          +  
Sbjct: 307 IAVSYSDGTIIPVAQLGVATFSNVDGLVKNGNGEYTPGLSSGDPVFGVAGQNGAGGISGA 366

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NV++  E  ++      +  N + I+ + D+M   ++L++
Sbjct: 367 SLEGSNVDLSQEFVNLMTYQSGFQGNTKVIRVADDVMKQIVNLIQ 411



 Score = 39.1 bits (89), Expect = 0.22,   Method: Composition-based stats.
 Identities = 17/93 (18%), Positives = 35/93 (37%), Gaps = 7/93 (7%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +  + + A SG+      + + S NIANA TTG       Y+R+++ F ++++ +    V
Sbjct: 1  MNQTMYTAISGMNAFQQALSVTSNNIANANTTG-------YKRQSVVFNDLLYQNTLGSV 53

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVN 96
                 +  +         A  +         
Sbjct: 54 TSGLYAGTNPMSFGSGTKIGAVITDYTAGSPTA 86


>gi|222095377|ref|YP_002529437.1| flagellar hook protein flge [Bacillus cereus Q1]
 gi|221239435|gb|ACM12145.1| flagellar hook protein [Bacillus cereus Q1]
 gi|324325771|gb|ADY21031.1| flagellar hook protein FlgE [Bacillus thuringiensis serovar
           finitimus YBT-020]
          Length = 406

 Score = 45.6 bits (106), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 24/43 (55%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV++ VE  D+    R +  N + IK S +++   ++L+R
Sbjct: 364 EGANVDLSVEFVDLMLYQRGFQGNAKVIKVSDEVLNEVVNLIR 406



 Score = 37.9 bits (86), Expect = 0.45,   Method: Composition-based stats.
 Identities = 13/69 (18%), Positives = 30/69 (43%), Gaps = 6/69 (8%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I + + + +G+      + + S NIANA+T G        ++K +  + + + S G + 
Sbjct: 1  MIKALYTSITGMNATQNALSVTSNNIANAQTVG------YKKQKAMFDDLLYNNSIGAKG 54

Query: 64 KKIGVDQST 72
                 + 
Sbjct: 55 DGNYAGTNP 63


>gi|163850123|ref|YP_001638166.1| flagellar hook protein FlgE [Methylobacterium extorquens PA1]
 gi|163661728|gb|ABY29095.1| protein of unknown function DUF1078 domain protein
           [Methylobacterium extorquens PA1]
          Length = 403

 Score = 45.6 bits (106), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 24/44 (54%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  NV+V  E   M E+  +Y AN +     ++++ T ++L R
Sbjct: 360 LEQSNVDVSTELTTMIESQTVYTANSKVFMTGNELLETLMNLKR 403



 Score = 44.1 bits (102), Expect = 0.006,   Method: Composition-based stats.
 Identities = 19/71 (26%), Positives = 29/71 (40%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            LI       SG+  QS R+  ++ENI NA TTG    S  +    +   +V + + G 
Sbjct: 1  MSLIGVLRTGVSGMNAQSNRISTVAENIQNASTTGYKRTSAEFSSLLLDSGDVGNYNSGA 60

Query: 62 RVKKIGVDQST 72
              +    S 
Sbjct: 61 VETTLRRSVSE 71


>gi|89075496|ref|ZP_01161907.1| putative flagellar basal-body rod protein FlgF [Photobacterium sp.
           SKA34]
 gi|89048768|gb|EAR54339.1| putative flagellar basal-body rod protein FlgF [Photobacterium sp.
           SKA34]
          Length = 249

 Score = 45.6 bits (106), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 24/47 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G+++  NVN + E   M +  R +   ++ +K + +M   +  L+R
Sbjct: 201 KGMLEGSNVNAVSEMTSMIDLQRHFEMQVKLMKTAEEMDKASSSLMR 247


>gi|224373466|ref|YP_002607838.1| flagellar basal body and hook protein [Nautilia profundicola AmH]
 gi|223589855|gb|ACM93591.1| flagellar basal body and hook protein [Nautilia profundicola AmH]
          Length = 642

 Score = 45.6 bits (106), Expect = 0.002,   Method: Composition-based stats.
 Identities = 8/44 (18%), Positives = 21/44 (47%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  NV+      ++  T + Y +  +T+  S  M+   +D+ +
Sbjct: 598 LEASNVDFSQAMTELIVTQKAYSSAAKTVTTSDQMIQRAIDMKK 641


>gi|148976395|ref|ZP_01813101.1| polar flagellar FlgF [Vibrionales bacterium SWAT-3]
 gi|145964218|gb|EDK29474.1| polar flagellar FlgF [Vibrionales bacterium SWAT-3]
          Length = 249

 Score = 45.6 bits (106), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/61 (19%), Positives = 27/61 (44%)

Query: 73  FVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
             + ++    V    G V+  NVN + E   + +  R +   ++ +  + +M  ++  LL
Sbjct: 187 PEQAYEADAAVTLLKGAVEGSNVNAVGEMTSLIDLQRQFEMQVKMMSTAEEMDKSSDSLL 246

Query: 133 R 133
           R
Sbjct: 247 R 247


>gi|148266117|ref|YP_001232823.1| flagellar basal body rod protein [Geobacter uraniireducens Rf4]
 gi|146399617|gb|ABQ28250.1| flagellar basal body rod protein [Geobacter uraniireducens Rf4]
          Length = 244

 Score = 45.6 bits (106), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 27/65 (41%), Gaps = 1/65 (1%)

Query: 70  QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
            +            +   G ++  NVNV+ E A M ET+R + +  + I+   D+     
Sbjct: 179 PADPQVAPQAVTTASVKQGFLEDSNVNVVTEMARMIETSRYFDSCQKVIRSYDDVAAKAA 238

Query: 130 D-LLR 133
           + L +
Sbjct: 239 NELGK 243



 Score = 37.5 bits (85), Expect = 0.65,   Method: Composition-based stats.
 Identities = 12/38 (31%), Positives = 19/38 (50%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGS 41
          + +  + A SG      R+++IS N+ANA T G     
Sbjct: 1  MNSGLYAALSGSLAAMQRLEVISNNLANANTPGFKGDR 38


>gi|331017025|gb|EGH97081.1| flagellar hook protein FlgE [Pseudomonas syringae pv. lachrymans
           str. M302278PT]
          Length = 586

 Score = 45.6 bits (106), Expect = 0.002,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 17/41 (41%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           ++  NV +  E   + +    Y AN + I     +M T + 
Sbjct: 544 LEGSNVVLADELIALIQAQTAYQANSKAISTEATVMQTLIQ 584



 Score = 34.1 bits (76), Expect = 6.1,   Method: Composition-based stats.
 Identities = 11/36 (30%), Positives = 18/36 (50%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSD 42
          S + A SG+   + R+++   NIAN+ T G      
Sbjct: 2  SFNTAISGINAANKRLEVAGNNIANSGTIGFKSSRA 37


>gi|294140186|ref|YP_003556164.1| flagellar basal-body rod protein FlgF [Shewanella violacea DSS12]
 gi|293326655|dbj|BAJ01386.1| flagellar basal-body rod protein FlgF [Shewanella violacea DSS12]
          Length = 247

 Score = 45.6 bits (106), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 24/48 (50%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            SG V+  NVN + E   + +  R +   ++ +K + +M   +  L+R
Sbjct: 198 ESGAVEGSNVNAVSEMVALIDIQRQFEMQVKMMKTAEEMDKASSSLMR 245


>gi|254559637|ref|YP_003066732.1| flagellar hook protein flgE [Methylobacterium extorquens DM4]
 gi|254266915|emb|CAX22714.1| putative Flagellar hook protein flgE [Methylobacterium extorquens
           DM4]
          Length = 460

 Score = 45.6 bits (106), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 24/46 (52%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             V+  N ++  E + M  T + Y AN + +  +  M++  L+++R
Sbjct: 415 ANVEQSNTDIAAEFSKMIVTQQAYSANTRVMSTAQTMISDLLNVIR 460



 Score = 37.9 bits (86), Expect = 0.46,   Method: Composition-based stats.
 Identities = 15/37 (40%), Positives = 21/37 (56%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDT 38
            + ++   A SGL  QS  +  IS NIAN++TTG  
Sbjct: 1  MDVFSALQTAVSGLKAQSFSLSNISGNIANSQTTGYK 37


>gi|170755952|ref|YP_001782255.1| flagellar basal body rod protein FlgG [Clostridium botulinum B1
           str. Okra]
 gi|169121164|gb|ACA45000.1| flagellar basal body rod protein [Clostridium botulinum B1 str.
           Okra]
          Length = 255

 Score = 45.6 bits (106), Expect = 0.002,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 21/45 (46%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
               ++  NVNV  E  +M  T R +  N + ++   + +  T++
Sbjct: 205 RQNSLEKSNVNVTNEMVNMLTTMRSFETNQKIVQSIDETLGKTVN 249


>gi|254175270|ref|ZP_04881931.1| flagellar hook protein FlgE [Burkholderia mallei ATCC 10399]
 gi|160696315|gb|EDP86285.1| flagellar hook protein FlgE [Burkholderia mallei ATCC 10399]
          Length = 413

 Score = 45.6 bits (106), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/83 (15%), Positives = 28/83 (33%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +    +   G  +  +        +      +        ++  NV++  +   +    
Sbjct: 331 FNNPNGLVNVGNNQYVESAASGVPQISAPGSTNHGTLQGSALENSNVDLTSQLVKLITAQ 390

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y AN QTIK    +  T ++L
Sbjct: 391 RNYQANAQTIKTQQTVDQTLINL 413


>gi|304409978|ref|ZP_07391597.1| fagellar hook-basal body protein [Shewanella baltica OS183]
 gi|307302309|ref|ZP_07582067.1| fagellar hook-basal body protein [Shewanella baltica BA175]
 gi|304351387|gb|EFM15786.1| fagellar hook-basal body protein [Shewanella baltica OS183]
 gi|306914347|gb|EFN44768.1| fagellar hook-basal body protein [Shewanella baltica BA175]
          Length = 453

 Score = 45.6 bits (106), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/103 (16%), Positives = 40/103 (38%)

Query: 29  IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASG 88
           I  + + G +           + E+ +   G    K           E + G   + +S 
Sbjct: 350 ITASYSNGSSVALARVALVRFANEQGLTQVGNTSWKASLASGQALAGEANSGTFGSISSS 409

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            ++  N+++  E  D+    R + AN +T++ ++ +  T L +
Sbjct: 410 ALEQSNIDLTTELVDLISAQRNFQANSRTLEVNNTLQQTILQI 452



 Score = 39.9 bits (91), Expect = 0.12,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 18/39 (46%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          S +IA SG+A     +   + NIANA T G       + 
Sbjct: 2  SFNIALSGIAAAQKDLNTTANNIANANTIGFKESRAEFA 40


>gi|240137459|ref|YP_002961930.1| putative Flagellar hook protein flgE [Methylobacterium extorquens
           AM1]
 gi|240007427|gb|ACS38653.1| putative Flagellar hook protein flgE [Methylobacterium extorquens
           AM1]
          Length = 460

 Score = 45.6 bits (106), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 24/46 (52%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             V+  N ++  E + M  T + Y AN + +  +  M++  L+++R
Sbjct: 415 ANVEQSNTDIAAEFSKMIVTQQAYSANTRVMSTAQTMISDLLNVIR 460



 Score = 37.9 bits (86), Expect = 0.46,   Method: Composition-based stats.
 Identities = 15/37 (40%), Positives = 21/37 (56%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDT 38
            + ++   A SGL  QS  +  IS NIAN++TTG  
Sbjct: 1  MDVFSALQTAVSGLKAQSFSLSNISGNIANSQTTGYK 37


>gi|327441421|dbj|BAK17786.1| flagellar basal body rod protein [Solibacillus silvestris StLB046]
          Length = 280

 Score = 45.6 bits (106), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/123 (12%), Positives = 32/123 (26%), Gaps = 4/123 (3%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG---SGGVRVKKIGVDQS 71
           L     RMQ  ++NI  +        +D                       +        
Sbjct: 156 LDANGERMQFDNDNIRISSDGAIFDENDVQVGTLGVAFSENPDVLVKRDNGLFNTLDGVD 215

Query: 72  TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD- 130
                       +     ++  NV+      D+    R + AN + ++     M   ++ 
Sbjct: 216 LPSAYGQANVQFSMQQQYLEGSNVDASKAMTDLLTAYRAFEANQKVLQAYDKSMEKAVNE 275

Query: 131 LLR 133
           + R
Sbjct: 276 IGR 278



 Score = 36.8 bits (83), Expect = 0.95,   Method: Composition-based stats.
 Identities = 10/56 (17%), Positives = 22/56 (39%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          +    +   +G+  Q  + +I++ N+ANA T G        R         ++ + 
Sbjct: 1  MFKGFYTVATGMVAQQRKTEILTNNMANANTPGFKSDQTTIRSFPDMLMSAVNSTN 56


>gi|153001472|ref|YP_001367153.1| flagellar hook protein FlgE [Shewanella baltica OS185]
 gi|160876203|ref|YP_001555519.1| flagellar hook protein FlgE [Shewanella baltica OS195]
 gi|217972598|ref|YP_002357349.1| flagellar hook protein FlgE [Shewanella baltica OS223]
 gi|151366090|gb|ABS09090.1| flagellar basal body FlaE domain protein [Shewanella baltica OS185]
 gi|160861725|gb|ABX50259.1| flagellar basal body FlaE domain protein [Shewanella baltica OS195]
 gi|217497733|gb|ACK45926.1| flagellar basal body FlaE domain protein [Shewanella baltica OS223]
 gi|315268393|gb|ADT95246.1| fagellar hook-basal body protein [Shewanella baltica OS678]
          Length = 453

 Score = 45.6 bits (106), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/103 (16%), Positives = 40/103 (38%)

Query: 29  IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASG 88
           I  + + G +           + E+ +   G    K           E + G   + +S 
Sbjct: 350 ITASYSNGSSVPLARVALVRFANEQGLTQVGNTSWKASLNSGPALAGEANSGTFGSISSS 409

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            ++  N+++  E  D+    R + AN +T++ ++ +  T L +
Sbjct: 410 ALEQSNIDLTTELVDLISAQRNFQANSRTLEVNNTLQQTVLQI 452



 Score = 41.0 bits (94), Expect = 0.062,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 18/39 (46%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          S +IA SG++     +   + NIANA T G       + 
Sbjct: 2  SFNIALSGISAAQKDLNTTANNIANANTIGFKESRAEFA 40


>gi|153953798|ref|YP_001394563.1| flagellar basal body rod protein FlgG [Clostridium kluyveri DSM
           555]
 gi|219854414|ref|YP_002471536.1| hypothetical protein CKR_1071 [Clostridium kluyveri NBRC 12016]
 gi|146346679|gb|EDK33215.1| FlgG2 [Clostridium kluyveri DSM 555]
 gi|219568138|dbj|BAH06122.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 261

 Score = 45.6 bits (106), Expect = 0.003,   Method: Composition-based stats.
 Identities = 11/63 (17%), Positives = 23/63 (36%), Gaps = 1/63 (1%)

Query: 72  TFVEEFDPGHPVAN-ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
                    +  AN   G ++  NV++  E  DM    R +    + +  + +M     +
Sbjct: 199 PAENVQVTENQDANILQGYLEQSNVDLGREITDMILAQRAFALGAKGLTTADEMWGLINN 258

Query: 131 LLR 133
           + R
Sbjct: 259 MKR 261



 Score = 41.4 bits (95), Expect = 0.044,   Method: Composition-based stats.
 Identities = 11/97 (11%), Positives = 28/97 (28%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           ++ +   + S +  +  ++  IS N+ANA T G       ++       +          
Sbjct: 1   MLRAIWNSASAMNAEQEKLNSISNNMANAETVGYKREVVNFQDLVYETLDRNGYPVNDEG 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVE 100
           +            +       +        N+ +  E
Sbjct: 61  QNTINGTGVRTTNWLRDTLQGSLQETGLKANMAIDGE 97


>gi|222823431|ref|YP_002575005.1| flagellar hook-associated protein FlgK [Campylobacter lari RM2100]
 gi|222538653|gb|ACM63754.1| flagellar hook-associated protein FlgK [Campylobacter lari RM2100]
          Length = 609

 Score = 45.6 bits (106), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/108 (17%), Positives = 33/108 (30%), Gaps = 2/108 (1%)

Query: 27  ENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV--DQSTFVEEFDPGHPVA 84
            +IANA         + Y +        + G       KI    + ++F    +      
Sbjct: 501 NDIANAMLQLQNQKVNFYNKDGTVDSLTLDGYYRKFTGKIASNAESNSFAHATNMTVFNT 560

Query: 85  NASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
             +       VN   E A + +    Y A  + +     M+ T L L 
Sbjct: 561 AYAEYQSKSGVNTNEELAALIQYQASYGAAAKIVTTVDQMIETLLGLK 608



 Score = 36.8 bits (83), Expect = 1.1,   Method: Composition-based stats.
 Identities = 11/65 (16%), Positives = 20/65 (30%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            +  S +   SG+     ++     NI+NA     T                +H   G 
Sbjct: 1  MGIFDSLYTGVSGIKAAEIQINTTGNNISNANAVFYTRQRAVQSSGMSIDRGGLHLGTGT 60

Query: 62 RVKKI 66
          ++  I
Sbjct: 61 QIDTI 65


>gi|170737038|ref|YP_001778298.1| flagellar basal body FlaE domain-containing protein [Burkholderia
           cenocepacia MC0-3]
 gi|169819226|gb|ACA93808.1| flagellar basal body FlaE domain protein [Burkholderia cenocepacia
           MC0-3]
          Length = 389

 Score = 45.2 bits (105), Expect = 0.003,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 19/41 (46%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           V+  NV++  E   +    + Y AN + +   ++MM   + 
Sbjct: 347 VEQSNVDMTAELVSLMGAQQNYQANSKVLSTENEMMRALMQ 387


>gi|114706758|ref|ZP_01439658.1| flagellar basal body rod protein [Fulvimarina pelagi HTCC2506]
 gi|114537706|gb|EAU40830.1| flagellar basal body rod protein [Fulvimarina pelagi HTCC2506]
          Length = 240

 Score = 45.2 bits (105), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/97 (13%), Positives = 31/97 (31%), Gaps = 3/97 (3%)

Query: 33  RTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKY 92
                  G +          +  + +       +    +T V EF   + V    G V+ 
Sbjct: 141 NGMIHQNGQEVAAVGLFRIPQGANVTRADTSGVVSDVPATPVVEFLTDNVV---QGYVEE 197

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
            NVN + E   +    R + +    ++ +   ++  +
Sbjct: 198 ANVNPVQEMTRLIALQRAFESAANVVQTNDRSLSEAI 234


>gi|254559268|ref|YP_003066363.1| flagellar hook protein FlgE [Methylobacterium extorquens DM4]
 gi|254266546|emb|CAX22310.1| flagellar hook protein FlgE [Methylobacterium extorquens DM4]
          Length = 403

 Score = 45.2 bits (105), Expect = 0.003,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 24/44 (54%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  NV+V  E   M E+  +Y AN +     ++++ T ++L R
Sbjct: 360 LEQSNVDVSTELTTMIESQTVYTANSKVFMTGNELLETLMNLKR 403



 Score = 44.1 bits (102), Expect = 0.007,   Method: Composition-based stats.
 Identities = 19/71 (26%), Positives = 29/71 (40%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            LI       SG+  QS R+  ++ENI NA TTG    S  +    +   +V + + G 
Sbjct: 1  MSLIGVLRTGVSGMNAQSNRISTVAENIQNASTTGYKRTSAEFSSLLLDSGDVGNYNSGA 60

Query: 62 RVKKIGVDQST 72
              +    S 
Sbjct: 61 VETTLRRSVSE 71


>gi|28897554|ref|NP_797159.1| flagellar basal body rod protein FlgF [Vibrio parahaemolyticus RIMD
           2210633]
 gi|153839688|ref|ZP_01992355.1| flagellar basal-body rod protein FlgF [Vibrio parahaemolyticus
           AQ3810]
 gi|260364612|ref|ZP_05777214.1| flagellar basal-body rod protein FlgF [Vibrio parahaemolyticus
           K5030]
 gi|260878283|ref|ZP_05890638.1| flagellar basal-body rod protein FlgF [Vibrio parahaemolyticus
           AN-5034]
 gi|260898113|ref|ZP_05906609.1| flagellar basal-body rod protein FlgF [Vibrio parahaemolyticus
           Peru-466]
 gi|260901955|ref|ZP_05910350.1| flagellar basal-body rod protein FlgF [Vibrio parahaemolyticus
           AQ4037]
 gi|5361009|gb|AAD42916.1|U12817_10 polar flagellar FlgF homolog [Vibrio parahaemolyticus]
 gi|28805766|dbj|BAC59043.1| polar flagellar FlgF [Vibrio parahaemolyticus RIMD 2210633]
 gi|149746798|gb|EDM57786.1| flagellar basal-body rod protein FlgF [Vibrio parahaemolyticus
           AQ3810]
 gi|308086109|gb|EFO35804.1| flagellar basal-body rod protein FlgF [Vibrio parahaemolyticus
           Peru-466]
 gi|308090198|gb|EFO39893.1| flagellar basal-body rod protein FlgF [Vibrio parahaemolyticus
           AN-5034]
 gi|308106789|gb|EFO44329.1| flagellar basal-body rod protein FlgF [Vibrio parahaemolyticus
           AQ4037]
 gi|308115108|gb|EFO52648.1| flagellar basal-body rod protein FlgF [Vibrio parahaemolyticus
           K5030]
 gi|328473452|gb|EGF44300.1| flagellar basal body rod protein FlgF [Vibrio parahaemolyticus
           10329]
          Length = 249

 Score = 45.2 bits (105), Expect = 0.003,   Method: Composition-based stats.
 Identities = 10/61 (16%), Positives = 29/61 (47%)

Query: 73  FVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
             + ++    ++  +G ++  NVN + E   + +  R +   ++ +  + +M  ++  LL
Sbjct: 187 PNQPYEADGTISIQTGAIEGSNVNAVGEMTALIDLQRQFEMQVKMMSTAEEMDKSSDSLL 246

Query: 133 R 133
           R
Sbjct: 247 R 247


>gi|83955137|ref|ZP_00963793.1| Flagellar basal body rod protein [Sulfitobacter sp. NAS-14.1]
 gi|83840466|gb|EAP79639.1| Flagellar basal body rod protein [Sulfitobacter sp. NAS-14.1]
          Length = 259

 Score = 45.2 bits (105), Expect = 0.003,   Method: Composition-based stats.
 Identities = 11/64 (17%), Positives = 24/64 (37%), Gaps = 1/64 (1%)

Query: 71  STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
                +           G ++  NVN ++E   + +  R Y  +++ +    D+  T + 
Sbjct: 195 PPNAGQPQQMENPQVKQGFIEGSNVNAVLEMTRLIDIQRAYENSVKLMGSDDDLTRTAIQ 254

Query: 131 -LLR 133
            L R
Sbjct: 255 KLGR 258


>gi|330875984|gb|EGH10133.1| flagellar hook protein FlgE [Pseudomonas syringae pv. morsprunorum
           str. M302280PT]
          Length = 586

 Score = 45.2 bits (105), Expect = 0.003,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 17/41 (41%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           ++  NV +  E   + +    Y AN + I     +M T + 
Sbjct: 544 LEGSNVVLADELIALIQAQTAYQANSKAISTEATVMQTLIQ 584



 Score = 34.1 bits (76), Expect = 6.3,   Method: Composition-based stats.
 Identities = 11/36 (30%), Positives = 18/36 (50%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSD 42
          S + A SG+   + R+++   NIAN+ T G      
Sbjct: 2  SFNTAISGINAANKRLEVAGNNIANSGTIGFKSSRA 37


>gi|226315010|ref|YP_002774906.1| flagellar hook-basal body protein [Brevibacillus brevis NBRC
           100599]
 gi|226097960|dbj|BAH46402.1| putative flagellar hook-basal body protein [Brevibacillus brevis
           NBRC 100599]
          Length = 276

 Score = 45.2 bits (105), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 21/58 (36%)

Query: 74  VEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
                  + V    G ++  NV++  E + +    R Y  N + I  S  MM     L
Sbjct: 216 KYTSAYDNGVTLRQGALESSNVSMTEEMSQLVNIQRAYQLNSRAIGISDQMMGIANQL 273


>gi|145297454|ref|YP_001140295.1| flagellar hook protein FlgE [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|142850226|gb|ABO88547.1| lateral flagellar hook protein LfgE [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 397

 Score = 45.2 bits (105), Expect = 0.003,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 18/41 (43%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            +  NV++  E   +  + R Y AN +TI  +  M     +
Sbjct: 355 YESSNVDLTGELVSLMTSQRNYQANAKTISSADKMTQVLFN 395



 Score = 34.1 bits (76), Expect = 7.3,   Method: Composition-based stats.
 Identities = 13/65 (20%), Positives = 22/65 (33%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          S  I  SGL   +  + +IS N+ANA T G       +          +  +       +
Sbjct: 2  SFSIGLSGLRAVNQELSVISNNVANASTAGFKSSRAEFAAIYGVEMNNVSQNFDRNGDVM 61

Query: 67 GVDQS 71
             + 
Sbjct: 62 RTGKG 66


>gi|299538000|ref|ZP_07051286.1| flagellar basal-body rod protein [Lysinibacillus fusiformis ZC1]
 gi|298726582|gb|EFI67171.1| flagellar basal-body rod protein [Lysinibacillus fusiformis ZC1]
          Length = 277

 Score = 45.2 bits (105), Expect = 0.003,   Method: Composition-based stats.
 Identities = 7/45 (15%), Positives = 17/45 (37%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
               ++  NV+      D+    R + AN + ++     M   ++
Sbjct: 228 RQNFLEGSNVDSGRTMTDLMTAYRAFEANQKVLQAYDRSMEKAVN 272



 Score = 33.7 bits (75), Expect = 9.0,   Method: Composition-based stats.
 Identities = 9/50 (18%), Positives = 19/50 (38%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE 53
          +    +   +G+  Q  R ++++ N++NA T G        R        
Sbjct: 1  MFKGFYTVATGMITQQRRTELLTNNLSNANTPGFKADQSTIRSFPDMLMS 50


>gi|163750569|ref|ZP_02157807.1| flagellar basal-body rod protein FlgF [Shewanella benthica KT99]
 gi|161329724|gb|EDQ00713.1| flagellar basal-body rod protein FlgF [Shewanella benthica KT99]
          Length = 246

 Score = 45.2 bits (105), Expect = 0.003,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 23/48 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            SG V+  NVN + E   +    R +   ++ +K + +M   +  L+R
Sbjct: 198 ESGAVEGSNVNAVSEMVALISIQRQFEMQVKMMKTAEEMDKASSALMR 245


>gi|312880336|ref|ZP_07740136.1| fagellar hook-basal body protein [Aminomonas paucivorans DSM 12260]
 gi|310783627|gb|EFQ24025.1| fagellar hook-basal body protein [Aminomonas paucivorans DSM 12260]
          Length = 264

 Score = 45.2 bits (105), Expect = 0.003,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 27/79 (34%), Gaps = 4/79 (5%)

Query: 50  SFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNR 109
                     G  +     D     E   P   V    G ++  NVNV+ E + M E NR
Sbjct: 182 FPTPTRMRHVGKSLLAETPDSGAPEEVEQPKVAV----GFLERSNVNVVEEMSRMIEANR 237

Query: 110 LYMANLQTIKQSHDMMTTT 128
            Y    +T+    ++ +  
Sbjct: 238 AYEVAAKTVTIQDELTSRL 256



 Score = 34.1 bits (76), Expect = 7.3,   Method: Composition-based stats.
 Identities = 8/33 (24%), Positives = 16/33 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          +    +   S + VQ   + ++  N+AN  T+G
Sbjct: 1  MFRGIYSGTSAMLVQEKMLDVVGNNLANVDTSG 33


>gi|15616300|ref|NP_244605.1| flagellar basal-body rod protein [Bacillus halodurans C-125]
 gi|10176362|dbj|BAB07457.1| flagellar basal-body rod protein [Bacillus halodurans C-125]
          Length = 274

 Score = 45.2 bits (105), Expect = 0.003,   Method: Composition-based stats.
 Identities = 10/71 (14%), Positives = 25/71 (35%)

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           G  + +   D        +         G ++  NV+      +M +  R + AN Q ++
Sbjct: 198 GNGLLRFEGDGELPTGVGNAAVNYQLQQGFIERSNVDAAQTMTEMMQAYRTFEANQQVLR 257

Query: 120 QSHDMMTTTLD 130
              + +   ++
Sbjct: 258 AYDESLGKAVN 268



 Score = 36.8 bits (83), Expect = 1.1,   Method: Composition-based stats.
 Identities = 15/91 (16%), Positives = 30/91 (32%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++     A +G+  Q  R ++++ N+AN  T G        R         M+     + 
Sbjct: 1  MLRGLWGAAAGMITQQQRQEMLTNNLANVNTPGYKADQAAIRAFPNMLIAAMNTGNVPKG 60

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIVKYPN 94
              + + T         P      +V+  N
Sbjct: 61 VAPVIGELTTGVYLQERMPNFRQGDLVETQN 91


>gi|83944163|ref|ZP_00956619.1| Flagellar basal body rod protein [Sulfitobacter sp. EE-36]
 gi|83845030|gb|EAP82911.1| Flagellar basal body rod protein [Sulfitobacter sp. EE-36]
          Length = 259

 Score = 45.2 bits (105), Expect = 0.003,   Method: Composition-based stats.
 Identities = 11/64 (17%), Positives = 24/64 (37%), Gaps = 1/64 (1%)

Query: 71  STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
                +           G ++  NVN ++E   + +  R Y  +++ +    D+  T + 
Sbjct: 195 PPNAGQPQQMENPQVKQGFIEGSNVNAVLEMTRLIDIQRAYENSVKLMGSDDDLTRTAIQ 254

Query: 131 -LLR 133
            L R
Sbjct: 255 KLGR 258


>gi|333008281|gb|EGK27755.1| flagellar basal-body rod protein flgG [Shigella flexneri K-272]
 gi|333019771|gb|EGK39043.1| flagellar basal-body rod protein flgG [Shigella flexneri K-227]
          Length = 163

 Score = 45.2 bits (105), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 21/41 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I+S  IA +GL  Q   M +I+ N+AN  T G       +
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVF 41


>gi|213967581|ref|ZP_03395729.1| flagellar hook protein FlgE [Pseudomonas syringae pv. tomato T1]
 gi|301385714|ref|ZP_07234132.1| flagellar hook protein FlgE [Pseudomonas syringae pv. tomato Max13]
 gi|302060074|ref|ZP_07251615.1| flagellar hook protein FlgE [Pseudomonas syringae pv. tomato K40]
 gi|302134833|ref|ZP_07260823.1| flagellar hook protein FlgE [Pseudomonas syringae pv. tomato NCPPB
           1108]
 gi|213927882|gb|EEB61429.1| flagellar hook protein FlgE [Pseudomonas syringae pv. tomato T1]
          Length = 586

 Score = 45.2 bits (105), Expect = 0.003,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 17/41 (41%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           ++  NV +  E   + +    Y AN + I     +M T + 
Sbjct: 544 LEGSNVVLADELIALIQAQTAYQANSKAISTEATVMQTLIQ 584



 Score = 34.1 bits (76), Expect = 6.6,   Method: Composition-based stats.
 Identities = 11/36 (30%), Positives = 18/36 (50%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSD 42
          S + A SG+   + R+++   NIAN+ T G      
Sbjct: 2  SFNTAISGINAANKRLEVAGNNIANSGTIGFKSSRA 37


>gi|148380596|ref|YP_001255137.1| flagellar basal body rod protein [Clostridium botulinum A str. ATCC
           3502]
 gi|153932501|ref|YP_001384883.1| flagellar basal body rod protein FlgG [Clostridium botulinum A str.
           ATCC 19397]
 gi|153936688|ref|YP_001388352.1| flagellar basal body rod protein FlgG [Clostridium botulinum A str.
           Hall]
 gi|153938096|ref|YP_001391939.1| flagellar basal body rod protein FlgG [Clostridium botulinum F str.
           Langeland]
 gi|148290080|emb|CAL84199.1| putative flagellar basal-body rod protein [Clostridium botulinum A
           str. ATCC 3502]
 gi|152928545|gb|ABS34045.1| flagellar basal body rod protein [Clostridium botulinum A str. ATCC
           19397]
 gi|152932602|gb|ABS38101.1| flagellar basal body rod protein [Clostridium botulinum A str.
           Hall]
 gi|152933992|gb|ABS39490.1| flagellar basal body rod protein [Clostridium botulinum F str.
           Langeland]
 gi|295319959|gb|ADG00337.1| flagellar basal body rod protein [Clostridium botulinum F str.
           230613]
 gi|322806968|emb|CBZ04538.1| flagellar basal-body rod protein FlgF [Clostridium botulinum H04402
           065]
          Length = 255

 Score = 45.2 bits (105), Expect = 0.003,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 21/45 (46%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
               ++  NVNV  E  +M  T R +  N + ++   + +  T++
Sbjct: 205 RQNSLEKSNVNVTNEMVNMLTTMRSFETNQKIVQSIDETLGKTVN 249



 Score = 34.5 bits (77), Expect = 5.0,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 26/60 (43%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I S + A SG+    A+   IS N++NA T G    +  +++      E      G + 
Sbjct: 1  MIRSLYTAVSGMISLEAKQDTISSNLSNASTVGYKSTNLAFKKFEDVLMENYDKKLGNKN 60


>gi|188576757|ref|YP_001913686.1| flagellar basal body rod protein FlgF [Xanthomonas oryzae pv.
           oryzae PXO99A]
 gi|188576949|ref|YP_001913878.1| flagellar basal body rod protein FlgF [Xanthomonas oryzae pv.
           oryzae PXO99A]
 gi|188521209|gb|ACD59154.1| flagellar basal-body rod protein FlgF [Xanthomonas oryzae pv.
           oryzae PXO99A]
 gi|188521401|gb|ACD59346.1| flagellar basal-body rod protein FlgF [Xanthomonas oryzae pv.
           oryzae PXO99A]
          Length = 230

 Score = 45.2 bits (105), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/112 (16%), Positives = 38/112 (33%)

Query: 22  MQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGH 81
           M+I S+   +    G+ P +     K    +             +    +   + F    
Sbjct: 116 MEIGSDGSISIIPQGEGPQTMAIVGKMKVVDAPADRLTRRPDGLMRNTSTDPAQAFAVAT 175

Query: 82  PVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
                SG+++  NV+      +M +  R +   ++ IK   D   +   LLR
Sbjct: 176 GKTINSGMLEGSNVDAAGALVEMIQLQRQFEMQVKIIKNGDDNAQSANSLLR 227


>gi|134283656|ref|ZP_01770355.1| flagellar basal body protein FlaE [Burkholderia pseudomallei 305]
 gi|134245065|gb|EBA45160.1| flagellar basal body protein FlaE [Burkholderia pseudomallei 305]
          Length = 404

 Score = 45.2 bits (105), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/83 (15%), Positives = 28/83 (33%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +    +   G  +  +        +      +        ++  NV++  +   +    
Sbjct: 322 FNNPNGLVNVGNNQYVESAASGVPQISAPGSTNHGTLQGSALENSNVDLTSQLVKLITAQ 381

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
           R Y AN QTIK    +  T ++L
Sbjct: 382 RNYQANAQTIKTQQTVDQTLINL 404


>gi|89075495|ref|ZP_01161906.1| flagellar hook protein [Photobacterium sp. SKA34]
 gi|89048767|gb|EAR54338.1| flagellar hook protein [Photobacterium sp. SKA34]
          Length = 467

 Score = 45.2 bits (105), Expect = 0.003,   Method: Composition-based stats.
 Identities = 16/104 (15%), Positives = 37/104 (35%)

Query: 28  NIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANAS 87
           NI  + + G            +S E+ +   GG               +   G   +  S
Sbjct: 363 NILASYSNGKDIVVGRVALARVSNEQGLAQLGGTLWNTTQESGQAIWGDASQGSFGSVKS 422

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           G ++  N+++  E  D+    R + A+ + +  ++ +    L +
Sbjct: 423 GTLEQSNIDMTQELVDLITAQRNFQASSRALDVNNQLQQNILQI 466



 Score = 41.4 bits (95), Expect = 0.041,   Method: Composition-based stats.
 Identities = 14/38 (36%), Positives = 17/38 (44%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          S +IA SGL      +   S NIANA T G       +
Sbjct: 2  SMNIALSGLGAAQKDLNTTSNNIANANTFGFKESRAEF 39


>gi|229058387|ref|ZP_04196771.1| Flagellar hook protein flgE [Bacillus cereus AH603]
 gi|228719896|gb|EEL71486.1| Flagellar hook protein flgE [Bacillus cereus AH603]
          Length = 407

 Score = 45.2 bits (105), Expect = 0.003,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 24/43 (55%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV++ VE  D+    R +  N + IK S +++   ++L+R
Sbjct: 365 EGANVDLSVEFVDLMLYQRGFQGNAKVIKISDEVLNEVVNLIR 407



 Score = 37.9 bits (86), Expect = 0.48,   Method: Composition-based stats.
 Identities = 13/69 (18%), Positives = 30/69 (43%), Gaps = 6/69 (8%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I + + + +G+      + + S NIANA+T G        ++K +  + + + S G + 
Sbjct: 1  MIKALYTSITGMNATQNALSVTSNNIANAQTVG------YKKQKAMFDDLLYNNSIGAKA 54

Query: 64 KKIGVDQST 72
                 + 
Sbjct: 55 DDKYAGTNP 63


>gi|284041493|ref|YP_003391833.1| flagellar hook-associated protein FlgK [Conexibacter woesei DSM
           14684]
 gi|283945714|gb|ADB48458.1| flagellar hook-associated protein FlgK [Conexibacter woesei DSM
           14684]
          Length = 443

 Score = 45.2 bits (105), Expect = 0.003,   Method: Composition-based stats.
 Identities = 9/37 (24%), Positives = 18/37 (48%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            V+   E  +M    R Y A+ +T+    +M+ T ++
Sbjct: 400 GVSPDEEMTNMIRFQRGYQASARTMSTLDEMLDTLIN 436



 Score = 34.8 bits (78), Expect = 3.9,   Method: Composition-based stats.
 Identities = 10/60 (16%), Positives = 19/60 (31%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
                +  GL      +     N+ANA T G +     +   +        G+ G+  +
Sbjct: 6  FMGLQTSLRGLIAHQQALNTTGHNVANANTPGFSRQEAIFGAMSALRLPTNSGTTGLGAQ 65


>gi|229917023|ref|YP_002885669.1| flagellar basal body rod protein [Exiguobacterium sp. AT1b]
 gi|229468452|gb|ACQ70224.1| flagellar basal body rod protein [Exiguobacterium sp. AT1b]
          Length = 257

 Score = 45.2 bits (105), Expect = 0.003,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 22/47 (46%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NVN+    AD+  T R + AN + ++         +++ R
Sbjct: 209 QGFIEEANVNLDQTMADLMMTYRQFEANQKVVQAYDKSAERAIEIAR 255


>gi|289548727|ref|YP_003473715.1| fagellar hook-basal body protein [Thermocrinis albus DSM 14484]
 gi|289182344|gb|ADC89588.1| fagellar hook-basal body protein [Thermocrinis albus DSM 14484]
          Length = 241

 Score = 45.2 bits (105), Expect = 0.003,   Method: Composition-based stats.
 Identities = 10/58 (17%), Positives = 19/58 (32%)

Query: 73  FVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           F     P        G ++  NVN + E   + E +R +      I+    +     +
Sbjct: 181 FRGRATPSERFKVLQGFLEDANVNPIEELVKLIEAHRAHEIYTNLIRSLDQLQEKITN 238


>gi|224419257|ref|ZP_03657263.1| flagellar hook protein FlgE [Helicobacter canadensis MIT 98-5491]
 gi|253826972|ref|ZP_04869857.1| flagellar hook protein [Helicobacter canadensis MIT 98-5491]
 gi|313142759|ref|ZP_07804952.1| flagellar hook protein [Helicobacter canadensis MIT 98-5491]
 gi|253510378|gb|EES89037.1| flagellar hook protein [Helicobacter canadensis MIT 98-5491]
 gi|313131790|gb|EFR49407.1| flagellar hook protein [Helicobacter canadensis MIT 98-5491]
          Length = 751

 Score = 45.2 bits (105), Expect = 0.003,   Method: Composition-based stats.
 Identities = 12/85 (14%), Positives = 30/85 (35%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +  E +  SG     +        +     G   +  +  ++  N ++      +    
Sbjct: 667 FANYEGLQESGSNLFAESPNSGGPTIGTAGSGGRASIQASKLEMSNSDLSRGLTQLIVVQ 726

Query: 109 RLYMANLQTIKQSHDMMTTTLDLLR 133
           R + A+ ++I  S  ++ T L L +
Sbjct: 727 RGFQASSKSITTSDQILNTLLGLKQ 751



 Score = 37.5 bits (85), Expect = 0.58,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 16/41 (39%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          ++ S     SG+      + + S NIAN  T G       +
Sbjct: 1  MLRSLWSGVSGMQAHQVALDVESNNIANVNTNGFKYSRADF 41


>gi|170758901|ref|YP_001787959.1| flagellar basal body rod protein FlgG [Clostridium botulinum A3
           str. Loch Maree]
 gi|169405890|gb|ACA54301.1| flagellar basal body rod protein [Clostridium botulinum A3 str.
           Loch Maree]
          Length = 255

 Score = 45.2 bits (105), Expect = 0.003,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 21/45 (46%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
               ++  NVNV  E  +M  T R +  N + ++   + +  T++
Sbjct: 205 RQNSLEKSNVNVTNEMVNMLTTMRSFETNQKIVQSIDETLGKTVN 249


>gi|90579910|ref|ZP_01235718.1| putative flagellar basal-body rod protein FlgF [Vibrio angustum
           S14]
 gi|90438795|gb|EAS63978.1| putative flagellar basal-body rod protein FlgF [Vibrio angustum
           S14]
          Length = 249

 Score = 45.2 bits (105), Expect = 0.003,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 24/47 (51%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G+++  NVN + E   M +  R +   ++ +K + +M   +  L+R
Sbjct: 201 KGMLEGSNVNAVSEMTSMIDLQRHFEMQVKLMKTAEEMDKASSSLMR 247


>gi|327478809|gb|AEA82119.1| flagellar basal body FlaE domain-containing protein [Pseudomonas
           stutzeri DSM 4166]
          Length = 396

 Score = 45.2 bits (105), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/82 (18%), Positives = 29/82 (35%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
               E +    G    +     +  +     G     ASG ++  NV++  +   + E  
Sbjct: 313 FVNAEGLKNISGTAWTETAASGAAMLGAPGVGQYGTLASGALESSNVDLTQQLVGLMEGQ 372

Query: 109 RLYMANLQTIKQSHDMMTTTLD 130
           R Y AN Q I  + ++     +
Sbjct: 373 RNYQANTQVISTNKELTQVLFN 394



 Score = 36.4 bits (82), Expect = 1.5,   Method: Composition-based stats.
 Identities = 12/38 (31%), Positives = 20/38 (52%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          S +IA +GL+  + ++  I  NIAN+ T G       +
Sbjct: 2  SFNIALTGLSAVNEQLNTIGNNIANSGTVGFKSSRTNF 39


>gi|188580157|ref|YP_001923602.1| hypothetical protein Mpop_0889 [Methylobacterium populi BJ001]
 gi|179343655|gb|ACB79067.1| protein of unknown function DUF1078 domain protein
           [Methylobacterium populi BJ001]
          Length = 460

 Score = 45.2 bits (105), Expect = 0.003,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 24/46 (52%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             V+  N ++  E + M  T + Y AN + +  +  M++  L+++R
Sbjct: 415 ANVEQSNTDIAAEFSKMIVTQQAYSANTRVMSTAQTMISDLLNVIR 460



 Score = 37.5 bits (85), Expect = 0.56,   Method: Composition-based stats.
 Identities = 15/37 (40%), Positives = 21/37 (56%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDT 38
            + ++   A SGL  QS  +  IS NIAN++TTG  
Sbjct: 1  MDVFSALQTAVSGLKAQSFSLSNISGNIANSQTTGYK 37


>gi|168182722|ref|ZP_02617386.1| flagellar basal body rod protein [Clostridium botulinum Bf]
 gi|237796078|ref|YP_002863630.1| flagellar basal body rod protein FlgG [Clostridium botulinum Ba4
           str. 657]
 gi|182674102|gb|EDT86063.1| flagellar basal body rod protein [Clostridium botulinum Bf]
 gi|229264182|gb|ACQ55215.1| flagellar basal body rod protein [Clostridium botulinum Ba4 str.
           657]
          Length = 255

 Score = 45.2 bits (105), Expect = 0.003,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 21/45 (46%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
               ++  NVNV  E  +M  T R +  N + ++   + +  T++
Sbjct: 205 RQNSLEKSNVNVTNEMVNMLTTMRSFETNQKIVQSIDETLGKTVN 249



 Score = 34.5 bits (77), Expect = 5.3,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 26/60 (43%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I S + A SG+    A+   IS N++NA T G    +  +++      E      G + 
Sbjct: 1  MIRSLYTAVSGMISLEAKQDTISSNLSNASTVGYKSTNLAFKKFEDVLMENYDKKLGNKN 60


>gi|28869141|ref|NP_791760.1| flagellar hook protein FlgE [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|28852381|gb|AAO55455.1| flagellar hook protein FlgE [Pseudomonas syringae pv. tomato str.
           DC3000]
          Length = 586

 Score = 45.2 bits (105), Expect = 0.003,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 17/41 (41%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           ++  NV +  E   + +    Y AN + I     +M T + 
Sbjct: 544 LEGSNVVLADELIALIQAQTAYQANSKAISTEATVMQTLIQ 584



 Score = 34.1 bits (76), Expect = 7.2,   Method: Composition-based stats.
 Identities = 11/36 (30%), Positives = 18/36 (50%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSD 42
          S + A SG+   + R+++   NIAN+ T G      
Sbjct: 2  SFNTAISGINAANKRLEVAGNNIANSGTIGFKSSRA 37


>gi|302343763|ref|YP_003808292.1| flagellar hook-associated protein FlgK [Desulfarculus baarsii DSM
           2075]
 gi|301640376|gb|ADK85698.1| flagellar hook-associated protein FlgK [Desulfarculus baarsii DSM
           2075]
          Length = 574

 Score = 45.2 bits (105), Expect = 0.003,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 20/42 (47%)

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
              V++  E   M +  R Y    Q I+ S +++ T + +++
Sbjct: 533 MSGVSLDEEMVRMIQFQRSYQMAAQMIQVSDELLQTLIGIVK 574



 Score = 40.6 bits (93), Expect = 0.066,   Method: Composition-based stats.
 Identities = 14/103 (13%), Positives = 33/103 (32%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M  + +   I+   L     ++ ++S N+AN  T G +        +   +    +   G
Sbjct: 1   MPGIYSMMDISRWALNASVDQLDVVSHNVANVNTPGYSRQVAVLATRNPQYSSKGYFGNG 60

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETAD 103
           V+   +       +      +    +    K   +  L   A+
Sbjct: 61  VQTTTVMQYVDKLLLGRLTANTSDTSYYSAKLSQLTRLEALAN 103


>gi|330953722|gb|EGH53982.1| flagellar hook protein FlgE [Pseudomonas syringae Cit 7]
          Length = 162

 Score = 45.2 bits (105), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/119 (18%), Positives = 44/119 (36%), Gaps = 6/119 (5%)

Query: 13  SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQST 72
           SG+ V S      S N+    T G +         + +  + +  +GG   ++       
Sbjct: 49  SGMNVDS------SGNLFATYTNGKSQVIGQTSLTSFANVQGLAQAGGTNWRETFASGVP 102

Query: 73  FVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
                  G         ++  NV++ +E  ++ +    Y AN +TI     +M TT+ +
Sbjct: 103 VSGAPQSGTLGYITGQALEESNVDLTMELVNLIKAQSNYQANAKTISTQSTIMQTTIQM 161


>gi|205375362|ref|ZP_03228152.1| flagellar basal-body rod protein [Bacillus coahuilensis m4-4]
          Length = 270

 Score = 45.2 bits (105), Expect = 0.003,   Method: Composition-based stats.
 Identities = 10/53 (18%), Positives = 20/53 (37%), Gaps = 1/53 (1%)

Query: 82  PVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD-LLR 133
                 G ++  NVN      DM    R + AN + ++     +   ++ + R
Sbjct: 217 QFQTVQGFLENSNVNESQTMTDMMTAYRSFEANQKLLQAYDKSLDKAVNEIGR 269



 Score = 41.0 bits (94), Expect = 0.052,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 19/39 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSD 42
          ++   + A SG+  Q  + + ++ N+ANA T G      
Sbjct: 1  MLRGLYTAASGMIAQQRKTETLANNLANANTPGFKADQT 39


>gi|154252984|ref|YP_001413808.1| hypothetical protein Plav_2542 [Parvibaculum lavamentivorans DS-1]
 gi|154156934|gb|ABS64151.1| protein of unknown function DUF1078 domain protein [Parvibaculum
           lavamentivorans DS-1]
          Length = 454

 Score = 45.2 bits (105), Expect = 0.003,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 23/43 (53%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  NV++  E + +  T + Y A  + +  + +++  TL++ R
Sbjct: 412 EASNVDIADEFSKLIVTQQAYTAGTRIVTTADELIRETLNMKR 454



 Score = 37.9 bits (86), Expect = 0.49,   Method: Composition-based stats.
 Identities = 22/94 (23%), Positives = 33/94 (35%), Gaps = 2/94 (2%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
               S   A +G+  QS+ +  IS+NIAN++T G       ++    +     H  G V
Sbjct: 1  MSFFGSMTTAITGIRAQSSALGHISDNIANSQTIGFKRTDTNFQDIVTASTSRNHLPGAV 60

Query: 62 RVKK--IGVDQSTFVEEFDPGHPVANASGIVKYP 93
                    Q +      P H   N SG     
Sbjct: 61 LAAPSFTNNVQGSIDASEVPTHMAINGSGFFVVS 94


>gi|169826608|ref|YP_001696766.1| flagellar hook-basal body complex protein [Lysinibacillus
           sphaericus C3-41]
 gi|168991096|gb|ACA38636.1| Flagellar hook-basal body complex protein [Lysinibacillus
           sphaericus C3-41]
          Length = 280

 Score = 45.2 bits (105), Expect = 0.003,   Method: Composition-based stats.
 Identities = 7/45 (15%), Positives = 17/45 (37%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
               ++  NV+      D+    R + AN + ++     M   ++
Sbjct: 231 RQNFLEGSNVDSGRAMTDLMTAYRAFEANQKVLQAYDRSMEKAVN 275



 Score = 38.7 bits (88), Expect = 0.28,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 25/67 (37%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  L    +   +G+  Q  R +++S N+ANA T G        R         +  +  
Sbjct: 1  MISLFKGFYTVATGMITQQRRTELLSNNLANANTPGFKADQSTIRSFPDMLMSSIGKTNA 60

Query: 61 VRVKKIG 67
             ++ G
Sbjct: 61 PANQQAG 67


>gi|153834440|ref|ZP_01987107.1| flagellar basal-body rod protein FlgF [Vibrio harveyi HY01]
 gi|156973588|ref|YP_001444495.1| flagellar basal body rod protein FlgF [Vibrio harveyi ATCC
           BAA-1116]
 gi|269961600|ref|ZP_06175962.1| flagellar basal-body rod protein FlgF [Vibrio harveyi 1DA3]
 gi|148869136|gb|EDL68168.1| flagellar basal-body rod protein FlgF [Vibrio harveyi HY01]
 gi|156525182|gb|ABU70268.1| hypothetical protein VIBHAR_01291 [Vibrio harveyi ATCC BAA-1116]
 gi|269833641|gb|EEZ87738.1| flagellar basal-body rod protein FlgF [Vibrio harveyi 1DA3]
          Length = 249

 Score = 45.2 bits (105), Expect = 0.003,   Method: Composition-based stats.
 Identities = 10/61 (16%), Positives = 29/61 (47%)

Query: 73  FVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
             + ++    ++  +G ++  NVN + E   + +  R +   ++ +  + +M  ++  LL
Sbjct: 187 PNQPYEADGSISIQTGAIEGSNVNAVGEMTALIDLQRQFEMQVKMMSTAEEMDKSSDSLL 246

Query: 133 R 133
           R
Sbjct: 247 R 247


>gi|213161842|ref|ZP_03347552.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Typhi str. E00-7866]
          Length = 232

 Score = 45.2 bits (105), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 21/41 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I+S  IA +GL  Q   M +I+ N+AN  T G       +
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVF 41


>gi|258621050|ref|ZP_05716084.1| flagellar basal-body rod protein FlgF [Vibrio mimicus VM573]
 gi|258625278|ref|ZP_05720186.1| flagellar basal-body rod protein FlgF [Vibrio mimicus VM603]
 gi|262166281|ref|ZP_06034018.1| flagellar basal-body rod protein FlgF [Vibrio mimicus VM223]
 gi|262170826|ref|ZP_06038504.1| flagellar basal-body rod protein FlgF [Vibrio mimicus MB-451]
 gi|258582451|gb|EEW07292.1| flagellar basal-body rod protein FlgF [Vibrio mimicus VM603]
 gi|258586438|gb|EEW11153.1| flagellar basal-body rod protein FlgF [Vibrio mimicus VM573]
 gi|261891902|gb|EEY37888.1| flagellar basal-body rod protein FlgF [Vibrio mimicus MB-451]
 gi|262025997|gb|EEY44665.1| flagellar basal-body rod protein FlgF [Vibrio mimicus VM223]
          Length = 249

 Score = 45.2 bits (105), Expect = 0.003,   Method: Composition-based stats.
 Identities = 12/63 (19%), Positives = 29/63 (46%)

Query: 71  STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           +    +F+    V   +G ++  NVN + E   + +  R +   ++ +  + +M  ++  
Sbjct: 185 TDPNTQFEADASVKILTGALEGSNVNAIGEMTSLIDLQRQFEMQVKMMSTAEEMDKSSDS 244

Query: 131 LLR 133
           LLR
Sbjct: 245 LLR 247


>gi|226950051|ref|YP_002805142.1| flagellar basal body rod protein [Clostridium botulinum A2 str.
           Kyoto]
 gi|226842618|gb|ACO85284.1| flagellar basal body rod protein [Clostridium botulinum A2 str.
           Kyoto]
          Length = 255

 Score = 45.2 bits (105), Expect = 0.003,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 21/45 (46%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
               ++  NVNV  E  +M  T R +  N + ++   + +  T++
Sbjct: 205 RQNSLEKSNVNVTNEMVNMLTTMRSFETNQKIVQSIDETLGKTVN 249


>gi|291334315|gb|ADD93976.1| hypothetical protein Rsph17025_1668 [uncultured marine bacterium
           MedDCM-OCT-S09-C247]
          Length = 251

 Score = 44.9 bits (104), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 25/57 (43%)

Query: 76  EFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
             DP        G ++  NVN + E     +  R +  N++ IK++ D+ +    L+
Sbjct: 191 VPDPDQTGKFGQGYLESSNVNAIEELIRNIDMQRQFEINVKLIKKASDLDSAGTKLM 247


>gi|27381969|ref|NP_773498.1| flagellar hook protein FlgE [Bradyrhizobium japonicum USDA 110]
 gi|27355139|dbj|BAC52123.1| flagellar hook protein [Bradyrhizobium japonicum USDA 110]
          Length = 410

 Score = 44.9 bits (104), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 25/48 (52%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            SG ++  NV++  E   M E  R + AN ++ +   D++   ++L R
Sbjct: 363 QSGALEDSNVDLADELTGMIEAQRGFTANSKSFQTGADLLDVVVNLKR 410



 Score = 40.6 bits (93), Expect = 0.066,   Method: Composition-based stats.
 Identities = 21/101 (20%), Positives = 33/101 (32%), Gaps = 2/101 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-- 59
             L        SG++ QS ++  +S+NIAN  TTG    S  +    +      + SG  
Sbjct: 1   MSLYGVMRTGVSGMSAQSNKLSTVSDNIANVNTTGYKRASTEFSSLILKSGSGNYDSGAV 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVE 100
              V+    D                 +G     N N   +
Sbjct: 61  ETTVRYAISDAGHTQFTTSTTDLAVQGNGFFVVSNANNTQQ 101


>gi|289679028|ref|ZP_06499918.1| flagellar hook protein FlgE [Pseudomonas syringae pv. syringae FF5]
          Length = 159

 Score = 44.9 bits (104), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/119 (18%), Positives = 44/119 (36%), Gaps = 6/119 (5%)

Query: 13  SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQST 72
           SG+ V S      S N+    T G +         + +  + +  +GG   ++       
Sbjct: 46  SGMNVDS------SGNLFATYTNGKSQVIGQTSLTSFANVQGLAQAGGTNWRETFASGVP 99

Query: 73  FVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
                  G         ++  NV++ +E  ++ +    Y AN +TI     +M TT+ +
Sbjct: 100 VSGAPQSGTLGYITGQALEESNVDLTMELVNLIKAQSNYQANAKTISTQSTIMQTTIQM 158


>gi|161777623|ref|YP_427619.2| flagellar hook protein FlgE [Rhodospirillum rubrum ATCC 11170]
          Length = 460

 Score = 44.9 bits (104), Expect = 0.003,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 28/65 (43%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  L +S ++A S +  QS+ +  IS N+AN+ T G    +  +           + +G 
Sbjct: 1  MSSLSSSLNVAVSAMNAQSSSVSAISNNLANSSTIGYKTSNASFYSLVTGTGSTSNFTGA 60

Query: 61 VRVKK 65
            V  
Sbjct: 61 GVVAS 65


>gi|42522141|ref|NP_967521.1| FlgK, flagellar hook-associated protein [Bdellovibrio bacteriovorus
           HD100]
 gi|39574672|emb|CAE78514.1| FlgK, flagellar hook-associated protein [Bdellovibrio bacteriovorus
           HD100]
          Length = 469

 Score = 44.9 bits (104), Expect = 0.003,   Method: Composition-based stats.
 Identities = 24/116 (20%), Positives = 45/116 (38%), Gaps = 3/116 (2%)

Query: 21  RMQIISENIANARTTGDTPGSDPYRRKTISF-EEVMHGSGGVRVKKIGVDQSTFVEEFDP 79
           R+   ++  A    T     S    R+ +      +      +V +IG      V+  + 
Sbjct: 353 RIATGAQPGAAGDNTVANVISALQYRQVMDGGTSTLDDYYSTQVGQIGAVTQRAVKAQES 412

Query: 80  GHPVANASGIVKYP--NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
              V +    ++     V++  ET  M E  + Y A+ + IK + +M  T L+L R
Sbjct: 413 QKNVISQLTNIRESISGVSLDEETTKMIEFQKTYDASARLIKTADEMFDTVLNLKR 468



 Score = 34.5 bits (77), Expect = 5.3,   Method: Composition-based stats.
 Identities = 15/103 (14%), Positives = 34/103 (33%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M  + A        L      +Q +  NIAN  T G +      +  T   E  +    G
Sbjct: 1   MSKISAMMDTGKRSLMNSQTALQTVGHNIANKSTEGFSRQRVELQTNTPITEGNLQIGMG 60

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETAD 103
            R   +    + ++E+      ++      +   ++ + +  +
Sbjct: 61  ARAGVVTRVNNPWLEKQIQREGMSMGFQDSRADALSRVEQIYN 103


>gi|237757071|ref|ZP_04585515.1| flagellar hook-associated protein FlgK [Sulfurihydrogenibium
           yellowstonense SS-5]
 gi|237690770|gb|EEP59934.1| flagellar hook-associated protein FlgK [Sulfurihydrogenibium
           yellowstonense SS-5]
          Length = 475

 Score = 44.9 bits (104), Expect = 0.003,   Method: Composition-based stats.
 Identities = 16/99 (16%), Positives = 33/99 (33%)

Query: 35  TGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPN 94
                  + Y     S     + S  V +      +     E +     A    +     
Sbjct: 377 KSSLNDPNNYDIIKNSKFSEYYNSQLVAIISSESSRIKTQMENNQFLYDAITEKMKSLTG 436

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           VN+  E  ++ +  R Y A  + I  + ++M T L++ +
Sbjct: 437 VNMDEELINLTKLQRSYQAAARIITVTDELMQTILNIGK 475


>gi|220903670|ref|YP_002478982.1| hypothetical protein Ddes_0391 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|219867969|gb|ACL48304.1| protein of unknown function DUF1078 domain protein [Desulfovibrio
           desulfuricans subsp. desulfuricans str. ATCC 27774]
          Length = 265

 Score = 44.9 bits (104), Expect = 0.003,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 19/45 (42%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             G  +  NV V+ E  +M E  R + A  + ++ S  +     +
Sbjct: 214 EQGFTEAANVEVVPEMVNMIEVQRQFEAYQKVMQTSDTLDRAATE 258


>gi|254519398|ref|ZP_05131454.1| flagellar basal body rod protein FlgG [Clostridium sp. 7_2_43FAA]
 gi|226913147|gb|EEH98348.1| flagellar basal body rod protein FlgG [Clostridium sp. 7_2_43FAA]
          Length = 260

 Score = 44.9 bits (104), Expect = 0.003,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 20/45 (44%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             G ++  NVN+  E  +M  T R +  N + ++   + +    +
Sbjct: 210 TQGALEGSNVNISNEMVNMITTMRNFETNQKIVQTIDETLGKAAN 254


>gi|213421404|ref|ZP_03354470.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Typhi str. E01-6750]
          Length = 197

 Score = 44.9 bits (104), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 21/41 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I+S  IA +GL  Q   M +I+ N+AN  T G       +
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVF 41


>gi|325927876|ref|ZP_08189100.1| flagellar basal-body rod protein FlgF, proteobacterial [Xanthomonas
           perforans 91-118]
 gi|325541716|gb|EGD13234.1| flagellar basal-body rod protein FlgF, proteobacterial [Xanthomonas
           perforans 91-118]
          Length = 243

 Score = 44.9 bits (104), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/112 (16%), Positives = 38/112 (33%)

Query: 22  MQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGH 81
           M+I S+   +    G+ P +     K    +             +    +   + F    
Sbjct: 129 MEIGSDGSISIIPQGEGPQTMAIVGKMKVVDAPADRLTRRPDGLMRNTSTDPAQAFAVAT 188

Query: 82  PVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
                SG+++  NV+      +M +  R +   ++ IK   D   +   LLR
Sbjct: 189 GKTVNSGMLEGSNVDAAGALVEMIQLQRQFEMQVKIIKNGDDNAQSANSLLR 240


>gi|58426791|gb|AAW75828.1| flagellar protein [Xanthomonas oryzae pv. oryzae KACC10331]
          Length = 280

 Score = 44.9 bits (104), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/112 (16%), Positives = 38/112 (33%)

Query: 22  MQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGH 81
           M+I S+   +    G+ P +     K    +             +    +   + F    
Sbjct: 166 MEIGSDGSISIIPQGEGPQTMAIVGKMKVVDAPADRLTRRPDGLMRNTSTDPAQAFTVAT 225

Query: 82  PVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
                SG+++  NV+      +M +  R +   ++ IK   D   +   LLR
Sbjct: 226 GKTINSGMLEGSNVDAAGALVEMIQLQRQFEMQVKIIKNGDDNAQSANSLLR 277


>gi|94312666|ref|YP_585875.1| flagellar basal body rod protein FlgB [Cupriavidus metallidurans
           CH34]
 gi|93356518|gb|ABF10606.1| flagellar basal body rod protein FlgB [Cupriavidus metallidurans
           CH34]
 gi|222834412|gb|EEE72889.1| predicted protein [Populus trichocarpa]
          Length = 134

 Score = 44.9 bits (104), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 41/133 (30%), Gaps = 3/133 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD L A+       L++++ R  +I+ NIA+A T G       +        E    S G
Sbjct: 1   MDKLDAAFRFQQDALSLRTQRQSVIASNIAHADTPGYKARDFDFASTLAQSVERGQRSEG 60

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVA---NASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
             +    V           GH +         +    V +  E     +    Y A L  
Sbjct: 61  TSLSTTSVRHLPGQAPTSTGHELDYRIPLQSSIDGNTVEMDTERVAFADNTVHYEAGLTV 120

Query: 118 IKQSHDMMTTTLD 130
           +      M   + 
Sbjct: 121 MSSKIKTMLAAIQ 133


>gi|257871307|ref|ZP_05650960.1| flagellar hook-basal body complex protein [Enterococcus gallinarum
           EG2]
 gi|257805471|gb|EEV34293.1| flagellar hook-basal body complex protein [Enterococcus gallinarum
           EG2]
          Length = 233

 Score = 44.9 bits (104), Expect = 0.004,   Method: Composition-based stats.
 Identities = 10/50 (20%), Positives = 24/50 (48%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           +      G ++  NV+V  E   M +T+R + AN + +  ++  +   ++
Sbjct: 179 NAPVIQQGALEQANVSVADEMVAMIQTSREFEANQKVLSSTNQTLQKAVN 228


>gi|220917700|ref|YP_002493004.1| flagellar basal-body rod protein FlgF [Anaeromyxobacter
           dehalogenans 2CP-1]
 gi|219955554|gb|ACL65938.1| flagellar basal-body rod protein FlgF [Anaeromyxobacter
           dehalogenans 2CP-1]
          Length = 235

 Score = 44.9 bits (104), Expect = 0.004,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 22/52 (42%)

Query: 82  PVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             A  SG ++  N   L  +  +    R Y A+LQ I+    +    +++ R
Sbjct: 182 EGAVRSGELELGNAGALEASIQLVSAQRAYEASLQAIQTYRQLDQRAVEVAR 233



 Score = 33.7 bits (75), Expect = 8.0,   Method: Composition-based stats.
 Identities = 10/87 (11%), Positives = 27/87 (31%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +    +++  G   ++ ++  +++N+ANA+T G       +                   
Sbjct: 1  MADGIYVSMCGAVARAEQLDAVADNLANAQTPGFKAARPAFESFLAPGAAQDKRYAAAVA 60

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIV 90
            I +         +    V  A   +
Sbjct: 61 TGIDLRPGPTQRTGNALDVVPEAGMFL 87


>gi|240144761|ref|ZP_04743362.1| flagellar basal-body rod protein FlgG [Roseburia intestinalis
           L1-82]
 gi|257203282|gb|EEV01567.1| flagellar basal-body rod protein FlgG [Roseburia intestinalis
           L1-82]
 gi|291534609|emb|CBL07721.1| fagellar hook-basal body proteins [Roseburia intestinalis M50/1]
 gi|291540626|emb|CBL13737.1| fagellar hook-basal body proteins [Roseburia intestinalis XB6B4]
          Length = 264

 Score = 44.9 bits (104), Expect = 0.004,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 21/45 (46%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             G ++  N+NV+ E  +M   +R + A  + I    + +   ++
Sbjct: 215 TQGCIESSNINVVSEMVNMITISRAFQAGQKVINAVDETLDKAVN 259



 Score = 34.1 bits (76), Expect = 6.3,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 20/40 (50%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDP 43
          ++   + A +G+  +  R+ I+S N+ANA T G       
Sbjct: 1  MVKGLYTAYTGMINEQNRLDILSNNLANADTNGYKKEGAT 40


>gi|91776315|ref|YP_546071.1| flagellar hook-associated protein FlgK [Methylobacillus flagellatus
           KT]
 gi|91710302|gb|ABE50230.1| Flagellar hook-associated protein [Methylobacillus flagellatus KT]
          Length = 645

 Score = 44.9 bits (104), Expect = 0.004,   Method: Composition-based stats.
 Identities = 14/104 (13%), Positives = 28/104 (26%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +    +I  + L      +     NIANA T G +                 +   G +V
Sbjct: 1   MSNIFNIGKTALNAAQVGISTTGHNIANANTEGYSRQVIVQSAGQAQAWGFGYLGNGTQV 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
             +    +  +           +    +  N+N +       E 
Sbjct: 61  DTVKRVYNELLSRQISNSQSIASGINTQLSNINHINNMLADAEA 104



 Score = 36.0 bits (81), Expect = 1.6,   Method: Composition-based stats.
 Identities = 14/127 (11%), Positives = 37/127 (29%), Gaps = 2/127 (1%)

Query: 7   SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
           S  ++ +        +   + N A          +    +  +       G+    V  +
Sbjct: 518 SFSLSGAPADGDQFTIAATTSNAAGDNRNALQLAALQNTKTMLGGTASYQGTFNQLVSYV 577

Query: 67  GVDQSTFVEEFDPGHPVANASGIVKY--PNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           G             + +   S   +     VN+  E  ++    + Y A  + ++ +  +
Sbjct: 578 GNRTRELQVTGAAENTLLAQSITAQQGESGVNLDEEAVNLIRYQQAYQAAGKVMQIASTL 637

Query: 125 MTTTLDL 131
             T L +
Sbjct: 638 FETVLSI 644


>gi|330899402|gb|EGH30821.1| flagellar hook protein FlgE [Pseudomonas syringae pv. japonica str.
           M301072PT]
          Length = 93

 Score = 44.9 bits (104), Expect = 0.004,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 23/42 (54%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           ++  NV++ +E  ++ +    Y AN +TI     +M TT+ +
Sbjct: 51  LEESNVDLTMELVNLIKAQSNYQANAKTISTQSTIMQTTIQM 92


>gi|296445196|ref|ZP_06887156.1| fagellar hook-basal body protein [Methylosinus trichosporium OB3b]
 gi|296257370|gb|EFH04437.1| fagellar hook-basal body protein [Methylosinus trichosporium OB3b]
          Length = 413

 Score = 44.9 bits (104), Expect = 0.004,   Method: Composition-based stats.
 Identities = 24/137 (17%), Positives = 47/137 (34%), Gaps = 5/137 (3%)

Query: 1   MDYLIASAHIA---NSGLAVQSAR-MQIISENIANARTTGDTPGSDPYRRKTI-SFEEVM 55
           M  L +S  ++    +G A Q+   + + S+   N   TG              S    +
Sbjct: 277 MTQLGSSFSVSDPTINGNAAQAVASVNVDSDGTLNYVLTGGQTVPAYKIPLANVSSPSGL 336

Query: 56  HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
               G          + +V     G      S  ++   V++  + ++M    R Y AN 
Sbjct: 337 QSVSGNAFATNASSGTAYVGLPGTGSFGDIQSKSLESSTVDLATQLSNMIVAQRSYTANS 396

Query: 116 QTIKQSHDMMTTTLDLL 132
           Q  + + ++M    +L 
Sbjct: 397 QVFQVASEVMQVLNNLK 413



 Score = 35.2 bits (79), Expect = 3.2,   Method: Composition-based stats.
 Identities = 14/71 (19%), Positives = 30/71 (42%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
           + +  G+A Q++ +  +S+NIAN+ T G    +  +     S +     +GGV  +   
Sbjct: 7  FNTSVMGMAAQASALGAVSQNIANSGTVGYKDATTQFSTVLSSVQNGSDPAGGVTAQTGV 66

Query: 68 VDQSTFVEEFD 78
             +    +  
Sbjct: 67 AVTAQGNTQQT 77


>gi|313681828|ref|YP_004059566.1| flagellar hook-associated protein flgk [Sulfuricurvum kujiense
          DSM 16994]
 gi|313154688|gb|ADR33366.1| flagellar hook-associated protein FlgK [Sulfuricurvum kujiense
          DSM 16994]
          Length = 615

 Score = 44.9 bits (104), Expect = 0.004,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 23/66 (34%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  +  + HI  SGL      +     NI+NA T G T              +     GG
Sbjct: 1  MASIFNALHIGYSGLNAAQIGIDTTGHNISNAETEGYTRQRVVTAAAAPLGVDPGQRGGG 60

Query: 61 VRVKKI 66
           +V  I
Sbjct: 61 TQVTDI 66



 Score = 42.9 bits (99), Expect = 0.014,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 17/40 (42%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
             V++  E A++      Y A  + I     MMTT L + 
Sbjct: 575 SKVSIDEEMANLIRYQTSYGAAAKVITTIDQMMTTLLGIK 614


>gi|84624089|ref|YP_451461.1| flagellar basal body rod protein FlgF [Xanthomonas oryzae pv.
           oryzae MAFF 311018]
 gi|161898986|ref|YP_201213.2| flagellar basal body rod protein FlgF [Xanthomonas oryzae pv.
           oryzae KACC10331]
 gi|84368029|dbj|BAE69187.1| flagellar protein [Xanthomonas oryzae pv. oryzae MAFF 311018]
          Length = 251

 Score = 44.9 bits (104), Expect = 0.004,   Method: Composition-based stats.
 Identities = 19/112 (16%), Positives = 38/112 (33%)

Query: 22  MQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGH 81
           M+I S+   +    G+ P +     K    +             +    +   + F    
Sbjct: 137 MEIGSDGSISIIPQGEGPQTMAIVGKMKVVDAPADRLTRRPDGLMRNTSTDPAQAFTVAT 196

Query: 82  PVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
                SG+++  NV+      +M +  R +   ++ IK   D   +   LLR
Sbjct: 197 GKTINSGMLEGSNVDAAGALVEMIQLQRQFEMQVKIIKNGDDNAQSANSLLR 248


>gi|308071138|ref|YP_003872743.1| flagellar basal body rod protein [Paenibacillus polymyxa E681]
 gi|305860417|gb|ADM72205.1| Flagellar basal body rod protein [Paenibacillus polymyxa E681]
          Length = 275

 Score = 44.9 bits (104), Expect = 0.004,   Method: Composition-based stats.
 Identities = 14/50 (28%), Positives = 24/50 (48%)

Query: 82  PVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            V+  SG ++  NV++  E  DM +  R+Y    + +  S  MM    +L
Sbjct: 224 DVSVRSGYLEESNVDLAGEMTDMMQVQRMYQMAARALTSSDTMMNLANNL 273


>gi|21242726|ref|NP_642308.1| flagellar basal body rod protein FlgF [Xanthomonas axonopodis pv.
           citri str. 306]
 gi|21108202|gb|AAM36844.1| flagellar protein [Xanthomonas axonopodis pv. citri str. 306]
          Length = 251

 Score = 44.9 bits (104), Expect = 0.004,   Method: Composition-based stats.
 Identities = 19/112 (16%), Positives = 38/112 (33%)

Query: 22  MQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGH 81
           M+I S+   +    G+ P +     K    +             +    +   + F    
Sbjct: 137 MEIGSDGSISIIPQGEGPQTMAIVGKMKVVDAPADRLTRRPDGLMRNTSTDPAQAFAVAT 196

Query: 82  PVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
                SG+++  NV+      +M +  R +   ++ IK   D   +   LLR
Sbjct: 197 GKTINSGMLEGSNVDAAGALVEMIQLQRQFEMQVKIIKNGDDNAQSANSLLR 248


>gi|304392511|ref|ZP_07374451.1| flagellar basal-body rod protein FlgF [Ahrensia sp. R2A130]
 gi|303295141|gb|EFL89501.1| flagellar basal-body rod protein FlgF [Ahrensia sp. R2A130]
          Length = 250

 Score = 44.9 bits (104), Expect = 0.004,   Method: Composition-based stats.
 Identities = 17/110 (15%), Positives = 38/110 (34%), Gaps = 3/110 (2%)

Query: 26  SENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVD---QSTFVEEFDPGHP 82
           + N+A    T  + GS     + +    +     G    +IG               G  
Sbjct: 137 ALNVAAGPPTIGSDGSIVQNGQQVGAIGLYAFDPGTDPVRIGTSGILAQGAPVALVDGDA 196

Query: 83  VANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
            +   G V+  NV+ + E  ++   +R +      +++S   +   + +L
Sbjct: 197 PSVLQGYVEQANVDPVREMTNLITIHRTFDNVAAMVRKSDAALEKMMQIL 246


>gi|225159023|ref|ZP_03725333.1| protein of unknown function DUF1078 [Opitutaceae bacterium TAV2]
 gi|224802402|gb|EEG20664.1| protein of unknown function DUF1078 [Opitutaceae bacterium TAV2]
          Length = 261

 Score = 44.9 bits (104), Expect = 0.004,   Method: Composition-based stats.
 Identities = 17/133 (12%), Positives = 37/133 (27%), Gaps = 5/133 (3%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
           D   A   I  +G+  +S     IS N A +                    +        
Sbjct: 134 DSASAPIQIPTTGVQSKS-----ISSNGAVSYVDTAGVTHTVATVGLAQVADQAKLMKEG 188

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
                    +  +         A  +  ++   V++  E  +M      + AN + +  S
Sbjct: 189 GNLYDYSATTVAIGIPGSNGTGAFKTYSLELSKVDLTAELPNMITMQGSFQANARMVTVS 248

Query: 122 HDMMTTTLDLLRD 134
             +    +++ R 
Sbjct: 249 DTIFDDIVNMKRS 261


>gi|294013087|ref|YP_003546547.1| flagellar basal-body rod protein FlgF [Sphingobium japonicum UT26S]
 gi|292676417|dbj|BAI97935.1| flagellar basal-body rod protein FlgF [Sphingobium japonicum UT26S]
          Length = 246

 Score = 44.9 bits (104), Expect = 0.004,   Method: Composition-based stats.
 Identities = 18/95 (18%), Positives = 34/95 (35%), Gaps = 1/95 (1%)

Query: 40  GSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVAN-ASGIVKYPNVNVL 98
           G DP   + +   ++++  G    K              P  P+A    G ++  NVN  
Sbjct: 150 GGDPANPQQVDKLKLVNPVGSSIAKGTDGLFREANGGVLPDDPIATVTGGSLEGSNVNAT 209

Query: 99  VETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
                M E +R +   ++ I  +  +      L+R
Sbjct: 210 SALVQMIEASRAWETQIKMIDTAKQLDDGGASLMR 244


>gi|289666048|ref|ZP_06487629.1| flagellar basal body rod protein FlgF [Xanthomonas campestris pv.
           vasculorum NCPPB702]
          Length = 251

 Score = 44.9 bits (104), Expect = 0.004,   Method: Composition-based stats.
 Identities = 19/112 (16%), Positives = 38/112 (33%)

Query: 22  MQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGH 81
           M+I S+   +    G+ P +     K    +             +    +   + F    
Sbjct: 137 MEIGSDGSISIIPQGEGPQTMAIVGKMKVVDAPADRLTRRPDGLMRNTSTDPAQAFAVAT 196

Query: 82  PVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
                SG+++  NV+      +M +  R +   ++ IK   D   +   LLR
Sbjct: 197 GKTINSGMLEGSNVDAAGALVEMIQLQRQFEMQVKIIKNGDDNAQSANSLLR 248


>gi|319405396|emb|CBI79015.1| Flagellar basal-body rod protein flgF [Bartonella sp. AR 15-3]
          Length = 244

 Score = 44.9 bits (104), Expect = 0.004,   Method: Composition-based stats.
 Identities = 13/71 (18%), Positives = 31/71 (43%), Gaps = 2/71 (2%)

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
               +  D++ F  E    +      G ++  NVN ++E   + E +R +      ++Q 
Sbjct: 172 PNSSVIPDRAAFQSEEG--NGDGVVQGYIESSNVNGVIEMTRLIEVSRAFERVEAMLRQQ 229

Query: 122 HDMMTTTLDLL 132
            +M + ++ +L
Sbjct: 230 EEMRSKSIQIL 240


>gi|317153838|ref|YP_004121886.1| flagellar hook-associated protein FlgK [Desulfovibrio aespoeensis
           Aspo-2]
 gi|316944089|gb|ADU63140.1| flagellar hook-associated protein FlgK [Desulfovibrio aespoeensis
           Aspo-2]
          Length = 711

 Score = 44.9 bits (104), Expect = 0.004,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 28/72 (38%), Gaps = 2/72 (2%)

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKY--PNVNVLVETADMRETNRLYMANLQTIKQ 120
           V  +G D +     F+  + +A      +     VN+  E +++      Y A  + I  
Sbjct: 639 VGNVGTDTNRAKFNFNFYNTLATDLNERQQQVAGVNLDEEMSNLIRYQASYTAAAKLITT 698

Query: 121 SHDMMTTTLDLL 132
           +  M+ T L L 
Sbjct: 699 ADQMLQTILSLK 710



 Score = 34.5 bits (77), Expect = 5.7,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 25/72 (34%)

Query: 6  ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
          +   +    L     ++Q+  ENIAN  T G +  S                  GV+ K+
Sbjct: 7  SILDMGRWALFASQVQLQVTGENIANVNTEGYSRRSAILEEGPYIDYSPGQLGTGVKAKE 66

Query: 66 IGVDQSTFVEEF 77
          +  +    VE  
Sbjct: 67 VVRNFDEMVESM 78


>gi|197335019|ref|YP_002156699.1| flagellar basal-body rod protein FlgF [Vibrio fischeri MJ11]
 gi|197316509|gb|ACH65956.1| flagellar basal-body rod protein FlgF [Vibrio fischeri MJ11]
          Length = 249

 Score = 44.9 bits (104), Expect = 0.004,   Method: Composition-based stats.
 Identities = 9/44 (20%), Positives = 22/44 (50%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  NVN + E  ++ +  R +   ++ +  + +M   +  LLR
Sbjct: 204 LEGSNVNAVGEMTNLIDLQRQFEMQVKMMSTAEEMDKASDSLLR 247


>gi|169826609|ref|YP_001696767.1| flagellar hook-basal body complex protein [Lysinibacillus
           sphaericus C3-41]
 gi|168991097|gb|ACA38637.1| Flagellar hook-basal body complex protein [Lysinibacillus
           sphaericus C3-41]
          Length = 279

 Score = 44.9 bits (104), Expect = 0.004,   Method: Composition-based stats.
 Identities = 11/52 (21%), Positives = 23/52 (44%)

Query: 80  GHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
              +    G ++  NVN+  E  ++ +T R Y  N +T+  +  M+     +
Sbjct: 227 RQQIGMQGGTLEMSNVNLSKEMTELIQTQRSYQFNARTVTLADQMLGLINGI 278


>gi|154687758|ref|YP_001422919.1| FlhP [Bacillus amyloliquefaciens FZB42]
 gi|154353609|gb|ABS75688.1| FlhP [Bacillus amyloliquefaciens FZB42]
          Length = 273

 Score = 44.9 bits (104), Expect = 0.004,   Method: Composition-based stats.
 Identities = 16/97 (16%), Positives = 31/97 (31%), Gaps = 2/97 (2%)

Query: 32  ARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVA--NASGI 89
           A     T                   + G  +  +    ++ +EE    +  A     G 
Sbjct: 171 ASDQAGTRSQTFNLGIVNVNNPQALHAEGDNLFSVNGAGASAIEELTGANRQAIGMEQGA 230

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           ++  NV++  E   +  + R Y  N +TI     M+ 
Sbjct: 231 LEGSNVDMSKEMTGLIVSQRSYQLNSRTITLGDQMLG 267


>gi|220934395|ref|YP_002513294.1| flagellar basal-body rod protein FlgF [Thioalkalivibrio sp.
           HL-EbGR7]
 gi|219995705|gb|ACL72307.1| flagellar basal-body rod protein FlgF [Thioalkalivibrio sp.
           HL-EbGR7]
          Length = 246

 Score = 44.9 bits (104), Expect = 0.004,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 26/58 (44%)

Query: 76  EFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           E  P   V    G+++  NVN +    +M +  R +   ++ +K + D    +  LLR
Sbjct: 187 EQPPDAGVTLVRGMLESSNVNTVEAMVNMIDLARHFEMQVKMMKTAEDNDAASASLLR 244


>gi|119469951|ref|ZP_01612756.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
           [Alteromonadales bacterium TW-7]
 gi|119446661|gb|EAW27934.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
           [Alteromonadales bacterium TW-7]
          Length = 247

 Score = 44.9 bits (104), Expect = 0.004,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 22/44 (50%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  NVN + E  DM    R +   ++ +K + D+  +   L+R
Sbjct: 202 LEMSNVNPVHEMVDMISHQRQFELQVKLMKTAEDLDRSQDQLMR 245


>gi|71281915|ref|YP_268223.1| flagellar basal-body rod protein FlgF [Colwellia psychrerythraea
           34H]
 gi|71147655|gb|AAZ28128.1| flagellar basal-body rod protein FlgF [Colwellia psychrerythraea
           34H]
          Length = 247

 Score = 44.9 bits (104), Expect = 0.004,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 23/44 (52%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  NVN + E  DM    R +   L+ +K + ++ ++   LLR
Sbjct: 202 LESSNVNPINEMTDMIALQRQFEMQLKMMKTAEEIDSSASSLLR 245


>gi|294084416|ref|YP_003551174.1| flagellar basal-body rod protein FlgG [Candidatus Puniceispirillum
           marinum IMCC1322]
 gi|292663989|gb|ADE39090.1| flagellar basal-body rod protein FlgG [Candidatus Puniceispirillum
           marinum IMCC1322]
          Length = 262

 Score = 44.9 bits (104), Expect = 0.004,   Method: Composition-based stats.
 Identities = 14/71 (19%), Positives = 27/71 (38%)

Query: 55  MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
           +   G     +     +  +             G ++  NVNV+ E  +M ET R Y  +
Sbjct: 185 LQPIGESFSIETAASGAAIIANPQEQGFGKLVQGSLEASNVNVVQELVNMIETQRAYEVS 244

Query: 115 LQTIKQSHDMM 125
            ++I    +M+
Sbjct: 245 SKSITSVDEML 255



 Score = 43.3 bits (100), Expect = 0.012,   Method: Composition-based stats.
 Identities = 16/40 (40%), Positives = 23/40 (57%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
           +S H+A +GL  Q  RMQ+I+ N+AN  TTG       +
Sbjct: 3  TSSMHVAKTGLNAQQTRMQVIANNLANVNTTGFKRDRANF 42


>gi|83312926|ref|YP_423190.1| flagellar hook-associated protein [Magnetospirillum magneticum
           AMB-1]
 gi|82947767|dbj|BAE52631.1| Flagellar hook-associated protein [Magnetospirillum magneticum
           AMB-1]
          Length = 858

 Score = 44.9 bits (104), Expect = 0.004,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 37/102 (36%)

Query: 32  ARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVK 91
           A  +  T  +        S+    H +  +         +   +++      A  S    
Sbjct: 757 AAMSSKTDMATAGSLYAGSYTFAEHAAASIAQVSTDAAHAKDRQDYQTTLGQALNSQFAS 816

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
              VN+  E A+M    + Y A+ + I    +M+ T +++++
Sbjct: 817 TSGVNLDEEVANMINFQQAYSASAKVISTLQEMLDTLVNIVK 858


>gi|85712254|ref|ZP_01043305.1| flagellar hook protein [Idiomarina baltica OS145]
 gi|85693881|gb|EAQ31828.1| flagellar hook protein [Idiomarina baltica OS145]
          Length = 466

 Score = 44.9 bits (104), Expect = 0.004,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 22/42 (52%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           ++  NV++  E  D+    R + AN ++++ ++ +    L +
Sbjct: 424 LENSNVDLTKELVDLISAQRNFQANSRSLEINNSLQQNILQI 465


>gi|308175373|ref|YP_003922078.1| flagellar hook-basal body protein [Bacillus amyloliquefaciens DSM
           7]
 gi|307608237|emb|CBI44608.1| putative flagellar hook-basal body protein [Bacillus
           amyloliquefaciens DSM 7]
 gi|328555347|gb|AEB25839.1| flagellar basal body rod protein FlgG [Bacillus amyloliquefaciens
           TA208]
          Length = 273

 Score = 44.9 bits (104), Expect = 0.004,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 20/47 (42%)

Query: 80  GHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
              +    G ++  NV++  E  D+  + R Y  N +TI     M+ 
Sbjct: 221 RQEIGMEQGALENSNVDMSKEMTDLIVSQRSYQLNSRTITLGDQMLG 267


>gi|299538001|ref|ZP_07051287.1| flagellar hook-basal body complex protein [Lysinibacillus
           fusiformis ZC1]
 gi|298726583|gb|EFI67172.1| flagellar hook-basal body complex protein [Lysinibacillus
           fusiformis ZC1]
          Length = 279

 Score = 44.9 bits (104), Expect = 0.004,   Method: Composition-based stats.
 Identities = 11/52 (21%), Positives = 23/52 (44%)

Query: 80  GHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
              +   SG ++  NVN+  E  ++ +T R Y  N + +  +  M+     +
Sbjct: 227 RQQIGMQSGTLEMSNVNLSKEMTELIQTQRSYQFNARAVTLADQMLGLINGI 278


>gi|296103610|ref|YP_003613756.1| Flagellar basal-body rod protein FlgF [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
 gi|295058069|gb|ADF62807.1| Flagellar basal-body rod protein FlgF [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
          Length = 245

 Score = 44.9 bits (104), Expect = 0.004,   Method: Composition-based stats.
 Identities = 8/47 (17%), Positives = 19/47 (40%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
               ++  NV+ +     M   +R +  N++ I+ + +       LL
Sbjct: 196 TPEAIEGSNVSPVQAMTQMIANSRGFDMNMKVIRTADENAQKANQLL 242


>gi|222053731|ref|YP_002536093.1| flagellar basal-body rod protein FlgF [Geobacter sp. FRC-32]
 gi|221563020|gb|ACM18992.1| flagellar basal-body rod protein FlgF [Geobacter sp. FRC-32]
          Length = 244

 Score = 44.9 bits (104), Expect = 0.004,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 25/65 (38%), Gaps = 1/65 (1%)

Query: 70  QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT-T 128
            +   E            G ++  NVNV+ E   M ET R + +  + ++   D+     
Sbjct: 179 PANPQETPVNVTTTTVQQGALEGSNVNVVAEMVRMIETTRYFESCQKVVRSYDDITGKAA 238

Query: 129 LDLLR 133
            DL R
Sbjct: 239 NDLGR 243



 Score = 36.4 bits (82), Expect = 1.4,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 23/63 (36%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          + +  + A SG      R+ +IS N+ANA T G       +     S +     +     
Sbjct: 1  MNSGLYAALSGNLAAMRRLDVISNNLANANTAGFKGDRLQFESVLASSKSQSQAAASPND 60

Query: 64 KKI 66
            +
Sbjct: 61 SPV 63


>gi|91791429|ref|YP_561080.1| protein of unknown function DUF1078-like protein [Shewanella
           denitrificans OS217]
 gi|91713431|gb|ABE53357.1| protein of unknown function DUF1078-like protein [Shewanella
           denitrificans OS217]
          Length = 392

 Score = 44.9 bits (104), Expect = 0.004,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 20/39 (51%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
           ++  NV++  E ADM    R Y A+ + +  ++ M+   
Sbjct: 347 IEMSNVDLSQEFADMLVIQRGYQASSRILNVANQMIEQL 385



 Score = 37.9 bits (86), Expect = 0.51,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 19/43 (44%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR 46
          ++ + +   SGL   S  +  +S NIAN  T G       Y+ 
Sbjct: 1  MLQAFYTGLSGLNSYSKNLDNVSNNIANMNTAGYRGMDSFYQA 43


>gi|59712480|ref|YP_205256.1| flagellar basal body rod protein FlgF [Vibrio fischeri ES114]
 gi|24459278|gb|AAL86631.1| FlgF [Vibrio fischeri ES114]
 gi|59480581|gb|AAW86368.1| flagellar proximal rod protein FlgF [Vibrio fischeri ES114]
          Length = 249

 Score = 44.9 bits (104), Expect = 0.004,   Method: Composition-based stats.
 Identities = 9/44 (20%), Positives = 22/44 (50%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  NVN + E  ++ +  R +   ++ +  + +M   +  LLR
Sbjct: 204 LEGSNVNAVGEMTNLIDLQRQFEMQVKMMSTAEEMDKASDSLLR 247


>gi|302343756|ref|YP_003808285.1| flagellar basal-body rod protein FlgF [Desulfarculus baarsii DSM
           2075]
 gi|301640369|gb|ADK85691.1| flagellar basal-body rod protein FlgF [Desulfarculus baarsii DSM
           2075]
          Length = 231

 Score = 44.9 bits (104), Expect = 0.004,   Method: Composition-based stats.
 Identities = 8/52 (15%), Positives = 20/52 (38%)

Query: 79  PGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           P   V    G ++  NV V+ +  +M    R + +  + +    ++    + 
Sbjct: 175 PAADVVVNQGSLEMSNVTVVDQMVNMITAQRAFESYQKAVHSLQEIDQKAVS 226


>gi|291287005|ref|YP_003503821.1| fagellar hook-basal body protein [Denitrovibrio acetiphilus DSM
           12809]
 gi|290884165|gb|ADD67865.1| fagellar hook-basal body protein [Denitrovibrio acetiphilus DSM
           12809]
          Length = 209

 Score = 44.9 bits (104), Expect = 0.004,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 26/53 (49%)

Query: 79  PGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           P +     SG+++  +V+   E  DM  T   + AN  +++   DM+   ++L
Sbjct: 155 PENLYMLRSGMLEVSDVDYAREVVDMIVTKNAFSANTSSVRTYDDMLGLIVNL 207


>gi|187934928|ref|YP_001885009.1| flagellar hook-associated protein FlgK [Clostridium botulinum B
           str. Eklund 17B]
 gi|187723081|gb|ACD24302.1| flagellar hook-associated protein FlgK [Clostridium botulinum B
           str. Eklund 17B]
          Length = 604

 Score = 44.9 bits (104), Expect = 0.004,   Method: Composition-based stats.
 Identities = 7/45 (15%), Positives = 20/45 (44%), Gaps = 1/45 (2%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD-LLR 133
           +    V++  E  ++ +    Y AN + +    +++   ++ L R
Sbjct: 560 LSVSGVSLDEEMTNLIQFQHAYSANAKVVSTVDELLDVVINGLKR 604



 Score = 44.5 bits (103), Expect = 0.004,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 19/53 (35%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE 53
          M  L  +  +A  GL VQ   +   S NIANA T G +               
Sbjct: 1  MAGLFDTFTVAKRGLNVQQGAINTTSHNIANANTVGFSRQRAVATTTRPFGGM 53


>gi|197122908|ref|YP_002134859.1| flagellar basal body rod protein [Anaeromyxobacter sp. K]
 gi|196172757|gb|ACG73730.1| flagellar basal body rod protein [Anaeromyxobacter sp. K]
          Length = 235

 Score = 44.9 bits (104), Expect = 0.004,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 22/52 (42%)

Query: 82  PVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             A  SG ++  N   L  +  +    R Y A+LQ I+    +    +++ R
Sbjct: 182 EGAVRSGELELGNAGALEASIQLVSAQRAYEASLQAIQTYRQLDQRAVEVAR 233



 Score = 33.7 bits (75), Expect = 9.2,   Method: Composition-based stats.
 Identities = 10/87 (11%), Positives = 27/87 (31%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +    +++  G   ++ ++  +++N+ANA+T G       +                   
Sbjct: 1  MADGIYVSMCGAVARAEQLDAVADNLANAQTPGFKAARPAFESFLAPGAAQDKRYAAAVA 60

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIV 90
            I +         +    V  A   +
Sbjct: 61 TGIDLRPGPTQRTGNALDVVPEAGMFL 87


>gi|41351258|emb|CAE47476.1| flagellar hook protein [Helicobacter hepaticus]
          Length = 693

 Score = 44.9 bits (104), Expect = 0.004,   Method: Composition-based stats.
 Identities = 11/74 (14%), Positives = 24/74 (32%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +    +   GG    + G      V   + G     +   ++  NV++      +    
Sbjct: 620 FANNAGLQAEGGNVYSQTGNSGEPMVGAANTGRRGGVSGSKLEMSNVDLSRSLTQLIVVQ 679

Query: 109 RLYMANLQTIKQSH 122
           R + AN + +  S 
Sbjct: 680 RGFQANSKAVTTSD 693


>gi|261211321|ref|ZP_05925609.1| flagellar basal-body rod protein FlgF [Vibrio sp. RC341]
 gi|260839276|gb|EEX65902.1| flagellar basal-body rod protein FlgF [Vibrio sp. RC341]
          Length = 249

 Score = 44.9 bits (104), Expect = 0.004,   Method: Composition-based stats.
 Identities = 12/63 (19%), Positives = 29/63 (46%)

Query: 71  STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           +    +F+    V   +G ++  NVN + E   + +  R +   ++ +  + +M  ++  
Sbjct: 185 TDPNTQFEADASVKILTGALEGSNVNAIGEMTSLIDLQRQFEMQVKMMSTAEEMDKSSDS 244

Query: 131 LLR 133
           LLR
Sbjct: 245 LLR 247


>gi|315127352|ref|YP_004069355.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
           [Pseudoalteromonas sp. SM9913]
 gi|315015866|gb|ADT69204.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
           [Pseudoalteromonas sp. SM9913]
          Length = 247

 Score = 44.5 bits (103), Expect = 0.004,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 21/44 (47%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  NVN + E  DM    R +   ++ +K + ++      L+R
Sbjct: 202 LEKSNVNPVHEMVDMISHQRQFELQVKLMKTAEEIDERQEQLMR 245


>gi|309788146|ref|ZP_07682752.1| flagellar basal-body rod flgG domain protein [Shigella
          dysenteriae 1617]
 gi|308923998|gb|EFP69499.1| flagellar basal-body rod flgG domain protein [Shigella
          dysenteriae 1617]
          Length = 82

 Score = 44.5 bits (103), Expect = 0.004,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 21/41 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I+S  IA +GL  Q   M +I+ N+AN  T G       +
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVF 41


>gi|262404539|ref|ZP_06081094.1| flagellar basal-body rod protein FlgF [Vibrio sp. RC586]
 gi|262349571|gb|EEY98709.1| flagellar basal-body rod protein FlgF [Vibrio sp. RC586]
          Length = 249

 Score = 44.5 bits (103), Expect = 0.004,   Method: Composition-based stats.
 Identities = 12/63 (19%), Positives = 29/63 (46%)

Query: 71  STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           +    +F+    V   +G ++  NVN + E   + +  R +   ++ +  + +M  ++  
Sbjct: 185 TDPNMQFEADANVKVLTGALEGSNVNAIGEMTSLIDLQRQFEMQVKMMSTAEEMDKSSDS 244

Query: 131 LLR 133
           LLR
Sbjct: 245 LLR 247


>gi|330946986|gb|EGH47794.1| flagellar hook protein FlgE [Pseudomonas syringae pv. pisi str.
           1704B]
          Length = 80

 Score = 44.5 bits (103), Expect = 0.004,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 23/42 (54%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           ++  NV++ +E  ++ +    Y AN +TI     +M TT+ +
Sbjct: 38  LEESNVDLTMELVNLIKAQSNYQANAKTISTQSTIMQTTIQM 79


>gi|166712061|ref|ZP_02243268.1| flagellar basal body rod protein FlgF [Xanthomonas oryzae pv.
           oryzicola BLS256]
          Length = 251

 Score = 44.5 bits (103), Expect = 0.004,   Method: Composition-based stats.
 Identities = 19/112 (16%), Positives = 38/112 (33%)

Query: 22  MQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGH 81
           M+I S+   +    G+ P +     K    +             +    +   + F    
Sbjct: 137 MEIGSDGSISIIPQGEGPQTMAIVGKMKVVDAPADRLTRRPDGLMRNTSTDPAQAFAVST 196

Query: 82  PVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
                SG+++  NV+      +M +  R +   ++ IK   D   +   LLR
Sbjct: 197 GKTINSGMLEGSNVDAAGALVEMIQLQRQFEMQVKIIKNGDDNAQSANSLLR 248


>gi|144901061|emb|CAM77925.1| probable: Flagellar hook protein FlgE, gene: FLGE OR GSU0419
           [Magnetospirillum gryphiswaldense MSR-1]
          Length = 605

 Score = 44.5 bits (103), Expect = 0.005,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 19/43 (44%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           ++  NV++  E   M  T + Y  N    K + +M T   DL 
Sbjct: 562 LEASNVDIGQEFTKMIVTQKAYTTNATVFKTADEMTTVARDLK 604



 Score = 34.1 bits (76), Expect = 7.0,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 22/56 (39%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            + + A++ +   S  M  IS+NI+N  TTG       ++      +       G 
Sbjct: 78  GAMNNASTAMMATSWDMGSISQNISNVNTTGYKRKETLFKTVMSESKAGPSTHSGK 133


>gi|78047585|ref|YP_363760.1| flagellar basal body rod protein FlgF [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|78036015|emb|CAJ23706.1| flagella basal body rod protein [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
          Length = 251

 Score = 44.5 bits (103), Expect = 0.005,   Method: Composition-based stats.
 Identities = 19/112 (16%), Positives = 38/112 (33%)

Query: 22  MQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGH 81
           M+I S+   +    G+ P +     K    +             +    +   + F    
Sbjct: 137 MEIGSDGSISIIPQGEGPQTMAIVGKMKVVDAPADRLTRRPDGLMRNTSTDPAQAFAVAT 196

Query: 82  PVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
                SG+++  NV+      +M +  R +   ++ IK   D   +   LLR
Sbjct: 197 SKTVNSGMLEGSNVDAAGALVEMIQLQRQFEMQVKIIKNGDDNAQSANSLLR 248


>gi|326386930|ref|ZP_08208544.1| hypothetical protein Y88_1568 [Novosphingobium nitrogenifigens DSM
           19370]
 gi|326208610|gb|EGD59413.1| hypothetical protein Y88_1568 [Novosphingobium nitrogenifigens DSM
           19370]
          Length = 270

 Score = 44.5 bits (103), Expect = 0.005,   Method: Composition-based stats.
 Identities = 14/104 (13%), Positives = 36/104 (34%)

Query: 29  IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASG 88
           I+ +   G           +    + +   G       G+  +    +   G   +  SG
Sbjct: 166 ISVSYADGSNSVIGKVALASFVAPQGLKQVGSSNYTSTGISGTATYGQPSTGQYGSLMSG 225

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
            ++  NV++  E  ++    + + AN + I  +  +    ++L 
Sbjct: 226 SLEASNVDLSSEMVNLITAQQYFQANAKAIDANTTINDAIINLK 269


>gi|190574262|ref|YP_001972107.1| flagellar basal body rod protein FlgF [Stenotrophomonas maltophilia
           K279a]
 gi|190012184|emb|CAQ45807.1| putative flagellar basal-body rod protein [Stenotrophomonas
           maltophilia K279a]
          Length = 249

 Score = 44.5 bits (103), Expect = 0.005,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 25/64 (39%)

Query: 70  QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
            +   + F P    A  SG ++  NV+       M +  R Y   +Q IK   +   +  
Sbjct: 183 NTDPRQPFAPAQGTAVHSGQLEGSNVDAAGALVQMIQLQRQYEMQVQVIKHGDENARSAN 242

Query: 130 DLLR 133
            +LR
Sbjct: 243 SMLR 246


>gi|302874576|ref|YP_003843209.1| flagellar hook-associated protein FlgK [Clostridium cellulovorans
           743B]
 gi|307690813|ref|ZP_07633259.1| flagellar hook-associated protein FlgK [Clostridium cellulovorans
           743B]
 gi|302577433|gb|ADL51445.1| flagellar hook-associated protein FlgK [Clostridium cellulovorans
           743B]
          Length = 579

 Score = 44.5 bits (103), Expect = 0.005,   Method: Composition-based stats.
 Identities = 19/106 (17%), Positives = 33/106 (31%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M  ++++ + AN G+  Q   +   S NIANA T G +                 + + G
Sbjct: 1   MPSILSTLNTANKGINAQQTAISTTSHNIANANTEGYSRQRVNLVTSRPFSSPSFNSAAG 60

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
                 GVD ++     +               N     +     E
Sbjct: 61  PGQIGTGVDVASIERIRNTFLDYQVRQEKSNLGNQTTRNQYLSNIE 106



 Score = 41.0 bits (94), Expect = 0.060,   Method: Composition-based stats.
 Identities = 6/38 (15%), Positives = 17/38 (44%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             V++  E  ++ +    Y+AN + I     ++   ++
Sbjct: 538 SGVSIDEEMTNLIQFQHAYVANAKVISTVDQLLDVLVN 575


>gi|145298491|ref|YP_001141332.1| flagellar hook protein FlgE [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|142851263|gb|ABO89584.1| flagellar hook protein FlgE [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 446

 Score = 44.5 bits (103), Expect = 0.005,   Method: Composition-based stats.
 Identities = 10/60 (16%), Positives = 26/60 (43%)

Query: 72  TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
                 + G   +  S  V+  NV++  +  ++    R + AN ++++ +  +  T L +
Sbjct: 386 ALPGTPNSGTLGSIKSSAVEQSNVDLTSQLVNLITAQRNFQANSRSLEVNSSLQQTILQI 445



 Score = 36.8 bits (83), Expect = 0.95,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 16/39 (41%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          S + A SG+      + + + NIAN  T G       + 
Sbjct: 2  SFNNALSGVNAAQKDLNVTANNIANVNTMGFKESRAEFA 40


>gi|138896904|ref|YP_001127357.1| flagellar hook-basal body protein [Geobacillus thermodenitrificans
           NG80-2]
 gi|134268417|gb|ABO68612.1| Flagellar hook-basal body protein [Geobacillus thermodenitrificans
           NG80-2]
          Length = 273

 Score = 44.5 bits (103), Expect = 0.005,   Method: Composition-based stats.
 Identities = 18/105 (17%), Positives = 33/105 (31%), Gaps = 4/105 (3%)

Query: 30  ANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGI 89
           AN              R+     +++   G           +T     +    +A   G 
Sbjct: 173 ANGAVVARVNLGVTVIRRP----QLLEALGDNVFTLPTAPGATQELNGNLRSQIAMKQGA 228

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
           ++  NV++  E   +  T R Y  N + I  S  M+    +L   
Sbjct: 229 LEQSNVDLGEELIGLMATTRAYQLNARAISISEQMLGLINNLRSS 273



 Score = 36.0 bits (81), Expect = 1.8,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 22/59 (37%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
          ++ S H A + +     R+  +S NI N+ TTG       +        + +      R
Sbjct: 1  MLRSMHTAANTMNALQQRLDTLSHNIVNSNTTGFKRREASFAELLTQQVDRLPDDEAPR 59


>gi|32490790|ref|NP_871044.1| hypothetical protein WGLp041 [Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis]
 gi|25165996|dbj|BAC24187.1| flgE [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 410

 Score = 44.5 bits (103), Expect = 0.005,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 20/43 (46%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           ++  NV++  E   M      Y +N QTIK    ++   +++ 
Sbjct: 368 LESSNVDISNELVKMMTQQSNYQSNAQTIKTQDQLLQILVNMK 410


>gi|312115280|ref|YP_004012876.1| flagellar hook-basal body protein [Rhodomicrobium vannielii ATCC
          17100]
 gi|311220409|gb|ADP71777.1| flagellar hook-basal body protein [Rhodomicrobium vannielii ATCC
          17100]
          Length = 413

 Score = 44.5 bits (103), Expect = 0.005,   Method: Composition-based stats.
 Identities = 20/66 (30%), Positives = 29/66 (43%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            L    + + SG+A QS  +  +++NIAN  TTG    S  +     S     + SGGV
Sbjct: 1  MSLYGLLNTSASGMAAQSTALSTVADNIANVSTTGYKRASTEFSTLVASSGAGNYQSGGV 60

Query: 62 RVKKIG 67
           V    
Sbjct: 61 DVDTRV 66



 Score = 39.5 bits (90), Expect = 0.16,   Method: Composition-based stats.
 Identities = 12/103 (11%), Positives = 35/103 (33%)

Query: 29  IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASG 88
           ++     G +  +       ++  + M    G          S  +            S 
Sbjct: 309 LSVVYEDGSSVAAYTIPLAMVASPDNMTVISGNAYLPNQDSGSVQIGTAGTNGFGTIGSY 368

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            ++  +V++  E   M ++  +Y +N +  +   D++   ++L
Sbjct: 369 TLENSDVDLATELTRMIQSQNIYQSNAKVFQTGSDLLKVLVNL 411


>gi|257866396|ref|ZP_05646049.1| flagellar hook-basal body complex protein [Enterococcus
           casseliflavus EC30]
 gi|257873088|ref|ZP_05652741.1| flagellar hook-basal body complex protein [Enterococcus
           casseliflavus EC10]
 gi|257800354|gb|EEV29382.1| flagellar hook-basal body complex protein [Enterococcus
           casseliflavus EC30]
 gi|257807252|gb|EEV36074.1| flagellar hook-basal body complex protein [Enterococcus
           casseliflavus EC10]
          Length = 233

 Score = 44.5 bits (103), Expect = 0.005,   Method: Composition-based stats.
 Identities = 10/50 (20%), Positives = 23/50 (46%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           +      G ++  NV V  E   M +T+R + AN + +  ++  +   ++
Sbjct: 179 NAPVIQQGALEQANVAVADEMVAMIQTSREFEANQKALSSTNQTLQKAVN 228


>gi|21231396|ref|NP_637313.1| flagellar basal body rod protein FlgF [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66768551|ref|YP_243313.1| flagellar basal body rod protein FlgF [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|21113062|gb|AAM41237.1| flagellar protein [Xanthomonas campestris pv. campestris str. ATCC
           33913]
 gi|66573883|gb|AAY49293.1| flagellar protein [Xanthomonas campestris pv. campestris str. 8004]
          Length = 251

 Score = 44.5 bits (103), Expect = 0.005,   Method: Composition-based stats.
 Identities = 19/112 (16%), Positives = 38/112 (33%)

Query: 22  MQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGH 81
           M+I S+   +    G+ P +     K    +             +    +   + F    
Sbjct: 137 MEIGSDGSISIIPQGEGPQTMAIVGKMKVVDAPADRLMRRPDGLMRNTSTDPAQAFAVAT 196

Query: 82  PVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
                SG+++  NV+      +M +  R +   ++ IK   D   +   LLR
Sbjct: 197 GKTVNSGMLEGSNVDAAGALVEMIQLQRQFEMQVKIIKNGDDNAQSANSLLR 248


>gi|307293786|ref|ZP_07573630.1| flagellar basal-body rod protein FlgF [Sphingobium chlorophenolicum
           L-1]
 gi|306879937|gb|EFN11154.1| flagellar basal-body rod protein FlgF [Sphingobium chlorophenolicum
           L-1]
          Length = 246

 Score = 44.5 bits (103), Expect = 0.005,   Method: Composition-based stats.
 Identities = 18/95 (18%), Positives = 34/95 (35%), Gaps = 1/95 (1%)

Query: 40  GSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVAN-ASGIVKYPNVNVL 98
           G DP   + +   +++   G    K              P  P+A+   G ++  NVN  
Sbjct: 150 GGDPANPQQVDKLKLVSPVGSSIAKGTDGLFREVNGGALPDDPLASVTGGSLEGSNVNAT 209

Query: 99  VETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
                M E +R +   ++ I  +  +      L+R
Sbjct: 210 SALVQMIEASRAWETQVKMIDTAKQLDDGGASLMR 244


>gi|88799021|ref|ZP_01114602.1| Flagellar hook protein FlgE [Reinekea sp. MED297]
 gi|88778248|gb|EAR09442.1| Flagellar hook protein FlgE [Reinekea sp. MED297]
          Length = 1472

 Score = 44.5 bits (103), Expect = 0.005,   Method: Composition-based stats.
 Identities = 13/83 (15%), Positives = 33/83 (39%)

Query: 49   ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
             +  E ++  G    ++        + E   G      S  ++   V++  +   +    
Sbjct: 1389 FANMEGLNPVGQTEWQESFESGDATIGEPGTGLLGTLQSAALEDSTVDLSEQLVHLIIAQ 1448

Query: 109  RLYMANLQTIKQSHDMMTTTLDL 131
            R Y A+ +TI+ ++ +  T ++L
Sbjct: 1449 RNYQASAKTIETANAVTQTIINL 1471


>gi|330445349|ref|ZP_08309001.1| flagellar basal-body rod protein FlgF [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
 gi|328489540|dbj|GAA03498.1| flagellar basal-body rod protein FlgF [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
          Length = 249

 Score = 44.5 bits (103), Expect = 0.005,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 28/60 (46%)

Query: 74  VEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
               D    V  A G+++  NVN + E   M +  R +   ++ +K + +M  ++  L+R
Sbjct: 188 RIPMDADANVTLAKGMLEGSNVNAVSEMTSMIDLQRHFEMQVKLMKTAEEMDKSSSSLMR 247


>gi|317153845|ref|YP_004121893.1| flagellar hook-basal body protein [Desulfovibrio aespoeensis
           Aspo-2]
 gi|316944096|gb|ADU63147.1| flagellar hook-basal body protein [Desulfovibrio aespoeensis
           Aspo-2]
          Length = 257

 Score = 44.5 bits (103), Expect = 0.005,   Method: Composition-based stats.
 Identities = 11/72 (15%), Positives = 25/72 (34%)

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
           GG+        ++           +    G ++  NV V+ E   M ET R +    + +
Sbjct: 180 GGMERVGSNFYRAPGDAAEAEPEDLTVQQGFLEKGNVEVVTEMVQMIETQRAFDMYAKVL 239

Query: 119 KQSHDMMTTTLD 130
           + +  +    + 
Sbjct: 240 QGTDSLDRNMIT 251


>gi|325567513|ref|ZP_08144180.1| flagellar basal-body rod protein [Enterococcus casseliflavus ATCC
           12755]
 gi|325158946|gb|EGC71092.1| flagellar basal-body rod protein [Enterococcus casseliflavus ATCC
           12755]
          Length = 233

 Score = 44.5 bits (103), Expect = 0.005,   Method: Composition-based stats.
 Identities = 10/50 (20%), Positives = 23/50 (46%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           +      G ++  NV V  E   M +T+R + AN + +  ++  +   ++
Sbjct: 179 NAPVIQQGALEQANVAVADEMVAMIQTSREFEANQKALSSTNQTLQKAVN 228


>gi|328913715|gb|AEB65311.1| putative flagellar hook-basal body protein [Bacillus
           amyloliquefaciens LL3]
          Length = 274

 Score = 44.5 bits (103), Expect = 0.005,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 20/47 (42%)

Query: 80  GHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
              +    G ++  NV++  E  D+  + R Y  N +TI     M+ 
Sbjct: 222 RQEIGMEQGALENSNVDMSKEMTDLIVSQRSYQLNSRTITLGDQMLG 268


>gi|225849064|ref|YP_002729228.1| flagellar hook-associated protein FlgK [Sulfurihydrogenibium
           azorense Az-Fu1]
 gi|225644050|gb|ACN99100.1| flagellar hook-associated protein FlgK [Sulfurihydrogenibium
           azorense Az-Fu1]
          Length = 483

 Score = 44.5 bits (103), Expect = 0.005,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 22/41 (53%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             VN+  E  ++ +  R Y A+ + I  + ++M T L+L +
Sbjct: 443 AGVNMDEELINLSKLQRSYQASARIITVTDELMQTILNLGK 483


>gi|209695761|ref|YP_002263691.1| flagellar basal body rod protein FlgF [Aliivibrio salmonicida
           LFI1238]
 gi|208009714|emb|CAQ80018.1| flagellar basal-body rod protein FlgF [Aliivibrio salmonicida
           LFI1238]
          Length = 241

 Score = 44.5 bits (103), Expect = 0.005,   Method: Composition-based stats.
 Identities = 12/61 (19%), Positives = 25/61 (40%)

Query: 73  FVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
               F     V    G ++  NVN + E  ++ +  R +   ++ +  + +M   +  LL
Sbjct: 179 PNNAFQADASVTVLKGALEGSNVNAVGEMTNLIDLQRQFEMQVKMMSTAEEMDKASSSLL 238

Query: 133 R 133
           R
Sbjct: 239 R 239


>gi|150019110|ref|YP_001311364.1| flagellar hook-associated protein FlgK [Clostridium beijerinckii
          NCIMB 8052]
 gi|149905575|gb|ABR36408.1| flagellar hook-associated protein FlgK [Clostridium beijerinckii
          NCIMB 8052]
          Length = 583

 Score = 44.5 bits (103), Expect = 0.005,   Method: Composition-based stats.
 Identities = 16/50 (32%), Positives = 21/50 (42%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS 50
          M  L  +  IA  GL VQ   +   S NI+NA TTG +      +     
Sbjct: 1  MSGLFDTFTIAKRGLNVQQGNINTTSHNISNASTTGYSRQRAVVQTTRPF 50



 Score = 44.1 bits (102), Expect = 0.006,   Method: Composition-based stats.
 Identities = 8/44 (18%), Positives = 21/44 (47%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +    V++  ET ++ +    Y AN + I    +++   ++ L+
Sbjct: 539 LSESGVSIDEETTNLIQFQHAYQANAKVISTVDELLDVVINGLK 582


>gi|315301942|ref|ZP_07872943.1| flagellar hook protein FlgE [Listeria ivanovii FSL F6-596]
 gi|313629684|gb|EFR97816.1| flagellar hook protein FlgE [Listeria ivanovii FSL F6-596]
          Length = 342

 Score = 44.5 bits (103), Expect = 0.005,   Method: Composition-based stats.
 Identities = 15/105 (14%), Positives = 35/105 (33%)

Query: 29  IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASG 88
           IA + + G           T S E+ +   G                          +  
Sbjct: 238 IAVSYSDGTVIPVAQLAVATFSNEDGLVKMGNGEYVPGLSSGDAVYGVAGQNGAGGISGS 297

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NV++  E  ++      +  N + I+ + D+M   ++L++
Sbjct: 298 SLEGSNVDLSREFVNLMTYQSGFQGNTKVIRVADDVMKQIVNLIQ 342


>gi|225569955|ref|ZP_03778980.1| hypothetical protein CLOHYLEM_06050 [Clostridium hylemonae DSM
           15053]
 gi|225161425|gb|EEG74044.1| hypothetical protein CLOHYLEM_06050 [Clostridium hylemonae DSM
           15053]
          Length = 236

 Score = 44.5 bits (103), Expect = 0.005,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 24/45 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G ++  NV++  E A+  E++R Y   L+ ++ S ++  T   L
Sbjct: 190 EGYLELSNVDMAQEMANTVESSRAYSYVLKMVQSSDEIEQTINSL 234



 Score = 35.2 bits (79), Expect = 3.1,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 22/65 (33%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +  S + A+ G   Q  ++ +IS N AN  T G    S  ++           G      
Sbjct: 1  MNTSFYTASRGARTQQDKLNVISNNFANVNTYGYKAKSSVFQDLMYYNMRAGEGVATHLT 60

Query: 64 KKIGV 68
             G 
Sbjct: 61 SGTGT 65


>gi|294625275|ref|ZP_06703914.1| flagellar protein [Xanthomonas fuscans subsp. aurantifolii str.
           ICPB 11122]
 gi|292600449|gb|EFF44547.1| flagellar protein [Xanthomonas fuscans subsp. aurantifolii str.
           ICPB 11122]
          Length = 251

 Score = 44.5 bits (103), Expect = 0.005,   Method: Composition-based stats.
 Identities = 19/112 (16%), Positives = 38/112 (33%)

Query: 22  MQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGH 81
           M+I S+   +    G+ P +     K    +             +    +   + F    
Sbjct: 137 MEIGSDGSISIIPQGEGPQTMAIVGKMKVVDAPADRLTRRPDGLMRNTSTDPAQAFAVAT 196

Query: 82  PVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
                SG+++  NV+      +M +  R +   ++ IK   D   +   LLR
Sbjct: 197 GKTINSGMLEGSNVDAAGALVEMIQLQRQFEMQVKIIKNGDDNAQSANSLLR 248


>gi|223038370|ref|ZP_03608664.1| flagellar basal-body rod protein FlgG (Distal rod protein)
           [Campylobacter rectus RM3267]
 gi|222880227|gb|EEF15314.1| flagellar basal-body rod protein FlgG (Distal rod protein)
           [Campylobacter rectus RM3267]
          Length = 41

 Score = 44.5 bits (103), Expect = 0.005,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 19/41 (46%)

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
             NV++      +    R + AN +TI  S +M+ T L L 
Sbjct: 1   MSNVDLSRSLTQLIVVQRGFQANSKTITTSDEMLNTLLQLK 41


>gi|288870659|ref|ZP_06114878.2| flagellar basal-body rod protein FlgG [Clostridium hathewayi DSM
           13479]
 gi|288866377|gb|EFC98675.1| flagellar basal-body rod protein FlgG [Clostridium hathewayi DSM
           13479]
          Length = 248

 Score = 44.5 bits (103), Expect = 0.005,   Method: Composition-based stats.
 Identities = 7/60 (11%), Positives = 21/60 (35%)

Query: 72  TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
              +  +        +G ++  +  V  E  ++ +  R +  N + +  +  M     +L
Sbjct: 188 PIEDMDETQAGSRLLTGTLELSSTYVPTEMINLLQAQRAFQLNSRIVSAADQMEEMINNL 247


>gi|251772412|gb|EES52979.1| flagellar basal-body rod protein FlgG [Leptospirillum
           ferrodiazotrophum]
          Length = 261

 Score = 44.5 bits (103), Expect = 0.005,   Method: Composition-based stats.
 Identities = 15/84 (17%), Positives = 26/84 (30%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                  +   G     +        +            SG ++  NVNV  E  +M   
Sbjct: 178 QFINPAGLSSRGNNLFMETSASGKPTLSNPGVNGAGRLQSGFLEASNVNVAEELVNMVIG 237

Query: 108 NRLYMANLQTIKQSHDMMTTTLDL 131
            R Y  +  +I+  + M+  T  L
Sbjct: 238 QRAYQMDASSIRTVNRMLGYTATL 261



 Score = 41.8 bits (96), Expect = 0.032,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 25/63 (39%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +  S   A SG+  Q A + +I+ N+AN  TTG       ++            +  +  
Sbjct: 1  MFRSLWNAASGMESQQANLDVITNNLANVNTTGYKRQRANFQDLMYQTMVPPGEASSLEG 60

Query: 64 KKI 66
           ++
Sbjct: 61 NQV 63


>gi|149911702|ref|ZP_01900310.1| flagellar hook protein FlgE [Moritella sp. PE36]
 gi|149805232|gb|EDM65249.1| flagellar hook protein FlgE [Moritella sp. PE36]
          Length = 435

 Score = 44.5 bits (103), Expect = 0.005,   Method: Composition-based stats.
 Identities = 16/87 (18%), Positives = 35/87 (40%)

Query: 45  RRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
                + E+ +  +G    +   +  +    E + G      S  ++  NVN+  E  ++
Sbjct: 348 AMAKFANEQGLSQTGDTGWRASQLSGAAIAGEANSGTFGKINSSALEQSNVNLTSELVNL 407

Query: 105 RETNRLYMANLQTIKQSHDMMTTTLDL 131
               R Y AN +T++ +  +  T L +
Sbjct: 408 ITAQRNYQANSRTLEVNSKLQDTVLQI 434



 Score = 39.1 bits (89), Expect = 0.19,   Method: Composition-based stats.
 Identities = 12/38 (31%), Positives = 17/38 (44%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          S +IA SG+      +   + NIAN  TTG       +
Sbjct: 2  SFNIALSGINAAQKDLNTTANNIANVNTTGFKESRAEF 39


>gi|257876009|ref|ZP_05655662.1| flagellar hook-basal body complex protein [Enterococcus
           casseliflavus EC20]
 gi|257810175|gb|EEV38995.1| flagellar hook-basal body complex protein [Enterococcus
           casseliflavus EC20]
          Length = 233

 Score = 44.5 bits (103), Expect = 0.005,   Method: Composition-based stats.
 Identities = 14/99 (14%), Positives = 32/99 (32%), Gaps = 8/99 (8%)

Query: 32  ARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVK 91
           A     +       +      E +  +G   V       +         +      G ++
Sbjct: 138 ANGQAVSALGSANFQIQTFPPEALTTAGQNYVTSNVAGTT--------VNAPVIQQGALE 189

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             NV V  E   M +T+R + AN + +  ++  +   ++
Sbjct: 190 QANVAVADEMVAMIQTSREFEANQKALSSTNQTLQKAVN 228


>gi|163783192|ref|ZP_02178186.1| flagellar hook associated protein FlgK [Hydrogenivirga sp.
           128-5-R1-1]
 gi|159881526|gb|EDP75036.1| flagellar hook associated protein FlgK [Hydrogenivirga sp.
           128-5-R1-1]
          Length = 528

 Score = 44.5 bits (103), Expect = 0.005,   Method: Composition-based stats.
 Identities = 8/41 (19%), Positives = 22/41 (53%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  +V++  E  ++ +  R Y A  + +    +++ TTL++
Sbjct: 488 EMQSVSIDREFMEIMKVKRTYEAVAKVVTTIDELLQTTLNM 528


>gi|237817504|ref|ZP_04596494.1| flagellar hook protein FlgE [Brucella abortus str. 2308 A]
 gi|237787259|gb|EEP61477.1| flagellar hook protein FlgE [Brucella abortus str. 2308 A]
          Length = 106

 Score = 44.5 bits (103), Expect = 0.006,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 23/59 (38%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
            L        SG+  Q+ R+  +++NIANA T G       +    +      + SG 
Sbjct: 1  MSLYGMMRTGVSGMNAQANRLSTVADNIANASTVGYKRAETQFSSLVLPSTAGQYNSGS 59


>gi|15616299|ref|NP_244604.1| flagellar hook-basal body protein [Bacillus halodurans C-125]
 gi|10176361|dbj|BAB07456.1| flagellar hook-basal body protein [Bacillus halodurans C-125]
          Length = 280

 Score = 44.5 bits (103), Expect = 0.006,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 23/47 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NV++  E  D+ ET R Y  N +++  +  MM     L R
Sbjct: 234 QGTLEGSNVDIGREMTDLIETQRNYQFNARSVSMADQMMGLVNGLRR 280


>gi|242309658|ref|ZP_04808813.1| flagellar hook protein [Helicobacter pullorum MIT 98-5489]
 gi|239523659|gb|EEQ63525.1| flagellar hook protein [Helicobacter pullorum MIT 98-5489]
          Length = 750

 Score = 44.5 bits (103), Expect = 0.006,   Method: Composition-based stats.
 Identities = 13/86 (15%), Positives = 30/86 (34%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
           T +  E +  SG     +        +     G      +  ++  N ++      +   
Sbjct: 665 TFANYEGLQESGSNLYSESPNSGQATIGTAGTGGRANIQASKLEMSNTDLSRGLTQLIVV 724

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            R + A+ ++I  S  ++ T L L +
Sbjct: 725 QRGFQASSKSITTSDQILNTLLGLKQ 750



 Score = 37.9 bits (86), Expect = 0.44,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 16/41 (39%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          ++ S     SG+      + + S NIAN  T G       +
Sbjct: 1  MLRSLWSGVSGMQAHQVALDVESNNIANVNTNGFKYSRADF 41


>gi|167561212|ref|ZP_02354128.1| flagellar hook-associated protein FlgK [Burkholderia oklahomensis
           EO147]
          Length = 668

 Score = 44.5 bits (103), Expect = 0.006,   Method: Composition-based stats.
 Identities = 21/129 (16%), Positives = 40/129 (31%), Gaps = 2/129 (1%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           +    ++ SG      +  I +    N              +   +    + G+    V 
Sbjct: 538 MNGVSVSLSGTPADGDQFTIGANKGTNDGRNALALSQLVNSKTMNNGTTTLTGAYAGYVN 597

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYP--NVNVLVETADMRETNRLYMANLQTIKQSH 122
            IG   S           +       +     VN   E A++ +  +LY AN + I+ + 
Sbjct: 598 AIGNAASQLKASSTAQTALVGQITAQQQSVSGVNQNEEAANLMQYQQLYQANAKVIQTAD 657

Query: 123 DMMTTTLDL 131
            +  T L L
Sbjct: 658 SLFKTVLGL 666


>gi|149189842|ref|ZP_01868122.1| putative flagellar hook-associated protein [Vibrio shilonii AK1]
 gi|148836328|gb|EDL53285.1| putative flagellar hook-associated protein [Vibrio shilonii AK1]
          Length = 457

 Score = 44.1 bits (102), Expect = 0.006,   Method: Composition-based stats.
 Identities = 15/98 (15%), Positives = 31/98 (31%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           +   +IA SG+      + + ++N+AN  T G +              +  +   GV V 
Sbjct: 1   MNLVNIALSGMNANRVALDVTAQNVANINTPGYSRQQAVMASLAGGKYDKTNPGMGVEVT 60

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETA 102
            I      ++ +       A          ++ L    
Sbjct: 61  SIRRVTDQYLVKQTWSTASAANYASGYTSAMSQLENML 98


>gi|188995967|ref|YP_001930218.1| flagellar hook-associated protein FlgK [Sulfurihydrogenibium sp.
           YO3AOP1]
 gi|188931034|gb|ACD65664.1| flagellar hook-associated protein FlgK [Sulfurihydrogenibium sp.
           YO3AOP1]
          Length = 475

 Score = 44.1 bits (102), Expect = 0.006,   Method: Composition-based stats.
 Identities = 15/99 (15%), Positives = 33/99 (33%)

Query: 35  TGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPN 94
                  + Y     S     + S  V +      +     + +     A    +     
Sbjct: 377 KSSLNDPNNYDIIKNSKFSEYYNSQLVAIISSESSRIKTQMKNNQFLYDAITEKMKSLTG 436

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           VN+  E  ++ +  R Y A  + I  + ++M T L++ +
Sbjct: 437 VNMDEELINLTKLQRSYQAAARIITVTDELMQTILNIGK 475


>gi|149173758|ref|ZP_01852387.1| Flagellar biosynthesisprotein [Planctomyces maris DSM 8797]
 gi|148847288|gb|EDL61622.1| Flagellar biosynthesisprotein [Planctomyces maris DSM 8797]
          Length = 274

 Score = 44.1 bits (102), Expect = 0.006,   Method: Composition-based stats.
 Identities = 18/99 (18%), Positives = 37/99 (37%), Gaps = 1/99 (1%)

Query: 33  RTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVAN-ASGIVK 91
                   +D      +    V+       + KIG +  T     +P    AN A G ++
Sbjct: 171 DGVVTPLDADDQPMGKLGQLAVVMPGALDELVKIGKNLYTTEGRVNPLEGPANIAQGFLE 230

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
               N + E  ++  ++R++ +N+  IK   + +   L 
Sbjct: 231 ASGTNSVEEMMELVTSSRMFESNINMIKLQDESLGRLLQ 269



 Score = 38.3 bits (87), Expect = 0.39,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 33/79 (41%), Gaps = 10/79 (12%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE----------E 53
          +I   +++  G    S R+ ++S N+ANA TT        +R      +          +
Sbjct: 18 MIYGMYLSAQGAEANSVRLDVLSNNMANANTTSFKRDVPIFRVNPPHDQHEGALNPLPGD 77

Query: 54 VMHGSGGVRVKKIGVDQST 72
          + + SGG+ ++ I  D   
Sbjct: 78 LENHSGGISLESITTDFEP 96


>gi|325918878|ref|ZP_08180955.1| flagellar basal-body rod protein FlgF, proteobacterial [Xanthomonas
           vesicatoria ATCC 35937]
 gi|325534915|gb|EGD06834.1| flagellar basal-body rod protein FlgF, proteobacterial [Xanthomonas
           vesicatoria ATCC 35937]
          Length = 251

 Score = 44.1 bits (102), Expect = 0.006,   Method: Composition-based stats.
 Identities = 18/112 (16%), Positives = 37/112 (33%)

Query: 22  MQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGH 81
           M+I S+   +    G+ P +     K    +             +    +   + F    
Sbjct: 137 MEIGSDGSISIIPQGEGPQAMDIVGKMKVVDAPADRLTRRPDGLMRNTSTDPAQAFAVAT 196

Query: 82  PVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
                 G+++  NV+      +M +  R +   ++ IK   D   +   LLR
Sbjct: 197 GKTVNGGMLEGSNVDAAGALVEMIQLQRQFEMQVKIIKNGDDNAQSANSLLR 248


>gi|319403955|emb|CBI77543.1| Flagellar basal-body rod protein flgF [Bartonella rochalimae ATCC
           BAA-1498]
 gi|319406971|emb|CBI80608.1| Flagellar basal-body rod protein flgF [Bartonella sp. 1-1C]
          Length = 244

 Score = 44.1 bits (102), Expect = 0.006,   Method: Composition-based stats.
 Identities = 13/71 (18%), Positives = 30/71 (42%), Gaps = 2/71 (2%)

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
               +  D++ F  E           G ++  NVN ++E   + E +R +      ++Q 
Sbjct: 172 PNSSVIPDKAAFQSEGG--SGDTVVQGYIESSNVNGVIEMTRLIEVSRAFERVESMLRQQ 229

Query: 122 HDMMTTTLDLL 132
            +M + ++ +L
Sbjct: 230 EEMRSKSIQIL 240


>gi|255022066|ref|ZP_05294072.1| Flagellar hook protein flgE [Acidithiobacillus caldus ATCC 51756]
 gi|254968552|gb|EET26108.1| Flagellar hook protein flgE [Acidithiobacillus caldus ATCC 51756]
          Length = 416

 Score = 44.1 bits (102), Expect = 0.006,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 22/60 (36%)

Query: 72  TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             V            SG V+  NV++  +  DM    + Y AN  TIK       + L L
Sbjct: 357 PLVNSPGTAGLGVIQSGAVESSNVSLSSQLVDMIVAQQAYQANTSTIKTEQQDTQSLLQL 416



 Score = 34.1 bits (76), Expect = 5.9,   Method: Composition-based stats.
 Identities = 11/34 (32%), Positives = 14/34 (41%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSD 42
          + A SGL      +  I  NIAN  T G    + 
Sbjct: 4  NTAISGLDAAQTDLNTIGNNIANVNTVGFKESNA 37


>gi|255654319|ref|ZP_05399728.1| putative flagellar hook-associated protein [Clostridium difficile
           QCD-23m63]
          Length = 125

 Score = 44.1 bits (102), Expect = 0.006,   Method: Composition-based stats.
 Identities = 22/107 (20%), Positives = 38/107 (35%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M  L +  + ANSG+      +Q IS NI+N  T G +     +   +  +   +  S G
Sbjct: 1   MAGLFSILNTANSGMNSHQKAIQTISHNISNLDTEGYSRQRTEFATNSPMYMPSLSNSIG 60

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                 GV  +      +  +     +   KY       +  +  ET
Sbjct: 61  RGQLGTGVHVTDVTRARNSFYDYQFRAEAHKYGKTVSKYDYYNTIET 107


>gi|119477952|ref|ZP_01618052.1| Flagellar basal body rod protein [marine gamma proteobacterium
           HTCC2143]
 gi|119448865|gb|EAW30107.1| Flagellar basal body rod protein [marine gamma proteobacterium
           HTCC2143]
          Length = 275

 Score = 44.1 bits (102), Expect = 0.006,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 25/59 (42%)

Query: 76  EFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
           + +P   +   SG V+  NVN + E   +    R +  N++ +K   +       +LR 
Sbjct: 216 QQEPDASIRLQSGFVESSNVNPVDELTAIMALARQFEINVKMMKVMEENSDAARQVLRS 274


>gi|261856359|ref|YP_003263642.1| flagellar basal-body rod protein FlgF [Halothiobacillus
           neapolitanus c2]
 gi|261836828|gb|ACX96595.1| flagellar basal-body rod protein FlgF [Halothiobacillus
           neapolitanus c2]
          Length = 247

 Score = 44.1 bits (102), Expect = 0.006,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 25/62 (40%)

Query: 72  TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
                  P   V  ASG+++  NVN +     M E  RL+    + IK +    +    L
Sbjct: 184 PNTPVPQPDAAVQVASGVLEGSNVNPVDSMVKMIEYGRLFEMQTKMIKTADANSSAADQL 243

Query: 132 LR 133
           L+
Sbjct: 244 LK 245


>gi|206603525|gb|EDZ40005.1| Flagellar basal body rod protein [Leptospirillum sp. Group II
           '5-way CG']
          Length = 261

 Score = 44.1 bits (102), Expect = 0.006,   Method: Composition-based stats.
 Identities = 15/84 (17%), Positives = 25/84 (29%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                  +   G     +        +            SG ++  NVNV  E  +M   
Sbjct: 178 QFVNPAGLESRGDNLFMETAASGQPQLSNPGTNGAGRLQSGFLEASNVNVAEELVNMVIG 237

Query: 108 NRLYMANLQTIKQSHDMMTTTLDL 131
            R Y  +   I+  + M+  T  L
Sbjct: 238 QRAYQMDATGIRTVNRMLGYTATL 261



 Score = 43.7 bits (101), Expect = 0.008,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 20/42 (47%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          +  S   A SG+  Q   + +I+ N+AN  TTG       ++
Sbjct: 1  MFRSLWNAASGMEAQQTSLDVITNNLANVNTTGFKRQRANFQ 42


>gi|170751911|ref|YP_001758171.1| hypothetical protein Mrad2831_5543 [Methylobacterium radiotolerans
           JCM 2831]
 gi|170658433|gb|ACB27488.1| protein of unknown function DUF1078 domain protein
           [Methylobacterium radiotolerans JCM 2831]
          Length = 461

 Score = 44.1 bits (102), Expect = 0.006,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 23/43 (53%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  N ++  E + M  T + Y AN + +  +  MM+  L+++R
Sbjct: 419 EQSNTDIASEFSKMIVTQQAYSANTRVMSTAQTMMSDLLNVIR 461



 Score = 35.6 bits (80), Expect = 2.6,   Method: Composition-based stats.
 Identities = 15/37 (40%), Positives = 21/37 (56%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDT 38
            L ++   + SGL  QS  +  IS NIAN++TTG  
Sbjct: 1  MDLFSALQTSVSGLQSQSYAISNISGNIANSQTTGYK 37


>gi|295401181|ref|ZP_06811154.1| flagellar hook-associated protein FlgK [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|294976774|gb|EFG52379.1| flagellar hook-associated protein FlgK [Geobacillus
           thermoglucosidasius C56-YS93]
          Length = 530

 Score = 44.1 bits (102), Expect = 0.006,   Method: Composition-based stats.
 Identities = 22/134 (16%), Positives = 46/134 (34%), Gaps = 4/134 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIIS--ENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
           MD L   A  +NSG +        +S  +++     +   P   P           +   
Sbjct: 390 MDNLSNIAASSNSGESGNGNNALYLSMIKDVQITNGSATLPSGQPVSGSLPITSGTVQTF 449

Query: 59  GGVRVKKIGVD--QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
               + KIG D  Q+  ++        +  +      +V++  E  +M +    Y A  +
Sbjct: 450 YQGLIGKIGADGQQAERMKTNAETLATSVDNKRQSVSSVSLDEEMTNMIKFQHAYNAAAR 509

Query: 117 TIKQSHDMMTTTLD 130
            I    +M+   ++
Sbjct: 510 MITAIDEMLDKIIN 523



 Score = 38.7 bits (88), Expect = 0.26,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 26/78 (33%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M        +A  G+  Q A + + + NIANA T G +     +          M+    
Sbjct: 1  MLSTFHGLEVAKRGMFTQQAALYVTAHNIANANTPGYSRQRVNFVETEPFPPASMNRPQI 60

Query: 61 VRVKKIGVDQSTFVEEFD 78
                GV+  +     D
Sbjct: 61 PGQMGTGVEAGSIQRIRD 78


>gi|258404735|ref|YP_003197477.1| flagellar hook-associated protein FlgK [Desulfohalobium retbaense
           DSM 5692]
 gi|257796962|gb|ACV67899.1| flagellar hook-associated protein FlgK [Desulfohalobium retbaense
           DSM 5692]
          Length = 560

 Score = 44.1 bits (102), Expect = 0.006,   Method: Composition-based stats.
 Identities = 10/70 (14%), Positives = 26/70 (37%)

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
             +   Q+ F             +   +   V++      ++   + + A+ Q +  + +
Sbjct: 491 VGVAGQQNDFNRSSFQNTVDQLEARRQEISGVSINESMIKLQRYQKAFQASAQYLTTADE 550

Query: 124 MMTTTLDLLR 133
           MM T L++ R
Sbjct: 551 MMQTLLNIKR 560



 Score = 40.6 bits (93), Expect = 0.072,   Method: Composition-based stats.
 Identities = 16/99 (16%), Positives = 37/99 (37%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  ++++ H+  +G+A     ++++  N++N  T G +  +             +    G
Sbjct: 1  MAGILSALHLGQTGMAASQKALEVVGNNVSNVSTEGYSRQTIESSALPTLQRGGLSFGQG 60

Query: 61 VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
          V V  I  + + F+ E          +   K   +  L 
Sbjct: 61 VEVSSIERESNMFILERLRAAADQLGNAEAKASPLTDLE 99


>gi|86157778|ref|YP_464563.1| flagellar basal body rod protein [Anaeromyxobacter dehalogenans
           2CP-C]
 gi|85774289|gb|ABC81126.1| flagellar basal body rod protein [Anaeromyxobacter dehalogenans
           2CP-C]
          Length = 235

 Score = 44.1 bits (102), Expect = 0.006,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 22/53 (41%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
              A  SG ++  N   L  +  +    R Y A+LQ I+    +    +++ R
Sbjct: 181 SEGAVRSGELELGNAGALEASIQLVAAQRAYEASLQAIQTYRQLDQRAVEVAR 233


>gi|157363535|ref|YP_001470302.1| flagellar hook-associated protein FlgK [Thermotoga lettingae TMO]
 gi|157314139|gb|ABV33238.1| flagellar hook-associated protein FlgK [Thermotoga lettingae TMO]
          Length = 841

 Score = 44.1 bits (102), Expect = 0.006,   Method: Composition-based stats.
 Identities = 7/37 (18%), Positives = 17/37 (45%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            V++  E  +M +    + A+ + I    +M+   +D
Sbjct: 798 GVSLDEEMTNMIQYQHAFNASARVITTIDEMIGRVID 834


>gi|23092315|gb|AAN08640.1| FlgE [Aeromonas hydrophila]
          Length = 453

 Score = 44.1 bits (102), Expect = 0.006,   Method: Composition-based stats.
 Identities = 14/113 (12%), Positives = 44/113 (38%), Gaps = 1/113 (0%)

Query: 20  ARMQIISENIANAR-TTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFD 78
            +++I ++ I +A  +   T           +  + +   G    ++  +         +
Sbjct: 340 TKVEITADGIVSATYSNATTLKVAMVAMAKFANSQGLTQVGDTSWRQSLLSGDALPGTPN 399

Query: 79  PGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G   +  S  ++  NV++  +  ++    R + AN ++++ +  +  T L +
Sbjct: 400 SGTFGSIKSSSLEQSNVDLTSQLVNLITAQRNFQANSRSLEVNSSLQQTILQI 452



 Score = 36.0 bits (81), Expect = 1.7,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 16/39 (41%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          S + A SG+      + + + NIAN  + G       + 
Sbjct: 2  SFNNALSGVNAAQKDLNVTANNIANVNSIGFKESRAEFA 40


>gi|311992301|gb|ADQ26724.1| flagellar hook protein [Aeromonas hydrophila]
          Length = 443

 Score = 44.1 bits (102), Expect = 0.006,   Method: Composition-based stats.
 Identities = 9/60 (15%), Positives = 26/60 (43%)

Query: 72  TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
                 + G   +  S  ++  NV++  +  ++    R + AN ++++ +  +  T L +
Sbjct: 383 ALPGTPNSGTLGSIKSSALEQSNVDLTSQLVNLITAQRNFQANSRSLEVNSSLQQTILQI 442



 Score = 36.8 bits (83), Expect = 0.94,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 17/39 (43%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          S + A SG+      + + + NIAN  TTG       + 
Sbjct: 1  SFNNALSGVNAAQKDLNVTANNIANVNTTGFKESRAEFA 39


>gi|83589598|ref|YP_429607.1| flagellar hook-associated protein FlgK [Moorella thermoacetica
          ATCC 39073]
 gi|83572512|gb|ABC19064.1| Flagellar hook-associated protein [Moorella thermoacetica ATCC
          39073]
          Length = 486

 Score = 44.1 bits (102), Expect = 0.006,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 20/62 (32%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M       + A  G+  Q   +   S NIANA T G T                M+  GG
Sbjct: 1  MPGTFFGFNTALRGMQAQQRGIYTTSHNIANANTEGYTRQQVVLTATPAYPVPAMNRPGG 60

Query: 61 VR 62
            
Sbjct: 61 QG 62



 Score = 44.1 bits (102), Expect = 0.007,   Method: Composition-based stats.
 Identities = 9/38 (23%), Positives = 18/38 (47%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             V++  E A+M +  R Y A+ + I     M+   ++
Sbjct: 443 SGVSLDEEMANMLQYLRAYEASARMITTLDSMLDKIIN 480


>gi|332524834|ref|ZP_08401025.1| flagellar basal body rod protein [Rubrivivax benzoatilyticus JA2]
 gi|332108134|gb|EGJ09358.1| flagellar basal body rod protein [Rubrivivax benzoatilyticus JA2]
          Length = 164

 Score = 44.1 bits (102), Expect = 0.007,   Method: Composition-based stats.
 Identities = 22/130 (16%), Positives = 39/130 (30%), Gaps = 31/130 (23%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
           D +  +A  + SGL     R+ +   N+AN+ T G                +V   +   
Sbjct: 64  DVVTPAASASLSGLNAAQTRLDVAGHNVANSLTEG-------------FRRQVAQPATAQ 110

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
            V                                ++  +T  M E    + ANL   +  
Sbjct: 111 PVGVTVSIAQMPE------------------AGSDLAADTVGMIEARHAFGANLMVFRAQ 152

Query: 122 HDMMTTTLDL 131
             M ++ LD+
Sbjct: 153 DAMSSSLLDI 162


>gi|260774939|ref|ZP_05883840.1| flagellar basal-body rod protein FlgF [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260609194|gb|EEX35352.1| flagellar basal-body rod protein FlgF [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 249

 Score = 44.1 bits (102), Expect = 0.007,   Method: Composition-based stats.
 Identities = 11/62 (17%), Positives = 27/62 (43%)

Query: 72  TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
                ++    V   +G ++  NVN + E  ++ +  R +   ++ +  + +M   +  L
Sbjct: 186 DPNAAYEMDAGVKLLTGALEGSNVNAIGEMTNLIDLQRQFEMQVKMMSTAEEMDKASDSL 245

Query: 132 LR 133
           LR
Sbjct: 246 LR 247


>gi|254508430|ref|ZP_05120550.1| flagellar basal-body rod protein FlgF [Vibrio parahaemolyticus 16]
 gi|219548640|gb|EED25645.1| flagellar basal-body rod protein FlgF [Vibrio parahaemolyticus 16]
          Length = 249

 Score = 44.1 bits (102), Expect = 0.007,   Method: Composition-based stats.
 Identities = 11/62 (17%), Positives = 27/62 (43%)

Query: 72  TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
                ++    V   +G ++  NVN + E   + +  R +   ++ +  + +M  ++  L
Sbjct: 186 DPNAAYEADAGVKLLTGAIEGSNVNAIGEMTSLIDLQRQFEMQVKMMSTAEEMDKSSDSL 245

Query: 132 LR 133
           LR
Sbjct: 246 LR 247


>gi|124516715|gb|EAY58223.1| Flagellar basal body rod protein FlgG [Leptospirillum rubarum]
          Length = 261

 Score = 44.1 bits (102), Expect = 0.007,   Method: Composition-based stats.
 Identities = 15/84 (17%), Positives = 25/84 (29%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                  +   G     +        +            SG ++  NVNV  E  +M   
Sbjct: 178 QFVNPAGLESRGNNLFMETAASGQPQLSNPGTNGTGRLQSGFLEASNVNVAEELVNMVIG 237

Query: 108 NRLYMANLQTIKQSHDMMTTTLDL 131
            R Y  +   I+  + M+  T  L
Sbjct: 238 QRAYQMDATGIRTVNRMLGYTATL 261



 Score = 43.7 bits (101), Expect = 0.008,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 20/42 (47%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          +  S   A SG+  Q   + +I+ N+AN  TTG       ++
Sbjct: 1  MFRSLWNAASGMEAQQTSLDVITNNLANVNTTGFKRQRANFQ 42


>gi|323174793|gb|EFZ60408.1| flagellar basal-body rod protein flgG domain protein [Escherichia
          coli LT-68]
          Length = 79

 Score = 44.1 bits (102), Expect = 0.007,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 21/41 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I+S  IA +GL  Q   M +I+ N+AN  T G       +
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVF 41


>gi|197122916|ref|YP_002134867.1| flagellar hook-associated protein FlgK [Anaeromyxobacter sp. K]
 gi|196172765|gb|ACG73738.1| flagellar hook-associated protein FlgK [Anaeromyxobacter sp. K]
          Length = 469

 Score = 44.1 bits (102), Expect = 0.007,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 19/40 (47%)

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
              V+V  E  +M +  R Y A  + I+ S +M  T L L
Sbjct: 429 ASGVSVDEELLEMEKAQRAYEAISKVIQASSEMFDTLLKL 468


>gi|28211310|ref|NP_782254.1| flagellar basal body rod protein FlgG [Clostridium tetani E88]
 gi|28203750|gb|AAO36191.1| flagellar hook-basal body complex protein [Clostridium tetani E88]
          Length = 260

 Score = 44.1 bits (102), Expect = 0.007,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 19/45 (42%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
               ++  NVN + E  +M    R +  N + I+   D +   ++
Sbjct: 210 KQNTLEKSNVNTIREMIEMMTVMRTFETNQKIIQSIDDTLGKAVN 254


>gi|188580158|ref|YP_001923603.1| flagellar hook-associated protein FlgK [Methylobacterium populi
           BJ001]
 gi|179343656|gb|ACB79068.1| flagellar hook-associated protein FlgK [Methylobacterium populi
           BJ001]
          Length = 632

 Score = 44.1 bits (102), Expect = 0.007,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 20/43 (46%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
                 VN+  E +++    + Y AN + +  + DM+ T L +
Sbjct: 590 FASASGVNIDQEMSNLIALQQAYAANARVLTAARDMIDTLLRI 632


>gi|117620743|ref|YP_857343.1| flagellar hook protein FlgE [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
 gi|117562150|gb|ABK39098.1| flagellar hook protein FlgE [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
          Length = 444

 Score = 44.1 bits (102), Expect = 0.007,   Method: Composition-based stats.
 Identities = 9/60 (15%), Positives = 26/60 (43%)

Query: 72  TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
                 + G   +  S  ++  NV++  +  ++    R + AN ++++ +  +  T L +
Sbjct: 384 ALPGTPNSGTLGSIKSSALEQSNVDLTSQLVNLITAQRNFQANSRSLEVNSSLQQTILQI 443



 Score = 36.8 bits (83), Expect = 1.0,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 17/39 (43%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          S + A SG+      + + + NIAN  TTG       + 
Sbjct: 2  SFNNALSGVNAAQKDLNVTANNIANVNTTGFKESRAEFA 40


>gi|311033283|ref|ZP_07711373.1| flagellar basal-body rod protein [Bacillus sp. m3-13]
          Length = 273

 Score = 44.1 bits (102), Expect = 0.007,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 24/56 (42%), Gaps = 1/56 (1%)

Query: 79  PGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH-DMMTTTLDLLR 133
           PG   + + G ++  NV+     +DM    R + AN + I+     M     ++ R
Sbjct: 216 PGVNYSISQGHIERSNVDTAQAMSDMTAAYRAFEANQKVIQAYDMSMQKAANEIGR 271



 Score = 37.2 bits (84), Expect = 0.83,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 29/72 (40%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++   + A +G+  Q  RM+++S N++NA T G        R       + M  + G   
Sbjct: 1  MLRGFYTATAGMISQQRRMEMMSNNLSNANTPGYKADQGSLRSFPDMLLQRMEQASGTNT 60

Query: 64 KKIGVDQSTFVE 75
               + +  V 
Sbjct: 61 FSPMSNPNDPVR 72


>gi|296274022|ref|YP_003656653.1| fagellar hook-basal body protein [Arcobacter nitrofigilis DSM 7299]
 gi|296098196|gb|ADG94146.1| fagellar hook-basal body protein [Arcobacter nitrofigilis DSM 7299]
          Length = 487

 Score = 44.1 bits (102), Expect = 0.007,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 18/43 (41%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           V+  N+NV      +    R + A+ + I  S   + T + L 
Sbjct: 443 VEASNINVATALTKLIIAQRAFEASSKAITTSDSFLDTAIKLK 485


>gi|212634349|ref|YP_002310874.1| flagellar basal body rod protein FlgF [Shewanella piezotolerans
           WP3]
 gi|212555833|gb|ACJ28287.1| Flagellar basal body rod protein [Shewanella piezotolerans WP3]
          Length = 247

 Score = 44.1 bits (102), Expect = 0.007,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 21/44 (47%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           V+  NVN + E   M +  R +   ++ +K + +    +  L+R
Sbjct: 202 VEGSNVNAVHEMVSMIDIQRQFEMQVKMMKTAEETDKASASLMR 245


>gi|254519397|ref|ZP_05131453.1| flagellar basal body rod protein FlgG [Clostridium sp. 7_2_43FAA]
 gi|226913146|gb|EEH98347.1| flagellar basal body rod protein FlgG [Clostridium sp. 7_2_43FAA]
          Length = 257

 Score = 44.1 bits (102), Expect = 0.007,   Method: Composition-based stats.
 Identities = 10/62 (16%), Positives = 25/62 (40%)

Query: 70  QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
             +   E           G ++  NV++  E ++M  T R +  + + +K + +M     
Sbjct: 193 TPSPGVEVQRTTDFDIYQGSLEGSNVDIATEFSEMILTQRAFELSSRGVKTADEMWGMIN 252

Query: 130 DL 131
           ++
Sbjct: 253 NM 254



 Score = 39.5 bits (90), Expect = 0.15,   Method: Composition-based stats.
 Identities = 13/94 (13%), Positives = 33/94 (35%), Gaps = 2/94 (2%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ +     +G+     ++  IS NIAN+ T G       ++       +        + 
Sbjct: 1  MLRTLWTGKTGMNANQDKLDAISNNIANSTTMGYKKIDVGFKDLLTESLDRNGIPLNDKD 60

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNV 97
            IG    T   E+   +        ++  ++++
Sbjct: 61 SVIGTGTRT--SEWFRDNSQGMLQETLRSTDLSI 92


>gi|149191154|ref|ZP_01869412.1| putative flagellar basal-body rod protein [Vibrio shilonii AK1]
 gi|148834992|gb|EDL51971.1| putative flagellar basal-body rod protein [Vibrio shilonii AK1]
          Length = 244

 Score = 44.1 bits (102), Expect = 0.007,   Method: Composition-based stats.
 Identities = 11/52 (21%), Positives = 22/52 (42%)

Query: 82  PVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            V   SG ++  NV+ L E   +    R Y   ++ +  + ++      LL+
Sbjct: 192 TVQVRSGYLEASNVSSLEELVSIMSLTRQYEMQIEVMASADEIAQIGNKLLK 243


>gi|300854231|ref|YP_003779215.1| flagellar basal-body rod protein [Clostridium ljungdahlii DSM
           13528]
 gi|300434346|gb|ADK14113.1| flagellar basal-body rod protein [Clostridium ljungdahlii DSM
           13528]
          Length = 262

 Score = 44.1 bits (102), Expect = 0.007,   Method: Composition-based stats.
 Identities = 9/44 (20%), Positives = 18/44 (40%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  NV++  E  DM    R +    + +  S +M      + R
Sbjct: 219 LEQSNVDLGREMTDMIMAQRSFELASKGLTTSDEMWGLINSMKR 262



 Score = 40.2 bits (92), Expect = 0.090,   Method: Composition-based stats.
 Identities = 10/82 (12%), Positives = 23/82 (28%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ +   + S +  Q  ++  IS N+AN+ T G    +  +                   
Sbjct: 1  MLRAIWNSVSAMNAQQDKLNSISNNLANSDTVGYKKENVEFNDLVYETLNRKGYPTNSNG 60

Query: 64 KKIGVDQSTFVEEFDPGHPVAN 85
                      E+   +    
Sbjct: 61 TNTINGTGVKATEWIRDNAQGP 82


>gi|261341493|ref|ZP_05969351.1| flagellar basal-body rod protein FlgF [Enterobacter cancerogenus
           ATCC 35316]
 gi|288316289|gb|EFC55227.1| flagellar basal-body rod protein FlgF [Enterobacter cancerogenus
           ATCC 35316]
          Length = 243

 Score = 43.7 bits (101), Expect = 0.007,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 37/110 (33%), Gaps = 1/110 (0%)

Query: 26  SENIANARTTGDTPGSDPYRRKTISFE-EVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVA 84
           S NIA+       P              +++        K       T          V 
Sbjct: 133 SINIADDGVISIVPDDGNVAAPMDVDRIKLVDIPASQLSKDAAGFMITNANVNPRTEEVE 192

Query: 85  NASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
             SG ++  NV+ + E       NR + A ++ +K + D+ T    LLR+
Sbjct: 193 LVSGHLESSNVSAISEMVASIALNRQFEAQIKMMKAAEDLATAGNRLLRN 242


>gi|323498419|ref|ZP_08103415.1| flagellar basal body rod protein FlgF [Vibrio sinaloensis DSM
           21326]
 gi|323316492|gb|EGA69507.1| flagellar basal body rod protein FlgF [Vibrio sinaloensis DSM
           21326]
          Length = 249

 Score = 43.7 bits (101), Expect = 0.008,   Method: Composition-based stats.
 Identities = 11/62 (17%), Positives = 27/62 (43%)

Query: 72  TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
                ++    V   +G ++  NVN + E   + +  R +   ++ +  + +M  ++  L
Sbjct: 186 DPNAAYEADADVKLLTGAIEGSNVNAIGEMTSLIDLQRQFEMQVKMMSTAEEMDKSSDSL 245

Query: 132 LR 133
           LR
Sbjct: 246 LR 247


>gi|312793870|ref|YP_004026793.1| flagellar hook-associated protein flgk [Caldicellulosiruptor
           kristjanssonii 177R1B]
 gi|312181010|gb|ADQ41180.1| flagellar hook-associated protein FlgK [Caldicellulosiruptor
           kristjanssonii 177R1B]
          Length = 527

 Score = 43.7 bits (101), Expect = 0.008,   Method: Composition-based stats.
 Identities = 6/38 (15%), Positives = 18/38 (47%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             V++  E  ++ +    + A+ + I    +M+ T ++
Sbjct: 483 SGVSIDEEMTNLIKYQHGFQASARMINAFDEMLDTIVN 520



 Score = 36.0 bits (81), Expect = 2.0,   Method: Composition-based stats.
 Identities = 17/103 (16%), Positives = 34/103 (33%), Gaps = 2/103 (1%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
                IA +G+ V    +++ S N+ANA T G T        K+      +         
Sbjct: 3   FYGLEIARTGIFVNRKGLEVTSHNVANASTPGYT--RQVLNVKSNPPSSKVGFYSPKFQV 60

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
            +G D  +  +  D    +   +   +     +  +  +  E 
Sbjct: 61  GMGADVQSLEQIRDMFLDMQYRNEYSRQGEYEIKADNLNFIEA 103


>gi|288554368|ref|YP_003426303.1| flagellar basal-body rod protein [Bacillus pseudofirmus OF4]
 gi|288545528|gb|ADC49411.1| flagellar basal-body rod protein [Bacillus pseudofirmus OF4]
          Length = 272

 Score = 43.7 bits (101), Expect = 0.008,   Method: Composition-based stats.
 Identities = 7/48 (14%), Positives = 18/48 (37%)

Query: 83  VANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
                G ++  NV+      +M    R + AN + ++     +   ++
Sbjct: 219 YQLQQGFIERSNVDASQTMTEMMNAYRSFEANQRILQAYDQSLDKAVN 266



 Score = 37.9 bits (86), Expect = 0.47,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 26/67 (38%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++   + A +G+  Q  R ++++ N+ANA T G        R       + M   G    
Sbjct: 1  MLRGLYGAAAGMIAQQQRQEMLTNNLANANTPGYKADQASLRAFPNMLIKAMDTQGPKGA 60

Query: 64 KKIGVDQ 70
              + +
Sbjct: 61 SAPIIGE 67


>gi|218778847|ref|YP_002430165.1| hypothetical protein Dalk_0994 [Desulfatibacillum alkenivorans
           AK-01]
 gi|218760231|gb|ACL02697.1| Putative Flagellar basal-body rod protein FlgG or FlgF
           [Desulfatibacillum alkenivorans AK-01]
          Length = 228

 Score = 43.7 bits (101), Expect = 0.008,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 19/45 (42%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             G ++  NV V  E   M E+ R Y    + +  + +M T  + 
Sbjct: 178 NQGYLEQSNVIVPQEMVKMMESLRTYETFQKYMNTASEMDTKAVS 222


>gi|315125984|ref|YP_004067987.1| flagellar hook protein FlgE [Pseudoalteromonas sp. SM9913]
 gi|315014498|gb|ADT67836.1| flagellar hook protein FlgE [Pseudoalteromonas sp. SM9913]
          Length = 442

 Score = 43.7 bits (101), Expect = 0.008,   Method: Composition-based stats.
 Identities = 9/35 (25%), Positives = 17/35 (48%)

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
             NV++  +   +    + Y AN +TI  + +MM 
Sbjct: 402 GSNVDISEQLVGLMSFQQNYQANAKTISSADEMMQ 436



 Score = 34.8 bits (78), Expect = 4.1,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 28/65 (43%), Gaps = 5/65 (7%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          ++  +I  SGL    A +++ S NIAN+ T G    +  +              GGV+V 
Sbjct: 1  MSMFNIGLSGLKSTQAGLEVTSNNIANSGTAGYKNNTAEFAA-----VYNGSQRGGVKVA 55

Query: 65 KIGVD 69
           +  D
Sbjct: 56 NVKED 60


>gi|260886210|ref|ZP_05897473.1| flagellar basal-body rod protein FlgG [Selenomonas sputigena ATCC
           35185]
 gi|330839794|ref|YP_004414374.1| flagellar hook-basal body protein [Selenomonas sputigena ATCC
           35185]
 gi|260863929|gb|EEX78429.1| flagellar basal-body rod protein FlgG [Selenomonas sputigena ATCC
           35185]
 gi|329747558|gb|AEC00915.1| flagellar hook-basal body protein [Selenomonas sputigena ATCC
           35185]
          Length = 264

 Score = 43.7 bits (101), Expect = 0.008,   Method: Composition-based stats.
 Identities = 18/100 (18%), Positives = 36/100 (36%), Gaps = 1/100 (1%)

Query: 32  ARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVAN-ASGIV 90
           A  T    G     ++ I   + +       V K G +     +  +P     +   G++
Sbjct: 159 ANITIGAKGEIMDGQRRIDTLQFVQFDDRRAVLKQGDNLYRPQQGAEPQAATGDIQQGML 218

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           +  NVN+  E   +    R+Y A  + +     M   T++
Sbjct: 219 ENSNVNIASEMVSLINNYRIYEAGSRALVTQDSMTDKTVN 258



 Score = 38.3 bits (87), Expect = 0.36,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 22/39 (56%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSD 42
          ++   ++A SG+  ++ R  +I+ N+ANA ++G      
Sbjct: 1  MLRGLYVAASGMITETNRTDVIANNLANAASSGYKRDEA 39


>gi|207093272|ref|ZP_03241059.1| flagellar hook protein FlgE [Helicobacter pylori HPKX_438_AG0C1]
          Length = 40

 Score = 43.7 bits (101), Expect = 0.008,   Method: Composition-based stats.
 Identities = 9/40 (22%), Positives = 20/40 (50%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           NV++     ++    R + AN + +  S  ++ T L+L +
Sbjct: 1   NVDLSRSLTNLIVVQRGFQANSKAVTTSDQILNTLLNLKQ 40


>gi|157959896|ref|YP_001499930.1| flagellar hook-associated protein FlgK [Shewanella pealeana ATCC
           700345]
 gi|157844896|gb|ABV85395.1| flagellar hook-associated protein FlgK [Shewanella pealeana ATCC
           700345]
          Length = 457

 Score = 43.7 bits (101), Expect = 0.008,   Method: Composition-based stats.
 Identities = 12/61 (19%), Positives = 23/61 (37%)

Query: 70  QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
           Q+   +E      +   S       VN+  E  ++    + Y AN + I  +  +  T L
Sbjct: 395 QAKMAKETAEKVQIEAQSQWASTSGVNMDEEGVNLIIYQQSYQANAKVISTADQLFQTIL 454

Query: 130 D 130
           +
Sbjct: 455 N 455


>gi|196249721|ref|ZP_03148417.1| protein of unknown function DUF1078 domain protein [Geobacillus sp.
           G11MC16]
 gi|196210597|gb|EDY05360.1| protein of unknown function DUF1078 domain protein [Geobacillus sp.
           G11MC16]
          Length = 273

 Score = 43.7 bits (101), Expect = 0.008,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 22/55 (40%)

Query: 80  GHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
              +A   G ++  NV++  E   +  T R Y  N + I  S  M+    +L   
Sbjct: 219 RSQIAMKQGALEQSNVDLGEELIGLMATTRAYQLNARAISISEQMLGLINNLRSS 273



 Score = 38.3 bits (87), Expect = 0.33,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 23/59 (38%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
          ++ S H A + +     R+  +S NIAN+ TTG       +        + +      R
Sbjct: 1  MLRSMHTAANTMNALQQRLDTLSHNIANSNTTGFKRREASFAELLTQQVDHLPDDEAPR 59


>gi|163789628|ref|ZP_02184066.1| hypothetical protein CAT7_09300 [Carnobacterium sp. AT7]
 gi|159875160|gb|EDP69226.1| hypothetical protein CAT7_09300 [Carnobacterium sp. AT7]
          Length = 251

 Score = 43.7 bits (101), Expect = 0.008,   Method: Composition-based stats.
 Identities = 8/48 (16%), Positives = 19/48 (39%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
               ++  NV++     +M    R Y  NL+  + + +M +      +
Sbjct: 204 QQHYLEASNVDLASSMTEMILAQRSYSMNLKVAQGTDEMASVINQFKQ 251



 Score = 34.1 bits (76), Expect = 6.8,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 19/38 (50%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGS 41
          +     I+ SG+     +M ++S +IAN  TTG    +
Sbjct: 1  MSIPLSISKSGMNAIQNQMDVVSNDIANINTTGYKSKN 38


>gi|237752647|ref|ZP_04583127.1| biosynthetic arginine decarboxylase [Helicobacter winghamensis ATCC
           BAA-430]
 gi|229376136|gb|EEO26227.1| biosynthetic arginine decarboxylase [Helicobacter winghamensis ATCC
           BAA-430]
          Length = 71

 Score = 43.7 bits (101), Expect = 0.008,   Method: Composition-based stats.
 Identities = 9/51 (17%), Positives = 21/51 (41%)

Query: 82  PVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
                   ++  NV++  +            AN+++I+ +  M+ T LD+ 
Sbjct: 20  STNVQQATLETSNVDLTTQIPQQIVAQNGVEANVKSIQTADSMLQTLLDIK 70


>gi|170750088|ref|YP_001756348.1| hypothetical protein Mrad2831_3689 [Methylobacterium radiotolerans
           JCM 2831]
 gi|170656610|gb|ACB25665.1| protein of unknown function DUF1078 domain protein
           [Methylobacterium radiotolerans JCM 2831]
          Length = 263

 Score = 43.7 bits (101), Expect = 0.008,   Method: Composition-based stats.
 Identities = 10/51 (19%), Positives = 23/51 (45%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +     +G V+  N  +  + + M ET + Y AN + +  +  M+   + +
Sbjct: 211 NGATVTAGSVEQSNAGISDQFSKMIETQQAYTANTKVMSTTDQMLQDAIAM 261



 Score = 36.4 bits (82), Expect = 1.2,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 23/59 (38%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
            L  +   + SG + QS  +  IS NIAN +T G       +        +    +GG
Sbjct: 1  MGLFTALSNSISGASAQSLALNNISGNIANTQTVGFKSTETRFADMLAETGDSTQLAGG 59


>gi|260767768|ref|ZP_05876703.1| flagellar basal-body rod protein FlgF [Vibrio furnissii CIP 102972]
 gi|260617277|gb|EEX42461.1| flagellar basal-body rod protein FlgF [Vibrio furnissii CIP 102972]
 gi|315179400|gb|ADT86314.1| flagellar basal body rod protein FlgF [Vibrio furnissii NCTC 11218]
          Length = 249

 Score = 43.7 bits (101), Expect = 0.008,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 22/44 (50%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           V+  NVN + E   + +  R +   ++ +  + DM  ++  LLR
Sbjct: 204 VEGSNVNAVGEMTSLIDLQRQFEMQVKMMSTAEDMDKSSDSLLR 247


>gi|254520946|ref|ZP_05133001.1| flagellar basal-body rod protein FlgF [Stenotrophomonas sp. SKA14]
 gi|219718537|gb|EED37062.1| flagellar basal-body rod protein FlgF [Stenotrophomonas sp. SKA14]
          Length = 249

 Score = 43.7 bits (101), Expect = 0.008,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 25/64 (39%)

Query: 70  QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
            +   + F P    A  SG ++  NV+       M +  R Y   +Q IK   D   +  
Sbjct: 183 NTDPQQPFAPAQGTAVHSGQLEGSNVDAAGALVQMIQLQRQYEMQVQVIKHGDDNARSAN 242

Query: 130 DLLR 133
            LLR
Sbjct: 243 SLLR 246


>gi|226315011|ref|YP_002774907.1| flagellar basal-body rod protein [Brevibacillus brevis NBRC 100599]
 gi|226097961|dbj|BAH46403.1| flagellar basal-body rod protein [Brevibacillus brevis NBRC 100599]
          Length = 329

 Score = 43.7 bits (101), Expect = 0.008,   Method: Composition-based stats.
 Identities = 10/53 (18%), Positives = 16/53 (30%), Gaps = 1/53 (1%)

Query: 82  PVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD-LLR 133
                 G  +  NV+       M    R Y AN + I      +    + + R
Sbjct: 274 RFGTQQGWRERSNVDPAQTMTSMMSVLRAYEANQRVITTIDGTLEKAANEIGR 326



 Score = 41.0 bits (94), Expect = 0.051,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 24/70 (34%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I   + + SG+     R + ++ N+AN  T G        R         M+   G+ V
Sbjct: 1  MIRGLYTSASGMLALQNRQESLANNLANINTPGFKQDVGVMRAFPEQLLSRMNDKEGLDV 60

Query: 64 KKIGVDQSTF 73
            I       
Sbjct: 61 PGIPTMPGQP 70


>gi|134300250|ref|YP_001113746.1| flagellar basal-body rod protein FlgB [Desulfotomaculum reducens
           MI-1]
 gi|134052950|gb|ABO50921.1| flagellar basal-body rod protein FlgB [Desulfotomaculum reducens
           MI-1]
          Length = 132

 Score = 43.7 bits (101), Expect = 0.009,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 33/114 (28%), Gaps = 5/114 (4%)

Query: 1   MDYL-IASAHIANSGLAVQSARMQIISENIANARTTGDTPG-SDPYRRKTISFEEVMHGS 58
           MD     +  I   GL   +AR ++I+ NIAN  T G          +   +        
Sbjct: 1   MDVFNSPTLMILQQGLDAGAARQRVIANNIANFNTPGFKKSYVSFEDQLKAALGNSGVSL 60

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
            G     IG        E                 NV+V  E  ++      Y 
Sbjct: 61  KGTHPLHIGTSNREIKPEIKQVEETTMR---YDGNNVDVDEEMVNLAAATIEYD 111


>gi|269103189|ref|ZP_06155886.1| flagellar basal-body rod protein FlgF [Photobacterium damselae
           subsp. damselae CIP 102761]
 gi|268163087|gb|EEZ41583.1| flagellar basal-body rod protein FlgF [Photobacterium damselae
           subsp. damselae CIP 102761]
          Length = 249

 Score = 43.7 bits (101), Expect = 0.009,   Method: Composition-based stats.
 Identities = 9/44 (20%), Positives = 23/44 (52%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  NVN + E   + +  R +   ++ +K + +M  ++  L+R
Sbjct: 204 LEGSNVNAVGEMTALIDLQRHFEMQVKLMKTAEEMDKSSSSLMR 247


>gi|256370963|ref|YP_003108787.1| protein of unknown function DUF1078 domain protein [Acidimicrobium
           ferrooxidans DSM 10331]
 gi|256007547|gb|ACU53114.1| protein of unknown function DUF1078 domain protein [Acidimicrobium
           ferrooxidans DSM 10331]
          Length = 431

 Score = 43.7 bits (101), Expect = 0.009,   Method: Composition-based stats.
 Identities = 8/84 (9%), Positives = 29/84 (34%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
             +  + +   G +         +  +             G ++  NV++  E  ++   
Sbjct: 347 QFANAQGLSKQGNLLYAATTNSGAPQLGSPGAAGLGQLVGGALESSNVSIGSELTNLVVA 406

Query: 108 NRLYMANLQTIKQSHDMMTTTLDL 131
              Y AN + ++ +  ++ + + +
Sbjct: 407 QTDYQANTKVVQTTATVLQSLVQM 430


>gi|218528944|ref|YP_002419760.1| flagellar hook-associated protein FlgK [Methylobacterium
           chloromethanicum CM4]
 gi|218521247|gb|ACK81832.1| flagellar hook-associated protein FlgK [Methylobacterium
           chloromethanicum CM4]
          Length = 632

 Score = 43.7 bits (101), Expect = 0.009,   Method: Composition-based stats.
 Identities = 13/84 (15%), Positives = 28/84 (33%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                      G + V+      +  ++E                  VN+  E +++   
Sbjct: 549 PTRSSVADFVQGVISVQGAAAAAAQDLDEGQSIALSTAQGRFASASGVNIDEEMSNLIAL 608

Query: 108 NRLYMANLQTIKQSHDMMTTTLDL 131
            + Y AN + +  + DM+ T L +
Sbjct: 609 QQAYAANARVLTAARDMIDTLLRI 632


>gi|46203395|ref|ZP_00051590.2| COG1749: Flagellar hook protein FlgE [Magnetospirillum
          magnetotacticum MS-1]
          Length = 293

 Score = 43.7 bits (101), Expect = 0.009,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 27/71 (38%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            LI       SG+  QS R+  ++ENI NA TTG    S  +    +   +V   + G 
Sbjct: 1  MSLIGVLRTGVSGMNAQSNRISTVAENIQNANTTGYKRTSAEFSSLLLDSGDVGTYNSGA 60

Query: 62 RVKKIGVDQST 72
              +      
Sbjct: 61 VETTLRRSIGE 71


>gi|260768781|ref|ZP_05877715.1| flagellar basal-body rod protein FlgF [Vibrio furnissii CIP 102972]
 gi|260616811|gb|EEX41996.1| flagellar basal-body rod protein FlgF [Vibrio furnissii CIP 102972]
          Length = 229

 Score = 43.7 bits (101), Expect = 0.009,   Method: Composition-based stats.
 Identities = 22/108 (20%), Positives = 38/108 (35%)

Query: 26  SENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVAN 85
           + NIA+      TP       +    + V      + +   G+      E       VA 
Sbjct: 121 AINIASDGAISITPPGGGAEMQIGLLKLVNPEYAEMTLHTSGLFVPKQGETLAFDPEVAV 180

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            SG ++  NV+ L E   M    R Y   ++ +  + ++      LLR
Sbjct: 181 RSGYLEGSNVSSLDELVSMMALTRQYEMQVKAMASASEIEKMGNQLLR 228


>gi|255030384|ref|ZP_05302335.1| flagellar hook protein FlgE [Listeria monocytogenes LO28]
          Length = 189

 Score = 43.7 bits (101), Expect = 0.009,   Method: Composition-based stats.
 Identities = 15/105 (14%), Positives = 35/105 (33%)

Query: 29  IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASG 88
           IA + + G           T S E+ +   G                          +  
Sbjct: 85  IAVSYSDGTVIPVAQLAVATFSNEDGLVKMGNGEYVPGLSSGDAVYGVAGQNGAGGISGS 144

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NV++  E  ++      +  N + I+ + D+M   ++L++
Sbjct: 145 SLEGSNVDLSREFVNLMTYQSGFQGNTKVIRVADDVMKQIVNLIQ 189


>gi|289670509|ref|ZP_06491584.1| flagellar basal body rod protein FlgF [Xanthomonas campestris pv.
           musacearum NCPPB4381]
          Length = 141

 Score = 43.7 bits (101), Expect = 0.009,   Method: Composition-based stats.
 Identities = 19/112 (16%), Positives = 38/112 (33%)

Query: 22  MQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGH 81
           M+I S+   +    G+ P +     K    +             +    +   + F    
Sbjct: 27  MEIGSDGSISIIPQGEGPQTMAIVGKMKVVDAPADRLTRRPDGLMRNTSTDPAQAFAVAT 86

Query: 82  PVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
                SG+++  NV+      +M +  R +   ++ IK   D   +   LLR
Sbjct: 87  GKTINSGMLEGSNVDAAGALVEMIQLQRQFEMQVKIIKNGDDNAQSANSLLR 138


>gi|255654320|ref|ZP_05399729.1| putative flagellar hook-associated protein [Clostridium difficile
           QCD-23m63]
          Length = 315

 Score = 43.7 bits (101), Expect = 0.009,   Method: Composition-based stats.
 Identities = 5/38 (13%), Positives = 18/38 (47%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             V++  E  ++ +  R Y A+ + +  +  ++   ++
Sbjct: 275 SGVSLDEEMTELIKIQRSYQASAKVMSTAVQLLDVVIN 312


>gi|251799752|ref|YP_003014483.1| hypothetical protein Pjdr2_5791 [Paenibacillus sp. JDR-2]
 gi|247547378|gb|ACT04397.1| protein of unknown function DUF1078 domain protein [Paenibacillus
           sp. JDR-2]
          Length = 275

 Score = 43.7 bits (101), Expect = 0.009,   Method: Composition-based stats.
 Identities = 17/115 (14%), Positives = 37/115 (32%)

Query: 19  SARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFD 78
                  +E +A   +T +       +    +   ++  +       I V         +
Sbjct: 161 RVNADGTAEGVATDGSTIELGSIKLVQATRPAALTLVADNLYEIADGINVADVLQNVTPN 220

Query: 79  PGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             + +A   G ++  NVN+  E  ++    R Y    + +  S  MM     L +
Sbjct: 221 GENGIALRQGALEQSNVNLGDEMTELINVQRAYQMAARALTSSDTMMGLANSLRK 275


>gi|312877567|ref|ZP_07737526.1| flagellar hook-associated protein FlgK [Caldicellulosiruptor
           lactoaceticus 6A]
 gi|311795642|gb|EFR12012.1| flagellar hook-associated protein FlgK [Caldicellulosiruptor
           lactoaceticus 6A]
          Length = 522

 Score = 43.7 bits (101), Expect = 0.009,   Method: Composition-based stats.
 Identities = 6/38 (15%), Positives = 18/38 (47%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             V++  E  ++ +    + A+ + I    +M+ T ++
Sbjct: 478 SGVSIDEEMTNLIKYQHGFQASARMINAFDEMLDTIVN 515



 Score = 35.6 bits (80), Expect = 2.4,   Method: Composition-based stats.
 Identities = 17/103 (16%), Positives = 34/103 (33%), Gaps = 2/103 (1%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
                IA +G+ V    +++ S N+ANA T G T        K+      +         
Sbjct: 3   FYGLEIARTGIFVNRKGLEVTSHNVANASTPGYT--RQVLNVKSNPPSSKVGFYSPKFQV 60

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
            +G D  +  +  D    +   +   +     +  +  +  E 
Sbjct: 61  GMGADVQSLEQIRDMFLDMQYRNEYSRQGEYEIKADNLNFIEA 103


>gi|254559638|ref|YP_003066733.1| flagellar hook-associated protein 1 FlgK [Methylobacterium
           extorquens DM4]
 gi|254266916|emb|CAX22715.1| putative flagellar hook-associated protein 1 FlgK [Methylobacterium
           extorquens DM4]
          Length = 632

 Score = 43.7 bits (101), Expect = 0.009,   Method: Composition-based stats.
 Identities = 13/84 (15%), Positives = 28/84 (33%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                      G + V+      +  ++E                  VN+  E +++   
Sbjct: 549 PTRSSVADFVQGVISVQGAAAAAAQDLDEGQSIALSTAQGRFASASGVNIDEEMSNLIAL 608

Query: 108 NRLYMANLQTIKQSHDMMTTTLDL 131
            + Y AN + +  + DM+ T L +
Sbjct: 609 QQAYAANARVLTAARDMIDTLLRI 632


>gi|315180484|gb|ADT87398.1| hypothetical flagellar basal-body rod protein [Vibrio furnissii
           NCTC 11218]
          Length = 244

 Score = 43.7 bits (101), Expect = 0.009,   Method: Composition-based stats.
 Identities = 22/108 (20%), Positives = 38/108 (35%)

Query: 26  SENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVAN 85
           + NIA+      TP       +    + V      + +   G+      E       VA 
Sbjct: 136 AINIASDGAISITPPGGGAEMQIGLLKLVNPEYADMTLHTSGLFVPKQGETLAFDPEVAV 195

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            SG ++  NV+ L E   M    R Y   ++ +  + ++      LLR
Sbjct: 196 RSGYLEGSNVSSLDELVSMMALTRQYEMQVKAMASASEIEKMGNQLLR 243


>gi|300854230|ref|YP_003779214.1| flagellar basal-body rod protein [Clostridium ljungdahlii DSM
           13528]
 gi|300434345|gb|ADK14112.1| flagellar basal-body rod protein [Clostridium ljungdahlii DSM
           13528]
          Length = 255

 Score = 43.7 bits (101), Expect = 0.009,   Method: Composition-based stats.
 Identities = 16/121 (13%), Positives = 43/121 (35%), Gaps = 3/121 (2%)

Query: 11  ANSGLAVQSARMQIISE-NIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVD 69
           A   +  ++ R   + E N+ N   T D  G+             +  +    + K+G  
Sbjct: 132 AGDSVLARNTRTGALGEMNVGNGNMTSDDHGNINIDGTPSYKLYTVDFNDYNTLTKVG-- 189

Query: 70  QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
            + +         V      ++  NVN++   + +  T R +  + + ++   + +   +
Sbjct: 190 DNLYTGTNAAETNVVVRQKSLEKSNVNIVNTMSQLMTTMRSFETDQKAVQSIDETLEKLI 249

Query: 130 D 130
           +
Sbjct: 250 N 250



 Score = 36.8 bits (83), Expect = 1.0,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 27/62 (43%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I S + A SG+  Q A+  +I+ N+ANA T G        +       +    + G R 
Sbjct: 1  MIRSFYSAVSGMITQEAKQDVITNNLANANTVGFKQDDLRVKSFNDMLLQNYDKTEGNRS 60

Query: 64 KK 65
           +
Sbjct: 61 VR 62


>gi|255523680|ref|ZP_05390646.1| flagellar basal body rod protein [Clostridium carboxidivorans P7]
 gi|255512549|gb|EET88823.1| flagellar basal body rod protein [Clostridium carboxidivorans P7]
          Length = 259

 Score = 43.7 bits (101), Expect = 0.009,   Method: Composition-based stats.
 Identities = 8/58 (13%), Positives = 22/58 (37%)

Query: 73  FVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           +       +        ++  N+NV+ E   M  T R +  N + ++   + ++   +
Sbjct: 196 YQGTNPTENAAVVRQKSLEKSNINVINEMVSMMTTMRTFETNQKVVQALDETLSKAAN 253



 Score = 37.2 bits (84), Expect = 0.87,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 28/64 (43%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I S + A SG+  Q A+  +I+ N+ANA T G    +   ++      +      G + 
Sbjct: 1  MIRSLYTAVSGMITQEAKQDVITNNLANATTVGFKGDNLAVKKFDDVLLQNYDKIVGGKN 60

Query: 64 KKIG 67
           +  
Sbjct: 61 VRNV 64


>gi|163850384|ref|YP_001638427.1| flagellar hook-associated protein FlgK [Methylobacterium extorquens
           PA1]
 gi|163661989|gb|ABY29356.1| flagellar hook-associated protein FlgK [Methylobacterium extorquens
           PA1]
          Length = 632

 Score = 43.7 bits (101), Expect = 0.009,   Method: Composition-based stats.
 Identities = 13/84 (15%), Positives = 28/84 (33%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                      G + V+      +  ++E                  VN+  E +++   
Sbjct: 549 PTRSSVADFVQGVISVQGAAAAAAQDLDEGQSIALSTAQGRFASASGVNIDEEMSNLIAL 608

Query: 108 NRLYMANLQTIKQSHDMMTTTLDL 131
            + Y AN + +  + DM+ T L +
Sbjct: 609 QQAYAANARVLTAARDMIDTLLRI 632


>gi|58039490|ref|YP_191454.1| flagellar hook protein FlgE [Gluconobacter oxydans 621H]
 gi|58001904|gb|AAW60798.1| Flagellar hook protein FlgE [Gluconobacter oxydans 621H]
          Length = 411

 Score = 43.7 bits (101), Expect = 0.009,   Method: Composition-based stats.
 Identities = 11/100 (11%), Positives = 33/100 (33%)

Query: 34  TTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
             G +         T +    +    G          S  +   +        +G ++  
Sbjct: 312 DNGYSQLVAKIPLTTFADPNSLSAQNGQAYTATSQSGSPQINAVNTNGAGTLTTGSIEES 371

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             ++  + + +    + Y AN + +  +  ++ TTL +++
Sbjct: 372 TTDLTGDLSKLIVAQQAYGANTKVVSTADQLLQTTLAMIQ 411



 Score = 36.0 bits (81), Expect = 1.9,   Method: Composition-based stats.
 Identities = 17/44 (38%), Positives = 24/44 (54%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          M  +I + H A SGL  QS     +S NIAN++TTG    +  +
Sbjct: 1  MSSIINAVHTAVSGLNAQSHAFTDLSNNIANSQTTGYKASTTSF 44


>gi|51894143|ref|YP_076834.1| flagellar basal body and hook proteins [Symbiobacterium
           thermophilum IAM 14863]
 gi|51857832|dbj|BAD41990.1| flagellar basal body and hook proteins [Symbiobacterium
           thermophilum IAM 14863]
          Length = 231

 Score = 43.7 bits (101), Expect = 0.009,   Method: Composition-based stats.
 Identities = 8/45 (17%), Positives = 22/45 (48%), Gaps = 1/45 (2%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL-DLLR 133
           ++  NV++  E  D+  T R Y  N + ++   + +   + ++ +
Sbjct: 186 LEASNVDLAKEMTDLIVTLRAYQVNQRALRVQDETLARAVTEIGK 230



 Score = 36.8 bits (83), Expect = 1.1,   Method: Composition-based stats.
 Identities = 19/81 (23%), Positives = 33/81 (40%), Gaps = 12/81 (14%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDP------------YRRKTISF 51
          +I     + SG+AV+  R  ++++NIAN  T+G    +                      
Sbjct: 1  MIRGIEASRSGMAVEQLRTDVLADNIANMNTSGFKRATATSVEFDRMLIHRMGDPTDPRS 60

Query: 52 EEVMHGSGGVRVKKIGVDQST 72
          +EV     G RV ++ VD+  
Sbjct: 61 QEVGTLGNGSRVDQVVVDERQ 81


>gi|310659663|ref|YP_003937384.1| flagellar basal body rod protein [Clostridium sticklandii DSM 519]
 gi|308826441|emb|CBH22479.1| putative Flagellar basal body rod protein [Clostridium sticklandii]
          Length = 372

 Score = 43.7 bits (101), Expect = 0.009,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 25/48 (52%), Gaps = 1/48 (2%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD-LLR 133
            G ++  NV+++ E A+M    R Y +  + I+   D+M+   + + +
Sbjct: 324 QGYLEGSNVDIISEMAEMINLLRGYESGQKVIRSYDDIMSKAANEIGK 371



 Score = 34.8 bits (78), Expect = 3.6,   Method: Composition-based stats.
 Identities = 16/94 (17%), Positives = 38/94 (40%), Gaps = 3/94 (3%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPG---SDPYRRKTISFEEVMHGSGG 60
          +    + A +G+   S R+ +I+ NIAN++TT        ++ +  + +     +  +  
Sbjct: 1  MFRGIYTATNGMRTDSKRIDVITSNIANSQTTAFKKDVLVTESFPEQLMVKLNGVENNLR 60

Query: 61 VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPN 94
             + + VD     +  D    +   SG  +  +
Sbjct: 61 PTRQLVNVDPPADFQTNDSIVSIEITSGYFRMED 94


>gi|89068730|ref|ZP_01156116.1| flagellar basal-body rod protein FlgF [Oceanicola granulosus
           HTCC2516]
 gi|89045693|gb|EAR51755.1| flagellar basal-body rod protein FlgF [Oceanicola granulosus
           HTCC2516]
          Length = 248

 Score = 43.7 bits (101), Expect = 0.009,   Method: Composition-based stats.
 Identities = 14/108 (12%), Positives = 30/108 (27%)

Query: 23  QIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHP 82
             ++E +     T  +P +    R  +     +     +            V    P   
Sbjct: 136 DAVAELVIADDGTLSSPATGALGRLGVFDVPDLKSYTRIGAGMFVAPAEADVAAPLPDLA 195

Query: 83  VANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
                G ++  NV  +VE   M    + Y    + +    ++    L 
Sbjct: 196 TKVVQGALEGSNVQPIVEMTRMMAIQKSYEQATKLMGTGDELRKDALR 243


>gi|84388092|ref|ZP_00990988.1| polar flagellar FlgF [Vibrio splendidus 12B01]
 gi|84377159|gb|EAP94029.1| polar flagellar FlgF [Vibrio splendidus 12B01]
          Length = 249

 Score = 43.7 bits (101), Expect = 0.009,   Method: Composition-based stats.
 Identities = 11/61 (18%), Positives = 27/61 (44%)

Query: 73  FVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
             + ++    V    G ++  NVN + E   + +  R +   ++ +  + +M  ++  LL
Sbjct: 187 PDQAYEADAAVTLLKGAIEGSNVNAVGEMTSLIDLQRQFEMQVKMMSTAEEMDKSSDSLL 246

Query: 133 R 133
           R
Sbjct: 247 R 247


>gi|182418329|ref|ZP_02949624.1| flagellar hook protein FlgE [Clostridium butyricum 5521]
 gi|237666973|ref|ZP_04526958.1| flagellar basal body rod protein [Clostridium butyricum E4 str.
           BoNT E BL5262]
 gi|182377711|gb|EDT75255.1| flagellar hook protein FlgE [Clostridium butyricum 5521]
 gi|237658172|gb|EEP55727.1| flagellar basal body rod protein [Clostridium butyricum E4 str.
           BoNT E BL5262]
          Length = 255

 Score = 43.7 bits (101), Expect = 0.010,   Method: Composition-based stats.
 Identities = 22/131 (16%), Positives = 37/131 (28%), Gaps = 20/131 (15%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENI-ANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           D    S +IA  G          IS NI  N    G  P       K    +        
Sbjct: 143 DPAFDSDNIAIDG-------QGGISMNIDGNVALVGSIPVFTAIGDKGFVPKGNNMFVPS 195

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
              +    D                  G ++  NV+     +D+  T R +  + + I  
Sbjct: 196 DDAQITLSDDYDIR------------QGFLEASNVDAAEVFSDVILTQRAFQLSSKAITT 243

Query: 121 SHDMMTTTLDL 131
           + D+ +    +
Sbjct: 244 ADDIWSMINSM 254


>gi|254785373|ref|YP_003072802.1| flagellar basal body rod protein FlgF [Teredinibacter turnerae
           T7901]
 gi|237683950|gb|ACR11214.1| flagellar basal-body rod protein FlgF [Teredinibacter turnerae
           T7901]
          Length = 250

 Score = 43.7 bits (101), Expect = 0.010,   Method: Composition-based stats.
 Identities = 15/93 (16%), Positives = 29/93 (31%)

Query: 41  SDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVE 100
             P +   I        +    +  +         E      V   SG V+  NVN + E
Sbjct: 155 DAPVQVDRIKLVNPPTDTIQRGIDGLIHLLDDAQGELPADGNVRIISGFVEGSNVNAVNE 214

Query: 101 TADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
              +    R Y   ++ ++   +    +  LL+
Sbjct: 215 LTSVMSLARQYEMQVKIMQTVKEDSEASARLLQ 247


>gi|225850286|ref|YP_002730520.1| flagellar basal-body rod protein FlgF [Persephonella marina EX-H1]
 gi|225645268|gb|ACO03454.1| flagellar basal-body rod protein FlgF [Persephonella marina EX-H1]
          Length = 238

 Score = 43.3 bits (100), Expect = 0.010,   Method: Composition-based stats.
 Identities = 5/52 (9%), Positives = 18/52 (34%)

Query: 82  PVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             +   G ++  N N +    ++    R +      ++    M   + ++ +
Sbjct: 186 DYSLKQGFLEQSNTNGIEAMIELINAQRRFEIYGNLMRSLDAMEQKSNEIGK 237


>gi|289523333|ref|ZP_06440187.1| flagellar basal-body rod protein FlgG [Anaerobaculum
           hydrogeniformans ATCC BAA-1850]
 gi|289503025|gb|EFD24189.1| flagellar basal-body rod protein FlgG [Anaerobaculum
           hydrogeniformans ATCC BAA-1850]
          Length = 256

 Score = 43.3 bits (100), Expect = 0.010,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 23/59 (38%)

Query: 72  TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
               E           G ++  NVNV+ E   + E  R Y A+ +T+    +   + ++
Sbjct: 194 EAAGEPVLVETPMLVPGALEKSNVNVVYEMVRLIEGQRAYEASARTLTMQDEQTGSMIN 252



 Score = 33.7 bits (75), Expect = 9.2,   Method: Composition-based stats.
 Identities = 10/33 (30%), Positives = 17/33 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          +    + A+S + VQ   + + S N+AN  T G
Sbjct: 1  MFRGLYGASSAMLVQEKVIDVASNNLANVDTAG 33


>gi|15895480|ref|NP_348829.1| flagellar hook-associated protein FlgK [Clostridium
          acetobutylicum ATCC 824]
 gi|15025209|gb|AAK80169.1|AE007721_9 Flagellar hook-associated protein FlgK [Clostridium
          acetobutylicum ATCC 824]
 gi|325509627|gb|ADZ21263.1| Flagellar hook-associated protein FlgK [Clostridium
          acetobutylicum EA 2018]
          Length = 634

 Score = 43.3 bits (100), Expect = 0.010,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 28/67 (41%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  L  + +I  SGL V    + +   NI+NA T G +      + ++      ++ + G
Sbjct: 1  MPGLFGTLNIGVSGLTVNQQAIDVTGHNISNASTDGYSRQRVDIQTRSPYGMPSLNSAAG 60

Query: 61 VRVKKIG 67
            +   G
Sbjct: 61 PGLFGTG 67



 Score = 40.2 bits (92), Expect = 0.087,   Method: Composition-based stats.
 Identities = 6/41 (14%), Positives = 19/41 (46%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             V++  E  ++ + +  Y A+ + I     ++   ++ L+
Sbjct: 593 SGVSLDEEMTNLIQYSHGYQASAKIISTVDQLLDVVVNNLK 633


>gi|116626183|ref|YP_828339.1| flagellar hook-associated protein FlgK [Candidatus Solibacter
           usitatus Ellin6076]
 gi|116229345|gb|ABJ88054.1| flagellar hook-associated protein FlgK [Candidatus Solibacter
           usitatus Ellin6076]
          Length = 475

 Score = 43.3 bits (100), Expect = 0.010,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 22/43 (51%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +Y  V++  E   + +  R Y AN + +    ++  T +D+L+
Sbjct: 432 QYQGVSLDEEATTLMQFQRAYQANAKYLSVLDELTQTAIDILK 474


>gi|313624712|gb|EFR94667.1| flagellar hook protein FlgE [Listeria innocua FSL J1-023]
          Length = 411

 Score = 43.3 bits (100), Expect = 0.010,   Method: Composition-based stats.
 Identities = 15/105 (14%), Positives = 35/105 (33%)

Query: 29  IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASG 88
           IA + + G           T S E+ +   G                          +  
Sbjct: 307 IAVSYSDGTVIPVAQLAVATFSNEDGLVKMGNGEYVPGLSSGDAVYGVAGQNGAGGISGS 366

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NV++  E  ++      +  N + I+ + D+M   ++L++
Sbjct: 367 SLEGSNVDLSREFVNLMTYQSGFQGNTKVIRVADDVMKQIVNLIQ 411



 Score = 38.7 bits (88), Expect = 0.27,   Method: Composition-based stats.
 Identities = 16/93 (17%), Positives = 36/93 (38%), Gaps = 7/93 (7%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +  + + A SG+      + + S NIANA TTG       Y+++++ F ++++ +    V
Sbjct: 1  MNQTMYTAISGMNAFQQALSVTSNNIANANTTG-------YKKQSVVFNDLLYQNTMGSV 53

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVN 96
                 +  +         A  +        +
Sbjct: 54 AGGLYAGTNPMSFGSGSKIGAILTDYTAGSPTS 86


>gi|224170008|ref|XP_002339332.1| predicted protein [Populus trichocarpa]
 gi|222874887|gb|EEF12018.1| predicted protein [Populus trichocarpa]
          Length = 251

 Score = 43.3 bits (100), Expect = 0.010,   Method: Composition-based stats.
 Identities = 16/116 (13%), Positives = 33/116 (28%), Gaps = 6/116 (5%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFV 74
           L     R+     NI +    G T       +   + +       G  +  I        
Sbjct: 137 LQSSQVRIDAQG-NIFDGDGVGRTDRPVAQLKVVEAPQPSQLRRLGEGLMSIDGQPGQL- 194

Query: 75  EEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
                   +    G V+  NV+ + E   + +T R + +  +      +M    + 
Sbjct: 195 ----ADADIRIQQGFVENSNVSSMHEMVQLMQTMRHFESMQKVALGYDEMTGQAIR 246


>gi|86146154|ref|ZP_01064480.1| polar flagellar FlgF [Vibrio sp. MED222]
 gi|218708805|ref|YP_002416426.1| flagellar basal body rod protein FlgF [Vibrio splendidus LGP32]
 gi|85836101|gb|EAQ54233.1| polar flagellar FlgF [Vibrio sp. MED222]
 gi|218321824|emb|CAV17794.1| Flagellar basal-body rod protein flgF [Vibrio splendidus LGP32]
          Length = 249

 Score = 43.3 bits (100), Expect = 0.010,   Method: Composition-based stats.
 Identities = 11/61 (18%), Positives = 27/61 (44%)

Query: 73  FVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
             + ++    V    G ++  NVN + E   + +  R +   ++ +  + +M  ++  LL
Sbjct: 187 PDQAYEADAAVTLLKGAIEGSNVNAVGEMTSLIDLQRQFEMQVKMMSTAEEMDKSSDSLL 246

Query: 133 R 133
           R
Sbjct: 247 R 247


>gi|289804815|ref|ZP_06535444.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Typhi str. AG3]
          Length = 134

 Score = 43.3 bits (100), Expect = 0.010,   Method: Composition-based stats.
 Identities = 14/102 (13%), Positives = 29/102 (28%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           N     +T       +   +    +  S     +     Q+           +   SG++
Sbjct: 30  NPGDPPNTVAPVGRLKLVKAEGNEVQRSDDGLFRLTAEAQAERGAVLAADPSIRIMSGVL 89

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NV  +    DM    R +   ++ I    +       LL
Sbjct: 90  EGSNVKPVEAMTDMIANARRFEMQMKVITSVDENEGRANQLL 131


>gi|317133466|ref|YP_004092780.1| flagellar hook-basal body protein [Ethanoligenens harbinense
           YUAN-3]
 gi|315471445|gb|ADU28049.1| flagellar hook-basal body protein [Ethanoligenens harbinense
           YUAN-3]
          Length = 234

 Score = 43.3 bits (100), Expect = 0.010,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 20/45 (44%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            G  +  NV++  E  +M  T R +  N + +  +  + +   DL
Sbjct: 189 QGAYETSNVDLSSEMGNMIVTQRGFQMNARVVSTADQIESYVNDL 233


>gi|94263281|ref|ZP_01287097.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
 gi|93456364|gb|EAT06488.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
          Length = 879

 Score = 43.3 bits (100), Expect = 0.010,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 38/124 (30%), Gaps = 7/124 (5%)

Query: 15  LAVQSARMQ--IISENIANA---RTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVD 69
           LA    R    + + +  NA                 +T S     +   G    K    
Sbjct: 758 LAAGQVRDDGQVYAGDNTNALEISNLQHKDNIKFEGGRTNSLNGFYNSLIGDIGNKGRTI 817

Query: 70  QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
                      + +      V    V++  E A++ +    Y A  + I  S +M+ T L
Sbjct: 818 GRNLEFNELVLNQMNEMRDAV--SGVSLDEEMANLIKFQHAYTAAARMISMSDEMLVTLL 875

Query: 130 DLLR 133
           D +R
Sbjct: 876 DTVR 879



 Score = 35.6 bits (80), Expect = 2.5,   Method: Composition-based stats.
 Identities = 18/99 (18%), Positives = 30/99 (30%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  +    ++A   L    + +Q+   N+AN  T G T         T          GG
Sbjct: 1  MSGITHVLNLAKQALLTHQSSIQVAGHNVANVDTPGYTRQKINIEANTAFPSAAGIMGGG 60

Query: 61 VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
          V    I      F+ E          +   +   + V+ 
Sbjct: 61 VLADGIARQYDQFMVERIAKQSSLMGNLEAQQQALRVVE 99


>gi|240137460|ref|YP_002961931.1| putative flagellar hook-associated protein 1 FlgK [Methylobacterium
           extorquens AM1]
 gi|240007428|gb|ACS38654.1| putative flagellar hook-associated protein 1 FlgK [Methylobacterium
           extorquens AM1]
          Length = 632

 Score = 43.3 bits (100), Expect = 0.010,   Method: Composition-based stats.
 Identities = 13/84 (15%), Positives = 28/84 (33%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                      G + V+      +  ++E                  VN+  E +++   
Sbjct: 549 PTRSSVADFVQGVISVQGAAAAAAQDLDEGQSIALSTAQGRFASASGVNIDEEMSNLIAL 608

Query: 108 NRLYMANLQTIKQSHDMMTTTLDL 131
            + Y AN + +  + DM+ T L +
Sbjct: 609 QQAYAANARVLTAARDMIDTLLRI 632


>gi|238782793|ref|ZP_04626822.1| Flagellar basal-body rod protein flgF [Yersinia bercovieri ATCC
           43970]
 gi|238716216|gb|EEQ08199.1| Flagellar basal-body rod protein flgF [Yersinia bercovieri ATCC
           43970]
          Length = 251

 Score = 43.3 bits (100), Expect = 0.010,   Method: Composition-based stats.
 Identities = 14/101 (13%), Positives = 28/101 (27%)

Query: 32  ARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVK 91
           A             +   +  + +               +  +        +  A G ++
Sbjct: 148 AGEEPSALAQVGRLKLVNARLQDLRHGDDGLFHIAETSPNAGLMALPADQSLQLAPGALE 207

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
             NV+ +    DM  T R +  N++ I    D       LL
Sbjct: 208 SSNVSPVKSMVDMIATARGFDMNIKVISAVDDNEKKANQLL 248


>gi|168180937|ref|ZP_02615601.1| flagellar basal body rod protein [Clostridium botulinum NCTC 2916]
 gi|182668349|gb|EDT80328.1| flagellar basal body rod protein [Clostridium botulinum NCTC 2916]
          Length = 255

 Score = 43.3 bits (100), Expect = 0.010,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 20/45 (44%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
               ++  NVNV  E   M  T R +  N + ++   + +  T++
Sbjct: 205 RQNSLEKSNVNVTNEMVTMLTTMRSFETNQKIVQSIDETLGKTVN 249


>gi|114777912|ref|ZP_01452826.1| probable flagellar hook-associated protein [Mariprofundus
          ferrooxydans PV-1]
 gi|114551699|gb|EAU54251.1| probable flagellar hook-associated protein [Mariprofundus
          ferrooxydans PV-1]
          Length = 575

 Score = 43.3 bits (100), Expect = 0.010,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 28/83 (33%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +  S +IA S L  Q   + ++S NIANA T G +         T      +    GV V
Sbjct: 2  IFDSLNIAASSLQTQQKSINVVSHNIANANTAGYSRQVADIATLTPESVGGLSLGRGVNV 61

Query: 64 KKIGVDQSTFVEEFDPGHPVANA 86
            I       +      +     
Sbjct: 62 TGISRIVDPMINSALSNNGSQMN 84



 Score = 42.6 bits (98), Expect = 0.019,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 20/41 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             VN   E   M +  R Y A+ + I  ++ MM + L L+R
Sbjct: 535 SGVNTDEELVSMIKFQRAYEASAKIITTTNQMMDSLLGLIR 575


>gi|323137001|ref|ZP_08072081.1| fagellar hook-basal body protein [Methylocystis sp. ATCC 49242]
 gi|322397762|gb|EFY00284.1| fagellar hook-basal body protein [Methylocystis sp. ATCC 49242]
          Length = 417

 Score = 43.3 bits (100), Expect = 0.010,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 22/43 (51%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           ++  NV++  E + M    R Y AN Q+ + + +++    +L 
Sbjct: 375 LEASNVDLATELSTMIIAQRSYTANTQSFQVASEILQVLNNLK 417



 Score = 37.2 bits (84), Expect = 0.72,   Method: Composition-based stats.
 Identities = 17/78 (21%), Positives = 27/78 (34%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M       + +  G++ QS  +  ISENIAN+ T G    +  +      F+      GG
Sbjct: 1  MSSTFGLFNTSIMGMSAQSDALANISENIANSGTVGYKRATTHFLTVLSGFQGSNQFGGG 60

Query: 61 VRVKKIGVDQSTFVEEFD 78
          V  +              
Sbjct: 61 VSTRSRYDITGQGALMHT 78


>gi|304321121|ref|YP_003854764.1| flagellar hook-associated protein [Parvularcula bermudensis
          HTCC2503]
 gi|303300023|gb|ADM09622.1| flagellar hook-associated protein [Parvularcula bermudensis
          HTCC2503]
          Length = 481

 Score = 43.3 bits (100), Expect = 0.010,   Method: Composition-based stats.
 Identities = 24/67 (35%), Positives = 32/67 (47%), Gaps = 7/67 (10%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
              ++  IANSGLA  S R Q  + NIANA   G       Y R+ +   E + GS G+
Sbjct: 1  MSFSSALSIANSGLAAASIRAQTTASNIANATVEG-------YSRRDVVLSERVVGSTGI 53

Query: 62 RVKKIGV 68
           V  +G 
Sbjct: 54 GVSVVGT 60



 Score = 34.8 bits (78), Expect = 3.6,   Method: Composition-based stats.
 Identities = 8/39 (20%), Positives = 16/39 (41%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
            V+   E   +    + Y AN + I+   +M+   + L 
Sbjct: 443 GVDTDRELQQLLLIEQAYGANARVIQTIDEMLDILMRLG 481


>gi|315125990|ref|YP_004067993.1| lateral flagellar hook-associated protein [Pseudoalteromonas sp.
           SM9913]
 gi|315014504|gb|ADT67842.1| lateral flagellar hook-associated protein [Pseudoalteromonas sp.
           SM9913]
          Length = 435

 Score = 43.3 bits (100), Expect = 0.011,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 20/40 (50%)

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           Y  VN+  E A++    ++Y AN + I  +  M  + L +
Sbjct: 395 YSGVNLDEEAANLMHFQQMYSANAKVISTADQMFKSLLQM 434


>gi|154253004|ref|YP_001413828.1| flagellar basal body rod protein [Parvibaculum lavamentivorans
           DS-1]
 gi|154156954|gb|ABS64171.1| flagellar basal body rod protein [Parvibaculum lavamentivorans
           DS-1]
          Length = 256

 Score = 43.3 bits (100), Expect = 0.011,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 25/56 (44%)

Query: 75  EEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           +E  P   +    G ++  NVN ++E  +M E  R Y +  + I Q+  M    + 
Sbjct: 195 QEEVPAENIRLVQGALEGSNVNPILEMTNMIEVTRSYASAQKLIDQADQMRRKAIQ 250


>gi|170737039|ref|YP_001778299.1| flagellar basal-body rod protein FlgF [Burkholderia cenocepacia
           MC0-3]
 gi|169819227|gb|ACA93809.1| flagellar basal-body rod protein FlgF [Burkholderia cenocepacia
           MC0-3]
          Length = 241

 Score = 43.3 bits (100), Expect = 0.011,   Method: Composition-based stats.
 Identities = 10/57 (17%), Positives = 21/57 (36%)

Query: 77  FDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +     V    G ++  NV+ + E        R +   ++  K + +M      L+R
Sbjct: 184 YAADDSVTVKGGHLEASNVSAVEEMMQTMSLTRSFEMQMKLYKVADEMADAGNRLIR 240


>gi|289433975|ref|YP_003463847.1| flagellar hook protein FlgE, putative [Listeria seeligeri serovar
           1/2b str. SLCC3954]
 gi|289170219|emb|CBH26759.1| flagellar hook protein FlgE, putative [Listeria seeligeri serovar
           1/2b str. SLCC3954]
 gi|313634374|gb|EFS00969.1| flagellar hook protein FlgE [Listeria seeligeri FSL N1-067]
 gi|313639059|gb|EFS04046.1| flagellar hook protein FlgE [Listeria seeligeri FSL S4-171]
          Length = 411

 Score = 43.3 bits (100), Expect = 0.011,   Method: Composition-based stats.
 Identities = 15/105 (14%), Positives = 35/105 (33%)

Query: 29  IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASG 88
           IA + + G           T S E+ +   G                          +  
Sbjct: 307 IAVSYSDGTVIPVAQLAVATFSNEDGLVKMGNGEYVPGLSSGDAVYGVAGQNGAGGISGS 366

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NV++  E  ++      +  N + I+ + D+M   ++L++
Sbjct: 367 SLEGSNVDLSREFVNLMTYQSGFQGNTKVIRVADDVMKQIVNLIQ 411



 Score = 38.3 bits (87), Expect = 0.32,   Method: Composition-based stats.
 Identities = 16/93 (17%), Positives = 36/93 (38%), Gaps = 7/93 (7%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +  + + A SG+      + + S NIANA TTG       Y+++++ F ++++ +    V
Sbjct: 1  MNQTMYTAISGMNAFQQALSVTSNNIANANTTG-------YKKQSVVFNDLLYQNTMGSV 53

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVN 96
                 +  +         A  +        +
Sbjct: 54 AGGLYAGTNPMSFGSGAKIGAILTDYTAGSPTS 86


>gi|251772413|gb|EES52980.1| flagellar basal body rod protein [Leptospirillum ferrodiazotrophum]
          Length = 265

 Score = 43.3 bits (100), Expect = 0.011,   Method: Composition-based stats.
 Identities = 18/94 (19%), Positives = 33/94 (35%)

Query: 37  DTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVN 96
           D+ G      K +    +   +G +       D   F  +          +G V+  NV 
Sbjct: 166 DSAGKVFSGEKVVGQLAISAPAGPMEHLTKVGDGLFFSPDGLVKGEAVVRNGGVEGSNVK 225

Query: 97  VLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
              E   M +  R Y  +LQ +   +D+   T++
Sbjct: 226 GTSEMVRMIQGMRTYQTDLQALHTLNDLTNRTVN 259



 Score = 36.0 bits (81), Expect = 1.9,   Method: Composition-based stats.
 Identities = 15/83 (18%), Positives = 22/83 (26%), Gaps = 3/83 (3%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSD---PYRRKTISFEEVMHGSGGVRVKKIGVD 69
          SG   Q   M ++S N+AN  T G          Y               G  +   G  
Sbjct: 10 SGAQGQEQMMDVLSSNLANVNTPGFRKDRVMFRSYLPHREYLHRTPPDRPGFNLTPFGTF 69

Query: 70 QSTFVEEFDPGHPVANASGIVKY 92
           + +                V+Y
Sbjct: 70 PTPWGMAGSDIPHSGVDRIYVRY 92


>gi|157373201|ref|YP_001471801.1| flagellar hook-associated protein FlgK [Shewanella sediminis
           HAW-EB3]
 gi|157315575|gb|ABV34673.1| flagellar hook-associated protein FlgK [Shewanella sediminis
           HAW-EB3]
          Length = 457

 Score = 43.3 bits (100), Expect = 0.011,   Method: Composition-based stats.
 Identities = 9/38 (23%), Positives = 17/38 (44%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             VN+  E  ++    + Y AN + I  +  +  T L+
Sbjct: 418 SGVNMDEEAVNLIIYQQSYQANAKVISTADQLFQTILN 455



 Score = 33.7 bits (75), Expect = 8.0,   Method: Composition-based stats.
 Identities = 11/37 (29%), Positives = 17/37 (45%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGS 41
          ++  +I  SGL    A +   S N+ANA   G +   
Sbjct: 1  MSMLNIGMSGLNASMAALNTTSNNVANAMVPGYSRQQ 37


>gi|78358192|ref|YP_389641.1| flagellar hook-associated protein [Desulfovibrio desulfuricans
           subsp. desulfuricans str. G20]
 gi|78220597|gb|ABB39946.1| Flagellar hook-associated protein [Desulfovibrio desulfuricans
           subsp. desulfuricans str. G20]
          Length = 696

 Score = 43.3 bits (100), Expect = 0.011,   Method: Composition-based stats.
 Identities = 19/120 (15%), Positives = 41/120 (34%), Gaps = 8/120 (6%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             L +   +    L    + +Q    NIAN  T G +  +  +  KT    +      GV
Sbjct: 1   MTLNSLLSVGKDALFASQSAIQTTGNNIANVNTPGYSRQAVRFEAKTPIDWKPGQMGTGV 60

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
           +  ++    +TF+E+    H         ++  +  +    +         +N + I  +
Sbjct: 61  KAAEVFRYFNTFIEQEYHDHFATEQRWKAQHQMLQSVESLFN--------ESNSKGINAA 112



 Score = 42.9 bits (99), Expect = 0.014,   Method: Composition-based stats.
 Identities = 15/114 (13%), Positives = 33/114 (28%), Gaps = 10/114 (8%)

Query: 30  ANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK--------IGVDQSTFVEEFDPGH 81
           AN               K +             + +        +G D +      D   
Sbjct: 583 ANVGDNDTATAISGLATKKLDIPTSYEQGRNQSLSEYFNTISANVGSDTAQAKFGSDFYG 642

Query: 82  PVANASGIVKYP--NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            +A+     +     VN+  E + + +    Y A  + +  + +M+   L L +
Sbjct: 643 TLADDLSARQDSVAGVNLDEEMSSLVKFQHSYKAAAKLVTTADEMLQVLLGLKQ 696


>gi|325288804|ref|YP_004264985.1| fagellar hook-basal body protein [Syntrophobotulus glycolicus DSM
           8271]
 gi|324964205|gb|ADY54984.1| fagellar hook-basal body protein [Syntrophobotulus glycolicus DSM
           8271]
          Length = 256

 Score = 43.3 bits (100), Expect = 0.011,   Method: Composition-based stats.
 Identities = 10/84 (11%), Positives = 22/84 (26%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                  +  +G     +                      G+++  N +     ++M E 
Sbjct: 171 RFENPHGLQQAGDDIYLETDQSGPPLTGNPGTEGFGQIQGGMLERSNTDTAKAMSNMIEA 230

Query: 108 NRLYMANLQTIKQSHDMMTTTLDL 131
            R Y   +   K    M+   + L
Sbjct: 231 QRAYQIEIGITKDQDQMIAEAIAL 254


>gi|308050023|ref|YP_003913589.1| flagellar basal-body rod protein FlgF [Ferrimonas balearica DSM
           9799]
 gi|307632213|gb|ADN76515.1| flagellar basal-body rod protein FlgF [Ferrimonas balearica DSM
           9799]
          Length = 242

 Score = 43.3 bits (100), Expect = 0.011,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 24/59 (40%)

Query: 76  EFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
                  V  ASG ++  NV  + E       +R +   ++ +K +  +  +   LLRD
Sbjct: 183 IAPQDEAVQLASGFLEGSNVTAVEELLASMSLSRQFELQVKLMKSAETLAQSGNRLLRD 241


>gi|157164728|ref|YP_001466716.1| flagellar hook-associated protein FlgK [Campylobacter concisus
           13826]
 gi|157101468|gb|EAT97207.2| flagellar hook-associated protein FlgK [Campylobacter concisus
           13826]
          Length = 623

 Score = 43.3 bits (100), Expect = 0.011,   Method: Composition-based stats.
 Identities = 14/114 (12%), Positives = 28/114 (24%), Gaps = 4/114 (3%)

Query: 24  IISEN-IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTF---VEEFDP 79
           ++  N +AN            Y   T    +                 +     + + + 
Sbjct: 510 VVGNNEVANKMIQLQYQKQTFYSSGTALDRDETIEGYYRYFTTDMASDTEANNTIHDTNT 569

Query: 80  GHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
                          V+   E  ++      Y A  + I     M+ T L L +
Sbjct: 570 SLQRTAEEEFQSTSGVDTNEELTNLIRFQASYGAAAKIITTVDQMLDTLLSLKQ 623



 Score = 42.2 bits (97), Expect = 0.023,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 19/73 (26%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  +  S     SGL     ++     NI NA +   T                     G
Sbjct: 1  MANIFMSLGTGVSGLNAAQVQISTTGNNITNADSNYYTRQRVVQSASPAMNTVPGGVGTG 60

Query: 61 VRVKKIGVDQSTF 73
           +V  +      F
Sbjct: 61 TQVDTVTRLHDEF 73


>gi|317130723|ref|YP_004097005.1| flagellar hook-basal body protein [Bacillus cellulosilyticus DSM
           2522]
 gi|315475671|gb|ADU32274.1| flagellar hook-basal body protein [Bacillus cellulosilyticus DSM
           2522]
          Length = 274

 Score = 43.3 bits (100), Expect = 0.011,   Method: Composition-based stats.
 Identities = 14/123 (11%), Positives = 37/123 (30%), Gaps = 4/123 (3%)

Query: 15  LAVQSARMQIISENI---ANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQS 71
           L     R+ + +E+    +N                 +  +       G  + +   D +
Sbjct: 150 LDADGDRINVGNEDFIVRSNGEIIDANEQFIAQLDIALIADPDQLVKEGAGLLRYDGDNA 209

Query: 72  TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD- 130
                 +         G ++  NV+      +M    R + AN + ++     +   ++ 
Sbjct: 210 IESAIDNAEATFQLQQGFLERANVDAAQTMTEMMSALRTFEANQRVLQAYDRSLERAVND 269

Query: 131 LLR 133
           + R
Sbjct: 270 IGR 272


>gi|239828562|ref|YP_002951186.1| hypothetical protein GWCH70_3280 [Geobacillus sp. WCH70]
 gi|239808855|gb|ACS25920.1| protein of unknown function DUF1078 domain protein [Geobacillus sp.
           WCH70]
          Length = 283

 Score = 43.3 bits (100), Expect = 0.011,   Method: Composition-based stats.
 Identities = 14/69 (20%), Positives = 28/69 (40%), Gaps = 1/69 (1%)

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           +           +  + ++   G ++  NV++  E  DM  T R Y  N + I  S  M+
Sbjct: 215 VNETDVAVNMTGNLRNQISMTQGALEQSNVDLGAELTDMMITERSYQLNARAISLSDQML 274

Query: 126 TTTLDLLRD 134
              ++ +R 
Sbjct: 275 G-LINGIRS 282


>gi|301168512|emb|CBW28102.1| putative flagellar hook-associated protein 1 [Bacteriovorax marinus
           SJ]
          Length = 487

 Score = 43.3 bits (100), Expect = 0.011,   Method: Composition-based stats.
 Identities = 9/40 (22%), Positives = 21/40 (52%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            V++  E A+M +    Y A+ + ++ + +M  T + + R
Sbjct: 448 GVSIDEEAANMVKFQHAYEASAKIMQTADEMFKTVIGIKR 487



 Score = 40.2 bits (92), Expect = 0.093,   Method: Composition-based stats.
 Identities = 17/124 (13%), Positives = 39/124 (31%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +    +I  +GL      ++    NI+N  T G +         T   +       GVRV
Sbjct: 1   MSDLLNIGRTGLNASKKSLETTGHNISNVNTEGYSRQRVNQTTNTPITKGGTVHGTGVRV 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
           K +      F+ +        +     +   +  + +  +  +T+ L     +      +
Sbjct: 61  KSVTRINDDFINKRLEKAISNDRFFEQRAERMTQIEDIFNDLDTDGLNQVINKFFNSFRE 120

Query: 124 MMTT 127
           +   
Sbjct: 121 LANQ 124


>gi|308050018|ref|YP_003913584.1| flagellar hook-associated protein FlgK [Ferrimonas balearica DSM
           9799]
 gi|307632208|gb|ADN76510.1| flagellar hook-associated protein FlgK [Ferrimonas balearica DSM
           9799]
          Length = 457

 Score = 43.3 bits (100), Expect = 0.011,   Method: Composition-based stats.
 Identities = 8/39 (20%), Positives = 17/39 (43%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN+  E  ++    + Y AN + I  +  +  T + +
Sbjct: 418 SAVNLDEEGINIIVYQQAYQANAKVISTADQLFQTMMTM 456



 Score = 34.1 bits (76), Expect = 6.4,   Method: Composition-based stats.
 Identities = 18/104 (17%), Positives = 29/104 (27%), Gaps = 3/104 (2%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           +       SGL      +   S NIANA T G +        +   F   M    GV+V 
Sbjct: 1   MNMLGNGLSGLHAAQMHLATTSNNIANATTPGYSRQQLLVSARPGGF---MGAGSGVQVD 57

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +      ++                K   +    E    +  +
Sbjct: 58  GVRRVADEYLTAQIWRASTQAGFSTTKASYLGKTEEVFGSKGAS 101


>gi|148980301|ref|ZP_01815988.1| putative flagellar basal-body rod protein [Vibrionales bacterium
           SWAT-3]
 gi|145961320|gb|EDK26630.1| putative flagellar basal-body rod protein [Vibrionales bacterium
           SWAT-3]
          Length = 244

 Score = 43.3 bits (100), Expect = 0.011,   Method: Composition-based stats.
 Identities = 10/50 (20%), Positives = 21/50 (42%)

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
              SG ++  NV+ L E   +    R Y   ++ +  + ++      LL+
Sbjct: 194 QVRSGYLEASNVSSLEELVSIMSLTRQYEMQIEVMASADEIAQIGNKLLK 243


>gi|16799780|ref|NP_470048.1| flagellar hook protein FlgE [Listeria innocua Clip11262]
 gi|16802739|ref|NP_464224.1| flagellar hook protein FlgE [Listeria monocytogenes EGD-e]
 gi|47095263|ref|ZP_00232874.1| flagellar hook protein FlgE, putative [Listeria monocytogenes str.
           1/2a F6854]
 gi|116872086|ref|YP_848867.1| flagellar hook protein FlgE [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|224498779|ref|ZP_03667128.1| flagellar hook protein FlgE [Listeria monocytogenes Finland 1988]
 gi|224501998|ref|ZP_03670305.1| flagellar hook protein FlgE [Listeria monocytogenes FSL R2-561]
 gi|254829354|ref|ZP_05234041.1| flagellar hook protein FlgE [Listeria monocytogenes FSL N3-165]
 gi|254900067|ref|ZP_05259991.1| flagellar hook protein FlgE [Listeria monocytogenes J0161]
 gi|254911380|ref|ZP_05261392.1| conserved hypothetical protein [Listeria monocytogenes J2818]
 gi|254935707|ref|ZP_05267404.1| flagellar hook protein FlgE [Listeria monocytogenes F6900]
 gi|255027496|ref|ZP_05299482.1| flagellar hook protein FlgE [Listeria monocytogenes FSL J2-003]
 gi|16410086|emb|CAC98775.1| lmo0697 [Listeria monocytogenes EGD-e]
 gi|16413157|emb|CAC95937.1| lin0705 [Listeria innocua Clip11262]
 gi|47016334|gb|EAL07256.1| flagellar hook protein FlgE, putative [Listeria monocytogenes str.
           1/2a F6854]
 gi|116740964|emb|CAK20084.1| flagellar hook protein FlgE, putative [Listeria welshimeri serovar
           6b str. SLCC5334]
 gi|258601767|gb|EEW15092.1| flagellar hook protein FlgE [Listeria monocytogenes FSL N3-165]
 gi|258608290|gb|EEW20898.1| flagellar hook protein FlgE [Listeria monocytogenes F6900]
 gi|293589317|gb|EFF97651.1| conserved hypothetical protein [Listeria monocytogenes J2818]
 gi|313620066|gb|EFR91579.1| flagellar hook protein FlgE [Listeria innocua FSL S4-378]
          Length = 411

 Score = 43.3 bits (100), Expect = 0.011,   Method: Composition-based stats.
 Identities = 15/105 (14%), Positives = 35/105 (33%)

Query: 29  IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASG 88
           IA + + G           T S E+ +   G                          +  
Sbjct: 307 IAVSYSDGTVIPVAQLAVATFSNEDGLVKMGNGEYVPGLSSGDAVYGVAGQNGAGGISGS 366

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NV++  E  ++      +  N + I+ + D+M   ++L++
Sbjct: 367 SLEGSNVDLSREFVNLMTYQSGFQGNTKVIRVADDVMKQIVNLIQ 411



 Score = 38.7 bits (88), Expect = 0.30,   Method: Composition-based stats.
 Identities = 16/93 (17%), Positives = 36/93 (38%), Gaps = 7/93 (7%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +  + + A SG+      + + S NIANA TTG       Y+++++ F ++++ +    V
Sbjct: 1  MNQTMYTAISGMNAFQQALSVTSNNIANANTTG-------YKKQSVVFNDLLYQNTMGSV 53

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVN 96
                 +  +         A  +        +
Sbjct: 54 AGGLYAGTNPMSFGSGSKIGAILTDYTAGSPTS 86


>gi|290893994|ref|ZP_06556969.1| flagellar hook protein FlgE [Listeria monocytogenes FSL J2-071]
 gi|290556440|gb|EFD89979.1| flagellar hook protein FlgE [Listeria monocytogenes FSL J2-071]
          Length = 411

 Score = 43.3 bits (100), Expect = 0.012,   Method: Composition-based stats.
 Identities = 15/105 (14%), Positives = 35/105 (33%)

Query: 29  IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASG 88
           IA + + G           T S E+ +   G                          +  
Sbjct: 307 IAVSYSDGTVIPVAQLAVATFSNEDGLVKMGNGEYVPGLSSGDAVYGVAGQNGAGGISGS 366

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NV++  E  ++      +  N + I+ + D+M   ++L++
Sbjct: 367 SLEGSNVDLSREFVNLMTYQSGFQGNTKVIRVADDVMKQIVNLIQ 411



 Score = 38.3 bits (87), Expect = 0.34,   Method: Composition-based stats.
 Identities = 16/93 (17%), Positives = 35/93 (37%), Gaps = 7/93 (7%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +  + + A SG+      + + S NIANA TTG       Y+++++ F ++++ +    V
Sbjct: 1  MNQTMYTAISGMNAFQQALSVTSNNIANANTTG-------YKKQSVVFNDLLYQNTMGSV 53

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVN 96
                 +  +         A  +         
Sbjct: 54 AGGLYAGTNPMSFGSGSKIGAILTDYTAGSPTA 86


>gi|254830312|ref|ZP_05234967.1| flagellar hook protein FlgE [Listeria monocytogenes 10403S]
          Length = 411

 Score = 43.3 bits (100), Expect = 0.012,   Method: Composition-based stats.
 Identities = 15/105 (14%), Positives = 35/105 (33%)

Query: 29  IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASG 88
           IA + + G           T S E+ +   G                          +  
Sbjct: 307 IAVSYSDGTVIPVAQLAVATFSNEDGLVKMGNGEYVPGLSSGDAVYGVAGQNGAGGISGS 366

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NV++  E  ++      +  N + I+ + D+M   ++L++
Sbjct: 367 SLEGSNVDLSREFVNLMTYQSGFQGNTKVIRVADDVMKQIVNLIQ 411



 Score = 38.7 bits (88), Expect = 0.31,   Method: Composition-based stats.
 Identities = 16/93 (17%), Positives = 36/93 (38%), Gaps = 7/93 (7%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +  + + A SG+      + + S NIANA TTG       Y+++++ F ++++ +    V
Sbjct: 1  MNQTMYTAISGMNAFQQALSVTSNNIANANTTG-------YKKQSVVFNDLLYQNTMGSV 53

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVN 96
                 +  +         A  +        +
Sbjct: 54 AGGLYAGTNPMSFGSGSKIGAILTDYTAGSPTS 86


>gi|46906948|ref|YP_013337.1| flagellar hook protein FlgE [Listeria monocytogenes serotype 4b
           str. F2365]
 gi|47091659|ref|ZP_00229455.1| flagellar hook protein FlgE, putative [Listeria monocytogenes str.
           4b H7858]
 gi|217965205|ref|YP_002350883.1| flagellar hook protein [Listeria monocytogenes HCC23]
 gi|226223328|ref|YP_002757435.1| flagellar hook protein FlgE [Listeria monocytogenes Clip81459]
 gi|254824023|ref|ZP_05229024.1| flagellar hook protein FlgE [Listeria monocytogenes FSL J1-194]
 gi|254853099|ref|ZP_05242447.1| flagellar hook protein FlgE [Listeria monocytogenes FSL R2-503]
 gi|254932023|ref|ZP_05265382.1| flagellar hook protein FlgE [Listeria monocytogenes HPB2262]
 gi|300764509|ref|ZP_07074502.1| flagellar hook protein FlgE [Listeria monocytogenes FSL N1-017]
 gi|46880214|gb|AAT03514.1| putative flagellar hook protein FlgE [Listeria monocytogenes
           serotype 4b str. F2365]
 gi|47019978|gb|EAL10715.1| flagellar hook protein FlgE, putative [Listeria monocytogenes str.
           4b H7858]
 gi|217334475|gb|ACK40269.1| flagellar hook protein [Listeria monocytogenes HCC23]
 gi|225875790|emb|CAS04493.1| Putative flagellar hook protein FlgE [Listeria monocytogenes
           serotype 4b str. CLIP 80459]
 gi|258606448|gb|EEW19056.1| flagellar hook protein FlgE [Listeria monocytogenes FSL R2-503]
 gi|293583575|gb|EFF95607.1| flagellar hook protein FlgE [Listeria monocytogenes HPB2262]
 gi|293593251|gb|EFG01012.1| flagellar hook protein FlgE [Listeria monocytogenes FSL J1-194]
 gi|300514863|gb|EFK41917.1| flagellar hook protein FlgE [Listeria monocytogenes FSL N1-017]
 gi|307570236|emb|CAR83415.1| flagellar hook protein [Listeria monocytogenes L99]
 gi|332311122|gb|EGJ24217.1| Flagellar hook protein FlgE [Listeria monocytogenes str. Scott A]
          Length = 411

 Score = 43.3 bits (100), Expect = 0.012,   Method: Composition-based stats.
 Identities = 15/105 (14%), Positives = 35/105 (33%)

Query: 29  IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASG 88
           IA + + G           T S E+ +   G                          +  
Sbjct: 307 IAVSYSDGTVIPVAQLAVATFSNEDGLVKMGNGEYVPGLSSGDAVYGVAGQNGAGGISGS 366

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NV++  E  ++      +  N + I+ + D+M   ++L++
Sbjct: 367 SLEGSNVDLSREFVNLMTYQSGFQGNTKVIRVADDVMKQIVNLIQ 411



 Score = 38.3 bits (87), Expect = 0.34,   Method: Composition-based stats.
 Identities = 16/93 (17%), Positives = 35/93 (37%), Gaps = 7/93 (7%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +  + + A SG+      + + S NIANA TTG       Y+++++ F ++++ +    V
Sbjct: 1  MNQTMYTAISGMNAFQQALSVTSNNIANANTTG-------YKKQSVVFNDLLYQNTMGSV 53

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVN 96
                 +  +         A  +         
Sbjct: 54 AGGLYAGTNPMSFGSGSKIGAILTDYTAGSPTA 86


>gi|167568430|ref|ZP_02361304.1| flagellar hook-associated protein FlgK [Burkholderia oklahomensis
           C6786]
          Length = 668

 Score = 43.3 bits (100), Expect = 0.012,   Method: Composition-based stats.
 Identities = 21/129 (16%), Positives = 40/129 (31%), Gaps = 2/129 (1%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           +    ++ SG      +  I +    N              +   +    + G+    V 
Sbjct: 538 MNDVSVSLSGTPADGDQFTIGANKGTNDGRNALALSQLVNSKTMNNGTTTLTGAYAGYVN 597

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYP--NVNVLVETADMRETNRLYMANLQTIKQSH 122
            IG   S           +       +     VN   E A++ +  +LY AN + I+ + 
Sbjct: 598 AIGNAASQLKASSTAQTALVGQITAQQQSVSGVNQNEEAANLMQYQQLYQANAKVIQTAD 657

Query: 123 DMMTTTLDL 131
            +  T L L
Sbjct: 658 SLFKTVLGL 666


>gi|119947176|ref|YP_944856.1| flagellar basal-body rod protein FlgF [Psychromonas ingrahamii 37]
 gi|119865780|gb|ABM05257.1| flagellar basal-body rod protein FlgF [Psychromonas ingrahamii 37]
          Length = 243

 Score = 43.3 bits (100), Expect = 0.012,   Method: Composition-based stats.
 Identities = 10/50 (20%), Positives = 21/50 (42%)

Query: 82  PVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            V   S  ++  NV+V+ E   +    R Y   ++ +K +  ++     L
Sbjct: 189 DVEMTSEYLESANVSVISEMIGVMTATRQYEMQVKMMKAADQLIAAGNKL 238


>gi|288554367|ref|YP_003426302.1| flagellar hook-basal body protein [Bacillus pseudofirmus OF4]
 gi|288545527|gb|ADC49410.1| flagellar hook-basal body protein [Bacillus pseudofirmus OF4]
          Length = 281

 Score = 43.3 bits (100), Expect = 0.012,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 24/58 (41%)

Query: 76  EFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           E  PG         ++  NVN+  E  ++ +T R Y  N + +  + +M      + R
Sbjct: 224 EQVPGDEGRLMQNALEQSNVNIAQEMNELLQTQRHYQFNARALSMADEMNGLINGIRR 281


>gi|240145382|ref|ZP_04743983.1| flagellar hook-associated protein FlgK [Roseburia intestinalis
          L1-82]
 gi|257202503|gb|EEV00788.1| flagellar hook-associated protein FlgK [Roseburia intestinalis
          L1-82]
          Length = 613

 Score = 43.3 bits (100), Expect = 0.012,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 23/65 (35%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M        IA+SGL+     +   + NI+N +T G +                 +GS G
Sbjct: 1  MPSTFFGLTIASSGLSAYQVALNTSANNISNVQTKGYSKQQANRVASESIRAYAKYGSMG 60

Query: 61 VRVKK 65
            V  
Sbjct: 61 TGVTT 65


>gi|170751912|ref|YP_001758172.1| flagellar hook-associated protein FlgK [Methylobacterium
           radiotolerans JCM 2831]
 gi|170658434|gb|ACB27489.1| flagellar hook-associated protein FlgK [Methylobacterium
           radiotolerans JCM 2831]
          Length = 627

 Score = 43.3 bits (100), Expect = 0.012,   Method: Composition-based stats.
 Identities = 21/121 (17%), Positives = 40/121 (33%), Gaps = 5/121 (4%)

Query: 11  ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQ 70
           + SG   Q     + +     + ++G    S PY    I F + +  + G          
Sbjct: 512 SASGARAQKLFTALTATPQTFSSSSGIGGVSAPYSTSVIGFAQDIVSTQGANASNASALD 571

Query: 71  STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           +               S       VN+  E +++      Y AN + +  + DM+T  L 
Sbjct: 572 A-----TQQTALSTAQSRFSAGAGVNIDQEMSNLIALQTAYGANARVLTAARDMLTQLLQ 626

Query: 131 L 131
           +
Sbjct: 627 I 627


>gi|312127297|ref|YP_003992171.1| flagellar hook-associated protein flgk [Caldicellulosiruptor
           hydrothermalis 108]
 gi|311777316|gb|ADQ06802.1| flagellar hook-associated protein FlgK [Caldicellulosiruptor
           hydrothermalis 108]
          Length = 525

 Score = 43.3 bits (100), Expect = 0.012,   Method: Composition-based stats.
 Identities = 5/38 (13%), Positives = 17/38 (44%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             V++  E  ++ +    + A+ + I    +M+   ++
Sbjct: 481 SGVSIDEEMTNLIKYQHGFQASARMINAFDEMLDVLVN 518


>gi|169826733|ref|YP_001696891.1| flagellar hook-associated protein FlgK [Lysinibacillus sphaericus
           C3-41]
 gi|168991221|gb|ACA38761.1| Flagellar hook-associated protein 1 (HAP1) [Lysinibacillus
           sphaericus C3-41]
          Length = 530

 Score = 43.3 bits (100), Expect = 0.012,   Method: Composition-based stats.
 Identities = 18/114 (15%), Positives = 37/114 (32%), Gaps = 10/114 (8%)

Query: 30  ANARTTGDTPGSDPY-------RRKTISFEEVMHGSGGVRVKKIGVDQSTFVE--EFDPG 80
           A+A  T +  G + Y       +         +       V K+GVD    +        
Sbjct: 414 ASANPTEEGNGKNAYELANMQHKLYADIDNASLQSFYQAIVGKVGVDGEEALRLAASSES 473

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD-LLR 133
             +  +        V++  E  +M    + Y AN + I    + +   ++ + R
Sbjct: 474 QLLMVSKSRDSVSAVSLDEEMTNMITFQQAYNANARMITVVDETLDKIINGMGR 527



 Score = 36.0 bits (81), Expect = 1.8,   Method: Composition-based stats.
 Identities = 20/112 (17%), Positives = 33/112 (29%), Gaps = 10/112 (8%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-- 58
           M         +  GL VQ   +     NI+NA T G +      +         ++    
Sbjct: 1   MRSTFMGLEASKRGLFVQQTALYTTGHNISNANTLGYSRQRVNMQATPGFPTAGLNQPTY 60

Query: 59  -----GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
                 GV    I   +S F++         N  G       N + +  D+ 
Sbjct: 61  PGHLGTGVEAGSIQRIRSEFIDR--QYRQETNKLGY-WESRTNAIAQMEDVM 109


>gi|62179695|ref|YP_216112.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|62127328|gb|AAX65031.1| flagellar biosynthesis, cell-proximal portion of basal-body rod
           [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
          Length = 251

 Score = 43.3 bits (100), Expect = 0.012,   Method: Composition-based stats.
 Identities = 14/102 (13%), Positives = 29/102 (28%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           N     +T       +   +    +  S     +     Q+           +   SG++
Sbjct: 147 NPGDPPNTVAPVGRLKLVKAEGNEVQRSDDGLFRLTTEAQAERGAVLAADPSIRIMSGVL 206

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NV  +    DM    R +   ++ I    +       LL
Sbjct: 207 EGSNVKPVEAMTDMIANARRFEMQMKVITSVDENEGRANQLL 248


>gi|56413835|ref|YP_150910.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|197362758|ref|YP_002142395.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
 gi|56128092|gb|AAV77598.1| putative flagellar basal-body rod protein FlgF (proximal rod
           protein) [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. ATCC 9150]
 gi|197094235|emb|CAR59740.1| putative flagellar basal-body rod protein FlgF (proximal rod
           protein) [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. AKU_12601]
          Length = 251

 Score = 43.3 bits (100), Expect = 0.012,   Method: Composition-based stats.
 Identities = 14/102 (13%), Positives = 29/102 (28%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           N     +T       +   +    +  S     +     Q+           +   SG++
Sbjct: 147 NPGDPPNTVAPVGRLKLVKAEGNEVQRSDDGLFRLTAEAQAERGAVLAADPSIRIMSGVL 206

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NV  +    DM    R +   ++ I    +       LL
Sbjct: 207 EGSNVKPVEAMTDMIANARRFEMQMKVITSVDENEGRANQLL 248


>gi|291534845|emb|CBL07957.1| flagellar hook-associated protein FlgK [Roseburia intestinalis
          M50/1]
          Length = 613

 Score = 43.3 bits (100), Expect = 0.012,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 23/65 (35%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M        IA+SGL+     +   + NI+N +T G +                 +GS G
Sbjct: 1  MPSTFFGLTIASSGLSAYQVALNTSANNISNVQTKGYSKQQANRVASESIRAYAKYGSMG 60

Query: 61 VRVKK 65
            V  
Sbjct: 61 TGVTT 65


>gi|284801027|ref|YP_003412892.1| flagellar hook protein FlgE [Listeria monocytogenes 08-5578]
 gi|284994169|ref|YP_003415937.1| flagellar hook protein FlgE [Listeria monocytogenes 08-5923]
 gi|284056589|gb|ADB67530.1| flagellar hook protein FlgE [Listeria monocytogenes 08-5578]
 gi|284059636|gb|ADB70575.1| flagellar hook protein FlgE [Listeria monocytogenes 08-5923]
          Length = 411

 Score = 43.3 bits (100), Expect = 0.012,   Method: Composition-based stats.
 Identities = 15/105 (14%), Positives = 35/105 (33%)

Query: 29  IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASG 88
           IA + + G           T S E+ +   G                          +  
Sbjct: 307 IAVSYSDGTVIPVAQLAVATFSNEDGLVKMGNGEYVPGLSSGDAVYGVAGQNGAGGISGS 366

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NV++  E  ++      +  N + I+ + D+M   ++L++
Sbjct: 367 SLEGSNVDLSREFVNLMTYQSGFQGNTKVIRVADDVMKQIVNLIQ 411



 Score = 38.3 bits (87), Expect = 0.32,   Method: Composition-based stats.
 Identities = 16/93 (17%), Positives = 36/93 (38%), Gaps = 7/93 (7%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +  + + A SG+      + + S NIANA TTG       Y+++++ F ++++ +    V
Sbjct: 1  MNQTMYTAISGMNAFQQALSVTSNNIANANTTG-------YKKQSVVFNDLLYQNTMGSV 53

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVN 96
                 +  +         A  +        +
Sbjct: 54 AGGLYAGTNPMSFGSGSKIGAILTDYTAGSPTS 86


>gi|254499120|ref|ZP_05111810.1| flagellar basal body rod protein [Legionella drancourtii LLAP12]
 gi|254351659|gb|EET10504.1| flagellar basal body rod protein [Legionella drancourtii LLAP12]
          Length = 258

 Score = 43.3 bits (100), Expect = 0.012,   Method: Composition-based stats.
 Identities = 10/84 (11%), Positives = 28/84 (33%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                E ++  G              ++          A   V+  NV+++     +   
Sbjct: 173 KFINPETLNPVGSGTYTLTDESSEPLIDNPGSSGLGTLAQYQVEGSNVDMVSSLMQLTMA 232

Query: 108 NRLYMANLQTIKQSHDMMTTTLDL 131
            R+Y  N + ++ + ++   T ++
Sbjct: 233 QRVYQLNAKAVQIADELEKLTNEI 256



 Score = 34.8 bits (78), Expect = 3.8,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 17/41 (41%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  +  IA SGL  +   +  I+ ++AN  T         +
Sbjct: 1  MSNALAIAASGLKAEEYHIDRIANDLANLNTANYKATKLTF 41


>gi|255521910|ref|ZP_05389147.1| flagellar hook protein FlgE [Listeria monocytogenes FSL J1-175]
          Length = 411

 Score = 43.3 bits (100), Expect = 0.012,   Method: Composition-based stats.
 Identities = 15/105 (14%), Positives = 35/105 (33%)

Query: 29  IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASG 88
           IA + + G           T S E+ +   G                          +  
Sbjct: 307 IAVSYSDGTVIPVAQLAVATFSNEDGLVKMGNGEYVPGLSSGDAVYGVAGQNGAGGISGS 366

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NV++  E  ++      +  N + I+ + D+M   ++L++
Sbjct: 367 SLEGSNVDLSREFVNLMTYQSGFQGNTKVIRVADDVMKQIVNLIQ 411



 Score = 38.3 bits (87), Expect = 0.35,   Method: Composition-based stats.
 Identities = 16/93 (17%), Positives = 35/93 (37%), Gaps = 7/93 (7%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +  + + A SG+      + + S NIANA TTG       Y+++++ F ++++ +    V
Sbjct: 1  MNQTMYTAISGMNAFQQALSVTSNNIANANTTG-------YKKQSVVFNDLLYQNTMGSV 53

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVN 96
                 +  +         A  +         
Sbjct: 54 AGGLYAGTNPMSFGSGSKIGAILTDYTAGSPTA 86


>gi|188590007|ref|YP_001920227.1| flagellar basal body rod protein FlgG [Clostridium botulinum E3
           str. Alaska E43]
 gi|188500288|gb|ACD53424.1| flagellar hook-basal body complex protein [Clostridium botulinum E3
           str. Alaska E43]
          Length = 257

 Score = 43.3 bits (100), Expect = 0.012,   Method: Composition-based stats.
 Identities = 9/54 (16%), Positives = 19/54 (35%)

Query: 77  FDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
                 V    G+++  NVN   E   + E  R +  N + +    + +    +
Sbjct: 198 PIYNAVVNVRQGVLETSNVNPTEELVKLMEIKRQFETNQKFVSMQDETVQKAAN 251


>gi|296134284|ref|YP_003641531.1| flagellar hook-associated protein FlgK [Thermincola sp. JR]
 gi|296032862|gb|ADG83630.1| flagellar hook-associated protein FlgK [Thermincola potens JR]
          Length = 479

 Score = 43.3 bits (100), Expect = 0.012,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 23/78 (29%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M       +I    L  Q   + + + NIANA T G +         T      ++   G
Sbjct: 1  MRSTFFGLNIGRQALQAQQRALDVTAHNIANANTEGFSRQRAVMATTTPFAYPSVNRPIG 60

Query: 61 VRVKKIGVDQSTFVEEFD 78
                GV         D
Sbjct: 61 AGQIGTGVMVEEVKRMRD 78



 Score = 39.5 bits (90), Expect = 0.15,   Method: Composition-based stats.
 Identities = 9/40 (22%), Positives = 19/40 (47%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           +   V++  E  +M +    Y A  +TI    +M+ T ++
Sbjct: 433 EVSGVSLDEEMTNMIKFQHAYNAAARTITAMDEMLDTIVN 472


>gi|251779966|ref|ZP_04822886.1| flagellar hook-basal body complex protein [Clostridium botulinum E1
           str. 'BoNT E Beluga']
 gi|243084281|gb|EES50171.1| flagellar hook-basal body complex protein [Clostridium botulinum E1
           str. 'BoNT E Beluga']
          Length = 257

 Score = 43.3 bits (100), Expect = 0.012,   Method: Composition-based stats.
 Identities = 9/54 (16%), Positives = 19/54 (35%)

Query: 77  FDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
                 V    G+++  NVN   E   + E  R +  N + +    + +    +
Sbjct: 198 PIYNAVVNVRQGVLETSNVNPTEELVKLMEIKRQFETNQKFVSMQDETVQKAAN 251


>gi|168822621|ref|ZP_02834621.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|204930894|ref|ZP_03221767.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
 gi|204320353|gb|EDZ05557.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
 gi|205340993|gb|EDZ27757.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|320086382|emb|CBY96155.1| Flagellar basal-body rod protein flgF putative proximal rod protein
           [Salmonella enterica subsp. enterica serovar Weltevreden
           str. 2007-60-3289-1]
          Length = 251

 Score = 43.3 bits (100), Expect = 0.012,   Method: Composition-based stats.
 Identities = 14/102 (13%), Positives = 29/102 (28%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           N     +T       +   +    +  S     +     Q+           +   SG++
Sbjct: 147 NPGDPPNTVAPVGRLKLVKAEGNEVQRSDDGLFRLTAEAQAERGAVLAADPSIRIMSGVL 206

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NV  +    DM    R +   ++ I    +       LL
Sbjct: 207 EGSNVKPVEAMTDMIANARRFEMQMKVITSVDENEGRANQLL 248


>gi|188991640|ref|YP_001903650.1| flagellar basal body rod protein FlgF [Xanthomonas campestris pv.
           campestris str. B100]
 gi|167733400|emb|CAP51601.1| Flagellar basal-body rod protein flgF [Xanthomonas campestris pv.
           campestris]
          Length = 251

 Score = 43.3 bits (100), Expect = 0.012,   Method: Composition-based stats.
 Identities = 17/112 (15%), Positives = 38/112 (33%)

Query: 22  MQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGH 81
           M+I S+   +    G+ P +     K    +             +    +   + F    
Sbjct: 137 MEIGSDGSISIIPQGEGPPTMAIVGKMKVVDAPADRLTRRPDGLMRNTSTDPAQAFAVAT 196

Query: 82  PVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
                SG+++  NV+      +M +  R +   ++ IK   D   +   ++R
Sbjct: 197 GKTVNSGMLEGSNVDAAGALVEMIQLQRQFEMQVKIIKNGDDNAQSANSMMR 248


>gi|16764534|ref|NP_460149.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|161614599|ref|YP_001588564.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|167553034|ref|ZP_02346784.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|167994042|ref|ZP_02575134.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|168234104|ref|ZP_02659162.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|168237260|ref|ZP_02662318.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
 gi|168244777|ref|ZP_02669709.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|168264029|ref|ZP_02686002.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|168467130|ref|ZP_02700972.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|194446055|ref|YP_002040432.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194449678|ref|YP_002045177.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|194470312|ref|ZP_03076296.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|194736339|ref|YP_002114177.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|197265515|ref|ZP_03165589.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|198245943|ref|YP_002215959.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|200390876|ref|ZP_03217487.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|205353084|ref|YP_002226885.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|207857314|ref|YP_002243965.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|224584318|ref|YP_002638116.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|238911002|ref|ZP_04654839.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Tennessee str. CDC07-0191]
 gi|120298|sp|P16323|FLGF_SALTY RecName: Full=Flagellar basal-body rod protein flgF; AltName:
           Full=Putative proximal rod protein
 gi|47676|emb|CAA36313.1| flgF protein product (AA 1-251) [Salmonella enterica subsp.
           enterica serovar Typhimurium]
 gi|16419695|gb|AAL20108.1| flagellar biosynthesis protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|161363963|gb|ABX67731.1| hypothetical protein SPAB_02349 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194404718|gb|ACF64940.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194407982|gb|ACF68201.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|194456676|gb|EDX45515.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|194711841|gb|ACF91062.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|195630350|gb|EDX48976.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|197243770|gb|EDY26390.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|197289883|gb|EDY29244.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
 gi|197940459|gb|ACH77792.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|199603321|gb|EDZ01867.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|205272865|emb|CAR37794.1| putative flagellar basal-body rod protein FlgF (proximal rod
           protein) [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 287/91]
 gi|205322401|gb|EDZ10240.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|205328032|gb|EDZ14796.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|205331944|gb|EDZ18708.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|205336412|gb|EDZ23176.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|205347326|gb|EDZ33957.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|206709117|emb|CAR33450.1| putative flagellar basal-body rod protein FlgF (proximal rod
           protein) [Salmonella enterica subsp. enterica serovar
           Enteritidis str. P125109]
 gi|224468845|gb|ACN46675.1| putative flagellar basal-body rod protein FlgF (proximal rod
           protein) [Salmonella enterica subsp. enterica serovar
           Paratyphi C strain RKS4594]
 gi|261246389|emb|CBG24198.1| putative flagellar basal-body rod protein FlgF (proximal rod
           protein) [Salmonella enterica subsp. enterica serovar
           Typhimurium str. D23580]
 gi|267992952|gb|ACY87837.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 14028S]
 gi|301157719|emb|CBW17211.1| putative flagellar basal-body rod protein FlgF (proximal rod
           protein) [Salmonella enterica subsp. enterica serovar
           Typhimurium str. SL1344]
 gi|312912165|dbj|BAJ36139.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Typhimurium str. T000240]
 gi|321223796|gb|EFX48859.1| Flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Typhimurium str. TN061786]
 gi|322616548|gb|EFY13457.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315996572]
 gi|322620511|gb|EFY17375.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-1]
 gi|322622505|gb|EFY19350.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-3]
 gi|322629656|gb|EFY26431.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-4]
 gi|322632624|gb|EFY29370.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-1]
 gi|322636881|gb|EFY33584.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-2]
 gi|322641581|gb|EFY38219.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. 531954]
 gi|322644071|gb|EFY40617.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. NC_MB110209-0054]
 gi|322650029|gb|EFY46447.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. OH_2009072675]
 gi|322653954|gb|EFY50277.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. CASC_09SCPH15965]
 gi|322658486|gb|EFY54748.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. 19N]
 gi|322663344|gb|EFY59546.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. 81038-01]
 gi|322670078|gb|EFY66218.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. MD_MDA09249507]
 gi|322674858|gb|EFY70949.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. 414877]
 gi|322676672|gb|EFY72739.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. 366867]
 gi|322682594|gb|EFY78613.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. 413180]
 gi|322686653|gb|EFY82632.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. 446600]
 gi|322714165|gb|EFZ05736.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. A50]
 gi|323129448|gb|ADX16878.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 4/74]
 gi|323195767|gb|EFZ80943.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609458-1]
 gi|323198341|gb|EFZ83445.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556150-1]
 gi|323209178|gb|EFZ94115.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. 507440-20]
 gi|323209682|gb|EFZ94611.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556152]
 gi|323217862|gb|EGA02577.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB101509-0077]
 gi|323222150|gb|EGA06534.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB102109-0047]
 gi|323224922|gb|EGA09180.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB110209-0055]
 gi|323229664|gb|EGA13787.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB111609-0052]
 gi|323232889|gb|EGA16985.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009083312]
 gi|323240624|gb|EGA24666.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009085258]
 gi|323242938|gb|EGA26959.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315731156]
 gi|323250255|gb|EGA34144.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2009159199]
 gi|323252630|gb|EGA36468.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008282]
 gi|323258842|gb|EGA42495.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008283]
 gi|323261031|gb|EGA44624.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008284]
 gi|323266940|gb|EGA50425.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008285]
 gi|323269981|gb|EGA53430.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008287]
 gi|326623707|gb|EGE30052.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Dublin str. 3246]
 gi|326628164|gb|EGE34507.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 9]
 gi|332988069|gb|AEF07052.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Typhimurium str. UK-1]
          Length = 251

 Score = 43.3 bits (100), Expect = 0.012,   Method: Composition-based stats.
 Identities = 14/102 (13%), Positives = 29/102 (28%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           N     +T       +   +    +  S     +     Q+           +   SG++
Sbjct: 147 NPGDPPNTVAPVGRLKLVKAEGNEVQRSDDGLFRLTAEAQAERGAVLAADPSIRIMSGVL 206

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NV  +    DM    R +   ++ I    +       LL
Sbjct: 207 EGSNVKPVEAMTDMIANARRFEMQMKVITSVDENEGRANQLL 248


>gi|325921025|ref|ZP_08182907.1| flagellar basal-body rod protein FlgF, proteobacterial [Xanthomonas
           gardneri ATCC 19865]
 gi|325548507|gb|EGD19479.1| flagellar basal-body rod protein FlgF, proteobacterial [Xanthomonas
           gardneri ATCC 19865]
          Length = 251

 Score = 43.3 bits (100), Expect = 0.013,   Method: Composition-based stats.
 Identities = 17/112 (15%), Positives = 38/112 (33%)

Query: 22  MQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGH 81
           M+I S+   +    G+ P +     K    +             +    +   + F    
Sbjct: 137 MEIGSDGSISIIPQGEGPQTMAIVGKMKVVDAPADRLTRRPDGLMRNTSTDPAQAFQIAT 196

Query: 82  PVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
                SG+++  NV+      +M +  R +   ++ IK   D   +   ++R
Sbjct: 197 GKTINSGMLEGSNVDAAGALVEMIQLQRQFEMQVKIIKNGDDNAQSANSMMR 248


>gi|94265700|ref|ZP_01289439.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
 gi|93453786|gb|EAT04158.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
          Length = 875

 Score = 42.9 bits (99), Expect = 0.013,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 38/124 (30%), Gaps = 7/124 (5%)

Query: 15  LAVQSARMQ--IISENIANA---RTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVD 69
           LA    R    + + +  NA                 +T S     +   G    K    
Sbjct: 754 LAAGQVRDDGQVYAGDNTNALEISNLQHKDNIKFEGGRTNSLNGFYNSLIGDIGNKGRTI 813

Query: 70  QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
                      + +      V    V++  E A++ +    Y A  + I  S +M+ T L
Sbjct: 814 GRNLEFNELVLNQMNEMRDAV--SGVSLDEEMANLIKFQHAYTAAARMISMSDEMLVTLL 871

Query: 130 DLLR 133
           D +R
Sbjct: 872 DTVR 875



 Score = 35.2 bits (79), Expect = 3.0,   Method: Composition-based stats.
 Identities = 18/99 (18%), Positives = 30/99 (30%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  +    ++A   L    + +Q+   N+AN  T G T         T          GG
Sbjct: 1  MSGITHVLNLAKQALLTHQSSIQVAGHNVANVDTPGYTRQKINIEANTAFPSAAGIMGGG 60

Query: 61 VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
          V    I      F+ E          +   +   + V+ 
Sbjct: 61 VLADGIARQYDQFMVERIAKQSSLMGNLEAQQQALRVVE 99


>gi|319790356|ref|YP_004151989.1| flagellar hook-associated protein FlgK [Thermovibrio ammonificans
           HB-1]
 gi|317114858|gb|ADU97348.1| flagellar hook-associated protein FlgK [Thermovibrio ammonificans
           HB-1]
          Length = 449

 Score = 42.9 bits (99), Expect = 0.013,   Method: Composition-based stats.
 Identities = 8/41 (19%), Positives = 19/41 (46%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +   VN   E  ++    R Y A  + +  + +++ T L++
Sbjct: 407 ELSGVNTDEELVNLTRYQRAYQAAARVVTVTDELLQTILNM 447


>gi|312962294|ref|ZP_07776785.1| flagellar basal-body rod protein FlgG [Pseudomonas fluorescens
          WH6]
 gi|311283221|gb|EFQ61811.1| flagellar basal-body rod protein FlgG [Pseudomonas fluorescens
          WH6]
          Length = 207

 Score = 42.9 bits (99), Expect = 0.013,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 22/42 (52%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ +  +A +GL+ Q   +  IS N+AN  TTG       ++
Sbjct: 1  MLPALWVAKTGLSAQDTNLTTISNNLANVSTTGFKRDRAEFQ 42


>gi|300311353|ref|YP_003775445.1| flagellar basal body rod protein FlgF [Herbaspirillum seropedicae
           SmR1]
 gi|300074138|gb|ADJ63537.1| flagellar basal body rod FlgF protein [Herbaspirillum seropedicae
           SmR1]
          Length = 245

 Score = 42.9 bits (99), Expect = 0.013,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 26/55 (47%)

Query: 78  DPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
            P   V  ASG ++  NVNV+    +M   +R +  N++ I+ +    T    +L
Sbjct: 188 QPDANVRLASGALEGSNVNVVEAMVNMINLSRQFEMNMKMIQTAESDATKATSIL 242


>gi|197251378|ref|YP_002146865.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|197215081|gb|ACH52478.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
          Length = 251

 Score = 42.9 bits (99), Expect = 0.013,   Method: Composition-based stats.
 Identities = 14/102 (13%), Positives = 29/102 (28%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           N     +T       +   +    +  S     +     Q+           +   SG++
Sbjct: 147 NPGDPPNTVAPVGRLKLVKAEGNEVQRSDDGLFRLTAEAQAERGAVLAANPSIRIMSGVL 206

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NV  +    DM    R +   ++ I    +       LL
Sbjct: 207 EGSNVKPVEAMTDMIANARRFEMQMKVITSVDENEGRANQLL 248


>gi|86157770|ref|YP_464555.1| flagellar hook-associated protein [Anaeromyxobacter dehalogenans
           2CP-C]
 gi|85774281|gb|ABC81118.1| flagellar hook-associated protein [Anaeromyxobacter dehalogenans
           2CP-C]
          Length = 469

 Score = 42.9 bits (99), Expect = 0.013,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 18/40 (45%)

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
              V+V  E  +M    R Y A  + I+ + +M  T L L
Sbjct: 429 ASGVSVDEELLEMERAQRAYEAISKVIQATSEMFDTLLKL 468


>gi|149927804|ref|ZP_01916055.1| Flagellar hook-associated protein [Limnobacter sp. MED105]
 gi|149823426|gb|EDM82657.1| Flagellar hook-associated protein [Limnobacter sp. MED105]
          Length = 576

 Score = 42.9 bits (99), Expect = 0.013,   Method: Composition-based stats.
 Identities = 19/97 (19%), Positives = 34/97 (35%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
           +   IA SGL    A +   S NIAN+ T G        + +  +  ++ +   GV +  
Sbjct: 4   SVYGIALSGLNAARAGLSTTSHNIANSNTVGFNRQQVIQQSRPSTGSDIGYIGQGVDIAS 63

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETA 102
           +    S F+   +       A    K   +  +    
Sbjct: 64  VQRVYSDFINSQEQKATSDAAFYNAKAQQIARVDAMI 100



 Score = 36.4 bits (82), Expect = 1.4,   Method: Composition-based stats.
 Identities = 19/117 (16%), Positives = 37/117 (31%), Gaps = 2/117 (1%)

Query: 17  VQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEE 76
             S+ +     N  N         S    +   S    +       V ++G     F   
Sbjct: 459 AASSAVNPSIGNNENILAVAALQNSRTLFQSNNSAGVSISDGFNQLVSRVGNKTREFNLA 518

Query: 77  FDPGHPVANASGIVK--YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            +    V N     +     VN+  E A++ +  + Y A+ + I  S ++    L +
Sbjct: 519 AESRETVLNQVADSRDALQGVNMDEEAANLIKFQQAYQASGRVISLSKELFDQILSM 575


>gi|46578934|ref|YP_009742.1| flagellar hook-associated protein FlgK [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|46448346|gb|AAS95001.1| flagellar hook-associated protein FlgK, putative [Desulfovibrio
           vulgaris str. Hildenborough]
 gi|311232792|gb|ADP85646.1| flagellar hook-associated protein FlgK [Desulfovibrio vulgaris
           RCH1]
          Length = 698

 Score = 42.9 bits (99), Expect = 0.013,   Method: Composition-based stats.
 Identities = 13/113 (11%), Positives = 32/113 (28%), Gaps = 10/113 (8%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVR-------VKKIGVDQSTFVEEFDPGHPV 83
           N+              K ++       SG          +  +    +   +     H  
Sbjct: 586 NSGDNNSAKEIAALSTKKVTVSMFSSNSGNQSLSEFYSSIVAVVGADTASAKFNKAFHQA 645

Query: 84  ANASGIVKYPNVNVL---VETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            +     +  +V+ +    E A + +    Y A  + +  + +M    L L +
Sbjct: 646 MSDDIDSRMSSVSGVNLDEEMASLVKFQHSYKAAAKLVTTADEMFQVLLRLKQ 698



 Score = 36.0 bits (81), Expect = 1.7,   Method: Composition-based stats.
 Identities = 15/120 (12%), Positives = 34/120 (28%), Gaps = 8/120 (6%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             + +  ++  + L    + +Q    NIAN  T G +     +       +       GV
Sbjct: 1   MSISSLFNLGWNALNGAQSAIQTTGNNIANVNTPGYSRQEVRFEEAPTLDKFGGQMGQGV 60

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
              ++    + F+                +Y  +  +    +         AN   I  +
Sbjct: 61  YAAEVIRHFNKFLFSSYLDKYSTQQRWEKQYEELQGVENLFN--------EANTSGINAA 112


>gi|34558066|ref|NP_907881.1| flagellar hook protein FlgE [Wolinella succinogenes DSM 1740]
 gi|34483784|emb|CAE10781.1| FLAGELLAR HOOK PROTEIN FLGE [Wolinella succinogenes]
          Length = 745

 Score = 42.9 bits (99), Expect = 0.013,   Method: Composition-based stats.
 Identities = 6/47 (12%), Positives = 19/47 (40%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             +++  NV++     ++    R Y  N +      +++   + L +
Sbjct: 699 DSMLETSNVDIGAALTELIVLQRGYSFNAKAFTTGDELIKEAIGLKK 745


>gi|16760054|ref|NP_455671.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Typhi str. CT18]
 gi|29142175|ref|NP_805517.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
 gi|213161843|ref|ZP_03347553.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Typhi str. E00-7866]
 gi|213424681|ref|ZP_03357446.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Typhi str. E02-1180]
 gi|213582038|ref|ZP_03363864.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-0664]
 gi|213613180|ref|ZP_03371006.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-2068]
 gi|213648927|ref|ZP_03378980.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Typhi str. J185]
 gi|213865504|ref|ZP_03387623.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Typhi str. M223]
 gi|289828579|ref|ZP_06546404.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-3139]
 gi|25298925|pir||AC0640 probable flagellar basal-body rod protein FlgF (proximal rod
           protein) STY1217 [imported] - Salmonella enterica subsp.
           enterica serovar Typhi (strain CT18)
 gi|16502348|emb|CAD08302.1| putative flagellar basal-body rod protein FlgF (proximal rod
           protein) [Salmonella enterica subsp. enterica serovar
           Typhi]
 gi|29137805|gb|AAO69366.1| putative flagellar basal-body rod protein FlgF [Salmonella enterica
           subsp. enterica serovar Typhi str. Ty2]
          Length = 251

 Score = 42.9 bits (99), Expect = 0.013,   Method: Composition-based stats.
 Identities = 14/102 (13%), Positives = 29/102 (28%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           N     +T       +   +    +  S     +     Q+           +   SG++
Sbjct: 147 NPGDPPNTVAPVGRLKLVKAEGNEVQRSDDGLFRLTAEAQAERGAVLAADPSIRIMSGVL 206

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NV  +    DM    R +   ++ I    +       LL
Sbjct: 207 EGSNVKPVEAMTDMIANARRFEMQMKVITSVDENEGRANQLL 248


>gi|23016696|ref|ZP_00056449.1| COG1256: Flagellar hook-associated protein [Magnetospirillum
           magnetotacticum MS-1]
          Length = 858

 Score = 42.9 bits (99), Expect = 0.013,   Method: Composition-based stats.
 Identities = 15/102 (14%), Positives = 35/102 (34%)

Query: 32  ARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVK 91
           A  +  T  +        S+    H +  +         S   +++      A       
Sbjct: 757 AAMSTKTNMATAGSLYAGSYNFAEHAAASIAQVSTDAAHSKDRQDYQTTLGQALDKQYAS 816

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
              VN+  E A+M    + Y A+ + I    +M+   +++++
Sbjct: 817 TSGVNLDEEVANMINFQQAYSASAKVISTLQEMLDVLVNIVK 858


>gi|121601652|ref|YP_989405.1| putative flagellar basal-body rod protein FlgF [Bartonella
           bacilliformis KC583]
 gi|120613829|gb|ABM44430.1| putative flagellar basal-body rod protein FlgF [Bartonella
           bacilliformis KC583]
          Length = 244

 Score = 42.9 bits (99), Expect = 0.013,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 23/47 (48%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
             G V+  NVN + E   + E +R +      ++Q  +M + ++ +L
Sbjct: 194 MQGYVESSNVNGVAEMTRLIEVSRAFERVEAMLRQQEEMRSKSIQIL 240


>gi|167626161|ref|YP_001676455.1| flagellar hook-associated protein FlgK [Shewanella halifaxensis
           HAW-EB4]
 gi|167356183|gb|ABZ78796.1| flagellar hook-associated protein FlgK [Shewanella halifaxensis
           HAW-EB4]
          Length = 457

 Score = 42.9 bits (99), Expect = 0.013,   Method: Composition-based stats.
 Identities = 10/61 (16%), Positives = 21/61 (34%)

Query: 70  QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
           Q+   +       +           VN+  E  ++    + Y AN + I  +  +  T L
Sbjct: 395 QAQMSKTTAENLQMEAQKQWASTSGVNMDEEGVNLIIYQQSYQANAKVISTADQLFQTIL 454

Query: 130 D 130
           +
Sbjct: 455 N 455


>gi|291539399|emb|CBL12510.1| flagellar hook-associated protein FlgK [Roseburia intestinalis
          XB6B4]
          Length = 613

 Score = 42.9 bits (99), Expect = 0.014,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 23/65 (35%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M        IA+SGL+     +   + NI+N +T G +                 +GS G
Sbjct: 1  MPSTFFGLTIASSGLSAYQVALNTSANNISNVQTKGYSKQQANRVASESIRAYAKYGSMG 60

Query: 61 VRVKK 65
            V  
Sbjct: 61 TGVTT 65


>gi|312109475|ref|YP_003987791.1| flagellar hook-associated protein FlgK [Geobacillus sp. Y4.1MC1]
 gi|311214576|gb|ADP73180.1| flagellar hook-associated protein FlgK [Geobacillus sp. Y4.1MC1]
          Length = 534

 Score = 42.9 bits (99), Expect = 0.014,   Method: Composition-based stats.
 Identities = 12/102 (11%), Positives = 30/102 (29%)

Query: 29  IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASG 88
           I N      +           S        G +    +   Q+  ++        +  + 
Sbjct: 426 ITNGSAALPSGSGTTVSVPITSGTVQTFYQGLIGKIGVDGQQAERMKTNAETLATSVDNK 485

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
                +V++  E  +M +    Y A  + I    +M+   ++
Sbjct: 486 RQSVSSVSLDEEMTNMIKFQHAYNAAARMITAIDEMLDKIIN 527



 Score = 38.7 bits (88), Expect = 0.29,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 26/78 (33%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M        +A  G+  Q A + + + NIANA T G +     +          M+    
Sbjct: 1  MLSTFHGLEVAKRGMFTQQAALYVTAHNIANANTPGYSRQRVNFVETEPFPPASMNRPQI 60

Query: 61 VRVKKIGVDQSTFVEEFD 78
                GV+  +     D
Sbjct: 61 PGQMGTGVEAGSIQRIRD 78


>gi|145297460|ref|YP_001140301.1| lateral flagellar hook-associated protein [Aeromonas salmonicida
           subsp. salmonicida A449]
 gi|142850232|gb|ABO88553.1| lateral flagellar hook-associated protein [Aeromonas salmonicida
           subsp. salmonicida A449]
          Length = 439

 Score = 42.9 bits (99), Expect = 0.014,   Method: Composition-based stats.
 Identities = 15/98 (15%), Positives = 34/98 (34%), Gaps = 2/98 (2%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           ++  +I  SGL      + + ++NIAN  T G +         ++S    +    GV V 
Sbjct: 1   MSMLNIGLSGLNAAQIALNVTAQNIANVNTIGYSRQEA--MMGSLSGFGRLDNGMGVEVT 58

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETA 102
            +      ++         +  +    +  +N   +  
Sbjct: 59  GVRRITDDYLVSQHWRSRSSTGASYSFHQYINTTEQLL 96



 Score = 42.6 bits (98), Expect = 0.017,   Method: Composition-based stats.
 Identities = 15/84 (17%), Positives = 29/84 (34%), Gaps = 2/84 (2%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
             S  +      G    + G  ++T   + +    +A     V    VN   E   +   
Sbjct: 357 KDSQYDAYSALLGRMAVQSGQAKATMEADANMEKQLATKLSSV--SGVNTDEEGVKIMAY 414

Query: 108 NRLYMANLQTIKQSHDMMTTTLDL 131
            + Y AN + I  S  +  + L++
Sbjct: 415 TKAYQANAKVISTSDQLFNSILNM 438


>gi|162147445|ref|YP_001601906.1| flagellar hook protein flgE [Gluconacetobacter diazotrophicus PAl
           5]
 gi|209545555|ref|YP_002277784.1| hypothetical protein Gdia_3444 [Gluconacetobacter diazotrophicus
           PAl 5]
 gi|161786022|emb|CAP55604.1| putative flagellar hook protein flgE [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|209533232|gb|ACI53169.1| protein of unknown function DUF1078 domain protein
           [Gluconacetobacter diazotrophicus PAl 5]
          Length = 569

 Score = 42.9 bits (99), Expect = 0.014,   Method: Composition-based stats.
 Identities = 12/100 (12%), Positives = 32/100 (32%)

Query: 34  TTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
           + GDT         T +  + ++   G          +                G V+  
Sbjct: 469 SNGDTQLIGKVALSTFANVDGLNAVTGQAYTATAASGAAQTGTVGSNGTGTLEVGYVESS 528

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             ++  + + +      Y AN + +  + D++  T+ + +
Sbjct: 529 TTDLTSDLSALIVDQEAYSANTKVVTTADDLLQATISMKQ 568



 Score = 34.5 bits (77), Expect = 4.5,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 21/44 (47%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
            +  +   A SG+  QS     +S NIAN++T G    S  ++
Sbjct: 1  MSVFNALSTAVSGIDAQSTAFTNLSNNIANSQTVGYKAESTSFQ 44


>gi|254994393|ref|ZP_05276583.1| flagellar hook protein FlgE [Listeria monocytogenes FSL J2-064]
          Length = 62

 Score = 42.9 bits (99), Expect = 0.014,   Method: Composition-based stats.
 Identities = 8/58 (13%), Positives = 24/58 (41%)

Query: 76  EFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
                     +   ++  NV++  E  ++      +  N + I+ + D+M   ++L++
Sbjct: 5   VAGQNGAGGISGSSLEGSNVDLSREFVNLMTYQSGFQGNTKVIRVADDVMKQIVNLIQ 62


>gi|194365679|ref|YP_002028289.1| flagellar basal body rod protein FlgF [Stenotrophomonas maltophilia
           R551-3]
 gi|194348483|gb|ACF51606.1| flagellar basal-body rod protein FlgF [Stenotrophomonas maltophilia
           R551-3]
          Length = 249

 Score = 42.9 bits (99), Expect = 0.014,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 26/64 (40%)

Query: 70  QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
            +  ++ F P    A  SG ++  NV+       M +  R Y   +Q IK   +   +  
Sbjct: 183 NTDPLQPFAPAQGTAVHSGQLEGSNVDAAGALVQMIQLQRQYEMQVQVIKHGDENARSAN 242

Query: 130 DLLR 133
            +LR
Sbjct: 243 SMLR 246


>gi|56421866|ref|YP_149184.1| flagellar hook-basal body protein [Geobacillus kaustophilus HTA426]
 gi|56381708|dbj|BAD77616.1| flagellar hook-basal body protein [Geobacillus kaustophilus HTA426]
          Length = 273

 Score = 42.9 bits (99), Expect = 0.015,   Method: Composition-based stats.
 Identities = 17/106 (16%), Positives = 36/106 (33%), Gaps = 1/106 (0%)

Query: 29  IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASG 88
           +    T G            I   +++   GG       V  +           ++   G
Sbjct: 168 LTATNTDGRVVARVNLGVTMIRRPQLLEARGGNVYALPNVPGAAEELNGSLRGQISVKQG 227

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
            ++  NV++  E   +  T+R Y  N + +  S  M+   ++ +R 
Sbjct: 228 ALEQANVDLGEEMVGLMATSRAYQLNARAVSISEQMLG-LINGMRS 272



 Score = 36.8 bits (83), Expect = 1.1,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 21/59 (35%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
          ++ S   A + +     R+  IS NIAN+ T G       +        + +      R
Sbjct: 1  MLRSMLTAANTMNALQQRLDTISHNIANSNTVGFKRREASFAELLTQQIDRLPNDEAPR 59


>gi|57169005|ref|ZP_00368134.1| flagellar hook-associated protein 1 (HAP1) (flgK) [Campylobacter
           coli RM2228]
 gi|305432258|ref|ZP_07401421.1| flagellar hook-associated protein FlgK [Campylobacter coli JV20]
 gi|57019671|gb|EAL56360.1| flagellar hook-associated protein 1 (HAP1) (flgK) [Campylobacter
           coli RM2228]
 gi|304444606|gb|EFM37256.1| flagellar hook-associated protein FlgK [Campylobacter coli JV20]
          Length = 608

 Score = 42.9 bits (99), Expect = 0.015,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 30/109 (27%), Gaps = 2/109 (1%)

Query: 26  SENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVAN 85
             ++AN          + Y          M         KIG D             + N
Sbjct: 499 GNDMANKIIQLQYDKVNFYNEDGTIDNLTMEEYYRKLTGKIGSDGENNNVVNASNQTLYN 558

Query: 86  A--SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  S       VN   E A + +    Y A  + +     M+ T L L 
Sbjct: 559 SVYSEYQSKSGVNTNEELAALIQWQSSYGAAAKIVTTVDQMLDTLLGLK 607



 Score = 35.6 bits (80), Expect = 2.1,   Method: Composition-based stats.
 Identities = 11/72 (15%), Positives = 21/72 (29%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            +  + +   +GL     ++     NI+NA  T  T                +    G 
Sbjct: 1  MGIFGTLYTGVTGLKASEVQIATTGNNISNANATFYTRQRVVQTTNGYITTGGVQVGTGT 60

Query: 62 RVKKIGVDQSTF 73
           V+ I      +
Sbjct: 61 TVESIVRLHDEY 72


>gi|74101664|gb|AAZ99754.1| FlgKL [Aeromonas hydrophila]
          Length = 437

 Score = 42.9 bits (99), Expect = 0.015,   Method: Composition-based stats.
 Identities = 15/84 (17%), Positives = 29/84 (34%), Gaps = 2/84 (2%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
             S  +      G    + G  ++T   + +    +A     V    VN   E   +   
Sbjct: 355 KDSQYDAYSALLGRMAVQSGQAKATMEADANMEKQLATKLSSV--SGVNTDEEGVKIMAY 412

Query: 108 NRLYMANLQTIKQSHDMMTTTLDL 131
            + Y AN + I  S  +  + L++
Sbjct: 413 TKAYQANAKVISTSDQLFNSILNM 436



 Score = 41.8 bits (96), Expect = 0.033,   Method: Composition-based stats.
 Identities = 15/95 (15%), Positives = 32/95 (33%), Gaps = 2/95 (2%)

Query: 8   AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
            +I  SGL      + + ++NIAN  T G +         ++S    +    GV V  + 
Sbjct: 2   LNIGFSGLNAAQIALNVTAQNIANVNTIGYSRQEA--MMGSLSGFGRLDNGMGVEVTGVR 59

Query: 68  VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETA 102
                ++         +  +    +  +N   +  
Sbjct: 60  RITDDYLVSQHWRSRSSTGASYSFHQYINTTEQLL 94


>gi|261253613|ref|ZP_05946186.1| flagellar basal-body rod protein FlgF [Vibrio orientalis CIP
           102891]
 gi|260937004|gb|EEX92993.1| flagellar basal-body rod protein FlgF [Vibrio orientalis CIP
           102891]
          Length = 249

 Score = 42.9 bits (99), Expect = 0.015,   Method: Composition-based stats.
 Identities = 12/62 (19%), Positives = 26/62 (41%)

Query: 72  TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
                ++    V   +G ++  NVN + E   + +  R +   ++ +  + DM   +  L
Sbjct: 186 DPNTAYEADADVKLLTGAIEGSNVNAIGEMTSLIDLQRQFEMQVKMMSTAEDMDKASDSL 245

Query: 132 LR 133
           LR
Sbjct: 246 LR 247


>gi|297570285|ref|YP_003691629.1| flagellar hook-associated protein FlgK [Desulfurivibrio
           alkaliphilus AHT2]
 gi|296926200|gb|ADH87010.1| flagellar hook-associated protein FlgK [Desulfurivibrio
           alkaliphilus AHT2]
          Length = 870

 Score = 42.9 bits (99), Expect = 0.015,   Method: Composition-based stats.
 Identities = 16/101 (15%), Positives = 29/101 (28%), Gaps = 2/101 (1%)

Query: 33  RTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKY 92
                         +  S     +   G    K               + +      V  
Sbjct: 772 SNLQHKDDIHFLGGRVSSLNGFYNSLVGDIGNKGRTIDRNVEFNTLVLNQMNEMRDTV-- 829

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             V++  E A++ +    Y A  + I  S +M+ T LD +R
Sbjct: 830 SGVSLDEEMANLIKFQHAYTAAARLISTSDEMLVTLLDTVR 870



 Score = 38.7 bits (88), Expect = 0.26,   Method: Composition-based stats.
 Identities = 19/99 (19%), Positives = 31/99 (31%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  L    + A   L  Q   +Q+   N+AN  T G +  +   R             GG
Sbjct: 1  MAGLTHVLNTAKQALLTQQRSIQVTGHNVANVDTPGYSRQTHNIRANHAVQMGNALLGGG 60

Query: 61 VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
          V    I      F+ E          +   +  ++ V+ 
Sbjct: 61 VSPDTITRSYDQFMVERITRQSSLMGNLQAQQQSLRVVE 99


>gi|149188067|ref|ZP_01866362.1| flagellar basal body rod protein FlgF [Vibrio shilonii AK1]
 gi|148838055|gb|EDL54997.1| flagellar basal body rod protein FlgF [Vibrio shilonii AK1]
          Length = 249

 Score = 42.9 bits (99), Expect = 0.016,   Method: Composition-based stats.
 Identities = 12/64 (18%), Positives = 25/64 (39%)

Query: 70  QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
                  +     V   +G ++  NVN + E   + +  R +   ++ +  + DM   + 
Sbjct: 184 NKDPQLGYTASANVQLMTGAIEGSNVNAVGEMTSLIDLQRQFEMQVKLMSTAEDMDKASD 243

Query: 130 DLLR 133
            LLR
Sbjct: 244 SLLR 247


>gi|323495376|ref|ZP_08100453.1| flagellar basal body rod protein FlgF [Vibrio brasiliensis LMG
           20546]
 gi|323310299|gb|EGA63486.1| flagellar basal body rod protein FlgF [Vibrio brasiliensis LMG
           20546]
          Length = 249

 Score = 42.9 bits (99), Expect = 0.016,   Method: Composition-based stats.
 Identities = 12/62 (19%), Positives = 26/62 (41%)

Query: 72  TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
                ++    V   +G ++  NVN + E   + +  R +   ++ +  + DM   +  L
Sbjct: 186 DPNAAYEADADVKLLTGAIEGSNVNAIGEMTSLIDLQRQFEMQVKMMSTAEDMDKASDSL 245

Query: 132 LR 133
           LR
Sbjct: 246 LR 247


>gi|260222464|emb|CBA32054.1| Flagellar basal-body rod protein flgB [Curvibacter putative
           symbiont of Hydra magnipapillata]
          Length = 166

 Score = 42.9 bits (99), Expect = 0.016,   Method: Composition-based stats.
 Identities = 27/143 (18%), Positives = 52/143 (36%), Gaps = 15/143 (10%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             L  +    + GL +++ R ++I+ NIANA T G + G D   +K ++           
Sbjct: 23  SNLTNALDFQSKGLVLRAERQRVIASNIANADTPGYS-GRDFDFKKAMAEATSGPTIALA 81

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASG--------------IVKYPNVNVLVETADMRET 107
                     T      P  P+  +S                +   +V++  E A+  + 
Sbjct: 82  PPSSGTPADGTTNNRHIPLTPIEGSSIGDNNKLGYTIQTQPAMDGNSVDLDRERANFVDN 141

Query: 108 NRLYMANLQTIKQSHDMMTTTLD 130
           +  Y A L+ I  S   + + + 
Sbjct: 142 SVRYEATLRFINGSSRTILSAIQ 164


>gi|328958263|ref|YP_004375649.1| flagellar basal-body rod protein FlgG [Carnobacterium sp. 17-4]
 gi|328674587|gb|AEB30633.1| flagellar basal-body rod protein FlgG [Carnobacterium sp. 17-4]
          Length = 240

 Score = 42.9 bits (99), Expect = 0.016,   Method: Composition-based stats.
 Identities = 8/48 (16%), Positives = 19/48 (39%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
               ++  NV++     +M    R Y  NL+  + + +M +      +
Sbjct: 193 QQNYLEASNVDLASSITEMMLAQRSYSLNLKVAQGTDEMASVINQFKQ 240


>gi|312882658|ref|ZP_07742395.1| flagellar basal body rod protein FlgF [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309369619|gb|EFP97134.1| flagellar basal body rod protein FlgF [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 248

 Score = 42.9 bits (99), Expect = 0.016,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 22/47 (46%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NV+ + E   + +  R +   ++ +  + DM   +  LLR
Sbjct: 200 KGAIEGSNVSAIGEMTSLIDLQRQFEMQVKLMSTAEDMDKASDSLLR 246


>gi|283834454|ref|ZP_06354195.1| flagellar basal-body rod protein FlgF [Citrobacter youngae ATCC
           29220]
 gi|291070001|gb|EFE08110.1| flagellar basal-body rod protein FlgF [Citrobacter youngae ATCC
           29220]
          Length = 245

 Score = 42.9 bits (99), Expect = 0.016,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 24/48 (50%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           + G ++  NV+ + E       NR + A ++ +K + D+  +   LLR
Sbjct: 196 SGGFLEGSNVSAVSEMMSSIAMNRQFEAQIKMMKTAEDLSDSGNRLLR 243


>gi|289804814|ref|ZP_06535443.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Typhi str. AG3]
          Length = 65

 Score = 42.6 bits (98), Expect = 0.016,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 21/41 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I+S  IA +GL  Q   M +I+ N+AN  T G       +
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVF 41


>gi|149908758|ref|ZP_01897419.1| Hypothetical FlgF flagellar basal-body rod protein [Moritella sp.
           PE36]
 gi|149808300|gb|EDM68239.1| Hypothetical FlgF flagellar basal-body rod protein [Moritella sp.
           PE36]
          Length = 240

 Score = 42.6 bits (98), Expect = 0.016,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 22/56 (39%)

Query: 76  EFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             +    VA  SG ++  NVN + E       NR +   ++ +K +  +      L
Sbjct: 182 VGNRAEDVALVSGFLEGSNVNAVTELVSSMMVNRQFELQIKMMKTADTLAQKGNQL 237


>gi|77918761|ref|YP_356576.1| flagellar basal body rod protein [Pelobacter carbinolicus DSM 2380]
 gi|77544844|gb|ABA88406.1| flagellar basal body rod protein [Pelobacter carbinolicus DSM 2380]
          Length = 245

 Score = 42.6 bits (98), Expect = 0.016,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 30/85 (35%), Gaps = 3/85 (3%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
           T     V+   GG +       +          H        ++  NVN++ E + M E+
Sbjct: 161 TFDDYSVLTRQGGGQFSVPKGQERDLEILVKDSHIYQGQ---LERSNVNLMQEMSHMVES 217

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLL 132
            R++ A  + +K  H +      L 
Sbjct: 218 TRVFEACQKMLKTYHSIAAEANKLG 242


>gi|157738166|ref|YP_001490850.1| flagellar hook protein FlgE [Arcobacter butzleri RM4018]
 gi|157700020|gb|ABV68180.1| flagellar hook protein FlgE [Arcobacter butzleri RM4018]
          Length = 583

 Score = 42.6 bits (98), Expect = 0.017,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 22/44 (50%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  NV+       +    R Y A+ ++I  S D + T +D+++
Sbjct: 540 LERSNVSYSSTLTSLMVYQRAYEASSKSITTSDDFLKTAIDMIK 583


>gi|120603465|ref|YP_967865.1| flagellar hook-associated protein FlgK [Desulfovibrio vulgaris DP4]
 gi|120563694|gb|ABM29438.1| flagellar hook-associated protein FlgK [Desulfovibrio vulgaris DP4]
          Length = 698

 Score = 42.6 bits (98), Expect = 0.017,   Method: Composition-based stats.
 Identities = 13/113 (11%), Positives = 32/113 (28%), Gaps = 10/113 (8%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVR-------VKKIGVDQSTFVEEFDPGHPV 83
           N+              K ++       SG          +  +    +   +     H  
Sbjct: 586 NSGDNNSAKEIAALATKKVTVSMFSSNSGNQSLSEFYSSIVAVVGADTASAKFNKAFHQA 645

Query: 84  ANASGIVKYPNVNVL---VETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            +     +  +V+ +    E A + +    Y A  + +  + +M    L L +
Sbjct: 646 MSDDIDSRMSSVSGVNLDEEMASLVKFQHSYKAAAKLVTTADEMFQVLLGLKQ 698



 Score = 36.0 bits (81), Expect = 1.7,   Method: Composition-based stats.
 Identities = 15/120 (12%), Positives = 34/120 (28%), Gaps = 8/120 (6%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             + +  ++  + L    + +Q    NIAN  T G +     +       +       GV
Sbjct: 1   MSISSLFNLGWNALNGAQSAIQTTGNNIANVNTPGYSRQEVRFEEAPTLDKFGGQMGQGV 60

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
              ++    + F+                +Y  +  +    +         AN   I  +
Sbjct: 61  YAAEVIRHFNKFLFSSYLDKYSTQQRWEKQYEELQGVENLFN--------EANTSGINAA 112


>gi|319409192|emb|CBI82836.1| Flagellar basal-body rod protein flgF [Bartonella schoenbuchensis
           R1]
          Length = 244

 Score = 42.6 bits (98), Expect = 0.017,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 23/46 (50%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
            G ++  NVN + E   + E +R +      ++Q  +M + ++ +L
Sbjct: 195 QGYIESSNVNGVSEMTRLIEVSRAFERVEAMLRQQEEMRSKSIQIL 240


>gi|315639201|ref|ZP_07894363.1| flagellar hook-associated protein 1 (HAP1) (flgK) [Campylobacter
           upsaliensis JV21]
 gi|315480527|gb|EFU71169.1| flagellar hook-associated protein 1 (HAP1) (flgK) [Campylobacter
           upsaliensis JV21]
          Length = 608

 Score = 42.6 bits (98), Expect = 0.017,   Method: Composition-based stats.
 Identities = 19/109 (17%), Positives = 30/109 (27%), Gaps = 2/109 (1%)

Query: 26  SENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVAN 85
             ++AN            Y +     E  M         KI  D             + N
Sbjct: 499 GNDMANQIIQLQYDKVSFYNKDGTIDELTMEEYYRKFTGKIASDGENNNVIHKSNMTLYN 558

Query: 86  A--SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  +       VN   E A + +    Y A  + +     M+ T L L 
Sbjct: 559 SVYAEYQSKSGVNTNEELAALIQWQSSYGAAAKIVSTVDQMLDTLLGLK 607



 Score = 35.6 bits (80), Expect = 2.3,   Method: Composition-based stats.
 Identities = 12/71 (16%), Positives = 21/71 (29%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            + A+ H   +GL     ++     NI+NA  T  T                +    G 
Sbjct: 1  MGIFATLHTGVTGLKASEVQIATTGNNISNANATFYTRQRVVQTTNGYITTGGVQVGTGT 60

Query: 62 RVKKIGVDQST 72
           ++ I      
Sbjct: 61 AIESIVRLHDE 71


>gi|299536009|ref|ZP_07049328.1| flagellar hook-associated protein FlgK [Lysinibacillus fusiformis
           ZC1]
 gi|298728614|gb|EFI69170.1| flagellar hook-associated protein FlgK [Lysinibacillus fusiformis
           ZC1]
          Length = 555

 Score = 42.6 bits (98), Expect = 0.017,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 19/42 (45%), Gaps = 1/42 (2%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD-LLR 133
            +V++  E  +M    + Y AN + I    + +   ++ + R
Sbjct: 511 SSVSLDEEMTNMITFQQAYNANARMITVVDETLDKIINGMGR 552



 Score = 35.2 bits (79), Expect = 3.3,   Method: Composition-based stats.
 Identities = 19/121 (15%), Positives = 33/121 (27%), Gaps = 6/121 (4%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGS-----DPYRRKTISFEEVM 55
           M         +  GL  Q   +     NI+NA T G +         P        + + 
Sbjct: 1   MRSTFMGLEASKRGLFTQQTALYTTGHNISNANTLGYSRQRVNMQATPGFPTAGLNQPIY 60

Query: 56  HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
            G  G  V+   + +              N  G       N + +  D+ +    +  N 
Sbjct: 61  PGHLGTGVEAGSIQRIRDEFIDRQYRQETNKFGY-WESRSNAISQMEDIMDEPSQFGLNA 119

Query: 116 Q 116
            
Sbjct: 120 A 120


>gi|222529660|ref|YP_002573542.1| flagellar hook-associated protein FlgK [Caldicellulosiruptor bescii
           DSM 6725]
 gi|222456507|gb|ACM60769.1| flagellar hook-associated protein FlgK [Caldicellulosiruptor bescii
           DSM 6725]
          Length = 525

 Score = 42.6 bits (98), Expect = 0.017,   Method: Composition-based stats.
 Identities = 5/38 (13%), Positives = 17/38 (44%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             V++  E  ++ +    + A+ + I    +M+   ++
Sbjct: 481 SGVSIDEEMTNLIKYQHGFQASARMINAFDEMLDVIVN 518



 Score = 35.6 bits (80), Expect = 2.3,   Method: Composition-based stats.
 Identities = 18/103 (17%), Positives = 34/103 (33%), Gaps = 2/103 (1%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
                IA +G+ V    +++ S N+ANA T G T        K+      +         
Sbjct: 3   FYGLEIARTGIFVNRKGLEVTSHNVANASTPGYT--RQVLNVKSNPPSAKVGFYSPKFQV 60

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
            +G D  +  +  D    V   +   +     +  +  +  E 
Sbjct: 61  GLGADVQSLEQIRDMFLDVQYRNEYSRQGEYEIKADNLNFIEA 103


>gi|77165832|ref|YP_344357.1| hypothetical protein Noc_2369 [Nitrosococcus oceani ATCC 19707]
 gi|254433787|ref|ZP_05047295.1| flagellar hook-associated protein FlgK [Nitrosococcus oceani AFC27]
 gi|76884146|gb|ABA58827.1| conserved hypothetical protein [Nitrosococcus oceani ATCC 19707]
 gi|207090120|gb|EDZ67391.1| flagellar hook-associated protein FlgK [Nitrosococcus oceani AFC27]
          Length = 647

 Score = 42.6 bits (98), Expect = 0.017,   Method: Composition-based stats.
 Identities = 13/80 (16%), Positives = 25/80 (31%), Gaps = 2/80 (2%)

Query: 52  EEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKY--PNVNVLVETADMRETNR 109
                   G  V  +G          D    + + +   +     VN+  E A++    +
Sbjct: 563 TTTYQEQYGRLVADVGARTRQAEANQDTHKTLLDQAVAAREGVSGVNLEEEAANLIRFQQ 622

Query: 110 LYMANLQTIKQSHDMMTTTL 129
            + A  + I  +  M  T L
Sbjct: 623 AFQAAARVISTADTMFQTLL 642



 Score = 40.6 bits (93), Expect = 0.069,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 26/85 (30%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
            I  SGL      +   S NIAN  T G +        +   F        GV V  + 
Sbjct: 7  LGIGASGLLAAQRALATTSHNIANVNTPGFSRQRTELAARLPEFTGQGFIGTGVDVTTVR 66

Query: 68 VDQSTFVEEFDPGHPVANASGIVKY 92
              +F+ E         A   V +
Sbjct: 67 RAYDSFLTEQARYSTSEYAQSKVFH 91


>gi|57505236|ref|ZP_00371165.1| flagellar hook-associated protein 1 (HAP1) (flgK) [Campylobacter
           upsaliensis RM3195]
 gi|57016372|gb|EAL53157.1| flagellar hook-associated protein 1 (HAP1) (flgK) [Campylobacter
           upsaliensis RM3195]
          Length = 608

 Score = 42.6 bits (98), Expect = 0.017,   Method: Composition-based stats.
 Identities = 19/109 (17%), Positives = 30/109 (27%), Gaps = 2/109 (1%)

Query: 26  SENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVAN 85
             ++AN            Y +     E  M         KI  D             + N
Sbjct: 499 GNDMANQIIQLQYDKVSFYNKDGTIDELTMEEYYRKFTGKIASDGENNNVIHKSNMTLYN 558

Query: 86  A--SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  +       VN   E A + +    Y A  + +     M+ T L L 
Sbjct: 559 SVYAEYQSKSGVNTNEELAALIQWQSSYGAAAKIVSTVDQMLDTLLGLK 607



 Score = 35.6 bits (80), Expect = 2.3,   Method: Composition-based stats.
 Identities = 12/71 (16%), Positives = 21/71 (29%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            + A+ H   +GL     ++     NI+NA  T  T                +    G 
Sbjct: 1  MGIFATLHTGVTGLKASEVQIATTGNNISNANATFYTRQRVVQTTNGYITTGGVQVGTGT 60

Query: 62 RVKKIGVDQST 72
           ++ I      
Sbjct: 61 AIESIVRLHDE 71


>gi|320179222|gb|EFW54180.1| Flagellar basal-body rod protein FlgG [Shigella boydii ATCC 9905]
          Length = 54

 Score = 42.6 bits (98), Expect = 0.018,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 21/41 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I+S  IA +GL  Q   M +I+ N+AN  T G       +
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVF 41


>gi|207111880|ref|ZP_03246042.1| flagellar basal body rod protein FlgG [Helicobacter pylori
           HPKX_438_CA4C1]
          Length = 36

 Score = 42.6 bits (98), Expect = 0.018,   Method: Composition-based stats.
 Identities = 11/35 (31%), Positives = 17/35 (48%)

Query: 99  VETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            E  D+    R Y AN ++I+ +  M+ T   L R
Sbjct: 1   EEMTDLITAQRAYEANSKSIQTADAMLQTVNSLKR 35


>gi|88799022|ref|ZP_01114603.1| Flagellar basal body rod protein [Reinekea sp. MED297]
 gi|88778249|gb|EAR09443.1| Flagellar basal body rod protein [Reinekea sp. MED297]
          Length = 247

 Score = 42.6 bits (98), Expect = 0.018,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 25/47 (53%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG V+  NVN + E  ++   NR Y   ++ +K + D+   +  +L+
Sbjct: 199 SGFVEASNVNSVHELTNLLALNRQYETQVKMMKTADDVSRASERILQ 245


>gi|315281358|ref|ZP_07869998.1| flagellar hook protein FlgE [Listeria marthii FSL S4-120]
 gi|313614997|gb|EFR88501.1| flagellar hook protein FlgE [Listeria marthii FSL S4-120]
          Length = 411

 Score = 42.6 bits (98), Expect = 0.018,   Method: Composition-based stats.
 Identities = 15/105 (14%), Positives = 35/105 (33%)

Query: 29  IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASG 88
           IA + + G           T S E+ +   G                          +  
Sbjct: 307 IAVSYSDGTVIPVAQLAVATFSNEDGLVKMGNGEYLPGLSSGDAVYGVAGQNGAGGISGS 366

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NV++  E  ++      +  N + I+ + D+M   ++L++
Sbjct: 367 SLEGSNVDLSREFVNLMTYQSGFQGNTKVIRVADDVMKQIVNLIQ 411



 Score = 38.7 bits (88), Expect = 0.30,   Method: Composition-based stats.
 Identities = 16/93 (17%), Positives = 36/93 (38%), Gaps = 7/93 (7%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +  + + A SG+      + + S NIANA TTG       Y+++++ F ++++ +    V
Sbjct: 1  MNQTMYTAISGMNAFQQALSVTSNNIANANTTG-------YKKQSVVFNDLLYQNTMGSV 53

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVN 96
                 +  +         A  +        +
Sbjct: 54 AGGLYAGTNPMSFGSGSKIGAILTDYTAGSPTS 86


>gi|238796905|ref|ZP_04640409.1| Flagellar basal-body rod protein flgF [Yersinia mollaretii ATCC
           43969]
 gi|238719165|gb|EEQ10977.1| Flagellar basal-body rod protein flgF [Yersinia mollaretii ATCC
           43969]
          Length = 251

 Score = 42.6 bits (98), Expect = 0.018,   Method: Composition-based stats.
 Identities = 13/101 (12%), Positives = 27/101 (26%)

Query: 32  ARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVK 91
           A             +   +  + +               +  +        +    G ++
Sbjct: 148 AGEEPSALAQVGRLKMVNAKLQDLSHGDDGLFHIAETSPNAGLAALPADQNLQLVPGALE 207

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
             NV+ +    DM  T R +  N++ I    D       LL
Sbjct: 208 SSNVSPVKSMVDMIATARGFDMNMKVISAVDDNDKKANQLL 248


>gi|119775449|ref|YP_928189.1| flagellar basal body rod protein FlgF [Shewanella amazonensis SB2B]
 gi|119767949|gb|ABM00520.1| flagellar basal-body rod protein FlgF [Shewanella amazonensis SB2B]
          Length = 247

 Score = 42.6 bits (98), Expect = 0.018,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 24/56 (42%)

Query: 78  DPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
                VA  S  V+  NVN + E   + +  R +   ++ +K + +    +  L+R
Sbjct: 190 PQDETVALESRAVEGSNVNPVEEMVALIDIQRQFELQVKMMKTAEENDKASAQLVR 245


>gi|158423059|ref|YP_001524351.1| putative flagellar basal body rod protein [Azorhizobium caulinodans
           ORS 571]
 gi|158329948|dbj|BAF87433.1| putative flagellar basal body rod protein [Azorhizobium caulinodans
           ORS 571]
          Length = 257

 Score = 42.6 bits (98), Expect = 0.018,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 40/105 (38%), Gaps = 1/105 (0%)

Query: 29  IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASG 88
           +A+    G +         T +  + M    G   +  G              P    +G
Sbjct: 154 LASTDADGRSQALYRIPLATTANPDGMTPVAGDAFQP-GSASGPARTFVSGQGPGTIRAG 212

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NV++  E  D+  +   +MAN +T++   +M+   L++ R
Sbjct: 213 YLEDSNVDMATEMTDLVTSQASFMANFRTVRMGIEMLDVVLNMKR 257



 Score = 34.1 bits (76), Expect = 7.5,   Method: Composition-based stats.
 Identities = 13/35 (37%), Positives = 18/35 (51%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTG 36
            L     I  SGL  Q  ++  +++N ANART G
Sbjct: 7  MALADVIGIGASGLRAQVVKVATVADNTANARTPG 41


>gi|260466625|ref|ZP_05812813.1| flagellar basal-body rod protein FlgF [Mesorhizobium opportunistum
           WSM2075]
 gi|259029631|gb|EEW30919.1| flagellar basal-body rod protein FlgF [Mesorhizobium opportunistum
           WSM2075]
          Length = 240

 Score = 42.6 bits (98), Expect = 0.018,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 33/102 (32%), Gaps = 3/102 (2%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVAN---AS 87
           N        GS     + +    + +   GV   + G          +P    ++   A 
Sbjct: 133 NGPPKAGADGSLRQNDQLVGSIGLYNFDPGVNFVRYGNSGIVPARTPEPVTDRSDVGIAQ 192

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
           G V+  NVN ++E   +    R +      ++Q+       +
Sbjct: 193 GFVEESNVNPVLEMTRLIMVQRAFENTAALMRQTDSSTDEAI 234



 Score = 37.5 bits (85), Expect = 0.69,   Method: Composition-based stats.
 Identities = 20/86 (23%), Positives = 35/86 (40%), Gaps = 7/86 (8%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +  S ++A S       R+  I++N+ANA T G       +R   + FE+V+ G+G   V
Sbjct: 1  MRDSLYVALSAQMALERRLDTIADNVANANTVG-------FRATGVKFEDVVSGTGQKSV 53

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGI 89
                ++       P +   N    
Sbjct: 54 SFASSGKTYLSGAHGPLNETGNPFDF 79


>gi|46204473|ref|ZP_00049952.2| COG1749: Flagellar hook protein FlgE [Magnetospirillum
           magnetotacticum MS-1]
          Length = 127

 Score = 42.6 bits (98), Expect = 0.018,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 24/46 (52%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             V+  N ++  E + M  T + Y AN + +  +  M++  L+++R
Sbjct: 82  ANVEQSNTDIAAEFSKMIVTQQAYSANTRVMSTAQTMISDLLNVIR 127


>gi|126441590|ref|YP_001057329.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           668]
 gi|134283597|ref|ZP_01770296.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           305]
 gi|217425071|ref|ZP_03456567.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           576]
 gi|226199842|ref|ZP_03795393.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           Pakistan 9]
 gi|237810468|ref|YP_002894919.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           MSHR346]
 gi|238562529|ref|ZP_00440322.2| flagellar hook-associated protein FlgK [Burkholderia mallei GB8
           horse 4]
 gi|251767452|ref|ZP_02267340.2| flagellar hook-associated protein 1 [Burkholderia mallei PRL-20]
 gi|254188065|ref|ZP_04894577.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           Pasteur 52237]
 gi|254201902|ref|ZP_04908266.1| flagellar hook-associated protein 1 [Burkholderia mallei FMH]
 gi|254207237|ref|ZP_04913588.1| flagellar hook-associated protein 1 [Burkholderia mallei JHU]
 gi|254295821|ref|ZP_04963278.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           406e]
 gi|126221083|gb|ABN84589.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           668]
 gi|134245006|gb|EBA45101.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           305]
 gi|147747796|gb|EDK54872.1| flagellar hook-associated protein 1 [Burkholderia mallei FMH]
 gi|147752779|gb|EDK59845.1| flagellar hook-associated protein 1 [Burkholderia mallei JHU]
 gi|157805698|gb|EDO82868.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           406e]
 gi|157935745|gb|EDO91415.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           Pasteur 52237]
 gi|217392091|gb|EEC32117.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           576]
 gi|225928193|gb|EEH24229.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           Pakistan 9]
 gi|237506435|gb|ACQ98753.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           MSHR346]
 gi|238522496|gb|EEP85940.1| flagellar hook-associated protein FlgK [Burkholderia mallei GB8
           horse 4]
 gi|243062745|gb|EES44931.1| flagellar hook-associated protein 1 [Burkholderia mallei PRL-20]
          Length = 714

 Score = 42.6 bits (98), Expect = 0.019,   Method: Composition-based stats.
 Identities = 21/132 (15%), Positives = 42/132 (31%), Gaps = 2/132 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             ++    ++ SG      +  I +    N              +   +    + G+   
Sbjct: 581 SGVMNGVSVSLSGTPADGDQFTIGANKGTNDGRNALALSQLVNSKTMNNGTTTLTGAYAG 640

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYP--NVNVLVETADMRETNRLYMANLQTIK 119
            V  IG   S           +       +     VN   E A++ +  +LY AN + I+
Sbjct: 641 YVNAIGNAASQLKASSAAQTALVGQITQAQQSVSGVNQNEEAANLMQYQQLYQANAKVIQ 700

Query: 120 QSHDMMTTTLDL 131
            ++ +  T L L
Sbjct: 701 TANSVFQTVLGL 712


>gi|187932642|ref|YP_001885066.1| flagellar basal body rod protein FlgG [Clostridium botulinum B str.
           Eklund 17B]
 gi|187720795|gb|ACD22016.1| flagellar hook-basal body complex protein [Clostridium botulinum B
           str. Eklund 17B]
          Length = 257

 Score = 42.6 bits (98), Expect = 0.019,   Method: Composition-based stats.
 Identities = 9/54 (16%), Positives = 19/54 (35%)

Query: 77  FDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
                 V    G+++  NVN   E   + E  R +  N + +    + +    +
Sbjct: 198 PVYNAVVNVRQGVLETSNVNPTEELVKLMEIKRQFETNQKFVSMQDETVQKAAN 251


>gi|254255088|ref|ZP_04948405.1| Flagellar basal body rod protein [Burkholderia dolosa AUO158]
 gi|124899733|gb|EAY71576.1| Flagellar basal body rod protein [Burkholderia dolosa AUO158]
          Length = 241

 Score = 42.6 bits (98), Expect = 0.019,   Method: Composition-based stats.
 Identities = 11/58 (18%), Positives = 24/58 (41%)

Query: 76  EFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           E+D    V    G ++  N++ + E        R +   ++  + + +M  T   L+R
Sbjct: 183 EYDADETVTVKGGHLEGSNISAIEEMMQTLSLTRSFEMQMRLYRAADEMADTGNRLIR 240


>gi|323341352|ref|ZP_08081596.1| hypothetical protein HMPREF0542_12027 [Lactobacillus ruminis ATCC
          25644]
 gi|323091229|gb|EFZ33857.1| hypothetical protein HMPREF0542_12027 [Lactobacillus ruminis ATCC
          25644]
          Length = 514

 Score = 42.6 bits (98), Expect = 0.019,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 25/78 (32%), Gaps = 1/78 (1%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG- 59
          M  L  +   A SG+      +Q  + NIAN  T G +        K           G 
Sbjct: 1  MSGLFGTLGTATSGITANQVALQTTAHNIANTNTDGYSRQRVHMTTKPPYVIAGTGTIGT 60

Query: 60 GVRVKKIGVDQSTFVEEF 77
          GV V  +      FV   
Sbjct: 61 GVNVTGVERVVDDFVRSQ 78



 Score = 38.3 bits (87), Expect = 0.39,   Method: Composition-based stats.
 Identities = 8/39 (20%), Positives = 20/39 (51%)

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
              VN+  E +D+ +  + + AN + +    +M+ T ++
Sbjct: 472 MSGVNINEEMSDVIKFQQGFQANTRVLSVIAEMLDTLVN 510


>gi|16126302|ref|NP_420866.1| flagellar basal-body rod protein FlgF [Caulobacter crescentus CB15]
 gi|221235079|ref|YP_002517515.1| flagellar basal-body rod protein FlgF [Caulobacter crescentus
           NA1000]
 gi|13637950|sp|Q06171|FLGF_CAUCR RecName: Full=Flagellar basal-body rod protein flgF
 gi|13423542|gb|AAK24034.1| flagellar basal-body rod protein FlgF [Caulobacter crescentus CB15]
 gi|220964251|gb|ACL95607.1| flagellar basal-body rod protein flgF [Caulobacter crescentus
           NA1000]
          Length = 245

 Score = 42.6 bits (98), Expect = 0.019,   Method: Composition-based stats.
 Identities = 8/54 (14%), Positives = 23/54 (42%)

Query: 77  FDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             P        G+++  NV  ++E   + E  R Y +  + +  + ++  + ++
Sbjct: 186 PQPVTDAQIHQGMLEASNVQPVIEITKLIEIQRAYESVAKMMDNTAELSRSAVE 239


>gi|285018208|ref|YP_003375919.1| flagellar basal-body rod protein flgf [Xanthomonas albilineans GPE
           PC73]
 gi|283473426|emb|CBA15931.1| probable flagellar basal-body rod protein flgf [Xanthomonas
           albilineans]
          Length = 251

 Score = 42.6 bits (98), Expect = 0.019,   Method: Composition-based stats.
 Identities = 14/100 (14%), Positives = 28/100 (28%)

Query: 34  TTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
             G+ P +                        +        + F      A  +G ++  
Sbjct: 149 PLGEGPQAMSAIGTLKVVTAPADQLTRRPDGLMRNISEDPTKAFPLATGTALHTGALEGS 208

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           NV+       M +  R +   ++ IK   +   +   LLR
Sbjct: 209 NVDAAGALVQMIQLQRQFEMQVKVIKNGDENAQSANTLLR 248


>gi|332669180|ref|YP_004452188.1| flagellar hook-associated protein FlgK [Cellulomonas fimi ATCC 484]
 gi|332338218|gb|AEE44801.1| flagellar hook-associated protein FlgK [Cellulomonas fimi ATCC 484]
          Length = 480

 Score = 42.6 bits (98), Expect = 0.019,   Method: Composition-based stats.
 Identities = 15/94 (15%), Positives = 30/94 (31%)

Query: 37  DTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVN 96
            + G      KT       H S  V    +    ++   +      V      +   +V+
Sbjct: 380 GSVGDQIAALKTDETGPDAHWSATVVDLGVRAASASARSKVAESARVTAQQQQLAATSVD 439

Query: 97  VLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
              ET +M    R Y    + +    +M+ T ++
Sbjct: 440 TDEETVNMLAFQRAYEGAARVLTAVDEMLDTLIN 473



 Score = 36.4 bits (82), Expect = 1.4,   Method: Composition-based stats.
 Identities = 18/69 (26%), Positives = 24/69 (34%), Gaps = 5/69 (7%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSD-----PYRRKTISFEEVMHGSG 59
           +    A S L  Q   + +  +N+ANA T G T         P  +    F        
Sbjct: 4  FSGLGTALSSLIAQRQALDVAGQNVANANTVGYTRQRASMSALPAAQVPSMFSVNHGAGE 63

Query: 60 GVRVKKIGV 68
          GVRV  I  
Sbjct: 64 GVRVTGIER 72


>gi|297538902|ref|YP_003674671.1| flagellar hook-associated protein FlgK [Methylotenera sp. 301]
 gi|297258249|gb|ADI30094.1| flagellar hook-associated protein FlgK [Methylotenera sp. 301]
          Length = 650

 Score = 42.6 bits (98), Expect = 0.019,   Method: Composition-based stats.
 Identities = 17/104 (16%), Positives = 29/104 (27%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +     I  S LA     +     NIANA T G +                 +   G  V
Sbjct: 1   MADILSIGKSALAAAQVGLSTTGHNIANASTPGYSRQVVIQAAAQAQSSGSGYIGQGTEV 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
             I    +  + +       A++S  V    ++ +         
Sbjct: 61  ASITRAFNEILSKQVVNSQAASSSSQVYASQLSNINNMLSDASA 104



 Score = 36.0 bits (81), Expect = 1.5,   Method: Composition-based stats.
 Identities = 8/41 (19%), Positives = 18/41 (43%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             VN+  E  ++    + Y A  + ++ +  +  T L L +
Sbjct: 610 SGVNLDEEATNLLRYQQAYQAAGKMMQIASQLFDTLLQLGK 650


>gi|78043872|ref|YP_359837.1| flagellar basal-body rod protein FlgB [Carboxydothermus
           hydrogenoformans Z-2901]
 gi|77995987|gb|ABB14886.1| flagellar basal-body rod protein FlgB [Carboxydothermus
           hydrogenoformans Z-2901]
          Length = 136

 Score = 42.6 bits (98), Expect = 0.019,   Method: Composition-based stats.
 Identities = 21/121 (17%), Positives = 42/121 (34%), Gaps = 1/121 (0%)

Query: 14  GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTF 73
           G+   + R Q I+ NIAN  T G       +  K   F     G+  ++        +  
Sbjct: 15  GIDAATIRQQAIAHNIANVNTPGYRKEVVVFEEKVQEFLNQKKGNFSLKTTHPRHLTAKG 74

Query: 74  VEEFDPGHPVANASGI-VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
                      N++ + +   NV++  E  D+      Y   ++ +K +   +   +   
Sbjct: 75  FSLPFAEIKRENSTAMRIDKNNVDIETEMVDLAYNQLYYETAVERLKGTLASLEMVITGG 134

Query: 133 R 133
           R
Sbjct: 135 R 135


>gi|57167708|ref|ZP_00366848.1| flagellar basal-body rod protein (flgG) [Campylobacter coli RM2228]
 gi|305433214|ref|ZP_07402370.1| flagellar basal-body rod protein [Campylobacter coli JV20]
 gi|57020830|gb|EAL57494.1| flagellar basal-body rod protein (flgG) [Campylobacter coli RM2228]
 gi|304443915|gb|EFM36572.1| flagellar basal-body rod protein [Campylobacter coli JV20]
          Length = 270

 Score = 42.6 bits (98), Expect = 0.019,   Method: Composition-based stats.
 Identities = 13/101 (12%), Positives = 27/101 (26%), Gaps = 2/101 (1%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           N    G          +    +     +       +           D  +  A   G  
Sbjct: 165 NVDKNGSIEVDGVQNARLFIAQVDDIRALQKDGDNVYRID-DLTRIRDLDNSNAVRQGFS 223

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQS-HDMMTTTLD 130
           +  NVN + E   + E NR+     + +     D+    ++
Sbjct: 224 QGSNVNPVTEMVGLIEANRMVEMYQKVMTAHMDDLNQEAIN 264


>gi|300114793|ref|YP_003761368.1| flagellar hook-associated protein FlgK [Nitrosococcus watsonii
           C-113]
 gi|299540730|gb|ADJ29047.1| flagellar hook-associated protein FlgK [Nitrosococcus watsonii
           C-113]
          Length = 647

 Score = 42.6 bits (98), Expect = 0.020,   Method: Composition-based stats.
 Identities = 24/137 (17%), Positives = 36/137 (26%), Gaps = 11/137 (8%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
                   I  SGL      +   S NIAN  T G +        +   F        GV
Sbjct: 1   MPSSDLLGIGASGLLAAQRALATTSHNIANVNTPGFSRQRAELAARLPEFTGQGFIGTGV 60

Query: 62  RVKKIGVDQSTFVEEFDPG--HPVANASGIVKYP----NVNVLVETADMRETNRLYMANL 115
            V  +     +F+ E         A +           N+    ET     +   + A  
Sbjct: 61  DVTTVRRAYDSFLTEQARHATSEYAQSKAFHDLAAQVDNLFADSETGLSTSSQHFFNAAQ 120

Query: 116 QTIK-----QSHDMMTT 127
                     +  M+ T
Sbjct: 121 ALANDPSSPAARQMLLT 137



 Score = 41.8 bits (96), Expect = 0.034,   Method: Composition-based stats.
 Identities = 14/80 (17%), Positives = 26/80 (32%), Gaps = 2/80 (2%)

Query: 52  EEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKY--PNVNVLVETADMRETNR 109
                   G  V ++G          D    + + +   K     VN+  E A++    +
Sbjct: 563 TMSYQEQYGRLVAEVGARTRQAEANQDTHKTLLDQAVAEKEGVSGVNLEEEAANLIRFQQ 622

Query: 110 LYMANLQTIKQSHDMMTTTL 129
            + A  + I  +  M  T L
Sbjct: 623 AFQAAARVISTADTMFQTLL 642


>gi|254182133|ref|ZP_04888730.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           1655]
 gi|184212671|gb|EDU09714.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           1655]
          Length = 714

 Score = 42.6 bits (98), Expect = 0.020,   Method: Composition-based stats.
 Identities = 21/132 (15%), Positives = 42/132 (31%), Gaps = 2/132 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             ++    ++ SG      +  I +    N              +   +    + G+   
Sbjct: 581 SGVMNGVSVSLSGTPADGDQFTIGANKGTNDGRNALALSQLVNSKTMNNGTTTLTGAYAG 640

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYP--NVNVLVETADMRETNRLYMANLQTIK 119
            V  IG   S           +       +     VN   E A++ +  +LY AN + I+
Sbjct: 641 YVNAIGNAASQLKASSAAQTALVGQITQAQQSVSGVNQNEEAANLMQYQQLYQANAKVIQ 700

Query: 120 QSHDMMTTTLDL 131
            ++ +  T L L
Sbjct: 701 TANSVFQTVLGL 712


>gi|329928727|ref|ZP_08282576.1| flagellar hook-associated protein FlgK [Paenibacillus sp. HGF5]
 gi|328937508|gb|EGG33926.1| flagellar hook-associated protein FlgK [Paenibacillus sp. HGF5]
          Length = 523

 Score = 42.6 bits (98), Expect = 0.020,   Method: Composition-based stats.
 Identities = 6/41 (14%), Positives = 19/41 (46%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           +   +V++  E +D+      Y A+ + +    +M+   ++
Sbjct: 476 LSISSVSLDEEMSDLIRFQHAYSASSRVVTTIDEMLDKLIN 516



 Score = 38.3 bits (87), Expect = 0.37,   Method: Composition-based stats.
 Identities = 19/106 (17%), Positives = 30/106 (28%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M        I   GL  Q A +     N+ NA T G +  +             +  S  
Sbjct: 1   MRSTFHLLEIGKRGLIAQQAALNTAGHNVTNANTPGYSRQTTRLVAANPIAFPGLQRSQA 60

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
                +GV+  +     D    +   +        +V  ET    E
Sbjct: 61  AGQLGMGVEAESIQRVRDFLLDIEYRNQNTNLSTWSVQQETLSNIE 106


>gi|213421609|ref|ZP_03354675.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Typhi str. E01-6750]
          Length = 147

 Score = 42.6 bits (98), Expect = 0.020,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 22/45 (48%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           +     +G ++  NV++  E  +M    R Y +N QTIK    ++
Sbjct: 103 NFGKLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQIL 147


>gi|76809667|ref|YP_331888.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           1710b]
 gi|167892419|ref|ZP_02479821.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           7894]
 gi|167909135|ref|ZP_02496226.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           112]
 gi|76579120|gb|ABA48595.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           1710b]
          Length = 667

 Score = 42.6 bits (98), Expect = 0.020,   Method: Composition-based stats.
 Identities = 21/132 (15%), Positives = 42/132 (31%), Gaps = 2/132 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             ++    ++ SG      +  I +    N              +   +    + G+   
Sbjct: 534 SGVMNGVSVSLSGTPADGDQFTIGANKGTNDGRNALALSQLVNSKTMNNGTTTLTGAYAG 593

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYP--NVNVLVETADMRETNRLYMANLQTIK 119
            V  IG   S           +       +     VN   E A++ +  +LY AN + I+
Sbjct: 594 YVNAIGNAASQLKASSAAQTALVGQITQAQQSVSGVNQNEEAANLMQYQQLYQANAKVIQ 653

Query: 120 QSHDMMTTTLDL 131
            ++ +  T L L
Sbjct: 654 TANSVFQTVLGL 665


>gi|315649834|ref|ZP_07902917.1| flagellar hook-associated protein FlgK [Paenibacillus vortex V453]
 gi|315274808|gb|EFU38189.1| flagellar hook-associated protein FlgK [Paenibacillus vortex V453]
          Length = 552

 Score = 42.6 bits (98), Expect = 0.020,   Method: Composition-based stats.
 Identities = 6/41 (14%), Positives = 19/41 (46%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           +   +V++  E +D+      Y A+ + +    +M+   ++
Sbjct: 476 LSISSVSLDEEMSDLIRFQHAYSASSRVVTTIDEMLDKLIN 516



 Score = 38.3 bits (87), Expect = 0.38,   Method: Composition-based stats.
 Identities = 20/106 (18%), Positives = 30/106 (28%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M        I   GL  Q A +     N+ NA T G +  +             M  S  
Sbjct: 1   MRSTFHLLEIGKRGLIAQQAAINTAGHNVTNANTPGYSRQTTRLVAANPIAFPGMQRSQA 60

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
                +GV+  +     D    +   +        +V  ET    E
Sbjct: 61  AGQLGMGVEADSIRRVRDFLLDIEYRNQNTNLSTWSVQQETLSNIE 106


>gi|309390123|gb|ADO78003.1| flagellar hook-associated protein FlgK [Halanaerobium praevalens
          DSM 2228]
          Length = 572

 Score = 42.6 bits (98), Expect = 0.020,   Method: Composition-based stats.
 Identities = 11/76 (14%), Positives = 23/76 (30%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M+ + +   +    L  Q   + +   NIANA           ++         +  +G 
Sbjct: 1  MNNIFSGLSVGLRALETQRKSLDVTGHNIANANNEKYNKQRAVHKASYPYTAPGLSNNGS 60

Query: 61 VRVKKIGVDQSTFVEE 76
                GV+ +     
Sbjct: 61 AGQMGTGVEIAQIERV 76



 Score = 39.1 bits (89), Expect = 0.22,   Method: Composition-based stats.
 Identities = 16/109 (14%), Positives = 39/109 (35%), Gaps = 2/109 (1%)

Query: 25  ISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVA 84
           IS N A          ++ +    +     + G     V  +G + S   +  +    V 
Sbjct: 463 ISLNKAIGNGENANALANLFNSGDVIEGASIEGYFRTIVTSVGAESSRSQQMKNNQDVVL 522

Query: 85  NASGIVKYP--NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
                +      V++  E A++ +  + Y A  + I ++  ++ T + +
Sbjct: 523 KQLNTLDKSVSGVSLDEEMANLIKYQQSYAAAAKYINKTDQLLETLMTI 571


>gi|260893854|ref|YP_003239951.1| fagellar hook-basal body protein [Ammonifex degensii KC4]
 gi|260865995|gb|ACX53101.1| fagellar hook-basal body protein [Ammonifex degensii KC4]
          Length = 260

 Score = 42.6 bits (98), Expect = 0.020,   Method: Composition-based stats.
 Identities = 13/38 (34%), Positives = 20/38 (52%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGS 41
          +I   +IA SGL +Q A + + + N+AN  T G     
Sbjct: 1  MIRGIYIAASGLNLQQALLDVTANNLANLSTPGFKQDR 38



 Score = 40.6 bits (93), Expect = 0.064,   Method: Composition-based stats.
 Identities = 9/52 (17%), Positives = 21/52 (40%)

Query: 79  PGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           P        G ++  NV++  E A +    R Y    + +K   +++   ++
Sbjct: 203 PAVGTLVRQGWLEAANVDLAGEMARLCTCLRAYQLASRALKTHDELLNRIIN 254


>gi|225849134|ref|YP_002729298.1| flagellar basal-body rod protein FlgF [Sulfurihydrogenibium
           azorense Az-Fu1]
 gi|225644137|gb|ACN99187.1| flagellar basal-body rod protein FlgF [Sulfurihydrogenibium
           azorense Az-Fu1]
          Length = 237

 Score = 42.6 bits (98), Expect = 0.020,   Method: Composition-based stats.
 Identities = 15/116 (12%), Positives = 37/116 (31%), Gaps = 11/116 (9%)

Query: 18  QSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEF 77
           Q  ++        N R    T G      + ++   V++      V         +  + 
Sbjct: 132 QRIKLDT------NGRVDITTKGEIYQNGRLVATLRVVNLQNLQPVG-----NGYYNGQE 180

Query: 78  DPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
                     G ++  NVN++ E  +M  ++R +   +   K    +     ++ +
Sbjct: 181 QATERYTLRQGFLEGSNVNIVKEMVEMINSHRRFDIYMNLAKSLDQLEGRLNEIGK 236


>gi|289548869|ref|YP_003473857.1| flagellar hook-associated protein FlgK [Thermocrinis albus DSM
           14484]
 gi|289182486|gb|ADC89730.1| flagellar hook-associated protein FlgK [Thermocrinis albus DSM
           14484]
          Length = 516

 Score = 42.6 bits (98), Expect = 0.020,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 22/41 (53%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +   V++  E  ++ +  R Y A  +T+    D++ TTL++
Sbjct: 475 ELQGVSIDQEFMEIMQLQRSYEALAKTVSAMDDLLRTTLNM 515


>gi|34498339|ref|NP_902554.1| flagellar basal-body rod protein flgF [Chromobacterium violaceum
           ATCC 12472]
 gi|34104193|gb|AAQ60552.1| flagellar basal-body rod protein flgF [Chromobacterium violaceum
           ATCC 12472]
          Length = 246

 Score = 42.6 bits (98), Expect = 0.020,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 17/43 (39%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           ++  NVN +     M    R Y  N++ ++ S         LL
Sbjct: 201 LESSNVNSVEALVQMISHGRQYELNIKMMQTSQQNDQQAAQLL 243


>gi|53717921|ref|YP_106907.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           K96243]
 gi|53724572|ref|YP_104805.1| flagellar hook-associated protein FlgK [Burkholderia mallei ATCC
           23344]
 gi|121601252|ref|YP_994298.1| flagellar hook-associated protein FlgK [Burkholderia mallei SAVP1]
 gi|124385698|ref|YP_001028053.1| flagellar hook-associated protein FlgK [Burkholderia mallei NCTC
           10229]
 gi|126448312|ref|YP_001082860.1| flagellar hook-associated protein FlgK [Burkholderia mallei NCTC
           10247]
 gi|126451511|ref|YP_001064571.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           1106a]
 gi|167717670|ref|ZP_02400906.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           DM98]
 gi|167736711|ref|ZP_02409485.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           14]
 gi|167813810|ref|ZP_02445490.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           91]
 gi|167822327|ref|ZP_02453798.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           9]
 gi|167843917|ref|ZP_02469425.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           B7210]
 gi|167900916|ref|ZP_02488121.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           NCTC 13177]
 gi|242314954|ref|ZP_04813970.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           1106b]
 gi|254174885|ref|ZP_04881546.1| flagellar hook-associated protein 1 [Burkholderia mallei ATCC
           10399]
 gi|254197004|ref|ZP_04903428.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           S13]
 gi|254359739|ref|ZP_04976010.1| flagellar hook-associated protein 1 [Burkholderia mallei
           2002721280]
 gi|52208335|emb|CAH34268.1| putative flagellar hook-associated protein [Burkholderia
           pseudomallei K96243]
 gi|52427995|gb|AAU48588.1| flagellar hook-associated protein 1 [Burkholderia mallei ATCC
           23344]
 gi|121230062|gb|ABM52580.1| flagellar hook-associated protein 1 [Burkholderia mallei SAVP1]
 gi|124293718|gb|ABN02987.1| flagellar hook-associated protein FlgK [Burkholderia mallei NCTC
           10229]
 gi|126225153|gb|ABN88693.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           1106a]
 gi|126241182|gb|ABO04275.1| flagellar hook-associated protein FlgK [Burkholderia mallei NCTC
           10247]
 gi|148028953|gb|EDK86885.1| flagellar hook-associated protein 1 [Burkholderia mallei
           2002721280]
 gi|160695930|gb|EDP85900.1| flagellar hook-associated protein 1 [Burkholderia mallei ATCC
           10399]
 gi|169653747|gb|EDS86440.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           S13]
 gi|242138193|gb|EES24595.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           1106b]
          Length = 667

 Score = 42.6 bits (98), Expect = 0.021,   Method: Composition-based stats.
 Identities = 21/132 (15%), Positives = 42/132 (31%), Gaps = 2/132 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             ++    ++ SG      +  I +    N              +   +    + G+   
Sbjct: 534 SGVMNGVSVSLSGTPADGDQFTIGANKGTNDGRNALALSQLVNSKTMNNGTTTLTGAYAG 593

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYP--NVNVLVETADMRETNRLYMANLQTIK 119
            V  IG   S           +       +     VN   E A++ +  +LY AN + I+
Sbjct: 594 YVNAIGNAASQLKASSAAQTALVGQITQAQQSVSGVNQNEEAANLMQYQQLYQANAKVIQ 653

Query: 120 QSHDMMTTTLDL 131
            ++ +  T L L
Sbjct: 654 TANSVFQTVLGL 665


>gi|255021361|ref|ZP_05293409.1| Flagellar hook-associated protein flgK [Acidithiobacillus caldus
          ATCC 51756]
 gi|254969224|gb|EET26738.1| Flagellar hook-associated protein flgK [Acidithiobacillus caldus
          ATCC 51756]
          Length = 684

 Score = 42.6 bits (98), Expect = 0.021,   Method: Composition-based stats.
 Identities = 19/73 (26%), Positives = 28/73 (38%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  +      A SGL V    +Q+   NIAN  T G +  S        +F    +   G
Sbjct: 1  MSGVSGILSSALSGLQVAQDALQVTGNNIANVNTPGYSQESVVQSSLPTTFLGGQYYGNG 60

Query: 61 VRVKKIGVDQSTF 73
           +V  +    S+F
Sbjct: 61 AQVSSVQRAYSSF 73


>gi|224825165|ref|ZP_03698271.1| flagellar basal-body rod protein FlgF [Lutiella nitroferrum 2002]
 gi|224602836|gb|EEG09013.1| flagellar basal-body rod protein FlgF [Lutiella nitroferrum 2002]
          Length = 246

 Score = 42.6 bits (98), Expect = 0.021,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 17/43 (39%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           ++  NVN +     M    R +  N++ ++ S         +L
Sbjct: 201 LEGSNVNAVESLVQMISHARQFDLNVKLMQTSDQNEQKASQIL 243


>gi|167917171|ref|ZP_02504262.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           BCC215]
          Length = 667

 Score = 42.6 bits (98), Expect = 0.021,   Method: Composition-based stats.
 Identities = 21/132 (15%), Positives = 42/132 (31%), Gaps = 2/132 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             ++    ++ SG      +  I +    N              +   +    + G+   
Sbjct: 534 SGVMNGVSVSLSGTPADGDQFTIGANKGTNDGRNALALSQLVNSKTMNNGTTTLTGAYAG 593

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYP--NVNVLVETADMRETNRLYMANLQTIK 119
            V  IG   S           +       +     VN   E A++ +  +LY AN + I+
Sbjct: 594 YVNAIGNAASQLKASSAAQTALVGQITQAQQSVSGVNQNEEAANLMQYQQLYQANAKVIQ 653

Query: 120 QSHDMMTTTLDL 131
            ++ +  T L L
Sbjct: 654 TANSVFQTVLGL 665


>gi|311033282|ref|ZP_07711372.1| hypothetical protein Bm3-1_22549 [Bacillus sp. m3-13]
          Length = 280

 Score = 42.6 bits (98), Expect = 0.021,   Method: Composition-based stats.
 Identities = 11/53 (20%), Positives = 23/53 (43%)

Query: 80  GHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
              +    G+++  NV++  E  +M    R Y  N ++++ +  MM     L 
Sbjct: 227 RQDIRMQQGMLEQSNVDLASEMTEMTLMQRSYQFNAKSVQFADQMMGLVNGLK 279


>gi|126652479|ref|ZP_01724651.1| flagellar hook-associated protein K [Bacillus sp. B14905]
 gi|126590750|gb|EAZ84865.1| flagellar hook-associated protein K [Bacillus sp. B14905]
          Length = 530

 Score = 42.6 bits (98), Expect = 0.021,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 18/42 (42%), Gaps = 1/42 (2%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD-LLR 133
             V++  E  +M    + Y AN + I    + +   ++ + R
Sbjct: 486 SAVSLDEEMTNMITFQQAYNANARMITVVDETLDKIINGMGR 527



 Score = 36.0 bits (81), Expect = 1.6,   Method: Composition-based stats.
 Identities = 20/112 (17%), Positives = 33/112 (29%), Gaps = 10/112 (8%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS-- 58
           M         +  GL VQ   +     NI+NA T G +      +         ++    
Sbjct: 1   MRSTFMGLEASKRGLFVQQTALYTTGHNISNANTLGYSRQRVNMQATPGFPTAGLNQPTY 60

Query: 59  -----GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
                 GV    I   +S F++         N  G       N + +  D+ 
Sbjct: 61  PGHLGTGVEASSIQRIRSEFIDR--QYRQETNKLGY-WESRTNAIAQMEDVM 109


>gi|167835119|ref|ZP_02462002.1| flagellar hook-associated protein FlgK [Burkholderia thailandensis
           MSMB43]
          Length = 667

 Score = 42.2 bits (97), Expect = 0.022,   Method: Composition-based stats.
 Identities = 21/132 (15%), Positives = 42/132 (31%), Gaps = 2/132 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             ++    ++ SG      +  I +    N              +   +    + G+   
Sbjct: 534 SGVMNGVSVSLSGTPADGDQFTIGANKGTNDGRNALALSQLVNSKTMNNGTATLTGAYAG 593

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYP--NVNVLVETADMRETNRLYMANLQTIK 119
            V  IG   S           +       +     VN   E A++ +  +LY AN + I+
Sbjct: 594 YVNAIGNAASQLKASSAAQTALVGQITQAQQSVSGVNQNEEAANLMQYQQLYQANAKVIQ 653

Query: 120 QSHDMMTTTLDL 131
            ++ +  T L L
Sbjct: 654 TANSVFQTVLGL 665


>gi|23100412|ref|NP_693879.1| flagellar basal-body rod protein [Oceanobacillus iheyensis HTE831]
 gi|22778645|dbj|BAC14913.1| flagellar basal-body rod protein [Oceanobacillus iheyensis HTE831]
          Length = 269

 Score = 42.2 bits (97), Expect = 0.022,   Method: Composition-based stats.
 Identities = 11/53 (20%), Positives = 24/53 (45%), Gaps = 1/53 (1%)

Query: 82  PVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD-LLR 133
             +   G ++  NVN +    DM    RL+  N + ++   + +  T++ + R
Sbjct: 215 TFSLQQGALEQSNVNTMQTMTDMMNAYRLFETNQRVLRAYDESLGKTVNEIGR 267



 Score = 38.3 bits (87), Expect = 0.32,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 24/62 (38%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++   + A SG+  Q  + + +S NIANA T G        R       +    S  +  
Sbjct: 1  MLRGLYTAASGMITQQRQQESLSNNIANANTPGYKADQTTIRAFPELLLQQTGSSSQIPT 60

Query: 64 KK 65
           +
Sbjct: 61 SQ 62


>gi|315636309|ref|ZP_07891559.1| flagellar hook protein FlgE [Arcobacter butzleri JV22]
 gi|315479398|gb|EFU70081.1| flagellar hook protein FlgE [Arcobacter butzleri JV22]
          Length = 583

 Score = 42.2 bits (97), Expect = 0.022,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 22/44 (50%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  NV+       +    R Y A+ ++I  S D + T +D+++
Sbjct: 540 LERSNVSYSSTLTSLMVYQRAYEASSKSITTSDDFLKTAIDMVK 583


>gi|206895941|ref|YP_002246669.1| flagellar hook-associated protein FlgK [Coprothermobacter
           proteolyticus DSM 5265]
 gi|206738558|gb|ACI17636.1| flagellar hook-associated protein FlgK [Coprothermobacter
           proteolyticus DSM 5265]
          Length = 540

 Score = 42.2 bits (97), Expect = 0.022,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 38/109 (34%), Gaps = 7/109 (6%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS-------FEEVMH 56
           +I S  IA   L  Q   + + S NIAN  T G +     +R                  
Sbjct: 1   MIWSLEIAKRSLQAQMLALDVTSHNIANVNTPGYSRQEAVFRPTQPYGIVSWLGTINPGQ 60

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
              GV++  I   ++ FV+         ++   VK    ++L  + +  
Sbjct: 61  VGTGVQISSIRRLRNDFVDMNYRNVTSESSYYSVKDQVFSILESSINEI 109



 Score = 35.2 bits (79), Expect = 3.0,   Method: Composition-based stats.
 Identities = 5/40 (12%), Positives = 16/40 (40%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
             VN+  E  ++    + Y  + + +     M+   +++ 
Sbjct: 499 SGVNLDEEAVNLIRFQKGYAMSARIVSVVDGMLDLIINMG 538


>gi|312135425|ref|YP_004002763.1| flagellar hook-associated protein flgk [Caldicellulosiruptor
           owensensis OL]
 gi|311775476|gb|ADQ04963.1| flagellar hook-associated protein FlgK [Caldicellulosiruptor
           owensensis OL]
          Length = 525

 Score = 42.2 bits (97), Expect = 0.022,   Method: Composition-based stats.
 Identities = 5/38 (13%), Positives = 17/38 (44%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             V++  E  ++ +    + A+ + I    +M+   ++
Sbjct: 481 SGVSIDEEMTNLIKYQHGFQASARMINAFDEMLDVIVN 518



 Score = 34.1 bits (76), Expect = 7.5,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 34/102 (33%), Gaps = 2/102 (1%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
                IA +G+ V    +++ S N+ANA T G T        K+      +         
Sbjct: 3   FYGLEIARTGIFVNRKGLEVTSHNVANASTPGYT--RQVLNVKSNPPSAKVGFYSPKFQV 60

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
            +G D  +  +  +    +   +   +     +  +  +  E
Sbjct: 61  GMGADVQSLEQIRNMFLDMQYRNEYSRQGEYEIKADNLNFIE 102


>gi|302871568|ref|YP_003840204.1| flagellar hook-associated protein FlgK [Caldicellulosiruptor
           obsidiansis OB47]
 gi|302574427|gb|ADL42218.1| flagellar hook-associated protein FlgK [Caldicellulosiruptor
           obsidiansis OB47]
          Length = 525

 Score = 42.2 bits (97), Expect = 0.022,   Method: Composition-based stats.
 Identities = 5/38 (13%), Positives = 17/38 (44%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             V++  E  ++ +    + A+ + I    +M+   ++
Sbjct: 481 SGVSIDEEMTNLIKYQHGFQASARMINAFDEMLDVIVN 518



 Score = 33.7 bits (75), Expect = 8.8,   Method: Composition-based stats.
 Identities = 17/102 (16%), Positives = 34/102 (33%), Gaps = 2/102 (1%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
                IA +G+ V    +++ S N+ANA T G T        K+      +         
Sbjct: 3   FYGLEIARTGIFVNRKGLEVTSHNVANASTPGYT--RQVLNVKSNPPSSKVGFYSPKFQV 60

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
            +G D  +  +  D    +   +   +     +  +  +  E
Sbjct: 61  GMGADVQSLEQIRDMFLDMQYRNEYSRQGEYEIKADNLNFIE 102


>gi|256833255|ref|YP_003161982.1| flagellar hook-associated protein FlgK [Jonesia denitrificans DSM
           20603]
 gi|256686786|gb|ACV09679.1| flagellar hook-associated protein FlgK [Jonesia denitrificans DSM
           20603]
          Length = 463

 Score = 42.2 bits (97), Expect = 0.022,   Method: Composition-based stats.
 Identities = 7/68 (10%), Positives = 20/68 (29%)

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
              +    +                  +   +V+   ET ++    R Y A  + +    
Sbjct: 389 ATGVAAKATADSATVAYAAQSTAEGLHIAATSVDTDEETVNLLSYQRAYQAAARVMTTVD 448

Query: 123 DMMTTTLD 130
           +M+   ++
Sbjct: 449 EMLDQLIN 456



 Score = 36.8 bits (83), Expect = 0.97,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 22/66 (33%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           +    A S L  Q A M+I  +NIAN  T G T         +      +   G     
Sbjct: 4  FSGLSTALSSLNAQRAAMEITGQNIANVNTPGYTRQRADMTPVSAGQTASLFSQGAKIGN 63

Query: 65 KIGVDQ 70
           + +  
Sbjct: 64 GVRITD 69


>gi|323341368|ref|ZP_08081612.1| flagellar distal rod protein [Lactobacillus ruminis ATCC 25644]
 gi|323091245|gb|EFZ33873.1| flagellar distal rod protein [Lactobacillus ruminis ATCC 25644]
          Length = 234

 Score = 42.2 bits (97), Expect = 0.022,   Method: Composition-based stats.
 Identities = 7/49 (14%), Positives = 23/49 (46%)

Query: 82  PVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
                 G+++  N +      D+ +T+R + AN + +  ++  ++  ++
Sbjct: 181 RSEVVQGMLEGSNTDTAQNMVDLIQTSREFEANQKVLSTANQTLSKAVN 229


>gi|284041497|ref|YP_003391837.1| fagellar hook-basal body protein [Conexibacter woesei DSM 14684]
 gi|283945718|gb|ADB48462.1| fagellar hook-basal body protein [Conexibacter woesei DSM 14684]
          Length = 232

 Score = 42.2 bits (97), Expect = 0.022,   Method: Composition-based stats.
 Identities = 9/49 (18%), Positives = 16/49 (32%)

Query: 80  GHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
                   G ++   ++      DM  + R Y A  + I    D +  T
Sbjct: 172 QATGQVEIGALEGSGIDPTRTMVDMIASFRAYEAGQKVITTIDDTLRRT 220



 Score = 41.8 bits (96), Expect = 0.036,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 18/42 (42%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          +    +IA SG+  +  R   I+ ++ANA T G         
Sbjct: 1  MERGLYIAASGMIAEQMRQDAIANDLANASTPGYKADRITQA 42


>gi|251778946|ref|ZP_04821866.1| flagellar hook-basal body complex protein FlhP [Clostridium
           botulinum E1 str. 'BoNT E Beluga']
 gi|243083261|gb|EES49151.1| flagellar hook-basal body complex protein FlhP [Clostridium
           botulinum E1 str. 'BoNT E Beluga']
          Length = 256

 Score = 42.2 bits (97), Expect = 0.022,   Method: Composition-based stats.
 Identities = 7/54 (12%), Positives = 21/54 (38%)

Query: 80  GHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            +      G+++  NV+      D+  T R +  + + I  + ++      + +
Sbjct: 203 SNDYNIEQGMLEGSNVDTSEIFTDIISTQRAFQLSSKGITTADEVWGMINSMRK 256


>gi|91794989|ref|YP_564640.1| flagellar hook-associated protein [Shewanella denitrificans OS217]
 gi|91716991|gb|ABE56917.1| Flagellar hook-associated protein [Shewanella denitrificans OS217]
          Length = 457

 Score = 42.2 bits (97), Expect = 0.022,   Method: Composition-based stats.
 Identities = 9/38 (23%), Positives = 16/38 (42%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             VN   E  ++    + Y AN + I  +  +  T L+
Sbjct: 418 SGVNPDEEGVNLIVYQQAYQANAKVITTAERLFQTVLN 455


>gi|4378857|gb|AAD19725.1| flagellar basal-body rod protein [Zymomonas mobilis subsp. mobilis
           ZM4]
          Length = 249

 Score = 42.2 bits (97), Expect = 0.023,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 20/43 (46%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           ++  NV       DM + +R Y  +++ +  +  +  ++  L+
Sbjct: 203 LENSNVEPTQALVDMIQASRSYEQSVKMVATARQLDESSTSLM 245


>gi|168705106|ref|ZP_02737383.1| flagellar basal-body rod protein FlgG [Gemmata obscuriglobus UQM
           2246]
          Length = 261

 Score = 42.2 bits (97), Expect = 0.023,   Method: Composition-based stats.
 Identities = 15/102 (14%), Positives = 30/102 (29%)

Query: 32  ARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVK 91
           A   G                  +  SG                  +     +  SG ++
Sbjct: 160 ALDNGTAQVIGQVTLTRFVNPGGLSRSGDNVYTATPAAGDAINGAPNTNGIGSVESGRLE 219

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             NV +  E  ++    + +  N Q ++    ++  T DL+R
Sbjct: 220 QSNVELANELVNLIVAQQAFRFNTQALQLESQVLQVTTDLIR 261



 Score = 38.3 bits (87), Expect = 0.36,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 21/42 (50%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          L ++   + SG+   S  + + S NIAN+ T G   G   ++
Sbjct: 2  LASAITSSASGIRAASTYLDVTSNNIANSDTPGYKTGQITFQ 43


>gi|205375363|ref|ZP_03228153.1| flagellar hook-basal body complex protein [Bacillus coahuilensis
           m4-4]
          Length = 279

 Score = 42.2 bits (97), Expect = 0.023,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 21/52 (40%)

Query: 80  GHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
              ++   G ++  NV++  E  DM    R Y    +TI  +  MM     +
Sbjct: 227 RAEISVKQGFIEKSNVDLSKELTDMINVQRSYQFQARTISMADQMMGLVNGI 278


>gi|254445805|ref|ZP_05059281.1| flagellar hook-associated protein FlgK [Verrucomicrobiae bacterium
           DG1235]
 gi|198260113|gb|EDY84421.1| flagellar hook-associated protein FlgK [Verrucomicrobiae bacterium
           DG1235]
          Length = 486

 Score = 42.2 bits (97), Expect = 0.023,   Method: Composition-based stats.
 Identities = 20/125 (16%), Positives = 39/125 (31%), Gaps = 11/125 (8%)

Query: 12  NSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQS 71
            S L   + R    S ++ +   T      D       +   + + + G   + I  D  
Sbjct: 364 ASDLTASTLRTSNASTDLGDNSLTLAIAELD-----DTNQAALGNRNFGTFYRSIVTDLG 418

Query: 72  TFVEEFDPGHPVAN------ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
             V   D      N               V++  E  DM +  R + A  + I+   +M+
Sbjct: 419 ENVAAVDSRLEDENIVFELLKQQQDAVSGVSIDEEMTDMMKFQRAFQATGKLIQTIDEML 478

Query: 126 TTTLD 130
              ++
Sbjct: 479 DVIVN 483


>gi|311031940|ref|ZP_07710030.1| flagellar hook-associated protein FlgK [Bacillus sp. m3-13]
          Length = 620

 Score = 42.2 bits (97), Expect = 0.023,   Method: Composition-based stats.
 Identities = 17/78 (21%), Positives = 27/78 (34%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M     S  +A  GL  Q   +Q +  NIANA T G T     + +        ++    
Sbjct: 1  MRSTFHSLEVARRGLVTQQTALQTVGHNIANANTPGYTRQRVNFVQTEPYPAPSLNRPQI 60

Query: 61 VRVKKIGVDQSTFVEEFD 78
                GV+  +     +
Sbjct: 61 PGQIGTGVEAGSIQRVRE 78



 Score = 40.2 bits (92), Expect = 0.084,   Method: Composition-based stats.
 Identities = 6/38 (15%), Positives = 17/38 (44%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             V++  E   M +    Y A+ + I  + +++   ++
Sbjct: 576 SGVSLDEEMTSMIQYQHAYNASARMITLTDELLDKIIN 613


>gi|121535557|ref|ZP_01667365.1| flagellar hook-associated protein FlgK [Thermosinus carboxydivorans
           Nor1]
 gi|121305885|gb|EAX46819.1| flagellar hook-associated protein FlgK [Thermosinus carboxydivorans
           Nor1]
          Length = 494

 Score = 42.2 bits (97), Expect = 0.023,   Method: Composition-based stats.
 Identities = 18/128 (14%), Positives = 41/128 (32%), Gaps = 5/128 (3%)

Query: 5   IASAHIANSGLAVQS--ARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
             S+ I ++ L        M + S + A A +      + P      + +   +   G  
Sbjct: 363 FTSSTIVDTALIAARSDVAMGVASGDHAVALSNLLKTVTSP-TLDNATLDSYYNAFIGKL 421

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
             +    +     +      + N    V    VN+  E  +M    + Y A  + +    
Sbjct: 422 GVQSQDAKRLAENQKTLVSQIRNWRESV--AGVNMDEEMTNMIRYQQGYNAAARVVTAID 479

Query: 123 DMMTTTLD 130
           +M+   ++
Sbjct: 480 EMLDKLIN 487


>gi|220917708|ref|YP_002493012.1| flagellar hook-associated protein FlgK [Anaeromyxobacter
           dehalogenans 2CP-1]
 gi|219955562|gb|ACL65946.1| flagellar hook-associated protein FlgK [Anaeromyxobacter
           dehalogenans 2CP-1]
          Length = 469

 Score = 42.2 bits (97), Expect = 0.024,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 19/40 (47%)

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
              V+V  E  +M +  R Y A  + I+ S +M  T L L
Sbjct: 429 ASGVSVDEELLEMEKAQRAYDAISKVIQASSEMFDTLLKL 468


>gi|163784307|ref|ZP_02179217.1| flagellar hook basal-body protein FlgG [Hydrogenivirga sp.
           128-5-R1-1]
 gi|159880425|gb|EDP74019.1| flagellar hook basal-body protein FlgG [Hydrogenivirga sp.
           128-5-R1-1]
          Length = 238

 Score = 42.2 bits (97), Expect = 0.024,   Method: Composition-based stats.
 Identities = 7/60 (11%), Positives = 18/60 (30%)

Query: 74  VEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
                         G ++  NVN +    ++    R        +K    +   ++++ R
Sbjct: 178 PSSSQTNASYEIHQGFLENSNVNPIKAMTELINAQRRMEMYGNLMKALDSVEQKSIEIGR 237


>gi|157694039|ref|YP_001488501.1| flagellar hook-basal body protein [Bacillus pumilus SAFR-032]
 gi|194016453|ref|ZP_03055067.1| flagellar hook-basal body complex protein FlhP [Bacillus pumilus
           ATCC 7061]
 gi|157682797|gb|ABV63941.1| flagellar hook-basal body protein [Bacillus pumilus SAFR-032]
 gi|194011926|gb|EDW21494.1| flagellar hook-basal body complex protein FlhP [Bacillus pumilus
           ATCC 7061]
          Length = 272

 Score = 42.2 bits (97), Expect = 0.024,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 21/52 (40%)

Query: 80  GHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
              +    G ++  NV++  E  D+  T R Y  N +TI     M+     +
Sbjct: 220 RQAIQLQQGALETSNVDMSKELTDLMTTQRSYQMNSRTITMGDQMLGLVNTI 271


>gi|257876010|ref|ZP_05655663.1| flagellar basal-body rod protein flgG [Enterococcus casseliflavus
           EC20]
 gi|257810176|gb|EEV38996.1| flagellar basal-body rod protein flgG [Enterococcus casseliflavus
           EC20]
          Length = 260

 Score = 42.2 bits (97), Expect = 0.024,   Method: Composition-based stats.
 Identities = 11/58 (18%), Positives = 26/58 (44%)

Query: 69  DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           DQ+    + +P    +   G ++   V++     D+  T R Y  N + ++ + +M +
Sbjct: 196 DQALLTSQTNPAAFGSVLQGQLEQSTVDLATSMTDLLTTQRAYGLNTKAMQTADEMWS 253



 Score = 34.1 bits (76), Expect = 6.6,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 17/45 (37%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR 46
            +     I+ SGL      +   + NIAN  T G    +  ++ 
Sbjct: 1  MNISGLLGISRSGLNHLQTNLDTTANNIANVNTNGYQAQTTHFQA 45


>gi|304397205|ref|ZP_07379084.1| flagellar basal-body rod protein FlgF [Pantoea sp. aB]
 gi|304355354|gb|EFM19722.1| flagellar basal-body rod protein FlgF [Pantoea sp. aB]
          Length = 251

 Score = 42.2 bits (97), Expect = 0.024,   Method: Composition-based stats.
 Identities = 14/102 (13%), Positives = 31/102 (30%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           NA  + +        +   +  + +  S     +     Q+T          +    G++
Sbjct: 147 NAGDSPNATVQLGKLKLVRATGQELQRSDDGMFRPTASTQATRGAALQADPTMQVMPGVL 206

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NV  +    DM    R +   ++ I    +       LL
Sbjct: 207 EGSNVKPVETMVDMIANARRFEMQMKVITNVDENEQKANQLL 248


>gi|23092316|gb|AAN08641.1| FlgF [Aeromonas hydrophila]
          Length = 248

 Score = 42.2 bits (97), Expect = 0.024,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 21/44 (47%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  NVNV+ E  ++    R +   ++ +K + +       LLR
Sbjct: 203 LEGSNVNVVDEMTNLIRLQRQFETQVKIMKTAEENDEAQTQLLR 246


>gi|312622116|ref|YP_004023729.1| flagellar hook-associated protein flgk [Caldicellulosiruptor
           kronotskyensis 2002]
 gi|312202583|gb|ADQ45910.1| flagellar hook-associated protein FlgK [Caldicellulosiruptor
           kronotskyensis 2002]
          Length = 525

 Score = 42.2 bits (97), Expect = 0.024,   Method: Composition-based stats.
 Identities = 5/38 (13%), Positives = 16/38 (42%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             V++  E  ++      + A+ + I    +M+   ++
Sbjct: 481 SGVSIDEEMTNLIRYQHGFQASARMINAFDEMLDVIVN 518


>gi|167579496|ref|ZP_02372370.1| flagellar hook-associated protein FlgK [Burkholderia thailandensis
           TXDOH]
          Length = 667

 Score = 42.2 bits (97), Expect = 0.024,   Method: Composition-based stats.
 Identities = 21/132 (15%), Positives = 42/132 (31%), Gaps = 2/132 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             ++    ++ SG      +  I +    N              +   +    + G+   
Sbjct: 534 SGVMNGVSVSLSGTPADGDQFTIGANKGTNDGRNALALSQLVNSKTMNNGTTTLTGAYAG 593

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYP--NVNVLVETADMRETNRLYMANLQTIK 119
            V  IG   S           +       +     VN   E A++ +  +LY AN + I+
Sbjct: 594 YVNAIGNAASQLKASSAAQTALVGQITQAQQSVSGVNQNEEAANLMQYQQLYQANAKVIQ 653

Query: 120 QSHDMMTTTLDL 131
            ++ +  T L L
Sbjct: 654 TANSVFQTVLGL 665


>gi|161367438|ref|YP_868965.2| flagellar basal body rod protein FlgF [Shewanella sp. ANA-3]
          Length = 247

 Score = 42.2 bits (97), Expect = 0.024,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 23/48 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            SG V+  NVN + E   + +  R +   ++ +K + +    +  L+R
Sbjct: 198 ESGAVEGSNVNPVDEMVSLIDLQRQFELQVKMMKTAEENDRASSSLMR 245


>gi|56551506|ref|YP_162345.1| flagellar basal-body rod protein FlgF [Zymomonas mobilis subsp.
           mobilis ZM4]
 gi|241761150|ref|ZP_04759239.1| flagellar basal-body rod protein FlgF [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
 gi|260752887|ref|YP_003225780.1| flagellar basal-body rod protein FlgF [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
 gi|56543080|gb|AAV89234.1| flagellar basal-body rod protein FlgF [Zymomonas mobilis subsp.
           mobilis ZM4]
 gi|241374769|gb|EER64230.1| flagellar basal-body rod protein FlgF [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
 gi|258552250|gb|ACV75196.1| flagellar basal-body rod protein FlgF [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
          Length = 249

 Score = 42.2 bits (97), Expect = 0.024,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 20/43 (46%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           ++  NV       DM + +R Y  +++ +  +  +  ++  L+
Sbjct: 203 LENSNVEPTQALVDMIQASRSYEQSVKMVATARQLDESSTSLM 245


>gi|87119675|ref|ZP_01075572.1| hypothetical protein MED121_07040 [Marinomonas sp. MED121]
 gi|86165151|gb|EAQ66419.1| hypothetical protein MED121_07040 [Marinomonas sp. MED121]
          Length = 247

 Score = 42.2 bits (97), Expect = 0.024,   Method: Composition-based stats.
 Identities = 9/52 (17%), Positives = 23/52 (44%)

Query: 82  PVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             A  SG ++  NV+ + E   +   +R +  N++ +    +    +  +L+
Sbjct: 193 TAALKSGFLESSNVSAVEELTKIMSLSRQFEMNIKVMDTVRNNGNASARILQ 244


>gi|119775444|ref|YP_928184.1| flagellar hook-associated protein [Shewanella amazonensis SB2B]
 gi|119767944|gb|ABM00515.1| flagellar hook-associated protein [Shewanella amazonensis SB2B]
          Length = 638

 Score = 42.2 bits (97), Expect = 0.024,   Method: Composition-based stats.
 Identities = 17/101 (16%), Positives = 31/101 (30%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           I   +IA +G+    A++ + S NIAN  T G                       G  V 
Sbjct: 3   IDLLNIARTGVLASQAQLGVTSNNIANVNTEGYNRQVATQATHLSQRSGNSFYGTGTYVS 62

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
            +    + +          A  +  V +  ++ L +     
Sbjct: 63  SVKRVYNEYAARELRIGQTAKGAAEVSHTKMSELDQLFSQI 103


>gi|302387772|ref|YP_003823594.1| fagellar hook-basal body protein [Clostridium saccharolyticum WM1]
 gi|302198400|gb|ADL05971.1| fagellar hook-basal body protein [Clostridium saccharolyticum WM1]
          Length = 256

 Score = 42.2 bits (97), Expect = 0.025,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 27/77 (35%), Gaps = 5/77 (6%)

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
            S G  V  +       +   +           ++   V+   E   M E  R Y   L+
Sbjct: 185 ESQGDNVFSVTEKNGEPILLENAKVVKRA----LEESGVDFAQEMTRMIEAQRAYSYALK 240

Query: 117 TIKQSHDMMTTTLDLLR 133
            ++ S + +  T++ LR
Sbjct: 241 MVQTSDE-VEATINTLR 256



 Score = 33.7 bits (75), Expect = 7.7,   Method: Composition-based stats.
 Identities = 16/87 (18%), Positives = 25/87 (28%), Gaps = 1/87 (1%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR-RKTISFEEVMHGSGGVR 62
          +  S +I   G   Q  ++ I+S N+AN  T G       +              +G   
Sbjct: 1  MEQSFYIGALGALGQQTKLGIVSNNVANVNTVGFKAQYSVFSDLVHAEMRNTQGNNGAKS 60

Query: 63 VKKIGVDQSTFVEEFDPGHPVANASGI 89
               VDQ+       P          
Sbjct: 61 GSGTKVDQTKTDFSAMPYKETGLEHDY 87


>gi|161349955|ref|YP_733400.2| flagellar basal body rod protein FlgF [Shewanella sp. MR-4]
 gi|161367434|ref|YP_737389.2| flagellar basal body rod protein FlgF [Shewanella sp. MR-7]
          Length = 247

 Score = 42.2 bits (97), Expect = 0.025,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 23/48 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            SG V+  NVN + E   + +  R +   ++ +K + +    +  L+R
Sbjct: 198 ESGAVEGSNVNPVDEMVSLIDLQRQFELQVKMMKTAEENDRASSSLMR 245


>gi|311992327|gb|ADQ26737.1| proximal rod protein [Aeromonas hydrophila]
          Length = 247

 Score = 42.2 bits (97), Expect = 0.025,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 21/44 (47%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  NVNV+ E  ++    R +   ++ +K + +       LLR
Sbjct: 202 LEGSNVNVVDEMTNLIRLQRQFETQVKIMKTAEENDEAQTQLLR 245


>gi|304310886|ref|YP_003810484.1| Flagellar basal body rod protein [gamma proteobacterium HdN1]
 gi|301796619|emb|CBL44831.1| Flagellar basal body rod protein [gamma proteobacterium HdN1]
          Length = 245

 Score = 42.2 bits (97), Expect = 0.025,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 28/58 (48%)

Query: 76  EFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           E +    VA A+G+++  NVN + E   +  ++RL   N++ +    +       +L+
Sbjct: 187 EPEASAEVALANGMLESSNVNPVSELTSVITSSRLMELNVKMLATYKENDQVAARILQ 244


>gi|257866397|ref|ZP_05646050.1| flagellar basal-body rod protein flgG [Enterococcus casseliflavus
           EC30]
 gi|257873087|ref|ZP_05652740.1| flagellar basal-body rod protein flgG [Enterococcus casseliflavus
           EC10]
 gi|257800355|gb|EEV29383.1| flagellar basal-body rod protein flgG [Enterococcus casseliflavus
           EC30]
 gi|257807251|gb|EEV36073.1| flagellar basal-body rod protein flgG [Enterococcus casseliflavus
           EC10]
          Length = 260

 Score = 42.2 bits (97), Expect = 0.025,   Method: Composition-based stats.
 Identities = 11/58 (18%), Positives = 26/58 (44%)

Query: 69  DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           DQ+    + +P    +   G ++   V++     D+  T R Y  N + ++ + +M +
Sbjct: 196 DQALLTSQTNPAAFGSVLQGQLEQSTVDLATSMTDLLTTQRAYGLNTKAMQTADEMWS 253



 Score = 34.1 bits (76), Expect = 6.9,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 17/45 (37%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR 46
            +     I+ SGL      +   + NIAN  T G    +  ++ 
Sbjct: 1  MNISGLLGISRSGLNHLQTNLDTTANNIANVNTNGYQAQTTHFQA 45


>gi|83594174|ref|YP_427926.1| hypothetical protein Rru_A2842 [Rhodospirillum rubrum ATCC 11170]
 gi|83577088|gb|ABC23639.1| conserved hypothetical protein [Rhodospirillum rubrum ATCC 11170]
          Length = 245

 Score = 42.2 bits (97), Expect = 0.025,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 24/49 (48%)

Query: 75  EEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
           ++ +P        G+++  NVN +VE   M +  R Y A  + I+  +D
Sbjct: 184 QQANPITEPRIEQGMIEKSNVNPVVEMTRMIQVQRSYEAANKLIESEND 232


>gi|114562343|ref|YP_749856.1| flagellar basal body rod protein FlgF [Shewanella frigidimarina
           NCIMB 400]
 gi|114333636|gb|ABI71018.1| flagellar basal-body rod protein FlgF [Shewanella frigidimarina
           NCIMB 400]
          Length = 247

 Score = 42.2 bits (97), Expect = 0.025,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 24/50 (48%)

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
              SG V+  NVN + E   M +  R Y   ++ +K + ++   +  L+R
Sbjct: 196 QVESGAVEGSNVNSVHEMVAMIDIQRQYEMQVKMMKNAEEIDRASTSLMR 245


>gi|327480026|gb|AEA83336.1| flagellar hook-associated protein FlgK [Pseudomonas stutzeri DSM
           4166]
          Length = 685

 Score = 42.2 bits (97), Expect = 0.025,   Method: Composition-based stats.
 Identities = 17/99 (17%), Positives = 29/99 (29%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +     I  SGLA    ++ I   NI N  T G +        ++  F    +   G  +
Sbjct: 1   MADLLSIGLSGLAASKTQLSITGHNITNVNTPGYSRQDATQATRSPQFSGAGYIGSGTTL 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETA 102
             +    S F+          N         ++ L    
Sbjct: 61  VDVRRTYSEFLTSQLRSSTSLNRDVEAYKSQIDQLDSLL 99


>gi|227820855|ref|YP_002824825.1| flagellar basal body rod protein FlgB [Sinorhizobium fredii NGR234]
 gi|227339854|gb|ACP24072.1| putative flagellar basal-body rod protein FlgB [Sinorhizobium
           fredii NGR234]
          Length = 126

 Score = 42.2 bits (97), Expect = 0.025,   Method: Composition-based stats.
 Identities = 26/132 (19%), Positives = 42/132 (31%), Gaps = 9/132 (6%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD +     +A+      + R  +++ NIANA T           +    FE V+  +G 
Sbjct: 1   MDPI-QLFELASRQAQWLTVRQNVVAGNIANANTPH------YRAKDVQPFESVLQNTGV 53

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPN--VNVLVETADMRETNRLYMANLQTI 118
                     +   +              V+     V +  E     E  R Y  N   +
Sbjct: 54  QMAATHRAHFTESPDAAQVTDVGMIDDVAVQQSGNTVALEQEMMKTGEIKRDYELNSGLV 113

Query: 119 KQSHDMMTTTLD 130
           K  H MM  T+ 
Sbjct: 114 KSFHRMMLMTVR 125


>gi|114320058|ref|YP_741741.1| flagellar basal-body rod protein FlgF [Alkalilimnicola ehrlichii
           MLHE-1]
 gi|114226452|gb|ABI56251.1| flagellar basal-body rod protein FlgF [Alkalilimnicola ehrlichii
           MLHE-1]
          Length = 246

 Score = 42.2 bits (97), Expect = 0.025,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 21/45 (46%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
            +  NVN++     M +  R +   ++ +  + +   T+  LLR+
Sbjct: 201 YEGSNVNMVDALVKMIDHARQFETYVKMMTAAEENDQTSAQLLRN 245


>gi|83717394|ref|YP_438390.1| flagellar basal-body rod protein FlgF [Burkholderia thailandensis
           E264]
 gi|167614838|ref|ZP_02383473.1| flagellar basal-body rod protein FlgF [Burkholderia thailandensis
           Bt4]
 gi|257141423|ref|ZP_05589685.1| flagellar basal-body rod protein FlgF [Burkholderia thailandensis
           E264]
 gi|83651219|gb|ABC35283.1| flagellar basal-body rod protein FlgF [Burkholderia thailandensis
           E264]
          Length = 241

 Score = 42.2 bits (97), Expect = 0.025,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 20/46 (43%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  NV+ + E       NR +   ++    + +M  T   L+R
Sbjct: 195 GHLERSNVSPVEEMIATMSLNRAFEVQMRMFNAAGEMADTGNRLIR 240


>gi|54307271|ref|YP_128291.1| FlgF flagellar basal-body rod protein [Photobacterium profundum
           SS9]
 gi|46911691|emb|CAG18489.1| Hypothetical FlgF flagellar basal-body rod protein [Photobacterium
           profundum SS9]
          Length = 244

 Score = 42.2 bits (97), Expect = 0.025,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 23/47 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG ++  NVN +    +    +R +   ++ +K + D+ +    L+R
Sbjct: 196 SGYIETSNVNAVESMINNMSLSRNFEFQIKMMKTAEDLASAGNRLVR 242


>gi|153951647|ref|YP_001398768.1| flagellar hook-associated protein FlgK [Campylobacter jejuni subsp.
           doylei 269.97]
 gi|152939093|gb|ABS43834.1| putative flagellar hook-associated protein FlgK [Campylobacter
           jejuni subsp. doylei 269.97]
          Length = 608

 Score = 42.2 bits (97), Expect = 0.025,   Method: Composition-based stats.
 Identities = 18/109 (16%), Positives = 28/109 (25%), Gaps = 2/109 (1%)

Query: 26  SENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVAN 85
             ++AN          + Y          M         KI  D             + N
Sbjct: 499 GNDMANKIIQLQYEKVNFYNEDGTIDNLTMEEYYRKLTGKIASDGENNNVVNSSNETLYN 558

Query: 86  A--SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  S       VN   E   + +    Y A  + +     M+ T L L 
Sbjct: 559 SVYSEYQSKSGVNTNEELVALIQYQSSYGAAAKIVSTVDQMLDTLLGLK 607



 Score = 34.5 bits (77), Expect = 4.6,   Method: Composition-based stats.
 Identities = 10/72 (13%), Positives = 21/72 (29%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            +  + +   +GL     ++     NI+NA  T  T                +    G 
Sbjct: 1  MGIFGTLYTGVTGLKASEVQIATTGNNISNANATFYTRQRVVQTTNGYITTGGVQVGTGT 60

Query: 62 RVKKIGVDQSTF 73
           ++ I      +
Sbjct: 61 AIESIVRLHDEY 72


>gi|188589304|ref|YP_001920228.1| flagellar basal body rod protein FlgG [Clostridium botulinum E3
           str. Alaska E43]
 gi|188499585|gb|ACD52721.1| flagellar hook-basal body complex protein FlhP [Clostridium
           botulinum E3 str. Alaska E43]
          Length = 256

 Score = 42.2 bits (97), Expect = 0.026,   Method: Composition-based stats.
 Identities = 7/54 (12%), Positives = 21/54 (38%)

Query: 80  GHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            +      G+++  NV+      D+  T R +  + + I  + ++      + +
Sbjct: 203 SNDYNIEQGMLEGSNVDTAEIFTDIISTQRAFQLSSKGITTADEVWGMINGMRK 256


>gi|167576663|ref|ZP_02369537.1| flagellar basal-body rod protein FlgF [Burkholderia thailandensis
           TXDOH]
          Length = 241

 Score = 42.2 bits (97), Expect = 0.026,   Method: Composition-based stats.
 Identities = 11/54 (20%), Positives = 22/54 (40%)

Query: 80  GHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            + V    G ++  NV+ + E       NR +   ++    + +M  T   L+R
Sbjct: 187 SNEVKVLGGHLERSNVSPVEEMIATMSLNRAFEVQMRMFNAAGEMADTGNRLIR 240


>gi|86153287|ref|ZP_01071491.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni HB93-13]
 gi|85843013|gb|EAQ60224.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni HB93-13]
          Length = 270

 Score = 42.2 bits (97), Expect = 0.026,   Method: Composition-based stats.
 Identities = 12/84 (14%), Positives = 25/84 (29%), Gaps = 1/84 (1%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
            +   +V       +               D  +  A   G  +  NVN + E   + E 
Sbjct: 181 RLFVAQVDDIRALQKDGDNVYKIDDLTRIRDLKNSNAIRQGFSQGSNVNPVTEMVGLIEA 240

Query: 108 NRLYMANLQTIKQS-HDMMTTTLD 130
           NR+     + +     D+    ++
Sbjct: 241 NRMVEMYQKVMTAHMDDLNQEAIN 264


>gi|121997313|ref|YP_001002100.1| flagellar hook-associated protein FlgK [Halorhodospira halophila
           SL1]
 gi|121588718|gb|ABM61298.1| flagellar hook-associated protein FlgK [Halorhodospira halophila
           SL1]
          Length = 685

 Score = 42.2 bits (97), Expect = 0.026,   Method: Composition-based stats.
 Identities = 17/102 (16%), Positives = 30/102 (29%), Gaps = 7/102 (6%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           ++       SGL      +   S NI+N  T G       Y R+ +  +  +        
Sbjct: 1   MVDILQTGISGLRASQRGLATTSHNISNVNTDG-------YSRQRVEQDTSIPHYHSRGA 53

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
              G    T     +     A  +   +Y  ++ L E     
Sbjct: 54  IGTGTQVQTIQRLSEDHRVDALRNNHAEYERLDRLAEMTGRI 95


>gi|46202499|ref|ZP_00053126.2| COG1749: Flagellar hook protein FlgE [Magnetospirillum
           magnetotacticum MS-1]
          Length = 354

 Score = 42.2 bits (97), Expect = 0.026,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 19/42 (45%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           ++  NV +  + + M  T + Y  N    K + +M  T  DL
Sbjct: 311 LEASNVALEDQFSKMIVTQKAYSTNANVFKTADEMTQTVRDL 352


>gi|117612105|gb|ABK47559.1| flagellar basal-body rod protein FlgF [Shewanella sp. ANA-3]
          Length = 252

 Score = 42.2 bits (97), Expect = 0.027,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 23/48 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            SG V+  NVN + E   + +  R +   ++ +K + +    +  L+R
Sbjct: 203 ESGAVEGSNVNPVDEMVSLIDLQRQFELQVKMMKTAEENDRASSSLMR 250


>gi|113884291|gb|ABI38343.1| flagellar basal-body rod protein FlgF [Shewanella sp. MR-4]
 gi|113888281|gb|ABI42332.1| flagellar basal-body rod protein FlgF [Shewanella sp. MR-7]
          Length = 252

 Score = 42.2 bits (97), Expect = 0.027,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 23/48 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            SG V+  NVN + E   + +  R +   ++ +K + +    +  L+R
Sbjct: 203 ESGAVEGSNVNPVDEMVSLIDLQRQFELQVKMMKTAEENDRASSSLMR 250


>gi|315121850|ref|YP_004062339.1| flagellar basal body rod protein FlgB [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313495252|gb|ADR51851.1| flagellar basal body rod protein FlgB [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 183

 Score = 42.2 bits (97), Expect = 0.027,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 41/126 (32%), Gaps = 1/126 (0%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M  +     IA+      S R +++SENIANA T G            ++    M  +  
Sbjct: 54  MQPIT-FFEIASQHANWLSERQKVVSENIANASTPGYRSKDISAFETVLNDNIAMARTHE 112

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
             +K +  D                    V    V +  E         LY  N + +K+
Sbjct: 113 AHLKAMDFDGFYRHVRTIQAPLYQPIGVQVSGNTVGITNELYKAGNIKHLYELNTRLVKK 172

Query: 121 SHDMMT 126
            + MM 
Sbjct: 173 LNYMMM 178


>gi|144900942|emb|CAM77806.1| flagellar hook protein FlgE precursor [Magnetospirillum
          gryphiswaldense MSR-1]
          Length = 430

 Score = 42.2 bits (97), Expect = 0.027,   Method: Composition-based stats.
 Identities = 14/71 (19%), Positives = 30/71 (42%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            L+ + + A + L  QS  + IIS+N++N+ TTG    +  ++            + G 
Sbjct: 1  MSLMGAMNSAVTALKAQSTALSIISDNLSNSSTTGYKANTTSFKTLVTQSYSSTSYASGG 60

Query: 62 RVKKIGVDQST 72
              +  + + 
Sbjct: 61 VTASVRQNVAA 71



 Score = 38.3 bits (87), Expect = 0.40,   Method: Composition-based stats.
 Identities = 10/54 (18%), Positives = 16/54 (29%)

Query: 76  EFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
           E             ++   V+   E   M    + Y A  Q I  + DM    +
Sbjct: 373 EAGEDGVATITPSALESSTVDTSDEFTRMIVAQQAYSAASQVISTASDMFDDLM 426


>gi|323490137|ref|ZP_08095357.1| flagellar hook-basal body protein [Planococcus donghaensis MPA1U2]
 gi|323396185|gb|EGA89011.1| flagellar hook-basal body protein [Planococcus donghaensis MPA1U2]
          Length = 280

 Score = 42.2 bits (97), Expect = 0.027,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 21/47 (44%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
               ++  NV++  E  ++  T RL+ +  + I  + DMM     + 
Sbjct: 233 KQNFLEMSNVDLSDEMTELITTQRLFQSQGRAISYADDMMGLVNTIK 279


>gi|311070150|ref|YP_003975073.1| flagellar basal body rod protein FlgG [Bacillus atrophaeus 1942]
 gi|310870667|gb|ADP34142.1| flagellar basal body rod protein FlgG [Bacillus atrophaeus 1942]
          Length = 274

 Score = 42.2 bits (97), Expect = 0.027,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 19/41 (46%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
             G ++  NV++  +  D+  + R Y  N +TI     M+ 
Sbjct: 228 QQGALEMSNVDISKQMTDLISSQRSYQLNSRTITMGDQMLG 268


>gi|121612923|ref|YP_001000393.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni 81-176]
 gi|167005336|ref|ZP_02271094.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni 81-176]
 gi|87249505|gb|EAQ72465.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni 81-176]
          Length = 270

 Score = 42.2 bits (97), Expect = 0.028,   Method: Composition-based stats.
 Identities = 12/84 (14%), Positives = 25/84 (29%), Gaps = 1/84 (1%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
            +   +V       +               D  +  A   G  +  NVN + E   + E 
Sbjct: 181 RLFVAQVDDIRALQKDGDNVYKIDDLTRIRDLENSNAIRQGFSQGSNVNPVTEMVGLIEA 240

Query: 108 NRLYMANLQTIKQS-HDMMTTTLD 130
           NR+     + +     D+    ++
Sbjct: 241 NRMVEMYQKVMTAHMDDLNQEAIN 264


>gi|150388562|ref|YP_001318611.1| flagellar hook-associated protein FlgK [Alkaliphilus
          metalliredigens QYMF]
 gi|149948424|gb|ABR46952.1| flagellar hook-associated protein FlgK [Alkaliphilus
          metalliredigens QYMF]
          Length = 493

 Score = 42.2 bits (97), Expect = 0.028,   Method: Composition-based stats.
 Identities = 19/91 (20%), Positives = 29/91 (31%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M    +  + A SG+      + ++  NIANA T G +         T        G  G
Sbjct: 1  MRSTFSGFNTATSGIFASQRSLDVVGHNIANANTPGYSRQRLEQAASTPMSLYGGKGMLG 60

Query: 61 VRVKKIGVDQSTFVEEFDPGHPVANASGIVK 91
            V  + + Q              NA G  +
Sbjct: 61 TGVDTVAIKQMRSEFLDFKYRDEVNALGYWE 91



 Score = 37.5 bits (85), Expect = 0.65,   Method: Composition-based stats.
 Identities = 7/38 (18%), Positives = 17/38 (44%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             V++  E A+M      Y A+ + +    +M+   ++
Sbjct: 449 SGVSLDEEMANMVRFQHAYNASARMVTTMDEMIDVIIN 486


>gi|325289234|ref|YP_004265415.1| flagellar hook-associated protein FlgK [Syntrophobotulus glycolicus
           DSM 8271]
 gi|324964635|gb|ADY55414.1| flagellar hook-associated protein FlgK [Syntrophobotulus glycolicus
           DSM 8271]
          Length = 507

 Score = 42.2 bits (97), Expect = 0.028,   Method: Composition-based stats.
 Identities = 19/103 (18%), Positives = 35/103 (33%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M    A    A SGL+V  +++     NI+NA T G           +           G
Sbjct: 1   MGSSFAGIATATSGLSVSQSQLNTTGHNISNADTAGYVRQQVVQTDASYLKSGQYQVGTG 60

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETAD 103
            R++ I   +S F++          +   ++   V  +    +
Sbjct: 61  TRIETIRQIRSVFLDRMYRNEQSTLSYWQIRSSTVESIEAAMN 103



 Score = 36.4 bits (82), Expect = 1.3,   Method: Composition-based stats.
 Identities = 6/39 (15%), Positives = 17/39 (43%)

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
              V++  E A++ +    Y A+ + +     M+   ++
Sbjct: 462 LSAVSMDEELANLLKYQHAYNASARVMSMIDGMLGRLIE 500


>gi|308186394|ref|YP_003930525.1| Flagellar basal-body rod protein flgF [Pantoea vagans C9-1]
 gi|308056904|gb|ADO09076.1| Flagellar basal-body rod protein flgF [Pantoea vagans C9-1]
          Length = 251

 Score = 42.2 bits (97), Expect = 0.028,   Method: Composition-based stats.
 Identities = 14/102 (13%), Positives = 31/102 (30%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           NA  + +        +   +  + +  S     +     Q+T          +    G++
Sbjct: 147 NAGDSPNATVQLGKLKLVRATGQELQRSDDGMFRPTASTQATRGAALQADATMQVMPGVL 206

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NV  +    DM    R +   ++ I    +       LL
Sbjct: 207 EGSNVKPVETMVDMIANARRFEMQMKVITNVDENEQKANQLL 248


>gi|289208115|ref|YP_003460181.1| flagellar basal-body rod protein FlgF [Thioalkalivibrio sp. K90mix]
 gi|288943746|gb|ADC71445.1| flagellar basal-body rod protein FlgF [Thioalkalivibrio sp. K90mix]
          Length = 246

 Score = 42.2 bits (97), Expect = 0.028,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 27/57 (47%)

Query: 76  EFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           E  P   V   SG+++  NVN +     M E +R +   ++ +  ++ +  ++  LL
Sbjct: 187 EAPPDAEVRVVSGMLEGSNVNTVEALTRMIELSRHFEMQVKMMDSANTLEQSSNRLL 243


>gi|254460299|ref|ZP_05073715.1| flagellar proximal rod protein FlgF [Rhodobacterales bacterium
           HTCC2083]
 gi|206676888|gb|EDZ41375.1| flagellar proximal rod protein FlgF [Rhodobacteraceae bacterium
           HTCC2083]
          Length = 253

 Score = 42.2 bits (97), Expect = 0.028,   Method: Composition-based stats.
 Identities = 11/64 (17%), Positives = 26/64 (40%)

Query: 70  QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
            S      +P      + G ++  NVN +       E+ R +  +++ I  + ++   T 
Sbjct: 187 PSNGDPLPEPDQRARISQGFLESSNVNTITALVKNIESQRKFEMSVKFISLAQEIDEGTS 246

Query: 130 DLLR 133
            ++R
Sbjct: 247 RIMR 250


>gi|145298492|ref|YP_001141333.1| flagellar basal body rod protein FlgF [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|142851264|gb|ABO89585.1| flagellar basal body rod protein FlgF [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 248

 Score = 42.2 bits (97), Expect = 0.028,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 21/44 (47%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  NVNV+ E  ++    R +   ++ +K + +       LLR
Sbjct: 203 LEGSNVNVVDEMTNLIRLQRQFETQVKIMKTAEENDEAQTQLLR 246


>gi|83646789|ref|YP_435224.1| flagellar basal body rod protein [Hahella chejuensis KCTC 2396]
 gi|83634832|gb|ABC30799.1| Flagellar basal body rod protein [Hahella chejuensis KCTC 2396]
          Length = 235

 Score = 42.2 bits (97), Expect = 0.028,   Method: Composition-based stats.
 Identities = 14/110 (12%), Positives = 30/110 (27%)

Query: 21  RMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPG 80
           R   I+ N A+     D                       +     G+ ++   +     
Sbjct: 121 RSGPIALNDADFVVQPDGSVVQDGVVLDKLAVVTFQHPEQLSYAGAGLFENPTKQAPTEA 180

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
                    ++  NVN + E   + E  R Y  +   +K     + + + 
Sbjct: 181 TGAQVMQSYLEMSNVNTMEEIVRLVELTRHYQLSHNVLKAYDGSIDSAIS 230


>gi|83720978|ref|YP_440808.1| flagellar hook-associated protein FlgK [Burkholderia thailandensis
           E264]
 gi|167617593|ref|ZP_02386224.1| flagellar hook-associated protein FlgK [Burkholderia thailandensis
           Bt4]
 gi|257140541|ref|ZP_05588803.1| flagellar hook-associated protein FlgK [Burkholderia thailandensis
           E264]
 gi|83654803|gb|ABC38866.1| flagellar hook-associated protein 1 [Burkholderia thailandensis
           E264]
          Length = 667

 Score = 42.2 bits (97), Expect = 0.028,   Method: Composition-based stats.
 Identities = 21/132 (15%), Positives = 42/132 (31%), Gaps = 2/132 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             ++    ++ SG      +  I +    N              +   +    + G+   
Sbjct: 534 SGVMNGVSVSLSGTPADGDQFTIGANKGTNDGRNALALSQLVNSKTMNNGTTTLTGAYAG 593

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYP--NVNVLVETADMRETNRLYMANLQTIK 119
            V  IG   S           +       +     VN   E A++ +  +LY AN + I+
Sbjct: 594 YVNAIGNAASQLKASSAAQTALVGQITQAQQSVSGVNQNEEAANLMQYQQLYQANAKVIQ 653

Query: 120 QSHDMMTTTLDL 131
            ++ +  T L L
Sbjct: 654 TANSVFQTVLGL 665


>gi|303240172|ref|ZP_07326692.1| flagellar hook-associated protein FlgK [Acetivibrio
          cellulolyticus CD2]
 gi|302592263|gb|EFL61991.1| flagellar hook-associated protein FlgK [Acetivibrio
          cellulolyticus CD2]
          Length = 689

 Score = 41.8 bits (96), Expect = 0.028,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 24/68 (35%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M    AS  IA SG+ V    + +   NIAN  T G            +  E       G
Sbjct: 1  MSVGFASFEIARSGMTVNERALSVTGHNIANVNTAGYVRQQAIISSGPMQNENTYQLGLG 60

Query: 61 VRVKKIGV 68
            +++I  
Sbjct: 61 ADIEQIRQ 68



 Score = 37.5 bits (85), Expect = 0.65,   Method: Composition-based stats.
 Identities = 22/129 (17%), Positives = 43/129 (33%), Gaps = 8/129 (6%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
           D L +  +I  S           I+  IAN R T               ++ ++   G  
Sbjct: 562 DNLSSLNNIVASESGASG--DNTIALAIANIRGTDCLQDLKGILSTDDYYQSIILSVGNG 619

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
             +  G+ +S             +  G      V++  E ++M +    Y A+ + I   
Sbjct: 620 GSEAEGITESQQKLVDSANSQRQSIMG------VSMDEEMSNMMKYKFAYSASSRAISIV 673

Query: 122 HDMMTTTLD 130
            +M+ T + 
Sbjct: 674 DEMLDTIIS 682


>gi|313895889|ref|ZP_07829443.1| fagellar hook-basal body protein [Selenomonas sp. oral taxon 137
          str. F0430]
 gi|312975314|gb|EFR40775.1| fagellar hook-basal body protein [Selenomonas sp. oral taxon 137
          str. F0430]
          Length = 274

 Score = 41.8 bits (96), Expect = 0.028,   Method: Composition-based stats.
 Identities = 15/41 (36%), Positives = 19/41 (46%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          ++ S     SGL     RM +I  NIAN  TTG   G   +
Sbjct: 1  MMRSMFSGVSGLKSHQTRMDVIGNNIANVNTTGFKAGRVTF 41


>gi|171321214|ref|ZP_02910184.1| protein of unknown function DUF1078 domain protein [Burkholderia
           ambifaria MEX-5]
 gi|171093524|gb|EDT38694.1| protein of unknown function DUF1078 domain protein [Burkholderia
           ambifaria MEX-5]
          Length = 234

 Score = 41.8 bits (96), Expect = 0.028,   Method: Composition-based stats.
 Identities = 12/97 (12%), Positives = 27/97 (27%), Gaps = 13/97 (13%)

Query: 47  KTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANA-------------SGIVKYP 93
           +  +   V+       V ++    +    +       A                G V+  
Sbjct: 133 RVDADGTVLDHGVPTSVIRVATFDAPSRLQRIADGLYAPRDTVGMRDAPTRLAQGFVETS 192

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           NV+   +   + E  R      + +    D+M + L 
Sbjct: 193 NVSAADDMVRLIEAMRRVETGQKLVHAYDDLMGSVLQ 229


>gi|269836594|ref|YP_003318822.1| flagellar hook-associated protein FlgK [Sphaerobacter thermophilus
           DSM 20745]
 gi|269785857|gb|ACZ38000.1| flagellar hook-associated protein FlgK [Sphaerobacter thermophilus
           DSM 20745]
          Length = 471

 Score = 41.8 bits (96), Expect = 0.029,   Method: Composition-based stats.
 Identities = 6/60 (10%), Positives = 19/60 (31%)

Query: 71  STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           +            A      +   V++  E  ++ +    Y A  + +    +M+   ++
Sbjct: 405 AEADRVNQESLTRAIDRRRQEVAGVSLDEEAVNLIKYQHAYQAAARAMTVVDEMLDKLIN 464


>gi|224825778|ref|ZP_03698882.1| flagellar basal-body rod protein FlgF [Lutiella nitroferrum 2002]
 gi|224602002|gb|EEG08181.1| flagellar basal-body rod protein FlgF [Lutiella nitroferrum 2002]
          Length = 241

 Score = 41.8 bits (96), Expect = 0.029,   Method: Composition-based stats.
 Identities = 9/48 (18%), Positives = 20/48 (41%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
               ++  NV+ + E       NR +   ++    ++DM+     L+R
Sbjct: 193 QGEHLEQSNVSAVEEMIATMSLNRGFEMQMKMFNAANDMVEAGNRLVR 240


>gi|82702459|ref|YP_412025.1| flagellar hook-associated protein FlgK [Nitrosospira multiformis
           ATCC 25196]
 gi|82410524|gb|ABB74633.1| conserved hypothetical protein [Nitrosospira multiformis ATCC
           25196]
          Length = 638

 Score = 41.8 bits (96), Expect = 0.029,   Method: Composition-based stats.
 Identities = 14/83 (16%), Positives = 30/83 (36%), Gaps = 2/83 (2%)

Query: 53  EVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP--NVNVLVETADMRETNRL 110
               G+ G  V  +G               +   +  ++     VN+  E A++    + 
Sbjct: 556 ASYRGAYGQLVSLMGNKTRELEVTAGAQAALLTQTRALQQSEAGVNLDEEAANLLRYQQA 615

Query: 111 YMANLQTIKQSHDMMTTTLDLLR 133
           Y A  + I+ ++ M    L++ R
Sbjct: 616 YQAASKVIQTANQMFDALLEITR 638


>gi|146296674|ref|YP_001180445.1| flagellar hook-associated protein FlgK [Caldicellulosiruptor
           saccharolyticus DSM 8903]
 gi|145410250|gb|ABP67254.1| flagellar hook-associated protein FlgK [Caldicellulosiruptor
           saccharolyticus DSM 8903]
          Length = 525

 Score = 41.8 bits (96), Expect = 0.029,   Method: Composition-based stats.
 Identities = 5/38 (13%), Positives = 17/38 (44%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             V++  E  ++ +    + A+ + I    +M+   ++
Sbjct: 481 SGVSIDEEMTNLIKYQHGFQASARMINAFDEMLDVIVN 518



 Score = 34.8 bits (78), Expect = 3.7,   Method: Composition-based stats.
 Identities = 18/103 (17%), Positives = 36/103 (34%), Gaps = 2/103 (1%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
                IA +G+ V    +++ S N+ANA T G T      +    S    ++        
Sbjct: 3   FYGLEIARTGIYVNRKGLEVTSHNVANASTPGYTRQVLNVKSIPPSNRVGIYDPKFQ--V 60

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
            +G D  + V+  D    +   +   +     +  +  +  E 
Sbjct: 61  GMGADVQSLVQIRDMFLDMQYRNEYSRQGEYEIKADNLNFIEA 103


>gi|332187894|ref|ZP_08389627.1| flagellar hook-basal body s family protein [Sphingomonas sp. S17]
 gi|332012055|gb|EGI54127.1| flagellar hook-basal body s family protein [Sphingomonas sp. S17]
          Length = 251

 Score = 41.8 bits (96), Expect = 0.029,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 22/48 (45%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            SG ++  NVN+     DM E  R Y      +K++  M   +  L+R
Sbjct: 201 QSGALEGSNVNMAQTLVDMIENQRSYEVQANLMKEAKSMDENSASLMR 248



 Score = 34.1 bits (76), Expect = 6.2,   Method: Composition-based stats.
 Identities = 18/107 (16%), Positives = 34/107 (31%), Gaps = 6/107 (5%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD L+   + A +G+    A    I+ N+ANA T G       + R  +        +  
Sbjct: 1   MDKLV---YTAATGMRSHMAAQSAIANNMANASTIGFRADRVVFDRIDLKGGGAAFEARM 57

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
              +++              H        +   +  + V+  D  E 
Sbjct: 58  PTAEEVTDADRAPGTV---QHTGNPLDVAIATSSAWLAVQAPDGSEA 101


>gi|315125985|ref|YP_004067988.1| FlgFL [Pseudoalteromonas sp. SM9913]
 gi|315014499|gb|ADT67837.1| FlgFL [Pseudoalteromonas sp. SM9913]
          Length = 243

 Score = 41.8 bits (96), Expect = 0.029,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 23/46 (50%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            +G ++  NVN + E       +R +  N++ +K + ++ T+   L
Sbjct: 193 RTGALEGSNVNAVAEMIKTMNISRQFEMNVKMMKSADELATSGNKL 238


>gi|283956106|ref|ZP_06373593.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni 1336]
 gi|283792426|gb|EFC31208.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni 1336]
          Length = 270

 Score = 41.8 bits (96), Expect = 0.029,   Method: Composition-based stats.
 Identities = 13/98 (13%), Positives = 28/98 (28%), Gaps = 1/98 (1%)

Query: 34  TTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
               +   D  +   +   +V       +               D  +  A   G  +  
Sbjct: 167 DKNGSIEVDGVQNARLFVAQVDDIRALQKDGDNVYKIDDLTRIRDLENSNAIRQGFSQGS 226

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQS-HDMMTTTLD 130
           NVN + E   + E NR+     + +     D+    ++
Sbjct: 227 NVNPVTEMVGLIEANRMVEMYQKVMTAHMDDLNQEAIN 264


>gi|154687759|ref|YP_001422920.1| FlhO [Bacillus amyloliquefaciens FZB42]
 gi|154353610|gb|ABS75689.1| FlhO [Bacillus amyloliquefaciens FZB42]
          Length = 265

 Score = 41.8 bits (96), Expect = 0.029,   Method: Composition-based stats.
 Identities = 18/103 (17%), Positives = 34/103 (33%), Gaps = 2/103 (1%)

Query: 33  RTTGDTPGSDPYRRKTISFEEVMH-GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVK 91
             T  T G    +      E+V +    G  +              +P    +   G+ +
Sbjct: 162 NGTVTTNGRPAGQIDIRMEEDVRNLKRDGNDLYSTADGSELPSAAANPQVSYSLKQGVSE 221

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSH-DMMTTTLDLLR 133
             NV+V     +M E  R + AN + I+     M     ++ +
Sbjct: 222 LSNVDVTSTYTEMTEAYRSFEANQKVIQAYDKSMDKAANEIGK 264



 Score = 36.8 bits (83), Expect = 1.1,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 26/63 (41%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++   + A S +  Q  R +++S NIANA T+G        R         + G    ++
Sbjct: 1  MLKGLYTATSAMITQQRRTEMLSNNIANANTSGYKEDQGSIRAFPEMLLSRIEGDKKTKI 60

Query: 64 KKI 66
            +
Sbjct: 61 GSV 63


>gi|315929130|gb|EFV08357.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
           305]
          Length = 270

 Score = 41.8 bits (96), Expect = 0.030,   Method: Composition-based stats.
 Identities = 13/98 (13%), Positives = 28/98 (28%), Gaps = 1/98 (1%)

Query: 34  TTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
               +   D  +   +   +V       +               D  +  A   G  +  
Sbjct: 167 DKNGSIEVDGAQNARLFVAQVDDIRALQKDGDNVYKIDDLTRIRDLKNSNAIRQGFSQGS 226

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQS-HDMMTTTLD 130
           NVN + E   + E NR+     + +     D+    ++
Sbjct: 227 NVNPVTEMVGLIEANRMVEMYQKVMTAHMDDLNQEAIN 264


>gi|315657526|ref|ZP_07910408.1| flagellar hook-associated protein FlgK [Mobiluncus curtisii subsp.
           holmesii ATCC 35242]
 gi|315491998|gb|EFU81607.1| flagellar hook-associated protein FlgK [Mobiluncus curtisii subsp.
           holmesii ATCC 35242]
          Length = 688

 Score = 41.8 bits (96), Expect = 0.030,   Method: Composition-based stats.
 Identities = 5/41 (12%), Positives = 18/41 (43%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            +V++  E  ++ +    Y    + +   + M+   +++ R
Sbjct: 648 SSVDMNEEVINLIQGQHAYAGAARIMSTVNSMLEALINIGR 688


>gi|212637791|ref|YP_002314316.1| flagellar hook-associated protein [Shewanella piezotolerans WP3]
 gi|212559275|gb|ACJ31729.1| Flagellar hook-associated protein, putative [Shewanella
           piezotolerans WP3]
          Length = 457

 Score = 41.8 bits (96), Expect = 0.030,   Method: Composition-based stats.
 Identities = 9/38 (23%), Positives = 17/38 (44%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             VN+  E  ++    + Y AN + I  +  +  T L+
Sbjct: 418 SGVNMDEEGTNLIIYQQSYQANAKVISTADQLFQTILN 455



 Score = 34.5 bits (77), Expect = 5.0,   Method: Composition-based stats.
 Identities = 16/96 (16%), Positives = 28/96 (29%), Gaps = 3/96 (3%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           ++  +I  SGL    A +   S N+ANA   G +         +     V     GV V 
Sbjct: 1   MSMLNIGMSGLNASMAALNATSNNVANAMVPGYSRQQV---MMSSVGNGVYGSGAGVMVD 57

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVE 100
            +      +                V+      + +
Sbjct: 58  GVRRISDQYEVAQLWNTTSNLGFAKVQSSYFGQVEQ 93


>gi|90423517|ref|YP_531887.1| hypothetical protein RPC_2013 [Rhodopseudomonas palustris BisB18]
 gi|90105531|gb|ABD87568.1| protein of unknown function DUF1078-like [Rhodopseudomonas
           palustris BisB18]
          Length = 464

 Score = 41.8 bits (96), Expect = 0.030,   Method: Composition-based stats.
 Identities = 11/53 (20%), Positives = 26/53 (49%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +      G ++  N +V  + + +  T + Y AN++ +  ++ MM   L+ +R
Sbjct: 412 NGGTIVGGNIEGSNSDVAGQFSKLVATQQAYSANVKVMTTANQMMADLLNAVR 464



 Score = 36.8 bits (83), Expect = 1.1,   Method: Composition-based stats.
 Identities = 16/44 (36%), Positives = 22/44 (50%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
            + A+ + A SG+A QS  +  IS NIANA T G       + 
Sbjct: 1  MSITAAINTAISGMAAQSYAIGNISGNIANAHTPGFKRIDTSFA 44


>gi|94312675|ref|YP_585884.1| flagellar hook-filament junction protein [Cupriavidus metallidurans
           CH34]
 gi|93356527|gb|ABF10615.1| flagellar hook-filament junction protein [Cupriavidus metallidurans
           CH34]
          Length = 631

 Score = 41.8 bits (96), Expect = 0.030,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 42/109 (38%), Gaps = 2/109 (1%)

Query: 26  SENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVAN 85
           S + A A        +     KTI+     + +    V ++G D  +     +    +  
Sbjct: 523 SNSGATADNGNALALAKLQTAKTINGTSSFNDAYASLVNQVGSDAKSASIASESQDSITT 582

Query: 86  ASGIVKYP--NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
                +     VN+  ET ++ +  +LY AN + I+ +  ++ T L + 
Sbjct: 583 QVTSAQQSVSGVNMDEETVNLLKFQQLYQANAKVIQTASTIIDTLLSIG 631


>gi|325567512|ref|ZP_08144179.1| hypothetical protein HMPREF9087_0468 [Enterococcus casseliflavus
           ATCC 12755]
 gi|325158945|gb|EGC71091.1| hypothetical protein HMPREF9087_0468 [Enterococcus casseliflavus
           ATCC 12755]
          Length = 260

 Score = 41.8 bits (96), Expect = 0.031,   Method: Composition-based stats.
 Identities = 11/58 (18%), Positives = 26/58 (44%)

Query: 69  DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           DQ+    + +P    +   G ++   V++     D+  T R Y  N + ++ + +M +
Sbjct: 196 DQALLTSQTNPAAFGSVLQGQLEQSTVDLATSMTDLLTTQRAYGLNTKAMQTADEMWS 253



 Score = 33.7 bits (75), Expect = 8.1,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 17/45 (37%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR 46
            +     I+ SGL      +   + NIAN  T G    +  ++ 
Sbjct: 1  MNISGLLGISRSGLNHLQTNLDTTANNIANVNTNGYQAQTTHFQA 45


>gi|308050371|ref|YP_003913937.1| flagellar basal-body rod protein FlgF [Ferrimonas balearica DSM
           9799]
 gi|307632561|gb|ADN76863.1| flagellar basal-body rod protein FlgF [Ferrimonas balearica DSM
           9799]
          Length = 245

 Score = 41.8 bits (96), Expect = 0.031,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 20/44 (45%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           V+  NVN + E   M E  R +   L+ +K + +       L+R
Sbjct: 202 VEGSNVNPVNELVGMIEAQRQFDMQLKLMKTAEENDRAHAQLMR 245


>gi|304390261|ref|ZP_07372215.1| flagellar hook-associated protein FlgK [Mobiluncus curtisii subsp.
           curtisii ATCC 35241]
 gi|304326743|gb|EFL93987.1| flagellar hook-associated protein FlgK [Mobiluncus curtisii subsp.
           curtisii ATCC 35241]
          Length = 687

 Score = 41.8 bits (96), Expect = 0.031,   Method: Composition-based stats.
 Identities = 5/41 (12%), Positives = 18/41 (43%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            +V++  E  ++ +    Y    + +   + M+   +++ R
Sbjct: 647 SSVDMNEEVINLIQGQHAYAGAARIMSTVNSMLEALINIGR 687


>gi|114570496|ref|YP_757176.1| flagellar basal body rod protein [Maricaulis maris MCS10]
 gi|114340958|gb|ABI66238.1| flagellar basal body rod protein [Maricaulis maris MCS10]
          Length = 249

 Score = 41.8 bits (96), Expect = 0.031,   Method: Composition-based stats.
 Identities = 22/125 (17%), Positives = 38/125 (30%), Gaps = 12/125 (9%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVD 69
           I  S  +VQ     +I +N                R            S     +     
Sbjct: 135 IDASAGSVQIVEGGMIMQN-----------DQQIGRIGVFEIANRSEMSKQGNGRYTIPP 183

Query: 70  QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
                 E         + G V+  NV  ++E  DM    R Y +  + ++Q+ D+    +
Sbjct: 184 IEDPANEPLAMIDATVSQGFVEQSNVQSILELTDMMSVMRSYQSVSKFLEQAEDLSKRAI 243

Query: 130 D-LLR 133
           + L R
Sbjct: 244 ERLGR 248


>gi|74317646|ref|YP_315386.1| flagellar hook-associated protein FlgK [Thiobacillus denitrificans
           ATCC 25259]
 gi|74057141|gb|AAZ97581.1| Flagellar hook-associated protein [Thiobacillus denitrificans ATCC
           25259]
          Length = 629

 Score = 41.8 bits (96), Expect = 0.031,   Method: Composition-based stats.
 Identities = 12/81 (14%), Positives = 27/81 (33%), Gaps = 2/81 (2%)

Query: 55  MHGSGGVRVKKIGVDQSTFVEEFDPGH--PVANASGIVKYPNVNVLVETADMRETNRLYM 112
             G+    V +IG                   + + +     VN+  E  ++    + Y 
Sbjct: 549 YQGAYSQFVSQIGNKTRELEVTSSAAGKLLSESTTALQNESGVNLDEEATNLLRYQQAYQ 608

Query: 113 ANLQTIKQSHDMMTTTLDLLR 133
           A  + ++ + +M    L + R
Sbjct: 609 AAAKVMQVASEMFDALLTIGR 629



 Score = 38.7 bits (88), Expect = 0.28,   Method: Composition-based stats.
 Identities = 14/98 (14%), Positives = 28/98 (28%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
            +   I  S LA   A +     NIANA T G +                     G +++
Sbjct: 3   TSILGIGQSALAAAQAGLSTTGHNIANASTPGYSRQVVVQGAALPQNFGFGFMGQGTQIE 62

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETA 102
            +    + ++         + +     Y  +  +    
Sbjct: 63  TVKRVYNEYLGVQVQTAQASKSGLDSYYAQIKQIDNLL 100


>gi|311070151|ref|YP_003975074.1| flagellar basal-body rod protein [Bacillus atrophaeus 1942]
 gi|310870668|gb|ADP34143.1| flagellar basal-body rod protein [Bacillus atrophaeus 1942]
          Length = 271

 Score = 41.8 bits (96), Expect = 0.031,   Method: Composition-based stats.
 Identities = 18/103 (17%), Positives = 34/103 (33%), Gaps = 2/103 (1%)

Query: 33  RTTGDTPGSDPYRRKTISFEEVMH-GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVK 91
             T  T G    +      E+V +    G  +              +P    +   G+ +
Sbjct: 168 NGTVTTNGRTAGQIDIRMEEDVRNLKRDGNDLYSTADGNDLPSAAGNPEVSYSLKQGLSE 227

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSH-DMMTTTLDLLR 133
             NV+V     +M E  R + AN + I+     M     ++ +
Sbjct: 228 LSNVDVTSAYTEMTEAYRTFEANQKVIQAYDKSMDKAANEIGK 270



 Score = 36.0 bits (81), Expect = 1.9,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 24/62 (38%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++   + A S +  Q  R +++S NIANA T+G        R         +       V
Sbjct: 1  MLKGLYTATSAMISQQRRTEMLSNNIANANTSGYKEDQGSMRAFPDMLLSRIEAKSPGGV 60

Query: 64 KK 65
           K
Sbjct: 61 SK 62


>gi|298345981|ref|YP_003718668.1| flagellar hook-associated protein FlgK [Mobiluncus curtisii ATCC
           43063]
 gi|298236042|gb|ADI67174.1| flagellar hook-associated protein FlgK [Mobiluncus curtisii ATCC
           43063]
          Length = 687

 Score = 41.8 bits (96), Expect = 0.031,   Method: Composition-based stats.
 Identities = 5/41 (12%), Positives = 18/41 (43%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            +V++  E  ++ +    Y    + +   + M+   +++ R
Sbjct: 647 SSVDMNEEVINLIQGQHAYAGAARIMSTVNSMLEALINIGR 687


>gi|153001471|ref|YP_001367152.1| flagellar basal body rod protein FlgF [Shewanella baltica OS185]
 gi|160876202|ref|YP_001555518.1| flagellar basal body rod protein FlgF [Shewanella baltica OS195]
 gi|151366089|gb|ABS09089.1| flagellar basal-body rod protein FlgF [Shewanella baltica OS185]
 gi|160861724|gb|ABX50258.1| flagellar basal-body rod protein FlgF [Shewanella baltica OS195]
 gi|315268392|gb|ADT95245.1| flagellar basal-body rod protein FlgF [Shewanella baltica OS678]
          Length = 247

 Score = 41.8 bits (96), Expect = 0.031,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 23/48 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            SG V+  NVN + E   + +  R +   ++ +K + +    +  L+R
Sbjct: 198 ESGAVEGSNVNPVDEMVSLIDLQRQFELQVKMMKTAEENDRASSSLMR 245


>gi|330830302|ref|YP_004393254.1| flagellar basal-body rod protein FlgF [Aeromonas veronii B565]
 gi|328805438|gb|AEB50637.1| Flagellar basal-body rod protein FlgF [Aeromonas veronii B565]
          Length = 248

 Score = 41.8 bits (96), Expect = 0.031,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 21/44 (47%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  NVNV+ E  ++    R +   ++ +K + +       LLR
Sbjct: 203 LEGSNVNVVDEMTNLIRLQRQFETQVKIMKTAEENDEAQTQLLR 246


>gi|117619148|ref|YP_857342.1| flagellar basal-body rod protein FlgF [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|117560555|gb|ABK37503.1| flagellar basal-body rod protein FlgF [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
          Length = 248

 Score = 41.8 bits (96), Expect = 0.031,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 21/44 (47%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  NVNV+ E  ++    R +   ++ +K + +       LLR
Sbjct: 203 LEGSNVNVVDEMTNLIRLQRQFETQVKIMKTAEENDEAQTQLLR 246


>gi|307265481|ref|ZP_07547036.1| flagellar hook-associated protein FlgK [Thermoanaerobacter wiegelii
           Rt8.B1]
 gi|306919435|gb|EFN49654.1| flagellar hook-associated protein FlgK [Thermoanaerobacter wiegelii
           Rt8.B1]
          Length = 480

 Score = 41.8 bits (96), Expect = 0.031,   Method: Composition-based stats.
 Identities = 7/38 (18%), Positives = 19/38 (50%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             V++  E  +M +  + Y A+ + I    +++ T ++
Sbjct: 436 SGVSLDEEMTNMIKYQKSYAASARVITAMDELLDTLIN 473



 Score = 36.0 bits (81), Expect = 2.0,   Method: Composition-based stats.
 Identities = 15/87 (17%), Positives = 28/87 (32%), Gaps = 1/87 (1%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDP-YRRKTISFEEVMHGSGGVRV 63
               IA +GL V    + +   NIANA TTG T            +   +    G    
Sbjct: 4  FQGLEIAKTGLFVSQKALDVTGHNIANANTTGYTRQVVDMASIAPPTTFGMYDQWGKAIG 63

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIV 90
          + + +     + +    +     +  +
Sbjct: 64 EGVKIQDIRQIRDQFLDNQYRRENKFL 90


>gi|296283227|ref|ZP_06861225.1| flagellar basal-body rod protein FlgF [Citromicrobium bathyomarinum
           JL354]
          Length = 248

 Score = 41.8 bits (96), Expect = 0.031,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 1/64 (1%)

Query: 71  STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           +       P       SG V+  NV  +VET  M +  R Y  +++  +  +DM    LD
Sbjct: 183 AGAEGRVLPAEETKLRSGGVEGSNVQPIVETTAMIDILRSYQNSVRMTESLNDMRKRALD 242

Query: 131 -LLR 133
            L R
Sbjct: 243 RLGR 246


>gi|217972599|ref|YP_002357350.1| flagellar basal body rod protein FlgF [Shewanella baltica OS223]
 gi|217497734|gb|ACK45927.1| flagellar basal-body rod protein FlgF [Shewanella baltica OS223]
          Length = 247

 Score = 41.8 bits (96), Expect = 0.031,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 23/48 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            SG V+  NVN + E   + +  R +   ++ +K + +    +  L+R
Sbjct: 198 ESGAVEGSNVNPVDEMVSLIDLQRQFELQVKMMKTAEENDRASSSLMR 245


>gi|224370761|ref|YP_002604925.1| FlgF [Desulfobacterium autotrophicum HRM2]
 gi|223693478|gb|ACN16761.1| FlgF [Desulfobacterium autotrophicum HRM2]
          Length = 226

 Score = 41.8 bits (96), Expect = 0.032,   Method: Composition-based stats.
 Identities = 5/41 (12%), Positives = 19/41 (46%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           ++  +V  + E  +M + +R+Y    + +    ++    ++
Sbjct: 180 LELSSVKAVEEMVNMIDHHRMYETFQKMMMTFDEVDDKAIN 220


>gi|306813302|ref|ZP_07447495.1| flagellar basal body rod protein FlgF [Escherichia coli NC101]
 gi|305854065|gb|EFM54504.1| flagellar basal body rod protein FlgF [Escherichia coli NC101]
          Length = 245

 Score = 41.8 bits (96), Expect = 0.032,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 23/48 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           + G ++  NV+ + E       NR + A ++ +K + D+      LLR
Sbjct: 196 SGGFLEGSNVSAVSEMMSSIAMNRQFEAQIKMMKTAEDISDAGNRLLR 243


>gi|163744348|ref|ZP_02151708.1| hypothetical protein OIHEL45_02155 [Oceanibulbus indolifex HEL-45]
 gi|161381166|gb|EDQ05575.1| hypothetical protein OIHEL45_02155 [Oceanibulbus indolifex HEL-45]
          Length = 247

 Score = 41.8 bits (96), Expect = 0.032,   Method: Composition-based stats.
 Identities = 17/99 (17%), Positives = 31/99 (31%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           N    G   GS+      I   +V       R+    +       +      V    G +
Sbjct: 142 NISEDGTISGSETGPLGRIGVFDVPEIQSYKRLGAGMLVAPEGAAKPAVAESVQVRQGTL 201

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
           +  NVN + E   + +  R Y      +  + D+   +L
Sbjct: 202 ELSNVNPVREMTRLIDVQRAYERTNTMMGNADDLRRDSL 240


>gi|32476538|ref|NP_869532.1| flagellar hook-associated protein [Rhodopirellula baltica SH 1]
 gi|32447084|emb|CAD76893.1| probable flagellar hook-associated protein [Rhodopirellula baltica
           SH 1]
          Length = 584

 Score = 41.8 bits (96), Expect = 0.032,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 20/46 (43%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            S  +    VN+  E+  M    R + A+ + I  + +M+   L +
Sbjct: 539 QSQHLAITGVNIDEESIKMISYQRAFQASSRVISTAAEMLDILLAI 584



 Score = 38.3 bits (87), Expect = 0.39,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 21/67 (31%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            L  +   +   L      +Q++  NIANA T G               +  +    GV
Sbjct: 23 MGLFGTIQQSKGALDAAQIGLQVVGNNIANANTEGYIRQRLEQTPAVAYRQGNLIQGHGV 82

Query: 62 RVKKIGV 68
          R   +  
Sbjct: 83 RATGVVQ 89


>gi|283953937|ref|ZP_06371466.1| putative flagellar basal-body rod protein [Campylobacter jejuni
           subsp. jejuni 414]
 gi|283794542|gb|EFC33282.1| putative flagellar basal-body rod protein [Campylobacter jejuni
           subsp. jejuni 414]
          Length = 270

 Score = 41.8 bits (96), Expect = 0.032,   Method: Composition-based stats.
 Identities = 12/84 (14%), Positives = 25/84 (29%), Gaps = 1/84 (1%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
            +   +V       +               D  +  A   G  +  NVN + E   + E 
Sbjct: 181 RLFVAQVDDIRALQKDGDNVYKIDDLTRIRDLENSNAIRQGFSQGSNVNPVTEMVGLIEA 240

Query: 108 NRLYMANLQTIKQS-HDMMTTTLD 130
           NR+     + +     D+    ++
Sbjct: 241 NRMVEMYQKVMTAHMDDLNQEAIN 264


>gi|302874613|ref|YP_003843246.1| fagellar hook-basal body protein [Clostridium cellulovorans 743B]
 gi|307690776|ref|ZP_07633222.1| flagellar basal body rod protein FlgG [Clostridium cellulovorans
           743B]
 gi|302577470|gb|ADL51482.1| fagellar hook-basal body protein [Clostridium cellulovorans 743B]
          Length = 254

 Score = 41.8 bits (96), Expect = 0.032,   Method: Composition-based stats.
 Identities = 8/41 (19%), Positives = 20/41 (48%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           ++  NVNV+    +M    R +  N + I+   + +  +++
Sbjct: 208 LEKSNVNVVNGMIEMMSVYREFETNQKVIQTLDETLGKSVN 248



 Score = 39.5 bits (90), Expect = 0.15,   Method: Composition-based stats.
 Identities = 14/38 (36%), Positives = 21/38 (55%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGS 41
          +I + + + SG+  + ARM  IS N+ANA T G     
Sbjct: 1  MIRALYTSLSGMISKEARMNSISNNLANANTVGYKSDD 38


>gi|237653577|ref|YP_002889891.1| flagellar hook-associated protein FlgK [Thauera sp. MZ1T]
 gi|237624824|gb|ACR01514.1| flagellar hook-associated protein FlgK [Thauera sp. MZ1T]
          Length = 660

 Score = 41.8 bits (96), Expect = 0.033,   Method: Composition-based stats.
 Identities = 17/92 (18%), Positives = 29/92 (31%), Gaps = 1/92 (1%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          + +  +I  +GL+   A +   S NIANA T G    +     +   +        G  V
Sbjct: 1  MASLLNIGLTGLSASQAYLNTTSHNIANAATPGFHRQTVTQEARDPQYSGGAFFGTGTGV 60

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIVKYPNV 95
            +    S    E       +  +    Y   
Sbjct: 61 TGVARSYSQL-LEGQVLSADSRRAEYAAYSQF 91


>gi|218662054|ref|ZP_03517984.1| hypothetical protein RetlI_22525 [Rhizobium etli IE4771]
          Length = 88

 Score = 41.8 bits (96), Expect = 0.033,   Method: Composition-based stats.
 Identities = 20/120 (16%), Positives = 35/120 (29%), Gaps = 32/120 (26%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFV 74
           +  Q+ R+  I+ NIAN+ T                    +       VK +    +   
Sbjct: 1   MRAQTTRIGAIANNIANSSTPDYA-----------RLNTSLTAVTSGGVKAVVSPTA--- 46

Query: 75  EEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
                              +V+   E  D+ E    Y AN    +   D+    + + RD
Sbjct: 47  ------------------SDVDPATELTDLLEAELAYKANAVVFETGADLWEMLMSITRD 88


>gi|23092312|gb|AAN08637.1| FlgB [Aeromonas hydrophila]
          Length = 132

 Score = 41.8 bits (96), Expect = 0.033,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 45/124 (36%), Gaps = 2/124 (1%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
            +  I    L+V+S R +++S NIANA T G       + +     +           +K
Sbjct: 7   KAFGIHQYALSVRSKRAEVLSSNIANADTPGFKARDINFSQALEEAQHQQGFGLATTSEK 66

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
               QS         +P+   +G      V+V  E ++    +  Y  +L+ +      +
Sbjct: 67  HFALQSDAPGLTQYRNPLQPDTG--DGNTVDVQQERSEFLRNSLEYQTSLEFMNSKISGL 124

Query: 126 TTTL 129
              L
Sbjct: 125 LKAL 128


>gi|88596898|ref|ZP_01100134.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni 84-25]
 gi|218562336|ref|YP_002344115.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni NCTC 11168]
 gi|88190587|gb|EAQ94560.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni 84-25]
 gi|112360042|emb|CAL34834.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni NCTC 11168]
 gi|284925953|gb|ADC28305.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni IA3902]
 gi|315926811|gb|EFV06185.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
           DFVF1099]
          Length = 270

 Score = 41.8 bits (96), Expect = 0.033,   Method: Composition-based stats.
 Identities = 13/98 (13%), Positives = 28/98 (28%), Gaps = 1/98 (1%)

Query: 34  TTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
               +   D  +   +   +V       +               D  +  A   G  +  
Sbjct: 167 DKNGSIEVDGAQNARLFVAQVDDIRALQKDGDNVYKIDDLTRIRDLKNSNAIRQGFSQGS 226

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQS-HDMMTTTLD 130
           NVN + E   + E NR+     + +     D+    ++
Sbjct: 227 NVNPVTEMVGLIEANRMVEMYQKVMTAHMDDLNQEAIN 264


>gi|168186142|ref|ZP_02620777.1| flagellar basal-body rod protein FlgG [Clostridium botulinum C str.
           Eklund]
 gi|169295678|gb|EDS77811.1| flagellar basal-body rod protein FlgG [Clostridium botulinum C str.
           Eklund]
          Length = 259

 Score = 41.8 bits (96), Expect = 0.033,   Method: Composition-based stats.
 Identities = 9/47 (19%), Positives = 24/47 (51%)

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
               G ++  N+NV+   +DM  + R + +N + ++   + +  T++
Sbjct: 208 MVKQGYLEKSNINVMEAVSDMMMSMRNFESNQKLVQSLDETLGKTVN 254



 Score = 35.2 bits (79), Expect = 2.8,   Method: Composition-based stats.
 Identities = 16/38 (42%), Positives = 21/38 (55%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGS 41
          +I S + A SGL  Q A+  +IS N+ANA T G     
Sbjct: 1  MIRSIYTAVSGLINQEAQQDVISNNLANATTVGYKKDD 38


>gi|84514825|ref|ZP_01002188.1| flagellar basal-body rod protein FlgG [Loktanella vestfoldensis
           SKA53]
 gi|84510984|gb|EAQ07438.1| flagellar basal-body rod protein FlgG [Loktanella vestfoldensis
           SKA53]
          Length = 273

 Score = 41.8 bits (96), Expect = 0.033,   Method: Composition-based stats.
 Identities = 12/80 (15%), Positives = 27/80 (33%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
              E  +   G  R        +  +            SG ++  NV++ +E  DM    
Sbjct: 192 FPNEIALRQIGMNRFLATDGAGTPKIGVGGQDGFGMIQSGTLETSNVDLTIELTDMIRAQ 251

Query: 109 RLYMANLQTIKQSHDMMTTT 128
           + +  + + ++   DM+   
Sbjct: 252 QQFSGSSRILQTYSDMIEKL 271


>gi|331645419|ref|ZP_08346523.1| putative flagella basal body rod protein [Escherichia coli M605]
 gi|323975929|gb|EGB71023.1| fagellar hook-basal body protein [Escherichia coli TW10509]
 gi|331045581|gb|EGI17707.1| putative flagella basal body rod protein [Escherichia coli M605]
          Length = 245

 Score = 41.8 bits (96), Expect = 0.033,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 23/48 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           + G ++  NV+ + E       NR + A ++ +K + D+      LLR
Sbjct: 196 SGGFLEGSNVSAVSEMMSSIAMNRQFEAQIKMMKTAEDISDAGNRLLR 243


>gi|293408368|ref|ZP_06652207.1| conserved hypothetical protein [Escherichia coli B354]
 gi|291471546|gb|EFF14029.1| conserved hypothetical protein [Escherichia coli B354]
          Length = 245

 Score = 41.8 bits (96), Expect = 0.033,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 23/48 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           + G ++  NV+ + E       NR + A ++ +K + D+      LLR
Sbjct: 196 SGGFLEGSNVSAVSEMMSSIAMNRQFEAQIKMMKTAEDISDAGNRLLR 243


>gi|170680219|ref|YP_001742374.1| flagellar basal body rod protein FlgF [Escherichia coli SMS-3-5]
 gi|170517937|gb|ACB16115.1| lateral flagellar rod protein LfgF [Escherichia coli SMS-3-5]
          Length = 245

 Score = 41.8 bits (96), Expect = 0.033,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 23/48 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           + G ++  NV+ + E       NR + A ++ +K + D+      LLR
Sbjct: 196 SGGFLEGSNVSAVSEMMSSIAMNRQFEAQIKMMKTAEDISDAGNRLLR 243


>gi|331671805|ref|ZP_08372601.1| putative flagella basal body rod protein [Escherichia coli TA280]
 gi|59889781|emb|CAH19137.1| Lateral flagellar rod protein (FlgF-like) [Escherichia coli]
 gi|284920045|emb|CBG33102.1| lateral flagellar rod protein (FlgF-like) [Escherichia coli 042]
 gi|331070794|gb|EGI42153.1| putative flagella basal body rod protein [Escherichia coli TA280]
          Length = 245

 Score = 41.8 bits (96), Expect = 0.033,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 23/48 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           + G ++  NV+ + E       NR + A ++ +K + D+      LLR
Sbjct: 196 SGGFLEGSNVSAVSEMMSSIAMNRQFEAQIKMMKTAEDISDAGNRLLR 243


>gi|291288372|ref|YP_003505188.1| flagellar hook-associated protein FlgK [Denitrovibrio acetiphilus
           DSM 12809]
 gi|290885532|gb|ADD69232.1| flagellar hook-associated protein FlgK [Denitrovibrio acetiphilus
           DSM 12809]
          Length = 584

 Score = 41.8 bits (96), Expect = 0.034,   Method: Composition-based stats.
 Identities = 6/40 (15%), Positives = 19/40 (47%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           +   V++  E  ++ +  R + A+ + I    +M+   ++
Sbjct: 538 EVKGVSMDEEMTNLMKFQRAFEASSRFITVVDEMLEKLVN 577



 Score = 37.2 bits (84), Expect = 0.83,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 21/68 (30%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  L+       SGL    A + +   NI+N  T G +                     G
Sbjct: 1  MSNLMHIFSTGVSGLFASQAGIDVTGNNISNVNTEGYSRQRVVLETANPEKNSQGVFGRG 60

Query: 61 VRVKKIGV 68
          V V+ +  
Sbjct: 61 VSVETVER 68


>gi|319787120|ref|YP_004146595.1| flagellar basal-body rod protein FlgF [Pseudoxanthomonas suwonensis
           11-1]
 gi|317465632|gb|ADV27364.1| flagellar basal-body rod protein FlgF [Pseudoxanthomonas suwonensis
           11-1]
          Length = 249

 Score = 41.8 bits (96), Expect = 0.034,   Method: Composition-based stats.
 Identities = 10/64 (15%), Positives = 22/64 (34%)

Query: 70  QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
            +   +           +G ++  NV+       M +  R +   ++ IK   +    + 
Sbjct: 183 NTAPQQPLQQAPGTVMTTGALEESNVDAAGALVQMIQLQRQFEMQVKVIKTGDENARAST 242

Query: 130 DLLR 133
            LLR
Sbjct: 243 SLLR 246


>gi|218703526|ref|YP_002411045.1| flagellar basal body rod protein FlgF [Escherichia coli UMN026]
 gi|293403356|ref|ZP_06647447.1| conserved hypothetical protein [Escherichia coli FVEC1412]
 gi|298378967|ref|ZP_06988848.1| flagellar basal-body rod protein FlgF [Escherichia coli FVEC1302]
 gi|300900358|ref|ZP_07118534.1| flagellar basal body rod protein FlgF [Escherichia coli MS 198-1]
 gi|300936127|ref|ZP_07151066.1| flagellar basal body rod protein FlgF [Escherichia coli MS 21-1]
 gi|218430623|emb|CAR11489.1| Lateral flagellar rod protein (FlgF-like) [Escherichia coli UMN026]
 gi|291429209|gb|EFF02229.1| conserved hypothetical protein [Escherichia coli FVEC1412]
 gi|298280080|gb|EFI21584.1| flagellar basal-body rod protein FlgF [Escherichia coli FVEC1302]
 gi|300356126|gb|EFJ71996.1| flagellar basal body rod protein FlgF [Escherichia coli MS 198-1]
 gi|300458705|gb|EFK22198.1| flagellar basal body rod protein FlgF [Escherichia coli MS 21-1]
 gi|323171065|gb|EFZ56714.1| flagellar basal-body rod protein FlgF [Escherichia coli LT-68]
 gi|323191539|gb|EFZ76800.1| flagellar basal-body rod protein FlgF [Escherichia coli RN587/1]
          Length = 245

 Score = 41.8 bits (96), Expect = 0.034,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 23/48 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           + G ++  NV+ + E       NR + A ++ +K + D+      LLR
Sbjct: 196 SGGFLEGSNVSAVSEMMSSIAMNRQFEAQIKMMKTAEDISDAGNRLLR 243


>gi|170021359|ref|YP_001726313.1| flagellar basal body rod protein FlgF [Escherichia coli ATCC 8739]
 gi|169756287|gb|ACA78986.1| flagellar basal-body rod protein FlgF [Escherichia coli ATCC 8739]
          Length = 245

 Score = 41.8 bits (96), Expect = 0.034,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 23/48 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           + G ++  NV+ + E       NR + A ++ +K + D+      LLR
Sbjct: 196 SGGFLEGSNVSAVSEMMSSIAMNRQFEAQIKMMKTAEDISDAGNRLLR 243


>gi|52082076|ref|YP_080867.1| flagellar hook-associated protein FlgK [Bacillus licheniformis ATCC
           14580]
 gi|52787465|ref|YP_093294.1| flagellar hook-associated protein FlgK [Bacillus licheniformis ATCC
           14580]
 gi|319647943|ref|ZP_08002161.1| FlgK protein [Bacillus sp. BT1B_CT2]
 gi|52005287|gb|AAU25229.1| flagellar hook-associated protein 1 [Bacillus licheniformis ATCC
           14580]
 gi|52349967|gb|AAU42601.1| FlgK [Bacillus licheniformis ATCC 14580]
 gi|317390284|gb|EFV71093.1| FlgK protein [Bacillus sp. BT1B_CT2]
          Length = 507

 Score = 41.8 bits (96), Expect = 0.034,   Method: Composition-based stats.
 Identities = 18/108 (16%), Positives = 34/108 (31%), Gaps = 4/108 (3%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-- 59
           +       IA  GL+ Q + + + + NI+NA T G +     ++  T          G  
Sbjct: 3   NPTFLGLEIAKRGLSAQQSALSVTANNISNANTEGYSRQRVTFKASTPYPSVSRDSVGLA 62

Query: 60  --GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
                  +IG  +       D  +   N         V+   +   + 
Sbjct: 63  GQMGTGVEIGSVERVRDSFLDYQYRTQNTKAGYYNAKVDAFNQMEGIM 110



 Score = 40.2 bits (92), Expect = 0.090,   Method: Composition-based stats.
 Identities = 17/108 (15%), Positives = 33/108 (30%), Gaps = 7/108 (6%)

Query: 23  QIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHP 82
              + N+AN  T     G      KT +  +   G  G    K               + 
Sbjct: 400 NANATNLANVFTKKIQIGD-----KTTTVLDYYAGIIGEMGVKAQETNRLAKNTETLVNT 454

Query: 83  VANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
                  V    V++  E ++M +    Y A  + I    +++   ++
Sbjct: 455 AELNRQSV--SAVSLDEEMSNMIQFQHAYNAAARMITLQDEVLDKIIN 500


>gi|37525847|ref|NP_929191.1| flagellar hook-associated protein FlgK [Photorhabdus luminescens
           subsp. laumondii TTO1]
 gi|36785276|emb|CAE14217.1| Flagellar hook-associated protein 1 (HAP1) [Photorhabdus
           luminescens subsp. laumondii TTO1]
 gi|37681983|gb|AAQ97871.1| FlgK [Photorhabdus luminescens]
          Length = 549

 Score = 41.8 bits (96), Expect = 0.035,   Method: Composition-based stats.
 Identities = 20/133 (15%), Positives = 41/133 (30%), Gaps = 6/133 (4%)

Query: 8   AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
            +IA SGL      +  +S N+AN++  G    S    +   +   V     GV V  I 
Sbjct: 6   INIAMSGLQAAQIALGTVSNNLANSKVPGYNRQSTVVNQNGGTMTSVGFIGNGVTVTSIN 65

Query: 68  VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRL------YMANLQTIKQS 121
              + F+ +                  ++ +      +  N        + +    +  +
Sbjct: 66  RQYNEFINQQLSEARAKQGEFTTYSQQISQIDNLLADKANNLSNTIDDFFTSLQNVVSNA 125

Query: 122 HDMMTTTLDLLRD 134
            D    T  + + 
Sbjct: 126 EDDAARTTAIGKS 138



 Score = 33.3 bits (74), Expect = 10.0,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 45/124 (36%), Gaps = 8/124 (6%)

Query: 12  NSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQS 71
            S LA    +    S+N+ NA+   +        +K +       G+    V  IG   S
Sbjct: 432 ASKLAAAGNKDGGASDNV-NAKKLIELQN-----KKLVEGNASFSGAYASMVSTIGNQTS 485

Query: 72  TFVEEFDPGHPVANASGIVKYP--NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
               + +  + +       +     VNV  E   ++   + Y+AN Q I+    +    L
Sbjct: 486 EANVDLETQNNITKQLYADQQSVSGVNVDEEYGALQNLQQYYLANAQVIQTVTTLFNAIL 545

Query: 130 DLLR 133
           +L R
Sbjct: 546 ELRR 549


>gi|86151576|ref|ZP_01069790.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni 260.94]
 gi|157414984|ref|YP_001482240.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni 81116]
 gi|85841205|gb|EAQ58453.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni 260.94]
 gi|157385948|gb|ABV52263.1| putative flagellar basal-body rod protein [Campylobacter jejuni
           subsp. jejuni 81116]
 gi|307747621|gb|ADN90891.1| Flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni M1]
 gi|315931896|gb|EFV10851.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
           327]
          Length = 270

 Score = 41.8 bits (96), Expect = 0.035,   Method: Composition-based stats.
 Identities = 12/84 (14%), Positives = 25/84 (29%), Gaps = 1/84 (1%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
            +   +V       +               D  +  A   G  +  NVN + E   + E 
Sbjct: 181 RLFVAQVDDIRALQKDGDNVYKIDDLTRIRDLENSNAIRQGFSQGSNVNPVTEMVGLIEA 240

Query: 108 NRLYMANLQTIKQS-HDMMTTTLD 130
           NR+     + +     D+    ++
Sbjct: 241 NRMVEMYQKVMTAHMDDLNQEAIN 264


>gi|315124199|ref|YP_004066203.1| putative flagellar basal-body rod protein [Campylobacter jejuni
           subsp. jejuni ICDCCJ07001]
 gi|315017921|gb|ADT66014.1| putative flagellar basal-body rod protein [Campylobacter jejuni
           subsp. jejuni ICDCCJ07001]
          Length = 270

 Score = 41.8 bits (96), Expect = 0.035,   Method: Composition-based stats.
 Identities = 12/84 (14%), Positives = 25/84 (29%), Gaps = 1/84 (1%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
            +   +V       +               D  +  A   G  +  NVN + E   + E 
Sbjct: 181 RLFVAQVDDIRALQKDGDNVYKIDDLTRIRDLKNSNAIRQGFSQGSNVNPVTEMVGLIEA 240

Query: 108 NRLYMANLQTIKQS-HDMMTTTLD 130
           NR+     + +     D+    ++
Sbjct: 241 NRMVEMYQKVMTAHMDDLNQEAIN 264


>gi|221635450|ref|YP_002523326.1| flagellar basal-body rod protein FlgF (Putative proximal rod
           protein) [Thermomicrobium roseum DSM 5159]
 gi|221157298|gb|ACM06416.1| flagellar basal-body rod protein FlgF (Putative proximal rod
           protein) [Thermomicrobium roseum DSM 5159]
          Length = 248

 Score = 41.8 bits (96), Expect = 0.035,   Method: Composition-based stats.
 Identities = 8/52 (15%), Positives = 22/52 (42%)

Query: 79  PGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           P      + G ++  NV++     DM    R Y    ++++ + + +   ++
Sbjct: 189 PSETTGVSQGFLEASNVDLTQTLTDMLAATRSYQLAARSLQLADETLRLAVN 240


>gi|57237000|ref|YP_178801.1| flagellar basal-body rod protein [Campylobacter jejuni RM1221]
 gi|86149760|ref|ZP_01067989.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni CF93-6]
 gi|57165804|gb|AAW34583.1| flagellar basal-body rod protein [Campylobacter jejuni RM1221]
 gi|85839578|gb|EAQ56838.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni CF93-6]
 gi|315058160|gb|ADT72489.1| Flagellar basal-body rod protein flgF [Campylobacter jejuni subsp.
           jejuni S3]
          Length = 270

 Score = 41.8 bits (96), Expect = 0.035,   Method: Composition-based stats.
 Identities = 12/84 (14%), Positives = 25/84 (29%), Gaps = 1/84 (1%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
            +   +V       +               D  +  A   G  +  NVN + E   + E 
Sbjct: 181 RLFVAQVDDIRALQKDGDNVYKIDDLTRIRDLKNSNAIRQGFSQGSNVNPVTEMVGLIEA 240

Query: 108 NRLYMANLQTIKQS-HDMMTTTLD 130
           NR+     + +     D+    ++
Sbjct: 241 NRMVEMYQKVMTAHMDDLNQEAIN 264


>gi|327543408|gb|EGF29832.1| flagellar hook-associated protein FlgK [Rhodopirellula baltica
           WH47]
          Length = 562

 Score = 41.8 bits (96), Expect = 0.035,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 20/46 (43%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            S  +    VN+  E+  M    R + A+ + I  + +M+   L +
Sbjct: 517 QSQHLAITGVNIDEESIKMISYQRAFQASSRVISTAAEMLDILLAI 562



 Score = 37.9 bits (86), Expect = 0.44,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 21/67 (31%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            L  +   +   L      +Q++  NIANA T G               +  +    GV
Sbjct: 1  MGLFGTIQQSKGALDAAQIGLQVVGNNIANANTEGYIRQRLEQTPAVAYRQGNLIQGHGV 60

Query: 62 RVKKIGV 68
          R   +  
Sbjct: 61 RATGVVQ 67


>gi|307546967|ref|YP_003899446.1| flagellar basal body rod protein FlgF [Halomonas elongata DSM 2581]
 gi|307218991|emb|CBV44261.1| flagellar basal body rod protein FlgF [Halomonas elongata DSM 2581]
          Length = 253

 Score = 41.8 bits (96), Expect = 0.035,   Method: Composition-based stats.
 Identities = 17/103 (16%), Positives = 33/103 (32%)

Query: 30  ANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGI 89
           A A        +   R K ++ E+     G   + +    +   V            SG 
Sbjct: 147 AIAPGQQADALAAVGRIKLVTPEQGGLERGVDGLFRAPPGEDGAVAALPADDQAQVVSGA 206

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           ++  NV+ +     M +  R Y    + I+ + +       LL
Sbjct: 207 LEGSNVSAVDAMVSMIDVARRYELQTKVIETADENAQRANSLL 249


>gi|206895667|ref|YP_002246664.1| flagellar hook-basal body complex protein, putative
           [Coprothermobacter proteolyticus DSM 5265]
 gi|206738284|gb|ACI17362.1| flagellar hook-basal body complex protein, putative
           [Coprothermobacter proteolyticus DSM 5265]
          Length = 227

 Score = 41.8 bits (96), Expect = 0.035,   Method: Composition-based stats.
 Identities = 5/46 (10%), Positives = 21/46 (45%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
              ++  NV+ + +   +    R Y +N++ ++     +   ++++
Sbjct: 181 QTYLETSNVDEIGQVTALMTILRHYQSNVKVVQAEDAALAKIINIM 226


>gi|331666547|ref|ZP_08367421.1| putative flagella basal body rod protein [Escherichia coli TA271]
 gi|331065771|gb|EGI37655.1| putative flagella basal body rod protein [Escherichia coli TA271]
          Length = 245

 Score = 41.8 bits (96), Expect = 0.036,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 23/48 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           + G ++  NV+ + E       NR + A ++ +K + D+      LLR
Sbjct: 196 SGGFLEGSNVSAVSEMMSSIAMNRQFEAQIKMMKTAEDISDAGNRLLR 243


>gi|294501850|ref|YP_003565550.1| flagellar hook-basal body complex protein FlhP [Bacillus megaterium
           QM B1551]
 gi|294351787|gb|ADE72116.1| flagellar hook-basal body complex protein FlhP [Bacillus megaterium
           QM B1551]
          Length = 273

 Score = 41.8 bits (96), Expect = 0.036,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 19/42 (45%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           ++  NV++  E  DM    R Y  N ++I  +  MM     +
Sbjct: 230 LEQSNVDLSKELTDMSIAQRAYQFNSRSISIADQMMGLVNGI 271


>gi|134280876|ref|ZP_01767586.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei
           305]
 gi|125657219|gb|ABN48707.1| flagellar basal body rod protein [Burkholderia pseudomallei]
 gi|134247898|gb|EBA47982.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei
           305]
          Length = 241

 Score = 41.8 bits (96), Expect = 0.036,   Method: Composition-based stats.
 Identities = 10/54 (18%), Positives = 21/54 (38%)

Query: 80  GHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            + V    G ++  NV+ + E       NR +   ++    + +M      L+R
Sbjct: 187 SNEVKVLGGHLERSNVSPVEEMIATMSLNRAFEVQMRMFNAAGEMADAGNRLIR 240


>gi|57238490|ref|YP_179621.1| flagellar hook-associated protein FlgK [Campylobacter jejuni
           RM1221]
 gi|57167294|gb|AAW36073.1| flagellar hook-associated protein FlgK, putative [Campylobacter
           jejuni RM1221]
 gi|315058921|gb|ADT73250.1| Flagellar hook-associated protein flgK [Campylobacter jejuni subsp.
           jejuni S3]
          Length = 608

 Score = 41.8 bits (96), Expect = 0.036,   Method: Composition-based stats.
 Identities = 19/109 (17%), Positives = 29/109 (26%), Gaps = 2/109 (1%)

Query: 26  SENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVAN 85
             ++AN          + Y          M         KI  D             + N
Sbjct: 499 GNDMANKIIQLQYEKVNFYNEDGTIDNLTMEEYYRKLTGKIASDGENNNVVNSSNETLYN 558

Query: 86  A--SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  S       VN   E A + +    Y A  + +     M+ T L L 
Sbjct: 559 SVYSEYQSKSGVNTNEELAALIQYQSSYGAAAKIVSTVDQMLDTLLGLK 607



 Score = 36.0 bits (81), Expect = 1.9,   Method: Composition-based stats.
 Identities = 11/72 (15%), Positives = 21/72 (29%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            +  + +   +GL     ++     NI+NA  T  T                +    G 
Sbjct: 1  MGIFGTLYTGVTGLKASEVQIATTGNNISNANATFYTRQRVVQTTNGYITTGGVQVGTGT 60

Query: 62 RVKKIGVDQSTF 73
           V+ I      +
Sbjct: 61 AVESIVRLHDEY 72


>gi|315654567|ref|ZP_07907473.1| flagellar hook-associated protein FlgK [Mobiluncus curtisii ATCC
           51333]
 gi|315491031|gb|EFU80650.1| flagellar hook-associated protein FlgK [Mobiluncus curtisii ATCC
           51333]
          Length = 681

 Score = 41.8 bits (96), Expect = 0.036,   Method: Composition-based stats.
 Identities = 5/41 (12%), Positives = 18/41 (43%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            +V++  E  ++ +    Y    + +   + M+   +++ R
Sbjct: 641 SSVDMNEEVINLIQGQHAYAGAARIMSTVNSMLEALINIGR 681


>gi|295697521|ref|YP_003590759.1| flagellar hook-associated protein FlgK [Bacillus tusciae DSM 2912]
 gi|295413123|gb|ADG07615.1| flagellar hook-associated protein FlgK [Bacillus tusciae DSM 2912]
          Length = 540

 Score = 41.8 bits (96), Expect = 0.036,   Method: Composition-based stats.
 Identities = 7/38 (18%), Positives = 17/38 (44%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             V++  E A+M    + Y A+ + +     M+   ++
Sbjct: 496 AGVSIDEEMANMIRFQQAYGASARMVTAIDQMLDKLIN 533



 Score = 36.4 bits (82), Expect = 1.4,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 35/109 (32%), Gaps = 4/109 (3%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG- 59
           M +       A  GL  Q A +   S NI NA T G T         T      ++ +  
Sbjct: 1   MLWTFFGLETAVRGLRGQQAAINTASHNIDNANTPGYTRQRVDLSASTPIEMPSLYKTAT 60

Query: 60  -GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
            G     + V+Q T + +        + +  +   NV    +  D    
Sbjct: 61  PGQIGTGVQVEQITRLRDQFLDDQYRHQNQYLGEWNVR--QDALDKISA 107


>gi|301645414|ref|ZP_07245355.1| flagellar basal body rod protein FlgF [Escherichia coli MS 146-1]
 gi|307136859|ref|ZP_07496215.1| flagellar basal body rod protein FlgF [Escherichia coli H736]
 gi|331640714|ref|ZP_08341861.1| putative flagella basal body rod protein [Escherichia coli H736]
 gi|301076298|gb|EFK91104.1| flagellar basal body rod protein FlgF [Escherichia coli MS 146-1]
 gi|315616826|gb|EFU97443.1| flagellar basal-body rod protein FlgF [Escherichia coli 3431]
 gi|331040088|gb|EGI12296.1| putative flagella basal body rod protein [Escherichia coli H736]
          Length = 245

 Score = 41.8 bits (96), Expect = 0.036,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 23/48 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           + G ++  NV+ + E       NR + A ++ +K + D+      LLR
Sbjct: 196 SGGFLEGSNVSAVSEMMSSIAMNRQFEAQIKMMKTAEDISDAGNRLLR 243


>gi|256020229|ref|ZP_05434094.1| flagellar basal body rod protein FlgF [Shigella sp. D9]
 gi|260853467|ref|YP_003227358.1| putative lateral flagellar component of cell-proximal portion of
           basal-body rod [Escherichia coli O26:H11 str. 11368]
 gi|260866414|ref|YP_003232816.1| putative lateral flagellar component of cell-proximal portion of
           basal-body rod [Escherichia coli O111:H- str. 11128]
 gi|332281391|ref|ZP_08393804.1| lateral flagellar rod protein [Shigella sp. D9]
 gi|257752116|dbj|BAI23618.1| predicted lateral flagellar component of cell-proximal portion of
           basal-body rod [Escherichia coli O26:H11 str. 11368]
 gi|257762770|dbj|BAI34265.1| predicted lateral flagellar component of cell-proximal portion of
           basal-body rod [Escherichia coli O111:H- str. 11128]
 gi|323158102|gb|EFZ44201.1| flagellar basal-body rod protein FlgF [Escherichia coli EPECa14]
 gi|323178493|gb|EFZ64071.1| flagellar basal-body rod protein FlgF [Escherichia coli 1180]
 gi|323181548|gb|EFZ66968.1| flagellar basal-body rod protein FlgF [Escherichia coli 1357]
 gi|332103743|gb|EGJ07089.1| lateral flagellar rod protein [Shigella sp. D9]
          Length = 245

 Score = 41.8 bits (96), Expect = 0.036,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 23/48 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           + G ++  NV+ + E       NR + A ++ +K + D+      LLR
Sbjct: 196 SGGFLEGSNVSAVSEMMSSIAMNRQFEAQIKMMKTAEDISDAGNRLLR 243


>gi|205355539|ref|ZP_03222310.1| putative flagellar basaL body rod protein [Campylobacter jejuni
           subsp. jejuni CG8421]
 gi|205346773|gb|EDZ33405.1| putative flagellar basaL body rod protein [Campylobacter jejuni
           subsp. jejuni CG8421]
          Length = 270

 Score = 41.8 bits (96), Expect = 0.036,   Method: Composition-based stats.
 Identities = 12/84 (14%), Positives = 25/84 (29%), Gaps = 1/84 (1%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
            +   +V       +               D  +  A   G  +  NVN + E   + E 
Sbjct: 181 RLFVAQVDDIRALQKDGDNVYKIDDLTRIRDLKNSNAIRQGFSQGSNVNPVTEMVGLIEA 240

Query: 108 NRLYMANLQTIKQS-HDMMTTTLD 130
           NR+     + +     D+    ++
Sbjct: 241 NRMVEMYQKVMTAHMDDLNQEAIN 264


>gi|15022422|dbj|BAB62243.1| flagellar protein [Treponema medium]
          Length = 280

 Score = 41.8 bits (96), Expect = 0.036,   Method: Composition-based stats.
 Identities = 14/42 (33%), Positives = 20/42 (47%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S     SG+     RM +I  NIAN  TTG   G   ++
Sbjct: 1  MMRSLFSGVSGMQNHQTRMDVIGNNIANVNTTGFKRGRVNFQ 42


>gi|257095358|ref|YP_003168999.1| flagellar basal-body rod protein FlgF [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257047882|gb|ACV37070.1| flagellar basal-body rod protein FlgF [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 249

 Score = 41.8 bits (96), Expect = 0.036,   Method: Composition-based stats.
 Identities = 19/127 (14%), Positives = 32/127 (25%), Gaps = 15/127 (11%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
            +  IA  G      R+   + N  N              R  +          G     
Sbjct: 134 NNIAIAADGTVSAIPRLGAGAINNVNV-----------VGRIKLVNPPESDLVRGDDGLF 182

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
              D    V        V  A   ++  NVN +     M    R +   ++ ++ +    
Sbjct: 183 RTRDGVPAVA----DETVTLAPEALEGSNVNSVDAMVRMISLARQFEMQIKMLQTADGNA 238

Query: 126 TTTLDLL 132
                LL
Sbjct: 239 RAATQLL 245


>gi|150020229|ref|YP_001305583.1| flagellar hook-associated protein FlgK [Thermosipho melanesiensis
           BI429]
 gi|149792750|gb|ABR30198.1| flagellar hook-associated protein FlgK [Thermosipho melanesiensis
           BI429]
          Length = 846

 Score = 41.8 bits (96), Expect = 0.036,   Method: Composition-based stats.
 Identities = 13/102 (12%), Positives = 34/102 (33%), Gaps = 1/102 (0%)

Query: 30  ANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGI 89
           AN             +      E      GG+  +     ++    + +    + + S  
Sbjct: 738 ANTTIMEYLSSMRFEKILNDGRESFAEYLGGIVAEMGVEGETAMKMKNNTDIVMKDISNE 797

Query: 90  VKY-PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            +    V++  E A+M +    + A+ + +    +M+   +D
Sbjct: 798 RERVKGVSLDEEMANMIKFQHAFNASARVMTAVDEMIGRVID 839



 Score = 34.8 bits (78), Expect = 3.6,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 19/57 (33%)

Query: 3  YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
           L  + +    G+      M ++S NIANA T G +      R         +    
Sbjct: 5  SLFGALNTGLLGIYTSKLAMNVVSHNIANANTPGFSRQVPIIRTMPPIPATTLTQPS 61


>gi|90021854|ref|YP_527681.1| flagellar basal body rod protein FlgF [Saccharophagus degradans
           2-40]
 gi|89951454|gb|ABD81469.1| Flagellar basal-body rod FlgF [Saccharophagus degradans 2-40]
          Length = 249

 Score = 41.8 bits (96), Expect = 0.036,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 25/62 (40%)

Query: 72  TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
               E      V   SG ++  NVN + E   M E +R Y   ++ ++       ++  L
Sbjct: 185 ENDGEVQADGTVRIVSGFLEASNVNAVNELVSMLELSRQYEMQVKVMQTIKQNSESSSKL 244

Query: 132 LR 133
           L+
Sbjct: 245 LQ 246


>gi|260437430|ref|ZP_05791246.1| flagellar hook-associated protein FlgK [Butyrivibrio crossotus DSM
           2876]
 gi|292810062|gb|EFF69267.1| flagellar hook-associated protein FlgK [Butyrivibrio crossotus DSM
           2876]
          Length = 543

 Score = 41.4 bits (95), Expect = 0.037,   Method: Composition-based stats.
 Identities = 23/101 (22%), Positives = 34/101 (33%), Gaps = 1/101 (0%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M        I +SGL   +A +   + NI+N  T G T      +          +G+ G
Sbjct: 1   MANTFFGLTIGSSGLFASNAAINTTAHNISNINTKGYTKQVSNQQAAESIRVYQSYGTVG 60

Query: 61  VRVKKIGVDQ-STFVEEFDPGHPVANASGIVKYPNVNVLVE 100
                I +DQ  +   +    H   N        N   LVE
Sbjct: 61  TGTAVISIDQLRSSYYDTKYRHANTNCGQYNSLQNYTTLVE 101


>gi|218674651|ref|ZP_03524320.1| flagellar hook protein FlgE [Rhizobium etli GR56]
          Length = 77

 Score = 41.4 bits (95), Expect = 0.037,   Method: Composition-based stats.
 Identities = 20/64 (31%), Positives = 31/64 (48%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            +  S   A SG++ Q+ R+  +S+NIANA TTG    S  +    +      + SGGV
Sbjct: 1  MSIFGSMKTAVSGMSAQANRLSTVSDNIANANTTGYKAVSTSFSSLVLPSSSGNYNSGGV 60

Query: 62 RVKK 65
          +   
Sbjct: 61 QTSV 64


>gi|183222558|ref|YP_001840554.1| flagellar hook-associated protein FlgK [Leptospira biflexa serovar
           Patoc strain 'Patoc 1 (Paris)']
 gi|189912593|ref|YP_001964148.1| flagellar hook-associated protein FlgK [Leptospira biflexa serovar
           Patoc strain 'Patoc 1 (Ames)']
 gi|167777269|gb|ABZ95570.1| Endoflagellar hook junction protein [Leptospira biflexa serovar
           Patoc strain 'Patoc 1 (Ames)']
 gi|167780980|gb|ABZ99278.1| Flagellar hook-associated protein 1 (HAP1) [Leptospira biflexa
           serovar Patoc strain 'Patoc 1 (Paris)']
          Length = 637

 Score = 41.4 bits (95), Expect = 0.037,   Method: Composition-based stats.
 Identities = 12/84 (14%), Positives = 35/84 (41%), Gaps = 2/84 (2%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP--NVNVLVETADMRE 106
             + +         + ++G +     +E+   + +      ++     VN+  E A+M +
Sbjct: 550 FDYSKTTDDFYNSLISRLGTEAREAKQEYTTQNELMVELENMRQSVMGVNLDEEMANMVQ 609

Query: 107 TNRLYMANLQTIKQSHDMMTTTLD 130
             + Y A+ + I   ++M+ T ++
Sbjct: 610 FQQSYNASARMISTLNEMLDTIIN 633



 Score = 33.7 bits (75), Expect = 8.8,   Method: Composition-based stats.
 Identities = 14/78 (17%), Positives = 21/78 (26%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M        I   GL+V    +Q    NI+NA                  ++   + +  
Sbjct: 1  MGSTFQGIEIGKRGLSVHQQAIQTTGHNISNADNKHYARQRVVMNSMDPIYDPAFNRAEV 60

Query: 61 VRVKKIGVDQSTFVEEFD 78
                GV  S      D
Sbjct: 61 PGQIGQGVKISEIERVRD 78


>gi|148926662|ref|ZP_01810343.1| putative flagellar basal-body rod protein [Campylobacter jejuni
           subsp. jejuni CG8486]
 gi|145845181|gb|EDK22276.1| putative flagellar basal-body rod protein [Campylobacter jejuni
           subsp. jejuni CG8486]
          Length = 270

 Score = 41.4 bits (95), Expect = 0.037,   Method: Composition-based stats.
 Identities = 12/84 (14%), Positives = 25/84 (29%), Gaps = 1/84 (1%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
            +   +V       +               D  +  A   G  +  NVN + E   + E 
Sbjct: 181 RLFVAQVDDIRALQKDGDNVYKIDDLTRIRDLKNSNAIRQGFSQGSNVNPVTEMVGLIEA 240

Query: 108 NRLYMANLQTIKQS-HDMMTTTLD 130
           NR+     + +     D+    ++
Sbjct: 241 NRMVEMYQKVMTAHMDDLNQEAIN 264


>gi|38570329|gb|AAR24612.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni]
          Length = 270

 Score = 41.4 bits (95), Expect = 0.037,   Method: Composition-based stats.
 Identities = 12/84 (14%), Positives = 25/84 (29%), Gaps = 1/84 (1%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
            +   +V       +               D  +  A   G  +  NVN + E   + E 
Sbjct: 181 RLFVAQVDDIRALQKDGDNVYKIDDLTRIRDLKNSNAIRKGFSQGSNVNPVTEMVGLIEA 240

Query: 108 NRLYMANLQTIKQS-HDMMTTTLD 130
           NR+     + +     D+    ++
Sbjct: 241 NRMVEMYQKVMTAHMDDLNQEAIN 264


>gi|319898631|ref|YP_004158724.1| flagellar basal-body rod protein flgF [Bartonella clarridgeiae 73]
 gi|319402595|emb|CBI76140.1| Flagellar basal-body rod protein flgF [Bartonella clarridgeiae 73]
          Length = 244

 Score = 41.4 bits (95), Expect = 0.038,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 28/59 (47%)

Query: 74  VEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           V + + G       G ++  NVN ++E   + E +R +      ++Q  +M + ++ +L
Sbjct: 182 VLQSEAGSGDGVMQGYIESSNVNGVIEMTRLIEVSRAFERVESMLRQQEEMRSKSIQVL 240


>gi|260222474|emb|CBA32074.1| hypothetical protein Csp_D30300 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 656

 Score = 41.4 bits (95), Expect = 0.038,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 46/135 (34%), Gaps = 6/135 (4%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           ++  +I    L      +Q    NIAN  T G +  +   +     F    +   GV V+
Sbjct: 1   MSILNIGTRALQANQIALQTAGNNIANVNTPGYSRQNVVLKAVEGQFSGGGYVGKGVEVQ 60

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVET----ADMRETNRLYMANL--QTI 118
            I    S F+           ++ +V+  N+  L +     +D    +   M N      
Sbjct: 61  TIQRSFSAFLTRQATLASSTQSADVVRSNNLKQLQDIFSGGSDGLGASISDMMNAFSDVA 120

Query: 119 KQSHDMMTTTLDLLR 133
               D+   T+ L R
Sbjct: 121 SSPSDLTARTVALTR 135



 Score = 34.8 bits (78), Expect = 4.2,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 21/42 (50%), Gaps = 1/42 (2%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD-LLR 133
             VN+  E A + +  + Y A+ + I+ + ++  T +  L R
Sbjct: 615 SGVNLDEEAAKLIQFQQAYQASAKMIQIAQNIFDTLIQGLGR 656


>gi|167905091|ref|ZP_02492296.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei
           NCTC 13177]
          Length = 241

 Score = 41.4 bits (95), Expect = 0.038,   Method: Composition-based stats.
 Identities = 10/54 (18%), Positives = 21/54 (38%)

Query: 80  GHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            + V    G ++  NV+ + E       NR +   ++    + +M      L+R
Sbjct: 187 SNEVKVLGGHLERSNVSPVEEMIATMSLNRAFEVQMRMFNAAGEMADAGNRLIR 240


>gi|144900469|emb|CAM77333.1| flagellar basal-body rod protein FlgB [Magnetospirillum
           gryphiswaldense MSR-1]
          Length = 132

 Score = 41.4 bits (95), Expect = 0.038,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 47/132 (35%), Gaps = 7/132 (5%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M   +   ++A S +   + R +++SENIANA     TP   P   K  +F++V+  S  
Sbjct: 1   MYDKLTLVNLAQSRMDWIARRQEVLSENIANAN----TPKYIPKDLKPYNFKDVLDQSVP 56

Query: 61  V---RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
               R          F +E                  V +  + A + E    Y      
Sbjct: 57  AVKLRATNTAHVVPEFRDEQRVVDTKKVFESSPDGNAVVLEEQMAKVGEAKTAYDVAAGL 116

Query: 118 IKQSHDMMTTTL 129
            ++   M+ T L
Sbjct: 117 FQRQFKMLKTAL 128


>gi|170722885|ref|YP_001750573.1| flagellar hook-associated protein FlgK [Pseudomonas putida W619]
 gi|169760888|gb|ACA74204.1| flagellar hook-associated protein FlgK [Pseudomonas putida W619]
          Length = 682

 Score = 41.4 bits (95), Expect = 0.038,   Method: Composition-based stats.
 Identities = 18/99 (18%), Positives = 33/99 (33%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           + +  +I  SGL+   + +     NIANA   G +   +  R K    E  +    G  +
Sbjct: 1   MASLINIGMSGLSASQSGLHTTGNNIANADVAGYSRQQNIQRAKGSLQEGQLFMGTGTTL 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETA 102
             +    + F++         N+        V  L    
Sbjct: 61  ADVRRVYNAFLDAQLQTATSLNSDSTAYLNQVTPLNNLL 99


>gi|126445461|ref|YP_001061247.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei
           668]
 gi|167725931|ref|ZP_02409167.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei
           DM98]
 gi|254182893|ref|ZP_04889486.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei
           1655]
 gi|254299685|ref|ZP_04967134.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei
           406e]
 gi|126224952|gb|ABN88457.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei
           668]
 gi|157809369|gb|EDO86539.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei
           406e]
 gi|184213427|gb|EDU10470.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei
           1655]
          Length = 241

 Score = 41.4 bits (95), Expect = 0.038,   Method: Composition-based stats.
 Identities = 10/54 (18%), Positives = 21/54 (38%)

Query: 80  GHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            + V    G ++  NV+ + E       NR +   ++    + +M      L+R
Sbjct: 187 SNEVKVLGGHLERSNVSPVEEMIATMSLNRAFEVQMRMFNAAGEMADAGNRLIR 240


>gi|121612872|ref|YP_001001115.1| flagellar hook-associated protein FlgK [Campylobacter jejuni subsp.
           jejuni 81-176]
 gi|87249591|gb|EAQ72550.1| flagellar hook-associated protein FlgK, putative [Campylobacter
           jejuni subsp. jejuni 81-176]
          Length = 608

 Score = 41.4 bits (95), Expect = 0.038,   Method: Composition-based stats.
 Identities = 19/109 (17%), Positives = 29/109 (26%), Gaps = 2/109 (1%)

Query: 26  SENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVAN 85
             ++AN          + Y          M         KI  D             + N
Sbjct: 499 GNDMANKIIQLQYEKVNFYNEDGTIDNLTMEEYYRKLTGKIASDGENNNVVNSSNETLYN 558

Query: 86  A--SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  S       VN   E A + +    Y A  + +     M+ T L L 
Sbjct: 559 SVYSEYQSKSGVNTNEELAALIQYQSSYGAAAKIVSTVDQMLDTLLGLK 607



 Score = 34.8 bits (78), Expect = 4.0,   Method: Composition-based stats.
 Identities = 10/72 (13%), Positives = 21/72 (29%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            +  + +   +GL     ++     NI+NA  T  T                +    G 
Sbjct: 1  MGIFGTLYTGVTGLKASEVQIATTGNNISNANATFYTRQRVVQTTNGYITTGGVQVGTGT 60

Query: 62 RVKKIGVDQSTF 73
           ++ I      +
Sbjct: 61 AIESIVRLHDEY 72


>gi|126175145|ref|YP_001051294.1| flagellar basal body rod protein FlgF [Shewanella baltica OS155]
 gi|125998350|gb|ABN62425.1| flagellar basal-body rod protein FlgF [Shewanella baltica OS155]
          Length = 247

 Score = 41.4 bits (95), Expect = 0.038,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 23/48 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            SG V+  NVN + E   + +  R +   ++ +K + +    +  L+R
Sbjct: 198 ESGAVEGSNVNPVDEMVSLIDLQRQFELQVKMMKTAEENDRASSSLMR 245


>gi|152997581|ref|YP_001342416.1| flagellar basal-body rod protein FlgF [Marinomonas sp. MWYL1]
 gi|150838505|gb|ABR72481.1| flagellar basal-body rod protein FlgF [Marinomonas sp. MWYL1]
          Length = 247

 Score = 41.4 bits (95), Expect = 0.039,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 22/47 (46%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG ++  NVN + E   +    R +  N++ +    D   ++  +L+
Sbjct: 198 SGFIEGSNVNAVEEMTHIMNLARRFEMNVKMMDTIRDNADSSARILQ 244


>gi|56965597|ref|YP_177331.1| flagellar basal-body rod protein [Bacillus clausii KSM-K16]
 gi|56911843|dbj|BAD66370.1| flagellar basal-body rod protein [Bacillus clausii KSM-K16]
          Length = 262

 Score = 41.4 bits (95), Expect = 0.039,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 27/67 (40%)

Query: 67  GVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
            + +   V E            +++  NV++ +E A++ ET RL     +    + DM  
Sbjct: 196 VLPELPGVSEEVVAADEHMKQNMLEQANVDLGLEMAELMETQRLLQFQARAYSFADDMAG 255

Query: 127 TTLDLLR 133
              ++ R
Sbjct: 256 LANNIRR 262


>gi|327254555|gb|EGE66171.1| flagellar basal-body rod protein FlgF [Escherichia coli STEC_7v]
          Length = 245

 Score = 41.4 bits (95), Expect = 0.039,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 23/48 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           + G ++  NV+ + E       NR + A ++ +K + D+      LLR
Sbjct: 196 SGGFLEGSNVSAVSEMMSSIAMNRQFEAQIKMMKTAEDISDAGNRLLR 243


>gi|126463751|ref|YP_001044865.1| flagellar basal body rod protein FlgB [Rhodobacter sphaeroides ATCC
           17029]
 gi|332559807|ref|ZP_08414129.1| FlgB2 [Rhodobacter sphaeroides WS8N]
 gi|126105415|gb|ABN78093.1| flagellar basal-body rod protein FlgB [Rhodobacter sphaeroides ATCC
           17029]
 gi|332277519|gb|EGJ22834.1| FlgB2 [Rhodobacter sphaeroides WS8N]
          Length = 127

 Score = 41.4 bits (95), Expect = 0.039,   Method: Composition-based stats.
 Identities = 23/134 (17%), Positives = 43/134 (32%), Gaps = 8/134 (5%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M   +    +A S       R ++++ N+ANA T G      P      S    +  +  
Sbjct: 1   MFEKLEIVRMAQSMARHAGLRTEVVAHNLANADTPGYRAQDLPEFESYASGTVGLRTTRP 60

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
             ++      +  V    PG    N +       V++  E        + +   L   + 
Sbjct: 61  GHLRSAEASAADPVPVEGPGAASPNGNT------VSLEDEMVRAVAARQQHEMALAIYQS 114

Query: 121 SHDMMTTTLDLLRD 134
           S  ++ T   L R 
Sbjct: 115 SSRLIRT--SLGRS 126


>gi|329888225|ref|ZP_08266823.1| flagellar basal-body rod protein FlgF [Brevundimonas diminuta ATCC
           11568]
 gi|328846781|gb|EGF96343.1| flagellar basal-body rod protein FlgF [Brevundimonas diminuta ATCC
           11568]
          Length = 245

 Score = 41.4 bits (95), Expect = 0.040,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 28/53 (52%), Gaps = 1/53 (1%)

Query: 82  PVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD-LLR 133
                 G+++  NVN LVE  ++ E +R Y    + I+ ++D+   +++ L R
Sbjct: 191 DAQVRQGMLEGSNVNTLVEITNLIEISRAYERVTKMIENANDLSRRSVERLGR 243


>gi|188495566|ref|ZP_03002836.1| flagellar basal-body rod protein FlgF [Escherichia coli 53638]
 gi|188490765|gb|EDU65868.1| flagellar basal-body rod protein FlgF [Escherichia coli 53638]
          Length = 245

 Score = 41.4 bits (95), Expect = 0.040,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 23/48 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           + G ++  NV+ + E       NR + A ++ +K + D+      LLR
Sbjct: 196 SGGFLEGSNVSAVSEMMSSIAMNRQFEAQIKMMKTAEDISDAGNRLLR 243


>gi|300817269|ref|ZP_07097487.1| flagellar basal body rod protein FlgF [Escherichia coli MS 107-1]
 gi|307313518|ref|ZP_07593139.1| fagellar hook-basal body protein [Escherichia coli W]
 gi|300530245|gb|EFK51307.1| flagellar basal body rod protein FlgF [Escherichia coli MS 107-1]
 gi|306906686|gb|EFN37197.1| fagellar hook-basal body protein [Escherichia coli W]
 gi|315059543|gb|ADT73870.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli W]
 gi|323379898|gb|ADX52166.1| fagellar hook-basal body protein [Escherichia coli KO11]
          Length = 245

 Score = 41.4 bits (95), Expect = 0.040,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 23/48 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           + G ++  NV+ + E       NR + A ++ +K + D+      LLR
Sbjct: 196 SGGFLEGSNVSAVSEMMSSIAMNRQFEAQIKMMKTAEDISDAGNRLLR 243


>gi|292492364|ref|YP_003527803.1| flagellar basal-body rod protein FlgF [Nitrosococcus halophilus
           Nc4]
 gi|291580959|gb|ADE15416.1| flagellar basal-body rod protein FlgF [Nitrosococcus halophilus
           Nc4]
          Length = 246

 Score = 41.4 bits (95), Expect = 0.040,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 28/58 (48%)

Query: 76  EFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
                  V+ ASG+++  NVN +    +M    R Y   ++ ++ + D+  ++  +LR
Sbjct: 187 VAPAEASVSLASGMLEASNVNGVDAMVEMIALARQYEMQVKMMQAAEDLDASSAQMLR 244


>gi|205356101|ref|ZP_03222868.1| putative flagellar hooK associated protein [Campylobacter jejuni
           subsp. jejuni CG8421]
 gi|205345944|gb|EDZ32580.1| putative flagellar hooK associated protein [Campylobacter jejuni
           subsp. jejuni CG8421]
          Length = 608

 Score = 41.4 bits (95), Expect = 0.040,   Method: Composition-based stats.
 Identities = 19/109 (17%), Positives = 29/109 (26%), Gaps = 2/109 (1%)

Query: 26  SENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVAN 85
             ++AN          + Y          M         KI  D             + N
Sbjct: 499 GNDMANKIIQLQYEKVNFYNEDGTIDNLTMEEYYRKLTGKIASDGENNNVVNSSNETLYN 558

Query: 86  A--SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  S       VN   E A + +    Y A  + +     M+ T L L 
Sbjct: 559 SVYSEYQSKSGVNTNEELAALIQYQSSYGAAAKIVSTVDQMLDTLLGLK 607



 Score = 35.6 bits (80), Expect = 2.1,   Method: Composition-based stats.
 Identities = 11/72 (15%), Positives = 21/72 (29%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            +  + +   +GL     ++     NI+NA  T  T                +    G 
Sbjct: 1  MGIFGTLYTGVTGLKASEVQIATTGNNISNANATFYTRQRVVQTTNGYITTGGVQVGTGT 60

Query: 62 RVKKIGVDQSTF 73
           V+ I      +
Sbjct: 61 AVESIVRLHDEY 72


>gi|157415691|ref|YP_001482947.1| flagellar hook-associated protein FlgK [Campylobacter jejuni subsp.
           jejuni 81116]
 gi|157386655|gb|ABV52970.1| flagellar hook-associated protein FlgK, putative [Campylobacter
           jejuni subsp. jejuni 81116]
 gi|307748332|gb|ADN91602.1| Putative flagellar hook-associated protein FlgK [Campylobacter
           jejuni subsp. jejuni M1]
 gi|315930976|gb|EFV09951.1| flagellar hook-associated protein FlgK [Campylobacter jejuni subsp.
           jejuni 327]
          Length = 608

 Score = 41.4 bits (95), Expect = 0.040,   Method: Composition-based stats.
 Identities = 19/109 (17%), Positives = 29/109 (26%), Gaps = 2/109 (1%)

Query: 26  SENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVAN 85
             ++AN          + Y          M         KI  D             + N
Sbjct: 499 GNDMANKIIQLQYEKVNFYNEDGTIDNLTMEEYYRKLTGKIASDGENNNVVNSSNETLYN 558

Query: 86  A--SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  S       VN   E A + +    Y A  + +     M+ T L L 
Sbjct: 559 SVYSEYQSKSGVNTNEELAALIQYQSSYGAAAKIVSTVDQMLDTLLGLK 607



 Score = 35.6 bits (80), Expect = 2.1,   Method: Composition-based stats.
 Identities = 11/72 (15%), Positives = 21/72 (29%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            +  + +   +GL     ++     NI+NA  T  T                +    G 
Sbjct: 1  MGIFGTLYTGVTGLKASEVQIATTGNNISNANATFYTRQRVVQTTNGYITTGGVQVGTGT 60

Query: 62 RVKKIGVDQSTF 73
           V+ I      +
Sbjct: 61 AVESIVRLHDEY 72


>gi|147678427|ref|YP_001212642.1| flagellar basal body protein [Pelotomaculum thermopropionicum SI]
 gi|146274524|dbj|BAF60273.1| flagellar basal body protein [Pelotomaculum thermopropionicum SI]
          Length = 133

 Score = 41.4 bits (95), Expect = 0.040,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 48/121 (39%), Gaps = 2/121 (1%)

Query: 14  GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTF 73
           GL   + R ++I+ NIANA T G    S              +  G        + ++  
Sbjct: 13  GLDAAALRHRVIANNIANANTPGFK-KSAVEFESLFKEALGRNPVGMAVTHPRHMGKAPL 71

Query: 74  VEEFDPGHPVANASGI-VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           + E  P   + NA+ +     NV++  E  ++   +  Y A  + + + + +++  +   
Sbjct: 72  LSELQPVEKINNATSMRTDGNNVDIDEEMVNLAANDIHYQAMARELSERYALLSYVITGG 131

Query: 133 R 133
           R
Sbjct: 132 R 132


>gi|86151883|ref|ZP_01070096.1| flagellar hook-associated protein FlgK, putative [Campylobacter
           jejuni subsp. jejuni 260.94]
 gi|315124902|ref|YP_004066906.1| flagellar hook-associated protein FlgK, putative [Campylobacter
           jejuni subsp. jejuni ICDCCJ07001]
 gi|85840991|gb|EAQ58240.1| flagellar hook-associated protein FlgK, putative [Campylobacter
           jejuni subsp. jejuni 260.94]
 gi|315018624|gb|ADT66717.1| flagellar hook-associated protein FlgK, putative [Campylobacter
           jejuni subsp. jejuni ICDCCJ07001]
          Length = 608

 Score = 41.4 bits (95), Expect = 0.040,   Method: Composition-based stats.
 Identities = 19/109 (17%), Positives = 29/109 (26%), Gaps = 2/109 (1%)

Query: 26  SENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVAN 85
             ++AN          + Y          M         KI  D             + N
Sbjct: 499 GNDMANKIIQLQYEKVNFYNEDGTIDNLTMEEYYRKLTGKIASDGENNNVVNSSNETLYN 558

Query: 86  A--SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  S       VN   E A + +    Y A  + +     M+ T L L 
Sbjct: 559 SVYSEYQSKSGVNTNEELAALIQYQSSYGAAAKIVSTVDQMLDTLLGLK 607



 Score = 35.6 bits (80), Expect = 2.1,   Method: Composition-based stats.
 Identities = 11/72 (15%), Positives = 21/72 (29%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            +  + +   +GL     ++     NI+NA  T  T                +    G 
Sbjct: 1  MGIFGTLYTGVTGLKASEVQIATTGNNISNANATFYTRQRVVQTTNGYITTGGVQVGTGT 60

Query: 62 RVKKIGVDQSTF 73
           V+ I      +
Sbjct: 61 AVESIVRLHDEY 72


>gi|150019059|ref|YP_001311313.1| flagellar basal body rod protein FlgG [Clostridium beijerinckii
           NCIMB 8052]
 gi|149905524|gb|ABR36357.1| flagellar basal body rod protein [Clostridium beijerinckii NCIMB
           8052]
          Length = 256

 Score = 41.4 bits (95), Expect = 0.040,   Method: Composition-based stats.
 Identities = 10/58 (17%), Positives = 20/58 (34%), Gaps = 1/58 (1%)

Query: 77  FDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL-DLLR 133
                 V      ++  NV+   E   + E  R +  N + +K   + +     +L R
Sbjct: 198 PIYNAKVNVRQNFLESSNVDPSTELVKLMEIKRQFETNQKFVKMQDETVQKAASELGR 255


>gi|325274798|ref|ZP_08140826.1| flagellar basal body rod protein FlgF [Pseudomonas sp. TJI-51]
 gi|324100066|gb|EGB97884.1| flagellar basal body rod protein FlgF [Pseudomonas sp. TJI-51]
          Length = 246

 Score = 41.4 bits (95), Expect = 0.040,   Method: Composition-based stats.
 Identities = 9/49 (18%), Positives = 22/49 (44%), Gaps = 3/49 (6%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS---HDMMTTTLDLL 132
           SG ++  NVN + E   +   +R +  +++ +  +    + M   L + 
Sbjct: 198 SGFLEGSNVNAVEEMTSVLALSRQFELHVKMMNTAKEGDEAMARVLQIG 246


>gi|283956843|ref|ZP_06374316.1| putative flagellar hook-associated protein FlgK [Campylobacter
           jejuni subsp. jejuni 1336]
 gi|283791569|gb|EFC30365.1| putative flagellar hook-associated protein FlgK [Campylobacter
           jejuni subsp. jejuni 1336]
          Length = 608

 Score = 41.4 bits (95), Expect = 0.040,   Method: Composition-based stats.
 Identities = 19/109 (17%), Positives = 29/109 (26%), Gaps = 2/109 (1%)

Query: 26  SENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVAN 85
             ++AN          + Y          M         KI  D             + N
Sbjct: 499 GNDMANKIIQLQYEKVNFYNEDGTIDNLTMEEYYRKLTGKIASDGENNNVVNSSNETLYN 558

Query: 86  A--SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  S       VN   E A + +    Y A  + +     M+ T L L 
Sbjct: 559 SVYSEYQSKSGVNTNEELAALIQYQSSYGAAAKIVSTVDQMLDTLLGLK 607



 Score = 34.8 bits (78), Expect = 4.1,   Method: Composition-based stats.
 Identities = 10/72 (13%), Positives = 21/72 (29%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            +  + +   +GL     ++     NI+NA  T  T                +    G 
Sbjct: 1  MGIFGTLYTGVTGLKASEVQIATTGNNISNANATFYTRQRVVQTTNGYITTGGVQVGTGT 60

Query: 62 RVKKIGVDQSTF 73
           ++ I      +
Sbjct: 61 AIESIVRLHDEY 72


>gi|312112590|ref|YP_003990906.1| fagellar hook-basal body protein [Geobacillus sp. Y4.1MC1]
 gi|311217691|gb|ADP76295.1| fagellar hook-basal body protein [Geobacillus sp. Y4.1MC1]
          Length = 285

 Score = 41.4 bits (95), Expect = 0.040,   Method: Composition-based stats.
 Identities = 14/69 (20%), Positives = 27/69 (39%), Gaps = 1/69 (1%)

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           +           +    +    G ++  NV++  E  DM  T R Y  N ++I  S  M+
Sbjct: 217 VNAADVAVNMTGNLRAQIGMTQGALEQSNVDLGTELTDMMITERSYQLNARSISISDQML 276

Query: 126 TTTLDLLRD 134
              ++ +R 
Sbjct: 277 G-LINGIRS 284


>gi|148925638|ref|ZP_01809326.1| putative flagellar hook-associated protein [Campylobacter jejuni
           subsp. jejuni CG8486]
 gi|145845648|gb|EDK22739.1| putative flagellar hook-associated protein [Campylobacter jejuni
           subsp. jejuni CG8486]
          Length = 608

 Score = 41.4 bits (95), Expect = 0.040,   Method: Composition-based stats.
 Identities = 19/109 (17%), Positives = 29/109 (26%), Gaps = 2/109 (1%)

Query: 26  SENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVAN 85
             ++AN          + Y          M         KI  D             + N
Sbjct: 499 GNDMANKIIQLQYEKVNFYNEDGTIDNLTMEEYYRKLTGKIASDGENNNVVNSSNETLYN 558

Query: 86  A--SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  S       VN   E A + +    Y A  + +     M+ T L L 
Sbjct: 559 SVYSEYQSKSGVNTNEELAALIQYQSSYGAAAKIVSTVDQMLDTLLGLK 607



 Score = 34.8 bits (78), Expect = 4.1,   Method: Composition-based stats.
 Identities = 10/72 (13%), Positives = 21/72 (29%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            +  + +   +GL     ++     NI+NA  T  T                +    G 
Sbjct: 1  MGIFGTLYTGVTGLKASEVQIATTGNNISNANATFYTRQRVVQTTNGYITTGGVQVGTGT 60

Query: 62 RVKKIGVDQSTF 73
           ++ I      +
Sbjct: 61 AIESIVRLHDEY 72


>gi|327398889|ref|YP_004339758.1| flagellar hook-basal body protein [Hippea maritima DSM 10411]
 gi|327181518|gb|AEA33699.1| flagellar hook-basal body protein [Hippea maritima DSM 10411]
          Length = 264

 Score = 41.4 bits (95), Expect = 0.041,   Method: Composition-based stats.
 Identities = 11/59 (18%), Positives = 22/59 (37%), Gaps = 4/59 (6%)

Query: 77  FDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL-DLLRD 134
             P        G ++  NV ++ E   + E+ R +    + I     +    L D+ R+
Sbjct: 204 PIPAPNTFLKEGYLEMSNVTIVNEMVKLIESQRNFERYQRVI---DSLGNELLSDIARN 259


>gi|304409977|ref|ZP_07391596.1| flagellar basal-body rod protein FlgF [Shewanella baltica OS183]
 gi|307302310|ref|ZP_07582068.1| flagellar basal-body rod protein FlgF [Shewanella baltica BA175]
 gi|304351386|gb|EFM15785.1| flagellar basal-body rod protein FlgF [Shewanella baltica OS183]
 gi|306914348|gb|EFN44769.1| flagellar basal-body rod protein FlgF [Shewanella baltica BA175]
          Length = 247

 Score = 41.4 bits (95), Expect = 0.041,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 23/48 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            SG V+  NVN + E   + +  R +   ++ +K + +    +  L+R
Sbjct: 198 ESGAVEGSNVNPVDEMVSLIDLQRQFELQVKMMKTAEENDRASSSLMR 245


>gi|290474973|ref|YP_003467857.1| flagellar basal body rod cell-proximal protein [Xenorhabdus
           bovienii SS-2004]
 gi|289174290|emb|CBJ81080.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
           [Xenorhabdus bovienii SS-2004]
          Length = 251

 Score = 41.4 bits (95), Expect = 0.041,   Method: Composition-based stats.
 Identities = 9/47 (19%), Positives = 19/47 (40%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
             G+++  NVN +    +M    R +   ++ I  S +       +L
Sbjct: 202 MPGVLEGSNVNPVESMVNMIANARRFEMQMKVIHSSDENAQRANQIL 248


>gi|86153170|ref|ZP_01071375.1| flagellar hook-associated protein FlgK [Campylobacter jejuni subsp.
           jejuni HB93-13]
 gi|85844055|gb|EAQ61265.1| flagellar hook-associated protein FlgK [Campylobacter jejuni subsp.
           jejuni HB93-13]
          Length = 608

 Score = 41.4 bits (95), Expect = 0.041,   Method: Composition-based stats.
 Identities = 19/109 (17%), Positives = 29/109 (26%), Gaps = 2/109 (1%)

Query: 26  SENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVAN 85
             ++AN          + Y          M         KI  D             + N
Sbjct: 499 GNDMANKIIQLQYEKVNFYNEDGTIDNLTMEEYYRKLTGKIASDGENNNVVNSSNETLYN 558

Query: 86  A--SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  S       VN   E A + +    Y A  + +     M+ T L L 
Sbjct: 559 SVYSEYQSKSGVNTNEELAALIQYQSSYGAAAKIVSTVDQMLDTLLGLK 607



 Score = 34.8 bits (78), Expect = 4.1,   Method: Composition-based stats.
 Identities = 10/72 (13%), Positives = 21/72 (29%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            +  + +   +GL     ++     NI+NA  T  T                +    G 
Sbjct: 1  MGIFGTLYTGVTGLKASEVQIATTGNNISNANATFYTRQRVVQTTNGYITTGGVQVGTGT 60

Query: 62 RVKKIGVDQSTF 73
           ++ I      +
Sbjct: 61 AIESIVRLHDEY 72


>gi|182418416|ref|ZP_02949710.1| flagellar basal-body rod protein FlgG [Clostridium butyricum 5521]
 gi|237666817|ref|ZP_04526802.1| flagellar basal body rod protein [Clostridium butyricum E4 str.
           BoNT E BL5262]
 gi|182377798|gb|EDT75342.1| flagellar basal-body rod protein FlgG [Clostridium butyricum 5521]
 gi|237658016|gb|EEP55571.1| flagellar basal body rod protein [Clostridium butyricum E4 str.
           BoNT E BL5262]
          Length = 259

 Score = 41.4 bits (95), Expect = 0.041,   Method: Composition-based stats.
 Identities = 11/58 (18%), Positives = 21/58 (36%), Gaps = 1/58 (1%)

Query: 77  FDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT-TLDLLR 133
                 V      ++  NV+   E   + +  R +  N + IK   + +   T +L R
Sbjct: 201 PIYNARVNVVQNALESSNVDSTDEMIKLMQVKRQFETNQKFIKMQDETVQKATTELGR 258


>gi|118581848|ref|YP_903098.1| flagellar basal body rod protein [Pelobacter propionicus DSM 2379]
 gi|118504558|gb|ABL01041.1| flagellar basal body rod protein [Pelobacter propionicus DSM 2379]
          Length = 245

 Score = 41.4 bits (95), Expect = 0.041,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 23/57 (40%)

Query: 74  VEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            +        +   G ++  NV+ + E   M ET R + A  + IK   DM+    +
Sbjct: 184 PQATPQAATGSIRQGQLEGSNVDTITEMVQMIETTRYFDACQRVIKGFDDMVGKAAN 240



 Score = 37.9 bits (86), Expect = 0.52,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 20/68 (29%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          + +  + A SG      RM  IS N+AN  T G       +                   
Sbjct: 1  MNSGMYAALSGSIAAMKRMDTISNNLANVNTPGFKKDKMLFESMLAGTSNPPAVPQSSTA 60

Query: 64 KKIGVDQS 71
            I   +S
Sbjct: 61 DPIMQKES 68


>gi|302383955|ref|YP_003819778.1| flagellar basal-body rod protein FlgF [Brevundimonas subvibrioides
           ATCC 15264]
 gi|302194583|gb|ADL02155.1| flagellar basal-body rod protein FlgF [Brevundimonas subvibrioides
           ATCC 15264]
          Length = 245

 Score = 41.4 bits (95), Expect = 0.042,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 1/52 (1%)

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD-LLRD 134
               G+++  NVN LVE  ++ E  R Y    + I+   D+   +++ L R 
Sbjct: 193 QVRQGMLEGSNVNTLVEITNLIEITRAYERATKMIENVQDLSRRSVERLGRS 244


>gi|161503734|ref|YP_001570846.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160865081|gb|ABX21704.1| hypothetical protein SARI_01819 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 251

 Score = 41.4 bits (95), Expect = 0.042,   Method: Composition-based stats.
 Identities = 13/102 (12%), Positives = 29/102 (28%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           N     +T       +   +    +        +     Q++          +   SG++
Sbjct: 147 NPGDPPNTVAPVGQLKLVKAEGHEVQRGDDGLFRLTADAQASRGAVLAADPSIRIMSGVL 206

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NV  +    DM    R +   ++ I    +       LL
Sbjct: 207 EGSNVKPVEAMTDMIANARRFEMQMKVITSVDENEGRANQLL 248


>gi|295400718|ref|ZP_06810695.1| fagellar hook-basal body protein [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|294977299|gb|EFG52900.1| fagellar hook-basal body protein [Geobacillus thermoglucosidasius
           C56-YS93]
          Length = 285

 Score = 41.4 bits (95), Expect = 0.042,   Method: Composition-based stats.
 Identities = 14/69 (20%), Positives = 27/69 (39%), Gaps = 1/69 (1%)

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           +           +    +    G ++  NV++  E  DM  T R Y  N ++I  S  M+
Sbjct: 217 VNAADVAVNMTGNLRAQIGMTQGALEQSNVDLGTELTDMMITERSYQLNARSISISDQML 276

Query: 126 TTTLDLLRD 134
              ++ +R 
Sbjct: 277 G-LINGIRS 284


>gi|307945665|ref|ZP_07661001.1| flagellar basal-body rod protein FlgF [Roseibium sp. TrichSKD4]
 gi|307771538|gb|EFO30763.1| flagellar basal-body rod protein FlgF [Roseibium sp. TrichSKD4]
          Length = 246

 Score = 41.4 bits (95), Expect = 0.042,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 23/56 (41%), Gaps = 1/56 (1%)

Query: 79  PGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD-LLR 133
           P   V    G ++  NV  +VE   + E  R Y    + IK + ++    +  L R
Sbjct: 188 PNAKVRVTQGAIEQSNVEGVVEVTRLIEITRAYTTVSKMIKDADELRQKAISTLGR 243


>gi|302390139|ref|YP_003825960.1| flagellar hook-associated protein FlgK [Thermosediminibacter oceani
           DSM 16646]
 gi|302200767|gb|ADL08337.1| flagellar hook-associated protein FlgK [Thermosediminibacter oceani
           DSM 16646]
          Length = 465

 Score = 41.4 bits (95), Expect = 0.042,   Method: Composition-based stats.
 Identities = 22/139 (15%), Positives = 52/139 (37%), Gaps = 11/139 (7%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDP--------YRRKTISFEE 53
           D+ I +  ++ S L+V  + +  + + IA A+     PG +            K  +   
Sbjct: 321 DFFIYNNSLSGSILSVNQSILNDVKK-IAAAQDPDAVPGDNRNALKLADLKYMKLTTLGG 379

Query: 54  VMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKY--PNVNVLVETADMRETNRLY 111
            +    G  + ++G+D    +   +    + +     +    +V++  E + M      Y
Sbjct: 380 TLDEYYGSLIARLGIDSQQSIRMTESQEFMVSQLDEQRKAVSSVSLDEEMSRMIMYQHAY 439

Query: 112 MANLQTIKQSHDMMTTTLD 130
            A  + I    +M+ T + 
Sbjct: 440 NAAARMITAIDEMLDTIVS 458



 Score = 36.0 bits (81), Expect = 1.7,   Method: Composition-based stats.
 Identities = 18/78 (23%), Positives = 25/78 (32%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M        IA   L  Q    + +S N+ANA T G +                M+ + G
Sbjct: 1  MYSSFFGIEIAKRALFAQQRAQENVSHNVANANTPGYSRQRPVMEATYTKPWAGMYTAAG 60

Query: 61 VRVKKIGVDQSTFVEEFD 78
                GV  +  V   D
Sbjct: 61 AVQAGTGVRVADIVRIRD 78


>gi|71906397|ref|YP_283984.1| flagellar hook-associated protein FlgK [Dechloromonas aromatica
           RCB]
 gi|71846018|gb|AAZ45514.1| Protein of unknown function DUF1078 [Dechloromonas aromatica RCB]
          Length = 683

 Score = 41.4 bits (95), Expect = 0.042,   Method: Composition-based stats.
 Identities = 16/99 (16%), Positives = 28/99 (28%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +     IA +G+    A +   + NI+N  T G T                     G  V
Sbjct: 1   MSGLISIAVTGINAAQAGLLTTTNNISNLNTEGYTRQRVVQASNPTVMTGAGGFGQGAHV 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETA 102
             +    S  +           +S    Y  V+++    
Sbjct: 61  VTVERMYSEALNRQVLNAQAKVSSLDTYYGQVSLIDNML 99


>gi|90422600|ref|YP_530970.1| flagellar basal body rod protein FlgF [Rhodopseudomonas palustris
           BisB18]
 gi|90104614|gb|ABD86651.1| flagellar basal body rod protein [Rhodopseudomonas palustris
           BisB18]
          Length = 243

 Score = 41.4 bits (95), Expect = 0.042,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 17/45 (37%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             G V+  NV+ L E   +    R + +    I+ S   M   + 
Sbjct: 191 QQGYVEGSNVDPLSEMTQLMTATRAFQSVSSLIESSEGTMQNAIR 235


>gi|317133467|ref|YP_004092781.1| flagellar hook-basal body protein [Ethanoligenens harbinense
           YUAN-3]
 gi|315471446|gb|ADU28050.1| flagellar hook-basal body protein [Ethanoligenens harbinense
           YUAN-3]
          Length = 239

 Score = 41.4 bits (95), Expect = 0.043,   Method: Composition-based stats.
 Identities = 9/44 (20%), Positives = 18/44 (40%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            G V+  NVN + +   + E +R + +  Q      D +   + 
Sbjct: 190 QGYVEKSNVNTVTDMTGLMEASRAFQSCQQAYNTGTDTLDKLVT 233



 Score = 40.2 bits (92), Expect = 0.087,   Method: Composition-based stats.
 Identities = 21/95 (22%), Positives = 34/95 (35%), Gaps = 9/95 (9%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR-------RKTISFEEVMH 56
          +I     A SG+  QS R+ ++  N+ NA + G    +   R        +T     V  
Sbjct: 1  MIRGIFSAASGMIAQSDRINVMGNNLDNADSQGFKSDTATLRSFDEELALRTTDAVPVGT 60

Query: 57 GSGGVRVKKIGVD--QSTFVEEFDPGHPVANASGI 89
           + GV V  +  D  Q    +     +   N  G 
Sbjct: 61 LNAGVHVSGVETDLSQGELQQTGSSYNIAVNGGGF 95


>gi|308175374|ref|YP_003922079.1| flagellar basal-body rod protein [Bacillus amyloliquefaciens DSM 7]
 gi|307608238|emb|CBI44609.1| putative flagellar basal-body rod protein [Bacillus
           amyloliquefaciens DSM 7]
 gi|328555348|gb|AEB25840.1| flagellar basal-body rod protein [Bacillus amyloliquefaciens TA208]
 gi|328913716|gb|AEB65312.1| putative flagellar basal-body rod protein [Bacillus
           amyloliquefaciens LL3]
          Length = 265

 Score = 41.4 bits (95), Expect = 0.043,   Method: Composition-based stats.
 Identities = 18/103 (17%), Positives = 34/103 (33%), Gaps = 2/103 (1%)

Query: 33  RTTGDTPGSDPYRRKTISFEEVMH-GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVK 91
             T  + G    R      E+V +    G  +              +P    +   G+ +
Sbjct: 162 NGTVTSNGRQAGRIDIRMEEDVRNLKRDGNDLYSTADGSELPSAAANPQVSYSLKQGVSE 221

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSH-DMMTTTLDLLR 133
             NV+V     +M E  R + AN + I+     M     ++ +
Sbjct: 222 LSNVDVTSTYTEMTEAYRSFEANQKVIQAYDKSMDKAANEIGK 264



 Score = 36.4 bits (82), Expect = 1.3,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 26/63 (41%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++   + A S +  Q  R +++S NIANA T+G        R         + G    ++
Sbjct: 1  MLKGLYTATSAMITQQRRTEMLSNNIANANTSGYKEDQGSIRAFPEMLLSRIEGDKKTKI 60

Query: 64 KKI 66
            +
Sbjct: 61 GSV 63


>gi|255767784|ref|NP_391520.2| flagellar hook-basal body protein [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|254763418|sp|P39753|FLHP_BACSU RecName: Full=Flagellar hook-basal body complex protein flhP
 gi|225185412|emb|CAB15656.2| putative flagellar hook-basal body protein [Bacillus subtilis
           subsp. subtilis str. 168]
          Length = 269

 Score = 41.4 bits (95), Expect = 0.043,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 19/43 (44%)

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
               G ++  NV++  +  D+  + R Y  N +TI     M+ 
Sbjct: 221 GMQQGSLEMSNVDISEQMTDLITSQRSYQLNSRTITMGDQMLG 263


>gi|149184208|ref|ZP_01862526.1| Flagellar basal-body rod FlgF [Erythrobacter sp. SD-21]
 gi|148831528|gb|EDL49961.1| Flagellar basal-body rod FlgF [Erythrobacter sp. SD-21]
          Length = 246

 Score = 41.4 bits (95), Expect = 0.044,   Method: Composition-based stats.
 Identities = 14/100 (14%), Positives = 31/100 (31%), Gaps = 2/100 (2%)

Query: 34  TTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
               TP   P +   I             +  +   +   +         +  +G ++  
Sbjct: 147 ADPTTPDQPPAKIGRIKMASWEGSPISKTLDGLFRVEGGGIL--PTDETASLKTGALEQS 204

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           NV       +M E  RL+    + +  + ++  +   LLR
Sbjct: 205 NVKTTEVLVEMIEAQRLFAMRTKIVSTAKEIDESGSQLLR 244



 Score = 34.1 bits (76), Expect = 7.4,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 31/70 (44%), Gaps = 5/70 (7%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          MD L    H A SG+       ++I+ N+ANA T G         ++ ++ E   + +  
Sbjct: 1  MDRL---IHTALSGMRASMDSQRVIASNMANANTLGFRAEL--LDQRPVTIEGQPNEARA 55

Query: 61 VRVKKIGVDQ 70
          +++ ++    
Sbjct: 56 MQIARVRGAD 65


>gi|146307863|ref|YP_001188328.1| flagellar hook-associated protein FlgK [Pseudomonas mendocina ymp]
 gi|145576064|gb|ABP85596.1| flagellar hook-associated protein FlgK [Pseudomonas mendocina ymp]
          Length = 681

 Score = 41.4 bits (95), Expect = 0.044,   Method: Composition-based stats.
 Identities = 20/116 (17%), Positives = 35/116 (30%), Gaps = 6/116 (5%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +    +I  SGL+     + +   NI N  T G +        +T  F    +   G  +
Sbjct: 1   MADLLNIGLSGLSASKTSLAVTGHNIVNVNTPGFSRQEAVQTTRTPQFSGAGYIGSGTTL 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET------NRLYMA 113
             +    + F+          N+        +N L        T       RL+ A
Sbjct: 61  VDVRRIYNEFLNTQVRSSTALNSDTQAYLSQINQLDSLLAGSTTGVTPGLQRLFAA 116


>gi|71906392|ref|YP_283979.1| hypothetical protein Daro_0753 [Dechloromonas aromatica RCB]
 gi|71846013|gb|AAZ45509.1| Protein of unknown function DUF1078 [Dechloromonas aromatica RCB]
          Length = 247

 Score = 41.4 bits (95), Expect = 0.044,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 18/43 (41%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           ++  NVNV     ++   +R +   ++ ++ +         LL
Sbjct: 201 LEGSNVNVTDAMVNLISLSRQFEMQIKLLQTADTNAQRADQLL 243


>gi|319944134|ref|ZP_08018412.1| flagellar basal-body rod protein FlgF [Lautropia mirabilis ATCC
           51599]
 gi|319742628|gb|EFV95037.1| flagellar basal-body rod protein FlgF [Lautropia mirabilis ATCC
           51599]
          Length = 245

 Score = 41.4 bits (95), Expect = 0.046,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 21/57 (36%)

Query: 76  EFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           E      V    G V+  NVNV+     M E  R +   ++ ++ +         +L
Sbjct: 185 EAPVSDSVRVVQGAVEGSNVNVVESMVGMIEVQRQFEMQMKLLQTAESNEQRASQIL 241


>gi|297531376|ref|YP_003672651.1| flagellar hook-associated protein FlgK [Geobacillus sp. C56-T3]
 gi|297254628|gb|ADI28074.1| flagellar hook-associated protein FlgK [Geobacillus sp. C56-T3]
          Length = 531

 Score = 41.4 bits (95), Expect = 0.046,   Method: Composition-based stats.
 Identities = 17/133 (12%), Positives = 42/133 (31%), Gaps = 12/133 (9%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK--- 65
           +IA S  + ++      + N+AN R+   +  +   +         ++        +   
Sbjct: 393 NIAASTKSGETGNGNN-AINLANVRSLLLSNATVSLQDGISVNLASLNLPLSSGTVETNY 451

Query: 66  ---IGVDQSTFVEEFDPGHPVANASGIVKY-----PNVNVLVETADMRETNRLYMANLQT 117
              IG       +              V+       +V++  E  +M +    Y A  + 
Sbjct: 452 QGWIGQLGVDGEQANRMKTNSETLRQSVEEKRQSVSSVSLDEEMMNMIKYQHAYNAAARQ 511

Query: 118 IKQSHDMMTTTLD 130
           I    +M+   ++
Sbjct: 512 ITVIDEMLDKLIN 524



 Score = 39.5 bits (90), Expect = 0.16,   Method: Composition-based stats.
 Identities = 18/79 (22%), Positives = 26/79 (32%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M         A  G+  Q A +   S NIANA T G T      R  +      ++    
Sbjct: 1  MLSTFHGLEAARRGMMAQQAALYTTSHNIANANTEGYTRQRVQLRPTSPFPTPGLNRPNI 60

Query: 61 VRVKKIGVDQSTFVEEFDP 79
                GV+ S+     + 
Sbjct: 61 PGQMGTGVEASSVERVREY 79


>gi|295707198|ref|YP_003600273.1| flagellar hook-basal body complex protein FlhP [Bacillus megaterium
           DSM 319]
 gi|294804857|gb|ADF41923.1| flagellar hook-basal body complex protein FlhP [Bacillus megaterium
           DSM 319]
          Length = 273

 Score = 41.4 bits (95), Expect = 0.046,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 19/42 (45%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           ++  NV++  E  DM    R Y  N ++I  +  MM     +
Sbjct: 230 LEQSNVDLSKELTDMSIAQRAYQFNSRSISIADQMMGLVNGI 271


>gi|167623362|ref|YP_001673656.1| flagellar basal body rod protein FlgF [Shewanella halifaxensis
           HAW-EB4]
 gi|167353384|gb|ABZ75997.1| flagellar basal-body rod protein FlgF [Shewanella halifaxensis
           HAW-EB4]
          Length = 247

 Score = 41.4 bits (95), Expect = 0.046,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 21/44 (47%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           V+  NVN + E   M +  R +   ++ +K + +    +  L+R
Sbjct: 202 VEGSNVNAVHEMVSMIDLQRQFEMQVKMMKTAEENDRASSSLMR 245


>gi|292669735|ref|ZP_06603161.1| flagellar basal-body rod protein FlgB [Selenomonas noxia ATCC
           43541]
 gi|292648532|gb|EFF66504.1| flagellar basal-body rod protein FlgB [Selenomonas noxia ATCC
           43541]
          Length = 140

 Score = 41.4 bits (95), Expect = 0.047,   Method: Composition-based stats.
 Identities = 20/135 (14%), Positives = 48/135 (35%), Gaps = 8/135 (5%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
             +  I +  +A  S R +++S NIAN  T         + R     ++ +       +K
Sbjct: 8   TPTIDIGSRAMAAASLRHEVLSNNIANVNTPYFRRS---HVRFEDLLKQELGMDSDPLMK 64

Query: 65  KIGVDQSTFV-----EEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
            +             +        A  +  +   NV++ +E A++ +    Y A    + 
Sbjct: 65  VVRTHDRHLPAAFHGKARAVIEQDATTNMRLDGNNVDIDIEMAEVAKNQLYYSALANALG 124

Query: 120 QSHDMMTTTLDLLRD 134
              + + T ++  ++
Sbjct: 125 GHINKLKTVINSGQN 139


>gi|160901818|ref|YP_001567399.1| flagellar basal body rod protein [Petrotoga mobilis SJ95]
 gi|160359462|gb|ABX31076.1| flagellar basal body rod protein [Petrotoga mobilis SJ95]
          Length = 240

 Score = 41.4 bits (95), Expect = 0.047,   Method: Composition-based stats.
 Identities = 10/56 (17%), Positives = 20/56 (35%)

Query: 76  EFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           E           G ++  NV+ L E   M E NR +    + +     +    +++
Sbjct: 181 ELGQAGNFNMRQGFLESSNVDALNEMIKMIEANRKFDILQKAVLTGDSLNAKLIEI 236


>gi|222053739|ref|YP_002536101.1| flagellar hook-associated protein FlgK [Geobacter sp. FRC-32]
 gi|221563028|gb|ACM19000.1| flagellar hook-associated protein FlgK [Geobacter sp. FRC-32]
          Length = 479

 Score = 41.4 bits (95), Expect = 0.047,   Method: Composition-based stats.
 Identities = 19/106 (17%), Positives = 33/106 (31%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             +     IA  G+A Q   +++ SENIAN  T G +           +        GGV
Sbjct: 1   MGINDIFSIATRGIAAQRQAIEVTSENIANVNTPGYSRQRVIMESGPANIASGFPIGGGV 60

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
            V  +       ++             + K   +  +    +   T
Sbjct: 61  EVVAVQRSYDNLLQTQLVNGNSTYQQNLAKQTALQQVEPLFNEVST 106



 Score = 37.9 bits (86), Expect = 0.45,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 28/73 (38%), Gaps = 2/73 (2%)

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPN--VNVLVETADMRETNRLYMANLQTIKQ 120
           V  +G+D          G         ++  N  V++  E  ++ +  R +    + +  
Sbjct: 407 VSNVGIDVQKAKNTAAQGEAFLKQLNTLRESNAGVSLDEELTNLLKYQRAFEGAARLVTT 466

Query: 121 SHDMMTTTLDLLR 133
             +MM T L ++R
Sbjct: 467 GSEMMDTILAMVR 479


>gi|78044505|ref|YP_359818.1| flagellar hook-associated protein FlgK [Carboxydothermus
           hydrogenoformans Z-2901]
 gi|77996620|gb|ABB15519.1| flagellar hook-associated protein 1 [Carboxydothermus
           hydrogenoformans Z-2901]
          Length = 473

 Score = 41.4 bits (95), Expect = 0.047,   Method: Composition-based stats.
 Identities = 16/118 (13%), Positives = 36/118 (30%), Gaps = 14/118 (11%)

Query: 27  ENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK--------------KIGVDQST 72
            NIA A+T     G        +  +  M   G                    +   ++ 
Sbjct: 349 NNIAAAKTPSPGDGEIALAIAQLKDKLTMTLPGSTTPTATFNDFYRTIISRLGVDAQEAE 408

Query: 73  FVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            + + +        +  ++   V++  E A+M      Y A  + +    +MM   ++
Sbjct: 409 RMYQNEQLLTKNLNNKRMESGGVSIDEEMANMILYQNAYSAAARIVTAIDEMMDIVIN 466



 Score = 39.1 bits (89), Expect = 0.18,   Method: Composition-based stats.
 Identities = 19/76 (25%), Positives = 25/76 (32%), Gaps = 1/76 (1%)

Query: 4  LIA-SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
          +   S   A S L  Q   + I S NIANA T G T     +   T      +       
Sbjct: 1  MFNISLETALSSLRAQQLALDITSHNIANANTPGYTRQRVNFAPNTPFPVPSLFAPMQPG 60

Query: 63 VKKIGVDQSTFVEEFD 78
              GV  ++     D
Sbjct: 61 QVGTGVVVASIERVRD 76


>gi|95929883|ref|ZP_01312624.1| Flagellar hook-associated protein [Desulfuromonas acetoxidans DSM
           684]
 gi|95134179|gb|EAT15837.1| Flagellar hook-associated protein [Desulfuromonas acetoxidans DSM
           684]
          Length = 552

 Score = 41.4 bits (95), Expect = 0.047,   Method: Composition-based stats.
 Identities = 6/39 (15%), Positives = 19/39 (48%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
            V++  E   + +  R + A+ + +    ++M T +++ 
Sbjct: 513 GVSIEEEMISLIKFQRGFEASAKLLSTVDELMVTVINIK 551


>gi|321313186|ref|YP_004205473.1| flagellar basal body rod protein FlgG [Bacillus subtilis BSn5]
 gi|291486214|dbj|BAI87289.1| flagellar hook-basal body protein [Bacillus subtilis subsp. natto
           BEST195]
 gi|320019460|gb|ADV94446.1| flagellar basal body rod protein FlgG [Bacillus subtilis BSn5]
          Length = 269

 Score = 41.4 bits (95), Expect = 0.047,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 19/43 (44%)

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
               G ++  NV++  +  D+  + R Y  N +TI     M+ 
Sbjct: 221 GMQQGSLEMSNVDISEQMTDLITSQRSYQLNSRTITMGDQMLG 263


>gi|300024609|ref|YP_003757220.1| flagellar basal body rod protein [Hyphomicrobium denitrificans ATCC
           51888]
 gi|299526430|gb|ADJ24899.1| flagellar basal body rod protein [Hyphomicrobium denitrificans ATCC
           51888]
          Length = 125

 Score = 41.4 bits (95), Expect = 0.047,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 40/109 (36%), Gaps = 7/109 (6%)

Query: 20  ARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFV-EEFD 78
            R  +IS+N+ANA T G         R   SFE+ M  +  + V                
Sbjct: 19  QRQSVISQNVANANTPG------YKARDVESFEDAMRKAVPMAVTNPDHFSPAGDGLVQA 72

Query: 79  PGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
             +    A  +V   +V++  E     E  R Y  N Q ++    M+ +
Sbjct: 73  RDNDPNQAEVLVSGNDVSLEQEFLKSGEVMRGYSMNTQIMRTFSGMLRS 121


>gi|187935622|ref|YP_001885067.1| flagellar basal body rod protein FlgG [Clostridium botulinum B str.
           Eklund 17B]
 gi|187723775|gb|ACD24996.1| flagellar hook-basal body complex protein FlhP [Clostridium
           botulinum B str. Eklund 17B]
          Length = 256

 Score = 41.4 bits (95), Expect = 0.047,   Method: Composition-based stats.
 Identities = 7/54 (12%), Positives = 21/54 (38%)

Query: 80  GHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            +      G+++  NV+      D+  T R +  + + I  + ++      + +
Sbjct: 203 SNDYNIEQGMLEGSNVDTSEIFTDIISTQRAFQLSSKGITTADEVWGMINGMRK 256


>gi|15964412|ref|NP_384765.1| flagellar basal body rod protein FlgB [Sinorhizobium meliloti 1021]
 gi|307311554|ref|ZP_07591195.1| flagellar basal body rod protein FlgB [Sinorhizobium meliloti
           BL225C]
 gi|307318909|ref|ZP_07598340.1| flagellar basal body rod protein FlgB [Sinorhizobium meliloti AK83]
 gi|3894106|emb|CAA11959.1| flagellar basal-body rod protein [Sinorhizobium meliloti]
 gi|15073589|emb|CAC45231.1| Flagellar basal-body rod protein [Sinorhizobium meliloti 1021]
 gi|306895323|gb|EFN26078.1| flagellar basal body rod protein FlgB [Sinorhizobium meliloti AK83]
 gi|306899571|gb|EFN30200.1| flagellar basal body rod protein FlgB [Sinorhizobium meliloti
           BL225C]
          Length = 126

 Score = 41.4 bits (95), Expect = 0.047,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 36/114 (31%), Gaps = 8/114 (7%)

Query: 19  SARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFD 78
           + R  +++ NIANA T           +    FE V+  +G           +   E   
Sbjct: 18  TVRQNVVAGNIANANTPH------YRAKDVQPFESVLQNTGIQMAATHRAHFTESPEAAH 71

Query: 79  PGHPVANASGIVKYPN--VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
                A     V+     V +  E        R Y  N   +K  H M+  T+ 
Sbjct: 72  VTEVSALDDVAVQQSGNTVALEEELMKTGAIKRDYELNAGLVKSFHRMILMTVR 125


>gi|325109020|ref|YP_004270088.1| fagellar hook-basal body protein [Planctomyces brasiliensis DSM
           5305]
 gi|324969288|gb|ADY60066.1| fagellar hook-basal body protein [Planctomyces brasiliensis DSM
           5305]
          Length = 572

 Score = 41.0 bits (94), Expect = 0.048,   Method: Composition-based stats.
 Identities = 13/86 (15%), Positives = 30/86 (34%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
             S  + +  +GG   ++     + F+            +G ++  N ++     D+   
Sbjct: 487 RFSNPQGLLEAGGTNFQEGVSSGTPFLVTPGNFGAGTIRAGAIELSNTDIGRNLVDLIVA 546

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  Y  N + I     ++   L L R
Sbjct: 547 STNYRGNARVIDSVQQLVDELLLLGR 572


>gi|91976162|ref|YP_568821.1| flagellar basal body rod protein FlgF [Rhodopseudomonas palustris
           BisB5]
 gi|91682618|gb|ABE38920.1| flagellar basal body rod protein [Rhodopseudomonas palustris BisB5]
          Length = 253

 Score = 41.0 bits (94), Expect = 0.048,   Method: Composition-based stats.
 Identities = 20/105 (19%), Positives = 34/105 (32%)

Query: 26  SENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVAN 85
           S NI++        G             V         K+ G   +   +   P      
Sbjct: 142 SINISSDGNVSVLEGVATIDSLRGKLRMVSFARPQSLEKQGGNLFAATSDRGAPDPKAIV 201

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             G V+  NVN ++E   M E  R Y +    ++Q  D+    ++
Sbjct: 202 RQGYVEKSNVNSVLEMTRMIEVTRSYQSVSALLQQESDLQKAAIE 246


>gi|218463663|ref|ZP_03503754.1| hypothetical protein RetlK5_31494 [Rhizobium etli Kim 5]
          Length = 106

 Score = 41.0 bits (94), Expect = 0.049,   Method: Composition-based stats.
 Identities = 20/129 (15%), Positives = 36/129 (27%), Gaps = 32/129 (24%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             +    + A SG+  Q+ R+  I+ NIAN+ T                    +      
Sbjct: 1   MSISGITNTALSGMRAQTTRIGAIANNIANSSTPDYA-----------RLNTSLTAVTSG 49

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
            VK +    +                      +V+   E  D+ E    Y AN    +  
Sbjct: 50  GVKAVVSPTA---------------------SDVDPATELTDLLEAELAYKANAVVFETR 88

Query: 122 HDMMTTTLD 130
              +    +
Sbjct: 89  RGSVGNANE 97


>gi|253574272|ref|ZP_04851614.1| flagellar hook-basal body protein [Paenibacillus sp. oral taxon 786
           str. D14]
 gi|251846749|gb|EES74755.1| flagellar hook-basal body protein [Paenibacillus sp. oral taxon 786
           str. D14]
          Length = 273

 Score = 41.0 bits (94), Expect = 0.050,   Method: Composition-based stats.
 Identities = 18/107 (16%), Positives = 36/107 (33%), Gaps = 3/107 (2%)

Query: 28  NIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEF---DPGHPVA 84
           NI      G T             + ++   G + V   G+D +  + +          +
Sbjct: 165 NILATNGEGTTEVGRIALLTAERPDALVQKDGNLFVLAAGLDPAEAMVDNLSLPQEQRAS 224

Query: 85  NASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
              G ++  NV++    A+M +  R Y    + +     MM    +L
Sbjct: 225 LRQGALEASNVDLTEAMAEMLQVQRAYQLTARALTSGETMMGLANNL 271


>gi|56421672|ref|YP_148990.1| flagellar hook-associated protein FlgK [Geobacillus kaustophilus
           HTA426]
 gi|56381514|dbj|BAD77422.1| flagellar hook-associated protein 1 (HAP1) [Geobacillus
           kaustophilus HTA426]
          Length = 531

 Score = 41.0 bits (94), Expect = 0.050,   Method: Composition-based stats.
 Identities = 17/133 (12%), Positives = 42/133 (31%), Gaps = 12/133 (9%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK--- 65
           +IA S  + ++      + N+AN R+   +  +   +         ++        +   
Sbjct: 393 NIAASTKSGETGNGNN-AINLANVRSLLLSNATVSLQDGISVNLASLNLPLSSGTVETNY 451

Query: 66  ---IGVDQSTFVEEFDPGHPVANASGIVKY-----PNVNVLVETADMRETNRLYMANLQT 117
              IG       +              V+       +V++  E  +M +    Y A  + 
Sbjct: 452 QGWIGQLGVDGEQANRMKSNSEILRQSVEEKRQSVSSVSLDEEMMNMIKFQHAYNAAARQ 511

Query: 118 IKQSHDMMTTTLD 130
           I    +M+   ++
Sbjct: 512 ITVIDEMLDKLIN 524



 Score = 38.7 bits (88), Expect = 0.27,   Method: Composition-based stats.
 Identities = 17/109 (15%), Positives = 31/109 (28%), Gaps = 4/109 (3%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M         A   +  Q A +     NIANA T G T      +         ++    
Sbjct: 1   MLSTFHGLEAARRAMMAQQAALYTTGHNIANANTEGYTRQRVQLKATPPFPTPGLNRPNI 60

Query: 61  VRVKKIGVDQSTFVEEFDP----GHPVANASGIVKYPNVNVLVETADMR 105
                 GV+ S+     +      +   N+         + + +  D+ 
Sbjct: 61  PGQMGTGVEASSVERVREYFLDIQYRGENSKLGYWEARADAVSKMEDIM 109


>gi|163758012|ref|ZP_02165100.1| flagellar basal-body rod protein B [Hoeflea phototrophica DFL-43]
 gi|162284301|gb|EDQ34584.1| flagellar basal-body rod protein B [Hoeflea phototrophica DFL-43]
          Length = 125

 Score = 41.0 bits (94), Expect = 0.050,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 37/112 (33%), Gaps = 5/112 (4%)

Query: 19  SARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFD 78
           + R  +++ NIAN  T G T             +E            I  D        +
Sbjct: 18  TVRQSVVAGNIANVNTPGYTAREVAAF--EAVMQETGTRMAATHPGHIQEDPMRGAVRSE 75

Query: 79  PGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             + V          +VN+  E +   E  R+Y  N   +K  H MM  T+ 
Sbjct: 76  RQNGVEVMPS---GNSVNLPDELSKTGEIKRMYELNAGMVKAFHRMMLLTVR 124


>gi|117923397|ref|YP_864014.1| flagellar hook-associated protein FlgK [Magnetococcus sp. MC-1]
 gi|117607153|gb|ABK42608.1| flagellar hook-associated protein FlgK [Magnetococcus sp. MC-1]
          Length = 588

 Score = 41.0 bits (94), Expect = 0.050,   Method: Composition-based stats.
 Identities = 6/41 (14%), Positives = 21/41 (51%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             V++  E  D+    R + A+ + +  + +++ + + ++R
Sbjct: 548 SGVSLEEELTDLMRFQRAFQASSKMVVTADELLQSVIGMVR 588


>gi|307823531|ref|ZP_07653760.1| fagellar hook-basal body protein [Methylobacter tundripaludum SV96]
 gi|307735516|gb|EFO06364.1| fagellar hook-basal body protein [Methylobacter tundripaludum SV96]
          Length = 597

 Score = 41.0 bits (94), Expect = 0.051,   Method: Composition-based stats.
 Identities = 12/83 (14%), Positives = 25/83 (30%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
                + +   G     K     +         +     S  ++   V++  +   +   
Sbjct: 514 RFQSNQSLAKLGDTAWAKTSSSGAPIYGAAGDNNFGTIQSSALESSTVDLSAQLVKLIIA 573

Query: 108 NRLYMANLQTIKQSHDMMTTTLD 130
            + Y AN QTI     ++ T L 
Sbjct: 574 QQAYQANSQTITTEKTLVETILR 596



 Score = 35.2 bits (79), Expect = 2.7,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 26/65 (40%), Gaps = 3/65 (4%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY---RRKTISFEEVMHGSGGVRV 63
          S   A SGL   S  +Q+   NIAN++T G       +      +I          GV+V
Sbjct: 2  SFATALSGLQAASTNLQVTGNNIANSQTVGFKESRAEFADVYASSIGGVSKTQPGSGVKV 61

Query: 64 KKIGV 68
           ++  
Sbjct: 62 TEVAQ 66


>gi|197120116|ref|YP_002140543.1| flagellar hook-associated protein FlgK [Geobacter bemidjiensis Bem]
 gi|197089476|gb|ACH40747.1| flagellar hook-associated protein FlgK [Geobacter bemidjiensis Bem]
          Length = 482

 Score = 41.0 bits (94), Expect = 0.051,   Method: Composition-based stats.
 Identities = 15/73 (20%), Positives = 31/73 (42%), Gaps = 2/73 (2%)

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPN--VNVLVETADMRETNRLYMANLQTIKQ 120
           V ++GVD          G         ++  N  V++  E  ++ +  R +  + + I  
Sbjct: 410 VSQVGVDTEGTQNVASQGASFLKQLSALRSSNSEVSLDEELTNLTKYQRAFQGSAKVISA 469

Query: 121 SHDMMTTTLDLLR 133
           + DM+ T L ++R
Sbjct: 470 ATDMLDTVLGMVR 482



 Score = 39.9 bits (91), Expect = 0.12,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 26/59 (44%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
            IA+SG+  Q   +++  ENIAN  T G +        K ++         GV++  +
Sbjct: 7  FDIASSGVTAQRLAIEVTGENIANVNTDGYSRQQVIMENKPVTTANGFPLGTGVQIGAV 65


>gi|195940721|ref|ZP_03086103.1| flagellar basal body rod protein FlgF [Escherichia coli O157:H7
           str. EC4024]
          Length = 186

 Score = 41.0 bits (94), Expect = 0.052,   Method: Composition-based stats.
 Identities = 14/102 (13%), Positives = 31/102 (30%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           N     +T       +   +    +        +     Q+T          +   SG++
Sbjct: 82  NPGDPANTVAPVGRLKLVKAEGNEVQRGDDGMFRLTQAAQATRGATLQADPTIRVMSGVL 141

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NV  +    DM  + R +   ++ I    +  +    LL
Sbjct: 142 EGSNVKPVEAMTDMIASARRFEMQMKIISSVDENASKANQLL 183


>gi|187926953|ref|YP_001893298.1| flagellar basal-body rod protein FlgF [Ralstonia pickettii 12J]
 gi|241665282|ref|YP_002983641.1| flagellar basal-body rod protein FlgF [Ralstonia pickettii 12D]
 gi|187728707|gb|ACD29871.1| flagellar basal-body rod protein FlgF [Ralstonia pickettii 12J]
 gi|240867309|gb|ACS64969.1| flagellar basal-body rod protein FlgF [Ralstonia pickettii 12D]
          Length = 245

 Score = 41.0 bits (94), Expect = 0.052,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 23/48 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             G ++  NVN+     +M E +R     +++++ S     +  +LLR
Sbjct: 196 TPGALEGSNVNLTDSLVNMIEISRQLEMQMKSLQTSDTNAQSANELLR 243


>gi|218509843|ref|ZP_03507721.1| flagellar hook protein FlgE [Rhizobium etli Brasil 5]
          Length = 65

 Score = 41.0 bits (94), Expect = 0.052,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 29/64 (45%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            +  S   A SG+  Q+ R+  +S+NIAN  TTG    S  +    +      + SGGV
Sbjct: 1  MSIFGSMKTAVSGMNAQANRLSTVSDNIANVNTTGYKAVSTSFSSLVLPSSGGNYNSGGV 60

Query: 62 RVKK 65
          +   
Sbjct: 61 QTSV 64


>gi|192290239|ref|YP_001990844.1| hypothetical protein Rpal_1843 [Rhodopseudomonas palustris TIE-1]
 gi|192283988|gb|ACF00369.1| protein of unknown function DUF1078 domain protein
           [Rhodopseudomonas palustris TIE-1]
          Length = 273

 Score = 41.0 bits (94), Expect = 0.052,   Method: Composition-based stats.
 Identities = 10/63 (15%), Positives = 23/63 (36%)

Query: 69  DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
             +         +        ++  NV++  +   M +  + Y A  + +  S++MM T 
Sbjct: 209 SPTPQSGPALYVNAGTVVGSALEASNVDIADQMTTMVQAQQAYSACTRVVTASNEMMLTM 268

Query: 129 LDL 131
             L
Sbjct: 269 TSL 271



 Score = 34.5 bits (77), Expect = 5.5,   Method: Composition-based stats.
 Identities = 14/40 (35%), Positives = 22/40 (55%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          + +   A +GL  QSA  + IS N+ANA+TT     +  +
Sbjct: 4  LGALWTATTGLQAQSAAFENISGNVANAQTTAFKATNTAF 43


>gi|1196326|gb|AAB51418.1| flagellar hook protein [Borrelia burgdorferi]
          Length = 372

 Score = 41.0 bits (94), Expect = 0.052,   Method: Composition-based stats.
 Identities = 16/114 (14%), Positives = 31/114 (27%), Gaps = 23/114 (20%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           ++ S +   SGL     RM ++  NIAN  T G   G      +    + +     G   
Sbjct: 1   MMRSLYSGVSGLQNHQTRMDVVGNNIANVNTIGFKKG------RVNFQDMISQSISGASR 54

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
                  +   +     +  +                  D   T   + +  + 
Sbjct: 55  PTDARGGTNPKQVGLGMNVAS-----------------IDTIHTQGAFQSTQKA 91


>gi|310764859|gb|ADP09809.1| Flagellar basal-body rod protein FlgF [Erwinia sp. Ejp617]
          Length = 245

 Score = 41.0 bits (94), Expect = 0.053,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 22/47 (46%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +   ++  NV+ +    +M  T R +  N++TI+ + +       LL
Sbjct: 196 SPETLEGSNVSPVKAMTEMIATARSFDMNMKTIRTADENAKQANQLL 242


>gi|221311596|ref|ZP_03593443.1| flagellar hook-basal body protein [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221315923|ref|ZP_03597728.1| flagellar hook-basal body protein [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221320836|ref|ZP_03602130.1| flagellar hook-basal body protein [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|1763701|emb|CAB05941.1| flhP [Bacillus subtilis subsp. subtilis str. 168]
          Length = 268

 Score = 41.0 bits (94), Expect = 0.053,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 19/43 (44%)

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
               G ++  NV++  +  D+  + R Y  N +TI     M+ 
Sbjct: 220 GMQQGSLEMSNVDISEQMTDLITSQRSYQLNSRTITMGDQMLG 262


>gi|313497763|gb|ADR59129.1| Flagellar basal body rod protein FlgF [Pseudomonas putida BIRD-1]
          Length = 246

 Score = 41.0 bits (94), Expect = 0.053,   Method: Composition-based stats.
 Identities = 8/48 (16%), Positives = 21/48 (43%), Gaps = 3/48 (6%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQS---HDMMTTTLDLL 132
           G ++  NVN + E   +   +R +  +++ +  +    + M   L + 
Sbjct: 199 GFLEGSNVNAVEEMTSVLALSRQFELHVKMMNTAKEGDEAMARVLQIG 246


>gi|26991075|ref|NP_746500.1| flagellar basal body rod protein FlgF [Pseudomonas putida KT2440]
 gi|24986109|gb|AAN69964.1|AE016634_13 flagellar basal-body rod protein FlgF [Pseudomonas putida KT2440]
          Length = 246

 Score = 41.0 bits (94), Expect = 0.053,   Method: Composition-based stats.
 Identities = 8/48 (16%), Positives = 21/48 (43%), Gaps = 3/48 (6%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQS---HDMMTTTLDLL 132
           G ++  NVN + E   +   +R +  +++ +  +    + M   L + 
Sbjct: 199 GFLEGSNVNAVEEMTSVLALSRQFELHVKMMNTAKEGDEAMARVLQIG 246


>gi|323492337|ref|ZP_08097490.1| flagellar basal body rod protein [Vibrio brasiliensis LMG 20546]
 gi|323313384|gb|EGA66495.1| flagellar basal body rod protein [Vibrio brasiliensis LMG 20546]
          Length = 243

 Score = 41.0 bits (94), Expect = 0.053,   Method: Composition-based stats.
 Identities = 6/48 (12%), Positives = 19/48 (39%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
              ++  NV+ + E  ++    R +   ++ +K +  +      L+  
Sbjct: 195 PEHIEGSNVSAIDELLNVMSLTRNFEMQVRMMKTAETLAQAGNKLMSS 242


>gi|295688785|ref|YP_003592478.1| flagellar basal-body rod protein FlgF [Caulobacter segnis ATCC
           21756]
 gi|295430688|gb|ADG09860.1| flagellar basal-body rod protein FlgF [Caulobacter segnis ATCC
           21756]
          Length = 245

 Score = 41.0 bits (94), Expect = 0.053,   Method: Composition-based stats.
 Identities = 8/53 (15%), Positives = 23/53 (43%)

Query: 78  DPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            P        G+++  NV  ++E   + +  R Y +  + +  + ++  T ++
Sbjct: 187 QPAPDAVVHQGMLEASNVQSVLEITKLIQVQRAYESVAKMMDNTSELSRTAVE 239


>gi|78485806|ref|YP_391731.1| hypothetical protein Tcr_1465 [Thiomicrospira crunogena XCL-2]
 gi|78364092|gb|ABB42057.1| Flagellar hook-associated protein FlgK [Thiomicrospira crunogena
           XCL-2]
          Length = 630

 Score = 41.0 bits (94), Expect = 0.053,   Method: Composition-based stats.
 Identities = 18/102 (17%), Positives = 31/102 (30%)

Query: 28  NIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANAS 87
           NIAN  +               S   +   S       + V  +               +
Sbjct: 524 NIANMASLQSKKVLYSDATGNASETLLGGFSKMATNVGMYVHGTEIQLTSQENVFDQINA 583

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
               Y  VN+  E A++    + Y A+ Q I+ S  +  + L
Sbjct: 584 RRESYSGVNLDEEAANLLRFQQAYQASAQIIQTSQSLFQSLL 625


>gi|283955071|ref|ZP_06372574.1| flagellar hook-associated protein FlgK, putative [Campylobacter
           jejuni subsp. jejuni 414]
 gi|283793438|gb|EFC32204.1| flagellar hook-associated protein FlgK, putative [Campylobacter
           jejuni subsp. jejuni 414]
          Length = 608

 Score = 41.0 bits (94), Expect = 0.054,   Method: Composition-based stats.
 Identities = 19/109 (17%), Positives = 30/109 (27%), Gaps = 2/109 (1%)

Query: 26  SENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVAN 85
             ++AN          + Y          M         KI  D             + N
Sbjct: 499 GNDMANKIIQLQYEKVNFYNEDGTIDNLTMEEYYRKLTGKIASDGENNNVVNLSNETLYN 558

Query: 86  A--SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  S       VN   E A + +    Y A  + +   + M+ T L L 
Sbjct: 559 SVYSEYQSKSGVNTNEELAALIQYQSSYGAAAKIVSTVNQMLDTLLGLK 607



 Score = 36.4 bits (82), Expect = 1.5,   Method: Composition-based stats.
 Identities = 12/72 (16%), Positives = 21/72 (29%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            +  + H   +GL     ++     NI+NA  T  T                +    G 
Sbjct: 1  MGIFGTLHTGVTGLKASEVQIATTGNNISNANATFYTRQRVVQTTNGYITTGGVQVGTGT 60

Query: 62 RVKKIGVDQSTF 73
           V+ I      +
Sbjct: 61 AVESIVRLHDEY 72


>gi|34497160|ref|NP_901375.1| flagellar basal-body rod protein FlgF [Chromobacterium violaceum
           ATCC 12472]
 gi|34103017|gb|AAQ59380.1| flagellar basal-body rod protein FlgF [Chromobacterium violaceum
           ATCC 12472]
          Length = 243

 Score = 41.0 bits (94), Expect = 0.054,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 20/48 (41%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            SG ++  NV+ + E       NR +   ++    + DM      L+R
Sbjct: 195 QSGHLERSNVSAVEEMVSTMTLNRNFEMQMKLFNAASDMNEAGNRLVR 242


>gi|300716219|ref|YP_003741022.1| flagellar basal-body rod protein [Erwinia billingiae Eb661]
 gi|299062055|emb|CAX59171.1| Flagellar basal-body rod protein [Erwinia billingiae Eb661]
          Length = 251

 Score = 41.0 bits (94), Expect = 0.055,   Method: Composition-based stats.
 Identities = 11/102 (10%), Positives = 26/102 (25%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           N     +        +   +    +        +     Q+           +    G++
Sbjct: 147 NPGDPPNATVQLGRLKLVKAVGSEVTRGDDGLFRLTATAQAQRGAVLQTDPTIQVMPGVL 206

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NV  +    DM    R +   ++ I    +       LL
Sbjct: 207 EGSNVKPVETMVDMIANARRFEMQMKVISSVDENEQRANQLL 248


>gi|153952418|ref|YP_001398358.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           doylei 269.97]
 gi|152939864|gb|ABS44605.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           doylei 269.97]
          Length = 270

 Score = 41.0 bits (94), Expect = 0.055,   Method: Composition-based stats.
 Identities = 11/84 (13%), Positives = 24/84 (28%), Gaps = 1/84 (1%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
            +   +V       +                  +  A   G  +  NVN + E   + E 
Sbjct: 181 RLFVAQVDDIRALQKDGDNVYKIDDLTRIRYLENSNAIRQGFSQGSNVNPVTEMVGLIEA 240

Query: 108 NRLYMANLQTIKQS-HDMMTTTLD 130
           NR+     + +     D+    ++
Sbjct: 241 NRMVEMYQKVMTAHMDDLNQEAIN 264


>gi|268680906|ref|YP_003305337.1| fagellar hook-basal body protein [Sulfurospirillum deleyianum DSM
           6946]
 gi|268618937|gb|ACZ13302.1| fagellar hook-basal body protein [Sulfurospirillum deleyianum DSM
           6946]
          Length = 567

 Score = 41.0 bits (94), Expect = 0.055,   Method: Composition-based stats.
 Identities = 5/43 (11%), Positives = 22/43 (51%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           ++  NV++     ++    + + A+ ++I  S +++   +++ 
Sbjct: 524 LEGSNVSLATALTELIIVQKAFDASAKSITTSDELLKNAINMK 566


>gi|259907635|ref|YP_002647991.1| Flagellar basal-body rod protein FlgF [Erwinia pyrifoliae Ep1/96]
 gi|224963257|emb|CAX54741.1| Flagellar basal-body rod protein FlgF [Erwinia pyrifoliae Ep1/96]
 gi|283477477|emb|CAY73393.1| Flagellar basal-body rod protein flgF [Erwinia pyrifoliae DSM
           12163]
          Length = 245

 Score = 41.0 bits (94), Expect = 0.056,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 22/47 (46%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +   ++  NV+ +    +M  T R +  N++TI+ + +       LL
Sbjct: 196 SPETLEGSNVSPVKAMTEMIATARSFDMNMKTIRTADENAKQANQLL 242


>gi|134300275|ref|YP_001113771.1| flagellar hook-associated protein FlgK [Desulfotomaculum reducens
           MI-1]
 gi|134052975|gb|ABO50946.1| flagellar hook-associated protein FlgK [Desulfotomaculum reducens
           MI-1]
          Length = 586

 Score = 41.0 bits (94), Expect = 0.056,   Method: Composition-based stats.
 Identities = 7/41 (17%), Positives = 17/41 (41%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             V++  E   + +    Y A  + I    +M+   ++ +R
Sbjct: 546 SGVSIDEELTKVIQYQYGYQACARMISMQDEMLDYLINRIR 586



 Score = 37.9 bits (86), Expect = 0.47,   Method: Composition-based stats.
 Identities = 17/88 (19%), Positives = 21/88 (23%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M        IA  G  V    M +   NI NA T G +         T         +  
Sbjct: 1  MTSTWFGLEIAKRGTQVYRKAMDVTGHNITNANTPGYSRQEAVISPSTPWTRPDYLTAMT 60

Query: 61 VRVKKIGVDQSTFVEEFDPGHPVANASG 88
                G D        D    V   + 
Sbjct: 61 PGQLGTGADVKEVRRIRDYYLDVQMRNS 88


>gi|320354341|ref|YP_004195680.1| flagellar hook-basal body protein [Desulfobulbus propionicus DSM
           2032]
 gi|320122843|gb|ADW18389.1| flagellar hook-basal body protein [Desulfobulbus propionicus DSM
           2032]
          Length = 244

 Score = 41.0 bits (94), Expect = 0.056,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 24/55 (43%)

Query: 78  DPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
            P        G ++  NVN++ E   M +T R + A+L+ ++    +     +L 
Sbjct: 187 QPLADYRVLQGSLETSNVNMIEEMTAMVDTQRTFEAHLKALESYSKLGEKQDELG 241


>gi|332982896|ref|YP_004464337.1| flagellar hook-associated protein FlgK [Mahella australiensis
          50-1 BON]
 gi|332700574|gb|AEE97515.1| flagellar hook-associated protein FlgK [Mahella australiensis
          50-1 BON]
          Length = 495

 Score = 41.0 bits (94), Expect = 0.057,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 17/41 (41%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGS 41
          M        I  S + +Q   + + + NIANA T G T   
Sbjct: 1  MSSTFYGLQIGKSAINLQQQALNVTAHNIANAGTPGYTRQQ 41



 Score = 36.4 bits (82), Expect = 1.2,   Method: Composition-based stats.
 Identities = 7/38 (18%), Positives = 16/38 (42%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             V +  E  +M +  + Y A  + I    +M+   ++
Sbjct: 451 SGVLLDEELMNMVKFQQSYNAAARVITAMDEMLDVLVN 488


>gi|92114097|ref|YP_574025.1| flagellar basal-body rod FlgF [Chromohalobacter salexigens DSM
           3043]
 gi|91797187|gb|ABE59326.1| Flagellar basal-body rod FlgF [Chromohalobacter salexigens DSM
           3043]
          Length = 253

 Score = 41.0 bits (94), Expect = 0.057,   Method: Composition-based stats.
 Identities = 15/106 (14%), Positives = 32/106 (30%), Gaps = 2/106 (1%)

Query: 29  IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR--VKKIGVDQSTFVEEFDPGHPVANA 86
           I+      +     P  R  +   ++   + G     +    D +               
Sbjct: 144 ISVLEAGANPDEIAPVGRLKLVTPDLQALTRGDDGWFRLPPGDDAEIAAPQPLDEDARLQ 203

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           SG+++  NV+       M +  R Y   ++ I+ +         LL
Sbjct: 204 SGVLEGSNVSATDAMVAMIDGARRYDMQMKVIESADQNAQRANSLL 249


>gi|77464909|ref|YP_354413.1| flagellar basal body rod protein FlgB [Rhodobacter sphaeroides
           2.4.1]
 gi|77389327|gb|ABA80512.1| hypothetical protein RSP_1331 [Rhodobacter sphaeroides 2.4.1]
          Length = 127

 Score = 41.0 bits (94), Expect = 0.057,   Method: Composition-based stats.
 Identities = 23/134 (17%), Positives = 43/134 (32%), Gaps = 8/134 (5%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M   +    +A S       R ++++ N+ANA T G      P      S    +  +  
Sbjct: 1   MFEKLVIVRMAQSMARHAGLRTEVVAHNLANADTPGYRAQDLPDFESYASGTVGLRTTRP 60

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
             ++      +  V    PG    N +       V++  E        + +   L   + 
Sbjct: 61  GHLRSAEASATDPVPVEGPGAASPNGNT------VSLEDEMVRAVAARQQHELALAIYQS 114

Query: 121 SHDMMTTTLDLLRD 134
           S  ++ T   L R 
Sbjct: 115 SSRLIRT--SLGRS 126


>gi|291526374|emb|CBK91961.1| flagellar hook-associated protein FlgK [Eubacterium rectale DSM
          17629]
 gi|291526819|emb|CBK92405.1| flagellar hook-associated protein FlgK [Eubacterium rectale
          M104/1]
          Length = 617

 Score = 41.0 bits (94), Expect = 0.058,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 26/70 (37%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M       HI +S L+         + NIAN +TTG T      + K        +GS G
Sbjct: 1  MASTFFGLHIGSSALSSFQVATNTTANNIANVKTTGYTRQEATLQAKDAINVTARYGSVG 60

Query: 61 VRVKKIGVDQ 70
            V    + Q
Sbjct: 61 TGVTVTSIKQ 70


>gi|325567534|ref|ZP_08144201.1| flagellar basal-body rod protein FlgB [Enterococcus casseliflavus
           ATCC 12755]
 gi|325158967|gb|EGC71113.1| flagellar basal-body rod protein FlgB [Enterococcus casseliflavus
           ATCC 12755]
          Length = 158

 Score = 41.0 bits (94), Expect = 0.058,   Method: Composition-based stats.
 Identities = 26/127 (20%), Positives = 45/127 (35%), Gaps = 8/127 (6%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           L+ +  +  + + V + R ++IS NIAN  T G       +       ++ +  SG   V
Sbjct: 39  LLDTYDLLKTAMNVSAQRAELISSNIANVNTDGYKAKRIVF---ESELKQALASSGTDAV 95

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
            +  V Q       +    + +        NV++ VE  D       Y A    +     
Sbjct: 96  TEASVSQVKPKITENATTSIKDNGN-----NVDLEVEMLDQAANGLYYSALTAQVNGRLQ 150

Query: 124 MMTTTLD 130
           MM   L 
Sbjct: 151 MMNLVLS 157


>gi|300722681|ref|YP_003711971.1| flagellar basal-body rod cell-proximal protein [Xenorhabdus
           nematophila ATCC 19061]
 gi|297629188|emb|CBJ89784.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
           [Xenorhabdus nematophila ATCC 19061]
          Length = 251

 Score = 41.0 bits (94), Expect = 0.058,   Method: Composition-based stats.
 Identities = 9/47 (19%), Positives = 19/47 (40%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
             G+++  NVN +    +M    R +   ++ I  S +       +L
Sbjct: 202 MPGVLEGSNVNPVESMVNMIANARRFEMQMKVIHSSDENAQRANQIL 248


>gi|150395482|ref|YP_001325949.1| flagellar basal body rod protein FlgB [Sinorhizobium medicae
           WSM419]
 gi|150026997|gb|ABR59114.1| flagellar basal body rod protein [Sinorhizobium medicae WSM419]
          Length = 126

 Score = 41.0 bits (94), Expect = 0.059,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 36/114 (31%), Gaps = 8/114 (7%)

Query: 19  SARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFD 78
           S R  +++ NIANA T           R    FE V+  +G           +   +   
Sbjct: 18  SVRQNVVAGNIANANTPH------YKARDVQPFESVLQNTGVQMAATHRAHFTESADAAQ 71

Query: 79  PGHPVANASGIVKYPN--VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
                A     V+     V +  E        R Y  N   +K  H M+  T+ 
Sbjct: 72  VTEVSALDDVAVQQSGNTVALEEELMKTGAIKRDYELNAGLVKSFHRMILMTVR 125


>gi|299822281|ref|ZP_07054167.1| flagellar hook-associated protein FlgK [Listeria grayi DSM 20601]
 gi|299815810|gb|EFI83048.1| flagellar hook-associated protein FlgK [Listeria grayi DSM 20601]
          Length = 509

 Score = 41.0 bits (94), Expect = 0.059,   Method: Composition-based stats.
 Identities = 13/88 (14%), Positives = 30/88 (34%), Gaps = 2/88 (2%)

Query: 47  KTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP--NVNVLVETADM 104
            T      +       +  +  D S         +   +     K     VN+  E  ++
Sbjct: 422 TTTIGNATLSDFMDGLITTVATDSSGANAIAKAENQTLDNLSNAKSSVEGVNIDEEMTNI 481

Query: 105 RETNRLYMANLQTIKQSHDMMTTTLDLL 132
            +    Y+AN + +   +DM  + L+++
Sbjct: 482 MQYQSYYVANTKAMNIVNDMFQSLLNIM 509


>gi|296331269|ref|ZP_06873741.1| flagellar basal body rod protein FlgG [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305676256|ref|YP_003867928.1| putative flagellar hook-basal body protein [Bacillus subtilis
           subsp. spizizenii str. W23]
 gi|296151384|gb|EFG92261.1| flagellar basal body rod protein FlgG [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305414500|gb|ADM39619.1| putative flagellar hook-basal body protein [Bacillus subtilis
           subsp. spizizenii str. W23]
          Length = 269

 Score = 41.0 bits (94), Expect = 0.060,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 19/41 (46%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
             G ++  NV++  +  D+  + R Y  N +TI     M+ 
Sbjct: 223 EQGSLEMSNVDISEQMTDLITSQRSYQLNSRTITMGDQMLG 263


>gi|52841457|ref|YP_095256.1| flagellar hook-associated protein FlgK [Legionella pneumophila
          subsp. pneumophila str. Philadelphia 1]
 gi|52628568|gb|AAU27309.1| flagellar hook associated protein 1 FlgK [Legionella pneumophila
          subsp. pneumophila str. Philadelphia 1]
          Length = 649

 Score = 41.0 bits (94), Expect = 0.060,   Method: Composition-based stats.
 Identities = 18/69 (26%), Positives = 29/69 (42%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          ++  +IA SGL      + +   NIAN +T G +  S  +   T +     +   GV V 
Sbjct: 1  MSILNIAYSGLNAFQRALDVTGNNIANFKTRGYSRQSIQFTPITSNRYAGSYIGAGVSVA 60

Query: 65 KIGVDQSTF 73
           I  +   F
Sbjct: 61 SIYRNVDQF 69



 Score = 34.1 bits (76), Expect = 7.5,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 21/42 (50%)

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
              VN+  E A++    + Y A  + ++ S+ +M    D++R
Sbjct: 608 KSGVNLDEEGANLLVFQQAYQAAGKLMEISNQIMNLLFDIMR 649


>gi|157961172|ref|YP_001501206.1| flagellar basal body rod protein FlgF [Shewanella pealeana ATCC
           700345]
 gi|157846172|gb|ABV86671.1| flagellar basal-body rod protein FlgF [Shewanella pealeana ATCC
           700345]
          Length = 247

 Score = 41.0 bits (94), Expect = 0.060,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 21/44 (47%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           V+  NVN + E   M +  R +   ++ +K + +    +  L+R
Sbjct: 202 VEGSNVNAVHEMVSMIDLQRQFEMQVKMMKTAEENDRASSSLMR 245


>gi|24374756|ref|NP_718799.1| flagellar basal body rod protein FlgF [Shewanella oneidensis MR-1]
 gi|24349420|gb|AAN56243.1|AE015761_13 flagellar basal-body rod protein FlgF [Shewanella oneidensis MR-1]
          Length = 247

 Score = 41.0 bits (94), Expect = 0.060,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 23/48 (47%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            SG V+  NVN + E   + +  R +   ++ +K + +    +  L+R
Sbjct: 198 ESGAVEGSNVNSVDEMVSLIDLQRQFELQVKMMKTAEENDRASSSLMR 245


>gi|262273528|ref|ZP_06051342.1| flagellar basal-body rod protein FlgF [Grimontia hollisae CIP
           101886]
 gi|262222506|gb|EEY73817.1| flagellar basal-body rod protein FlgF [Grimontia hollisae CIP
           101886]
          Length = 243

 Score = 41.0 bits (94), Expect = 0.061,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 23/46 (50%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  NVN +       + +R +   ++ +K + ++ +T   L+R
Sbjct: 196 GYLESSNVNAIDALVKNIDLSRNFEFQIKMMKTAEELASTGNRLVR 241


>gi|220925381|ref|YP_002500683.1| flagellar basal body rod protein FlgB [Methylobacterium nodulans
           ORS 2060]
 gi|219949988|gb|ACL60380.1| flagellar basal body rod protein [Methylobacterium nodulans ORS
           2060]
          Length = 134

 Score = 41.0 bits (94), Expect = 0.061,   Method: Composition-based stats.
 Identities = 20/122 (16%), Positives = 35/122 (28%), Gaps = 9/122 (7%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFV 74
           +     R ++++EN+ANA T G                    G  G+ V++         
Sbjct: 16  MQWHQTRQKVLAENVANANTPGFKARDLRAPVFRPDGSLAASGPAGIVVERTSPMHLAGT 75

Query: 75  EEFDPGHPVANASGIVKYPN--VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
               P          V      V++  E     +    Y         +  +   +L LL
Sbjct: 76  GATGPAEERERTRFDVVPSGNAVSLEDEMLKAADNQASYQL-------AASLYQKSLQLL 128

Query: 133 RD 134
           R 
Sbjct: 129 RS 130


>gi|296186750|ref|ZP_06855152.1| hypothetical protein CLCAR_2214 [Clostridium carboxidivorans P7]
 gi|296048787|gb|EFG88219.1| hypothetical protein CLCAR_2214 [Clostridium carboxidivorans P7]
          Length = 160

 Score = 41.0 bits (94), Expect = 0.061,   Method: Composition-based stats.
 Identities = 8/41 (19%), Positives = 19/41 (46%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             V++  E A++ +    Y AN + I     ++   ++ L+
Sbjct: 119 SGVSLDEEMANLVQFQHCYQANAKLISTVDQLLDVVINGLK 159


>gi|157736472|ref|YP_001489155.1| flagellar hook-associated protein FlgK [Arcobacter butzleri RM4018]
 gi|157698326|gb|ABV66486.1| flagellar hook-associated protein FlgK [Arcobacter butzleri RM4018]
          Length = 636

 Score = 41.0 bits (94), Expect = 0.061,   Method: Composition-based stats.
 Identities = 18/105 (17%), Positives = 34/105 (32%), Gaps = 9/105 (8%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             L  + ++A +GL+     ++ +S NIAN  T G       Y+++     E+      +
Sbjct: 1   MSLFGTFNVAQTGLSASRYGIETVSNNIANKDTDG-------YKKRVTDLSEIGQMGSSI 53

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
             + + VD                     K    + L       E
Sbjct: 54  TGRGVNVD--GVSRVTSQYLYDNYTKEYTKTSYYDKLTNMLGNIE 96



 Score = 38.7 bits (88), Expect = 0.30,   Method: Composition-based stats.
 Identities = 10/37 (27%), Positives = 16/37 (43%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           V+   E  ++ +    Y AN Q I    +M+   L L
Sbjct: 598 VDEDDEMVNLMKLQAAYSANAQMITAVDEMIKVILGL 634


>gi|118474675|ref|YP_891310.1| flagellar hook-associated protein FlgK [Campylobacter fetus
          subsp. fetus 82-40]
 gi|118413901|gb|ABK82321.1| flagellar hook-associated protein FlgK [Campylobacter fetus
          subsp. fetus 82-40]
          Length = 617

 Score = 41.0 bits (94), Expect = 0.061,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 22/72 (30%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            +  S +   SGL     ++Q+  +NI N  +   T         T           G 
Sbjct: 1  MGIFDSLYTGASGLNAAQLQIQVTGQNITNINSDYYTRQRVVQSATTPLHTSPGDVGMGT 60

Query: 62 RVKKIGVDQSTF 73
          R+  I      F
Sbjct: 61 RIDTIIRIHDEF 72



 Score = 36.8 bits (83), Expect = 0.97,   Method: Composition-based stats.
 Identities = 14/109 (12%), Positives = 32/109 (29%), Gaps = 2/109 (1%)

Query: 27  ENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHP--VA 84
            ++ANA         + Y        E + G        I     +     +       +
Sbjct: 509 NSMANAMINLQYQSLNFYANDGTIRSETITGYYRYLTTDIASKTESVNALNNTNLSLYKS 568

Query: 85  NASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             +       VN+  E  ++ +    Y A  + +     M+ T + + +
Sbjct: 569 VNAEFQSISGVNMDEELGNLIKFQSSYGAAAKIVTTVEKMLETLIGMKQ 617


>gi|148266109|ref|YP_001232815.1| flagellar hook-associated protein FlgK [Geobacter uraniireducens
           Rf4]
 gi|146399609|gb|ABQ28242.1| flagellar hook-associated protein FlgK [Geobacter uraniireducens
           Rf4]
          Length = 478

 Score = 41.0 bits (94), Expect = 0.061,   Method: Composition-based stats.
 Identities = 19/108 (17%), Positives = 42/108 (38%), Gaps = 5/108 (4%)

Query: 28  NIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVD-QSTFVEEFDPGHPVANA 86
           N  NA++               +    + G     V K+GVD Q+    E      +   
Sbjct: 374 NNKNAQSIASVYDK---FLAMSAGNVTLEGFYDSLVGKVGVDVQNAGRAESQSDGILKQL 430

Query: 87  SGIVK-YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           + + +    V++  E A++ +  + Y    + I    +M+ T ++L++
Sbjct: 431 NNMRESASGVSLDEELANLIKYQKAYEGAAKLINVGSEMLDTVINLVK 478



 Score = 39.1 bits (89), Expect = 0.21,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 33/102 (32%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             + +      + L  Q   +++  ENI N  TTG +  +        + E       GV
Sbjct: 1   MSINSLLETGRTALNAQKLALEVTGENITNVNTTGYSRQTTILETAPTTLERGFPLGSGV 60

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETAD 103
           +V  +      F++    G       G      +  + +  +
Sbjct: 61  KVAAVQRSYDGFLQTQIMGQNATYGQGKTSNSALQRVQQLFN 102


>gi|330953726|gb|EGH53986.1| flagellar basal body rod protein FlgG [Pseudomonas syringae Cit
          7]
          Length = 113

 Score = 41.0 bits (94), Expect = 0.062,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 23/42 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ + ++A +GLA Q   +  IS N+AN  TTG       ++
Sbjct: 1  MLPALYVAKTGLAAQDTNLTTISNNLANVSTTGFKSDRAEFQ 42


>gi|189426331|ref|YP_001953508.1| flagellar basal body rod protein [Geobacter lovleyi SZ]
 gi|189422590|gb|ACD96988.1| flagellar basal body rod protein [Geobacter lovleyi SZ]
          Length = 258

 Score = 41.0 bits (94), Expect = 0.062,   Method: Composition-based stats.
 Identities = 11/61 (18%), Positives = 23/61 (37%)

Query: 70  QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
            +        G     A G ++  NVN + E   M + +R +    + ++   DM    +
Sbjct: 193 PAAGTAVQAAGPLTTVAQGALEQSNVNTIAEMVQMVDASRYFETCQRVVRSFDDMAAKAV 252

Query: 130 D 130
           +
Sbjct: 253 N 253



 Score = 35.2 bits (79), Expect = 3.3,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 19/41 (46%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          + +  + A SG      R+ +IS N+ANA T G       +
Sbjct: 1  MNSGMYSALSGNLAAMKRLDVISSNLANASTNGFKQDRLAF 41


>gi|292489132|ref|YP_003532019.1| flagellar basal-body rod protein FlgF [Erwinia amylovora CFBP1430]
 gi|292900251|ref|YP_003539620.1| flagellar basal-body rod protein [Erwinia amylovora ATCC 49946]
 gi|291200099|emb|CBJ47225.1| flagellar basal-body rod protein [Erwinia amylovora ATCC 49946]
 gi|291554566|emb|CBA22179.1| Flagellar basal-body rod protein flgF [Erwinia amylovora CFBP1430]
 gi|312173290|emb|CBX81545.1| Flagellar basal-body rod protein flgF [Erwinia amylovora ATCC
           BAA-2158]
          Length = 245

 Score = 41.0 bits (94), Expect = 0.062,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 22/47 (46%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +   ++  NV+ +    +M  T R +  N++TI+ + +       LL
Sbjct: 196 SPETLEGSNVSPVKAMTEMIATARSFDMNMKTIRTADENAKQANQLL 242


>gi|165925081|ref|ZP_02220913.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165939053|ref|ZP_02227605.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|166008950|ref|ZP_02229848.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|167418761|ref|ZP_02310514.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167466336|ref|ZP_02331040.1| flagellar basal body rod protein FlgF [Yersinia pestis FV-1]
 gi|229840624|ref|ZP_04460783.1| Flagellar basal-body rod protein flgF [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229842825|ref|ZP_04462977.1| Flagellar basal-body rod protein flgF [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|294502790|ref|YP_003566852.1| hypothetical protein YPZ3_0680 [Yersinia pestis Z176003]
 gi|165913009|gb|EDR31634.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|165923281|gb|EDR40432.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165992289|gb|EDR44590.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166962755|gb|EDR58776.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|229690092|gb|EEO82149.1| Flagellar basal-body rod protein flgF [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229696990|gb|EEO87037.1| Flagellar basal-body rod protein flgF [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|262360822|gb|ACY57543.1| hypothetical protein YPD4_0634 [Yersinia pestis D106004]
 gi|262364767|gb|ACY61324.1| hypothetical protein YPD8_0634 [Yersinia pestis D182038]
 gi|294353249|gb|ADE63590.1| hypothetical protein YPZ3_0680 [Yersinia pestis Z176003]
          Length = 197

 Score = 40.6 bits (93), Expect = 0.063,   Method: Composition-based stats.
 Identities = 9/60 (15%), Positives = 23/60 (38%)

Query: 74  VEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
                    V   +  ++  NV+ + E       +R + A ++ +K + D+      ++R
Sbjct: 136 RGPAARDETVQVVNKHLESSNVSAISEMIASISLSRQFEAQIKMMKVAEDLAQAGNRMIR 195


>gi|224825170|ref|ZP_03698276.1| flagellar hook-associated protein FlgK [Lutiella nitroferrum 2002]
 gi|224602841|gb|EEG09018.1| flagellar hook-associated protein FlgK [Lutiella nitroferrum 2002]
          Length = 598

 Score = 40.6 bits (93), Expect = 0.063,   Method: Composition-based stats.
 Identities = 8/40 (20%), Positives = 21/40 (52%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
             VN+  E A++ +  + Y A+ + I+ +  + ++ L + 
Sbjct: 559 SGVNLDEEAANLIKYQQAYQASSKVIQIAQQLFSSLLQIG 598



 Score = 37.2 bits (84), Expect = 0.82,   Method: Composition-based stats.
 Identities = 13/82 (15%), Positives = 25/82 (30%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           +   I  SGL      + + S NI+N  T G T        +            GV + 
Sbjct: 3  TSIFSIGVSGLNAAQGALTVTSHNISNVNTAGYTRQVTQQAARYPQSASYGFIGQGVDLT 62

Query: 65 KIGVDQSTFVEEFDPGHPVANA 86
           +      ++ +        ++
Sbjct: 63 HVNRVYDDYLTQQVQSAQATDS 84


>gi|225181620|ref|ZP_03735061.1| flagellar hook-associated protein FlgK [Dethiobacter alkaliphilus
          AHT 1]
 gi|225167728|gb|EEG76538.1| flagellar hook-associated protein FlgK [Dethiobacter alkaliphilus
          AHT 1]
          Length = 494

 Score = 40.6 bits (93), Expect = 0.064,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 24/65 (36%), Gaps = 1/65 (1%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M       +I+  G+  Q   +++ + N+ANA T G +         T        G  G
Sbjct: 1  MSTFF-GLNISRLGMQAQQKALEVTAHNVANANTPGYSRQVAGMSTTTPLPYPNGQGMLG 59

Query: 61 VRVKK 65
            VK 
Sbjct: 60 SGVKV 64



 Score = 39.5 bits (90), Expect = 0.14,   Method: Composition-based stats.
 Identities = 8/38 (21%), Positives = 18/38 (47%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             V++  E A+M +    Y A+ + I    ++  T ++
Sbjct: 453 SGVSIDEEMANMVQFQLSYQASARVITTLDEIYDTLIN 490


>gi|206603146|gb|EDZ39626.1| Probable flagellar hook protein FlgE [Leptospirillum sp. Group II
           '5-way CG']
          Length = 457

 Score = 40.6 bits (93), Expect = 0.064,   Method: Composition-based stats.
 Identities = 13/72 (18%), Positives = 23/72 (31%)

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
           GG    +              G   A  S  ++    ++  +  DM    R Y A+   I
Sbjct: 383 GGNAYIESIASGVPNFGRPGQGGRGALLSNSLELSTTDLGRQMVDMITAERGYQASASII 442

Query: 119 KQSHDMMTTTLD 130
              + ++ T L 
Sbjct: 443 ATDNTILNTLLT 454



 Score = 37.9 bits (86), Expect = 0.47,   Method: Composition-based stats.
 Identities = 19/87 (21%), Positives = 30/87 (34%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            +++S ++A SGL      M +I  NI N  T G   G   +             +   
Sbjct: 1  MGVLSSMYVATSGLNAMGTDMSVIGNNITNLNTVGFKQGRAVFANVYGQTMTGRSNTVNT 60

Query: 62 RVKKIGVDQSTFVEEFDPGHPVANASG 88
               GV      +EF  G   A+ + 
Sbjct: 61 SQPGSGVYVDAIQQEFTQGSVQASTNA 87


>gi|769850|gb|AAA91361.1| flagellar distal rod protein [Borrelia burgdorferi N40]
          Length = 372

 Score = 40.6 bits (93), Expect = 0.065,   Method: Composition-based stats.
 Identities = 16/114 (14%), Positives = 31/114 (27%), Gaps = 23/114 (20%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           ++ S +   SGL     RM ++  NIAN  T G   G      +    + +     G   
Sbjct: 1   MMRSLYSGVSGLQNHQTRMDVVGNNIANVNTIGFKKG------RVNFQDMISQSISGASR 54

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
                  +   +     +  +                  D   T   + +  + 
Sbjct: 55  PTDARGGTNPKQVGLGMNVAS-----------------IDTIHTQGAFQSTQKA 91


>gi|237653582|ref|YP_002889896.1| flagellar basal-body rod protein FlgF [Thauera sp. MZ1T]
 gi|237624829|gb|ACR01519.1| flagellar basal-body rod protein FlgF [Thauera sp. MZ1T]
          Length = 246

 Score = 40.6 bits (93), Expect = 0.065,   Method: Composition-based stats.
 Identities = 14/106 (13%), Positives = 31/106 (29%), Gaps = 4/106 (3%)

Query: 27  ENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANA 86
           +N       G      P +   ++    +        + +  D   F  +     PV   
Sbjct: 133 DNEITIGADGSVSALQPDQPGVVNVVAQLKLVNPPEAQLVRGDDGLFRLQGGAPAPVDPN 192

Query: 87  ----SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
                G ++  NVNV+ +   M    R +    + +  +     + 
Sbjct: 193 VRVAGGYLEGSNVNVVDQMVQMISLARQFEMQTRMLSTAEQNDRSA 238


>gi|218516400|ref|ZP_03513240.1| flagellar hook protein FlgE [Rhizobium etli 8C-3]
          Length = 126

 Score = 40.6 bits (93), Expect = 0.065,   Method: Composition-based stats.
 Identities = 13/36 (36%), Positives = 20/36 (55%)

Query: 3  YLIASAHIANSGLAVQSARMQIISENIANARTTGDT 38
              S   A SG++ Q+ R+  +S+NIA+A T G  
Sbjct: 27 AFFGSMKTAVSGMSAQANRLSTVSDNIADANTVGYK 62


>gi|167034942|ref|YP_001670173.1| flagellar basal body rod protein FlgF [Pseudomonas putida GB-1]
 gi|166861430|gb|ABY99837.1| flagellar basal-body rod protein FlgF [Pseudomonas putida GB-1]
          Length = 246

 Score = 40.6 bits (93), Expect = 0.065,   Method: Composition-based stats.
 Identities = 8/48 (16%), Positives = 21/48 (43%), Gaps = 3/48 (6%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQS---HDMMTTTLDLL 132
           G ++  NVN + E   +   +R +  +++ +  +    + M   L + 
Sbjct: 199 GFLEGSNVNAVEEMTSVLALSRQFELHVKMMNTAKEGDEAMARVLQIG 246


>gi|91976147|ref|YP_568806.1| flagellar hook-associated protein [Rhodopseudomonas palustris
           BisB5]
 gi|91682603|gb|ABE38905.1| Flagellar hook-associated protein [Rhodopseudomonas palustris
           BisB5]
          Length = 623

 Score = 40.6 bits (93), Expect = 0.065,   Method: Composition-based stats.
 Identities = 8/47 (17%), Positives = 16/47 (34%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
                    VN+  E A +      Y AN + +   + M    + ++
Sbjct: 577 QQKYSTSSGVNMDEEMAHLLSLQNAYSANARVMSTVNQMYQALMQVM 623



 Score = 35.2 bits (79), Expect = 2.8,   Method: Composition-based stats.
 Identities = 24/67 (35%), Positives = 30/67 (44%), Gaps = 7/67 (10%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            L  +  IA +GL    A M ++S N+ANA T G       Y RKT+       G  G 
Sbjct: 1  MGLGDALSIAMAGLRANQASMSLVSSNVANAETPG-------YVRKTVDQITTTAGPSGS 53

Query: 62 RVKKIGV 68
           V  IGV
Sbjct: 54 GVSIIGV 60


>gi|169831934|ref|YP_001717916.1| flagellar hook-associated protein FlgK [Candidatus Desulforudis
           audaxviator MP104C]
 gi|169638778|gb|ACA60284.1| flagellar hook-associated protein FlgK [Candidatus Desulforudis
           audaxviator MP104C]
          Length = 532

 Score = 40.6 bits (93), Expect = 0.066,   Method: Composition-based stats.
 Identities = 14/82 (17%), Positives = 28/82 (34%), Gaps = 2/82 (2%)

Query: 51  FEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP--NVNVLVETADMRETN 108
            +  + G     V  IG D +      D    +      ++     VN+  E   M +  
Sbjct: 448 DDTTLDGYYQQLVTGIGADLNAAQRGRDNVSAILGQIEALRESVSGVNLDEELTRMIQYQ 507

Query: 109 RLYMANLQTIKQSHDMMTTTLD 130
             Y A  + I    +++ T ++
Sbjct: 508 YGYQAAARVITVLDELLDTLIN 529



 Score = 35.2 bits (79), Expect = 2.9,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 15/53 (28%), Gaps = 2/53 (3%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE 53
          M +L     IA   L      M   + NIAN  T G        +        
Sbjct: 1  MSFL--GIEIARRSLHGHQQAMNTTAHNIANINTPGYKRQEAVLQSTPAIAYP 51


>gi|94263246|ref|ZP_01287063.1| Flagellar basal-body rod protein FlgB [delta proteobacterium
           MLMS-1]
 gi|94264090|ref|ZP_01287889.1| Flagellar basal-body rod protein FlgB [delta proteobacterium
           MLMS-1]
 gi|93455506|gb|EAT05696.1| Flagellar basal-body rod protein FlgB [delta proteobacterium
           MLMS-1]
 gi|93456464|gb|EAT06584.1| Flagellar basal-body rod protein FlgB [delta proteobacterium
           MLMS-1]
          Length = 128

 Score = 40.6 bits (93), Expect = 0.066,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 34/114 (29%), Gaps = 9/114 (7%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
            S  + +  L +++ R  +I  NIAN  T G      P+ +                   
Sbjct: 9   GSIEVMHQALNLRNERQGLIQSNIANLETPGYKVQDFPFEKAMERAMSGRGQLARTNPGH 68

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           IGV  S                       V++  E   + E   +Y A  Q I 
Sbjct: 69  IGVGPSEAARPGQYRQAERP---------VDLEEEMLKLSENQLMYQATSQLIT 113


>gi|83589620|ref|YP_429629.1| flagellar basal-body rod protein FlgB [Moorella thermoacetica ATCC
           39073]
 gi|83572534|gb|ABC19086.1| flagellar basal-body rod protein FlgB [Moorella thermoacetica ATCC
           39073]
          Length = 132

 Score = 40.6 bits (93), Expect = 0.066,   Method: Composition-based stats.
 Identities = 20/132 (15%), Positives = 43/132 (32%), Gaps = 1/132 (0%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            +L  + ++    L   + R + I+ NIAN  T G       +  +      +  G    
Sbjct: 1   MFLTPTMYVLEKALDTATLRQRTIAHNIANVNTPGFKRYQVSFEDQLSRALGLEPGLPLY 60

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
           R     +  S            +         NV++  E  D+ + +  +   +Q +   
Sbjct: 61  RTNPYHLPPSGLELAPQVSRDTSTTMR-QDGNNVDIDREMVDLAQNSLNFNVAVQQLNTR 119

Query: 122 HDMMTTTLDLLR 133
             M+   ++  R
Sbjct: 120 LAMLRYVINEGR 131


>gi|56965598|ref|YP_177332.1| flagellar basal-body rod protein [Bacillus clausii KSM-K16]
 gi|56911844|dbj|BAD66371.1| flagellar basal-body rod protein [Bacillus clausii KSM-K16]
          Length = 265

 Score = 40.6 bits (93), Expect = 0.066,   Method: Composition-based stats.
 Identities = 9/58 (15%), Positives = 20/58 (34%)

Query: 73  FVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
                +P    +     ++  NV+       M    RL+ AN + ++     M   ++
Sbjct: 202 PSAHGNPDIDFSIRQAAIERSNVDTAASMNAMLSAYRLFEANQKVVQAYDQSMDKAVN 259



 Score = 34.8 bits (78), Expect = 3.6,   Method: Composition-based stats.
 Identities = 18/93 (19%), Positives = 30/93 (32%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++   + A SG+        +++ N+ANA+T G        R       E    S    V
Sbjct: 1  MLKGLYTATSGMLAAQYHQDMLANNLANAQTPGYKAEQSVSRAFPTFLMEAQSVSKAGTV 60

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVN 96
          +K G+               A    I +  N  
Sbjct: 61 QKQGLGSLATAVYLQEQQTNARQGDIQETGNTT 93


>gi|121997318|ref|YP_001002105.1| flagellar basal-body rod protein FlgF [Halorhodospira halophila
           SL1]
 gi|121588723|gb|ABM61303.1| flagellar basal-body rod protein FlgF [Halorhodospira halophila
           SL1]
          Length = 246

 Score = 40.6 bits (93), Expect = 0.066,   Method: Composition-based stats.
 Identities = 16/105 (15%), Positives = 34/105 (32%), Gaps = 1/105 (0%)

Query: 29  IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPV-ANAS 87
           IA+      TP         +    +++      VK           E            
Sbjct: 138 IADDGVITATPQGGAGAPIELDRLRLVNPDPTQLVKGEDGLIRHAEGEPAADDAQVRVRG 197

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           G ++  NVN+     +M +  R +  +++ +  + +   T+  LL
Sbjct: 198 GALEGSNVNMAESLVNMIDHARQFETHIKMLTAAEENEQTSAQLL 242


>gi|238922534|ref|YP_002936047.1| flagellar hook-associated protein FlgK [Eubacterium rectale ATCC
          33656]
 gi|238874206|gb|ACR73913.1| flagellar hook-associated protein FlgK [Eubacterium rectale ATCC
          33656]
          Length = 617

 Score = 40.6 bits (93), Expect = 0.067,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 26/70 (37%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M       HI +S L+         + NIAN +TTG T      + K        +GS G
Sbjct: 1  MASTFFGLHIGSSALSSFQVATNTTANNIANVKTTGYTRQEATLQAKDAINVTARYGSVG 60

Query: 61 VRVKKIGVDQ 70
            V    + Q
Sbjct: 61 TGVTVTSIKQ 70


>gi|94500248|ref|ZP_01306781.1| Flagellar hook-associated protein [Oceanobacter sp. RED65]
 gi|94427547|gb|EAT12524.1| Flagellar hook-associated protein [Oceanobacter sp. RED65]
          Length = 991

 Score = 40.6 bits (93), Expect = 0.067,   Method: Composition-based stats.
 Identities = 20/104 (19%), Positives = 33/104 (31%), Gaps = 4/104 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +     I  SGL V    + +   NIAN  T G +        +   F+  +   GG RV
Sbjct: 1   MAGILEIGISGLRVHQTALTVTGNNIANVDTEGYSRQDASIVSQNPQFQGGVWIGGGARV 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
             +      F+          + S    +  ++   E  D    
Sbjct: 61  DDVRRIYDEFLVGQLQK----DTSTFNYFDTLSTNAEQIDKLLA 100


>gi|86149406|ref|ZP_01067637.1| flagellar hook-associated protein FlgK, putative [Campylobacter
           jejuni subsp. jejuni CF93-6]
 gi|88596766|ref|ZP_01100003.1| flagellar hook-associated protein FlgK, putative [Campylobacter
           jejuni subsp. jejuni 84-25]
 gi|218563069|ref|YP_002344848.1| flagellar hook-associated protein FlgK [Campylobacter jejuni subsp.
           jejuni NCTC 11168]
 gi|85840188|gb|EAQ57446.1| flagellar hook-associated protein FlgK, putative [Campylobacter
           jejuni subsp. jejuni CF93-6]
 gi|88191607|gb|EAQ95579.1| flagellar hook-associated protein FlgK, putative [Campylobacter
           jejuni subsp. jejuni 84-25]
 gi|112360775|emb|CAL35574.1| putative flagellar hook-associated protein [Campylobacter jejuni
           subsp. jejuni NCTC 11168]
 gi|284926674|gb|ADC29026.1| flagellar hook-associated protein FlgK [Campylobacter jejuni subsp.
           jejuni IA3902]
 gi|315927413|gb|EFV06751.1| flagellar hook-associated protein FlgK [Campylobacter jejuni subsp.
           jejuni DFVF1099]
 gi|315929004|gb|EFV08247.1| flagellar hook-associated protein FlgK [Campylobacter jejuni subsp.
           jejuni 305]
          Length = 608

 Score = 40.6 bits (93), Expect = 0.067,   Method: Composition-based stats.
 Identities = 19/109 (17%), Positives = 29/109 (26%), Gaps = 2/109 (1%)

Query: 26  SENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVAN 85
             ++AN          + Y          M         KI  D             + N
Sbjct: 499 GNDMANKIIQLQYKKVNFYNEDGTIDNLTMEEYYRKLTGKIASDGENNNVVNSSNETLYN 558

Query: 86  A--SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  S       VN   E A + +    Y A  + +     M+ T L L 
Sbjct: 559 SVYSEYQSKSGVNTNEELAALIQYQSSYGAAAKIVSTVDQMLDTLLGLK 607



 Score = 35.6 bits (80), Expect = 2.1,   Method: Composition-based stats.
 Identities = 11/72 (15%), Positives = 21/72 (29%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            +  + +   +GL     ++     NI+NA  T  T                +    G 
Sbjct: 1  MGIFGTLYTGVTGLKASEVQIATTGNNISNANATFYTRQRVVQTTNGYITTGGVQVGTGT 60

Query: 62 RVKKIGVDQSTF 73
           V+ I      +
Sbjct: 61 AVESIVRLHDEY 72


>gi|207110390|ref|ZP_03244552.1| flagellar hook protein FlgE [Helicobacter pylori HPKX_438_CA4C1]
          Length = 107

 Score = 40.6 bits (93), Expect = 0.068,   Method: Composition-based stats.
 Identities = 8/40 (20%), Positives = 14/40 (35%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
            ++  NVN      ++    R Y  N +      DM+   
Sbjct: 68  YLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEA 107


>gi|154252985|ref|YP_001413809.1| flagellar hook-associated protein FlgK [Parvibaculum
           lavamentivorans DS-1]
 gi|154156935|gb|ABS64152.1| flagellar hook-associated protein FlgK [Parvibaculum
           lavamentivorans DS-1]
          Length = 613

 Score = 40.6 bits (93), Expect = 0.068,   Method: Composition-based stats.
 Identities = 10/58 (17%), Positives = 18/58 (31%)

Query: 76  EFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           E       +          VN+  E +++      Y AN + I     +    L + R
Sbjct: 556 EAQQVVASSLQDRFDAQTGVNIDDEMSNLLLLQNAYSANARVITTIKQLFDVLLSIGR 613


>gi|260779346|ref|ZP_05888238.1| flagellar basal-body rod protein FlgF [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260605510|gb|EEX31805.1| flagellar basal-body rod protein FlgF [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 243

 Score = 40.6 bits (93), Expect = 0.069,   Method: Composition-based stats.
 Identities = 9/58 (15%), Positives = 23/58 (39%)

Query: 77  FDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
           F+    V  A   ++  NV+ + E  ++    R +   ++ +K +  +      L+  
Sbjct: 185 FEVDQTVQLAPEHIEGSNVSAIDELLNVMSLTRNFEMQVRMMKTAETLAQAGNKLMSS 242


>gi|253996313|ref|YP_003048377.1| flagellar hook-associated protein FlgK [Methylotenera mobilis JLW8]
 gi|253982992|gb|ACT47850.1| flagellar hook-associated protein FlgK [Methylotenera mobilis JLW8]
          Length = 657

 Score = 40.6 bits (93), Expect = 0.069,   Method: Composition-based stats.
 Identities = 13/103 (12%), Positives = 25/103 (24%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
               +I  S LA     +     NIANA T G +                     G  + 
Sbjct: 3   SNILNIGKSALAAAQVGISTTGHNIANASTPGYSRQVVVQAAAQSQNFGYGFVGQGTEIA 62

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
            +    +  +          ++S       +  + +       
Sbjct: 63  SVTRIFNDILAAQAVRSQSNSSSANTYLSQMTSINDMLSNSTA 105



 Score = 35.2 bits (79), Expect = 3.3,   Method: Composition-based stats.
 Identities = 7/40 (17%), Positives = 16/40 (40%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
             VN+  E  ++    + Y A  + ++ +  +    L L 
Sbjct: 617 SGVNLDEEATNLIRYQQAYQAAGKMMQIASQLFDVLLQLG 656


>gi|54294169|ref|YP_126584.1| flagellar hook-associated protein FlgK [Legionella pneumophila
          str. Lens]
 gi|53754001|emb|CAH15472.1| flagellar hook-associated protein 1 [Legionella pneumophila str.
          Lens]
          Length = 649

 Score = 40.6 bits (93), Expect = 0.069,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 28/69 (40%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          ++  +IA SGL      + +   NIAN +T G +  S  +     +     +   GV V 
Sbjct: 1  MSILNIAYSGLNAFQRALDVTGNNIANFKTRGYSRQSIQFTPIASNRYAGSYIGAGVSVS 60

Query: 65 KIGVDQSTF 73
           I  +   F
Sbjct: 61 SIYRNVDQF 69



 Score = 34.1 bits (76), Expect = 7.3,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 21/42 (50%)

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
              VN+  E A++    + Y A  + ++ S+ +M    D++R
Sbjct: 608 KSGVNLDEEGANLLVFQQAYQAAGKLMEISNQIMNLLFDIMR 649


>gi|51246541|ref|YP_066425.1| flagellar hook-associated protein 1 (FlgK) [Desulfotalea
           psychrophila LSv54]
 gi|50877578|emb|CAG37418.1| related to Flagellar hook-associated protein 1 (FlgK) [Desulfotalea
           psychrophila LSv54]
          Length = 480

 Score = 40.6 bits (93), Expect = 0.069,   Method: Composition-based stats.
 Identities = 13/129 (10%), Positives = 37/129 (28%), Gaps = 3/129 (2%)

Query: 6   ASAHIANSG---LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            +  ++ SG   +A         S  + +                  +            
Sbjct: 351 RAMKVSLSGAAQVAAAQKPTDGTSSKVGDNTNALKIADLSYALVVNGTDSFNSFYGKITS 410

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
              IG +Q+    +      V   +       V++  E   + +    + ++ + +    
Sbjct: 411 TIGIGSNQNKLNLKGAEDALVQVKNLRDSAAGVSLEEEMISLIQFQNSFQSSAKFLSTVD 470

Query: 123 DMMTTTLDL 131
           ++M T L++
Sbjct: 471 ELMDTLLNM 479



 Score = 38.7 bits (88), Expect = 0.26,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 28/74 (37%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  L  + +   + L V   +++I   NIAN  T G +  S                  G
Sbjct: 1  MAGLFNALNAGRTSLEVSQKQIEISGNNIANVNTKGYSKQSAKLSPYPAMNFGGFFVGQG 60

Query: 61 VRVKKIGVDQSTFV 74
          V+V  +    +TF+
Sbjct: 61 VKVTDVDRQHNTFI 74


>gi|328958295|ref|YP_004375681.1| flagellar hook-associated protein FlgK [Carnobacterium sp. 17-4]
 gi|328674619|gb|AEB30665.1| flagellar hook-associated protein FlgK [Carnobacterium sp. 17-4]
          Length = 472

 Score = 40.6 bits (93), Expect = 0.069,   Method: Composition-based stats.
 Identities = 23/101 (22%), Positives = 39/101 (38%), Gaps = 2/101 (1%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDP-YRRKTISFEEVMHGSG 59
           M  L  + + A  GL VQ A +Q  S NI+NA T G +            +   +     
Sbjct: 1   MSGLFGTLNNATKGLNVQQAALQTTSHNISNANTVGYSRQKVTMVADNPYTLGGIGQLGT 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVE 100
           GVR+  I      +V +    +  ++     K  ++   +E
Sbjct: 61  GVRISSIDRIVDPYVNKQL-RNENSSLEMYGKKSDILGQLE 100



 Score = 39.1 bits (89), Expect = 0.20,   Method: Composition-based stats.
 Identities = 7/38 (18%), Positives = 16/38 (42%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             V++  E  +       + AN + I    +M+ T ++
Sbjct: 431 SGVSINEEVTNTIAYQSAFEANSRIISVVSEMLDTLIN 468


>gi|261420582|ref|YP_003254264.1| flagellar hook-associated protein FlgK [Geobacillus sp. Y412MC61]
 gi|319768252|ref|YP_004133753.1| flagellar hook-associated protein FlgK [Geobacillus sp. Y412MC52]
 gi|261377039|gb|ACX79782.1| flagellar hook-associated protein FlgK [Geobacillus sp. Y412MC61]
 gi|317113118|gb|ADU95610.1| flagellar hook-associated protein FlgK [Geobacillus sp. Y412MC52]
          Length = 531

 Score = 40.6 bits (93), Expect = 0.069,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 25/79 (31%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M         A  G+  Q A +   S NIANA T G T      +         ++    
Sbjct: 1  MLSTFHGLEAARRGMMAQQAALYTTSHNIANANTEGYTRQRVQLQPTPPFPTPGLNRPNI 60

Query: 61 VRVKKIGVDQSTFVEEFDP 79
                GV+ S+     + 
Sbjct: 61 PGQMGTGVEASSVERVREY 79



 Score = 38.7 bits (88), Expect = 0.31,   Method: Composition-based stats.
 Identities = 17/133 (12%), Positives = 42/133 (31%), Gaps = 12/133 (9%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK--- 65
           +IA S  + ++      + N+AN R+   +  +   +         ++        +   
Sbjct: 393 NIAASTKSGETGNGNN-AINLANVRSLLLSNATVSLQDGISVNLASLNLPLSSGTVETNY 451

Query: 66  ---IGVDQSTFVEEFDPGHPVANASGIVKY-----PNVNVLVETADMRETNRLYMANLQT 117
              IG       +              V+       +V++  E  +M +    Y A  + 
Sbjct: 452 QGWIGQLGVDGEQANRMKTNSETLRQSVEEKRQSVSSVSLDEEMMNMVKFQHAYNAAARQ 511

Query: 118 IKQSHDMMTTTLD 130
           I    +M+   ++
Sbjct: 512 ITVIDEMLDKLIN 524


>gi|295096224|emb|CBK85314.1| fagellar hook-basal body proteins [Enterobacter cloacae subsp.
           cloacae NCTC 9394]
          Length = 243

 Score = 40.6 bits (93), Expect = 0.070,   Method: Composition-based stats.
 Identities = 14/102 (13%), Positives = 30/102 (29%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           N     +T       +   +    +        +     Q+T          +   SG++
Sbjct: 139 NPGDPANTVAPVGRLKLVKAEGNEVQRGDDGMFRLTQAAQATRGATLQADPTIRVMSGVL 198

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NV  +    DM  + R +   ++ I    +       LL
Sbjct: 199 EGSNVKPVEAMTDMIASARRFEMQMKIISSVDENAGKANQLL 240


>gi|307609983|emb|CBW99512.1| flagellar hook-associated protein 1 [Legionella pneumophila 130b]
          Length = 649

 Score = 40.6 bits (93), Expect = 0.070,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 28/69 (40%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          ++  +IA SGL      + +   NIAN +T G +  S  +     +     +   GV V 
Sbjct: 1  MSILNIAYSGLNAFQRALDVTGNNIANFKTRGYSRQSIQFTPIASNRYAGSYIGAGVSVS 60

Query: 65 KIGVDQSTF 73
           I  +   F
Sbjct: 61 SIYRNVDQF 69



 Score = 34.1 bits (76), Expect = 7.3,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 21/42 (50%)

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
              VN+  E A++    + Y A  + ++ S+ +M    D++R
Sbjct: 608 KSGVNLDEEGANLLVFQQAYQAAGKLMEISNQIMNLLFDIMR 649


>gi|220904842|ref|YP_002480154.1| flagellar basal body rod protein FlgB [Desulfovibrio desulfuricans
           subsp. desulfuricans str. ATCC 27774]
 gi|219869141|gb|ACL49476.1| flagellar basal-body rod protein FlgB [Desulfovibrio desulfuricans
           subsp. desulfuricans str. ATCC 27774]
          Length = 137

 Score = 40.6 bits (93), Expect = 0.070,   Method: Composition-based stats.
 Identities = 22/121 (18%), Positives = 42/121 (34%), Gaps = 2/121 (1%)

Query: 1   MDYLIAS-AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
           M  L +S   +  + + +Q  R  II+ N+AN  T    P    + ++  +         
Sbjct: 1   MKSLFSSQIGLVGTVMNMQLDRQNIIAGNLANIDTPNYKPRELSFEKELQTALGQDMEGQ 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPN-VNVLVETADMRETNRLYMANLQTI 118
             R     +  +     F P    A    ++   + VN+  E A   +    + A  Q +
Sbjct: 61  MSRTSAEHIPSTFDPSSFRPEWSEAFKPRLIHGEDRVNLDKEMAKHSKNQLQFTALAQVL 120

Query: 119 K 119
            
Sbjct: 121 T 121


>gi|218778840|ref|YP_002430158.1| flagellar hook-associated protein FlgK [Desulfatibacillum
          alkenivorans AK-01]
 gi|218760224|gb|ACL02690.1| Flagellar hook-associated protein FlgK [Desulfatibacillum
          alkenivorans AK-01]
          Length = 583

 Score = 40.6 bits (93), Expect = 0.070,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 27/74 (36%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  + ++  IA   +A     M ++S N+AN  T G T  +   + K            G
Sbjct: 1  MPGIRSALDIAVGAMATHQYGMDVVSHNVANVNTEGYTLQTVINKSKVPQASGGFMFGRG 60

Query: 61 VRVKKIGVDQSTFV 74
          V   +I       V
Sbjct: 61 VETYEIRQLVDETV 74



 Score = 39.5 bits (90), Expect = 0.18,   Method: Composition-based stats.
 Identities = 7/40 (17%), Positives = 16/40 (40%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
             V++  E   + E  + Y A  + I    ++  T + + 
Sbjct: 543 SGVSLDEEMTKLIELQQSYAAAAKLITTMDEIFQTLMTIK 582


>gi|78485811|ref|YP_391736.1| hypothetical protein Tcr_1470 [Thiomicrospira crunogena XCL-2]
 gi|78364097|gb|ABB42062.1| Flagellar basal-body rod protein FlgF [Thiomicrospira crunogena
           XCL-2]
          Length = 245

 Score = 40.6 bits (93), Expect = 0.070,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 25/54 (46%)

Query: 80  GHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             P+   SG ++  NVN +    +M E +R Y   ++ +  S +    +  +L+
Sbjct: 190 QAPIRVVSGALESSNVNTVEALTNMIELSRKYEMQIKMMSTSKNHAQKSDSILK 243


>gi|238752861|ref|ZP_04614326.1| Flagellar hook-associated protein [Yersinia rohdei ATCC 43380]
 gi|238708900|gb|EEQ01153.1| Flagellar hook-associated protein [Yersinia rohdei ATCC 43380]
          Length = 452

 Score = 40.6 bits (93), Expect = 0.071,   Method: Composition-based stats.
 Identities = 8/39 (20%), Positives = 18/39 (46%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            +V+   E  ++ E  R+Y +N++ +     +    L L
Sbjct: 413 SSVDKDEEAINLMEYQRVYQSNIKVVSTGDQLFRDLLAL 451


>gi|332305621|ref|YP_004433472.1| flagellar hook-associated protein FlgK [Glaciecola agarilytica
           4H-3-7+YE-5]
 gi|332172950|gb|AEE22204.1| flagellar hook-associated protein FlgK [Glaciecola agarilytica
           4H-3-7+YE-5]
          Length = 709

 Score = 40.6 bits (93), Expect = 0.072,   Method: Composition-based stats.
 Identities = 21/127 (16%), Positives = 40/127 (31%), Gaps = 7/127 (5%)

Query: 7   SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
           +     +GL     R  +I  N+ N                 +SF E      G   +K 
Sbjct: 590 AIGYNANGLN--DNRNGLIMANLQNVNGMQLNNAGSGD---PVSFHEAYANIVGDIGQKS 644

Query: 67  GVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
                             +    V    V++  E A++    + Y A+ + +  + +M  
Sbjct: 645 ANADIAVKAGEALKLQSQDWFDSV--SGVSLDEEAANLVRFQQSYAASARLLNTAQEMFD 702

Query: 127 TTLDLLR 133
           T L ++R
Sbjct: 703 TILSMVR 709


>gi|294635611|ref|ZP_06714088.1| flagellar basal-body rod protein FlgF [Edwardsiella tarda ATCC
           23685]
 gi|291091063|gb|EFE23624.1| flagellar basal-body rod protein FlgF [Edwardsiella tarda ATCC
           23685]
          Length = 251

 Score = 40.6 bits (93), Expect = 0.072,   Method: Composition-based stats.
 Identities = 9/47 (19%), Positives = 18/47 (38%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
             G+++  NV  +    +M    R +   ++ I+   D       LL
Sbjct: 202 MPGVLEGSNVQPVEAMVNMITNARRFEMQMKVIRSVDDNEQKANQLL 248


>gi|268317787|ref|YP_003291506.1| flagellar hook-associated protein FlgK [Rhodothermus marinus DSM
           4252]
 gi|262335321|gb|ACY49118.1| flagellar hook-associated protein FlgK [Rhodothermus marinus DSM
           4252]
          Length = 464

 Score = 40.6 bits (93), Expect = 0.072,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 18/38 (47%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            V++  E  +M    + Y A  + +  +  MM T L+L
Sbjct: 427 GVSLDEELTNMIRFQQAYAATARVLDTARSMMDTLLNL 464


>gi|253702425|ref|YP_003023614.1| flagellar hook-associated protein FlgK [Geobacter sp. M21]
 gi|251777275|gb|ACT19856.1| flagellar hook-associated protein FlgK [Geobacter sp. M21]
          Length = 480

 Score = 40.6 bits (93), Expect = 0.072,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 26/59 (44%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
            IA+SG+  Q   +++  ENIAN  T G +        K ++         GV++  +
Sbjct: 7  FDIASSGVTAQRLAIEVTGENIANVNTEGYSRQQVIMETKPVTTANGFPLGTGVQIAAV 65



 Score = 39.9 bits (91), Expect = 0.13,   Method: Composition-based stats.
 Identities = 14/73 (19%), Positives = 30/73 (41%), Gaps = 2/73 (2%)

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPN--VNVLVETADMRETNRLYMANLQTIKQ 120
           V ++GVD          G         ++  N  V++  E  ++ +  R +  + + I  
Sbjct: 408 VSQVGVDTEGTQNVAGQGASFLKQLNALRSSNSEVSLDEELTNLTKYQRAFQGSAKVISA 467

Query: 121 SHDMMTTTLDLLR 133
           + DM+   L ++R
Sbjct: 468 ATDMLDIVLGMVR 480


>gi|163803175|ref|ZP_02197058.1| putative flagellar hook-associated protein [Vibrio sp. AND4]
 gi|159173075|gb|EDP57908.1| putative flagellar hook-associated protein [Vibrio sp. AND4]
          Length = 457

 Score = 40.6 bits (93), Expect = 0.073,   Method: Composition-based stats.
 Identities = 18/88 (20%), Positives = 31/88 (35%), Gaps = 2/88 (2%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          +   +IA SGL      + + ++N+AN  T G +                +    GV V 
Sbjct: 1  MNLVNIALSGLNANRVALDVTAQNVANINTPGYSRQQALMASVGDGKYNKLSPGMGVEVT 60

Query: 65 KIGVDQSTF--VEEFDPGHPVANASGIV 90
           I      F   + +      A ++G V
Sbjct: 61 SIRRVTDQFLVKQTWSTNSLAAYSAGYV 88


>gi|251789174|ref|YP_003003895.1| flagellar hook-associated protein FlgK [Dickeya zeae Ech1591]
 gi|247537795|gb|ACT06416.1| flagellar hook-associated protein FlgK [Dickeya zeae Ech1591]
          Length = 640

 Score = 40.6 bits (93), Expect = 0.073,   Method: Composition-based stats.
 Identities = 18/96 (18%), Positives = 36/96 (37%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +    +   SGL+   A +  +S NI+N    G +  +    +   +     +   GV V
Sbjct: 1  MSNLINTGMSGLSAAQAALSTVSNNISNQAVAGYSRQNALLAQNNGTNVSAGYIGNGVTV 60

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
            I  D + FV +        ++S    Y  ++ + 
Sbjct: 61 VSINRDYNDFVSKQLRSAQTTSSSTAAYYEQISKID 96


>gi|241766736|ref|ZP_04764570.1| flagellar basal body rod protein [Acidovorax delafieldii 2AN]
 gi|241362905|gb|EER58629.1| flagellar basal body rod protein [Acidovorax delafieldii 2AN]
          Length = 101

 Score = 40.6 bits (93), Expect = 0.074,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 38/119 (31%), Gaps = 29/119 (24%)

Query: 14  GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTF 73
           GL     R+   + N+AN  T+G         R+    ++      GVR        +  
Sbjct: 11  GLQAAQLRLDASANNVANMNTSG--------YRREAVAQQADADGAGVRATLQREQDAK- 61

Query: 74  VEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
                                V +  E  +       + ANLQT+K    MM + LD+ 
Sbjct: 62  --------------------GVALEQEAVEQISATYAFKANLQTLKTQDAMMGSLLDVK 100


>gi|226939373|ref|YP_002794446.1| FlgF1 [Laribacter hongkongensis HLHK9]
 gi|226714299|gb|ACO73437.1| FlgF1 [Laribacter hongkongensis HLHK9]
          Length = 247

 Score = 40.6 bits (93), Expect = 0.074,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 20/46 (43%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +G+++  NVN +     M    R +  N++ ++ +         LL
Sbjct: 198 TGMLEGSNVNPVDALTQMISHGRQFEFNVKLMQNADQNARRADQLL 243


>gi|83647167|ref|YP_435602.1| flagellar hook-associated protein [Hahella chejuensis KCTC 2396]
 gi|83635210|gb|ABC31177.1| Flagellar hook-associated protein [Hahella chejuensis KCTC 2396]
          Length = 892

 Score = 40.6 bits (93), Expect = 0.074,   Method: Composition-based stats.
 Identities = 16/98 (16%), Positives = 29/98 (29%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
               +I  +GL      +     N++NA T G +     +      F    +   GV V 
Sbjct: 3   TNVINIGLTGLKASQTALATTGNNVSNANTEGYSRQRVEFEATPSQFIGAGYLGTGVGVA 62

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETA 102
            I    + F+           +       NV+ +    
Sbjct: 63  DISRMTNQFLVSQLRSDTSMFSEIDKVRANVSQIDSLL 100


>gi|124516303|gb|EAY57811.1| probable flagellar hook protein FlgE [Leptospirillum rubarum]
          Length = 457

 Score = 40.6 bits (93), Expect = 0.075,   Method: Composition-based stats.
 Identities = 13/72 (18%), Positives = 23/72 (31%)

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
           GG    +              G   A  S  ++    ++  +  DM    R Y A+   I
Sbjct: 383 GGNAYIESIASGVPNFGRPGQGGRGALLSNSLELSTTDLGRQMVDMITAERGYQASASII 442

Query: 119 KQSHDMMTTTLD 130
              + ++ T L 
Sbjct: 443 ATDNTILNTLLT 454



 Score = 37.5 bits (85), Expect = 0.54,   Method: Composition-based stats.
 Identities = 19/87 (21%), Positives = 30/87 (34%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            +++S ++A SGL      M +I  NI N  T G   G   +             +   
Sbjct: 1  MGVLSSMYVATSGLNAMGTDMSVIGNNITNLNTVGFKQGRAVFANVYGQTMTGRSNTVNT 60

Query: 62 RVKKIGVDQSTFVEEFDPGHPVANASG 88
               GV      +EF  G   A+ + 
Sbjct: 61 SQPGSGVYVDAIQQEFTQGSVQASTNA 87


>gi|152965588|ref|YP_001361372.1| flagellar hook-associated protein FlgK [Kineococcus radiotolerans
           SRS30216]
 gi|151360105|gb|ABS03108.1| flagellar hook-associated protein FlgK [Kineococcus radiotolerans
           SRS30216]
          Length = 482

 Score = 40.6 bits (93), Expect = 0.075,   Method: Composition-based stats.
 Identities = 7/41 (17%), Positives = 18/41 (43%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             VN+  E  ++      Y A  + +    + + + L+++R
Sbjct: 442 SGVNLDEEMTNLVAYQHAYSAAAKVLTTMDEALQSLLNMVR 482



 Score = 33.7 bits (75), Expect = 7.9,   Method: Composition-based stats.
 Identities = 9/63 (14%), Positives = 18/63 (28%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           +  + A+  L      M+   +NIAN  T G +          ++              
Sbjct: 4  FSGINTASRALGAAQRGMETTGQNIANVNTPGYSRQRVEQSSSVLNQTGQFTQKYVPGDG 63

Query: 65 KIG 67
           + 
Sbjct: 64 VVV 66


>gi|239628978|ref|ZP_04672009.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239519124|gb|EEQ58990.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 246

 Score = 40.6 bits (93), Expect = 0.075,   Method: Composition-based stats.
 Identities = 7/45 (15%), Positives = 17/45 (37%), Gaps = 1/45 (2%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD-LLR 133
           ++   VN+  E     E  R + +  + +     M   T + + +
Sbjct: 201 LEQSGVNLNNEMTRAMEVQRAFQSCGKALTIIDQMNQKTANEIGK 245



 Score = 37.9 bits (86), Expect = 0.46,   Method: Composition-based stats.
 Identities = 16/82 (19%), Positives = 30/82 (36%), Gaps = 3/82 (3%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          + +  + A SG+ +    + + + NIAN +T+G  P       KT   E+++    G   
Sbjct: 1  MFSGFYTAASGMLMNQRSLDMAANNIANVKTSGYKPK---RLVKTTFNEQLVRQMNGQTQ 57

Query: 64 KKIGVDQSTFVEEFDPGHPVAN 85
                  +        H  A 
Sbjct: 58 GLGQGSTISIGTREMTTHGQAP 79


>gi|296102907|ref|YP_003613053.1| flagellar basal body rod protein FlgF [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
 gi|295057366|gb|ADF62104.1| flagellar basal body rod protein FlgF [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
          Length = 251

 Score = 40.6 bits (93), Expect = 0.076,   Method: Composition-based stats.
 Identities = 14/102 (13%), Positives = 31/102 (30%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           N     +T       +   +  + +        +     Q+T          +   SG++
Sbjct: 147 NPGDPANTVAPVGRLKLVKADGKEVQRGDDGMFRLTQAAQATRGATLQADPTIRVMSGVL 206

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NV  +    DM  + R +   ++ I    +       LL
Sbjct: 207 EGSNVKPVEAMTDMIASARRFEMQMKIISSVDENAGKANQLL 248


>gi|217076647|ref|YP_002334363.1| flagellar hook-associated protein 1 [Thermosipho africanus TCF52B]
 gi|217036500|gb|ACJ75022.1| flagellar hook-associated protein 1 [Thermosipho africanus TCF52B]
          Length = 847

 Score = 40.6 bits (93), Expect = 0.076,   Method: Composition-based stats.
 Identities = 13/102 (12%), Positives = 34/102 (33%), Gaps = 1/102 (0%)

Query: 30  ANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGI 89
           AN             +      E      GG+  +     ++    + +    + + S  
Sbjct: 739 ANTAIMEILSKMRFEKILNDGRESFAEYLGGIVAEMGVEGETAMKMKDNTDIIMKDISNE 798

Query: 90  VKY-PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            +    V++  E A+M +    + A+ + +    +M+   +D
Sbjct: 799 RERVKGVSLDEEMANMIKFQHAFNASARVMTAVDEMIGRVID 840



 Score = 35.2 bits (79), Expect = 3.4,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 19/57 (33%)

Query: 3  YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
           L  + +    G+      M ++S NIANA T G +      R         +    
Sbjct: 5  SLFGALNTGLLGVYTSKLAMNVVSHNIANANTPGFSRQVPIIRTMPPIPATTLTQPS 61


>gi|37360906|dbj|BAC98360.1| flagellar hook protein [Burkholderia glumae]
          Length = 40

 Score = 40.6 bits (93), Expect = 0.076,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 19/39 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             V++  E  ++    R Y AN QTIK    +  T L+L
Sbjct: 2   STVDLTGELVNLITAQRNYQANAQTIKTQQTVDQTLLNL 40


>gi|83858805|ref|ZP_00952327.1| flagellar basal-body rod protein FlgF [Oceanicaulis alexandrii
           HTCC2633]
 gi|83853628|gb|EAP91480.1| flagellar basal-body rod protein FlgF [Oceanicaulis alexandrii
           HTCC2633]
          Length = 244

 Score = 40.6 bits (93), Expect = 0.076,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 26/64 (40%), Gaps = 1/64 (1%)

Query: 71  STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           +    E           G ++  NV  ++E   M E +R Y +  + IK + ++    +D
Sbjct: 180 APEDAERVIEDLPQVKQGFLESSNVRPMLEITSMMEVSRAYASVSRMIKDTDELSRKAID 239

Query: 131 -LLR 133
            L R
Sbjct: 240 RLGR 243


>gi|308273543|emb|CBX30145.1| hypothetical protein N47_D29540 [uncultured Desulfobacterium sp.]
          Length = 226

 Score = 40.6 bits (93), Expect = 0.077,   Method: Composition-based stats.
 Identities = 15/109 (13%), Positives = 36/109 (33%), Gaps = 2/109 (1%)

Query: 22  MQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGH 81
           + +   NI        T   +P  +  ++  +         +     D     +      
Sbjct: 115 ITLTGNNIVIGSDGQITEDGNPGDKIFVADIKDSKLLKKEGMNYYVYDGEA--KNITSAE 172

Query: 82  PVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            V+     ++  NVNV  E   M ET R + +  + ++ + +     ++
Sbjct: 173 KVSIKQSYIEKSNVNVTEEMIRMVETLRTFESIQKALQNTDETTGKMVN 221


>gi|254993553|ref|ZP_05275743.1| flagellar hook-associated protein FlgK [Listeria monocytogenes FSL
           J2-064]
          Length = 506

 Score = 40.6 bits (93), Expect = 0.077,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 42/111 (37%), Gaps = 10/111 (9%)

Query: 22  MQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGH 81
           + +I+ +IA+ +T  +  G+                 G +        +S+     D   
Sbjct: 406 LGVIAADIASLKTDKNIQGTTF----------PSFMDGIITEVATDASKSSATSTADTQA 455

Query: 82  PVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
             + +   +    VN+  E  ++ +    Y+AN + +   +DMM   L +L
Sbjct: 456 LNSLSESKLSLEGVNIDEEMTNIMQYQSYYVANTKAMNTVNDMMKALLAML 506


>gi|299066527|emb|CBJ37717.1| Putative flagellar component of cell-proximal portion of basal-body
           rod (flgF) [Ralstonia solanacearum CMR15]
          Length = 254

 Score = 40.6 bits (93), Expect = 0.078,   Method: Composition-based stats.
 Identities = 14/106 (13%), Positives = 32/106 (30%)

Query: 25  ISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVA 84
            + N+     T       P                 ++    G+  S           V 
Sbjct: 143 AAGNVTEPNATTGPSAISPRTPIAQIKVVKFDTPKTLQRLGEGLMASGTGMTVVDDANVQ 202

Query: 85  NASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
              G ++  NV+ + E   + +T R + +  +  +   +M+ T + 
Sbjct: 203 IRQGALENGNVSSMQEMMQLIQTMRHFESVQKVTQGYDEMIGTAIR 248


>gi|148358812|ref|YP_001250019.1| hypothetical protein LPC_0694 [Legionella pneumophila str. Corby]
 gi|296106857|ref|YP_003618557.1| flagellar hook-associated protein 1 FlgK [Legionella pneumophila
          2300/99 Alcoy]
 gi|148280585|gb|ABQ54673.1| hypothetical protein LPC_0694 [Legionella pneumophila str. Corby]
 gi|295648758|gb|ADG24605.1| flagellar hook-associated protein 1 FlgK [Legionella pneumophila
          2300/99 Alcoy]
          Length = 649

 Score = 40.6 bits (93), Expect = 0.078,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 28/69 (40%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          ++  +IA SGL      + +   NIAN +T G +  S  +     +     +   GV V 
Sbjct: 1  MSILNIAYSGLNAFQRALDVTGNNIANFKTRGYSRQSIQFTPIASNRYAGSYIGAGVSVS 60

Query: 65 KIGVDQSTF 73
           I  +   F
Sbjct: 61 SIYRNVDQF 69



 Score = 34.1 bits (76), Expect = 7.6,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 21/42 (50%)

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
              VN+  E A++    + Y A  + ++ S+ +M    D++R
Sbjct: 608 KSGVNLDEEGANLLVFQQAYQAAGKLMEISNQIMNLLFDIMR 649


>gi|51596012|ref|YP_070203.1| flagellar basal body rod protein FlgF [Yersinia pseudotuberculosis
           IP 32953]
 gi|153947059|ref|YP_001401289.1| flagellar basal body rod protein FlgF [Yersinia pseudotuberculosis
           IP 31758]
 gi|170024646|ref|YP_001721151.1| flagellar basal body rod protein FlgF [Yersinia pseudotuberculosis
           YPIII]
 gi|51589294|emb|CAH20915.1| flagellar basal-body rod protein FlgF [Yersinia pseudotuberculosis
           IP 32953]
 gi|152958554|gb|ABS46015.1| flagellar basal-body rod protein FlgF [Yersinia pseudotuberculosis
           IP 31758]
 gi|169751180|gb|ACA68698.1| flagellar basal-body rod protein FlgF [Yersinia pseudotuberculosis
           YPIII]
          Length = 251

 Score = 40.6 bits (93), Expect = 0.078,   Method: Composition-based stats.
 Identities = 15/102 (14%), Positives = 31/102 (30%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           NA  + +T       ++  +    M              Q     +      V    G++
Sbjct: 147 NAGDSPNTIAQLGQIKRVQATAGEMMHGDDGLFHLTPETQQARGAQLPNDPLVKIMPGVL 206

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NV  +    DM    R +   ++ I+   +   +   LL
Sbjct: 207 EGSNVKAVEAMTDMIANARSFEMQMKVIQSVDENEQSANQLL 248


>gi|54297188|ref|YP_123557.1| flagellar hook-associated protein FlgK [Legionella pneumophila
          str. Paris]
 gi|53750973|emb|CAH12384.1| flagellar hook-associated protein 1 [Legionella pneumophila str.
          Paris]
          Length = 649

 Score = 40.6 bits (93), Expect = 0.081,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 28/69 (40%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          ++  +IA SGL      + +   NIAN +T G +  S  +     +     +   GV V 
Sbjct: 1  MSILNIAYSGLNAFQRALDVTGNNIANFKTRGYSRQSIQFTPIASNRYAGSYIGAGVSVS 60

Query: 65 KIGVDQSTF 73
           I  +   F
Sbjct: 61 SIYRNVDQF 69



 Score = 33.7 bits (75), Expect = 8.5,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 21/42 (50%)

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
              VN+  E A++    + Y A  + ++ S+ +M    D++R
Sbjct: 608 KSGVNLDEEGANLLVFQQAYQAAGKLMEISNQIMNLLFDIMR 649


>gi|308071106|ref|YP_003872711.1| flagellar hook-associated protein [Paenibacillus polymyxa E681]
 gi|305860385|gb|ADM72173.1| Flagellar hook-associated protein [Paenibacillus polymyxa E681]
          Length = 526

 Score = 40.2 bits (92), Expect = 0.082,   Method: Composition-based stats.
 Identities = 13/131 (9%), Positives = 38/131 (29%), Gaps = 6/131 (4%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
           + + +S  +  +G A +     +   N A A +             T +    +      
Sbjct: 393 NKIASSLRVDGTGTANEK----VTVGNNALALSMASLKNVKFGFNTTQAQTTTVDDFFSA 448

Query: 62  RVK--KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
            V    +   ++    +                  V++  E ++M +    Y A  + + 
Sbjct: 449 IVGQLGVQTQEAERQSQNAQLLTEQVDLNRQSVSGVSLDEEMSNMIKFQHAYSAASRFMT 508

Query: 120 QSHDMMTTTLD 130
               ++   ++
Sbjct: 509 TFDQLLDKLIN 519


>gi|260779347|ref|ZP_05888239.1| flagellar hook protein FlgE [Vibrio coralliilyticus ATCC BAA-450]
 gi|260605511|gb|EEX31806.1| flagellar hook protein FlgE [Vibrio coralliilyticus ATCC BAA-450]
          Length = 362

 Score = 40.2 bits (92), Expect = 0.083,   Method: Composition-based stats.
 Identities = 15/40 (37%), Positives = 19/40 (47%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR 46
          S +IA SGL   +  +  IS NIANA T G       +  
Sbjct: 2  SFNIALSGLDATNTELNTISHNIANASTYGFKGARTEFAA 41


>gi|220934400|ref|YP_002513299.1| flagellar hook-associated protein FlgK [Thioalkalivibrio sp.
          HL-EbGR7]
 gi|219995710|gb|ACL72312.1| flagellar hook-associated protein FlgK [Thioalkalivibrio sp.
          HL-EbGR7]
          Length = 637

 Score = 40.2 bits (92), Expect = 0.083,   Method: Composition-based stats.
 Identities = 19/88 (21%), Positives = 29/88 (32%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
               I  SGL      + +   NIAN+ T G +        +   F    +   GV+V 
Sbjct: 9  SGVLGIGVSGLLAFQRALGVTGNNIANSATEGYSRQRIDLSTQIPQFAGNGYFGSGVQVS 68

Query: 65 KIGVDQSTFVEEFDPGHPVANASGIVKY 92
           +      FVE        A+    + Y
Sbjct: 69 GVNRIFDQFVETQLRNSTSASEQYALYY 96


>gi|330501143|ref|YP_004378012.1| flagellar hook-associated protein FlgK [Pseudomonas mendocina
           NK-01]
 gi|328915429|gb|AEB56260.1| flagellar hook-associated protein FlgK [Pseudomonas mendocina
           NK-01]
          Length = 455

 Score = 40.2 bits (92), Expect = 0.084,   Method: Composition-based stats.
 Identities = 11/118 (9%), Positives = 35/118 (29%), Gaps = 2/118 (1%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFV 74
           L  +   +   +    N        G           +  ++ +    + ++  +     
Sbjct: 336 LTAEQLALSSAAGETGNNEVLLSLLGLKNQTITLNGSQVTLNDAYAGLLGQVASNSRQNQ 395

Query: 75  EEFDPGHPVANASGIVKYP--NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            +      V   +   +     V++  E  ++    + Y AN++ I  ++ +    L 
Sbjct: 396 ADLKSATAVTQQAQSQRDSVSAVSLDEEAVNLMTYQQAYQANMKVISTANQLFDDMLS 453


>gi|295690745|ref|YP_003594438.1| flagellar hook-associated protein FlgK [Caulobacter segnis ATCC
          21756]
 gi|295432648|gb|ADG11820.1| flagellar hook-associated protein FlgK [Caulobacter segnis ATCC
          21756]
          Length = 703

 Score = 40.2 bits (92), Expect = 0.084,   Method: Composition-based stats.
 Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 7/63 (11%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            L +    A SG+      +++ S+NIAN  T G       Y RKTIS   ++    G+
Sbjct: 1  MSLNSIMSTATSGMTAAQTGLRVTSDNIANVNTNG-------YVRKTISQSNMLSNGMGI 53

Query: 62 RVK 64
           V 
Sbjct: 54 GVS 56



 Score = 34.8 bits (78), Expect = 3.8,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 20/40 (50%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            VN+  E  ++    + + A+ + I+ + DM     DL+R
Sbjct: 664 GVNLDEELINLTTYQQAFNASARLIQAAKDMYDVLTDLVR 703


>gi|309779448|ref|ZP_07674209.1| flagellar basal-body rod protein FlgF [Ralstonia sp. 5_7_47FAA]
 gi|308921689|gb|EFP67325.1| flagellar basal-body rod protein FlgF [Ralstonia sp. 5_7_47FAA]
          Length = 245

 Score = 40.2 bits (92), Expect = 0.086,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 21/44 (47%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  NVN+     +M E +R     ++++  S     +  +LLR
Sbjct: 200 LEGSNVNLTDSLVNMIEISRQLEMQMKSLHTSDTNAQSANELLR 243


>gi|304317611|ref|YP_003852756.1| flagellar hook-associated protein FlgK [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302779113|gb|ADL69672.1| flagellar hook-associated protein FlgK [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 478

 Score = 40.2 bits (92), Expect = 0.086,   Method: Composition-based stats.
 Identities = 7/38 (18%), Positives = 19/38 (50%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             V++  E  +M +  + Y A+ + I    +++ T ++
Sbjct: 436 SGVSLDEEMTNMLKYQKSYEASARMITVMDELLDTLIN 473



 Score = 34.1 bits (76), Expect = 7.2,   Method: Composition-based stats.
 Identities = 11/34 (32%), Positives = 15/34 (44%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDT 38
               IA +GL      + +   NI+NA T G T
Sbjct: 4  FQGLEIAKTGLFASQQALNLTGHNISNANTPGYT 37


>gi|326792655|ref|YP_004310476.1| flagellar hook-associated protein FlgK [Clostridium lentocellum DSM
           5427]
 gi|326543419|gb|ADZ85278.1| flagellar hook-associated protein FlgK [Clostridium lentocellum DSM
           5427]
          Length = 645

 Score = 40.2 bits (92), Expect = 0.087,   Method: Composition-based stats.
 Identities = 14/113 (12%), Positives = 33/113 (29%), Gaps = 9/113 (7%)

Query: 26  SENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVAN 85
           + N+ +     +  GSD +R  +   +       G     +    S             +
Sbjct: 527 ASNMRSTYGADEESGSDLFRALSNQKDNSKMFKEGDPKDYMASIFSELGINAQEALMYQS 586

Query: 86  ASGIVKY---------PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
               V             V++  E   + +  + Y A+ + +     +  TT+
Sbjct: 587 TQESVTGIIKNQRLSVSQVDLTEEFTSLIKYQQAYQASAKIMNTIDGIYETTI 639


>gi|261339377|ref|ZP_05967235.1| flagellar basal-body rod protein FlgF [Enterobacter cancerogenus
           ATCC 35316]
 gi|288318178|gb|EFC57116.1| flagellar basal-body rod protein FlgF [Enterobacter cancerogenus
           ATCC 35316]
          Length = 251

 Score = 40.2 bits (92), Expect = 0.087,   Method: Composition-based stats.
 Identities = 14/102 (13%), Positives = 30/102 (29%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           N     +T       +   +    +        +     Q+T          +   SG++
Sbjct: 147 NPGDPANTVAPVGRLKLVKADAREVQRGDDGMFRLTQATQATRGATLQADPSIRVMSGVL 206

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NV  +    DM  + R +   ++ I    +       LL
Sbjct: 207 EGSNVKPVEAMTDMIASARRFEMQMKIISSVDENANKANQLL 248


>gi|221215572|ref|ZP_03588535.1| flagellar basal-body rod protein FlgF [Burkholderia multivorans
           CGD1]
 gi|221164560|gb|EED97043.1| flagellar basal-body rod protein FlgF [Burkholderia multivorans
           CGD1]
          Length = 252

 Score = 40.2 bits (92), Expect = 0.087,   Method: Composition-based stats.
 Identities = 9/49 (18%), Positives = 18/49 (36%)

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           A     ++  NVN +     M +  R +    + I+ +     +   LL
Sbjct: 201 AVVPNSLEGSNVNPVTAMVAMIDNARAFQLQSKLIQTADQNEQSANQLL 249


>gi|161526185|ref|YP_001581197.1| flagellar basal body rod protein FlgF [Burkholderia multivorans
           ATCC 17616]
 gi|189349099|ref|YP_001944727.1| flagellar basal body rod protein FlgF [Burkholderia multivorans
           ATCC 17616]
 gi|160343614|gb|ABX16700.1| flagellar basal-body rod protein FlgF [Burkholderia multivorans
           ATCC 17616]
 gi|189333121|dbj|BAG42191.1| flagellar basal-body rod protein [Burkholderia multivorans ATCC
           17616]
          Length = 252

 Score = 40.2 bits (92), Expect = 0.087,   Method: Composition-based stats.
 Identities = 9/49 (18%), Positives = 18/49 (36%)

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           A     ++  NVN +     M +  R +    + I+ +     +   LL
Sbjct: 201 AVVPNSLEGSNVNPVTAMVAMIDNARAFQLQSKLIQTADQNEQSANQLL 249


>gi|23100411|ref|NP_693878.1| flagellar hook-basal body protein [Oceanobacillus iheyensis HTE831]
 gi|22778644|dbj|BAC14912.1| flagellar hook-basal body protein [Oceanobacillus iheyensis HTE831]
          Length = 276

 Score = 40.2 bits (92), Expect = 0.087,   Method: Composition-based stats.
 Identities = 17/86 (19%), Positives = 36/86 (41%), Gaps = 1/86 (1%)

Query: 46  RKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
           R  +      +      ++ +G +    ++E +P   +  +   ++  NV++  E +D+ 
Sbjct: 190 RPRLLESTGQNLFQLPNLEALGFNAEEIIQETNPQTAILQSKA-LEQSNVDISKEMSDLL 248

Query: 106 ETNRLYMANLQTIKQSHDMMTTTLDL 131
            T RLY  N +TI     MM     +
Sbjct: 249 MTQRLYQFNSRTITMGDQMMGLVNQI 274


>gi|319781687|ref|YP_004141163.1| flagellar basal-body rod protein FlgF [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317167575|gb|ADV11113.1| flagellar basal-body rod protein FlgF [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 240

 Score = 40.2 bits (92), Expect = 0.088,   Method: Composition-based stats.
 Identities = 14/102 (13%), Positives = 32/102 (31%), Gaps = 3/102 (2%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVAN---AS 87
           N        GS     + +    + +   G    + G          +P    ++   A 
Sbjct: 133 NGPPKAGADGSLRQNDQLVGSIGLYNFDPGANFVRYGNSGIVPARTPEPVTDRSDIGVAQ 192

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
           G ++  NVN ++E   +    R +      ++Q+       +
Sbjct: 193 GFLEESNVNPVLEITRLIMVQRAFENTAALMRQTDSSTDEAI 234


>gi|221199740|ref|ZP_03572783.1| flagellar basal-body rod protein FlgF [Burkholderia multivorans
           CGD2M]
 gi|221208655|ref|ZP_03581655.1| flagellar basal-body rod protein FlgF [Burkholderia multivorans
           CGD2]
 gi|221171466|gb|EEE03913.1| flagellar basal-body rod protein FlgF [Burkholderia multivorans
           CGD2]
 gi|221179979|gb|EEE12383.1| flagellar basal-body rod protein FlgF [Burkholderia multivorans
           CGD2M]
          Length = 252

 Score = 40.2 bits (92), Expect = 0.089,   Method: Composition-based stats.
 Identities = 9/49 (18%), Positives = 18/49 (36%)

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           A     ++  NVN +     M +  R +    + I+ +     +   LL
Sbjct: 201 AVVPNSLEGSNVNPVTAMVAMIDNARAFQLQSKLIQTADQNEQSANQLL 249


>gi|332162900|ref|YP_004299477.1| flagellar basal-body rod protein FlgF [Yersinia enterocolitica
           subsp. palearctica 105.5R(r)]
 gi|325667130|gb|ADZ43774.1| Flagellar basal-body rod protein FlgF [Yersinia enterocolitica
           subsp. palearctica 105.5R(r)]
 gi|330863350|emb|CBX73473.1| hypothetical protein YEW_ES20680 [Yersinia enterocolitica W22703]
          Length = 243

 Score = 40.2 bits (92), Expect = 0.090,   Method: Composition-based stats.
 Identities = 6/45 (13%), Positives = 22/45 (48%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  N++ + E       +R + A ++ +K + ++  +   ++R
Sbjct: 197 HLESSNISAISEMTASISLSRQFEAQIKMMKVAEELAQSGNRIIR 241


>gi|226327744|ref|ZP_03803262.1| hypothetical protein PROPEN_01617 [Proteus penneri ATCC 35198]
 gi|225203448|gb|EEG85802.1| hypothetical protein PROPEN_01617 [Proteus penneri ATCC 35198]
          Length = 98

 Score = 40.2 bits (92), Expect = 0.090,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 16/43 (37%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           ++  NVN      DM    R +   ++ I  + D       LL
Sbjct: 53  LEGSNVNPAEAMVDMIANARRFEMQMKVIHSADDNAQRANQLL 95


>gi|206603517|gb|EDZ39997.1| Flagellar hook-associated protein (FlgK) [Leptospirillum sp.
          Group II '5-way CG']
          Length = 561

 Score = 40.2 bits (92), Expect = 0.090,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 29/73 (39%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  ++   +I  SG+    A +    +NI+N  T G T  +  + +   +         G
Sbjct: 1  MSGVLGILNIGKSGIEANEAGLSTAGQNISNVNTPGYTVENVQFDQTQPNHGSPGMVGNG 60

Query: 61 VRVKKIGVDQSTF 73
          VR   I    ++F
Sbjct: 61 VRATGIRRVVNSF 73


>gi|160939652|ref|ZP_02087000.1| hypothetical protein CLOBOL_04544 [Clostridium bolteae ATCC
           BAA-613]
 gi|158437443|gb|EDP15207.1| hypothetical protein CLOBOL_04544 [Clostridium bolteae ATCC
           BAA-613]
          Length = 246

 Score = 40.2 bits (92), Expect = 0.090,   Method: Composition-based stats.
 Identities = 7/45 (15%), Positives = 17/45 (37%), Gaps = 1/45 (2%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD-LLR 133
           ++   VN+  E     E  R + +  + +     M   T + + +
Sbjct: 201 LEQSGVNLNNEMTRAMEVQRAFQSCGKALTIIDQMNQKTANEIGK 245



 Score = 37.9 bits (86), Expect = 0.52,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 20/38 (52%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGS 41
          + +  + A SG+ +    + + + NIAN +T+G  P  
Sbjct: 1  MFSGFYTAASGMLMNQRSLNMAANNIANVKTSGYKPKR 38


>gi|116626491|ref|YP_828647.1| flagellar basal body rod protein [Candidatus Solibacter usitatus
          Ellin6076]
 gi|116229653|gb|ABJ88362.1| flagellar basal body rod protein [Candidatus Solibacter usitatus
          Ellin6076]
          Length = 241

 Score = 40.2 bits (92), Expect = 0.090,   Method: Composition-based stats.
 Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 3/63 (4%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          MD L A   IA SGL  +   + +++ N+ANA T G     + Y   T            
Sbjct: 1  MDPLTA---IAASGLRARMESLDLLANNVANASTGGYKADREFYSLYTAPEAAGDGSLST 57

Query: 61 VRV 63
          + V
Sbjct: 58 MPV 60


>gi|323967018|gb|EGB62444.1| flagellar basal-body rod protein FlgF [Escherichia coli M863]
 gi|327253476|gb|EGE65114.1| flagellar basal-body rod protein FlgF [Escherichia coli STEC_7v]
          Length = 251

 Score = 40.2 bits (92), Expect = 0.091,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 33/102 (32%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           N+    +T       +   +    +        +     Q+T          +   SG++
Sbjct: 147 NSGDPANTVAPVGRLKLVKATGSEVQRGDDGMFRLSAESQATRGPVLQADPTLRVMSGVL 206

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NVN +   +DM  + R +   ++ I    D       LL
Sbjct: 207 EGSNVNAVAAMSDMIASARRFEMQMKVISSVDDNAGRANQLL 248


>gi|302387773|ref|YP_003823595.1| fagellar hook-basal body protein [Clostridium saccharolyticum WM1]
 gi|302198401|gb|ADL05972.1| fagellar hook-basal body protein [Clostridium saccharolyticum WM1]
          Length = 267

 Score = 40.2 bits (92), Expect = 0.091,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 21/45 (46%), Gaps = 1/45 (2%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL-DLLR 133
           ++  N++ + E   M  + R   +  Q +K    +M+  + D+ R
Sbjct: 222 IERSNIDPIEEMTSMMSSQRASQSAAQVLKMYDQLMSRIVSDIGR 266


>gi|227873523|ref|ZP_03991768.1| possible flagellar basal body rod protein [Oribacterium sinus
           F0268]
 gi|227840613|gb|EEJ50998.1| possible flagellar basal body rod protein [Oribacterium sinus
           F0268]
          Length = 263

 Score = 40.2 bits (92), Expect = 0.091,   Method: Composition-based stats.
 Identities = 15/107 (14%), Positives = 34/107 (31%), Gaps = 4/107 (3%)

Query: 25  ISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVA 84
              N ANA    +                +++        + G   +      +P     
Sbjct: 159 TGGNTANANNATEEVKQKIGVYTINYPSRLVNKGDNELAIRPGDQNNKDSVIQNPI---- 214

Query: 85  NASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             SG ++    ++  E   + E+ R +   L+ ++ S ++  T   L
Sbjct: 215 LESGTLESSGTDMAKEMTRLIESQRAFTYALKMVQTSDEVEGTINQL 261


>gi|220932550|ref|YP_002509458.1| flagellar hook-associated protein FlgK [Halothermothrix orenii H
           168]
 gi|219993860|gb|ACL70463.1| flagellar hook-associated protein FlgK [Halothermothrix orenii H
           168]
          Length = 471

 Score = 40.2 bits (92), Expect = 0.091,   Method: Composition-based stats.
 Identities = 16/140 (11%), Positives = 40/140 (28%), Gaps = 15/140 (10%)

Query: 3   YLIASAHIANSGLA---VQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS- 58
               S+      ++      + +  I+   A     G   G +      +     M G+ 
Sbjct: 332 DFFDSSKTTADTMSLDSAIESDLNAIA---AAQTGGGVGDGRNAEAIAELQNALTMSGNK 388

Query: 59  ---GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKY-----PNVNVLVETADMRETNRL 110
                     I        +              ++        V++  E A+M +  + 
Sbjct: 389 STFNEFYTSIISGLGVEAEKANMMYDNQEVMINNLENKQASISGVSLDEEMANMIKFQQA 448

Query: 111 YMANLQTIKQSHDMMTTTLD 130
           Y A  + + +  +M+ T ++
Sbjct: 449 YNAAAKMVSKVDEMLNTLIN 468


>gi|192360677|ref|YP_001982399.1| flagellar basal-body rod protein FlgF [Cellvibrio japonicus
           Ueda107]
 gi|190686842|gb|ACE84520.1| flagellar basal-body rod protein FlgF [Cellvibrio japonicus
           Ueda107]
          Length = 295

 Score = 40.2 bits (92), Expect = 0.091,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 25/56 (44%)

Query: 78  DPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            P   V   +G+++  NVN + E   +    R Y   ++ +K + +    +  LL+
Sbjct: 238 QPAVDVTLRAGMLEASNVNAVTEFTQIMSLARQYEMQVKVMKAAEENSAASTQLLQ 293


>gi|124516723|gb|EAY58231.1| Flagellar hook-associated protein FlgK [Leptospirillum rubarum]
          Length = 561

 Score = 40.2 bits (92), Expect = 0.091,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 29/73 (39%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  ++   +I  SG+    A +    +NI+N  T G T  +  + +   +         G
Sbjct: 1  MSGVLGILNIGKSGIEANEAGLSTAGQNISNVNTPGYTVENVQFDQSQPNHGSPGMVGNG 60

Query: 61 VRVKKIGVDQSTF 73
          VR   I    ++F
Sbjct: 61 VRATGIRRVVNSF 73


>gi|294664592|ref|ZP_06729933.1| flagellar protein [Xanthomonas fuscans subsp. aurantifolii str.
           ICPB 10535]
 gi|292605649|gb|EFF48959.1| flagellar protein [Xanthomonas fuscans subsp. aurantifolii str.
           ICPB 10535]
          Length = 249

 Score = 40.2 bits (92), Expect = 0.092,   Method: Composition-based stats.
 Identities = 17/110 (15%), Positives = 36/110 (32%)

Query: 22  MQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGH 81
           M+I S+   +    G+ P +     K    +             +    +   + F    
Sbjct: 137 MEIGSDGSISIIPQGEGPQTMAIVGKMKVVDAPADRLTRRPDGLMRNTSTDPAQAFAVAT 196

Query: 82  PVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
                SG+++  NV+      +M +  R +   ++ IK   D   +   L
Sbjct: 197 GKTINSGMLEGSNVDAAGALVEMIQLQRQFEMQVKIIKNGDDNGQSANSL 246


>gi|126738558|ref|ZP_01754263.1| flagellar hook-associated protein K [Roseobacter sp. SK209-2-6]
 gi|126720357|gb|EBA17063.1| flagellar hook-associated protein K [Roseobacter sp. SK209-2-6]
          Length = 484

 Score = 40.2 bits (92), Expect = 0.092,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 18/38 (47%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            V+   E  ++    R Y AN + ++   +MM T L +
Sbjct: 447 GVDSDAELQNLMIIERAYAANAKMLEAVDEMMQTLLRI 484



 Score = 34.8 bits (78), Expect = 4.2,   Method: Composition-based stats.
 Identities = 19/107 (17%), Positives = 38/107 (35%), Gaps = 2/107 (1%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             + ++ + A SGL   +   Q++SEN+ANA T G +         + +    + G   +
Sbjct: 1   MTITSAINSAMSGLTANARSSQVVSENLANALTPGYSAQRLNLSTNSYTGGTKVDGVERL 60

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
               +     T   E       AN     +  ++  +V+        
Sbjct: 61  IDPALQASARTAEAEHSAAETYAN--FYSRMSSLVGVVDDDTSISAQ 105


>gi|83310488|ref|YP_420752.1| flagellar hook protein FlgE [Magnetospirillum magneticum AMB-1]
 gi|82945329|dbj|BAE50193.1| Flagellar hook protein FlgE [Magnetospirillum magneticum AMB-1]
          Length = 545

 Score = 40.2 bits (92), Expect = 0.092,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 17/41 (41%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  NV +  +   M  T + Y  N    K + +M  T  DL
Sbjct: 503 ESSNVALEDQFTRMIVTQKAYSVNSNVFKTADEMTQTIRDL 543


>gi|257871308|ref|ZP_05650961.1| flagellar basal-body rod protein flgG [Enterococcus gallinarum EG2]
 gi|257805472|gb|EEV34294.1| flagellar basal-body rod protein flgG [Enterococcus gallinarum EG2]
          Length = 260

 Score = 40.2 bits (92), Expect = 0.093,   Method: Composition-based stats.
 Identities = 11/58 (18%), Positives = 25/58 (43%)

Query: 69  DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           DQ+    + +P    +   G +    V++     D+  T R Y  N + ++ + +M +
Sbjct: 196 DQALLTSQTNPAAFGSVLQGQLVQSTVDLATSMTDLLTTQRAYGLNTKAMQTADEMWS 253



 Score = 34.1 bits (76), Expect = 6.8,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 17/45 (37%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR 46
            +     I+ SGL      +   + NIAN  T G    +  ++ 
Sbjct: 1  MNISGLLGISRSGLNHLQTNLDTTANNIANVNTNGYQAQTTHFQA 45


>gi|85710165|ref|ZP_01041230.1| flagellar basal-body rod protein [Erythrobacter sp. NAP1]
 gi|85688875|gb|EAQ28879.1| flagellar basal-body rod protein [Erythrobacter sp. NAP1]
          Length = 247

 Score = 40.2 bits (92), Expect = 0.093,   Method: Composition-based stats.
 Identities = 17/100 (17%), Positives = 30/100 (30%), Gaps = 2/100 (2%)

Query: 33  RTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKY 92
            +    PG +P     I        +               V   DP   V    G ++ 
Sbjct: 147 ASDPAAPGEEPAAIDRIKLASPQGSALAKGTDSFLRVPGGGVLPTDPTARV--IPGALEG 204

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
            NV       DM +  R +    + I+ + ++   +  LL
Sbjct: 205 SNVETAGTLIDMIDAQRAFEQRARIIQTAGELDEASSRLL 244



 Score = 34.5 bits (77), Expect = 5.8,   Method: Composition-based stats.
 Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 3/36 (8%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTG 36
          MD L    + A +G+     R ++++ N+ANA T G
Sbjct: 1  MDRL---IYTALTGMDASMNRQRMVANNLANASTPG 33


>gi|323976550|gb|EGB71638.1| flagellar basal-body rod protein FlgF [Escherichia coli TW10509]
          Length = 251

 Score = 40.2 bits (92), Expect = 0.093,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 33/102 (32%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           N+    +T       +   +    +        +     Q+T          +   SG++
Sbjct: 147 NSGDPANTVAPVGRLKLVKATGSEVQRGDDGIFRLSAESQATRGPVLQADPTLRVMSGVL 206

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NVN +   +DM  + R +   ++ I    D       LL
Sbjct: 207 EGSNVNAVAAMSDMIASARRFEMQMKVISSVDDNAGRANQLL 248


>gi|114706768|ref|ZP_01439668.1| flagellar basal-body rod protein B [Fulvimarina pelagi HTCC2506]
 gi|114537716|gb|EAU40840.1| flagellar basal-body rod protein B [Fulvimarina pelagi HTCC2506]
          Length = 126

 Score = 40.2 bits (92), Expect = 0.093,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 37/113 (32%), Gaps = 6/113 (5%)

Query: 19  SARMQIISENIANARTTGDTP-GSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEF 77
           S R  +++EN+AN  T G T     P+ +   +       S    +   G   +      
Sbjct: 18  SHRQALVAENVANVNTPGYTAKDITPFEQVLDNTALAQTASNPKHLVGFGGGTAEAEATE 77

Query: 78  DPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
                           +V V  E     E +R Y  N   +K  H M  TT+ 
Sbjct: 78  AVT-----WDVKHSGNSVAVEQEMMKAGEVSRDYSLNTSIVKSFHRMFMTTIR 125


>gi|262652|gb|AAB24738.1| flagellar basal body proximal rod protein [Caulobacter vibrioides]
          Length = 248

 Score = 40.2 bits (92), Expect = 0.093,   Method: Composition-based stats.
 Identities = 8/48 (16%), Positives = 20/48 (41%)

Query: 77  FDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
             P        G+++  NV  ++E   + E  R Y +  + +  + ++
Sbjct: 186 PQPVTDAQIHQGMLEASNVQPVIEITKLIEIQRAYESVAKMMDNTAEL 233


>gi|269792949|ref|YP_003317853.1| flagellar basal-body rod protein FlgB [Thermanaerovibrio
           acidaminovorans DSM 6589]
 gi|269100584|gb|ACZ19571.1| flagellar basal-body rod protein FlgB [Thermanaerovibrio
           acidaminovorans DSM 6589]
          Length = 134

 Score = 40.2 bits (92), Expect = 0.094,   Method: Composition-based stats.
 Identities = 22/121 (18%), Positives = 40/121 (33%), Gaps = 2/121 (1%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFV 74
           L   S RM  +++N+ANA T         +  +  +  +           +  +      
Sbjct: 14  LEGLSRRMGAVAQNVANANTPRYARREVSFEDQLAAVIDQPRRLPLAVSDQRHMTNVPLG 73

Query: 75  EEF-DPGHPVANASGIVK-YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
            +   P               NV+  VE A + ET  +Y A  + + +   M  T +   
Sbjct: 74  LDNVKPREDRVEDEIYRYDGNNVDPEVEMAKLAETRMMYQAMSRVLSRKVAMYRTAIGGG 133

Query: 133 R 133
           R
Sbjct: 134 R 134


>gi|291562042|emb|CBL40858.1| fagellar hook-basal body proteins [butyrate-producing bacterium
           SS3/4]
          Length = 263

 Score = 40.2 bits (92), Expect = 0.095,   Method: Composition-based stats.
 Identities = 10/57 (17%), Positives = 19/57 (33%)

Query: 75  EEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            E           G ++    ++  E   + E  R +   ++ I  S D+  T   L
Sbjct: 205 MEASLKSDAVLQKGALENSGTDMAKEMVHVIECQRAFSYAVKMITTSDDIEGTINSL 261


>gi|147678447|ref|YP_001212662.1| flagellar hook-associated protein FlgK [Pelotomaculum
           thermopropionicum SI]
 gi|146274544|dbj|BAF60293.1| flagellar hook-associated protein [Pelotomaculum thermopropionicum
           SI]
          Length = 471

 Score = 40.2 bits (92), Expect = 0.095,   Method: Composition-based stats.
 Identities = 6/38 (15%), Positives = 15/38 (39%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             V++  E   + +    Y    + I    +M+ T ++
Sbjct: 430 SGVSMDEEMTSLIQYQYAYQGAARVITVLDEMLDTLIN 467


>gi|325927872|ref|ZP_08189096.1| flagellar basal-body rod protein FlgB [Xanthomonas perforans
           91-118]
 gi|325541712|gb|EGD13230.1| flagellar basal-body rod protein FlgB [Xanthomonas perforans
           91-118]
          Length = 179

 Score = 40.2 bits (92), Expect = 0.096,   Method: Composition-based stats.
 Identities = 17/125 (13%), Positives = 35/125 (28%), Gaps = 1/125 (0%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
               +   +    L ++  RM++I+ N++N  T G       +     S +    G    
Sbjct: 49  SPFSSFLGVHGDALTLREQRMKLIASNLSNVDTPGYKAKDLNFEAALKSAQGEQDGGLLQ 108

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ- 120
                  +                    +    V+   E A        Y A+L  ++  
Sbjct: 109 TTDAKHYEVGGGAGLNPFQFTREADQPSLDGNTVDPDAERAAYGRAALEYRASLSFLESK 168

Query: 121 SHDMM 125
              M+
Sbjct: 169 VRSML 173


>gi|320179224|gb|EFW54182.1| Flagellar hook protein FlgE [Shigella boydii ATCC 9905]
          Length = 389

 Score = 40.2 bits (92), Expect = 0.096,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 20/40 (50%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           +     +G ++  NV++  E  +M    R Y +N QTIK 
Sbjct: 350 NFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKT 389



 Score = 34.8 bits (78), Expect = 3.5,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 4/63 (6%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          +   A SGL   +  + +I  NIAN+ T G   G+  +               GV+V  I
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFA----DMFAGSKVGLGVKVAGI 57

Query: 67 GVD 69
            D
Sbjct: 58 TQD 60


>gi|258511107|ref|YP_003184541.1| hypothetical protein Aaci_1117 [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
 gi|257477833|gb|ACV58152.1| protein of unknown function DUF1078 domain protein
           [Alicyclobacillus acidocaldarius subsp. acidocaldarius
           DSM 446]
          Length = 69

 Score = 40.2 bits (92), Expect = 0.096,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 18/41 (43%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            NVN+  +  D+ +  R Y AN      +  M  T L + +
Sbjct: 29  ANVNLTTQMVDLIQATRAYQANATAFDAAKQMAVTALSIGK 69



 Score = 34.1 bits (76), Expect = 6.5,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 23/60 (38%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          S +I+ SGLA     + +I+ NIAN   T          R   +       +  + V  +
Sbjct: 6  SMNISASGLAANQLWLNVIANNIANVNLTTQMVDLIQATRAYQANATAFDAAKQMAVTAL 65


>gi|153837083|ref|ZP_01989750.1| flagellar hook-associated protein FlgK [Vibrio parahaemolyticus
          AQ3810]
 gi|149749671|gb|EDM60416.1| flagellar hook-associated protein FlgK [Vibrio parahaemolyticus
          AQ3810]
          Length = 457

 Score = 40.2 bits (92), Expect = 0.097,   Method: Composition-based stats.
 Identities = 18/95 (18%), Positives = 31/95 (32%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          +   +IA SGL      + + ++N+AN  T G +                +    GV V 
Sbjct: 1  MNLVNIALSGLNANRVALDVTAQNVANVNTPGYSRQQALMATVGDGKSNRLSSGMGVEVT 60

Query: 65 KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
           I      F+ +         A       N++ L 
Sbjct: 61 SIRRVTDQFLVKQTWSTNSLAAYAAGYTSNMSQLE 95


>gi|15895409|ref|NP_348758.1| flagellar basal body rod protein FlgG [Clostridium acetobutylicum
           ATCC 824]
 gi|15025132|gb|AAK80098.1|AE007715_3 Flagellar basal body rod protein [Clostridium acetobutylicum ATCC
           824]
          Length = 258

 Score = 40.2 bits (92), Expect = 0.097,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 23/41 (56%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           ++  NVNV+    DM  T R++ +N +T++   + +   ++
Sbjct: 213 LEGSNVNVMKGMTDMMTTMRVFESNQKTVQSIDETVGKAVN 253



 Score = 34.5 bits (77), Expect = 5.2,   Method: Composition-based stats.
 Identities = 13/38 (34%), Positives = 21/38 (55%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGS 41
          ++   + A SG+ VQ A+  +I+ N+AN  T G    S
Sbjct: 1  MVRGLYTAISGMVVQEAKQDVITNNLANTNTVGFKSDS 38


>gi|90577345|ref|ZP_01233156.1| putative flagellar basal-body rod protein [Vibrio angustum S14]
 gi|90440431|gb|EAS65611.1| putative flagellar basal-body rod protein [Vibrio angustum S14]
          Length = 243

 Score = 40.2 bits (92), Expect = 0.097,   Method: Composition-based stats.
 Identities = 10/58 (17%), Positives = 24/58 (41%)

Query: 75  EEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           + F     VA  +G ++  NV+ + E   +    R +   ++ +K +  +      L+
Sbjct: 183 QVFAQDPSVAMTAGHLEGSNVSAINELVSVMSLTRNFEMQVRMMKTAETLAQAGTRLM 240


>gi|149927799|ref|ZP_01916050.1| hypothetical protein LMED105_11310 [Limnobacter sp. MED105]
 gi|149823421|gb|EDM82652.1| hypothetical protein LMED105_11310 [Limnobacter sp. MED105]
          Length = 245

 Score = 40.2 bits (92), Expect = 0.098,   Method: Composition-based stats.
 Identities = 9/44 (20%), Positives = 16/44 (36%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           G ++  NVN +     M    R Y   ++ I  + +       L
Sbjct: 198 GFIESSNVNAVDMMVQMITAARQYETQMKMISTAKENGQAANSL 241


>gi|260899395|ref|ZP_05907790.1| flagellar hook-associated protein FlgK [Vibrio parahaemolyticus
          AQ4037]
 gi|308109296|gb|EFO46836.1| flagellar hook-associated protein FlgK [Vibrio parahaemolyticus
          AQ4037]
          Length = 457

 Score = 40.2 bits (92), Expect = 0.099,   Method: Composition-based stats.
 Identities = 18/95 (18%), Positives = 31/95 (32%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          +   +IA SGL      + + ++N+AN  T G +                +    GV V 
Sbjct: 1  MNLVNIALSGLNANRVALDVTAQNVANVNTPGYSRQQALMATVGDGKSNRLSSGMGVEVT 60

Query: 65 KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
           I      F+ +         A       N++ L 
Sbjct: 61 SIRRVTDQFLVKQTWSTNSLAAYAAGYTSNMSQLE 95


>gi|24217008|ref|NP_714489.1| flagellar hook-associated protein FlgK [Leptospira interrogans
           serovar Lai str. 56601]
 gi|24198413|gb|AAN51507.1| flagellar hook-associated protein FlgK [Leptospira interrogans
           serovar Lai str. 56601]
          Length = 636

 Score = 40.2 bits (92), Expect = 0.100,   Method: Composition-based stats.
 Identities = 13/82 (15%), Positives = 34/82 (41%), Gaps = 2/82 (2%)

Query: 51  FEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP--NVNVLVETADMRETN 108
           + +         + K+G +     +EF   + +      ++     VN+  E A+M +  
Sbjct: 551 YSKTTDDFYNTLISKLGTEAREAKQEFGIQNDLMTELENMRQSVMGVNLDEEMANMVQFQ 610

Query: 109 RLYMANLQTIKQSHDMMTTTLD 130
             Y A+ + I   ++++ T ++
Sbjct: 611 HAYNASAKMINTMNEILDTIIN 632



 Score = 36.8 bits (83), Expect = 0.93,   Method: Composition-based stats.
 Identities = 9/59 (15%), Positives = 17/59 (28%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          M    +   I   GL      +Q    NI+NA                  ++  ++ + 
Sbjct: 1  MGSTFSGLEIGKRGLTAHQQALQTTGHNISNADNKHYARQRVTMTAMDPLYDPSLNRAN 59


>gi|28900128|ref|NP_799783.1| putative flagellar hook-associated protein [Vibrio
          parahaemolyticus RIMD 2210633]
 gi|260365778|ref|ZP_05778274.1| flagellar hook-associated protein FlgK [Vibrio parahaemolyticus
          K5030]
 gi|260880700|ref|ZP_05893055.1| flagellar hook-associated protein FlgK [Vibrio parahaemolyticus
          AN-5034]
 gi|260897694|ref|ZP_05906190.1| flagellar hook-associated protein FlgK [Vibrio parahaemolyticus
          Peru-466]
 gi|28808411|dbj|BAC61616.1| putative flagellar hook-associated protein [Vibrio
          parahaemolyticus RIMD 2210633]
 gi|308086274|gb|EFO35969.1| flagellar hook-associated protein FlgK [Vibrio parahaemolyticus
          Peru-466]
 gi|308092694|gb|EFO42389.1| flagellar hook-associated protein FlgK [Vibrio parahaemolyticus
          AN-5034]
 gi|308114946|gb|EFO52486.1| flagellar hook-associated protein FlgK [Vibrio parahaemolyticus
          K5030]
          Length = 457

 Score = 40.2 bits (92), Expect = 0.10,   Method: Composition-based stats.
 Identities = 18/95 (18%), Positives = 31/95 (32%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          +   +IA SGL      + + ++N+AN  T G +                +    GV V 
Sbjct: 1  MNLVNIALSGLNANRVALDVTAQNVANVNTPGYSRQQALMATVGDGKSNRLSSGMGVEVT 60

Query: 65 KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
           I      F+ +         A       N++ L 
Sbjct: 61 SIRRVTDQFLVKQTWSTNSLAAYAAGYTSNMSQLE 95


>gi|326796596|ref|YP_004314416.1| flagellar basal-body rod protein FlgF [Marinomonas mediterranea
           MMB-1]
 gi|326547360|gb|ADZ92580.1| flagellar basal-body rod protein FlgF [Marinomonas mediterranea
           MMB-1]
          Length = 245

 Score = 40.2 bits (92), Expect = 0.10,   Method: Composition-based stats.
 Identities = 9/37 (24%), Positives = 18/37 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
           SG ++  NVN + E  ++ E  R +  N++ +     
Sbjct: 198 SGFLEGSNVNAVEEMTEIMELARRFEMNIKVMDSVRQ 234


>gi|318604253|emb|CBY25751.1| flagellar basal-body rod protein FlgF [Yersinia enterocolitica
           subsp. palearctica Y11]
          Length = 243

 Score = 40.2 bits (92), Expect = 0.10,   Method: Composition-based stats.
 Identities = 6/45 (13%), Positives = 22/45 (48%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  N++ + E       +R + A ++ +K + ++  +   ++R
Sbjct: 197 HLESSNISAISEMTASISLSRQFEAQIKMMKVAEELAQSGNRIIR 241


>gi|149182549|ref|ZP_01861021.1| flagellar hook-associated protein [Bacillus sp. SG-1]
 gi|148849741|gb|EDL63919.1| flagellar hook-associated protein [Bacillus sp. SG-1]
          Length = 529

 Score = 40.2 bits (92), Expect = 0.10,   Method: Composition-based stats.
 Identities = 18/121 (14%), Positives = 35/121 (28%), Gaps = 17/121 (14%)

Query: 27  ENIANAR----TTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK--------IGVDQSTFV 74
           +NIANA         T  S    + T    +        ++          IG       
Sbjct: 402 DNIANADGSKPEEATTGDSSVLLQLTEVINKNFDYGQNSQMANFRNYYEVLIGGMAVDAQ 461

Query: 75  EEFDPGHPVANASGIVKY-----PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
                    A     V+        V++  E  +M +    Y A+ + I    +++   +
Sbjct: 462 NAVRLTDNSATLRQAVEERRMSTSAVSLDEEMTNMIQYQHAYNASARMISLQDELLDKII 521

Query: 130 D 130
           +
Sbjct: 522 N 522



 Score = 36.4 bits (82), Expect = 1.4,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 21/59 (35%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          M         A  G+  Q + +Q+   N+ANA T G T     + +        M+   
Sbjct: 1  MRSTFQGLETARRGMYTQQSALQVTGHNVANANTLGFTRQRINFEQTETYPPPAMNKPQ 59


>gi|116326933|ref|YP_796653.1| flagellar hook-associated protein FlgK [Leptospira borgpetersenii
           serovar Hardjo-bovis L550]
 gi|116332402|ref|YP_802120.1| flagellar hook-associated protein FlgK [Leptospira borgpetersenii
           serovar Hardjo-bovis JB197]
 gi|116119677|gb|ABJ77720.1| Endoflagellar hook junction protein [Leptospira borgpetersenii
           serovar Hardjo-bovis L550]
 gi|116126091|gb|ABJ77362.1| Endoflagellar hook junction protein [Leptospira borgpetersenii
           serovar Hardjo-bovis JB197]
          Length = 636

 Score = 40.2 bits (92), Expect = 0.10,   Method: Composition-based stats.
 Identities = 13/82 (15%), Positives = 34/82 (41%), Gaps = 2/82 (2%)

Query: 51  FEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP--NVNVLVETADMRETN 108
           + +         + K+G +     +EF   + +      ++     VN+  E A+M +  
Sbjct: 551 YSKTTDDFYNTLISKLGTEAREAKQEFGIQNDLMTELENMRQSVMGVNLDEEMANMVQFQ 610

Query: 109 RLYMANLQTIKQSHDMMTTTLD 130
             Y A+ + I   ++++ T ++
Sbjct: 611 HSYNASAKMINTINEILDTIIN 632



 Score = 36.8 bits (83), Expect = 1.1,   Method: Composition-based stats.
 Identities = 9/59 (15%), Positives = 17/59 (28%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          M    +   I   GL      +Q    NI+NA                  ++  ++ + 
Sbjct: 1  MGSTFSGLEIGKRGLTAHQQALQTTGHNISNADNKHYARQRVTMTAMDPLYDPSLNRAN 59


>gi|89095666|ref|ZP_01168560.1| FlhP [Bacillus sp. NRRL B-14911]
 gi|89089412|gb|EAR68519.1| FlhP [Bacillus sp. NRRL B-14911]
          Length = 274

 Score = 40.2 bits (92), Expect = 0.10,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 17/42 (40%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           ++  NVN+  E  D+    R Y    + I  +  MM     +
Sbjct: 232 LEQSNVNMQKEMTDLITVQRAYQFQSRAISMADQMMGLVNGI 273


>gi|124268257|ref|YP_001022261.1| flagellar basal body protein [Methylibium petroleiphilum PM1]
 gi|124261032|gb|ABM96026.1| flagellar basal body protein [Methylibium petroleiphilum PM1]
          Length = 150

 Score = 40.2 bits (92), Expect = 0.10,   Method: Composition-based stats.
 Identities = 28/131 (21%), Positives = 46/131 (35%), Gaps = 1/131 (0%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD L  S +     L ++S R ++I+ NIANA T G       +                
Sbjct: 18  MDRLTNSLNFQTQALLLRSERQRLIASNIANADTPGYQARDMDFGAALREATGAATPGNA 77

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVA-NASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           +   + G    T     + G   A  +   +    V++  E A   +    Y A L+ I 
Sbjct: 78  LSATQAGHLSPTAGARSEAGLKYATPSQTNLDSNTVDMDRERAAFADNAVHYEATLRFIN 137

Query: 120 QSHDMMTTTLD 130
            S   M + + 
Sbjct: 138 GSVRTMLSAIT 148


>gi|84514832|ref|ZP_01002195.1| flagellar proximal rod protein FlgF [Loktanella vestfoldensis
           SKA53]
 gi|84510991|gb|EAQ07445.1| flagellar proximal rod protein FlgF [Loktanella vestfoldensis
           SKA53]
          Length = 253

 Score = 40.2 bits (92), Expect = 0.10,   Method: Composition-based stats.
 Identities = 13/101 (12%), Positives = 36/101 (35%), Gaps = 5/101 (4%)

Query: 33  RTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKY 92
                T  + P    + + + V+  S    ++ +G          +P        G ++ 
Sbjct: 155 DAPEGTFVAGPIIATSQADDVVLSKSPDGHIRPVGQADLP-----EPDQRARLTQGFLEN 209

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            NV+ +       E+ R +  +++ I  + ++      ++R
Sbjct: 210 SNVDTIGSLIQNIESQRQFEMSVKFIALAQEIDEGGTRIMR 250


>gi|212640402|ref|YP_002316922.1| flagellar hook-associated protein FlgK [Anoxybacillus flavithermus
           WK1]
 gi|212561882|gb|ACJ34937.1| Flagellar hook-associated protein [Anoxybacillus flavithermus WK1]
          Length = 513

 Score = 40.2 bits (92), Expect = 0.10,   Method: Composition-based stats.
 Identities = 7/38 (18%), Positives = 17/38 (44%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            +V++  E  +M +    Y A+ + I     M+   ++
Sbjct: 469 SSVSLDEEMMNMMKFQHAYNASARMITMIDQMLDKIIN 506



 Score = 39.1 bits (89), Expect = 0.20,   Method: Composition-based stats.
 Identities = 18/106 (16%), Positives = 29/106 (27%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M            G+  Q   + +   NIANA T G +     + +         +    
Sbjct: 1   MLSTFHGLETVRRGMTAQQQALYVTGHNIANANTPGYSRQRVNFEQTPPYPFASKNRPVM 60

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
                 GV+  T     +    V      +KY   +   E     E
Sbjct: 61  PGQMGTGVEGGTVQRMREQFLDVQYRGENMKYGYWHTRAEALYKME 106


>gi|206889963|ref|YP_002249841.1| flagellar hook-associated protein FlgK [Thermodesulfovibrio
           yellowstonii DSM 11347]
 gi|206741901|gb|ACI20958.1| flagellar hook-associated protein FlgK [Thermodesulfovibrio
           yellowstonii DSM 11347]
          Length = 554

 Score = 40.2 bits (92), Expect = 0.11,   Method: Composition-based stats.
 Identities = 8/39 (20%), Positives = 22/39 (56%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             V++  E  ++ +  ++Y A+ + IK + +++ T  D+
Sbjct: 514 SGVSLDEEAVNLIKYQKMYEASARVIKVADEILATLFDM 552


>gi|296283218|ref|ZP_06861216.1| flagellar hook-associated protein FlgK [Citromicrobium
           bathyomarinum JL354]
          Length = 698

 Score = 40.2 bits (92), Expect = 0.11,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 18/41 (43%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             VN+  E + M      Y A  + +  +  M  T LD++R
Sbjct: 658 SGVNLDEELSQMVVLQNSYSAAARVMTTATQMYDTLLDMVR 698



 Score = 36.4 bits (82), Expect = 1.3,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 17/40 (42%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGS 41
            L      A SGL+   A ++ +S NIAN  T G     
Sbjct: 1  MSLSNILGTAVSGLSASQAGIRSVSNNIANISTPGYARER 40


>gi|294501824|ref|YP_003565524.1| flagellar hook-associated protein FlgK [Bacillus megaterium QM
          B1551]
 gi|294351761|gb|ADE72090.1| flagellar hook-associated protein FlgK [Bacillus megaterium QM
          B1551]
          Length = 507

 Score = 40.2 bits (92), Expect = 0.11,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 28/78 (35%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M        +A  G+  Q A +  I  N++NA T G T                M+ +G 
Sbjct: 1  MSSTFHGLQVAKRGMDAQQAALYTIGHNVSNANTPGYTRQRVSLETFPAYPAPGMNQTGT 60

Query: 61 VRVKKIGVDQSTFVEEFD 78
               +GV+ ST     D
Sbjct: 61 AGQIGMGVEASTVERIRD 78



 Score = 39.9 bits (91), Expect = 0.12,   Method: Composition-based stats.
 Identities = 13/95 (13%), Positives = 29/95 (30%), Gaps = 5/95 (5%)

Query: 41  SDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKY-----PNV 95
           S   ++  I+         G     IG       +            G V+        V
Sbjct: 406 SQFRQKVLINSGSQAVSLDGFYQSVIGQMSVDAQQANRLKSNSETLQGAVEQRRQSTSAV 465

Query: 96  NVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           ++  E  +M +    Y A+ + +    +M+   ++
Sbjct: 466 SLDEEMTNMIQFQHAYNASARMVTMIDEMLDKIVN 500


>gi|269138583|ref|YP_003295283.1| flagellar basal-body rod protein [Edwardsiella tarda EIB202]
 gi|267984243|gb|ACY84072.1| flagellar basal-body rod protein [Edwardsiella tarda EIB202]
 gi|304558593|gb|ADM41257.1| Flagellar basal-body rod protein FlgF [Edwardsiella tarda FL6-60]
          Length = 251

 Score = 40.2 bits (92), Expect = 0.11,   Method: Composition-based stats.
 Identities = 9/47 (19%), Positives = 18/47 (38%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
             G+++  NV  +    +M    R +   ++ I+   D       LL
Sbjct: 202 MPGVLEGSNVQPVEAMVNMITNARRFEMQMKVIRSVDDNEQKANQLL 248


>gi|317047692|ref|YP_004115340.1| flagellar basal-body rod protein FlgF [Pantoea sp. At-9b]
 gi|316949309|gb|ADU68784.1| flagellar basal-body rod protein FlgF [Pantoea sp. At-9b]
          Length = 252

 Score = 40.2 bits (92), Expect = 0.11,   Method: Composition-based stats.
 Identities = 14/102 (13%), Positives = 30/102 (29%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           N     +        +   +  + +  S     +     Q+T          V  + G++
Sbjct: 147 NPGDAPNATVQIGRLKLVKATGQELQRSDDGMFRPTAQTQATRGAALAQDVNVQVSPGVL 206

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NV  +    DM    R +   ++ I    +       LL
Sbjct: 207 EGSNVKPVETMVDMIANARRFEMQMKVISNVDENEQKANQLL 248


>gi|167585200|ref|ZP_02377588.1| flagellar hook-associated protein FlgK [Burkholderia ubonensis Bu]
          Length = 656

 Score = 40.2 bits (92), Expect = 0.11,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 21/41 (51%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +   VN   E A++ +  +LY AN + I+ +  +  T L L
Sbjct: 614 EVSGVNQNEEAANLMQYQQLYQANAKVIQTASTLFQTVLGL 654



 Score = 36.4 bits (82), Expect = 1.5,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 24/66 (36%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
           ++  SGL      +   S NIANA T G T     Y   +  +    +   GV    + 
Sbjct: 1  MNLGISGLNAAIWGLTTTSNNIANAATPGYTIERPVYAEASGQYTGSGYLPQGVNTVTVQ 60

Query: 68 VDQSTF 73
             S +
Sbjct: 61 RQYSQY 66


>gi|195953934|ref|YP_002122224.1| flagellar basal body rod protein [Hydrogenobaculum sp. Y04AAS1]
 gi|195933546|gb|ACG58246.1| flagellar basal body rod protein [Hydrogenobaculum sp. Y04AAS1]
          Length = 253

 Score = 40.2 bits (92), Expect = 0.11,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 21/40 (52%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPG 40
          M       ++  SG++++  R+ +++ NIANA T G    
Sbjct: 1  MALDYQPMYVLASGMSLEQRRLDVVANNIANADTPGFKKD 40


>gi|283780143|ref|YP_003370898.1| flagellar hook-associated protein FlgK [Pirellula staleyi DSM 6068]
 gi|283438596|gb|ADB17038.1| flagellar hook-associated protein FlgK [Pirellula staleyi DSM 6068]
          Length = 565

 Score = 39.9 bits (91), Expect = 0.11,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 20/42 (47%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +    VN+  E   M +  R + A+ + I   +D++   +++
Sbjct: 524 LAITGVNLDEEAVRMIQYQRTFQASARVISTINDLLEVLVNI 565



 Score = 39.9 bits (91), Expect = 0.11,   Method: Composition-based stats.
 Identities = 19/76 (25%), Positives = 30/76 (39%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            L+++  IAN+ L      +Q++  NIANA T G                  +    GV
Sbjct: 1  MTLLSTLQIANNSLIASQLGLQVVGNNIANANTPGYIRQQVVLTPAPTQRYGGLLLGLGV 60

Query: 62 RVKKIGVDQSTFVEEF 77
           V+ +      F+EE 
Sbjct: 61 EVQAVIQQTDRFLEER 76


>gi|1272368|gb|AAA97476.1| LfgE [Vibrio parahaemolyticus]
          Length = 362

 Score = 39.9 bits (91), Expect = 0.11,   Method: Composition-based stats.
 Identities = 15/40 (37%), Positives = 19/40 (47%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR 46
          S +IA SGL   +  +  IS NIANA T G       +  
Sbjct: 2  SFNIALSGLDATNTELNTISHNIANASTYGFKGARTEFAA 41


>gi|327441344|dbj|BAK17709.1| flagellar hook-associated protein [Solibacillus silvestris StLB046]
          Length = 562

 Score = 39.9 bits (91), Expect = 0.11,   Method: Composition-based stats.
 Identities = 8/40 (20%), Positives = 18/40 (45%), Gaps = 1/40 (2%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD-LLR 133
           V++  E  +M    + Y AN + I    + +   ++ + R
Sbjct: 520 VSLDEEMTNMITFQQAYNANARMITVIDETLDKIINGMGR 559



 Score = 34.5 bits (77), Expect = 4.8,   Method: Composition-based stats.
 Identities = 18/129 (13%), Positives = 32/129 (24%), Gaps = 6/129 (4%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG- 59
           M         +  GL  Q + +     NI+NA T G +                ++    
Sbjct: 1   MRSTFMGLEASKRGLYTQQSALYTTGHNISNANTLGYSRQRVNMETTPGFPGAGLNSGKT 60

Query: 60  ----GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
               G  V+   V +              N  G         + +  D+      +  N 
Sbjct: 61  AGHIGTGVQASSVQRIRDEFVDRQYRQETNKLGY-WQSTTQSISQMEDVMSEPTEFGINQ 119

Query: 116 QTIKQSHDM 124
              +    M
Sbjct: 120 AFTEFWKSM 128


>gi|319650827|ref|ZP_08004964.1| FlhP protein [Bacillus sp. 2_A_57_CT2]
 gi|317397425|gb|EFV78126.1| FlhP protein [Bacillus sp. 2_A_57_CT2]
          Length = 275

 Score = 39.9 bits (91), Expect = 0.11,   Method: Composition-based stats.
 Identities = 10/52 (19%), Positives = 21/52 (40%)

Query: 80  GHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
              +  A G ++  NV++  E  D+    R Y    +++  +  MM     +
Sbjct: 223 RGQIGMAQGSLEQSNVDMSKEMTDLINLQRAYQFQSRSVSMADQMMGLINGI 274


>gi|295687864|ref|YP_003591557.1| fagellar hook-basal body protein [Caulobacter segnis ATCC 21756]
 gi|295429767|gb|ADG08939.1| fagellar hook-basal body protein [Caulobacter segnis ATCC 21756]
          Length = 425

 Score = 39.9 bits (91), Expect = 0.11,   Method: Composition-based stats.
 Identities = 17/45 (37%), Positives = 22/45 (48%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR 46
            L A+   A SGL  QS  +  ISENIAN+ TT        ++ 
Sbjct: 1  MSLSAALSTAVSGLTAQSRALSAISENIANSSTTAYKTTDVYFQA 45



 Score = 34.8 bits (78), Expect = 3.8,   Method: Composition-based stats.
 Identities = 8/44 (18%), Positives = 18/44 (40%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++    ++  E   M    + Y A  Q +  + DM  + +  +R
Sbjct: 382 LEGSTTDIATEFNKMIIAQQAYSAASQVVSSASDMFDSLIQAVR 425


>gi|154250318|ref|YP_001411143.1| flagellar hook-associated protein FlgK [Fervidobacterium nodosum
           Rt17-B1]
 gi|154154254|gb|ABS61486.1| flagellar hook-associated protein FlgK [Fervidobacterium nodosum
           Rt17-B1]
          Length = 847

 Score = 39.9 bits (91), Expect = 0.11,   Method: Composition-based stats.
 Identities = 8/37 (21%), Positives = 19/37 (51%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            V++  E A+M +  + + A  + +    DM++  +D
Sbjct: 804 GVSLDEEMANMIKYQQAFNAAARVMTAVDDMISRVID 840



 Score = 37.9 bits (86), Expect = 0.48,   Method: Composition-based stats.
 Identities = 13/76 (17%), Positives = 21/76 (27%)

Query: 3  YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
           L  + +    G+      M +++ NIANA T G +                +       
Sbjct: 5  SLFGTLNTGLLGVYASKLAMNVVAHNIANANTPGFSRQRPELLTMPPIPITSLTQPAVPL 64

Query: 63 VKKIGVDQSTFVEEFD 78
              GV         D
Sbjct: 65 QIGTGVYVRDIKRVRD 80


>gi|237799210|ref|ZP_04587671.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv.
           oryzae str. 1_6]
 gi|331022065|gb|EGI02122.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv.
           oryzae str. 1_6]
          Length = 122

 Score = 39.9 bits (91), Expect = 0.11,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 23/56 (41%), Gaps = 3/56 (5%)

Query: 80  GHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS---HDMMTTTLDLL 132
              V   SG ++  NVN + E   +   +R +  +++ +K +      M   L L 
Sbjct: 67  DATVQVESGFLQASNVNAVEEMTSVLALSRQFELHVKMMKTAEEDDQSMARVLQLG 122


>gi|330447904|ref|ZP_08311552.1| flagellar basal-body rod protein FlgF [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
 gi|328492095|dbj|GAA06049.1| flagellar basal-body rod protein FlgF [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
          Length = 243

 Score = 39.9 bits (91), Expect = 0.11,   Method: Composition-based stats.
 Identities = 10/58 (17%), Positives = 24/58 (41%)

Query: 75  EEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           + F     VA  +G ++  NV+ + E   +    R +   ++ +K +  +      L+
Sbjct: 183 QVFAQDPTVAITAGHLEGSNVSAINELVSVMSLTRNFEMQVRMMKTAETLAQAGTRLM 240


>gi|167038179|ref|YP_001665757.1| flagellar hook-associated protein FlgK [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|167039112|ref|YP_001662097.1| flagellar hook-associated protein FlgK [Thermoanaerobacter sp.
           X514]
 gi|300913298|ref|ZP_07130615.1| flagellar hook-associated protein FlgK [Thermoanaerobacter sp.
           X561]
 gi|307723688|ref|YP_003903439.1| flagellar hook-associated protein FlgK [Thermoanaerobacter sp.
           X513]
 gi|320116588|ref|YP_004186747.1| flagellar hook-associated protein FlgK [Thermoanaerobacter brockii
           subsp. finnii Ako-1]
 gi|166853352|gb|ABY91761.1| flagellar hook-associated protein FlgK [Thermoanaerobacter sp.
           X514]
 gi|166857013|gb|ABY95421.1| flagellar hook-associated protein FlgK [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|300889983|gb|EFK85128.1| flagellar hook-associated protein FlgK [Thermoanaerobacter sp.
           X561]
 gi|307580749|gb|ADN54148.1| flagellar hook-associated protein FlgK [Thermoanaerobacter sp.
           X513]
 gi|319929679|gb|ADV80364.1| flagellar hook-associated protein FlgK [Thermoanaerobacter brockii
           subsp. finnii Ako-1]
          Length = 480

 Score = 39.9 bits (91), Expect = 0.11,   Method: Composition-based stats.
 Identities = 7/38 (18%), Positives = 19/38 (50%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             V++  E  +M +  + Y A+ + I    +++ T ++
Sbjct: 436 SGVSLDEEMTNMLKYQKSYAASARVITAIDELLDTLIN 473



 Score = 35.6 bits (80), Expect = 2.4,   Method: Composition-based stats.
 Identities = 14/87 (16%), Positives = 27/87 (31%), Gaps = 1/87 (1%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDP-YRRKTISFEEVMHGSGGVRV 63
               IA +GL V    + +   NIANA T G T            +   +    G    
Sbjct: 4  FQGLEIAKTGLFVSQKALDVTGHNIANANTPGYTRQVVDMASIAPPTTFGMYDQWGKAIG 63

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIV 90
          + + +     + +    +     +  +
Sbjct: 64 EGVKIQDIRQIRDQFLDNQFRRENKFL 90


>gi|238028842|ref|YP_002913073.1| flagellar hook-associated protein FlgK [Burkholderia glumae BGR1]
 gi|237878036|gb|ACR30369.1| Flagellar hook-associated protein [Burkholderia glumae BGR1]
          Length = 664

 Score = 39.9 bits (91), Expect = 0.11,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 20/39 (51%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN   E  ++ +  ++Y AN + I+ +  + +T L +
Sbjct: 624 SGVNQDEEAVNLMQYQQMYQANAKVIQTASTLFSTLLGI 662


>gi|237653586|ref|YP_002889900.1| flagellar basal-body rod protein FlgB [Thauera sp. MZ1T]
 gi|237624833|gb|ACR01523.1| flagellar basal-body rod protein FlgB [Thauera sp. MZ1T]
          Length = 134

 Score = 39.9 bits (91), Expect = 0.11,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 41/132 (31%), Gaps = 2/132 (1%)

Query: 1   MDYLIA-SAHIANSGLAVQSARMQIISENIANARTTGDTP-GSDPYRRKTISFEEVMHGS 58
           M  L         + L +Q+ R Q+I+ NIANA T        D       +      G 
Sbjct: 1   MKTLFDRQIQFHQTALNLQAHRQQLIASNIANADTPHYKARDVDFRAALQGALNASREGV 60

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
                +   +  +            +     V    VN+ VE A   E    Y A++  I
Sbjct: 61  QMATTQAGHIGSAPAPALESLTGYRSELQSAVDGNTVNMDVERAAFAENALHYEASVTFI 120

Query: 119 KQSHDMMTTTLD 130
                 M T + 
Sbjct: 121 NGMLRSMNTAIT 132


>gi|307546962|ref|YP_003899441.1| flagellar hook-associated protein FlgK [Halomonas elongata DSM
           2581]
 gi|307218986|emb|CBV44256.1| flagellar hook-associated protein FlgK [Halomonas elongata DSM
           2581]
          Length = 555

 Score = 39.9 bits (91), Expect = 0.11,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 19/40 (47%)

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
              VN+  E A++    + Y AN + I+    M+ T L L
Sbjct: 514 ASGVNLDEEAANLIRYQQYYQANAKVIEAGKTMIDTILGL 553


>gi|206558969|ref|YP_002229729.1| flagellar basal body rod protein FlgF [Burkholderia cenocepacia
           J2315]
 gi|198035006|emb|CAR50878.1| flagellar basal-body rod protein FlgF (putative proximal rod
           protein) [Burkholderia cenocepacia J2315]
          Length = 252

 Score = 39.9 bits (91), Expect = 0.11,   Method: Composition-based stats.
 Identities = 9/47 (19%), Positives = 17/47 (36%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
               ++  NVN +     M +  R +    + I+ +     T   LL
Sbjct: 203 TPNSLEGSNVNPVTAMVAMIDNARAFQLQSKLIQTADQNEQTANQLL 249


>gi|23008562|ref|ZP_00049955.1| COG4786: Flagellar basal body rod protein [Magnetospirillum
          magnetotacticum MS-1]
          Length = 126

 Score = 39.9 bits (91), Expect = 0.11,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 22/40 (55%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          + +  IA +G++ Q   +++I+ NIAN  TTG       +
Sbjct: 1  MRALAIAATGMSAQQLNLEVIANNIANLNTTGFKGARAEF 40


>gi|146311247|ref|YP_001176321.1| flagellar basal body rod protein FlgF [Enterobacter sp. 638]
 gi|145318123|gb|ABP60270.1| flagellar basal-body rod protein FlgF [Enterobacter sp. 638]
          Length = 251

 Score = 39.9 bits (91), Expect = 0.11,   Method: Composition-based stats.
 Identities = 13/102 (12%), Positives = 29/102 (28%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           N     +T       +   +    +        +      +       P   +   SG++
Sbjct: 147 NPGDPPNTVAPVGKLKLVKAEGNEVTRGDDGLFRTSASALAARGATLQPDPSIRIMSGVL 206

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NV  +    DM  + R +   ++ I    +       LL
Sbjct: 207 EGSNVKPVAAMTDMIASARRFEMQMKVITSVDENAGRANQLL 248


>gi|317121043|ref|YP_004101046.1| flagellar hook-associated protein FlgK [Thermaerobacter
          marianensis DSM 12885]
 gi|315591023|gb|ADU50319.1| flagellar hook-associated protein FlgK [Thermaerobacter
          marianensis DSM 12885]
          Length = 520

 Score = 39.9 bits (91), Expect = 0.11,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 22/78 (28%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M        +A  GL  Q   + +   NIANA T G +                +  +  
Sbjct: 1  MRSTFFGLELARLGLWAQQRALDVTGHNIANANTEGYSRQVARLSPTPAYAPPSLAMAAE 60

Query: 61 VRVKKIGVDQSTFVEEFD 78
                GV  +      D
Sbjct: 61 AGQVGTGVQVAEIQRVRD 78



 Score = 36.8 bits (83), Expect = 1.1,   Method: Composition-based stats.
 Identities = 13/113 (11%), Positives = 30/113 (26%), Gaps = 10/113 (8%)

Query: 28  NIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR--------VKKIGVDQSTFVEEFDP 79
           N+A A+  G                  ++  G           V  +G+      E    
Sbjct: 401 NLAAAQMPGAPGDGRNALAMVQLRHAPLNLPGSPSAQDYLESVVAGLGIAGRQAEEGQRT 460

Query: 80  GHPVANASGIVKYP--NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
              + +     +     V++  E   +      Y A  + +     M+   ++
Sbjct: 461 AQLLLDQVAAQRESVRGVSLDEEMTQLIRYQHAYAAAARLVTAVDTMLGILIE 513


>gi|291617021|ref|YP_003519763.1| FlgF [Pantoea ananatis LMG 20103]
 gi|291152051|gb|ADD76635.1| FlgF [Pantoea ananatis LMG 20103]
          Length = 252

 Score = 39.9 bits (91), Expect = 0.11,   Method: Composition-based stats.
 Identities = 13/102 (12%), Positives = 31/102 (30%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           NA  + +        +   +  + +        +     Q+T          +    G++
Sbjct: 147 NAGDSPNATVQLGRLKLVQATGKELQRGDDGMFRPTAATQATRGAALQADPTMQVMPGVL 206

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NV  +    DM    R +   ++ I   ++       LL
Sbjct: 207 EGSNVKPVETMVDMIANARRFEMQMKVISNVNENEQKANQLL 248


>gi|288554150|ref|YP_003426085.1| flagellar hook-associated protein FlgK [Bacillus pseudofirmus OF4]
 gi|288545310|gb|ADC49193.1| flagellar hook-associated protein FlgK [Bacillus pseudofirmus OF4]
          Length = 523

 Score = 39.9 bits (91), Expect = 0.11,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 28/102 (27%), Gaps = 3/102 (2%)

Query: 30  ANARTTGDTPGSD-PYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASG 88
           ANA    +       Y     S +       G                    + V     
Sbjct: 417 ANALELANVKDKTLNYGGTNTSVQSFYQSVIGDMAVHTNEANRMMRNADMLRNTVEERRQ 476

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            V   +V++  E  DM +    Y A  + I    +M+   ++
Sbjct: 477 SV--SSVSLDEEMTDMIKFQHAYNAAARNITMVDEMLDRIIN 516



 Score = 35.6 bits (80), Expect = 2.2,   Method: Composition-based stats.
 Identities = 11/58 (18%), Positives = 17/58 (29%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          M         A   +  Q   +     NIANA T G +     + +        M+  
Sbjct: 1  MKSTFHGLETARRAMMTQQYALHTTGHNIANANTPGYSRQRVNFTQAEPYPSIGMNRP 58


>gi|297516833|ref|ZP_06935219.1| flagellar basal body rod protein FlgC [Escherichia coli OP50]
          Length = 37

 Score = 39.9 bits (91), Expect = 0.12,   Method: Composition-based stats.
 Identities = 12/36 (33%), Positives = 18/36 (50%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGD 37
            L+    IA S L  QS R+ + + N+ANA +   
Sbjct: 1  MALLNIFDIAGSALTAQSQRLNVAASNLANADSVTG 36


>gi|262364764|gb|ACY61321.1| flagellar hook protein [Yersinia pestis D182038]
          Length = 288

 Score = 39.9 bits (91), Expect = 0.12,   Method: Composition-based stats.
 Identities = 19/65 (29%), Positives = 26/65 (40%), Gaps = 5/65 (7%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          S  IAN+ L   + ++  IS NIAN+ T G         R   S         GV V  +
Sbjct: 2  SFSIANTALNAHTEQLNTISNNIANSATKGFKA-----SRTEFSSMYAQSQPLGVAVSGV 56

Query: 67 GVDQS 71
            + S
Sbjct: 57 SQNIS 61


>gi|256750927|ref|ZP_05491811.1| flagellar hook-associated protein FlgK [Thermoanaerobacter
           ethanolicus CCSD1]
 gi|256750262|gb|EEU63282.1| flagellar hook-associated protein FlgK [Thermoanaerobacter
           ethanolicus CCSD1]
          Length = 480

 Score = 39.9 bits (91), Expect = 0.12,   Method: Composition-based stats.
 Identities = 7/38 (18%), Positives = 19/38 (50%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             V++  E  +M +  + Y A+ + I    +++ T ++
Sbjct: 436 SGVSLDEEMTNMLKYQKSYAASARVITAIDELLDTLIN 473



 Score = 35.2 bits (79), Expect = 2.7,   Method: Composition-based stats.
 Identities = 14/87 (16%), Positives = 27/87 (31%), Gaps = 1/87 (1%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDP-YRRKTISFEEVMHGSGGVRV 63
               IA +GL V    + +   NIANA T G T            +   +    G    
Sbjct: 4  FQGLEIAKTGLFVSQKALDVTGHNIANANTPGYTRQVVDMASIAPPTTFGMYDQWGKAIG 63

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIV 90
          + + +     + +    +     +  +
Sbjct: 64 EGVKIQDIRQIRDQFLDNQFRRENKFL 90


>gi|300114798|ref|YP_003761373.1| flagellar basal-body rod protein FlgF [Nitrosococcus watsonii
           C-113]
 gi|299540735|gb|ADJ29052.1| flagellar basal-body rod protein FlgF [Nitrosococcus watsonii
           C-113]
          Length = 247

 Score = 39.9 bits (91), Expect = 0.12,   Method: Composition-based stats.
 Identities = 7/44 (15%), Positives = 20/44 (45%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  N + +    +M    R Y    + ++ + ++ T +  +LR
Sbjct: 202 LEASNASGVDALVEMIALARQYEMQTKMMQTAKELDTASAQMLR 245


>gi|289607949|emb|CBI60684.1| unnamed protein product [Sordaria macrospora]
          Length = 240

 Score = 39.9 bits (91), Expect = 0.12,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 29/73 (39%), Gaps = 3/73 (4%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY---RRKTISFEEVMHGSGG 60
          +  + +I  SGL   S  +Q +S N++N  TTG    +  +             + G GG
Sbjct: 1  MFGAIYIGLSGLNAYSKGLQQVSNNVSNLNTTGFKGSTVSFHNLYATPDRGGMSLTGQGG 60

Query: 61 VRVKKIGVDQSTF 73
               + VD  T 
Sbjct: 61 SAGYGVEVDDGTL 73


>gi|168783607|ref|ZP_02808614.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
           str. EC4076]
 gi|188999091|gb|EDU68077.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
           str. EC4076]
          Length = 251

 Score = 39.9 bits (91), Expect = 0.12,   Method: Composition-based stats.
 Identities = 17/102 (16%), Positives = 32/102 (31%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           N     +T       +   +    +        +     Q+T          +   SG++
Sbjct: 147 NPGDPANTVAPVGRLKLVKATGSEVQRGDDGIFRLSAETQATRGPVLQADPTLRVMSGVL 206

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NVN +    DM  T R +   ++ I   +D       LL
Sbjct: 207 EGSNVNAVAAMTDMIATARRFEMQMKVITTVNDNPGRANQLL 248


>gi|325509555|gb|ADZ21191.1| flagellar basal body rod protein FlgG [Clostridium acetobutylicum
           EA 2018]
          Length = 258

 Score = 39.9 bits (91), Expect = 0.12,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 23/41 (56%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           ++  NVNV+    DM  T R++ +N +T++   + +   ++
Sbjct: 213 LEGSNVNVMKGMTDMMTTMRVFESNQKTVQSIDETVGKAVN 253



 Score = 34.1 bits (76), Expect = 6.2,   Method: Composition-based stats.
 Identities = 13/38 (34%), Positives = 21/38 (55%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGS 41
          ++   + A SG+ VQ A+  +I+ N+AN  T G    S
Sbjct: 1  MVRGLYTAISGMVVQEAKQDVITNNLANTNTVGFKSDS 38


>gi|260779341|ref|ZP_05888233.1| flagellar hook-associated protein FlgK [Vibrio coralliilyticus
          ATCC BAA-450]
 gi|260605505|gb|EEX31800.1| flagellar hook-associated protein FlgK [Vibrio coralliilyticus
          ATCC BAA-450]
          Length = 457

 Score = 39.9 bits (91), Expect = 0.12,   Method: Composition-based stats.
 Identities = 14/69 (20%), Positives = 26/69 (37%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          +   +IA SGL      + + ++N++N  T G +           +  + +    GV V 
Sbjct: 1  MNLVNIALSGLNANRVALDVTAQNVSNINTPGYSRQQALMASVGGTKHDKLSPGLGVEVT 60

Query: 65 KIGVDQSTF 73
           I      F
Sbjct: 61 SIRRVTDEF 69


>gi|51597636|ref|YP_071827.1| flagellar basal body rod protein FlgF [Yersinia pseudotuberculosis
           IP 32953]
 gi|186896770|ref|YP_001873882.1| flagellar basal body rod protein FlgF [Yersinia pseudotuberculosis
           PB1/+]
 gi|51590918|emb|CAH22574.1| putative flagellar basal-body rod protein FlgF [Yersinia
           pseudotuberculosis IP 32953]
 gi|186699796|gb|ACC90425.1| flagellar basal-body rod protein FlgF [Yersinia pseudotuberculosis
           PB1/+]
          Length = 243

 Score = 39.9 bits (91), Expect = 0.12,   Method: Composition-based stats.
 Identities = 9/60 (15%), Positives = 23/60 (38%)

Query: 74  VEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
                    V   +  ++  NV+ + E       +R + A ++ +K + D+      ++R
Sbjct: 182 RGPAARDETVQVVNKHLESSNVSAISEMIASISLSRQFEAQIKMMKVAEDLAQAGNRMIR 241


>gi|330880524|gb|EGH14673.1| flagellar hook protein FlgE [Pseudomonas syringae pv. glycinea str.
           race 4]
          Length = 52

 Score = 39.9 bits (91), Expect = 0.12,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 23/42 (54%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           ++  NV++ +E  ++ +    Y AN +TI     +M TT+ +
Sbjct: 10  LEESNVDLTMELVNLIKAQSNYQANAKTISTQSTIMQTTIQM 51


>gi|320664476|gb|EFX31627.1| flagellar basal body rod protein FlgF [Escherichia coli O157:H7
           str. LSU-61]
          Length = 251

 Score = 39.9 bits (91), Expect = 0.12,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 32/102 (31%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           N     +T       +   +    +        +     Q+T          +   SG++
Sbjct: 147 NPGDPANTVAPVGRLKLVKARGSEVQRGDDGIFRLSAETQATRGPVLQADPTLRVMSGVL 206

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NVN +   +DM  + R +   ++ I    D       LL
Sbjct: 207 EGSNVNAVAAMSDMIASARRFEMQMKVISSVDDNAGRANQLL 248


>gi|229591865|ref|YP_002873984.1| flagellar hook-associated protein FlgK [Pseudomonas fluorescens
          SBW25]
 gi|229363731|emb|CAY51133.1| putative flagellar hook-associated protein [Pseudomonas
          fluorescens SBW25]
          Length = 682

 Score = 39.9 bits (91), Expect = 0.12,   Method: Composition-based stats.
 Identities = 15/95 (15%), Positives = 33/95 (34%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          ++  +I  SGL      + ++S NIANA T G +           +    +    G  + 
Sbjct: 1  MSLLNIGMSGLNAAQGSLSVLSNNIANANTAGYSRQQTIQSANASNQYGGVFIGSGTTLA 60

Query: 65 KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
           +    + +++         N+        V+ + 
Sbjct: 61 DVRRVYNEYLDTAYQNSTSLNSDAKAYLDQVSAVD 95


>gi|256376483|ref|YP_003100143.1| flagellar hook-associated protein FlgK [Actinosynnema mirum DSM
           43827]
 gi|255920786|gb|ACU36297.1| flagellar hook-associated protein FlgK [Actinosynnema mirum DSM
           43827]
          Length = 459

 Score = 39.9 bits (91), Expect = 0.12,   Method: Composition-based stats.
 Identities = 9/38 (23%), Positives = 15/38 (39%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             VN+  E   M    R Y A  + +     M+ T ++
Sbjct: 418 AGVNLDEELTSMLTYQRSYEAAARVMSAVDSMLDTLIN 455



 Score = 34.1 bits (76), Expect = 7.6,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 18/41 (43%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGS 41
          M    +    A  G+      +++  +NIANART G +   
Sbjct: 1  MSSTFSGITSALGGMQAARRGLEVAGQNIANARTEGYSRQR 41


>gi|197336362|ref|YP_002156694.1| flagellar hook-associated protein FlgK [Vibrio fischeri MJ11]
 gi|197317852|gb|ACH67299.1| flagellar hook-associated protein FlgK [Vibrio fischeri MJ11]
          Length = 626

 Score = 39.9 bits (91), Expect = 0.12,   Method: Composition-based stats.
 Identities = 17/118 (14%), Positives = 30/118 (25%), Gaps = 1/118 (0%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFV 74
           L  Q   +   S NI N  T G +  S         +    +   GV V  +      F 
Sbjct: 14  LTAQRQ-LNTTSHNINNVNTEGFSRQSVVQDTNMPHWVSGANFGAGVHVAAVRRSFDQFA 72

Query: 75  EEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
                         +    N++VL          R+             +  +  ++ 
Sbjct: 73  TNELNLSTTNLNYSMDTEANLDVLTNMMSSIGAKRIPENINDWFDAVKTLADSPNEIG 130



 Score = 35.2 bits (79), Expect = 3.3,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 21/39 (53%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN+  E A+M +  + YMA+ + +K + +   + L L
Sbjct: 587 SGVNLDEEAANMMKFQQAYMASSRIMKAADETFNSILQL 625


>gi|306817677|ref|ZP_07451419.1| possible flagellar hook-associated protein FlgK [Mobiluncus
           mulieris ATCC 35239]
 gi|304649491|gb|EFM46774.1| possible flagellar hook-associated protein FlgK [Mobiluncus
           mulieris ATCC 35239]
          Length = 916

 Score = 39.9 bits (91), Expect = 0.12,   Method: Composition-based stats.
 Identities = 7/41 (17%), Positives = 17/41 (41%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            +V++  E  ++      Y    +     + M+ T ++L R
Sbjct: 876 SSVDMNEEVMNLIRGQHAYAGAARITSTVNSMLETLINLGR 916


>gi|22127326|ref|NP_670749.1| flagellar basal body rod protein FlgF [Yersinia pestis KIM 10]
 gi|45442797|ref|NP_994336.1| flagellar basal body rod protein FlgF [Yersinia pestis biovar
           Microtus str. 91001]
 gi|108809054|ref|YP_652970.1| flagellar basal body rod protein FlgF [Yersinia pestis Antiqua]
 gi|108810749|ref|YP_646516.1| flagellar basal body rod protein FlgF [Yersinia pestis Nepal516]
 gi|145597818|ref|YP_001161894.1| flagellar basal body rod protein FlgF [Yersinia pestis Pestoides F]
 gi|166212093|ref|ZP_02238128.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|167399157|ref|ZP_02304681.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167425211|ref|ZP_02316964.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|229837409|ref|ZP_04457572.1| Flagellar basal-body rod protein flgF [Yersinia pestis Pestoides A]
 gi|229900946|ref|ZP_04516070.1| Flagellar basal-body rod protein flgF [Yersinia pestis Nepal516]
 gi|21960407|gb|AAM87000.1|AE013948_8 putative flagellar rod protein [Yersinia pestis KIM 10]
 gi|45437663|gb|AAS63213.1| putative flagellar rod protein [Yersinia pestis biovar Microtus
           str. 91001]
 gi|108774397|gb|ABG16916.1| hypothetical protein YPN_0584 [Yersinia pestis Nepal516]
 gi|108780967|gb|ABG15025.1| hypothetical protein YPA_3063 [Yersinia pestis Antiqua]
 gi|145209514|gb|ABP38921.1| hypothetical protein YPDSF_0510 [Yersinia pestis Pestoides F]
 gi|166206839|gb|EDR51319.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|167051661|gb|EDR63069.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167055974|gb|EDR65755.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|229682285|gb|EEO78377.1| Flagellar basal-body rod protein flgF [Yersinia pestis Nepal516]
 gi|229705532|gb|EEO91542.1| Flagellar basal-body rod protein flgF [Yersinia pestis Pestoides A]
 gi|320016710|gb|ADW00282.1| Flagellar basal-body rod protein flgF [Yersinia pestis biovar
           Medievalis str. Harbin 35]
          Length = 243

 Score = 39.9 bits (91), Expect = 0.12,   Method: Composition-based stats.
 Identities = 9/60 (15%), Positives = 23/60 (38%)

Query: 74  VEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
                    V   +  ++  NV+ + E       +R + A ++ +K + D+      ++R
Sbjct: 182 RGPAARDETVQVVNKHLESSNVSAISEMIASISLSRQFEAQIKMMKVAEDLAQAGNRMIR 241


>gi|295707173|ref|YP_003600248.1| flagellar hook-associated protein FlgK [Bacillus megaterium DSM
          319]
 gi|294804832|gb|ADF41898.1| flagellar hook-associated protein FlgK [Bacillus megaterium DSM
          319]
          Length = 507

 Score = 39.9 bits (91), Expect = 0.12,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 28/78 (35%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M        +A  G+  Q A +  I  N++NA T G T                M+ +G 
Sbjct: 1  MSSTFHGLQVAKRGMDAQQAALYTIGHNVSNANTPGYTRQRVSLETFPAYPAPGMNQTGT 60

Query: 61 VRVKKIGVDQSTFVEEFD 78
               +GV+ ST     D
Sbjct: 61 AGQIGMGVEASTVERIRD 78



 Score = 39.5 bits (90), Expect = 0.14,   Method: Composition-based stats.
 Identities = 6/38 (15%), Positives = 17/38 (44%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             V++  E  +M +    Y A+ + +    +M+   ++
Sbjct: 463 SAVSLDEEMTNMIQFQHAYNASARMVTMIDEMLDKIVN 500


>gi|322421655|ref|YP_004200878.1| flagellar hook-associated protein FlgK [Geobacter sp. M18]
 gi|320128042|gb|ADW15602.1| flagellar hook-associated protein FlgK [Geobacter sp. M18]
          Length = 481

 Score = 39.9 bits (91), Expect = 0.12,   Method: Composition-based stats.
 Identities = 16/112 (14%), Positives = 35/112 (31%), Gaps = 5/112 (4%)

Query: 24  IISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPV 83
             S N  NA    +   +        +            V ++GVD              
Sbjct: 373 TSSGNNENALKIANLGSTSFAF---STGSATFGNFYSSLVSQVGVDTEGTQNVTTQNAAF 429

Query: 84  ANASGIVKYPN--VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
                 ++  N  V++  E  ++    R +  + + +  + DM+   L ++R
Sbjct: 430 LKQLNALRASNSEVSLDEELLNLTRYQRAFQGSAKVVNAATDMLDIVLGMVR 481



 Score = 37.2 bits (84), Expect = 0.87,   Method: Composition-based stats.
 Identities = 14/98 (14%), Positives = 31/98 (31%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            +     IA+SG+      +++  ENI+N  T G +        K +S         GV
Sbjct: 1  MGINTIFDIASSGITANRLAIEVTGENISNVNTEGYSRQRVVMENKPVSTANGFALGTGV 60

Query: 62 RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
           +  +       ++             + +   +  + 
Sbjct: 61 EIAAVQRSYDNMLQLQLVNANSTYQESLAQQSALEQIE 98


>gi|239817151|ref|YP_002946061.1| flagellar hook-associated protein FlgK [Variovorax paradoxus S110]
 gi|239803728|gb|ACS20795.1| flagellar hook-associated protein FlgK [Variovorax paradoxus S110]
          Length = 652

 Score = 39.9 bits (91), Expect = 0.12,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 19/39 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN   ETA++    ++Y AN + I+ +  M    L +
Sbjct: 612 SGVNQDEETANLLMYQQMYQANAKVIQTASTMFDAILGI 650


>gi|333008278|gb|EGK27752.1| flagellar hook protein flgE [Shigella flexneri K-272]
 gi|333019768|gb|EGK39040.1| flagellar hook protein flgE [Shigella flexneri K-227]
          Length = 390

 Score = 39.9 bits (91), Expect = 0.12,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 20/40 (50%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           +     +G ++  NV++  E  +M    R Y +N QTIK 
Sbjct: 351 NFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKT 390



 Score = 34.5 bits (77), Expect = 4.7,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 4/63 (6%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          +   A SGL   +  + +I  NIAN+ T G   G+  +               GV+V  I
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFA----DMFAGSKVGLGVKVAGI 57

Query: 67 GVD 69
            D
Sbjct: 58 TQD 60


>gi|115522802|ref|YP_779713.1| flagellar hook protein FlgE [Rhodopseudomonas palustris BisA53]
 gi|115516749|gb|ABJ04733.1| flagellar basal body FlaE domain protein [Rhodopseudomonas
           palustris BisA53]
          Length = 421

 Score = 39.9 bits (91), Expect = 0.12,   Method: Composition-based stats.
 Identities = 12/86 (13%), Positives = 28/86 (32%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
           T +  + +               +  V++           G ++    +   E ++M   
Sbjct: 336 TFAAPDQLQVKSNGLYAATADSGTAIVQQSGSNGAGTIQGGKLEASTADTNTEFSNMISA 395

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
            + Y A  Q I   ++M  T +  +R
Sbjct: 396 QQAYSAASQVITAVNEMFDTLISAVR 421


>gi|328543140|ref|YP_004303249.1| flagellar hook-associated protein FlgK [polymorphum gilvum
           SL003B-26A1]
 gi|326412886|gb|ADZ69949.1| Flagellar hook-associated protein FlgK [Polymorphum gilvum
           SL003B-26A1]
          Length = 617

 Score = 39.9 bits (91), Expect = 0.13,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 19/42 (45%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             +   V+V  E A + E    Y AN + ++ + +M    L+
Sbjct: 574 YEESYAVDVDAELAFLIELQNAYAANARVMQAAKEMFDVLLN 615


>gi|307699881|ref|ZP_07636932.1| putative flagellar hook-associated protein FlgK [Mobiluncus
           mulieris FB024-16]
 gi|307614919|gb|EFN94137.1| putative flagellar hook-associated protein FlgK [Mobiluncus
           mulieris FB024-16]
          Length = 976

 Score = 39.9 bits (91), Expect = 0.13,   Method: Composition-based stats.
 Identities = 7/41 (17%), Positives = 17/41 (41%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            +V++  E  ++      Y    +     + M+ T ++L R
Sbjct: 936 SSVDMNEEVMNLIRGQHAYAGAARITSTVNSMLETLINLGR 976


>gi|331672597|ref|ZP_08373386.1| flagellar basal-body rod protein FlgF [Escherichia coli TA280]
 gi|331070240|gb|EGI41606.1| flagellar basal-body rod protein FlgF [Escherichia coli TA280]
          Length = 251

 Score = 39.9 bits (91), Expect = 0.13,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 32/102 (31%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           N     +T       +   +    +        +     Q+T          +   SG++
Sbjct: 147 NPGDPANTVAPVGRLKLVKATGSEVQRGDDGIFRLSAESQATRGPVLQADPTLRVMSGVL 206

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NVN +   +DM  + R +   ++ I    D       LL
Sbjct: 207 EGSNVNAVAAMSDMIASARRFEMQMKVISSVDDNAGRANQLL 248


>gi|258592561|emb|CBE68870.1| Flagellar basal body and hook proteins [NC10 bacterium 'Dutch
           sediment']
          Length = 245

 Score = 39.9 bits (91), Expect = 0.13,   Method: Composition-based stats.
 Identities = 10/63 (15%), Positives = 19/63 (30%), Gaps = 1/63 (1%)

Query: 72  TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD-MMTTTLD 130
               E      V    G ++  NV+ +     +  + R   A  + I      +     +
Sbjct: 182 PSAPEPPVAKTVEIRQGFLEGSNVDAVTAMTQIMVSLRASEAYQKAIHALDQSLNQAASE 241

Query: 131 LLR 133
           L R
Sbjct: 242 LGR 244



 Score = 37.9 bits (86), Expect = 0.52,   Method: Composition-based stats.
 Identities = 13/37 (35%), Positives = 22/37 (59%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPG 40
          +++  + A SGL  Q A+M+ +S+N+AN  T G    
Sbjct: 1  MVSGLYTAASGLMAQMAKMEALSQNLANTGTPGFKGD 37


>gi|261821154|ref|YP_003259260.1| flagellar basal body rod protein FlgF [Pectobacterium wasabiae
           WPP163]
 gi|261605167|gb|ACX87653.1| flagellar basal-body rod protein FlgF [Pectobacterium wasabiae
           WPP163]
          Length = 251

 Score = 39.9 bits (91), Expect = 0.13,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 30/102 (29%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           NA    +T       +   +  + +  S     +     Q            V    G++
Sbjct: 147 NAGDPPNTIAQLGRLKLVKATGQEVERSDDGLFRLTQQAQQQRGNVLQNDPTVRIMPGVI 206

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NVN +    DM    R +   ++ I    D       +L
Sbjct: 207 EGSNVNTVDTMVDMIANARRFEMQMKVISSVDDNAQRANQIL 248


>gi|331646335|ref|ZP_08347438.1| flagellar basal-body rod protein FlgF [Escherichia coli M605]
 gi|222032830|emb|CAP75569.1| flagellar basal-body rod protein flgF [Escherichia coli LF82]
 gi|281178186|dbj|BAI54516.1| flagellar basal-body rod protein FlgF [Escherichia coli SE15]
 gi|312945639|gb|ADR26466.1| flagellar basal body rod protein FlgF [Escherichia coli O83:H1 str.
           NRG 857C]
 gi|330910891|gb|EGH39401.1| flagellar basal-body rod protein FlgF [Escherichia coli AA86]
 gi|331045087|gb|EGI17214.1| flagellar basal-body rod protein FlgF [Escherichia coli M605]
          Length = 251

 Score = 39.9 bits (91), Expect = 0.13,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 32/102 (31%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           N     +T       +   +    +        +     Q+T          +   SG++
Sbjct: 147 NPGDPANTVAPVGRLKLVKATGSEVQRGDDGIFRLSAESQATRGPVLQADPTLRVMSGVL 206

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NVN +   +DM  + R +   ++ I    D       LL
Sbjct: 207 EGSNVNAVAAMSDMIASARRFEMQMKVISSVDDNAGRANQLL 248


>gi|15801194|ref|NP_287211.1| flagellar basal body rod protein FlgF [Escherichia coli O157:H7
           EDL933]
 gi|15830709|ref|NP_309482.1| flagellar basal body rod protein FlgF [Escherichia coli O157:H7
           str. Sakai]
 gi|168747147|ref|ZP_02772169.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
           str. EC4113]
 gi|168758630|ref|ZP_02783637.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
           str. EC4401]
 gi|168764489|ref|ZP_02789496.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
           str. EC4501]
 gi|168767736|ref|ZP_02792743.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
           str. EC4486]
 gi|168773922|ref|ZP_02798929.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
           str. EC4196]
 gi|168790012|ref|ZP_02815019.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
           str. EC869]
 gi|168802022|ref|ZP_02827029.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
           str. EC508]
 gi|195935467|ref|ZP_03080849.1| flagellar basal body rod protein FlgF [Escherichia coli O157:H7
           str. EC4024]
 gi|208805942|ref|ZP_03248279.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
           str. EC4206]
 gi|208815658|ref|ZP_03256837.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
           str. EC4045]
 gi|208822437|ref|ZP_03262756.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
           str. EC4042]
 gi|209397223|ref|YP_002269923.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
           str. EC4115]
 gi|217328081|ref|ZP_03444163.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
           str. TW14588]
 gi|254792459|ref|YP_003077296.1| flagellar basal body rod protein FlgF [Escherichia coli O157:H7
           str. TW14359]
 gi|261227018|ref|ZP_05941299.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli O157:H7 str. FRIK2000]
 gi|261256252|ref|ZP_05948785.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli O157:H7 str. FRIK966]
 gi|291282097|ref|YP_003498915.1| Flagellar basal-body rod protein FlgF [Escherichia coli O55:H7 str.
           CB9615]
 gi|12514615|gb|AAG55823.1|AE005317_12 flagellar biosynthesis, cell-proximal portion of basal-body rod
           [Escherichia coli O157:H7 str. EDL933]
 gi|13360919|dbj|BAB34878.1| flagellar rod protein flgF [Escherichia coli O157:H7 str. Sakai]
 gi|187770508|gb|EDU34352.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
           str. EC4196]
 gi|188018201|gb|EDU56323.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
           str. EC4113]
 gi|189354581|gb|EDU73000.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
           str. EC4401]
 gi|189363129|gb|EDU81548.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
           str. EC4486]
 gi|189365533|gb|EDU83949.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
           str. EC4501]
 gi|189370455|gb|EDU88871.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
           str. EC869]
 gi|189375940|gb|EDU94356.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
           str. EC508]
 gi|208725743|gb|EDZ75344.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
           str. EC4206]
 gi|208732306|gb|EDZ80994.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
           str. EC4045]
 gi|208737922|gb|EDZ85605.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
           str. EC4042]
 gi|209158623|gb|ACI36056.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
           str. EC4115]
 gi|209773368|gb|ACI84996.1| flagellar rod protein flgF [Escherichia coli]
 gi|209773370|gb|ACI84997.1| flagellar rod protein flgF [Escherichia coli]
 gi|209773372|gb|ACI84998.1| flagellar rod protein flgF [Escherichia coli]
 gi|209773374|gb|ACI84999.1| flagellar rod protein flgF [Escherichia coli]
 gi|209773376|gb|ACI85000.1| flagellar rod protein flgF [Escherichia coli]
 gi|217318508|gb|EEC26934.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
           str. TW14588]
 gi|254591859|gb|ACT71220.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli O157:H7 str. TW14359]
 gi|290761970|gb|ADD55931.1| Flagellar basal-body rod protein FlgF [Escherichia coli O55:H7 str.
           CB9615]
 gi|320189760|gb|EFW64416.1| Flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
           str. EC1212]
 gi|320637528|gb|EFX07328.1| flagellar basal body rod protein FlgF [Escherichia coli O157:H7
           str. G5101]
 gi|320643089|gb|EFX12290.1| flagellar basal body rod protein FlgF [Escherichia coli O157:H-
           str. 493-89]
 gi|320648547|gb|EFX17202.1| flagellar basal body rod protein FlgF [Escherichia coli O157:H-
           str. H 2687]
 gi|320653861|gb|EFX21935.1| flagellar basal body rod protein FlgF [Escherichia coli O55:H7 str.
           3256-97 TW 07815]
 gi|320659341|gb|EFX26910.1| flagellar basal body rod protein FlgF [Escherichia coli O55:H7 str.
           USDA 5905]
 gi|326339299|gb|EGD63113.1| Flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
           str. 1125]
 gi|326344740|gb|EGD68488.1| Flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
           str. 1044]
          Length = 251

 Score = 39.9 bits (91), Expect = 0.13,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 32/102 (31%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           N     +T       +   +    +        +     Q+T          +   SG++
Sbjct: 147 NPGDPANTVAPVGRLKLVKATGSEVQRGDDGIFRLSAETQATRGPVLQADPTLRVMSGVL 206

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NVN +   +DM  + R +   ++ I    D       LL
Sbjct: 207 EGSNVNAVAAMSDMIASARRFEMQMKVISSVDDNAGRANQLL 248


>gi|332525065|ref|ZP_08401245.1| flagellar basal-body rod protein FlgF [Rubrivivax benzoatilyticus
           JA2]
 gi|332108354|gb|EGJ09578.1| flagellar basal-body rod protein FlgF [Rubrivivax benzoatilyticus
           JA2]
          Length = 240

 Score = 39.9 bits (91), Expect = 0.13,   Method: Composition-based stats.
 Identities = 14/111 (12%), Positives = 34/111 (30%), Gaps = 8/111 (7%)

Query: 22  MQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGH 81
           + I ++   +A   G  P +    +       +  G+ G+     G   +          
Sbjct: 136 LTIGADGTVSAAANGGKPQAIGRLKLVTPEAPLTRGTDGLFRAADGDLPADPAARL---- 191

Query: 82  PVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
                 G ++  NV+ +     M    R +   ++ ++ +         LL
Sbjct: 192 ----QDGALEGSNVSPVETMVQMISAARQFEQQIKMLQTAEQKEQGATKLL 238


>gi|312115252|ref|YP_004012848.1| flagellar basal body rod protein [Rhodomicrobium vannielii ATCC
           17100]
 gi|311220381|gb|ADP71749.1| flagellar basal body rod protein [Rhodomicrobium vannielii ATCC
           17100]
          Length = 124

 Score = 39.9 bits (91), Expect = 0.13,   Method: Composition-based stats.
 Identities = 23/129 (17%), Positives = 42/129 (32%), Gaps = 12/129 (9%)

Query: 4   LIASAHIANSGLAVQSARM----QIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
           +     IA    ++Q   +    +++++N+ANA T G    +       +    +   S 
Sbjct: 1   MTNVLDIA----SLQGRWLFAKERVLAQNVANANTPGYKAANIVPFEAVMHDIRLQMTST 56

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
                +  V Q             A         +VN+  E     E  R Y  N   +K
Sbjct: 57  SPMHLRAEVSQ----ISSTAQEDAAGGETFYSGGDVNLDQEMLKSSEVMRDYALNASVVK 112

Query: 120 QSHDMMTTT 128
             H M++  
Sbjct: 113 TFHSMISQA 121


>gi|212634354|ref|YP_002310879.1| flagellar basal body rod protein [Shewanella piezotolerans WP3]
 gi|212555838|gb|ACJ28292.1| Flagellar basal body rod protein [Shewanella piezotolerans WP3]
          Length = 640

 Score = 39.9 bits (91), Expect = 0.13,   Method: Composition-based stats.
 Identities = 17/101 (16%), Positives = 30/101 (29%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           +    IA +G+    +++ I S NIANA T G                       G  V 
Sbjct: 3   MDLLSIARTGVLASQSQLAITSNNIANANTDGYNRQVASQSALDSQRMGNEFYGAGTYVS 62

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
            +    + +          A +     Y  ++ L +     
Sbjct: 63  DVKRVYNDYAARELRIGATAASEAQTSYSKMSELDQLFSQI 103



 Score = 34.1 bits (76), Expect = 7.3,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 19/41 (46%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             VN+  E A++    + Y A+ + +  + ++  T    LR
Sbjct: 600 SGVNLDEEAANLMRFQQSYQASARIMTTATEIFNTLFSSLR 640


>gi|167628881|ref|YP_001679380.1| flagellar hook-associated protein flgk, putative [Heliobacterium
           modesticaldum Ice1]
 gi|167591621|gb|ABZ83369.1| flagellar hook-associated protein flgk, putative [Heliobacterium
           modesticaldum Ice1]
          Length = 736

 Score = 39.9 bits (91), Expect = 0.13,   Method: Composition-based stats.
 Identities = 11/89 (12%), Positives = 28/89 (31%), Gaps = 2/89 (2%)

Query: 43  PYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP--NVNVLVE 100
             + +               V  +GV         D    + +     +    +V++  E
Sbjct: 640 YEKIRDFLNPMTYDDFYRNVVGDLGVAGQEAKRMHDNQTVLTDTIDKQRQSISSVSLDEE 699

Query: 101 TADMRETNRLYMANLQTIKQSHDMMTTTL 129
             +M    + Y A+ + +    +M+ T +
Sbjct: 700 MTNMIRYQQAYNASARMVNVMDEMLDTII 728



 Score = 37.5 bits (85), Expect = 0.56,   Method: Composition-based stats.
 Identities = 19/75 (25%), Positives = 24/75 (32%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M        IA  G+      + +   NI N  T G +  +         FE  MHG  G
Sbjct: 1  MVSTFFGLEIAKRGINANRIGLDVTGHNITNVNTEGYSRQTIVSVTTASLFEPSMHGVYG 60

Query: 61 VRVKKIGVDQSTFVE 75
                GVD S    
Sbjct: 61 AGQIGTGVDVSEIRR 75


>gi|162421354|ref|YP_001604846.1| flagellar basal body rod protein FlgF [Yersinia pestis Angola]
 gi|162354169|gb|ABX88117.1| flagellar basal-body rod protein FlgF [Yersinia pestis Angola]
          Length = 243

 Score = 39.9 bits (91), Expect = 0.13,   Method: Composition-based stats.
 Identities = 9/60 (15%), Positives = 23/60 (38%)

Query: 74  VEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
                    V   +  ++  NV+ + E       +R + A ++ +K + D+      ++R
Sbjct: 182 RGPAARDETVQVVNKHLESSNVSAISEMIASISLSRQFEAQIKMMKVAEDLAQAGNRMIR 241


>gi|229827759|ref|ZP_04453828.1| hypothetical protein GCWU000182_03151 [Abiotrophia defectiva ATCC
          49176]
 gi|229787958|gb|EEP24072.1| hypothetical protein GCWU000182_03151 [Abiotrophia defectiva ATCC
          49176]
          Length = 633

 Score = 39.9 bits (91), Expect = 0.13,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 24/71 (33%), Gaps = 4/71 (5%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGS----DPYRRKTISFEEVMHG 57
            L+ S  +  SGL      +   + NI NA T G         D    KT +   +   
Sbjct: 1  MGLMTSFGVGVSGLNAAQNSLNATAHNITNADTKGYVRQQVLTVDKEYAKTATVRGMDQT 60

Query: 58 SGGVRVKKIGV 68
            G  + KI  
Sbjct: 61 GHGTIIDKIRQ 71


>gi|117928040|ref|YP_872591.1| flagellar hook-associated protein FlgK [Acidothermus
          cellulolyticus 11B]
 gi|117648503|gb|ABK52605.1| flagellar hook-associated protein FlgK [Acidothermus
          cellulolyticus 11B]
          Length = 463

 Score = 39.9 bits (91), Expect = 0.13,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 27/70 (38%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M     S   A + L  +   +++  +NIANA T+G T     ++    S    M+    
Sbjct: 1  MGTEFGSLSTALTALQAERKALEVTGQNIANASTSGYTRQRAVFQGIGGSVVPAMYSRSD 60

Query: 61 VRVKKIGVDQ 70
               + V +
Sbjct: 61 GVGAGVVVSE 70


>gi|320107049|ref|YP_004182639.1| flagellar hook-associated protein FlgK [Terriglobus saanensis
           SP1PR4]
 gi|319925570|gb|ADV82645.1| flagellar hook-associated protein FlgK [Terriglobus saanensis
           SP1PR4]
          Length = 467

 Score = 39.9 bits (91), Expect = 0.13,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 18/42 (42%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
               V++  E +++ E  R Y A  +      +M  + ++L 
Sbjct: 420 ALSGVSLDEEASNLTEYQRSYQAAAKVFSIVDEMFASAINLG 461


>gi|311070047|ref|YP_003974970.1| flagellar hook-associated protein FlgK [Bacillus atrophaeus 1942]
 gi|310870564|gb|ADP34039.1| flagellar hook-associated protein FlgK [Bacillus atrophaeus 1942]
          Length = 507

 Score = 39.9 bits (91), Expect = 0.13,   Method: Composition-based stats.
 Identities = 8/66 (12%), Positives = 22/66 (33%)

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
            I   ++  +         A      +   V++  E  +M +    Y A  + +    +M
Sbjct: 435 GIKTQEANRLAANTETQLNAADLNRQQMSAVSLDEEMTNMIQFQHAYNAAARMVTLQDEM 494

Query: 125 MTTTLD 130
           +   ++
Sbjct: 495 LDKVIN 500



 Score = 38.3 bits (87), Expect = 0.39,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 16/41 (39%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGS 41
          M         A   L+ Q A +   + N+ANA T G T   
Sbjct: 1  MSSTFMGLETARRALSAQQAALSTTANNVANANTDGYTRQR 41


>gi|149183417|ref|ZP_01861850.1| FlhP [Bacillus sp. SG-1]
 gi|148848862|gb|EDL63079.1| FlhP [Bacillus sp. SG-1]
          Length = 278

 Score = 39.9 bits (91), Expect = 0.13,   Method: Composition-based stats.
 Identities = 12/84 (14%), Positives = 29/84 (34%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
               + ++     ++   +  ++     E      +  A   ++  NV++  E  DM   
Sbjct: 194 QQVGQNLLGLPDDLQGFGVNENEILTSLEGALRDNIGLAQSTLEGSNVDIGKEMTDMLNV 253

Query: 108 NRLYMANLQTIKQSHDMMTTTLDL 131
            R Y    ++I  +  MM     +
Sbjct: 254 QRAYQFQSRSISMADQMMGLINGI 277


>gi|323703166|ref|ZP_08114819.1| flagellar basal-body rod protein FlgB [Desulfotomaculum nigrificans
           DSM 574]
 gi|323531825|gb|EGB21711.1| flagellar basal-body rod protein FlgB [Desulfotomaculum nigrificans
           DSM 574]
          Length = 132

 Score = 39.9 bits (91), Expect = 0.13,   Method: Composition-based stats.
 Identities = 20/112 (17%), Positives = 32/112 (28%), Gaps = 7/112 (6%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPG-SDPYRRKTISFEEVMHGSGG 60
             +         GL   + R ++I+ N+AN  T G          +   + E       G
Sbjct: 6   SPMFNLLQ---RGLDASALRQRVIANNVANLNTPGFKKSYVSFEEQLKAAMESGGGPLKG 62

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
                IGV       E                 NV++  E  ++  T   Y 
Sbjct: 63  THPLHIGVSNMDVKPEVKQVKDTTMR---YDGNNVDIDEEMVNLAATTIEYD 111


>gi|300024587|ref|YP_003757198.1| flagellar hook-associated protein FlgK [Hyphomicrobium
           denitrificans ATCC 51888]
 gi|299526408|gb|ADJ24877.1| flagellar hook-associated protein FlgK [Hyphomicrobium
           denitrificans ATCC 51888]
          Length = 487

 Score = 39.9 bits (91), Expect = 0.13,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 50/151 (33%), Gaps = 21/151 (13%)

Query: 1   MDYLIASAHIANS-----GLAVQSARMQIISE-----NIANARTTGD---------TPGS 41
           M  L +S  I  S     G   +  R   IS      N ANA    D           G 
Sbjct: 334 MAGLASSIKINASVDPGQGGNAELIRDGGISGASYKYNSANAPAFTDRIQSLISSLNTGQ 393

Query: 42  DPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANA--SGIVKYPNVNVLV 99
                  +     +       V  +   + +   E D    VA    + + +   VN+  
Sbjct: 394 TFDASTQLPASSSVMDYAKNSVSWLEALRQSATAEADYRSTVAQRATTSLSQATGVNLDE 453

Query: 100 ETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           E  ++ +  R + A+ + I   ++M++T + 
Sbjct: 454 EMTNLLDLERTFQASSRLINTVNEMLSTLIQ 484


>gi|218557959|ref|YP_002390872.1| flagellar basal body rod protein FlgF [Escherichia coli S88]
 gi|218364728|emb|CAR02418.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli S88]
          Length = 251

 Score = 39.9 bits (91), Expect = 0.13,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 32/102 (31%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           N     +T       +   +    +        +     Q+T          +   SG++
Sbjct: 147 NPGDPANTVAPVGRLKLVKATGSEVQRGDDGIFRLSAESQATRGPVLQADPTLRVMSGVL 206

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NVN +   +DM  + R +   ++ I    D       LL
Sbjct: 207 EGSNVNAVAAMSDMIASARCFEMQMKVISSVDDNAGRANQLL 248


>gi|304316911|ref|YP_003852056.1| flagellar basal-body rod protein FlgB [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302778413|gb|ADL68972.1| flagellar basal-body rod protein FlgB [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 136

 Score = 39.9 bits (91), Expect = 0.13,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 43/110 (39%), Gaps = 1/110 (0%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
             +  + +  L     R ++IS NIAN  T G       +             +G V  K
Sbjct: 6   FNTVDLMSKALDASELRDEVISNNIANVDTPGFKRSDVNFESILNDAINSNKLAGFVTDK 65

Query: 65  KIGVDQSTFVEEFDPGHPVANASGI-VKYPNVNVLVETADMRETNRLYMA 113
                 ST ++  +P     N++ + +   NV++ VE +++ +    Y A
Sbjct: 66  NHIPINSTSIDNIEPQIVQDNSTSMRLDGNNVDIDVEMSNLAKNQLYYSA 115


>gi|316932791|ref|YP_004107773.1| flagellar hook-associated protein FlgK [Rhodopseudomonas palustris
           DX-1]
 gi|315600505|gb|ADU43040.1| flagellar hook-associated protein FlgK [Rhodopseudomonas palustris
           DX-1]
          Length = 623

 Score = 39.9 bits (91), Expect = 0.13,   Method: Composition-based stats.
 Identities = 19/159 (11%), Positives = 40/159 (25%), Gaps = 30/159 (18%)

Query: 2   DYLIASAHIANSGLAVQSARMQIIS------ENIANARTTGDTPGSDPYRRKTISFEEVM 55
                S ++A + +   + R+ + +        +    T+  T   D  R   +  + + 
Sbjct: 463 SPYSGSINVAGNQMTGYAQRISVNADLVKDNSKLVVYSTSPATAAGDTARPDFMIKQMMN 522

Query: 56  HGSGGVRVKKIGVDQSTFVEEFDPGHPV------------------------ANASGIVK 91
                     IG D + F                                          
Sbjct: 523 SKYYYSAATGIGSDTAPFKGSLQSYLQQFVSQQGSNAAAAKQLSEGQNVVLNTLQQKFSA 582

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
              VN+  E A +      Y AN + +   + M  + + 
Sbjct: 583 SSGVNMDEEMAHLLSLQNAYAANARVMSTINQMYQSLMQ 621


>gi|186895115|ref|YP_001872227.1| flagellar basal body rod protein FlgF [Yersinia pseudotuberculosis
           PB1/+]
 gi|186698141|gb|ACC88770.1| flagellar basal-body rod protein FlgF [Yersinia pseudotuberculosis
           PB1/+]
          Length = 251

 Score = 39.9 bits (91), Expect = 0.13,   Method: Composition-based stats.
 Identities = 14/102 (13%), Positives = 30/102 (29%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           NA  + +        ++  +    M              Q     +      V    G++
Sbjct: 147 NAGDSPNAIAQLGQIKRVQATAGEMMHGDDGLFHLTPETQQARGAQLPNDPLVKIMPGVL 206

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NV  +    DM    R +   ++ I+   +   +   LL
Sbjct: 207 EGSNVKAVEAMTDMIANARSFEMQMKVIQSVDENEQSANQLL 248


>gi|167585195|ref|ZP_02377583.1| flagellar basal-body rod protein FlgF [Burkholderia ubonensis Bu]
          Length = 252

 Score = 39.9 bits (91), Expect = 0.13,   Method: Composition-based stats.
 Identities = 8/46 (17%), Positives = 17/46 (36%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
              ++  NVN +     M +  R +    + I+ +     +   LL
Sbjct: 204 PNSLEGSNVNPVNAMVAMIDNARAFQLQSKMIQTADQNEQSANQLL 249


>gi|157147101|ref|YP_001454420.1| flagellar basal body rod protein FlgF [Citrobacter koseri ATCC
           BAA-895]
 gi|157084306|gb|ABV13984.1| hypothetical protein CKO_02878 [Citrobacter koseri ATCC BAA-895]
          Length = 243

 Score = 39.9 bits (91), Expect = 0.13,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 26/58 (44%)

Query: 76  EFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
                  V  ASG ++  NV+ + E       NR + A ++ +K + D+  +   L+R
Sbjct: 184 INPRDEEVMVASGHLETANVSAINEMVASIALNRQFEAQIKMMKAAEDLANSGNRLIR 241


>gi|119503650|ref|ZP_01625733.1| flagellar hook-associated protein [marine gamma proteobacterium
           HTCC2080]
 gi|119460712|gb|EAW41804.1| flagellar hook-associated protein [marine gamma proteobacterium
           HTCC2080]
          Length = 556

 Score = 39.9 bits (91), Expect = 0.13,   Method: Composition-based stats.
 Identities = 20/102 (19%), Positives = 33/102 (32%), Gaps = 4/102 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +  +  I  + L+     +    +NIAN  T G +  S     +        +   GV+V
Sbjct: 1   MANTLGIGTTALSALQRAISTTGQNIANVNTEGYSRQSVSLSARPAQDIGAGYLGSGVQV 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
             I    + F    D     A++     Y N     E  D  
Sbjct: 61  TSIDRAYNQF-LANDVQQRTASSGYYSLYAN---AAERVDSM 98


>gi|323706357|ref|ZP_08117922.1| flagellar hook-associated protein FlgK [Thermoanaerobacterium
           xylanolyticum LX-11]
 gi|323534319|gb|EGB24105.1| flagellar hook-associated protein FlgK [Thermoanaerobacterium
           xylanolyticum LX-11]
          Length = 478

 Score = 39.9 bits (91), Expect = 0.13,   Method: Composition-based stats.
 Identities = 8/38 (21%), Positives = 20/38 (52%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             V++  E A+M +  + Y A+ + I    +++ T ++
Sbjct: 436 SGVSLDEEMANMLKYQKSYEASARMITVMDELLDTLIN 473



 Score = 33.7 bits (75), Expect = 9.0,   Method: Composition-based stats.
 Identities = 11/34 (32%), Positives = 15/34 (44%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDT 38
               IA +GL      + +   NI+NA T G T
Sbjct: 4  FQGLEIAKTGLFASQQALNLTGHNISNANTPGYT 37


>gi|310659650|ref|YP_003937371.1| flagellar hook-associated protein 1 [Clostridium sticklandii DSM
           519]
 gi|308826428|emb|CBH22466.1| flagellar hook-associated protein 1 [Clostridium sticklandii]
          Length = 518

 Score = 39.9 bits (91), Expect = 0.13,   Method: Composition-based stats.
 Identities = 8/45 (17%), Positives = 19/45 (42%), Gaps = 1/45 (2%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD-LLR 133
           +    V+   E ++M +    Y A  + I    +M+   ++ + R
Sbjct: 471 LSVSGVSQDEEMSNMIKFQHAYNAAARMITTVDEMIDVIINRMGR 515



 Score = 37.2 bits (84), Expect = 0.80,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 24/64 (37%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M    A   IA+SGL      + I   NI+N  T G T        +     +   G  G
Sbjct: 1  MRSTFAGLSIASSGLFAAQRALDITGHNISNTNTRGYTRQRLNQSAQDPMNIQGGQGQLG 60

Query: 61 VRVK 64
          + VK
Sbjct: 61 LGVK 64


>gi|289577712|ref|YP_003476339.1| flagellar hook-associated protein FlgK [Thermoanaerobacter italicus
           Ab9]
 gi|289527425|gb|ADD01777.1| flagellar hook-associated protein FlgK [Thermoanaerobacter italicus
           Ab9]
          Length = 480

 Score = 39.9 bits (91), Expect = 0.13,   Method: Composition-based stats.
 Identities = 7/38 (18%), Positives = 19/38 (50%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             V++  E  +M +  + Y A+ + I    +++ T ++
Sbjct: 436 SGVSLDEEMTNMLKYQKSYAASARMITAIDELLDTLIN 473



 Score = 35.6 bits (80), Expect = 2.2,   Method: Composition-based stats.
 Identities = 14/87 (16%), Positives = 27/87 (31%), Gaps = 1/87 (1%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDP-YRRKTISFEEVMHGSGGVRV 63
               IA +GL V    + +   NIANA T G T            +   +    G    
Sbjct: 4  FQGLEIAKTGLFVSQKALDVTGHNIANANTPGYTRQVVDMVSIAPPTTFGMYDQWGKAIG 63

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIV 90
          + + +     + +    +     +  +
Sbjct: 64 EGVKIQDIRQIRDQFLDNQYRRENKFL 90


>gi|153946948|ref|YP_001399635.1| flagellar basal body rod protein FlgF [Yersinia pseudotuberculosis
           IP 31758]
 gi|152958443|gb|ABS45904.1| flagellar basal-body rod protein FlgF [Yersinia pseudotuberculosis
           IP 31758]
          Length = 243

 Score = 39.9 bits (91), Expect = 0.13,   Method: Composition-based stats.
 Identities = 8/45 (17%), Positives = 21/45 (46%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            ++  NV+ + E       +R + A ++ +K + D+      ++R
Sbjct: 197 HLESSNVSAISEMIASISLSRQFEAQIKMMKVAEDLAQAGNRMIR 241


>gi|301023264|ref|ZP_07187061.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 69-1]
 gi|284920900|emb|CBG33963.1| flagellar basal-body rod protein FlgF [Escherichia coli 042]
 gi|300397109|gb|EFJ80647.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 69-1]
          Length = 251

 Score = 39.9 bits (91), Expect = 0.14,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 32/102 (31%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           N     +T       +   +    +        +     Q+T          +   SG++
Sbjct: 147 NPGDPANTVAPVGRLKLVKATGSEVQRGDDGIFRLSAESQATRGPVLQADPTLRVMSGVL 206

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NVN +   +DM  + R +   ++ I    D       LL
Sbjct: 207 EGSNVNAVAAMSDMIASARRFEMQMKVISSVDDNAGRANQLL 248


>gi|227874517|ref|ZP_03992687.1| flagellar basal body rod protein FlgG [Oribacterium sinus F0268]
 gi|227839636|gb|EEJ50096.1| flagellar basal body rod protein FlgG [Oribacterium sinus F0268]
          Length = 305

 Score = 39.9 bits (91), Expect = 0.14,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 25/62 (40%), Gaps = 2/62 (3%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++ +   A +GL     ++ +I  NIAN  T G       Y  K   ++     SGG + 
Sbjct: 1  MLRAMDSAVAGLRAHQNKLDVIGNNIANVNTFGFKSQG--YSFKDTMYQTSSTSSGGKQE 58

Query: 64 KK 65
            
Sbjct: 59 AS 60


>gi|225375213|ref|ZP_03752434.1| hypothetical protein ROSEINA2194_00838 [Roseburia inulinivorans
          DSM 16841]
 gi|225212880|gb|EEG95234.1| hypothetical protein ROSEINA2194_00838 [Roseburia inulinivorans
          DSM 16841]
          Length = 610

 Score = 39.9 bits (91), Expect = 0.14,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 25/65 (38%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M        IA+SGL+   A +   + NI+N +T G +  +              +GS G
Sbjct: 1  MPSQFFGLTIASSGLSAYQAALNTTANNISNEQTKGYSRQAANLSASDALRVNAKYGSMG 60

Query: 61 VRVKK 65
            V  
Sbjct: 61 SGVTV 65


>gi|160878464|ref|YP_001557432.1| flagellar hook-associated protein FlgK [Clostridium
          phytofermentans ISDg]
 gi|160427130|gb|ABX40693.1| flagellar hook-associated protein FlgK [Clostridium
          phytofermentans ISDg]
          Length = 613

 Score = 39.9 bits (91), Expect = 0.14,   Method: Composition-based stats.
 Identities = 20/70 (28%), Positives = 25/70 (35%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M        I NSGL    A +   + NIAN  T G +      +  T       +G  G
Sbjct: 1  MPSTFFGLSIGNSGLYASQAGLNTTAHNIANIETEGFSRQVAKQQAGTALRVNSSYGMVG 60

Query: 61 VRVKKIGVDQ 70
            V   GV Q
Sbjct: 61 TGVDIKGVTQ 70



 Score = 37.5 bits (85), Expect = 0.61,   Method: Composition-based stats.
 Identities = 14/108 (12%), Positives = 29/108 (26%)

Query: 23  QIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHP 82
             I   +ANA             R     +        V    I   Q++   E      
Sbjct: 502 SSIENGVANADNVQKLLALKDDVRMFGQGKPAQFFQTLVAEIGIDAKQASNFAENQMNIL 561

Query: 83  VANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            A  +  +    V+   E  ++    + Y  + + I     +    ++
Sbjct: 562 SAVQNQRLSISGVDQEEEAMNLVRYQKAYNLSAKVISIMDQIYDRLIN 609


>gi|45659268|ref|YP_003354.1| flagellar hook-associated protein FlgK [Leptospira interrogans
           serovar Copenhageni str. Fiocruz L1-130]
 gi|45602514|gb|AAS71991.1| flagellar hook-associated protein 1 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 636

 Score = 39.9 bits (91), Expect = 0.14,   Method: Composition-based stats.
 Identities = 13/82 (15%), Positives = 34/82 (41%), Gaps = 2/82 (2%)

Query: 51  FEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP--NVNVLVETADMRETN 108
           + +         + K+G +     +EF   + +      ++     VN+  E A+M +  
Sbjct: 551 YSKTTDDFYNTLISKLGTEAREAKQEFGIQNDLMTELENMRQSVMGVNLDEEMANMVQFQ 610

Query: 109 RLYMANLQTIKQSHDMMTTTLD 130
             Y A+ + I   ++++ T ++
Sbjct: 611 HAYNASAKMINTMNEILDTIIN 632



 Score = 36.4 bits (82), Expect = 1.2,   Method: Composition-based stats.
 Identities = 9/59 (15%), Positives = 17/59 (28%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          M    +   I   GL      +Q    NI+NA                  ++  ++ + 
Sbjct: 1  MGSTFSGLEIGKRGLTAHQQALQTTGHNISNADNKHYARQRVTMTAMDPLYDPSLNRAN 59


>gi|311992323|gb|ADQ26735.1| proximal rod protein [Aeromonas hydrophila]
          Length = 131

 Score = 39.9 bits (91), Expect = 0.14,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 45/124 (36%), Gaps = 2/124 (1%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
            +  I    L+V+S R +++S NIANA T G       + +     ++          +K
Sbjct: 6   KAFGIHQYTLSVRSKRAEVLSSNIANADTPGFKARDINFSQALEEAQQQQGFGLATTSEK 65

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
               Q          +P+   +G      V+V  E ++    +  Y  +L+ +      +
Sbjct: 66  HFALQMDAPGVTQYRNPLQPDTG--DGNTVDVQQERSEFLRNSLEYQTSLEFMNSKISGL 123

Query: 126 TTTL 129
              L
Sbjct: 124 LKAL 127


>gi|188534164|ref|YP_001907961.1| flagellar hook-associated protein FlgK [Erwinia tasmaniensis
           Et1/99]
 gi|188029206|emb|CAO97078.1| Flagellar hook-filament junction protein 1 [Erwinia tasmaniensis
           Et1/99]
          Length = 551

 Score = 39.9 bits (91), Expect = 0.14,   Method: Composition-based stats.
 Identities = 14/99 (14%), Positives = 36/99 (36%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +    + A +GL   SA +   S NI N   TG +  +    + + +     +   G  V
Sbjct: 1   MANLINTAMTGLNAASAALNTTSNNITNYAVTGYSRQTTVLAQNSSTLSGSNYYGNGASV 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETA 102
             +  +   F+ +        +++   +   ++ + +  
Sbjct: 61  SNVYREYDQFISKQLLAASTQSSAISTQAGQMSNIDDML 99


>gi|295688393|ref|YP_003592086.1| hypothetical protein Cseg_0963 [Caulobacter segnis ATCC 21756]
 gi|295430296|gb|ADG09468.1| protein of unknown function DUF1078 domain protein [Caulobacter
           segnis ATCC 21756]
          Length = 79

 Score = 39.9 bits (91), Expect = 0.14,   Method: Composition-based stats.
 Identities = 6/39 (15%), Positives = 16/39 (41%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +V+   E  +       + AN + ++ +  M    L++ 
Sbjct: 40  DVDYGKERVEQISAQYDFRANAKVVQTADQMTGALLNIK 78


>gi|260767924|ref|ZP_05876858.1| flagellar basal-body rod protein FlgF [Vibrio furnissii CIP 102972]
 gi|260615954|gb|EEX41139.1| flagellar basal-body rod protein FlgF [Vibrio furnissii CIP 102972]
          Length = 243

 Score = 39.9 bits (91), Expect = 0.14,   Method: Composition-based stats.
 Identities = 8/53 (15%), Positives = 22/53 (41%)

Query: 80  GHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
            + V  A   ++  NV+ + E  ++    R +   ++ +K +  +      L+
Sbjct: 188 DNSVQLAPEHIEGSNVSAIDELLNVMSLTRNFEMQIRMMKTAETLAQAGNKLM 240


>gi|227328339|ref|ZP_03832363.1| flagellar basal body rod protein FlgF [Pectobacterium carotovorum
           subsp. carotovorum WPP14]
          Length = 251

 Score = 39.5 bits (90), Expect = 0.14,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 30/102 (29%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           NA    +T       +   +  + +  S     +     Q            V    G++
Sbjct: 147 NAGDPPNTIAQLGRLKLVKATGQEVERSDDGLFRLTQQAQQQRGNVLQNDPTVRIMPGVI 206

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NVN +    DM    R +   ++ I    D       +L
Sbjct: 207 EGSNVNTVDTMVDMIANARRFEMQMKVISSVDDNAQRANQIL 248


>gi|73539451|ref|YP_299818.1| flagellar basal body rod protein FlgF [Ralstonia eutropha JMP134]
 gi|72122788|gb|AAZ64974.1| Protein of unknown function DUF1078 [Ralstonia eutropha JMP134]
          Length = 247

 Score = 39.5 bits (90), Expect = 0.14,   Method: Composition-based stats.
 Identities = 12/62 (19%), Positives = 20/62 (32%)

Query: 71  STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
               +  +    V   SG ++  NVN      DM    R +   ++ I  +         
Sbjct: 183 RPGAQPLEADPTVRVVSGAIEGSNVNPTEAMVDMIANARRFEMQMKMITGADTNDQRANQ 242

Query: 131 LL 132
           LL
Sbjct: 243 LL 244


>gi|315179627|gb|ADT86541.1| flagellar basal-body rod protein FlgF [Vibrio furnissii NCTC 11218]
          Length = 243

 Score = 39.5 bits (90), Expect = 0.14,   Method: Composition-based stats.
 Identities = 8/53 (15%), Positives = 22/53 (41%)

Query: 80  GHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
            + V  A   ++  NV+ + E  ++    R +   ++ +K +  +      L+
Sbjct: 188 DNSVQLAPEHIEGSNVSAIDELLNVMSLTRNFEMQIRMMKTAETLAQAGNKLM 240


>gi|269960122|ref|ZP_06174498.1| putative flagellar hook-associated protein 1 [Vibrio harveyi
          1DA3]
 gi|269835093|gb|EEZ89176.1| putative flagellar hook-associated protein 1 [Vibrio harveyi
          1DA3]
          Length = 457

 Score = 39.5 bits (90), Expect = 0.14,   Method: Composition-based stats.
 Identities = 15/69 (21%), Positives = 24/69 (34%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          +   +IA SGL      + + ++N+AN  T G +                +    GV V 
Sbjct: 1  MNLVNIALSGLNANRVALDVTAQNVANINTPGYSRQQALTASVGDGKYNKLSPGMGVEVT 60

Query: 65 KIGVDQSTF 73
           I      F
Sbjct: 61 SIRRVTDQF 69


>gi|221639489|ref|YP_002525751.1| Flagellar hook-associated protein 1 [Rhodobacter sphaeroides
          KD131]
 gi|221160270|gb|ACM01250.1| Flagellar hook-associated protein 1 [Rhodobacter sphaeroides
          KD131]
          Length = 1363

 Score = 39.5 bits (90), Expect = 0.14,   Method: Composition-based stats.
 Identities = 13/69 (18%), Positives = 25/69 (36%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          ++   IA SGL    + + + +ENIAN  T G         +           +   +  
Sbjct: 1  MSILDIARSGLLSYRSALSVTAENIANVNTEGYVRREAVLAQVPGGQISPTSAATSGQGV 60

Query: 65 KIGVDQSTF 73
          ++   +  F
Sbjct: 61 RVEDVRRAF 69


>gi|170680164|ref|YP_001744103.1| flagellar basal body rod protein FlgF [Escherichia coli SMS-3-5]
 gi|218704485|ref|YP_002412004.1| flagellar basal body rod protein FlgF [Escherichia coli UMN026]
 gi|293404361|ref|ZP_06648355.1| flgF [Escherichia coli FVEC1412]
 gi|298380141|ref|ZP_06989746.1| flagellar basal-body rod protein flgF [Escherichia coli FVEC1302]
 gi|300899596|ref|ZP_07117835.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 198-1]
 gi|307310145|ref|ZP_07589795.1| flagellar basal-body rod protein FlgF [Escherichia coli W]
 gi|331662483|ref|ZP_08363406.1| flagellar basal-body rod protein FlgF [Escherichia coli TA143]
 gi|170517882|gb|ACB16060.1| flagellar basal-body rod protein FlgF [Escherichia coli SMS-3-5]
 gi|218431582|emb|CAR12461.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli UMN026]
 gi|291428947|gb|EFF01972.1| flgF [Escherichia coli FVEC1412]
 gi|298279839|gb|EFI21347.1| flagellar basal-body rod protein flgF [Escherichia coli FVEC1302]
 gi|300356867|gb|EFJ72737.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 198-1]
 gi|306909863|gb|EFN40357.1| flagellar basal-body rod protein FlgF [Escherichia coli W]
 gi|315060355|gb|ADT74682.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli W]
 gi|320200973|gb|EFW75557.1| Flagellar basal-body rod protein FlgF [Escherichia coli EC4100B]
 gi|323379084|gb|ADX51352.1| flagellar basal-body rod protein FlgF [Escherichia coli KO11]
 gi|331060905|gb|EGI32869.1| flagellar basal-body rod protein FlgF [Escherichia coli TA143]
          Length = 251

 Score = 39.5 bits (90), Expect = 0.14,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 32/102 (31%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           N     +T       +   +    +        +     Q+T          +   SG++
Sbjct: 147 NPGDPANTVAPVGRLKLVKATGSEVQRGDDGIFRLSAESQATRGPVLQADPTLRVMSGVL 206

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NVN +   +DM  + R +   ++ I    D       LL
Sbjct: 207 EGSNVNAVAAMSDMIASARRFEMQMKVISSVDDNAGRANQLL 248


>gi|11136619|gb|AAG31286.1|AF317649_1 flagellar hook-associated protein 1 [Rhodobacter sphaeroides]
          Length = 1363

 Score = 39.5 bits (90), Expect = 0.14,   Method: Composition-based stats.
 Identities = 13/69 (18%), Positives = 25/69 (36%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          ++   IA SGL    + + + +ENIAN  T G         +           +   +  
Sbjct: 1  MSILDIARSGLLSYRSALSVTAENIANVNTEGYVRREAVLAQVPGGQISPTSAATSGQGV 60

Query: 65 KIGVDQSTF 73
          ++   +  F
Sbjct: 61 RVEDVRRAF 69


>gi|26247217|ref|NP_753257.1| flagellar basal body rod protein FlgF [Escherichia coli CFT073]
 gi|91210229|ref|YP_540215.1| flagellar basal body rod protein FlgF [Escherichia coli UTI89]
 gi|117623263|ref|YP_852176.1| flagellar basal body rod protein FlgF [Escherichia coli APEC O1]
 gi|227886565|ref|ZP_04004370.1| flagellar basal body rod protein FlgF [Escherichia coli 83972]
 gi|237706937|ref|ZP_04537418.1| flagellar basal-body rod protein flgF [Escherichia sp. 3_2_53FAA]
 gi|300974381|ref|ZP_07172593.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 45-1]
 gi|301051139|ref|ZP_07197969.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 185-1]
 gi|26107618|gb|AAN79817.1|AE016759_91 Flagellar basal-body rod protein flgF [Escherichia coli CFT073]
 gi|91071803|gb|ABE06684.1| flagellar basal-body rod protein FlgF [Escherichia coli UTI89]
 gi|115512387|gb|ABJ00462.1| flagellar basal-body rod protein FlgF [Escherichia coli APEC O1]
 gi|226898147|gb|EEH84406.1| flagellar basal-body rod protein flgF [Escherichia sp. 3_2_53FAA]
 gi|227836769|gb|EEJ47235.1| flagellar basal body rod protein FlgF [Escherichia coli 83972]
 gi|294491134|gb|ADE89890.1| flagellar basal-body rod protein FlgF [Escherichia coli IHE3034]
 gi|300297160|gb|EFJ53545.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 185-1]
 gi|300410624|gb|EFJ94162.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 45-1]
 gi|307553079|gb|ADN45854.1| flagellar basal-body rod protein FlgF [Escherichia coli ABU 83972]
 gi|307627453|gb|ADN71757.1| flagellar basal body rod protein FlgF [Escherichia coli UM146]
 gi|315287368|gb|EFU46779.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 110-3]
 gi|315291071|gb|EFU50434.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 153-1]
 gi|320196441|gb|EFW71064.1| Flagellar basal-body rod protein FlgF [Escherichia coli WV_060327]
 gi|323953237|gb|EGB49103.1| flagellar basal-body rod protein FlgF [Escherichia coli H252]
 gi|323957901|gb|EGB53613.1| flagellar basal-body rod protein FlgF [Escherichia coli H263]
          Length = 251

 Score = 39.5 bits (90), Expect = 0.14,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 32/102 (31%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           N     +T       +   +    +        +     Q+T          +   SG++
Sbjct: 147 NPGDPANTVAPVGRLKLVKATGSEVQRGDDGIFRLSAESQATRGPVLQADPTLRVMSGVL 206

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NVN +   +DM  + R +   ++ I    D       LL
Sbjct: 207 EGSNVNAVAAMSDMIASARRFEMQMKVISSVDDNAGRANQLL 248


>gi|315635632|ref|ZP_07890895.1| flagellar hook-associated protein FlgK [Arcobacter butzleri JV22]
 gi|315479929|gb|EFU70599.1| flagellar hook-associated protein FlgK [Arcobacter butzleri JV22]
          Length = 636

 Score = 39.5 bits (90), Expect = 0.14,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 29/68 (42%), Gaps = 7/68 (10%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            L  + ++A +GL      ++ +S NIAN  T G       Y+++     E+      +
Sbjct: 1  MSLFGTFNVAQTGLNASRYGIETVSNNIANKDTDG-------YKKRVTDLSEIGQMGSSI 53

Query: 62 RVKKIGVD 69
            + + VD
Sbjct: 54 TGRGVNVD 61



 Score = 38.3 bits (87), Expect = 0.33,   Method: Composition-based stats.
 Identities = 10/37 (27%), Positives = 16/37 (43%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           V+   E  ++ +    Y AN Q I    +M+   L L
Sbjct: 598 VDEDDEMVNLMKLQAAYSANAQMITAVDEMIKVILGL 634


>gi|331682579|ref|ZP_08383198.1| flagellar basal-body rod protein FlgF [Escherichia coli H299]
 gi|331080210|gb|EGI51389.1| flagellar basal-body rod protein FlgF [Escherichia coli H299]
          Length = 251

 Score = 39.5 bits (90), Expect = 0.14,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 32/102 (31%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           N     +T       +   +    +        +     Q+T          +   SG++
Sbjct: 147 NPGDPANTVAPVGRLKLVKATGSEVQRGDDGIFRLSAETQTTRGPVLQADPTLRVMSGVL 206

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NVN +   +DM  + R +   ++ I    D       LL
Sbjct: 207 EGSNVNAVAAMSDMIASARRFEMQMKVISSVDDNAGRANQLL 248


>gi|4580018|gb|AAD24206.1|AF049342_4 flagellar hook protein FlgE [Treponema denticola ATCC 33520]
          Length = 237

 Score = 39.5 bits (90), Expect = 0.14,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 20/42 (47%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S     +G+     RM +I  N+AN  TTG   G   ++
Sbjct: 1  MMRSLFSGVTGMQNHQTRMDVIGNNVANVNTTGFKRGRVNFQ 42


>gi|88704305|ref|ZP_01102019.1| flagellar basal-body rod protein FlgF [Congregibacter litoralis
           KT71]
 gi|88701356|gb|EAQ98461.1| flagellar basal-body rod protein FlgF [Congregibacter litoralis
           KT71]
          Length = 251

 Score = 39.5 bits (90), Expect = 0.14,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 24/44 (54%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  NVN +     M E +R +   ++ +K + D+ T++  L+R
Sbjct: 205 LESSNVNPVTAMVRMIELSRQFEHYVKLMKTAEDVDTSSASLMR 248


>gi|260574402|ref|ZP_05842406.1| flagellar basal-body rod protein FlgF [Rhodobacter sp. SW2]
 gi|259023298|gb|EEW26590.1| flagellar basal-body rod protein FlgF [Rhodobacter sp. SW2]
          Length = 236

 Score = 39.5 bits (90), Expect = 0.14,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 21/58 (36%), Gaps = 1/58 (1%)

Query: 77  FDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD-LLR 133
            +P        G ++  NVN + E A M E  R Y    + +      +   +  L R
Sbjct: 179 MEPVEDGQILQGYIEDSNVNPISEIARMIEVQRAYELGQKFLDNEDARVRGVIQTLGR 236


>gi|256371026|ref|YP_003108850.1| flagellar hook-associated protein FlgK [Acidimicrobium
          ferrooxidans DSM 10331]
 gi|256007610|gb|ACU53177.1| flagellar hook-associated protein FlgK [Acidimicrobium
          ferrooxidans DSM 10331]
          Length = 462

 Score = 39.5 bits (90), Expect = 0.14,   Method: Composition-based stats.
 Identities = 22/94 (23%), Positives = 39/94 (41%), Gaps = 3/94 (3%)

Query: 6  ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
           + +IA SGL  Q   + ++++N+ANA T G    S     + +    V     GV V+ 
Sbjct: 4  GALYIALSGLEAQQVGLDVVAQNVANANTPGYQSESVDLANQQLPGSPVGD---GVTVQG 60

Query: 66 IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
          +   Q+TF    + G   A++        +    
Sbjct: 61 VLQAQNTFARSLELGSQAASSYATQLSSTLTAAQ 94


>gi|157371206|ref|YP_001479195.1| flagellar basal body rod protein FlgF [Serratia proteamaculans 568]
 gi|157322970|gb|ABV42067.1| flagellar basal-body rod protein FlgF [Serratia proteamaculans 568]
          Length = 251

 Score = 39.5 bits (90), Expect = 0.14,   Method: Composition-based stats.
 Identities = 14/102 (13%), Positives = 28/102 (27%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           NA    +T       +   +    +        +     Q     +      V    G++
Sbjct: 147 NAGDPPNTLAQIGRLKLVKADAREVTRGDDGLFRLTPETQQQRGNQLPNDPLVRVMPGVL 206

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NV  +    DM    R +   ++ I    +       LL
Sbjct: 207 EGSNVKPMETMVDMIANARRFEMQMKVIHSVDENEQRANSLL 248


>gi|191168482|ref|ZP_03030270.1| flagellar basal-body rod protein FlgF [Escherichia coli B7A]
 gi|190901501|gb|EDV61262.1| flagellar basal-body rod protein FlgF [Escherichia coli B7A]
          Length = 251

 Score = 39.5 bits (90), Expect = 0.14,   Method: Composition-based stats.
 Identities = 15/102 (14%), Positives = 31/102 (30%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           N     +T       +   +    +        +     Q+T          +    G++
Sbjct: 147 NPGDPANTVAPVGRLKLVKATGSEVQRGDDGIFRLSAESQATRGPILQADPTLRVMPGVL 206

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NVN +   +DM  + R +   ++ I    D       LL
Sbjct: 207 EGSNVNAVAAMSDMIASARRFEMQMKVISSVDDNAGRANQLL 248


>gi|222824020|ref|YP_002575594.1| flagellar distal rod protein FlgG [Campylobacter lari RM2100]
 gi|222539242|gb|ACM64343.1| flagellar distal rod protein FlgG [Campylobacter lari RM2100]
          Length = 269

 Score = 39.5 bits (90), Expect = 0.14,   Method: Composition-based stats.
 Identities = 11/60 (18%), Positives = 22/60 (36%), Gaps = 1/60 (1%)

Query: 72  TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS-HDMMTTTLD 130
              +  D  +  A   G  +  NVN + E   + E NR+     + +     D+    ++
Sbjct: 204 DLNKVRDLPNSNAIRQGFTQGSNVNPVTEMVGLIEANRMVEMYQKVMTSHMDDLNQEAIN 263


>gi|289679022|ref|ZP_06499912.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv.
           syringae FF5]
          Length = 151

 Score = 39.5 bits (90), Expect = 0.15,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 23/56 (41%), Gaps = 3/56 (5%)

Query: 80  GHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS---HDMMTTTLDLL 132
              V   SG ++  NVN + E   +   +R +  +++ +K +      M   L L 
Sbjct: 96  DATVQVESGFLQASNVNAVEEMTSVLALSRQFELHVKMMKTAEEDDQSMARVLQLG 151


>gi|218288303|ref|ZP_03492602.1| protein of unknown function DUF1078 domain protein
           [Alicyclobacillus acidocaldarius LAA1]
 gi|218241662|gb|EED08835.1| protein of unknown function DUF1078 domain protein
           [Alicyclobacillus acidocaldarius LAA1]
          Length = 301

 Score = 39.5 bits (90), Expect = 0.15,   Method: Composition-based stats.
 Identities = 8/45 (17%), Positives = 21/45 (46%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
           ++  NV++  + A+M      Y+AN   I   + ++   +++   
Sbjct: 257 LEGSNVDLSQQFAEMIVAQNAYVANTHMIGTDNAILQALVNMKNS 301



 Score = 37.9 bits (86), Expect = 0.52,   Method: Composition-based stats.
 Identities = 15/95 (15%), Positives = 30/95 (31%), Gaps = 4/95 (4%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR----RKTISFEEVMHGSG 59
          ++ S + A SG+      + ++  NIAN  T G       +     +           S 
Sbjct: 1  MLRSMNSAISGMQAFQTDLDVVGNNIANVETVGFKQSDVQFADLLSQTMSLGTAGTSPST 60

Query: 60 GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPN 94
          G      G+  +   +        A    + + P+
Sbjct: 61 GGSGATTGIGGTNPEQVGLGVQVAATQMDMSQGPD 95


>gi|91791415|ref|YP_561066.1| protein of unknown function DUF1078-like protein [Shewanella
           denitrificans OS217]
 gi|91713417|gb|ABE53343.1| protein of unknown function DUF1078-like protein [Shewanella
           denitrificans OS217]
          Length = 253

 Score = 39.5 bits (90), Expect = 0.15,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 24/48 (50%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             G+++  NV++  E  +M    R Y  N + ++ S  ++ T  +L R
Sbjct: 206 QQGMLESSNVSMNQEMMNMMMAQRSYQLNARLVQVSDQILETLNNLRR 253



 Score = 39.1 bits (89), Expect = 0.21,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 26/70 (37%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +I + +IA SGL  +  ++  I+ NIAN  T G       +        +        + 
Sbjct: 1  MIDALYIAESGLDAKQKQLDAIAHNIANVSTPGYKTSQMSFMTVVQEDRDNSGQIVSSQG 60

Query: 64 KKIGVDQSTF 73
            +   QS  
Sbjct: 61 LGVMAQQSPL 70


>gi|82544457|ref|YP_408404.1| flagellar basal body rod protein FlgF [Shigella boydii Sb227]
 gi|187731130|ref|YP_001880751.1| flagellar basal body rod protein FlgF [Shigella boydii CDC 3083-94]
 gi|81245868|gb|ABB66576.1| cell-proximal portion of basal-body rod [Shigella boydii Sb227]
 gi|187428122|gb|ACD07396.1| flagellar basal-body rod protein FlgF [Shigella boydii CDC 3083-94]
 gi|320186976|gb|EFW61689.1| Flagellar basal-body rod protein FlgF [Shigella flexneri CDC
           796-83]
 gi|332094101|gb|EGI99153.1| flagellar basal-body rod protein FlgF [Shigella boydii 3594-74]
          Length = 251

 Score = 39.5 bits (90), Expect = 0.15,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 32/102 (31%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           N     +T       +   +    +        +     Q+T          +   SG++
Sbjct: 147 NPGDPANTVAPVGRLKLVKATGSEVQRGDDGIFRLSAETQATRGPVLQADPTLRVMSGVL 206

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NVN +   +DM  + R +   ++ I    D       LL
Sbjct: 207 EGSNVNAVAAMSDMIASARRFEMQMKVISSVDDNAGRANQLL 248


>gi|332558502|ref|ZP_08412824.1| FlgK (HAP1) [Rhodobacter sphaeroides WS8N]
 gi|332276214|gb|EGJ21529.1| FlgK (HAP1) [Rhodobacter sphaeroides WS8N]
          Length = 1363

 Score = 39.5 bits (90), Expect = 0.15,   Method: Composition-based stats.
 Identities = 13/69 (18%), Positives = 25/69 (36%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          ++   IA SGL    + + + +ENIAN  T G         +           +   +  
Sbjct: 1  MSILDIARSGLLSYRSALSVTAENIANVNTEGYVRREAVLAQVPGGQISPTSAATSGQGV 60

Query: 65 KIGVDQSTF 73
          ++   +  F
Sbjct: 61 RVEDVRRAF 69


>gi|134095091|ref|YP_001100166.1| flagellar hook-associated protein FlgK [Herminiimonas
           arsenicoxydans]
 gi|133738994|emb|CAL62042.1| putative flagellar hook-associated protein 1 FlgK-like
           [Herminiimonas arsenicoxydans]
          Length = 659

 Score = 39.5 bits (90), Expect = 0.15,   Method: Composition-based stats.
 Identities = 11/84 (13%), Positives = 25/84 (29%), Gaps = 2/84 (2%)

Query: 52  EEVMHGSGGVRVKKIGVDQSTFVEEFDPGHP--VANASGIVKYPNVNVLVETADMRETNR 109
               + +    V ++G                     +       VN+  E  ++    +
Sbjct: 576 TASYNSAYSQLVSQVGNKTRELETNSLAEGALLKQMQTAQQSESGVNLDEEATNLLRYQQ 635

Query: 110 LYMANLQTIKQSHDMMTTTLDLLR 133
            Y A+ + ++   DM    + L R
Sbjct: 636 AYQASGKVMQAVSDMFDVLISLGR 659



 Score = 35.6 bits (80), Expect = 2.5,   Method: Composition-based stats.
 Identities = 18/99 (18%), Positives = 30/99 (30%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +     IA SGLA   A +     NIAN  T G +                 +   G  V
Sbjct: 1   MSNLLSIAKSGLAAAHAGIATTGHNIANQATPGYSRQLVIQASLGGQNIGGGYIGNGTNV 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETA 102
           + +    + F+         + +     Y  +N +    
Sbjct: 61  ETVRRIYNDFLGAQVVSAQSSKSQLDTYYMQINKVNNML 99


>gi|77463646|ref|YP_353150.1| FlgK flagellar hook-associated protein 1 [Rhodobacter sphaeroides
          2.4.1]
 gi|77388064|gb|ABA79249.1| FlgK flagellar hook-associated protein 1 [Rhodobacter sphaeroides
          2.4.1]
          Length = 1363

 Score = 39.5 bits (90), Expect = 0.15,   Method: Composition-based stats.
 Identities = 13/69 (18%), Positives = 25/69 (36%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          ++   IA SGL    + + + +ENIAN  T G         +           +   +  
Sbjct: 1  MSILDIARSGLLSYRSALSVTAENIANVNTEGYVRREAVLAQVPGGQISPTSAATSGQGV 60

Query: 65 KIGVDQSTF 73
          ++   +  F
Sbjct: 61 RVEDVRRAF 69


>gi|90422607|ref|YP_530977.1| flagellar basal body rod protein FlgB [Rhodopseudomonas palustris
           BisB18]
 gi|90104621|gb|ABD86658.1| flagellar basal body rod protein [Rhodopseudomonas palustris
           BisB18]
          Length = 125

 Score = 39.5 bits (90), Expect = 0.15,   Method: Composition-based stats.
 Identities = 28/129 (21%), Positives = 43/129 (33%), Gaps = 10/129 (7%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M  +     +A+S     S R   IS N+ANA T G       Y+ K I     +     
Sbjct: 1   MGPIY-LFDVASSQAQWLSLRQATISSNVANANTPG-------YQAKDIESFSKLLDGKL 52

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPN--VNVLVETADMRETNRLYMANLQTI 118
           + V              +PG      S  + +    V++  E     + NR Y  N   +
Sbjct: 53  IPVAVTSPMHIASGTAANPGETREKDSWDIVHSGNSVSLEQEMLKAGDVNRDYSLNTAIV 112

Query: 119 KQSHDMMTT 127
           K    M  +
Sbjct: 113 KSFQRMFMS 121


>gi|271500072|ref|YP_003333097.1| flagellar hook-associated protein FlgK [Dickeya dadantii Ech586]
 gi|270343627|gb|ACZ76392.1| flagellar hook-associated protein FlgK [Dickeya dadantii Ech586]
          Length = 638

 Score = 39.5 bits (90), Expect = 0.15,   Method: Composition-based stats.
 Identities = 16/96 (16%), Positives = 36/96 (37%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +    +   SGL+   A +  +S NI+N    G +  +    +   +     +   GV V
Sbjct: 1  MSNLINTGMSGLSAAQAALSTVSNNISNQAVAGYSRQNALLAQNNGTTTSAGYIGNGVTV 60

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
            I  D + F+ +        +++    Y  ++ + 
Sbjct: 61 VSINRDYNDFIAKQLRAAQATSSATTSYYDQISKID 96



 Score = 35.2 bits (79), Expect = 3.1,   Method: Composition-based stats.
 Identities = 21/128 (16%), Positives = 42/128 (32%), Gaps = 5/128 (3%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +  S+ IA +G ++ S    +     A A     T      +         + G  G + 
Sbjct: 515 ISDSSKIAAAGSSLTSTGGGVSDNTNAKALLNLQTVKVVEGKSSISQAYASLVGDIGNKT 574

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
               V  ++             +        VN+  E  D+    + YMAN + I+ +  
Sbjct: 575 STAKVTDTSQKNVVSQLTTEQQS-----VSGVNLDEEYGDLVRFQQYYMANAKVIQTAST 629

Query: 124 MMTTTLDL 131
           +  + L +
Sbjct: 630 IFDSLLAI 637


>gi|119947171|ref|YP_944851.1| flagellar hook-associated protein FlgK [Psychromonas ingrahamii 37]
 gi|119865775|gb|ABM05252.1| flagellar hook-associated protein FlgK [Psychromonas ingrahamii 37]
          Length = 454

 Score = 39.5 bits (90), Expect = 0.15,   Method: Composition-based stats.
 Identities = 19/98 (19%), Positives = 33/98 (33%), Gaps = 4/98 (4%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           ++  +IA SG++     + I ++NIANA T G +           S         GV V 
Sbjct: 1   MSIYNIALSGVSANRTALNITAQNIANANTAGHSRQQAV----QSSITRSNDVGAGVEVS 56

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETA 102
            I      F+            +      ++  L +  
Sbjct: 57  SIRRMADQFIISQLRSSNTELGNSSYSASSLGQLEQIV 94



 Score = 36.8 bits (83), Expect = 1.1,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 17/39 (43%)

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
              VN   E A++      Y AN++ I  ++ M  + L 
Sbjct: 414 LSGVNSDEEAANLMIYANAYEANMKVISTANQMFNSILR 452


>gi|126462478|ref|YP_001043592.1| flagellar hook-associated protein FlgK [Rhodobacter sphaeroides
          ATCC 17029]
 gi|126104142|gb|ABN76820.1| flagellar hook-associated protein FlgK [Rhodobacter sphaeroides
          ATCC 17029]
          Length = 1363

 Score = 39.5 bits (90), Expect = 0.15,   Method: Composition-based stats.
 Identities = 13/69 (18%), Positives = 25/69 (36%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          ++   IA SGL    + + + +ENIAN  T G         +           +   +  
Sbjct: 1  MSILDIARSGLLSYRSALSVTAENIANVNTEGYVRREAVLAQVPGGQISPTSAATSGQGV 60

Query: 65 KIGVDQSTF 73
          ++   +  F
Sbjct: 61 RVEDVRRAF 69


>gi|311280016|ref|YP_003942247.1| fagellar hook-basal body protein [Enterobacter cloacae SCF1]
 gi|308749211|gb|ADO48963.1| fagellar hook-basal body protein [Enterobacter cloacae SCF1]
          Length = 251

 Score = 39.5 bits (90), Expect = 0.15,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 30/102 (29%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           N     +T       +   +    +        +     Q+T          V   SG++
Sbjct: 147 NPGDPANTIAPVGRLKMVKATNTEVARGDDGMFRLTAAAQATRGPVLQADQSVRLQSGVL 206

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NV  +   ADM  + R +   ++ I            LL
Sbjct: 207 EGSNVKAVAAMADMISSARRFEMQMKVISSVDTNEQKANQLL 248


>gi|228952118|ref|ZP_04114213.1| Flagellar hook-associated protein FlgK [Bacillus thuringiensis
           serovar kurstaki str. T03a001]
 gi|228807650|gb|EEM54174.1| Flagellar hook-associated protein FlgK [Bacillus thuringiensis
           serovar kurstaki str. T03a001]
          Length = 432

 Score = 39.5 bits (90), Expect = 0.15,   Method: Composition-based stats.
 Identities = 14/110 (12%), Positives = 34/110 (30%), Gaps = 12/110 (10%)

Query: 25  ISENIANARTTGDTPGSDPYRRK-TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPV 83
            + N+A     G   G    +             S     + I  D    +++       
Sbjct: 334 TANNLAAITDKGYKDGLTYKQALDQFLVGVASDKSSVNAYQNIHKDLLEGIQQEKMS--- 390

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
                      VN+  E  ++    + ++AN + I   +++  +   ++R
Sbjct: 391 --------IEGVNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSLFSIIR 432



 Score = 37.2 bits (84), Expect = 0.81,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 30/91 (32%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
          +   SG+      +Q   +N++N  T G       Y     S         G  V+ +GV
Sbjct: 7  NTPLSGMLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGSAGGSKGYAPEQRIGYGVQTLGV 66

Query: 69 DQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
          D+ T   +    +   +      Y N  +  
Sbjct: 67 DRITDEVKTKQYNDQMSQFSYYAYMNSTLSR 97


>gi|73539447|ref|YP_299814.1| flagellar basal body rod protein FlgB [Ralstonia eutropha JMP134]
 gi|72122784|gb|AAZ64970.1| Flagellar basal-body rod protein FlgB [Ralstonia eutropha JMP134]
          Length = 135

 Score = 39.5 bits (90), Expect = 0.15,   Method: Composition-based stats.
 Identities = 22/133 (16%), Positives = 42/133 (31%), Gaps = 3/133 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           +D L ++       L++++ R  +I+ NIA+A T G       +        E      G
Sbjct: 2   IDRLDSALRFQQEALSLRTQRQSVIASNIAHADTPGYKARDFDFSSTLAQTMERGRRPDG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVA---NASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           V +    V              +A        V    V +  E     + +  + +NL  
Sbjct: 62  VSLSTTSVRHLPAQAPTRDDADLAYRIPLQSSVDGNTVEMDTERVAFADNSVHFESNLTV 121

Query: 118 IKQSHDMMTTTLD 130
           +      M   + 
Sbjct: 122 VSSKIKTMLAAIQ 134


>gi|126176150|ref|YP_001052299.1| flagellar hook-associated protein FlgK [Shewanella baltica OS155]
 gi|125999355|gb|ABN63430.1| flagellar hook-associated protein FlgK [Shewanella baltica OS155]
          Length = 457

 Score = 39.5 bits (90), Expect = 0.15,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 16/38 (42%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             VN   E  ++    + YMAN + I  +  +  T L 
Sbjct: 418 SGVNPDEEGINLIIYQQSYMANAKVISTADQLFQTMLS 455


>gi|328543157|ref|YP_004303266.1| flagella basal body rod protein [polymorphum gilvum SL003B-26A1]
 gi|326412903|gb|ADZ69966.1| Flagella basal body rod protein [Polymorphum gilvum SL003B-26A1]
          Length = 245

 Score = 39.5 bits (90), Expect = 0.15,   Method: Composition-based stats.
 Identities = 11/87 (12%), Positives = 28/87 (32%), Gaps = 6/87 (6%)

Query: 44  YRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETAD 103
             R  +   +    +  +    +  D    V               ++  NV  +VE   
Sbjct: 158 RGRLRLVTFDQPQNARAIGNNLLLYDDPQPVTRVKVIQGG------LENSNVQGVVEVTQ 211

Query: 104 MRETNRLYMANLQTIKQSHDMMTTTLD 130
           + +  R Y    + + QS +++   ++
Sbjct: 212 IIDITRKYETVSKLLNQSDELLRQAIE 238


>gi|325291942|ref|YP_004277806.1| flagellar basal body rod protein FlgB [Agrobacterium sp. H13-3]
 gi|325059795|gb|ADY63486.1| flagellar basal body rod protein FlgB [Agrobacterium sp. H13-3]
          Length = 130

 Score = 39.5 bits (90), Expect = 0.15,   Method: Composition-based stats.
 Identities = 25/113 (22%), Positives = 43/113 (38%), Gaps = 4/113 (3%)

Query: 19  SARMQIISENIANARTTG-DTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEF 77
           S R ++++ NIANA T         P+     +  + +  +          + S  +   
Sbjct: 18  SVRQEVVATNIANANTPKFHAKDVSPFEAVMQATSQQVGMAKTHPAHFGASELSENIAVR 77

Query: 78  DPGHPVANASGIVKYPN-VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
              +P+ N  G+ +  N V +  E     E  R Y  N   +K  H MM  T+
Sbjct: 78  --DNPINNEIGMQESGNSVALAEEMTKTGEIKRQYDLNASLVKSFHRMMLMTV 128


>gi|317492427|ref|ZP_07950856.1| flagellar basal-body rod protein FlgF [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316919766|gb|EFV41096.1| flagellar basal-body rod protein FlgF [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 251

 Score = 39.5 bits (90), Expect = 0.15,   Method: Composition-based stats.
 Identities = 14/101 (13%), Positives = 27/101 (26%)

Query: 32  ARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVK 91
           A    +T       +   +  + M              Q            +    G+++
Sbjct: 148 AGDQPNTTTQVGRLKLVKATSQEMAHGDDGLFHLTPEAQQQRGATLTLDPEMRLMPGVLE 207

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
             NV  +    DM    R +   ++ I+   D       LL
Sbjct: 208 GSNVKPVDTMVDMIANARRFEMQMKVIRSVDDNEQKANQLL 248


>gi|300928371|ref|ZP_07143905.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 187-1]
 gi|300463629|gb|EFK27122.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 187-1]
          Length = 251

 Score = 39.5 bits (90), Expect = 0.15,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 32/102 (31%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           N     +T       +   +    +        +     Q+T          +   SG++
Sbjct: 147 NPGDPANTVAPVGRLKLVKATGSEVQRGDDGIFRLSAETQATRGPVLQADPTLRVMSGVL 206

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NVN +   +DM  + R +   ++ I    D       LL
Sbjct: 207 EGSNVNAVAAMSDMIASARRFEMQMKVISSVDDNAGRANQLL 248


>gi|259417088|ref|ZP_05741007.1| flagellar basal body rod protein FlgB [Silicibacter sp. TrichCH4B]
 gi|259345994|gb|EEW57808.1| flagellar basal body rod protein FlgB [Silicibacter sp. TrichCH4B]
          Length = 138

 Score = 39.5 bits (90), Expect = 0.15,   Method: Composition-based stats.
 Identities = 26/131 (19%), Positives = 46/131 (35%), Gaps = 7/131 (5%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGD-TPGSDPYRRKTISFEEVMHGSGGVRV 63
           +   +IA S       R  ++SENIANA T G       P++    + E           
Sbjct: 14  LNVFNIAYSMATHAGKRQALVSENIANADTPGYLAKDIKPFKEVFAAGEAQGDMIASRSS 73

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
              G + S F           + +G     +V++  +  +  E  R +   L   + S +
Sbjct: 74  HINGANGSGFDWAVTTDDSAVDPNGN----SVSLEEQILNGIEAKRQHDRALAVYRSSMN 129

Query: 124 MMTTTLDLLRD 134
           ++     L R 
Sbjct: 130 VLRA--SLGRS 138


>gi|188582487|ref|YP_001925932.1| flagellar basal body rod protein FlgF [Methylobacterium populi
           BJ001]
 gi|179345985|gb|ACB81397.1| flagellar basal body rod protein [Methylobacterium populi BJ001]
          Length = 246

 Score = 39.5 bits (90), Expect = 0.15,   Method: Composition-based stats.
 Identities = 21/116 (18%), Positives = 39/116 (33%), Gaps = 3/116 (2%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +  +  +  S  A  +  + +I+ N+AN  TTG    S  ++   +            R 
Sbjct: 1   MQNALFVGVSAQAALARELDVIANNMANVSTTGFKARSARFQEYLMPVASADSFQRSDRR 60

Query: 64  KKIGVDQ-STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNR--LYMANLQ 116
               +DQ +       P  P  N   +    +  + V+T       R   +  N Q
Sbjct: 61  LSYVIDQGTPLDLTQGPVEPDGNPMHVALRGDAFLAVQTPQGVRYTRNGAFELNAQ 116



 Score = 35.6 bits (80), Expect = 2.1,   Method: Composition-based stats.
 Identities = 19/102 (18%), Positives = 29/102 (28%), Gaps = 6/102 (5%)

Query: 29  IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASG 88
           IA   T     G     R           S G     +    +         H      G
Sbjct: 145 IAPDGTVSTNLGIRGRLRLVTFANPQALKSEG---ANLFSSDAPARAAGPGQHL---EPG 198

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            ++  NV  +VE   + + NR Y      I +  D+  T + 
Sbjct: 199 ALERSNVKPVVEMTRLMDVNRTYTMVSSVISRLDDLRGTAIR 240


>gi|149191159|ref|ZP_01869417.1| putative flagellar hook-associated protein [Vibrio shilonii AK1]
 gi|148834997|gb|EDL51976.1| putative flagellar hook-associated protein [Vibrio shilonii AK1]
          Length = 459

 Score = 39.5 bits (90), Expect = 0.15,   Method: Composition-based stats.
 Identities = 20/120 (16%), Positives = 33/120 (27%), Gaps = 3/120 (2%)

Query: 13  SGLAVQSARMQIISENIANARTTGDTP--GSDPYRRKTISFEEVMHGSGGVRVK-KIGVD 69
           S ++ Q       +    N     D       P    ++  +       G+     I   
Sbjct: 337 SAISAQELAFSSSATLSGNGDVLKDLSMLSQTPLTNGSVVGKTPYSAYSGLLGDIGIFTR 396

Query: 70  QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
           Q+                       VN   E A+M      Y AN++ I  ++ M  T L
Sbjct: 397 QAESEATAAQISVEDAQVARDSVSAVNSDEEAANMLLYLNAYEANMKVISTANQMFQTLL 456


>gi|323490138|ref|ZP_08095358.1| flagellar basal-body rod protein [Planococcus donghaensis MPA1U2]
 gi|323396186|gb|EGA89012.1| flagellar basal-body rod protein [Planococcus donghaensis MPA1U2]
          Length = 278

 Score = 39.5 bits (90), Expect = 0.15,   Method: Composition-based stats.
 Identities = 12/50 (24%), Positives = 22/50 (44%), Gaps = 1/50 (2%)

Query: 85  NASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD-LLR 133
              G V+  NV++     DM  T R + +N + I+     M   ++ + R
Sbjct: 228 MKQGFVEQSNVDLTKTMTDMMTTYRGFESNQKVIQAYDRSMEKAVNEIGR 277



 Score = 36.4 bits (82), Expect = 1.5,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 21/43 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR 46
          +    + A SG+   + + QI++ N++NA T G       +R 
Sbjct: 1  MFRGLYTATSGMMANNRQQQILTNNLSNANTPGFKEDQTVFRA 43


>gi|313903612|ref|ZP_07837002.1| flagellar hook-associated protein FlgK [Thermaerobacter
          subterraneus DSM 13965]
 gi|313466165|gb|EFR61689.1| flagellar hook-associated protein FlgK [Thermaerobacter
          subterraneus DSM 13965]
          Length = 533

 Score = 39.5 bits (90), Expect = 0.15,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 23/73 (31%), Gaps = 7/73 (9%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDT-------PGSDPYRRKTISFEE 53
          M        +A  GL  Q   + +   NIANA T G +       P             E
Sbjct: 1  MRSTFFGLELARLGLWAQQRALDVTGHNIANANTPGYSRQVARLAPTPAYAPPSRAMAVE 60

Query: 54 VMHGSGGVRVKKI 66
                GV+V  I
Sbjct: 61 AGQVGTGVQVAGI 73



 Score = 34.1 bits (76), Expect = 7.2,   Method: Composition-based stats.
 Identities = 16/132 (12%), Positives = 36/132 (27%), Gaps = 13/132 (9%)

Query: 12  NSGLAVQSARMQIISE---NIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR------ 62
            +G  +Q+  +    +   N+A A   G                  +   GG        
Sbjct: 395 GTGTDLQAVVVNPALDDPANLAAALEAGAPGDGRNALALAQLRHAALALPGGAPAQDYLE 454

Query: 63  --VKKIGVDQSTFVEEFDPGHPVANASGIVKYP--NVNVLVETADMRETNRLYMANLQTI 118
             V  +G+      E       + +     +     V++  E   +      Y A  + +
Sbjct: 455 SVVAGLGIAGRQAQEGQRTTQLLMDQVAAQRESVRGVSLDEEMTQLVRYQHAYAAAARLV 514

Query: 119 KQSHDMMTTTLD 130
                M+   ++
Sbjct: 515 TAVDSMLAVLIE 526


>gi|228958018|ref|ZP_04119754.1| Flagellar hook-associated protein FlgK [Bacillus thuringiensis
           serovar pakistani str. T13001]
 gi|228801643|gb|EEM48524.1| Flagellar hook-associated protein FlgK [Bacillus thuringiensis
           serovar pakistani str. T13001]
          Length = 432

 Score = 39.5 bits (90), Expect = 0.15,   Method: Composition-based stats.
 Identities = 14/110 (12%), Positives = 34/110 (30%), Gaps = 12/110 (10%)

Query: 25  ISENIANARTTGDTPGSDPYRRK-TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPV 83
            + N+A     G   G    +             S     + I  D    +++       
Sbjct: 334 TANNLAAITDKGYKDGLTYKQALDQFLVGVASDKSSVNAYQNIHKDLLEGIQQEKMS--- 390

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
                      VN+  E  ++    + ++AN + I   +++  +   ++R
Sbjct: 391 --------IEGVNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSLFSIIR 432



 Score = 37.2 bits (84), Expect = 0.82,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 30/91 (32%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
          +   SG+      +Q   +N++N  T G       Y     S         G  V+ +GV
Sbjct: 7  NTPLSGMLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGSAGGSKGYAPEQRIGYGVQTLGV 66

Query: 69 DQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
          D+ T   +    +   +      Y N  +  
Sbjct: 67 DRITDEVKTKQYNDQMSQFSYYAYMNSTLSR 97


>gi|218700420|ref|YP_002408049.1| flagellar basal body rod protein FlgF [Escherichia coli IAI39]
 gi|300938642|ref|ZP_07153371.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 21-1]
 gi|218370406|emb|CAR18213.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli IAI39]
 gi|300456427|gb|EFK19920.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 21-1]
          Length = 251

 Score = 39.5 bits (90), Expect = 0.15,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 32/102 (31%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           N     +T       +   +    +        +     Q+T          +   SG++
Sbjct: 147 NPGDPANTVAPVGRLKLVKATGSEVQRGDDGIFRLSAESQATRGPVLQADPTLRVMSGVL 206

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NVN +   +DM  + R +   ++ I    D       LL
Sbjct: 207 EGSNVNAVAAMSDMIASARRFEMQMKVISSVDDNAGRANQLL 248


>gi|107023952|ref|YP_622279.1| flagellar basal body rod protein FlgF [Burkholderia cenocepacia AU
           1054]
 gi|116691039|ref|YP_836662.1| flagellar basal body rod protein FlgF [Burkholderia cenocepacia
           HI2424]
 gi|170734373|ref|YP_001766320.1| flagellar basal body rod protein FlgF [Burkholderia cenocepacia
           MC0-3]
 gi|254246966|ref|ZP_04940287.1| Flagellar basal body rod protein [Burkholderia cenocepacia PC184]
 gi|105894141|gb|ABF77306.1| Flagellar basal-body rod FlgF [Burkholderia cenocepacia AU 1054]
 gi|116649128|gb|ABK09769.1| flagellar basal-body rod protein FlgF [Burkholderia cenocepacia
           HI2424]
 gi|124871742|gb|EAY63458.1| Flagellar basal body rod protein [Burkholderia cenocepacia PC184]
 gi|169817615|gb|ACA92198.1| flagellar basal-body rod protein FlgF [Burkholderia cenocepacia
           MC0-3]
          Length = 252

 Score = 39.5 bits (90), Expect = 0.15,   Method: Composition-based stats.
 Identities = 9/47 (19%), Positives = 17/47 (36%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
               ++  NVN +     M +  R +    + I+ +     T   LL
Sbjct: 203 TPNSLEGSNVNPVTAMVAMIDNARAFQLQSKLIQTADQNEQTANQLL 249


>gi|323190589|gb|EFZ75861.1| flagellar basal-body rod protein FlgF [Escherichia coli RN587/1]
          Length = 251

 Score = 39.5 bits (90), Expect = 0.15,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 32/102 (31%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           N     +T       +   +    +        +     Q+T          +   SG++
Sbjct: 147 NPGDPANTVAPVGRLKLVKATGSEVQRGDDGIFRLSAESQATRGPVLQADPTLRVLSGVL 206

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NVN +   +DM  + R +   ++ I    D       LL
Sbjct: 207 EGSNVNAVAAMSDMIASARRFEMQMKVISSVDDNAGRANQLL 248


>gi|262396029|ref|YP_003287882.1| flagellar hook-associated protein FlgK [Vibrio sp. Ex25]
 gi|262339623|gb|ACY53417.1| flagellar hook-associated protein FlgK [Vibrio sp. Ex25]
          Length = 457

 Score = 39.5 bits (90), Expect = 0.15,   Method: Composition-based stats.
 Identities = 18/95 (18%), Positives = 31/95 (32%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          +   +IA SGL      + + ++N+AN  T G +                +    GV V 
Sbjct: 1  MNLVNIALSGLGANRVALDVTAQNVANVNTVGYSRQQALMASVDDGKANRLSPGLGVEVT 60

Query: 65 KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
           I      F+ +         A       N++ L 
Sbjct: 61 SIRRVTDQFLIKQTWSTNSMAAYASGYTSNMSQLE 95


>gi|110641253|ref|YP_668983.1| flagellar basal body rod protein FlgF [Escherichia coli 536]
 gi|191172387|ref|ZP_03033928.1| flagellar basal-body rod protein FlgF [Escherichia coli F11]
 gi|300982620|ref|ZP_07176204.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 200-1]
 gi|110342845|gb|ABG69082.1| flagellar basal-body rod protein FlgF [Escherichia coli 536]
 gi|190907271|gb|EDV66869.1| flagellar basal-body rod protein FlgF [Escherichia coli F11]
 gi|300307085|gb|EFJ61605.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 200-1]
 gi|324013351|gb|EGB82570.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 60-1]
          Length = 251

 Score = 39.5 bits (90), Expect = 0.15,   Method: Composition-based stats.
 Identities = 15/102 (14%), Positives = 31/102 (30%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           N     +T       +   +    +        +     Q+           +   SG++
Sbjct: 147 NPGDPANTVAPVGRLKLVKATGSEVQRGDDGIFRLSAESQARRGPVLQADPTLRVMSGVL 206

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NVN +   +DM  + R +   ++ I    D       LL
Sbjct: 207 EGSNVNAVAAMSDMIASARRFEMQMKVISSVDDNAGRANQLL 248


>gi|304412502|ref|ZP_07394108.1| flagellar hook-associated protein FlgK [Shewanella baltica OS183]
 gi|307307161|ref|ZP_07586899.1| flagellar hook-associated protein FlgK [Shewanella baltica BA175]
 gi|304349144|gb|EFM13556.1| flagellar hook-associated protein FlgK [Shewanella baltica OS183]
 gi|306910400|gb|EFN40831.1| flagellar hook-associated protein FlgK [Shewanella baltica BA175]
          Length = 457

 Score = 39.5 bits (90), Expect = 0.16,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 16/38 (42%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             VN   E  ++    + YMAN + I  +  +  T L 
Sbjct: 418 SGVNPDEEGINLIIYQQSYMANAKVISTADQLFQTMLS 455


>gi|284007174|emb|CBA72458.1| flagellar basal body rod protein FlgF [Arsenophonus nasoniae]
          Length = 248

 Score = 39.5 bits (90), Expect = 0.16,   Method: Composition-based stats.
 Identities = 13/61 (21%), Positives = 23/61 (37%)

Query: 72  TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
              +     + V   SG+++  NVN      DM    R +   ++ I  ++D       L
Sbjct: 185 PNAQPLVMDNSVKLLSGVLEGSNVNPAQAMVDMIANARTFEMQMKVIHSANDNAQRANQL 244

Query: 132 L 132
           L
Sbjct: 245 L 245


>gi|258404726|ref|YP_003197468.1| fagellar hook-basal body protein [Desulfohalobium retbaense DSM
           5692]
 gi|257796953|gb|ACV67890.1| fagellar hook-basal body protein [Desulfohalobium retbaense DSM
           5692]
          Length = 243

 Score = 39.5 bits (90), Expect = 0.16,   Method: Composition-based stats.
 Identities = 8/44 (18%), Positives = 20/44 (45%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  NV+ +  T ++ +  R + +  + IK    +   T  + R
Sbjct: 198 LESSNVSAIEMTTELIQAERGFQSFQKAIKAYDTVAQKTNTVGR 241



 Score = 38.3 bits (87), Expect = 0.39,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 27/63 (42%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            + +      SG A++  R+Q++S N+AN    G       +  +  + +    G G  
Sbjct: 1  MPIFSGLAAPLSGAALERTRLQVLSNNLANIDNAGFKQDRLLFETQLDNAQAGRTGEGTS 60

Query: 62 RVK 64
          R++
Sbjct: 61 RLQ 63


>gi|215486286|ref|YP_002328717.1| flagellar basal body rod protein FlgF [Escherichia coli O127:H6
           str. E2348/69]
 gi|306814074|ref|ZP_07448247.1| flagellar basal body rod protein FlgF [Escherichia coli NC101]
 gi|312968849|ref|ZP_07783056.1| flagellar basal-body rod protein FlgF [Escherichia coli 2362-75]
 gi|331657139|ref|ZP_08358101.1| flagellar basal-body rod protein FlgF [Escherichia coli TA206]
 gi|215264358|emb|CAS08715.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli O127:H6 str. E2348/69]
 gi|305852711|gb|EFM53159.1| flagellar basal body rod protein FlgF [Escherichia coli NC101]
 gi|312286251|gb|EFR14164.1| flagellar basal-body rod protein FlgF [Escherichia coli 2362-75]
 gi|331055387|gb|EGI27396.1| flagellar basal-body rod protein FlgF [Escherichia coli TA206]
          Length = 251

 Score = 39.5 bits (90), Expect = 0.16,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 32/102 (31%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           N     +T       +   +    +        +     Q+T          +   SG++
Sbjct: 147 NPGDPANTVAPVGRLKLVKATGSEVQRGDDGIFRLSAESQATRGPVLLADPTLRVMSGVL 206

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NVN +   +DM  + R +   ++ I    D       LL
Sbjct: 207 EGSNVNAVAAMSDMIASARRFEMQMKVISSVDDNAGRANQLL 248


>gi|153831692|ref|ZP_01984359.1| flagellar hook-associated protein FlgK [Vibrio harveyi HY01]
 gi|148872202|gb|EDL71019.1| flagellar hook-associated protein FlgK [Vibrio harveyi HY01]
          Length = 457

 Score = 39.5 bits (90), Expect = 0.16,   Method: Composition-based stats.
 Identities = 15/69 (21%), Positives = 24/69 (34%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          +   +IA SGL      + + ++N+AN  T G +                +    GV V 
Sbjct: 1  MNLVNIALSGLNANRVALDVTAQNVANINTPGYSRQQALTASVGDGKYNKLSPGMGVEVT 60

Query: 65 KIGVDQSTF 73
           I      F
Sbjct: 61 SIRRVTDQF 69


>gi|20807892|ref|NP_623063.1| flagellar basal body protein [Thermoanaerobacter tengcongensis MB4]
 gi|20516457|gb|AAM24667.1| Flagellar basal body protein [Thermoanaerobacter tengcongensis MB4]
          Length = 131

 Score = 39.5 bits (90), Expect = 0.16,   Method: Composition-based stats.
 Identities = 20/131 (15%), Positives = 44/131 (33%), Gaps = 1/131 (0%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +  +  +   GL   + R  +I+ NIAN  T         +              G +  
Sbjct: 1   MWENIDLLAKGLYAATVRSNVIANNIANVDTPNFKRSEVKFEEILQEALNGNKLKGYITH 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGI-VKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
            +        ++   P     N + + +   NV++  E + + +    Y A +Q +    
Sbjct: 61  PRHIPIGPPPIDSIKPEIYQVNTTSMRLDGNNVDIDYEMSQLAKNQLYYYALVQRVSGEL 120

Query: 123 DMMTTTLDLLR 133
           + + T +   R
Sbjct: 121 NSIMTAVKDGR 131


>gi|239817164|ref|YP_002946074.1| flagellar basal body rod protein FlgF [Variovorax paradoxus S110]
 gi|239803741|gb|ACS20808.1| flagellar basal-body rod protein FlgF [Variovorax paradoxus S110]
          Length = 248

 Score = 39.5 bits (90), Expect = 0.16,   Method: Composition-based stats.
 Identities = 16/105 (15%), Positives = 35/105 (33%), Gaps = 2/105 (1%)

Query: 30  ANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV--DQSTFVEEFDPGHPVANAS 87
           AN   T    G        +   ++++      V+           +   +P   V   +
Sbjct: 141 ANGLVTARGAGDPAIGIAEVGRLKLVNPPVADLVRGADGLFRMREGLAPAEPDAAVTVTT 200

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           G V+  NVN +     M    R +   ++++  + +   +   LL
Sbjct: 201 GAVEGSNVNGVEAMVAMIANARSFEMQMKSMHSADENAQSANKLL 245


>gi|59712475|ref|YP_205251.1| flagellar hook-associated protein FlgK [Vibrio fischeri ES114]
 gi|59480576|gb|AAW86363.1| flagellar hook-associated protein 1, FlgK [Vibrio fischeri ES114]
          Length = 626

 Score = 39.5 bits (90), Expect = 0.16,   Method: Composition-based stats.
 Identities = 17/118 (14%), Positives = 30/118 (25%), Gaps = 1/118 (0%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFV 74
           L  Q   +   S NI N  T G +  S         +    +   GV V  +      F 
Sbjct: 14  LTAQRQ-LNTTSHNINNVNTEGFSRQSVVQDTNMPHWVSGANLGAGVHVAAVRRSFDQFA 72

Query: 75  EEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
                         +    N++VL          R+             +  +  ++ 
Sbjct: 73  TNELNLSTTNLNYSMDTEANLDVLTNMMSSIGAKRIPENINDWFDAVKTLADSPNEIG 130



 Score = 35.2 bits (79), Expect = 3.4,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 21/39 (53%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN+  E A+M +  + YMA+ + +K + +   + L L
Sbjct: 587 SGVNLDEEAANMMKFQQAYMASSRIMKAADETFNSILQL 625


>gi|196249402|ref|ZP_03148100.1| flagellar hook-associated protein FlgK [Geobacillus sp. G11MC16]
 gi|196211159|gb|EDY05920.1| flagellar hook-associated protein FlgK [Geobacillus sp. G11MC16]
          Length = 528

 Score = 39.5 bits (90), Expect = 0.16,   Method: Composition-based stats.
 Identities = 12/104 (11%), Positives = 31/104 (29%)

Query: 27  ENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANA 86
            N   +   G +           S     +  G +    +  +Q+  ++        +  
Sbjct: 418 SNTTVSLQDGISVDLASLGLPLTSGTIETNYQGWIGQLGVAGEQANRMKSNSETLRQSVE 477

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
                   V++  E  +M +    Y A  + I    +M+   ++
Sbjct: 478 ERRQSVSAVSLDEEMMNMIKFQHAYNAAARQITAIDEMLDKIIN 521



 Score = 37.2 bits (84), Expect = 0.80,   Method: Composition-based stats.
 Identities = 15/79 (18%), Positives = 23/79 (29%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M         A   +  Q A +     NIANA T G T         T      ++    
Sbjct: 1  MLSTFHGLEAARRAMMAQQAALYTTGHNIANANTEGYTRQRVQLEATTPFPTPGLNRPNI 60

Query: 61 VRVKKIGVDQSTFVEEFDP 79
                GV+ ++     + 
Sbjct: 61 PGQMGTGVEAASVERVREY 79


>gi|86750925|ref|YP_487421.1| flagellar hook-associated protein [Rhodopseudomonas palustris HaA2]
 gi|86573953|gb|ABD08510.1| Flagellar hook-associated protein [Rhodopseudomonas palustris HaA2]
          Length = 623

 Score = 39.5 bits (90), Expect = 0.16,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 15/45 (33%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
                    VN+  E A +      Y AN + +   + M  T + 
Sbjct: 577 QQKYATNSGVNMDEEMAHLLSLQNAYSANARVMSTVNQMYQTLMQ 621



 Score = 33.7 bits (75), Expect = 7.9,   Method: Composition-based stats.
 Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 7/67 (10%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            L  +  IA +GL    A M ++S N+ANA T G       Y RKT++    + G  G 
Sbjct: 1  MSLGDALSIAMAGLRANQASMSLVSSNVANAETPG-------YVRKTVNQVTTLSGPSGS 53

Query: 62 RVKKIGV 68
           V   GV
Sbjct: 54 GVSITGV 60


>gi|323947621|gb|EGB43625.1| flagellar basal-body rod protein FlgF [Escherichia coli H120]
          Length = 251

 Score = 39.5 bits (90), Expect = 0.16,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 33/102 (32%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           N     +T       +   +    +        +     Q+T          ++  SG++
Sbjct: 147 NPGDPANTVAPVGRLKLVKATGSEVQRGDDGIFRLSAESQATRGPILQADPTLSVMSGVL 206

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NVN +   +DM  + R +   ++ I    D       LL
Sbjct: 207 EGSNVNAVAAMSDMIASARRFEMQMKVISSVDDNAGRANQLL 248


>gi|313497768|gb|ADR59134.1| FlgK [Pseudomonas putida BIRD-1]
          Length = 680

 Score = 39.5 bits (90), Expect = 0.16,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 24/68 (35%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          + +   I  SGL+   A + + S NIANA T+G +                     G  +
Sbjct: 1  MSSLISIGLSGLSASQAALSVTSNNIANAATSGYSRQQTVQAAGPSHNIGAGFLGTGTTL 60

Query: 64 KKIGVDQS 71
            +    S
Sbjct: 61 ADVRRIYS 68


>gi|258625228|ref|ZP_05720140.1| putative flagellar hook-associated protein 1 [Vibrio mimicus
          VM603]
 gi|258582475|gb|EEW07312.1| putative flagellar hook-associated protein 1 [Vibrio mimicus
          VM603]
          Length = 457

 Score = 39.5 bits (90), Expect = 0.16,   Method: Composition-based stats.
 Identities = 15/69 (21%), Positives = 24/69 (34%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          +   +IA SGL      + + ++N+AN  T G +              E      GV V 
Sbjct: 1  MNIVNIALSGLNANRVALDVTAQNVANINTPGFSRQQAIMTSVGGGKYEKHSPGMGVEVS 60

Query: 65 KIGVDQSTF 73
           +      F
Sbjct: 61 SVRRITDQF 69



 Score = 36.0 bits (81), Expect = 1.8,   Method: Composition-based stats.
 Identities = 16/83 (19%), Positives = 27/83 (32%), Gaps = 2/83 (2%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
           IS  +      G    K     S +            +   V    VN   E A++    
Sbjct: 376 ISINDAFTSMVGETAIKARQADSDYQTRASMNQQAIESRNNV--SAVNSDEEAANLMTFA 433

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
             Y AN++ I  ++ +  + L L
Sbjct: 434 NAYNANMKVISTANQLFDSVLQL 456


>gi|229189835|ref|ZP_04316846.1| Flagellar hook-associated protein FlgK [Bacillus cereus ATCC 10876]
 gi|228593643|gb|EEK51451.1| Flagellar hook-associated protein FlgK [Bacillus cereus ATCC 10876]
          Length = 432

 Score = 39.5 bits (90), Expect = 0.16,   Method: Composition-based stats.
 Identities = 14/110 (12%), Positives = 34/110 (30%), Gaps = 12/110 (10%)

Query: 25  ISENIANARTTGDTPGSDPYRRK-TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPV 83
            + N+A     G   G    +             S     + I  D    +++       
Sbjct: 334 TANNLAAITDKGYKDGLTYKQALDQFLVGVASDKSSVNAYQNIHKDLLEGIQQEKMS--- 390

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
                      VN+  E  ++    + ++AN + I   +++  +   ++R
Sbjct: 391 --------IEGVNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSLFSIIR 432



 Score = 37.2 bits (84), Expect = 0.82,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 30/91 (32%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
          +   SG+      +Q   +N++N  T G       Y     S         G  V+ +GV
Sbjct: 7  NTPLSGMLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGSAGGSKGYAPEQRIGYGVQTLGV 66

Query: 69 DQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
          D+ T   +    +   +      Y N  +  
Sbjct: 67 DRITDEVKTKQYNDQMSQFSYYAYMNSTLSR 97


>gi|30019783|ref|NP_831414.1| flagellar hook-associated protein FlgK [Bacillus cereus ATCC 14579]
 gi|229127064|ref|ZP_04256063.1| Flagellar hook-associated protein FlgK [Bacillus cereus BDRD-Cer4]
 gi|29895328|gb|AAP08615.1| Flagellar hook-associated protein 1 [Bacillus cereus ATCC 14579]
 gi|228656417|gb|EEL12256.1| Flagellar hook-associated protein FlgK [Bacillus cereus BDRD-Cer4]
          Length = 432

 Score = 39.5 bits (90), Expect = 0.16,   Method: Composition-based stats.
 Identities = 14/110 (12%), Positives = 34/110 (30%), Gaps = 12/110 (10%)

Query: 25  ISENIANARTTGDTPGSDPYRRK-TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPV 83
            + N+A     G   G    +             S     + I  D    +++       
Sbjct: 334 TANNLAAITDKGYKDGLTYKQALDQFLVGVASDKSSVNAYQNIHKDLLEGIQQEKMS--- 390

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
                      VN+  E  ++    + ++AN + I   +++  +   ++R
Sbjct: 391 --------IEGVNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSLFSIIR 432



 Score = 36.8 bits (83), Expect = 0.90,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 30/91 (32%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
          +   SG+      +Q   +N++N  T G       Y     S         G  V+ +GV
Sbjct: 7  NTPLSGMLAAQMGLQTTKQNLSNIHTPGYVRQMVNYESAGGSKGYAPEQRIGYGVQTLGV 66

Query: 69 DQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
          D+ T   +    +   +      Y N  +  
Sbjct: 67 DRITDEVKTKQYNDQMSQFSYYAYMNSTLSR 97


>gi|50120640|ref|YP_049807.1| flagellar basal body rod protein FlgF [Pectobacterium atrosepticum
           SCRI1043]
 gi|49611166|emb|CAG74612.1| flagellar basal-body rod protein [Pectobacterium atrosepticum
           SCRI1043]
          Length = 251

 Score = 39.5 bits (90), Expect = 0.16,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 30/102 (29%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           NA    +T       +   +  + +  S     +     Q            V    G++
Sbjct: 147 NAGDPPNTIAQLGRLKLVKATGQEVERSDDGLFRLTQQAQQQRGNVLQNDPTVRIMPGVI 206

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NVN +    DM    R +   ++ I    D       +L
Sbjct: 207 EGSNVNTVDTMVDMIANARRFEMQMKVISSVDDNAQRANQIL 248


>gi|291520177|emb|CBK75398.1| flagellar hook-associated protein FlgK [Butyrivibrio fibrisolvens
          16/4]
          Length = 494

 Score = 39.5 bits (90), Expect = 0.16,   Method: Composition-based stats.
 Identities = 13/38 (34%), Positives = 18/38 (47%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDT 38
          M        IA SGL    A++   + NI+N  TTG +
Sbjct: 1  MSSTFFGLTIAASGLNTAQAQINTTANNISNVNTTGYS 38


>gi|229144350|ref|ZP_04272756.1| Flagellar hook-associated protein FlgK [Bacillus cereus BDRD-ST24]
 gi|296502338|ref|YP_003664038.1| flagellar hook-associated protein FlgK [Bacillus thuringiensis
           BMB171]
 gi|228639137|gb|EEK95561.1| Flagellar hook-associated protein FlgK [Bacillus cereus BDRD-ST24]
 gi|296323390|gb|ADH06318.1| flagellar hook-associated protein FlgK [Bacillus thuringiensis
           BMB171]
          Length = 432

 Score = 39.5 bits (90), Expect = 0.16,   Method: Composition-based stats.
 Identities = 14/110 (12%), Positives = 34/110 (30%), Gaps = 12/110 (10%)

Query: 25  ISENIANARTTGDTPGSDPYRRK-TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPV 83
            + N+A     G   G    +             S     + I  D    +++       
Sbjct: 334 TANNLAAITDKGYKDGLTYKQALDQFLVGVASDKSSVNAYQNIHKDLLEGIQQEKMS--- 390

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
                      VN+  E  ++    + ++AN + I   +++  +   ++R
Sbjct: 391 --------IEGVNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSLFSIIR 432



 Score = 37.2 bits (84), Expect = 0.89,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 30/91 (32%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
          +   SG+      +Q   +N++N  T G       Y     S         G  V+ +GV
Sbjct: 7  NTPLSGMLAAQMGLQTTKQNLSNIHTPGYVRQMVNYESAGGSKGYAPEQRIGYGVQTLGV 66

Query: 69 DQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
          D+ T   +    +   +      Y N  +  
Sbjct: 67 DRITDEVKTKQYNDQMSQFSYYAYMNSTLSR 97


>gi|85706168|ref|ZP_01037263.1| flagellar basal-body rod protein FlgF [Roseovarius sp. 217]
 gi|85669332|gb|EAQ24198.1| flagellar basal-body rod protein FlgF [Roseovarius sp. 217]
          Length = 237

 Score = 39.5 bits (90), Expect = 0.16,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 23/54 (42%)

Query: 77  FDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           F+P        G ++  NV+ + + A M E  R Y      +   ++ + T LD
Sbjct: 180 FEPVEDGRVLQGFLEGANVDPIGQIARMIEVQRAYEMGQSFLDSENERVMTALD 233


>gi|254227989|ref|ZP_04921419.1| flagellar hook-associated protein FlgK [Vibrio sp. Ex25]
 gi|151939485|gb|EDN58313.1| flagellar hook-associated protein FlgK [Vibrio sp. Ex25]
          Length = 457

 Score = 39.5 bits (90), Expect = 0.16,   Method: Composition-based stats.
 Identities = 18/95 (18%), Positives = 31/95 (32%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          +   +IA SGL      + + ++N+AN  T G +                +    GV V 
Sbjct: 1  MNLVNIALSGLGANRVALDVTAQNVANVNTVGYSRQQALMASVDDGKANRLSPGLGVEVT 60

Query: 65 KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
           I      F+ +         A       N++ L 
Sbjct: 61 SIRRVTDQFLIKQTWSTNSMAAYASGYTSNMSQLE 95


>gi|331007438|ref|ZP_08330615.1| Flagellar basal-body rod protein flgF [gamma proteobacterium
           IMCC1989]
 gi|330418745|gb|EGG93234.1| Flagellar basal-body rod protein flgF [gamma proteobacterium
           IMCC1989]
          Length = 246

 Score = 39.5 bits (90), Expect = 0.16,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 23/47 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG ++  NVN + E   +    R Y  +++ +K + +    +  LL+
Sbjct: 197 SGFLEGSNVNPVNELTHILTLARQYEMSIKLMKTTEENSQASARLLQ 243


>gi|300918679|ref|ZP_07135260.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 115-1]
 gi|300414173|gb|EFJ97483.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 115-1]
          Length = 251

 Score = 39.5 bits (90), Expect = 0.16,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 32/102 (31%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           N     +T       +   +    +        +     Q+T          +   SG++
Sbjct: 147 NPGDPANTVAPVGRLKLVKATGSEVQRGDDGIFRLSAETQATRGPVLQADPTLRVMSGVL 206

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NVN +   +DM  + R +   ++ I    D       LL
Sbjct: 207 EGSNVNAVAAMSDMIASARRFEMQMKVISSVDDNAGRANQLL 248


>gi|209964689|ref|YP_002297604.1| flagellar basal-body rod protein FlgF [Rhodospirillum centenum SW]
 gi|209958155|gb|ACI98791.1| flagellar basal-body rod protein FlgF [Rhodospirillum centenum SW]
          Length = 240

 Score = 39.5 bits (90), Expect = 0.16,   Method: Composition-based stats.
 Identities = 18/87 (20%), Positives = 37/87 (42%), Gaps = 1/87 (1%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
            ++  +V+      +++++G    +  +E  P        G ++  NV  +VET  M + 
Sbjct: 152 PLARLKVVSFDDEQKMQELGGGLYSTEQEERPVEKPEVTQGALEGSNVQPIVETTQMIDV 211

Query: 108 NRLYMANLQTIKQSHDMMTTTL-DLLR 133
            R Y    + I   H+ + T +  L R
Sbjct: 212 LRAYQNTQRMIDSEHERLRTAIRQLGR 238


>gi|16129040|ref|NP_415595.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli str. K-12 substr. MG1655]
 gi|89107923|ref|AP_001703.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli str. K-12 substr. W3110]
 gi|110805094|ref|YP_688614.1| flagellar basal body rod protein FlgF [Shigella flexneri 5 str.
           8401]
 gi|170080728|ref|YP_001730048.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli str. K-12 substr. DH10B]
 gi|188495735|ref|ZP_03003005.1| flagellar basal-body rod protein FlgF [Escherichia coli 53638]
 gi|194438118|ref|ZP_03070211.1| flagellar basal-body rod protein FlgF [Escherichia coli 101-1]
 gi|209918331|ref|YP_002292415.1| flagellar basal body rod protein FlgF [Escherichia coli SE11]
 gi|218694611|ref|YP_002402278.1| flagellar basal body rod protein FlgF [Escherichia coli 55989]
 gi|238900331|ref|YP_002926127.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli BW2952]
 gi|253773899|ref|YP_003036730.1| flagellar basal body rod protein FlgF [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254161183|ref|YP_003044291.1| flagellar basal body rod protein FlgF [Escherichia coli B str.
           REL606]
 gi|256023225|ref|ZP_05437090.1| flagellar basal body rod protein FlgF [Escherichia sp. 4_1_40B]
 gi|297517865|ref|ZP_06936251.1| flagellar basal body rod protein FlgF [Escherichia coli OP50]
 gi|300821142|ref|ZP_07101291.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 119-7]
 gi|300902468|ref|ZP_07120450.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 84-1]
 gi|300950172|ref|ZP_07164117.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 116-1]
 gi|301029708|ref|ZP_07192762.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 196-1]
 gi|301304984|ref|ZP_07211086.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 124-1]
 gi|301644989|ref|ZP_07244955.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 146-1]
 gi|307137712|ref|ZP_07497068.1| flagellar basal body rod protein FlgF [Escherichia coli H736]
 gi|331641621|ref|ZP_08342756.1| flagellar basal-body rod protein FlgF [Escherichia coli H736]
 gi|331667477|ref|ZP_08368341.1| flagellar basal-body rod protein FlgF [Escherichia coli TA271]
 gi|331676868|ref|ZP_08377564.1| flagellar basal-body rod protein FlgF [Escherichia coli H591]
 gi|2494531|sp|P75938|FLGF_ECOLI RecName: Full=Flagellar basal-body rod protein flgF; AltName:
           Full=Putative proximal rod protein
 gi|1787317|gb|AAC74161.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli str. K-12 substr. MG1655]
 gi|4062655|dbj|BAA35886.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli str. K12 substr. W3110]
 gi|110614642|gb|ABF03309.1| flagellar basal-body rod protein FlgF [Shigella flexneri 5 str.
           8401]
 gi|169888563|gb|ACB02270.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli str. K-12 substr. DH10B]
 gi|188490934|gb|EDU66037.1| flagellar basal-body rod protein FlgF [Escherichia coli 53638]
 gi|194423054|gb|EDX39048.1| flagellar basal-body rod protein FlgF [Escherichia coli 101-1]
 gi|209911590|dbj|BAG76664.1| flagellar basal-body rod protein FlgF [Escherichia coli SE11]
 gi|218351343|emb|CAU97049.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli 55989]
 gi|238861103|gb|ACR63101.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli BW2952]
 gi|242376881|emb|CAQ31598.1| flagellar basal-body rod protein FlgF, subunit of Flagellar Motor
           Complex and Flagellum [Escherichia coli BL21(DE3)]
 gi|253324943|gb|ACT29545.1| flagellar basal-body rod protein FlgF [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253973084|gb|ACT38755.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli B str. REL606]
 gi|253977298|gb|ACT42968.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli BL21(DE3)]
 gi|260449783|gb|ACX40205.1| flagellar basal-body rod protein FlgF [Escherichia coli DH1]
 gi|299877396|gb|EFI85607.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 196-1]
 gi|300405500|gb|EFJ89038.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 84-1]
 gi|300450519|gb|EFK14139.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 116-1]
 gi|300526441|gb|EFK47510.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 119-7]
 gi|300839702|gb|EFK67462.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 124-1]
 gi|301076718|gb|EFK91524.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 146-1]
 gi|309701349|emb|CBJ00650.1| flagellar basal-body rod protein FlgF [Escherichia coli ETEC
           H10407]
 gi|315135709|dbj|BAJ42868.1| flagellar basal body rod protein FlgF [Escherichia coli DH1]
 gi|315253878|gb|EFU33846.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 85-1]
 gi|323937817|gb|EGB34081.1| flagellar basal-body rod protein FlgF [Escherichia coli E1520]
 gi|323942546|gb|EGB38713.1| flagellar basal-body rod protein FlgF [Escherichia coli E482]
 gi|323962676|gb|EGB58254.1| flagellar basal-body rod protein FlgF [Escherichia coli H489]
 gi|323973334|gb|EGB68523.1| flagellar basal-body rod protein FlgF [Escherichia coli TA007]
 gi|324017419|gb|EGB86638.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 117-3]
 gi|331038419|gb|EGI10639.1| flagellar basal-body rod protein FlgF [Escherichia coli H736]
 gi|331065062|gb|EGI36957.1| flagellar basal-body rod protein FlgF [Escherichia coli TA271]
 gi|331075557|gb|EGI46855.1| flagellar basal-body rod protein FlgF [Escherichia coli H591]
 gi|332342623|gb|AEE55957.1| flagellar basal-body rod protein FlgF [Escherichia coli UMNK88]
          Length = 251

 Score = 39.5 bits (90), Expect = 0.16,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 32/102 (31%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           N     +T       +   +    +        +     Q+T          +   SG++
Sbjct: 147 NPGDPANTVAPVGRLKLVKATGSEVQRGDDGIFRLSAETQATRGPVLQADPTLRVMSGVL 206

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NVN +   +DM  + R +   ++ I    D       LL
Sbjct: 207 EGSNVNAVAAMSDMIASARRFEMQMKVISSVDDNAGRANQLL 248


>gi|329895981|ref|ZP_08271239.1| Flagellar hook-associated protein flgK [gamma proteobacterium
           IMCC3088]
 gi|328922062|gb|EGG29425.1| Flagellar hook-associated protein flgK [gamma proteobacterium
           IMCC3088]
          Length = 1003

 Score = 39.5 bits (90), Expect = 0.17,   Method: Composition-based stats.
 Identities = 17/112 (15%), Positives = 30/112 (26%), Gaps = 3/112 (2%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +     I  S + V    +   S NI+N  T G +           +     +   G   
Sbjct: 1   MSDFLSIGASAINVYRQAIATTSNNISNVNTEGYSKQEVKITESYPTQIANYYLGTGAFT 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
             +      FVE           +     P +       D+  +    +AN 
Sbjct: 61  GSVQRSYDEFVERSLRDSASDLDAT---TPFIEYTQRIVDIMGSETSNLANA 109


>gi|209695756|ref|YP_002263686.1| flagellar hook-associated protein FlgK [Aliivibrio salmonicida
           LFI1238]
 gi|208009709|emb|CAQ80013.1| flagellar hook-associated protein type 3 FlgM [Aliivibrio
           salmonicida LFI1238]
          Length = 626

 Score = 39.5 bits (90), Expect = 0.17,   Method: Composition-based stats.
 Identities = 17/118 (14%), Positives = 30/118 (25%), Gaps = 1/118 (0%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFV 74
           L  Q   +   S NI N  T G +  S         +    +   GV V  +      F 
Sbjct: 14  LTAQRQ-LNTTSHNINNVNTEGFSRQSVVQETNMPHWVSGANLGAGVHVAAVRRSFDQFA 72

Query: 75  EEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
                         +    N++VL          R+             +  +  ++ 
Sbjct: 73  TNELNLSTTNLNYSMDTEANLDVLTNMMSSIGAKRIPENINDWFDAVKTLSDSPNEIG 130



 Score = 35.6 bits (80), Expect = 2.3,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 21/39 (53%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN+  E A+M +  + YMA+ + +K + +   T L L
Sbjct: 587 SGVNLDEEAANMMKFQQAYMASSRIMKAADETFNTILQL 625


>gi|157373206|ref|YP_001471806.1| flagellar basal-body rod protein FlgF [Shewanella sediminis
           HAW-EB3]
 gi|157315580|gb|ABV34678.1| flagellar basal-body rod protein FlgF [Shewanella sediminis
           HAW-EB3]
          Length = 244

 Score = 39.5 bits (90), Expect = 0.17,   Method: Composition-based stats.
 Identities = 10/49 (20%), Positives = 22/49 (44%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
            SG ++  NV  + E     + +R +   ++ +K +  +      LLR+
Sbjct: 195 DSGFLESSNVKAVSELIASMDLSRQFEVQVKLMKSAEKLAEAGNRLLRN 243


>gi|150019058|ref|YP_001311312.1| flagellar basal body rod protein FlgG [Clostridium beijerinckii
           NCIMB 8052]
 gi|149905523|gb|ABR36356.1| protein of unknown function DUF1078 domain protein [Clostridium
           beijerinckii NCIMB 8052]
          Length = 255

 Score = 39.5 bits (90), Expect = 0.17,   Method: Composition-based stats.
 Identities = 7/49 (14%), Positives = 22/49 (44%)

Query: 83  VANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
                G+++  NV+     +D+  T R +  + + +  + D+ +   ++
Sbjct: 206 YNIEQGMLEGSNVDAGETFSDIVLTQRAFQLSSKAVTTADDLWSMINNM 254


>gi|329890330|ref|ZP_08268673.1| flagellar hook-associated protein FlgK [Brevundimonas diminuta
          ATCC 11568]
 gi|328845631|gb|EGF95195.1| flagellar hook-associated protein FlgK [Brevundimonas diminuta
          ATCC 11568]
          Length = 735

 Score = 39.5 bits (90), Expect = 0.17,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 28/63 (44%), Gaps = 7/63 (11%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            L +  +IA SG+     +++++S+N++N  T G       Y RK    +       G 
Sbjct: 1  MSLNSIMNIATSGMNAAQTQLRVVSDNVSNVNTPG-------YVRKIADQQSWASQGVGA 53

Query: 62 RVK 64
           V+
Sbjct: 54 GVE 56



 Score = 34.1 bits (76), Expect = 7.5,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 20/44 (45%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           V    VN+  E   M    + + A+ + ++ + DM    L ++R
Sbjct: 692 VSVEGVNLDEELVLMTTYQQAFNASARMVQAAKDMYDILLGMVR 735


>gi|319650643|ref|ZP_08004783.1| flagellar hook-associated protein K [Bacillus sp. 2_A_57_CT2]
 gi|317397824|gb|EFV78522.1| flagellar hook-associated protein K [Bacillus sp. 2_A_57_CT2]
          Length = 518

 Score = 39.5 bits (90), Expect = 0.17,   Method: Composition-based stats.
 Identities = 7/38 (18%), Positives = 17/38 (44%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             V++  E  +M +    Y A+ + I    +M+   ++
Sbjct: 474 SAVSLDEEMTNMIKFQHAYNASARNITVVDEMLDKIIN 511



 Score = 34.8 bits (78), Expect = 4.1,   Method: Composition-based stats.
 Identities = 15/110 (13%), Positives = 30/110 (27%), Gaps = 7/110 (6%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDT------PGSDPYRRKTISFEEV 54
           M         A  G+  Q + +     NI+NA T G T        ++PY    ++  ++
Sbjct: 1   MRSTFMGLETARRGMFTQQSALYTTGHNISNANTPGYTRQRINFSQTEPYPGAGLNRPQI 60

Query: 55  MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP-NVNVLVETAD 103
               G                +                  ++  + E  +
Sbjct: 61  PGQMGTGVEAGSVQRIREGFLDMQYRTESTKMGYYGAMSESLTKMEEIMN 110


>gi|309798071|ref|ZP_07692446.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 145-7]
 gi|308118354|gb|EFO55616.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 145-7]
          Length = 251

 Score = 39.5 bits (90), Expect = 0.17,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 32/102 (31%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           N     +T       +   +    +        +     Q+T          +   SG++
Sbjct: 147 NPGDPANTVAPVGRLKLVKATGSEVQRGDDGIFRLSAESQATRGPILQADPTLRVMSGVL 206

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NVN +   +DM  + R +   ++ I    D       LL
Sbjct: 207 EGSNVNAVAAMSDMIASARRFEMQMKVISSVDDNAGRANQLL 248


>gi|229043492|ref|ZP_04191202.1| Flagellar hook-associated protein FlgK [Bacillus cereus AH676]
 gi|228725870|gb|EEL77117.1| Flagellar hook-associated protein FlgK [Bacillus cereus AH676]
          Length = 432

 Score = 39.5 bits (90), Expect = 0.17,   Method: Composition-based stats.
 Identities = 14/110 (12%), Positives = 34/110 (30%), Gaps = 12/110 (10%)

Query: 25  ISENIANARTTGDTPGSDPYRRK-TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPV 83
            + N+A     G   G    +             S     + I  D    +++       
Sbjct: 334 TANNLAAITDKGYKDGLTYKQALDQFLVGVASDKSSVNAYQNIHKDLLEGIQQEKMS--- 390

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
                      VN+  E  ++    + ++AN + I   +++  +   ++R
Sbjct: 391 --------IEGVNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSLFSIIR 432



 Score = 37.2 bits (84), Expect = 0.90,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 30/91 (32%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
          +   SG+      +Q   +N++N  T G       Y     S         G  V+ +GV
Sbjct: 7  NTPLSGMLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGSAGGSKGYAPEQRIGYGVQTLGV 66

Query: 69 DQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
          D+ T   +    +   +      Y N  +  
Sbjct: 67 DRITDEVKTKQYNDQMSQFSYYAYMNSTLSR 97


>gi|217976222|ref|YP_002360369.1| flagellar basal body rod protein FlgB [Methylocella silvestris BL2]
 gi|217501598|gb|ACK49007.1| flagellar basal body rod protein FlgB [Methylocella silvestris BL2]
          Length = 126

 Score = 39.5 bits (90), Expect = 0.17,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 36/111 (32%), Gaps = 4/111 (3%)

Query: 19  SARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFD 78
           + R  +I+ N+ANA T G T           +   +   +       I         +  
Sbjct: 18  TVRQSVIAANVANANTPGFTASDVTPFEDVFNDASIRLAATDPGHIGID----PLASDQV 73

Query: 79  PGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
                A         +V++  E     E NR +  N   +K  + M+  ++
Sbjct: 74  SVKDGAAWETTHSGNSVSLENEMMKAGEVNRSFSLNSSIVKSFNQMLMASV 124


>gi|91794994|ref|YP_564645.1| flagellar basal-body rod FlgF [Shewanella denitrificans OS217]
 gi|91716996|gb|ABE56922.1| Flagellar basal-body rod FlgF [Shewanella denitrificans OS217]
          Length = 244

 Score = 39.5 bits (90), Expect = 0.17,   Method: Composition-based stats.
 Identities = 10/59 (16%), Positives = 23/59 (38%)

Query: 76  EFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
                  V   SG ++  NV  + E     + +R +   ++ +K +  +      L+R+
Sbjct: 185 VLAADDGVQVDSGYLESSNVQAVSELIASMDLSRQFEIQVKLMKSAEKLAEAGNRLIRN 243


>gi|26991070|ref|NP_746495.1| flagellar hook-associated protein FlgK [Pseudomonas putida
          KT2440]
 gi|24986104|gb|AAN69959.1|AE016634_8 flagellar hook-associated protein FlgK [Pseudomonas putida
          KT2440]
          Length = 680

 Score = 39.5 bits (90), Expect = 0.17,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 24/68 (35%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          + +   I  SGL+   A + + S NIANA T+G +                     G  +
Sbjct: 1  MSSLISIGLSGLSASQAALSVTSNNIANAATSGYSRQQTVQAAGPSHNIGAGFLGTGTTL 60

Query: 64 KKIGVDQS 71
            +    S
Sbjct: 61 ADVRRIYS 68


>gi|115523168|ref|YP_780079.1| flagellar basal body rod protein FlgF [Rhodopseudomonas palustris
           BisA53]
 gi|115517115|gb|ABJ05099.1| flagellar basal body rod protein [Rhodopseudomonas palustris
           BisA53]
          Length = 243

 Score = 39.5 bits (90), Expect = 0.17,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 17/45 (37%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             G V+  NV+ L+E   M    R +      I+ S   M   + 
Sbjct: 191 QQGFVEGSNVDPLLELTQMMTAQRAFQGVSSLIEGSEGTMQNAIR 235


>gi|315618247|gb|EFU98837.1| flagellar basal-body rod protein FlgF [Escherichia coli 3431]
          Length = 251

 Score = 39.5 bits (90), Expect = 0.17,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 32/102 (31%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           N     +T       +   +    +        +     Q+T          +   SG++
Sbjct: 147 NPGDPANTVAPVGRLKLVKATGSEVQRGDDGIFRLSAETQATRGPVLQADPTLRVMSGVL 206

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NVN +   +DM  + R +   ++ I    D       LL
Sbjct: 207 EGSNVNAVAAMSDMIASARRFEMQMKVISSVDDNAGRANQLL 248


>gi|258622494|ref|ZP_05717516.1| putative flagellar hook-associated protein 1 [Vibrio mimicus
          VM573]
 gi|258585194|gb|EEW09921.1| putative flagellar hook-associated protein 1 [Vibrio mimicus
          VM573]
          Length = 457

 Score = 39.5 bits (90), Expect = 0.17,   Method: Composition-based stats.
 Identities = 15/69 (21%), Positives = 24/69 (34%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          +   +IA SGL      + + ++N+AN  T G +              E      GV V 
Sbjct: 1  MNIVNIALSGLNANRVALDVTAQNVANINTPGFSRQQAIMTSVGGGKYEKHSPGMGVEVN 60

Query: 65 KIGVDQSTF 73
           +      F
Sbjct: 61 SVRRITDQF 69



 Score = 36.4 bits (82), Expect = 1.3,   Method: Composition-based stats.
 Identities = 16/83 (19%), Positives = 28/83 (33%), Gaps = 2/83 (2%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
           IS  +      G    K     S +            +   V    VN   E A++   +
Sbjct: 376 ISINDAFTSMVGETAIKARQADSDYQTRASMNQQAIESRDNV--SAVNSDEEAANLMTFS 433

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
             Y AN++ I  ++ +  + L L
Sbjct: 434 NAYNANMKVISTANQLFDSVLQL 456


>gi|74311639|ref|YP_310058.1| flagellar basal body rod protein FlgF [Shigella sonnei Ss046]
 gi|73855116|gb|AAZ87823.1| flagellar protein for cell-proximal portion of basal-body rod
           [Shigella sonnei Ss046]
          Length = 251

 Score = 39.5 bits (90), Expect = 0.17,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 32/102 (31%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           N     +T       +   +    +        +     Q+T          +   SG++
Sbjct: 147 NPGDPANTVAPVGRLKLVKATGSEVQRGDDGIFRLSAETQATRGPVLQADPTLRVMSGVL 206

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NVN +   +DM  + R +   ++ I    D       LL
Sbjct: 207 EGSNVNAVAAMSDMIASARRFEMQMKVISSVDDNAGRANQLL 248


>gi|119384846|ref|YP_915902.1| flagellar basal body rod protein FlgF [Paracoccus denitrificans
           PD1222]
 gi|119374613|gb|ABL70206.1| flagellar basal body rod protein [Paracoccus denitrificans PD1222]
          Length = 238

 Score = 39.5 bits (90), Expect = 0.17,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 20/59 (33%)

Query: 72  TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
                 DP        G ++  NV+ + E A M E  R Y      + Q    +  T+ 
Sbjct: 176 DPGGAVDPLEGAVLRQGFLEDSNVDPVQEIARMIEVQRAYQLGQSFLDQEDQRIRQTIT 234


>gi|327393472|dbj|BAK10894.1| flagellar basal-body rod protein FlgF [Pantoea ananatis AJ13355]
          Length = 252

 Score = 39.5 bits (90), Expect = 0.17,   Method: Composition-based stats.
 Identities = 13/102 (12%), Positives = 31/102 (30%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           NA  + +        +   +  + +        +     Q+T          +    G++
Sbjct: 147 NAGDSPNATVQLGRLKLVQATGKELQRGDDGMFRPTAATQATRGAALQADPNMQVMPGVL 206

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NV  +    DM    R +   ++ I   ++       LL
Sbjct: 207 EGSNVKPVETMVDMIANARRFEMQMKVISNVNENEQKANQLL 248


>gi|325529015|gb|EGD06028.1| flagellar basal body rod protein FlgF [Burkholderia sp. TJI49]
          Length = 252

 Score = 39.5 bits (90), Expect = 0.17,   Method: Composition-based stats.
 Identities = 8/47 (17%), Positives = 17/47 (36%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
               ++  NVN +     M +  R +    + I+ +     +   LL
Sbjct: 203 TPNSLEGSNVNPVTAMVAMIDNARAFQLQSKLIQTADQNEQSANQLL 249


>gi|315296708|gb|EFU56003.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 16-3]
          Length = 251

 Score = 39.5 bits (90), Expect = 0.17,   Method: Composition-based stats.
 Identities = 15/102 (14%), Positives = 31/102 (30%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           N     +T       +   +    +        +     Q+           +   SG++
Sbjct: 147 NPGDPANTVAPVGRLKLVKATGSEVQRGDDGIFRLSAESQARRGPVLQADPTLRVMSGVL 206

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NVN +   +DM  + R +   ++ I    D       LL
Sbjct: 207 EGSNVNAVAAMSDMIASARRFEMQMKVISSVDDNAGRANQLL 248


>gi|296274029|ref|YP_003656660.1| fagellar hook-basal body protein [Arcobacter nitrofigilis DSM 7299]
 gi|296098203|gb|ADG94153.1| fagellar hook-basal body protein [Arcobacter nitrofigilis DSM 7299]
          Length = 241

 Score = 39.5 bits (90), Expect = 0.17,   Method: Composition-based stats.
 Identities = 13/82 (15%), Positives = 25/82 (30%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
               + +   G    K     Q     + +  +      G ++  NVN ++    + E  
Sbjct: 155 NIDYKNLEKFGDNNYKLKDEQQVAVQVQAEENNENFILQGSLEQSNVNSVMAMVQLIEAQ 214

Query: 109 RLYMANLQTIKQSHDMMTTTLD 130
           R Y    + I     M  T + 
Sbjct: 215 RSYEQAQKGITGIDSMNKTIIQ 236


>gi|146281777|ref|YP_001171930.1| flagellar hook-associated protein FlgK [Pseudomonas stutzeri A1501]
 gi|145569982|gb|ABP79088.1| flagellar hook-associated protein FlgK [Pseudomonas stutzeri A1501]
          Length = 669

 Score = 39.5 bits (90), Expect = 0.17,   Method: Composition-based stats.
 Identities = 18/99 (18%), Positives = 31/99 (31%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           + +   I  SGL+     +     NIAN  T G +  S   +  +  F  V +   G  V
Sbjct: 1   MASLISIGLSGLSASQTALATTGNNIANVDTAGYSRQSVVQKSASAEFIGVGYVGNGTTV 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETA 102
             +    S ++          +A        +N      
Sbjct: 61  ADVRRIYSEYLNTQLRTSTGLDAEAQTYLTQINQTDALL 99


>gi|158321541|ref|YP_001514048.1| flagellar hook-associated protein FlgK [Alkaliphilus oremlandii
          OhILAs]
 gi|158141740|gb|ABW20052.1| flagellar hook-associated protein FlgK [Alkaliphilus oremlandii
          OhILAs]
          Length = 522

 Score = 39.5 bits (90), Expect = 0.17,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 25/73 (34%), Gaps = 5/73 (6%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M         A SGL      + I   N+AN  T G +      +R        +  +GG
Sbjct: 1  MRSTFTGFTTAKSGLFASQRALDITGHNLANVNTKGYS-----RQRLEQVQSTPLKLAGG 55

Query: 61 VRVKKIGVDQSTF 73
            +   GVD +  
Sbjct: 56 QGMLGTGVDTTAI 68



 Score = 39.5 bits (90), Expect = 0.18,   Method: Composition-based stats.
 Identities = 7/38 (18%), Positives = 17/38 (44%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             V+   E A+M +    Y A+ + +    +M+   ++
Sbjct: 478 SGVSEDEELANMVKFQHAYNASARMMTTIDEMLDVLIN 515


>gi|255030434|ref|ZP_05302385.1| flagellar hook-associated protein FlgK [Listeria monocytogenes
           LO28]
          Length = 435

 Score = 39.5 bits (90), Expect = 0.17,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 20/39 (51%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
            VN+  E  ++ +    Y+AN + +   +DMM   L +L
Sbjct: 397 GVNIDEEMTNIMQYQSYYVANTKAMNTVNDMMKALLAML 435


>gi|332296517|ref|YP_004438440.1| flagellar hook-basal body protein [Thermodesulfobium narugense DSM
           14796]
 gi|332179620|gb|AEE15309.1| flagellar hook-basal body protein [Thermodesulfobium narugense DSM
           14796]
          Length = 251

 Score = 39.5 bits (90), Expect = 0.18,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 18/47 (38%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NVN + E  DM    R Y +  + I    +     L   R
Sbjct: 204 QGYLESSNVNTVREMVDMIALERAYESGQKAIVTEDNETGQMLSQFR 250


>gi|293409443|ref|ZP_06653019.1| flagellar basal-body rod protein FlgF [Escherichia coli B354]
 gi|291469911|gb|EFF12395.1| flagellar basal-body rod protein FlgF [Escherichia coli B354]
          Length = 251

 Score = 39.5 bits (90), Expect = 0.18,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 32/102 (31%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           N     +T       +   +    +        +     Q+T          +   SG++
Sbjct: 147 NPGDPANTVAPVGRLKLVKATGSEVQRGDDGIFRLSAESQATRGPVLQADPTLRVMSGVL 206

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NVN +   +DM  + R +   ++ I    D       LL
Sbjct: 207 EGSNVNAVAAMSDMIASARRFEMQMKVISSVDDNAGRANQLL 248


>gi|70729010|ref|YP_258744.1| flagellar hook-associated protein FlgK [Pseudomonas fluorescens
           Pf-5]
 gi|68343309|gb|AAY90915.1| flagellar hook-associated protein FlgK [Pseudomonas fluorescens
           Pf-5]
          Length = 683

 Score = 39.5 bits (90), Expect = 0.18,   Method: Composition-based stats.
 Identities = 17/98 (17%), Positives = 34/98 (34%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           ++  +I  SGLA     +     NIANA T G +        K  S    +    G  + 
Sbjct: 1   MSLLNIGMSGLAASQTSLMTTGNNIANADTAGYSRQQTVQGTKASSQNGNVFIGTGTTLA 60

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETA 102
            +    ++F++         N+        ++ + +  
Sbjct: 61  DVRRVYNSFLDAQLRTATSLNSDAAAFQGQISPIDQLL 98


>gi|229149940|ref|ZP_04278168.1| Flagellar hook-associated protein FlgK [Bacillus cereus m1550]
 gi|228633621|gb|EEK90222.1| Flagellar hook-associated protein FlgK [Bacillus cereus m1550]
          Length = 432

 Score = 39.5 bits (90), Expect = 0.18,   Method: Composition-based stats.
 Identities = 14/110 (12%), Positives = 34/110 (30%), Gaps = 12/110 (10%)

Query: 25  ISENIANARTTGDTPGSDPYRRK-TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPV 83
            + N+A     G   G    +             S     + I  D    +++       
Sbjct: 334 TANNLAAITDKGYKDGLTYKQALDQFLVGIASDKSSVNAYQNIHKDLLEGIQQEKMS--- 390

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
                      VN+  E  ++    + ++AN + I   +++  +   ++R
Sbjct: 391 --------IEGVNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSLFSIIR 432



 Score = 37.2 bits (84), Expect = 0.87,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 30/91 (32%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
          +   SG+      +Q   +N++N  T G       Y     S         G  V+ +GV
Sbjct: 7  NTPLSGMLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGSAGGSKGYAPEQRIGYGVQTLGV 66

Query: 69 DQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
          D+ T   +    +   +      Y N  +  
Sbjct: 67 DRITDEVKTKQYNDQMSQFSYYAYMNSTLSR 97


>gi|121607555|ref|YP_995362.1| flagellar hook-associated protein FlgK [Verminephrobacter eiseniae
           EF01-2]
 gi|121552195|gb|ABM56344.1| flagellar hook-associated protein FlgK [Verminephrobacter eiseniae
           EF01-2]
          Length = 658

 Score = 39.5 bits (90), Expect = 0.18,   Method: Composition-based stats.
 Identities = 19/103 (18%), Positives = 33/103 (32%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           +   +++   L      +Q    NIAN  T G +  S   +     F    +   GV V 
Sbjct: 1   MGLLNVSTRALLADQVVLQTTGHNIANVNTPGYSRQSVALQTVPGQFTGNGYIGQGVDVA 60

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
            I   QS  +         A ++  V+   +  L +       
Sbjct: 61  GIVRSQSELLTRQSAAAGAAQSADAVRAERLGQLQDVFSGGSA 103


>gi|77165837|ref|YP_344362.1| hypothetical protein Noc_2374 [Nitrosococcus oceani ATCC 19707]
 gi|254434880|ref|ZP_05048388.1| flagellar basal-body rod protein FlgF [Nitrosococcus oceani AFC27]
 gi|76884151|gb|ABA58832.1| Protein of unknown function DUF1078 [Nitrosococcus oceani ATCC
           19707]
 gi|207091213|gb|EDZ68484.1| flagellar basal-body rod protein FlgF [Nitrosococcus oceani AFC27]
          Length = 246

 Score = 39.5 bits (90), Expect = 0.18,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 21/44 (47%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  NV+ +    +M    R Y    + +K + D+ T +  +LR
Sbjct: 201 LESSNVSGVDALVEMIALARQYEMQTKMMKTAEDLDTASAQMLR 244


>gi|77464905|ref|YP_354409.1| flagellar basal body rod protein FlgF [Rhodobacter sphaeroides
           2.4.1]
 gi|77389323|gb|ABA80508.1| putative flagellar basal body rod protein [Rhodobacter sphaeroides
           2.4.1]
          Length = 239

 Score = 39.5 bits (90), Expect = 0.18,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 21/54 (38%)

Query: 77  FDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            +P        G ++  NV  + E A M E  R Y      + +  D + TT+ 
Sbjct: 180 TEPAEGATLVQGALEDSNVEPVSEIARMIEVQRAYEMGQSFLDREDDRIRTTVR 233


>gi|330818578|ref|YP_004362283.1| flagellar hook-associated protein FlgK [Burkholderia gladioli BSR3]
 gi|327370971|gb|AEA62327.1| flagellar hook-associated protein FlgK [Burkholderia gladioli BSR3]
          Length = 661

 Score = 39.5 bits (90), Expect = 0.18,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 20/39 (51%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN   E  ++ +  ++Y AN + I+ +  + +T L +
Sbjct: 621 SGVNQNEEAVNLMQYQQMYQANAKVIQTASTLFSTLLGI 659


>gi|299068738|emb|CBJ39977.1| flagellar hook-filament junction protein 1 [Ralstonia solanacearum
           CMR15]
          Length = 642

 Score = 39.5 bits (90), Expect = 0.18,   Method: Composition-based stats.
 Identities = 19/131 (14%), Positives = 44/131 (33%), Gaps = 5/131 (3%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV- 63
                ++ SG    +     +S N AN+    +       R  T+        S G    
Sbjct: 510 FNGIQMSLSGTPAANDTF-TVSANTANSTDGHNASAFAQLRNATVLDNGTTSISSGWSNL 568

Query: 64  ---KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
                I   Q++           ++ S       VN+  E  ++ +  + Y A+ + ++ 
Sbjct: 569 VTQVGIQASQASANVTSQKALLASSTSQQQSVSGVNLDDEAMNLMKYQQAYQASAKVMQT 628

Query: 121 SHDMMTTTLDL 131
           ++ +  + L +
Sbjct: 629 ANSLFDSLLSI 639


>gi|307731356|ref|YP_003908580.1| flagellar hook-associated protein FlgK [Burkholderia sp. CCGE1003]
 gi|307585891|gb|ADN59289.1| flagellar hook-associated protein FlgK [Burkholderia sp. CCGE1003]
          Length = 657

 Score = 39.5 bits (90), Expect = 0.18,   Method: Composition-based stats.
 Identities = 22/132 (16%), Positives = 48/132 (36%), Gaps = 3/132 (2%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV-MHGSGGVRV 63
           + +  +  SG+     +  I     AN         S+    K+++   V + G+    V
Sbjct: 526 MNNVSVTISGVPAAGDKFTIGPNTGANNDGRNALALSNLSTAKSMNGGTVTLTGAYANYV 585

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYP--NVNVLVETADMRETNRLYMANLQTIKQS 121
             +G   +           +       +     VN+  E A++ +  +LY AN + I+ +
Sbjct: 586 NDVGNQTNQIQTSSKAQASLVTQITTAQQSVSGVNINEEAANLLQYQQLYQANSKVIQTA 645

Query: 122 HDMMTTTLDLLR 133
             +  T L + +
Sbjct: 646 QTLFQTLLGIFQ 657



 Score = 34.1 bits (76), Expect = 6.4,   Method: Composition-based stats.
 Identities = 16/99 (16%), Positives = 33/99 (33%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +    ++  SGL      +    +NI+NA T G T  +  Y      +    +   GV  
Sbjct: 1   MSNLINLGLSGLNAAQWGLTTTGQNISNASTPGYTIETPVYAESGGQYTGSGYLPQGVST 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETA 102
             +    S ++         +++S       ++ L    
Sbjct: 61  VTVTRQYSQYLTTQLNDAQSSSSSLATYNSLISQLNNLI 99


>gi|258511381|ref|YP_003184815.1| fagellar hook-basal body protein [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
 gi|257478107|gb|ACV58426.1| fagellar hook-basal body protein [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
          Length = 335

 Score = 39.5 bits (90), Expect = 0.18,   Method: Composition-based stats.
 Identities = 8/45 (17%), Positives = 21/45 (46%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
           ++  NV++  + A+M      Y+AN   I   + ++   +++   
Sbjct: 291 LEGSNVDLSQQFAEMIVAQNAYVANTHMIGTDNAILQALVNMKNS 335



 Score = 37.2 bits (84), Expect = 0.70,   Method: Composition-based stats.
 Identities = 14/97 (14%), Positives = 30/97 (30%), Gaps = 6/97 (6%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR------RKTISFEEVMHG 57
          ++ S + A SG+      + ++  NIAN  T G       +           +     + 
Sbjct: 1  MLRSMNSAISGMQAFQTDLDVVGNNIANVETVGFKQSDVQFADLLSQTMSLGTAGTAPNP 60

Query: 58 SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPN 94
            G      G+  +   +        A    + + P+
Sbjct: 61 GTGSSGATTGIGGTNPEQVGLGVQVAATQMDMSQGPD 97


>gi|37525842|ref|NP_929186.1| flagellar basal-body rod protein FlgF (putative proximal rod
           protein) [Photorhabdus luminescens subsp. laumondii
           TTO1]
 gi|36785271|emb|CAE14212.1| Flagellar basal-body rod protein FlgF (Putative proximal rod
           protein) [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 251

 Score = 39.5 bits (90), Expect = 0.18,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 18/47 (38%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
             G+++  NVN +     M    R +   ++ I  S +       LL
Sbjct: 202 MPGVLEGSNVNPMESMVSMIANARRFEMQMKVIHSSDENAQRANQLL 248


>gi|146294544|ref|YP_001184968.1| flagellar hook-associated protein FlgK [Shewanella putrefaciens
           CN-32]
 gi|145566234|gb|ABP77169.1| flagellar hook-associated protein FlgK [Shewanella putrefaciens
           CN-32]
          Length = 457

 Score = 39.5 bits (90), Expect = 0.18,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 16/38 (42%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             VN   E  ++    + YMAN + I  +  +  T L 
Sbjct: 418 SGVNPDEEGINLIIYQQSYMANAKVISTADQLFQTMLS 455


>gi|300954383|ref|ZP_07166837.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 175-1]
 gi|300318619|gb|EFJ68403.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 175-1]
          Length = 251

 Score = 39.5 bits (90), Expect = 0.18,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 31/102 (30%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           N     +T       +   +    +        +     Q+T          +   SG +
Sbjct: 147 NPGDPANTVAPVGRLKLVKATGSEVQRGDDGIFRLSAETQATRGPVLQADPTLRVMSGGL 206

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NVN +   +DM  + R +   ++ I    D       LL
Sbjct: 207 EGSNVNAVAAMSDMIASARRFEMQMKVISSVDDNAGRANQLL 248


>gi|293414370|ref|ZP_06657019.1| flagellar basal-body rod protein FlgF [Escherichia coli B185]
 gi|291434428|gb|EFF07401.1| flagellar basal-body rod protein FlgF [Escherichia coli B185]
          Length = 251

 Score = 39.5 bits (90), Expect = 0.18,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 32/102 (31%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           N     +T       +   +    +        +     Q+T          +   SG++
Sbjct: 147 NPGDPANTVAPVGRLKLVKATGSEVQRGDDGIFRLSAETQATRGLVLQADPTLRVMSGVL 206

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NVN +   +DM  + R +   ++ I    D       LL
Sbjct: 207 EGSNVNTVAAMSDMIASARRFEMQMKVISSVDDNAGRANQLL 248


>gi|258625233|ref|ZP_05720145.1| Flagellar basal-body rod protein flgF [Vibrio mimicus VM603]
 gi|258582480|gb|EEW07317.1| Flagellar basal-body rod protein flgF [Vibrio mimicus VM603]
          Length = 243

 Score = 39.5 bits (90), Expect = 0.18,   Method: Composition-based stats.
 Identities = 7/46 (15%), Positives = 18/46 (39%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
              V+  NV+ + E   +    R +   ++ +K +  +      L+
Sbjct: 195 PEHVEGSNVSAVDELLSVMSLTRNFEMQVRMMKSAETLAQAGNKLM 240


>gi|218689030|ref|YP_002397242.1| flagellar basal body rod protein FlgF [Escherichia coli ED1a]
 gi|218426594|emb|CAR07422.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli ED1a]
          Length = 251

 Score = 39.5 bits (90), Expect = 0.18,   Method: Composition-based stats.
 Identities = 15/102 (14%), Positives = 31/102 (30%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           N     +T       +   +    +        +     Q+           +   SG++
Sbjct: 147 NPGDPANTVAPVGRLKLVKATGSEVQRGDDGIFRLSAESQARRGPVLQADPTLRVMSGVL 206

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NVN +   +DM  + R +   ++ I    D       LL
Sbjct: 207 EGSNVNAVAAMSDMIASARRFEMQMKVISSVDDNAGRANQLL 248


>gi|91792670|ref|YP_562321.1| flagellar hook-associated protein [Shewanella denitrificans OS217]
 gi|91714672|gb|ABE54598.1| Flagellar hook-associated protein [Shewanella denitrificans OS217]
          Length = 639

 Score = 39.5 bits (90), Expect = 0.18,   Method: Composition-based stats.
 Identities = 19/97 (19%), Positives = 31/97 (31%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           I   +IA +G+    A++ + S NIANA T G                   +   G  V 
Sbjct: 3   INLLNIARTGVLASQAQLGVTSNNIANANTEGYHRQVAQQGTTDPQMLGGNYYGTGTYVS 62

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVET 101
            +    + +          A       Y  V+ L + 
Sbjct: 63  DVKRIYNDYAARELRIGQTAKGEAQATYDKVSELDQL 99


>gi|254251192|ref|ZP_04944510.1| flagellar basal-body rod protein [Burkholderia dolosa AUO158]
 gi|124893801|gb|EAY67681.1| flagellar basal-body rod protein [Burkholderia dolosa AUO158]
          Length = 252

 Score = 39.5 bits (90), Expect = 0.18,   Method: Composition-based stats.
 Identities = 8/46 (17%), Positives = 17/46 (36%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
              ++  NVN +     M +  R +    + I+ +     +   LL
Sbjct: 204 PNSLEGSNVNPVNAMVSMIDNARAFQLQSKLIETADQNEQSANQLL 249


>gi|258622489|ref|ZP_05717511.1| Flagellar basal-body rod protein flgF [Vibrio mimicus VM573]
 gi|258585189|gb|EEW09916.1| Flagellar basal-body rod protein flgF [Vibrio mimicus VM573]
          Length = 243

 Score = 39.1 bits (89), Expect = 0.18,   Method: Composition-based stats.
 Identities = 7/46 (15%), Positives = 18/46 (39%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
              V+  NV+ + E   +    R +   ++ +K +  +      L+
Sbjct: 195 PEHVEGSNVSAVDELLSVMSLTRNFEMQVRMMKSAETLAQAGNKLM 240


>gi|254239444|ref|ZP_04932766.1| flagellar hook-associated protein 1 FlgK [Pseudomonas aeruginosa
           2192]
 gi|126192822|gb|EAZ56885.1| flagellar hook-associated protein 1 FlgK [Pseudomonas aeruginosa
           2192]
          Length = 682

 Score = 39.1 bits (89), Expect = 0.18,   Method: Composition-based stats.
 Identities = 19/123 (15%), Positives = 33/123 (26%), Gaps = 6/123 (4%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +     I  SGL      + I   NI N +T G +      + +   F    +   G ++
Sbjct: 1   MSDLLSIGLSGLGTSQTWLTITGHNITNVKTPGYSRQDAIQQTQVPQFSGAGYMGSGSQI 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET------NRLYMANLQT 117
             +    S F+          N+        +  L        T       R + A    
Sbjct: 61  VDVRRLASDFLTGQLRNATSQNSELSAFRSQIEQLDGLLSNTTTGVSPAMQRFFAALQAA 120

Query: 118 IKQ 120
              
Sbjct: 121 ANN 123


>gi|254473360|ref|ZP_05086757.1| flagellar basal body rod protein [Pseudovibrio sp. JE062]
 gi|211957476|gb|EEA92679.1| flagellar basal body rod protein [Pseudovibrio sp. JE062]
          Length = 241

 Score = 39.1 bits (89), Expect = 0.18,   Method: Composition-based stats.
 Identities = 11/100 (11%), Positives = 29/100 (29%), Gaps = 3/100 (3%)

Query: 34  TTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANA---SGIV 90
                 G+     + +    +       ++ + G          +P    A      G V
Sbjct: 137 PEISKDGTIYQEGRQVGVLGLFSIPEDAKLSRTGNSGVIPDAIAEPVLDFAENGFAQGFV 196

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           +  N+N + E   +    R + +    ++    +   T+ 
Sbjct: 197 EGANINPISEITKLITITRAFESTNSMMQSVESIRQQTIR 236


>gi|120597311|ref|YP_961885.1| flagellar hook-associated protein FlgK [Shewanella sp. W3-18-1]
 gi|120557404|gb|ABM23331.1| flagellar hook-associated protein FlgK [Shewanella sp. W3-18-1]
          Length = 457

 Score = 39.1 bits (89), Expect = 0.18,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 16/38 (42%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             VN   E  ++    + YMAN + I  +  +  T L 
Sbjct: 418 SGVNPDEEGINLIIYQQSYMANAKVISTADQLFQTMLS 455


>gi|73539456|ref|YP_299823.1| flagellar hook-associated protein FlgK [Ralstonia eutropha JMP134]
 gi|72122793|gb|AAZ64979.1| Protein of unknown function DUF1078 [Ralstonia eutropha JMP134]
          Length = 631

 Score = 39.1 bits (89), Expect = 0.18,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 20/41 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             VN+  ET  M    ++Y AN + I+ +  +  T + + R
Sbjct: 591 SGVNMDEETVSMLRFQQMYQANARVIQAASTLFDTIIGIGR 631


>gi|323174794|gb|EFZ60409.1| flagellar basal-body rod protein FlgF [Escherichia coli LT-68]
          Length = 251

 Score = 39.1 bits (89), Expect = 0.19,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 32/102 (31%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           N     +T       +   +    +        +     Q+T          +   SG++
Sbjct: 147 NPGDPANTVAPVGRLKLVKATGSEVQRGDDGIFRLSAETQATRGPVLQADPTLRVMSGVL 206

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NVN +   +DM  + R +   ++ I    D       LL
Sbjct: 207 EGSNVNAVAAMSDMIASARRFEMQMKVISSVDDNAGRANQLL 248


>gi|331652130|ref|ZP_08353149.1| flagellar basal-body rod protein FlgF [Escherichia coli M718]
 gi|331050408|gb|EGI22466.1| flagellar basal-body rod protein FlgF [Escherichia coli M718]
          Length = 251

 Score = 39.1 bits (89), Expect = 0.19,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 32/102 (31%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           N     +T       +   +    +        +     Q+T          +   SG++
Sbjct: 147 NPGDPANTVAPVGRLKLVKATGSEVQRGDDGIFRLSAERQATRGPVLQADPTLRVMSGVL 206

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NVN +   +DM  + R +   ++ I    D       LL
Sbjct: 207 EGSNVNAVAAMSDMIASARRFEMQMKVISSVDDNAGRANQLL 248


>gi|146305256|ref|YP_001185721.1| flagellar hook-associated protein FlgK [Pseudomonas mendocina ymp]
 gi|145573457|gb|ABP82989.1| flagellar hook-associated protein FlgK [Pseudomonas mendocina ymp]
          Length = 455

 Score = 39.1 bits (89), Expect = 0.19,   Method: Composition-based stats.
 Identities = 13/117 (11%), Positives = 35/117 (29%), Gaps = 2/117 (1%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFV 74
           L  +       +    N     D  G           +  ++ +    + ++  D     
Sbjct: 336 LTAEQLAFSSAAGESGNNEVLLDLLGLKNQTITLNGSQVTLNDAYAGLLGQVASDSRQNQ 395

Query: 75  EEFDPGHPVANASGIVKYP--NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
            +      V   +   +     V++  E  ++    + Y AN++ I  ++ +    L
Sbjct: 396 ADLKSATAVTQQAQSQRDSVSAVSLDEEAVNLMTYQQAYQANMKVISTANQLFDDML 452


>gi|99082805|ref|YP_614959.1| flagellar basal body rod protein FlgB [Ruegeria sp. TM1040]
 gi|99039085|gb|ABF65697.1| Flagellar basal-body rod protein flgB [Ruegeria sp. TM1040]
          Length = 129

 Score = 39.1 bits (89), Expect = 0.19,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 47/135 (34%), Gaps = 7/135 (5%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGD-TPGSDPYRRKTISFEEVMHGSG 59
           M   +   +IA S       R  ++SENIANA T G       P+R    + E       
Sbjct: 1   MFERLNVFNIAYSMATHAGKRQALVSENIANADTPGYHAKDIKPFREVFAASEAQGDMIA 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
                  GV+ S F           + +      +V++  +  +  E  R +   L   +
Sbjct: 61  SRGSHINGVNGSGFDWAVTTDESSVDPNNN----SVSLEEQILNGIEAKRQHDRALAIYR 116

Query: 120 QSHDMMTTTLDLLRD 134
            S +++     L R 
Sbjct: 117 SSMNILRA--SLGRS 129


>gi|227876730|ref|ZP_03994839.1| possible flagellar hook-associated protein FlgK [Mobiluncus mulieris
            ATCC 35243]
 gi|269976257|ref|ZP_06183253.1| putative flagellar hook-associated protein FlgK [Mobiluncus mulieris
            28-1]
 gi|227842627|gb|EEJ52827.1| possible flagellar hook-associated protein FlgK [Mobiluncus mulieris
            ATCC 35243]
 gi|269935586|gb|EEZ92124.1| putative flagellar hook-associated protein FlgK [Mobiluncus mulieris
            28-1]
          Length = 1034

 Score = 39.1 bits (89), Expect = 0.19,   Method: Composition-based stats.
 Identities = 7/41 (17%), Positives = 17/41 (41%)

Query: 93   PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             +V++  E  ++      Y    +     + M+ T ++L R
Sbjct: 994  SSVDMNEEVMNLIRGQHAYAGAARITSTVNSMLETLINLGR 1034


>gi|56695101|ref|YP_165448.1| flagellar basal body rod protein FlgF [Ruegeria pomeroyi DSS-3]
 gi|56676838|gb|AAV93504.1| flagellar basal-body rod protein FlgF [Ruegeria pomeroyi DSS-3]
          Length = 216

 Score = 39.1 bits (89), Expect = 0.19,   Method: Composition-based stats.
 Identities = 12/58 (20%), Positives = 25/58 (43%), Gaps = 1/58 (1%)

Query: 77  FDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD-LLR 133
            +P    +   G ++  NVN + + A + E  R Y      ++   + +   ++ LLR
Sbjct: 159 TEPIEGASIMQGFLEGSNVNAIDQVARLVEVQRAYELGQSFLQAEDERIRNAVNSLLR 216


>gi|306821564|ref|ZP_07455162.1| flagellar hook-associated protein FlgK [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
 gi|304550309|gb|EFM38302.1| flagellar hook-associated protein FlgK [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
          Length = 536

 Score = 39.1 bits (89), Expect = 0.19,   Method: Composition-based stats.
 Identities = 9/73 (12%), Positives = 27/73 (36%), Gaps = 1/73 (1%)

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
            V  +   ++    +      +      ++  +V+   E  +M +    Y A+ + I   
Sbjct: 461 SVLGVDAKEAKDNYKNQVTLSLEADMSRMEVSSVSENEELTNMVKFQHAYNASARMITTV 520

Query: 122 HDMMTTTLD-LLR 133
            +M+   ++ + R
Sbjct: 521 DEMIDVLINRMGR 533



 Score = 37.9 bits (86), Expect = 0.51,   Method: Composition-based stats.
 Identities = 17/95 (17%), Positives = 27/95 (28%), Gaps = 1/95 (1%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
            +  + A SGL      +  I  NIAN  T G T         + +  E  +  G     
Sbjct: 19  FSGLNAATSGLFAAQRVLDTIGHNIANQNTPGYTRQRANQSAASATSIENGNYLGMGVKM 78

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
                    + +    +      G     NV+   
Sbjct: 79  SSISQIRDELLDIKYRNENT-KKGYWSQSNVSFAQ 112


>gi|257484945|ref|ZP_05638986.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv.
           tabaci ATCC 11528]
          Length = 126

 Score = 39.1 bits (89), Expect = 0.19,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 23/56 (41%), Gaps = 3/56 (5%)

Query: 80  GHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS---HDMMTTTLDLL 132
              V   SG ++  NVN + E   +   +R +  +++ +K +      M   L L 
Sbjct: 71  DATVQVESGFLQASNVNAVEEMTSVLALSRQFELHVKMMKTAEEDDQSMARVLQLG 126


>gi|297544025|ref|YP_003676327.1| flagellar hook-associated protein FlgK [Thermoanaerobacter
           mathranii subsp. mathranii str. A3]
 gi|296841800|gb|ADH60316.1| flagellar hook-associated protein FlgK [Thermoanaerobacter
           mathranii subsp. mathranii str. A3]
          Length = 480

 Score = 39.1 bits (89), Expect = 0.19,   Method: Composition-based stats.
 Identities = 9/66 (13%), Positives = 25/66 (37%)

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
            +  +Q+  + E                  V++  E  +M +  + Y A+ + I    ++
Sbjct: 408 GVDAEQANLMLENQEFMIEQIDLNRQSISGVSLDEEMTNMLKYQKAYAASARIITAIDEL 467

Query: 125 MTTTLD 130
           + T ++
Sbjct: 468 LDTLIN 473



 Score = 36.0 bits (81), Expect = 1.7,   Method: Composition-based stats.
 Identities = 14/87 (16%), Positives = 27/87 (31%), Gaps = 1/87 (1%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDP-YRRKTISFEEVMHGSGGVRV 63
               IA +GL V    + +   NIANA T G T            +   +    G    
Sbjct: 4  FQGLEIAKTGLFVSQKALDVTGHNIANANTPGYTRQVVDMVSIAPPTTFGMYDQWGKAIG 63

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIV 90
          + + +     + +    +     +  +
Sbjct: 64 EGVKIQDIRQIRDQFLDNQYRRENKFL 90


>gi|163733142|ref|ZP_02140586.1| flagellar basal-body rod protein FlgF, putative [Roseobacter
           litoralis Och 149]
 gi|161393677|gb|EDQ18002.1| flagellar basal-body rod protein FlgF, putative [Roseobacter
           litoralis Och 149]
          Length = 237

 Score = 39.1 bits (89), Expect = 0.19,   Method: Composition-based stats.
 Identities = 16/105 (15%), Positives = 34/105 (32%), Gaps = 5/105 (4%)

Query: 26  SENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVAN 85
           +E+IA +     +   DP  +  +       G           D+      ++P      
Sbjct: 134 AEDIAVSADGTISTNGDPVGQLGLVQPLNPQGLLREDGVMFRADEG-----YEPAEQGRI 188

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
               V+  NVN +++   M E  R Y      ++   + +   + 
Sbjct: 189 LQSFVENSNVNPILQLTRMIEVQRAYELGASFLEAEDERVRQAMR 233


>gi|212709493|ref|ZP_03317621.1| hypothetical protein PROVALCAL_00535 [Providencia alcalifaciens DSM
           30120]
 gi|212687831|gb|EEB47359.1| hypothetical protein PROVALCAL_00535 [Providencia alcalifaciens DSM
           30120]
          Length = 251

 Score = 39.1 bits (89), Expect = 0.19,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 16/43 (37%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           ++  NVN       M    R +   ++ I+ + +       LL
Sbjct: 206 IEGSNVNAAEAMVSMIANARHFEMQMKVIRSADENAQRANQLL 248


>gi|91224193|ref|ZP_01259456.1| putative flagellar hook-associated protein [Vibrio alginolyticus
          12G01]
 gi|91191104|gb|EAS77370.1| putative flagellar hook-associated protein [Vibrio alginolyticus
          12G01]
          Length = 457

 Score = 39.1 bits (89), Expect = 0.19,   Method: Composition-based stats.
 Identities = 18/95 (18%), Positives = 31/95 (32%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          +   +IA SGL      + + ++N+AN  T G +                +    GV V 
Sbjct: 1  MNLVNIALSGLGANRVALDVTAQNVANVNTVGYSRQQALMASVDDGKANRLSPGLGVEVT 60

Query: 65 KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
           I      F+ +         A       N++ L 
Sbjct: 61 SIRRVTDQFLIKQTWSTNSMAAYASGYTSNMSQLE 95


>gi|260767929|ref|ZP_05876863.1| flagellar hook-associated protein FlgK [Vibrio furnissii CIP
          102972]
 gi|260615959|gb|EEX41144.1| flagellar hook-associated protein FlgK [Vibrio furnissii CIP
          102972]
 gi|315179632|gb|ADT86546.1| flagellar hook-associated protein [Vibrio furnissii NCTC 11218]
          Length = 457

 Score = 39.1 bits (89), Expect = 0.19,   Method: Composition-based stats.
 Identities = 16/95 (16%), Positives = 33/95 (34%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          +   +IA SGL      + + ++N+AN  T G +           +  + +    GV V 
Sbjct: 1  MNLVNIALSGLNANRVALDVTAQNVANINTPGYSRQQALMASVGGAKYDNLSAGMGVEVT 60

Query: 65 KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
           I      F+ +         +       +++ L 
Sbjct: 61 SIRRVTDQFLVKQTWSTGSVASYASRYTSSMSYLE 95


>gi|297584032|ref|YP_003699812.1| flagellar basal-body rod protein FlgB [Bacillus selenitireducens
           MLS10]
 gi|297142489|gb|ADH99246.1| flagellar basal-body rod protein FlgB [Bacillus selenitireducens
           MLS10]
          Length = 134

 Score = 39.1 bits (89), Expect = 0.19,   Method: Composition-based stats.
 Identities = 18/101 (17%), Positives = 29/101 (28%)

Query: 13  SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQST 72
           + L   + R   IS+N+AN  T         +  +     +           +       
Sbjct: 14  TSLNASARRQDTISDNVANVDTPNYKAKKTVFNHQLQRAMDDQRLRANRLDDRHIEFGGP 73

Query: 73  FVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
              +        N        NV++  E ADM E    Y A
Sbjct: 74  PRSDAPHIIERTNTQYNHNGNNVDIDKEMADMAENQIYYNA 114


>gi|2459711|gb|AAB71787.1| FlgB [Agrobacterium tumefaciens]
          Length = 134

 Score = 39.1 bits (89), Expect = 0.19,   Method: Composition-based stats.
 Identities = 27/113 (23%), Positives = 43/113 (38%), Gaps = 4/113 (3%)

Query: 19  SARMQIISENIANARTTG-DTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEF 77
           S R ++++ NIANA T         P+     +  + +  +    V       S  +   
Sbjct: 22  SVRQEVVATNIANANTPKFHAKDVSPFEAVMQATSQQVGMARTNPVHLGESTLSENIAVR 81

Query: 78  DPGHPVANASGIVKYPN-VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
              +PV N  G+ +  N V +  E     E  R Y  N   +K  H MM  T+
Sbjct: 82  --DNPVNNEIGMQESGNSVGLAEEMTKTGEIKRQYDLNASLVKSFHRMMLMTV 132


>gi|89072314|ref|ZP_01158893.1| putative flagellar basal-body rod protein [Photobacterium sp.
           SKA34]
 gi|89051846|gb|EAR57298.1| putative flagellar basal-body rod protein [Photobacterium sp.
           SKA34]
          Length = 243

 Score = 39.1 bits (89), Expect = 0.19,   Method: Composition-based stats.
 Identities = 10/56 (17%), Positives = 23/56 (41%)

Query: 77  FDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           F     VA  +G ++  NV+ + E   +    R +   ++ +K +  +      L+
Sbjct: 185 FAQDPSVAMTAGHLEGSNVSAINELVSVMSLTRNFEMQVRMMKTAETLAQAGTRLM 240


>gi|283782100|ref|YP_003372855.1| flagellar basal body FlaE domain-containing protein [Pirellula
           staleyi DSM 6068]
 gi|283440553|gb|ADB18995.1| flagellar basal body FlaE domain protein [Pirellula staleyi DSM
           6068]
          Length = 815

 Score = 39.1 bits (89), Expect = 0.19,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 28/66 (42%), Gaps = 2/66 (3%)

Query: 70  QSTFVEEFDPGHPVANA--SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
            S    E +PG+    +  SG V+  N ++     D+      Y  N + I  + +++  
Sbjct: 750 NSGLPVEGNPGNDGMGSIISGAVELSNTDIGKNLIDLVLATTQYRGNARVITAAQELLDE 809

Query: 128 TLDLLR 133
            L+L R
Sbjct: 810 LLNLRR 815



 Score = 36.8 bits (83), Expect = 1.1,   Method: Composition-based stats.
 Identities = 8/46 (17%), Positives = 21/46 (45%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRK 47
            L ++   A +G+     ++ ++  N+AN++T G       +  +
Sbjct: 1  MGLASALTTALTGMTAAETQIDVVGNNLANSQTVGFKASDSVFATQ 46


>gi|171321839|ref|ZP_02910740.1| flagellar basal-body rod protein FlgF [Burkholderia ambifaria
           MEX-5]
 gi|171092877|gb|EDT38129.1| flagellar basal-body rod protein FlgF [Burkholderia ambifaria
           MEX-5]
          Length = 252

 Score = 39.1 bits (89), Expect = 0.19,   Method: Composition-based stats.
 Identities = 8/47 (17%), Positives = 17/47 (36%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
               ++  NVN +     M +  R +    + I+ +     +   LL
Sbjct: 203 TPNSLEGSNVNPVTAMVAMIDNARAFQLQSKLIQTADQNEQSANQLL 249


>gi|149178721|ref|ZP_01857304.1| flagellar hook protein FlgE [Planctomyces maris DSM 8797]
 gi|148842419|gb|EDL56799.1| flagellar hook protein FlgE [Planctomyces maris DSM 8797]
          Length = 563

 Score = 39.1 bits (89), Expect = 0.19,   Method: Composition-based stats.
 Identities = 13/86 (15%), Positives = 27/86 (31%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
             S  + +   G    ++       F+            +G ++  N +V     D+   
Sbjct: 478 RFSNPQGLLEFGNSTFQEGVSSGPPFLVTPGNFGAGTIRAGSIELSNTDVGRSLVDLIVA 537

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  Y  N + I     ++   L L R
Sbjct: 538 STNYRGNARVISSVQQLVDELLVLGR 563


>gi|170020527|ref|YP_001725481.1| flagellar basal body rod protein FlgF [Escherichia coli ATCC 8739]
 gi|312971214|ref|ZP_07785392.1| flagellar basal-body rod protein FlgF [Escherichia coli 1827-70]
 gi|169755455|gb|ACA78154.1| flagellar basal-body rod protein FlgF [Escherichia coli ATCC 8739]
 gi|310336416|gb|EFQ01602.1| flagellar basal-body rod protein FlgF [Escherichia coli 1827-70]
          Length = 251

 Score = 39.1 bits (89), Expect = 0.19,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 32/102 (31%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           N     +T       +   +    +        +     Q+T          +   SG++
Sbjct: 147 NPGDPANTVAPVGRLKLVKATGSEVQRGDDGIFRLSAESQATRGPILQADPTLRVMSGVL 206

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NVN +   +DM  + R +   ++ I    D       LL
Sbjct: 207 EGSNVNAVAAMSDMIASARRFEMQMKVISSVDDNAGRANQLL 248


>gi|87306349|ref|ZP_01088496.1| probable flagellar hook-associated protein [Blastopirellula marina
           DSM 3645]
 gi|87290528|gb|EAQ82415.1| probable flagellar hook-associated protein [Blastopirellula marina
           DSM 3645]
          Length = 567

 Score = 39.1 bits (89), Expect = 0.19,   Method: Composition-based stats.
 Identities = 5/40 (12%), Positives = 17/40 (42%)

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
              V++  E  ++    R + A  + I    +++   +++
Sbjct: 528 LSGVSLDEEAVNLITFQRQFQAASRLISVIDELLEVLVNI 567



 Score = 38.7 bits (88), Expect = 0.25,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 30/105 (28%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             L  S   + + L      +Q+   NIAN  T         Y          +    GV
Sbjct: 1   MTLFTSLQQSKNALVAAQIGIQVTGNNIANVNTPDYLRERVIYTPAPTQSYGNLRLGMGV 60

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
           +V+ +      F+EE         A+G  +      L        
Sbjct: 61  QVEAVVQQVDQFLEERLRNSISDLANGETQESAYLQLEALVGELS 105


>gi|115353117|ref|YP_774956.1| flagellar basal body rod protein FlgF [Burkholderia ambifaria AMMD]
 gi|170703097|ref|ZP_02893917.1| flagellar basal-body rod protein FlgF [Burkholderia ambifaria
           IOP40-10]
 gi|115283105|gb|ABI88622.1| flagellar basal-body rod protein FlgF [Burkholderia ambifaria AMMD]
 gi|170131994|gb|EDT00502.1| flagellar basal-body rod protein FlgF [Burkholderia ambifaria
           IOP40-10]
          Length = 252

 Score = 39.1 bits (89), Expect = 0.19,   Method: Composition-based stats.
 Identities = 8/47 (17%), Positives = 17/47 (36%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
               ++  NVN +     M +  R +    + I+ +     +   LL
Sbjct: 203 TPNSLEGSNVNPVTAMVAMIDNARAFQLQSKLIQTADQNEQSANQLL 249


>gi|270262400|ref|ZP_06190671.1| flagellar basal-body rod protein FlgF [Serratia odorifera 4Rx13]
 gi|270043084|gb|EFA16177.1| flagellar basal-body rod protein FlgF [Serratia odorifera 4Rx13]
          Length = 251

 Score = 39.1 bits (89), Expect = 0.19,   Method: Composition-based stats.
 Identities = 14/102 (13%), Positives = 28/102 (27%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           NA    +T       +   +    +        +     Q     +      V    G++
Sbjct: 147 NAGDPPNTIAQIGRLKLVKANAREVMRGDDGLFRLTPETQQQRGNQLQNDPLVRVMPGVL 206

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NV  +    DM    R +   ++ I    +       LL
Sbjct: 207 EGSNVKPMETMVDMIANARRFEMQMKVIHSVDENEQRANSLL 248


>gi|227356000|ref|ZP_03840392.1| flagellar basal-body rod protein [Proteus mirabilis ATCC 29906]
 gi|227163988|gb|EEI48890.1| flagellar basal-body rod protein [Proteus mirabilis ATCC 29906]
          Length = 251

 Score = 39.1 bits (89), Expect = 0.19,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 16/43 (37%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           ++  NVN      DM    R +   ++ I  + D       LL
Sbjct: 206 LEGSNVNPAEAMVDMIANARRFEMQMKVIHSADDNAQRANQLL 248


>gi|254437478|ref|ZP_05050972.1| hypothetical protein OA307_2348 [Octadecabacter antarcticus 307]
 gi|198252924|gb|EDY77238.1| hypothetical protein OA307_2348 [Octadecabacter antarcticus 307]
          Length = 253

 Score = 39.1 bits (89), Expect = 0.19,   Method: Composition-based stats.
 Identities = 12/64 (18%), Positives = 26/64 (40%)

Query: 70  QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
            S   E  +P      A G ++  NVN +       E+ R +  +++ I  + ++     
Sbjct: 187 PSNNTELPEPDQRARIAQGFLESSNVNTISALIKNIESQRHFEMSVKFIALAKEIDEGGS 246

Query: 130 DLLR 133
            ++R
Sbjct: 247 RIMR 250


>gi|146277702|ref|YP_001167861.1| flagellar hook-associated protein FlgK [Rhodobacter sphaeroides
          ATCC 17025]
 gi|145555943|gb|ABP70556.1| flagellar hook-associated protein FlgK [Rhodobacter sphaeroides
          ATCC 17025]
          Length = 1365

 Score = 39.1 bits (89), Expect = 0.19,   Method: Composition-based stats.
 Identities = 13/69 (18%), Positives = 26/69 (37%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          ++   IA SG+    + + + +ENIAN  T G         +           +G  +  
Sbjct: 1  MSILDIARSGILSYRSALSVTAENIANVNTEGYVRREVVLAQVPGGQVSPTSAAGSGQGV 60

Query: 65 KIGVDQSTF 73
          ++   +  F
Sbjct: 61 RVEDVRRAF 69


>gi|313620048|gb|EFR91563.1| flagellar hook-associated protein FlgK [Listeria innocua FSL
           S4-378]
          Length = 506

 Score = 39.1 bits (89), Expect = 0.20,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 20/39 (51%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
            VN+  E  ++ +    Y+AN + +   +DMM   L +L
Sbjct: 468 GVNIDEEMTNIMQYQSYYVANTKAMNTVNDMMKALLAML 506


>gi|302382561|ref|YP_003818384.1| flagellar hook-associated protein FlgK [Brevundimonas
          subvibrioides ATCC 15264]
 gi|302193189|gb|ADL00761.1| flagellar hook-associated protein FlgK [Brevundimonas
          subvibrioides ATCC 15264]
          Length = 707

 Score = 39.1 bits (89), Expect = 0.20,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 29/66 (43%), Gaps = 7/66 (10%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            L +  +IANSGL     +++++S+N++N  T G       Y RK      +     G 
Sbjct: 1  MSLNSILNIANSGLQAAQQQLRVVSDNVSNVNTPG-------YVRKIAEQTSLTTQGVGS 53

Query: 62 RVKKIG 67
           V+   
Sbjct: 54 GVEVTR 59



 Score = 35.2 bits (79), Expect = 3.2,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 21/42 (50%)

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           Y  VN+  E   M    + + A+ + I+ + DM  T L ++R
Sbjct: 666 YEGVNLDEELVLMTTYQQAFNASARLIQAAQDMYDTLLGMVR 707


>gi|1086558|gb|AAB68965.1| FlgB [Agrobacterium tumefaciens]
          Length = 134

 Score = 39.1 bits (89), Expect = 0.20,   Method: Composition-based stats.
 Identities = 29/118 (24%), Positives = 46/118 (38%), Gaps = 14/118 (11%)

Query: 19  SARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVE--- 75
           S R ++++ NIANA T         +  K +S  E +  +   +V     + +   E   
Sbjct: 22  SVRQEVVATNIANANTPK-------FHAKDVSPFEAVMQATSQQVGMARTNPAPPRESTL 74

Query: 76  ---EFDPGHPVANASGIVKYPN-VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
                   +PV N  G+ +  N V +  E     E  R Y  N   +K  H MM  T+
Sbjct: 75  SENIAVRDNPVNNEIGMQESGNSVGLAEEMTKTGEIKRQYDLNASLVKSFHRMMLMTV 132


>gi|157155680|ref|YP_001462311.1| flagellar basal body rod protein FlgF [Escherichia coli E24377A]
 gi|193064568|ref|ZP_03045648.1| flagellar basal-body rod protein FlgF [Escherichia coli E22]
 gi|256018666|ref|ZP_05432531.1| flagellar basal body rod protein FlgF [Shigella sp. D9]
 gi|260843317|ref|YP_003221095.1| flagellar component FlgF of cell-proximal portion of basal-body rod
           [Escherichia coli O103:H2 str. 12009]
 gi|260854560|ref|YP_003228451.1| flagellar component FlgF of cell-proximal portion of basal-body rod
           [Escherichia coli O26:H11 str. 11368]
 gi|260867440|ref|YP_003233842.1| flagellar component FlgF of cell-proximal portion of basal-body rod
           [Escherichia coli O111:H- str. 11128]
 gi|293433367|ref|ZP_06661795.1| flagellar basal-body rod protein FlgF [Escherichia coli B088]
 gi|300816779|ref|ZP_07096999.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 107-1]
 gi|300922603|ref|ZP_07138703.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 182-1]
 gi|301328553|ref|ZP_07221614.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 78-1]
 gi|332279735|ref|ZP_08392148.1| flagellar basal-body rod protein FlgF [Shigella sp. D9]
 gi|157077710|gb|ABV17418.1| flagellar basal-body rod protein FlgF [Escherichia coli E24377A]
 gi|192927820|gb|EDV82434.1| flagellar basal-body rod protein FlgF [Escherichia coli E22]
 gi|257753209|dbj|BAI24711.1| flagellar component FlgF of cell-proximal portion of basal-body rod
           [Escherichia coli O26:H11 str. 11368]
 gi|257758464|dbj|BAI29961.1| flagellar component FlgF of cell-proximal portion of basal-body rod
           [Escherichia coli O103:H2 str. 12009]
 gi|257763796|dbj|BAI35291.1| flagellar component FlgF of cell-proximal portion of basal-body rod
           [Escherichia coli O111:H- str. 11128]
 gi|291324186|gb|EFE63608.1| flagellar basal-body rod protein FlgF [Escherichia coli B088]
 gi|300421080|gb|EFK04391.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 182-1]
 gi|300530553|gb|EFK51615.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 107-1]
 gi|300844945|gb|EFK72705.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 78-1]
 gi|323156884|gb|EFZ43018.1| flagellar basal-body rod protein FlgF [Escherichia coli EPECa14]
 gi|323175692|gb|EFZ61286.1| flagellar basal-body rod protein FlgF [Escherichia coli 1180]
 gi|323185800|gb|EFZ71161.1| flagellar basal-body rod protein FlgF [Escherichia coli 1357]
 gi|324117352|gb|EGC11259.1| flagellar basal-body rod protein FlgF [Escherichia coli E1167]
 gi|332102087|gb|EGJ05433.1| flagellar basal-body rod protein FlgF [Shigella sp. D9]
          Length = 251

 Score = 39.1 bits (89), Expect = 0.20,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 32/102 (31%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           N     +T       +   +    +        +     Q+T          +   SG++
Sbjct: 147 NPGDPANTVAPVGRLKLVKATGSEVQRGDDGIFRLSAESQATRGPILQADPTLRVMSGVL 206

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NVN +   +DM  + R +   ++ I    D       LL
Sbjct: 207 EGSNVNAVAAMSDMIASARRFEMQMKVISSVDDNAGRANQLL 248


>gi|134297197|ref|YP_001120932.1| flagellar basal body rod protein FlgF [Burkholderia vietnamiensis
           G4]
 gi|134140354|gb|ABO56097.1| flagellar basal-body rod protein FlgF [Burkholderia vietnamiensis
           G4]
          Length = 252

 Score = 39.1 bits (89), Expect = 0.20,   Method: Composition-based stats.
 Identities = 8/47 (17%), Positives = 17/47 (36%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
               ++  NVN +     M +  R +    + I+ +     +   LL
Sbjct: 203 TPNSLEGSNVNPVTAMVAMIDNARAFQLQSKLIQTADQNEQSANQLL 249


>gi|225166310|ref|ZP_03727999.1| flagellar hook-associated protein FlgK [Opitutaceae bacterium TAV2]
 gi|224799447|gb|EEG17987.1| flagellar hook-associated protein FlgK [Opitutaceae bacterium TAV2]
          Length = 469

 Score = 39.1 bits (89), Expect = 0.20,   Method: Composition-based stats.
 Identities = 21/133 (15%), Positives = 42/133 (31%), Gaps = 9/133 (6%)

Query: 5   IASAHIA-NSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
             +  IA   GL V + R    +   A          +    R + +   ++ G+     
Sbjct: 334 TGAGDIALAPGLTVATLR--TTATGGAGDSDLITAVANLINTRFSTADGALIDGTLTAHY 391

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIV------KYPNVNVLVETADMRETNRLYMANLQT 117
                     V   D  H    +   +          V++  ET ++    R Y A+ + 
Sbjct: 392 TSAVSHFGQAVSSADTRHQSQYSIETLIREQRDSTSGVSLDEETINLVNYQRAYQASARV 451

Query: 118 IKQSHDMMTTTLD 130
           I    D++ T ++
Sbjct: 452 ITILDDLLNTVVN 464


>gi|313624689|gb|EFR94646.1| flagellar hook-associated protein FlgK [Listeria innocua FSL
           J1-023]
          Length = 506

 Score = 39.1 bits (89), Expect = 0.20,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 20/39 (51%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
            VN+  E  ++ +    Y+AN + +   +DMM   L +L
Sbjct: 468 GVNIDEEMTNIMQYQSYYVANTKAMNTVNDMMKALLAML 506


>gi|313106041|ref|ZP_07792300.1| flagellar hook-associated protein FlgK [Pseudomonas aeruginosa
           39016]
 gi|310878802|gb|EFQ37396.1| flagellar hook-associated protein FlgK [Pseudomonas aeruginosa
           39016]
          Length = 682

 Score = 39.1 bits (89), Expect = 0.20,   Method: Composition-based stats.
 Identities = 19/123 (15%), Positives = 33/123 (26%), Gaps = 6/123 (4%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +     I  SGL      + I   NI N +T G +      + +   F    +   G ++
Sbjct: 1   MSDLLSIGLSGLGTSQTWLTITGHNITNVKTPGYSRQDAIQQTQVPQFSGAGYMGSGSQI 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET------NRLYMANLQT 117
             +    S F+          N+        +  L        T       R + A    
Sbjct: 61  VDVRRLASDFLTGQLRNATSQNSELSAFRSQIEQLDGLLSNTTTGVSPAMQRFFAALQAA 120

Query: 118 IKQ 120
              
Sbjct: 121 ANN 123


>gi|225871951|ref|YP_002753405.1| flagellar hook-associated protein FlgK [Acidobacterium capsulatum
          ATCC 51196]
 gi|225791881|gb|ACO31971.1| flagellar hook-associated protein FlgK [Acidobacterium capsulatum
          ATCC 51196]
          Length = 472

 Score = 39.1 bits (89), Expect = 0.20,   Method: Composition-based stats.
 Identities = 19/99 (19%), Positives = 37/99 (37%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  +  + +IA   L    A + I+S N+ANA TTG T     ++         +    G
Sbjct: 1  MASIGTAFNIATGALEADQAALSIVSNNVANANTTGYTREVPVWQMADSIQINGITYGDG 60

Query: 61 VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
          V +      +S  +++       A +    +   +  + 
Sbjct: 61 VNMTGPQSQRSPVLQQSLDQQTQAQSDSAARLSALQQVQ 99


>gi|332311130|gb|EGJ24225.1| Flagellar hook-associated protein 1 [Listeria monocytogenes str.
           Scott A]
          Length = 494

 Score = 39.1 bits (89), Expect = 0.20,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 20/39 (51%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
            VN+  E  ++ +    Y+AN + +   +DMM   L +L
Sbjct: 456 GVNIDEEMTNIMQYQSYYVANTKAMNTVNDMMKALLAML 494


>gi|320179223|gb|EFW54181.1| Flagellar basal-body rod protein FlgF [Shigella boydii ATCC 9905]
          Length = 251

 Score = 39.1 bits (89), Expect = 0.20,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 32/102 (31%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           N     +T       +   +    +        +     Q+T          +   SG++
Sbjct: 147 NPGDPANTVAPVGRLKLVKATGSEVQRGDDGIFRLSAETQATRGPVLQADPTLRVMSGVL 206

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NVN +   +DM  + R +   ++ I    D       LL
Sbjct: 207 EGSNVNAVAAMSDMIASARRFEMQMKVISSVDDNAGRANQLL 248


>gi|313639049|gb|EFS04037.1| flagellar hook-associated protein FlgK [Listeria seeligeri FSL
           S4-171]
          Length = 507

 Score = 39.1 bits (89), Expect = 0.20,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 41/111 (36%), Gaps = 10/111 (9%)

Query: 22  MQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGH 81
           + +I+ +IA+ +T  +  G+                 G +        +S+     D   
Sbjct: 407 LGVIAADIASLKTDKNIEGTTF----------PNFMDGIITEVATDASKSSATSTADTQA 456

Query: 82  PVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
             + +        VN+  E  ++ +    Y+AN + +   +DMM   L +L
Sbjct: 457 LSSLSESKSSLEGVNIDEEMTNIMQYQSYYVANTKAMNTVNDMMKALLAML 507


>gi|254932015|ref|ZP_05265374.1| flagellar hook-associated protein FlgK [Listeria monocytogenes
           HPB2262]
 gi|293583567|gb|EFF95599.1| flagellar hook-associated protein FlgK [Listeria monocytogenes
           HPB2262]
 gi|328475667|gb|EGF46416.1| flagellar hook-associated protein FlgK [Listeria monocytogenes 220]
          Length = 506

 Score = 39.1 bits (89), Expect = 0.20,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 20/39 (51%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
            VN+  E  ++ +    Y+AN + +   +DMM   L +L
Sbjct: 468 GVNIDEEMTNIMQYQSYYVANTKAMNTVNDMMKALLAML 506


>gi|78067836|ref|YP_370605.1| flagellar basal body rod protein FlgF [Burkholderia sp. 383]
 gi|77968581|gb|ABB09961.1| conserved hypothetical protein [Burkholderia sp. 383]
          Length = 252

 Score = 39.1 bits (89), Expect = 0.20,   Method: Composition-based stats.
 Identities = 8/47 (17%), Positives = 17/47 (36%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
               ++  NVN +     M +  R +    + I+ +     +   LL
Sbjct: 203 TPNSLEGSNVNPVTAMVAMIDNARAFQLQSKLIQTADQNEQSANQLL 249


>gi|15606898|ref|NP_214279.1| flagellar hook protein FlgE [Aquifex aeolicus VF5]
 gi|6225343|sp|O67711|FLGE_AQUAE RecName: Full=Flagellar hook protein flgE
 gi|2984140|gb|AAC07675.1| flagellar hook protein FlgE [Aquifex aeolicus VF5]
          Length = 482

 Score = 39.1 bits (89), Expect = 0.20,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 15/39 (38%)

Query: 74  VEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
                PG      S +V+  NV++  E  ++    R Y 
Sbjct: 439 PTILLPGGSNKIRSAVVEMSNVDIAKEFINLITAQRTYQ 477



 Score = 37.9 bits (86), Expect = 0.45,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 22/42 (52%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          ++ S + A +G+ V    + + S+N+ANA T G       ++
Sbjct: 1  MLRSFYNAITGMDVSRFALDVTSDNLANANTVGFKKSRPIFQ 42


>gi|47095271|ref|ZP_00232882.1| flagellar hook-associated protein 1-related protein [Listeria
           monocytogenes str. 1/2a F6854]
 gi|254900059|ref|ZP_05259983.1| flagellar hook-associated protein FlgK [Listeria monocytogenes
           J0161]
 gi|254911388|ref|ZP_05261400.1| conserved hypothetical protein [Listeria monocytogenes J2818]
 gi|254935715|ref|ZP_05267412.1| flagellar hook-associated protein FlgK [Listeria monocytogenes
           F6900]
 gi|47016342|gb|EAL07264.1| flagellar hook-associated protein 1-related protein [Listeria
           monocytogenes str. 1/2a F6854]
 gi|258608298|gb|EEW20906.1| flagellar hook-associated protein FlgK [Listeria monocytogenes
           F6900]
 gi|293589325|gb|EFF97659.1| conserved hypothetical protein [Listeria monocytogenes J2818]
          Length = 506

 Score = 39.1 bits (89), Expect = 0.20,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 20/39 (51%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
            VN+  E  ++ +    Y+AN + +   +DMM   L +L
Sbjct: 468 GVNIDEEMTNIMQYQSYYVANTKAMNTVNDMMKALLAML 506


>gi|328555246|gb|AEB25738.1| flagellar hook-associated protein FlgK [Bacillus amyloliquefaciens
           TA208]
 gi|328913607|gb|AEB65203.1| flagellar hook-filament junction [Bacillus amyloliquefaciens LL3]
          Length = 505

 Score = 39.1 bits (89), Expect = 0.20,   Method: Composition-based stats.
 Identities = 17/106 (16%), Positives = 27/106 (25%), Gaps = 6/106 (5%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSD------PYRRKTISFEEV 54
           M         A   L+ Q   +  +S N+ANA T G T          PY   + + +  
Sbjct: 1   MPSTFMGLETARRALSAQQTALSTVSNNVANANTEGYTRQRVTLQSTSPYPAVSKNSDLT 60

Query: 55  MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVE 100
               G                ++                N    +E
Sbjct: 61  AGQIGTGVKAGSVERVRDSFLDYQYRTENTKLGYYTARSNSLSQME 106



 Score = 34.8 bits (78), Expect = 3.9,   Method: Composition-based stats.
 Identities = 6/38 (15%), Positives = 15/38 (39%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             V++  E  +M +    Y A  + I    ++    ++
Sbjct: 461 SAVSLDEEMTNMIQFQHAYNAAARIITMQDEIFDKIIN 498


>gi|295696110|ref|YP_003589348.1| flagellar basal-body rod protein FlgB [Bacillus tusciae DSM 2912]
 gi|295411712|gb|ADG06204.1| flagellar basal-body rod protein FlgB [Bacillus tusciae DSM 2912]
          Length = 135

 Score = 39.1 bits (89), Expect = 0.20,   Method: Composition-based stats.
 Identities = 20/119 (16%), Positives = 37/119 (31%), Gaps = 2/119 (1%)

Query: 14  GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTF 73
            L   + R ++I++N+AN  T G       +               G R           
Sbjct: 15  ALDATALRQKLIADNVANVDTPGYHRQDVRFEDIFAQALAQPAPLAGFRTDPRHFIIGPP 74

Query: 74  VEEF-DPGHPVANASGI-VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
                 P   V + +       NV++  E  ++      Y+  LQ +     M+   L+
Sbjct: 75  PLSQVRPETTVDDQTVYSTNGNNVDMDREMTELAANQTEYLTLLQDVNLQFAMLRYALN 133


>gi|172061971|ref|YP_001809623.1| flagellar basal body rod protein FlgF [Burkholderia ambifaria
           MC40-6]
 gi|171994488|gb|ACB65407.1| flagellar basal-body rod protein FlgF [Burkholderia ambifaria
           MC40-6]
          Length = 252

 Score = 39.1 bits (89), Expect = 0.20,   Method: Composition-based stats.
 Identities = 8/47 (17%), Positives = 17/47 (36%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
               ++  NVN +     M +  R +    + I+ +     +   LL
Sbjct: 203 TPNSLEGSNVNPVTAMVAMIDNARAFQLQSKLIQTADQNEQSANQLL 249


>gi|226944493|ref|YP_002799566.1| flagellar basal-body rod protein [Azotobacter vinelandii DJ]
 gi|226719420|gb|ACO78591.1| flagellar basal-body rod protein [Azotobacter vinelandii DJ]
          Length = 251

 Score = 39.1 bits (89), Expect = 0.20,   Method: Composition-based stats.
 Identities = 11/64 (17%), Positives = 21/64 (32%)

Query: 69  DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
           D +   +           +G ++  NV+       M +  R Y   ++ I  + D     
Sbjct: 184 DDTGVSQPLAVDETARLVTGALEGSNVSATEAMVAMIDNARRYEMQMKAIDSADDNAQRA 243

Query: 129 LDLL 132
             LL
Sbjct: 244 NALL 247


>gi|212709498|ref|ZP_03317626.1| hypothetical protein PROVALCAL_00540 [Providencia alcalifaciens
          DSM 30120]
 gi|212687836|gb|EEB47364.1| hypothetical protein PROVALCAL_00540 [Providencia alcalifaciens
          DSM 30120]
          Length = 546

 Score = 39.1 bits (89), Expect = 0.20,   Method: Composition-based stats.
 Identities = 17/93 (18%), Positives = 29/93 (31%), Gaps = 2/93 (2%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          L    + A SG+      + +IS N+ANA        S  +     +     +   G   
Sbjct: 2  LNNVMNNALSGVNAAQGGLSVISNNLANAGVGYYHRQSAVFGENPGTMTPNGYFGNGTYF 61

Query: 64 KKIGVDQSTFV--EEFDPGHPVANASGIVKYPN 94
            +  +   FV  +         +    VK  N
Sbjct: 62 SHVRREFDEFVNAQYSQSRARSGDYEAYVKNCN 94


>gi|197285509|ref|YP_002151381.1| flagellar basal-body rod protein [Proteus mirabilis HI4320]
 gi|194682996|emb|CAR43444.1| flagellar basal-body rod protein [Proteus mirabilis HI4320]
          Length = 251

 Score = 39.1 bits (89), Expect = 0.20,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 16/43 (37%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           ++  NVN      DM    R +   ++ I  + D       LL
Sbjct: 206 LEGSNVNPAEAMVDMIANARRFEMQMKVIHSADDNAQRANQLL 248


>gi|152980141|ref|YP_001353117.1| flagellar hook-associated protein FlgK [Janthinobacterium sp.
           Marseille]
 gi|151280218|gb|ABR88628.1| FlgK flagellar hook-associated protein [Janthinobacterium sp.
           Marseille]
          Length = 647

 Score = 39.1 bits (89), Expect = 0.20,   Method: Composition-based stats.
 Identities = 16/132 (12%), Positives = 35/132 (26%), Gaps = 3/132 (2%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF-EEVMHGSGGVRV 63
              A I  SG      +  I +    +          +   +  +       + +    V
Sbjct: 516 FGGAEIKISGAPANGDKFTISANTNGDGDNRNMLALGELQTKNVLQGGTASYNSAYSQLV 575

Query: 64  KKIGVDQSTFVEEFDPGHP--VANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
             +G                     +       VN+  E  ++    + Y A+ + ++  
Sbjct: 576 SLVGNKTRELQTNSASEGALLKQMQTAQQSESGVNLDEEATNLLRYQQAYQASGKVMQAV 635

Query: 122 HDMMTTTLDLLR 133
            DM    + L R
Sbjct: 636 SDMFDVLISLGR 647


>gi|310767296|gb|ADP12246.1| flagellar hook-associated protein FlgK [Erwinia sp. Ejp617]
          Length = 551

 Score = 39.1 bits (89), Expect = 0.21,   Method: Composition-based stats.
 Identities = 15/99 (15%), Positives = 36/99 (36%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +    + A SGL+  SA +   S NI N   TG +  +    +   +     +   G  V
Sbjct: 1   MSNLINTAMSGLSASSAALNTTSNNITNYAVTGYSRQTTVLNQSASTLSGGNYYGNGAAV 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETA 102
             +  +   F+ +        +++   +   ++ + +  
Sbjct: 61  SSVYREYDQFINKQLLAASTQSSALSTQAGQMSNIDDMM 99


>gi|262173355|ref|ZP_06041032.1| flagellar basal-body rod protein FlgF [Vibrio mimicus MB-451]
 gi|261890713|gb|EEY36700.1| flagellar basal-body rod protein FlgF [Vibrio mimicus MB-451]
          Length = 243

 Score = 39.1 bits (89), Expect = 0.21,   Method: Composition-based stats.
 Identities = 7/46 (15%), Positives = 18/46 (39%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
              V+  NV+ + E   +    R +   ++ +K +  +      L+
Sbjct: 195 PEHVEGSNVSAVDELLSVMSLTRNFEMQVRMMKSAETLAQAGNKLM 240


>gi|268589981|ref|ZP_06124202.1| flagellar basal-body rod protein FlgF [Providencia rettgeri DSM
           1131]
 gi|291314699|gb|EFE55152.1| flagellar basal-body rod protein FlgF [Providencia rettgeri DSM
           1131]
          Length = 251

 Score = 39.1 bits (89), Expect = 0.21,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 16/43 (37%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           ++  NVN       M    R +   ++ ++ + +       LL
Sbjct: 206 IEGSNVNAAEAMVSMIANARHFEMQMKVVRSADENAQRANQLL 248


>gi|217965197|ref|YP_002350875.1| flagellar hook-associated protein FlgK [Listeria monocytogenes
           HCC23]
 gi|217334467|gb|ACK40261.1| flagellar hook-associated protein FlgK [Listeria monocytogenes
           HCC23]
 gi|307570244|emb|CAR83423.1| flagellar hook-associated protein 1-related protein [Listeria
           monocytogenes L99]
          Length = 506

 Score = 39.1 bits (89), Expect = 0.21,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 20/39 (51%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
            VN+  E  ++ +    Y+AN + +   +DMM   L +L
Sbjct: 468 GVNIDEEMTNIMQYQSYYVANTKAMNTVNDMMKALLAML 506


>gi|254420343|ref|ZP_05034067.1| hypothetical protein BBAL3_2653 [Brevundimonas sp. BAL3]
 gi|196186520|gb|EDX81496.1| hypothetical protein BBAL3_2653 [Brevundimonas sp. BAL3]
          Length = 135

 Score = 39.1 bits (89), Expect = 0.21,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 42/110 (38%), Gaps = 5/110 (4%)

Query: 21  RMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPG 80
           R ++I+EN+ANA T G         ++   F   +   GG++V +               
Sbjct: 22  RQRVIAENVANADTPGY---GGRDLKQPTDFAAALRSGGGLQVVRTNRAHIAPPVSAPRF 78

Query: 81  HPVA--NASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
            P    ++   +   +V V  +   M E+   Y A +   ++S  M+   
Sbjct: 79  DPTKSPDSETTLDGNSVVVEEQMLKMAESRMAYDAAIGFYQKSMSMLRMA 128


>gi|254853091|ref|ZP_05242439.1| flagellar hook-associated protein FlgK [Listeria monocytogenes FSL
           R2-503]
 gi|300764517|ref|ZP_07074510.1| flagellar hook-associated protein 1-related protein [Listeria
           monocytogenes FSL N1-017]
 gi|258606440|gb|EEW19048.1| flagellar hook-associated protein FlgK [Listeria monocytogenes FSL
           R2-503]
 gi|300514871|gb|EFK41925.1| flagellar hook-associated protein 1-related protein [Listeria
           monocytogenes FSL N1-017]
          Length = 506

 Score = 39.1 bits (89), Expect = 0.21,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 20/39 (51%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
            VN+  E  ++ +    Y+AN + +   +DMM   L +L
Sbjct: 468 GVNIDEEMTNIMQYQSYYVANTKAMNTVNDMMKALLAML 506


>gi|224498787|ref|ZP_03667136.1| flagellar hook-associated protein FlgK [Listeria monocytogenes
           Finland 1988]
 gi|254829362|ref|ZP_05234049.1| flagellar hook-associated protein FlgK [Listeria monocytogenes FSL
           N3-165]
 gi|254830304|ref|ZP_05234959.1| flagellar hook-associated protein FlgK [Listeria monocytogenes
           10403S]
 gi|284801035|ref|YP_003412900.1| flagellar hook-associated protein FlgK [Listeria monocytogenes
           08-5578]
 gi|284994177|ref|YP_003415945.1| flagellar hook-associated protein FlgK [Listeria monocytogenes
           08-5923]
 gi|258601775|gb|EEW15100.1| flagellar hook-associated protein FlgK [Listeria monocytogenes FSL
           N3-165]
 gi|284056597|gb|ADB67538.1| flagellar hook-associated protein FlgK [Listeria monocytogenes
           08-5578]
 gi|284059644|gb|ADB70583.1| flagellar hook-associated protein FlgK [Listeria monocytogenes
           08-5923]
          Length = 506

 Score = 39.1 bits (89), Expect = 0.21,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 20/39 (51%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
            VN+  E  ++ +    Y+AN + +   +DMM   L +L
Sbjct: 468 GVNIDEEMTNIMQYQSYYVANTKAMNTVNDMMKALLAML 506


>gi|46906956|ref|YP_013345.1| flagellar hook-associated protein FlgK [Listeria monocytogenes
           serotype 4b str. F2365]
 gi|46880222|gb|AAT03522.1| flagellar hook-associated protein 1-related protein [Listeria
           monocytogenes serotype 4b str. F2365]
          Length = 506

 Score = 39.1 bits (89), Expect = 0.21,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 20/39 (51%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
            VN+  E  ++ +    Y+AN + +   +DMM   L +L
Sbjct: 468 GVNIDEEMTNIMQYQSYYVANTKAMNTVNDMMKALLAML 506


>gi|47091667|ref|ZP_00229463.1| flagellar hook-associated protein 1-related protein [Listeria
           monocytogenes str. 4b H7858]
 gi|47019986|gb|EAL10723.1| flagellar hook-associated protein 1-related protein [Listeria
           monocytogenes str. 4b H7858]
          Length = 494

 Score = 39.1 bits (89), Expect = 0.21,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 20/39 (51%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
            VN+  E  ++ +    Y+AN + +   +DMM   L +L
Sbjct: 456 GVNIDEEMTNIMQYQSYYVANTKAMNTVNDMMKALLAML 494


>gi|117621022|ref|YP_857346.1| flagellar basal-body rod protein FlgB [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|117562429|gb|ABK39377.1| flagellar basal-body rod protein FlgB [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
          Length = 132

 Score = 39.1 bits (89), Expect = 0.21,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 45/124 (36%), Gaps = 2/124 (1%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
            +  I    L+V+S R +++S NIANA T G       + +     ++          +K
Sbjct: 7   KAFGIHQYTLSVRSKRAEVLSSNIANADTPGFKARDINFSQALEEAQQQQGFGLATTSEK 66

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
               Q          +P+   +G      V+V  E ++    +  Y  +L+ +      +
Sbjct: 67  HFALQMDAPGVTQYRNPLQPDTG--DGNTVDVQQERSEFLRNSLEYQTSLEFMNSKISGL 124

Query: 126 TTTL 129
              L
Sbjct: 125 LKAL 128


>gi|107100531|ref|ZP_01364449.1| hypothetical protein PaerPA_01001556 [Pseudomonas aeruginosa PACS2]
 gi|13183733|gb|AAK15324.1|AF332547_1 flagellar hook-associated protein 1 FlgK [Pseudomonas aeruginosa]
          Length = 682

 Score = 39.1 bits (89), Expect = 0.21,   Method: Composition-based stats.
 Identities = 19/123 (15%), Positives = 33/123 (26%), Gaps = 6/123 (4%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +     I  SGL      + I   NI N +T G +      + +   F    +   G ++
Sbjct: 1   MSDLLSIGLSGLGTSQTWLTITGHNITNVKTPGYSRQDAIQQTQVPQFSGAGYMGSGSQI 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET------NRLYMANLQT 117
             +    S F+          N+        +  L        T       R + A    
Sbjct: 61  VDVRRLASDFLTGQLRNATSQNSELSAFRSQIEQLDGLLSNTTTGVSPAMQRFFAALQAA 120

Query: 118 IKQ 120
              
Sbjct: 121 ANN 123


>gi|134297191|ref|YP_001120926.1| flagellar hook-associated protein FlgK [Burkholderia vietnamiensis
           G4]
 gi|134140348|gb|ABO56091.1| flagellar hook-associated protein FlgK [Burkholderia vietnamiensis
           G4]
          Length = 655

 Score = 39.1 bits (89), Expect = 0.21,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 20/39 (51%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN   E A++ +  +LY AN + I+ +  +  T L L
Sbjct: 615 SGVNQNEEAANLMQYQQLYQANAKVIQTAQTLFQTVLGL 653



 Score = 34.1 bits (76), Expect = 6.1,   Method: Composition-based stats.
 Identities = 16/95 (16%), Positives = 31/95 (32%)

Query: 8   AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
            ++  SGL      +    +NI+NA T G +     Y  ++  +    +   GV    + 
Sbjct: 6   MNLGVSGLNAALWGLTTTGQNISNAATPGYSVERPVYAEESGQYTASGYLPQGVNTVTVQ 65

Query: 68  VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETA 102
              S ++ +          +    Y  V  L    
Sbjct: 66  RQYSQYLSDQLNAAQSQGGAQSTWYSLVAQLNNYV 100


>gi|323705449|ref|ZP_08117024.1| flagellar basal-body rod protein FlgB [Thermoanaerobacterium
           xylanolyticum LX-11]
 gi|323535351|gb|EGB25127.1| flagellar basal-body rod protein FlgB [Thermoanaerobacterium
           xylanolyticum LX-11]
          Length = 136

 Score = 39.1 bits (89), Expect = 0.21,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 43/110 (39%), Gaps = 1/110 (0%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
             +  + +  L     R ++IS NIAN  T G       +             +G V  K
Sbjct: 6   FNTVDLMSKALDASELRNEVISNNIANVDTPGFKRSDVNFESILNDAINSNKLTGFVTDK 65

Query: 65  KIGVDQSTFVEEFDPGHPVANASGI-VKYPNVNVLVETADMRETNRLYMA 113
                 ST ++  +P     N++ + +   NV++ VE +++ +    Y A
Sbjct: 66  NHIPINSTSIDNIEPQIVQDNSTSMRLDGNNVDIDVEMSNLAKNQLYYDA 115


>gi|321313088|ref|YP_004205375.1| flagellar hook-associated protein FlgK [Bacillus subtilis BSn5]
 gi|320019362|gb|ADV94348.1| flagellar hook-associated protein FlgK [Bacillus subtilis BSn5]
          Length = 507

 Score = 39.1 bits (89), Expect = 0.21,   Method: Composition-based stats.
 Identities = 12/101 (11%), Positives = 30/101 (29%), Gaps = 1/101 (0%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGI- 89
           NA  T                  V+    G+  +     Q       +    + +A    
Sbjct: 400 NANATKLANVLTGKITINGKETSVLDYYAGLIGELGIEAQEANRLASNTETQLNDADINR 459

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            +   V++  E  +M +    Y A  + +    +++   ++
Sbjct: 460 QQMSAVSLDEEMTNMIQFQHAYNAAARMVTLQDELLDKVIN 500



 Score = 38.3 bits (87), Expect = 0.40,   Method: Composition-based stats.
 Identities = 20/95 (21%), Positives = 31/95 (32%), Gaps = 5/95 (5%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTP-----GSDPYRRKTISFEEVM 55
          M         A   L+ Q A +   + N+ANA T G T       +  Y        E  
Sbjct: 1  MTSTFMGLETARRALSAQQAALSTTANNVANANTDGYTRQRVSLEATDYFPAVSKNAEKT 60

Query: 56 HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           G  G  V+   V++   +          N++G  
Sbjct: 61 AGQMGTGVQGKSVERIRDIFLDYQYRLQNNSAGYY 95


>gi|110632662|ref|YP_672870.1| flagellar basal body rod protein FlgF [Mesorhizobium sp. BNC1]
 gi|110283646|gb|ABG61705.1| flagellar basal body rod protein [Chelativorans sp. BNC1]
          Length = 239

 Score = 39.1 bits (89), Expect = 0.21,   Method: Composition-based stats.
 Identities = 11/62 (17%), Positives = 21/62 (33%), Gaps = 2/62 (3%)

Query: 69  DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
           D         P   +A   G ++  NVN + E   + +  R +      ++ S   M   
Sbjct: 176 DTRPQPVVDQPDVGIA--QGFLEDSNVNPVNEMMRLIQVQRTFEQVTALMRDSDTSMKDA 233

Query: 129 LD 130
           + 
Sbjct: 234 IQ 235


>gi|241589577|ref|YP_002979602.1| flagellar hook-associated protein FlgK [Ralstonia pickettii 12D]
 gi|240868289|gb|ACS65948.1| flagellar hook-associated protein FlgK [Ralstonia pickettii 12D]
          Length = 641

 Score = 39.1 bits (89), Expect = 0.21,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 21/59 (35%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
           +I  SGL      +Q+I  NIAN  T G +            +  V     G  V  +
Sbjct: 6  LNIGASGLRTAGIHLQVIGSNIANVNTPGYSRQEVVQTENPPHYGGVGDLGQGANVATV 64



 Score = 38.7 bits (88), Expect = 0.31,   Method: Composition-based stats.
 Identities = 18/131 (13%), Positives = 43/131 (32%), Gaps = 5/131 (3%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV- 63
               H+  +G        ++ S N+AN+  +G+       R  ++     +         
Sbjct: 509 FNGIHMMMTGAPANGDTFKL-SPNVANSTDSGNASTLAKLRNASLLDGGTVSVGAAWHNL 567

Query: 64  ---KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
                I   Q+            +  S       VN+  E   + +  + Y A+ + ++ 
Sbjct: 568 VTQVGIQAHQAAGNLTSQTVLHRSAVSQQQAVSGVNLDEEAMKLMQYQKAYQASAKVMQT 627

Query: 121 SHDMMTTTLDL 131
           ++ +  T L +
Sbjct: 628 ANSLFDTLLSM 638


>gi|146307868|ref|YP_001188333.1| flagellar basal body rod protein FlgF [Pseudomonas mendocina ymp]
 gi|145576069|gb|ABP85601.1| flagellar basal-body rod protein FlgF [Pseudomonas mendocina ymp]
          Length = 246

 Score = 39.1 bits (89), Expect = 0.21,   Method: Composition-based stats.
 Identities = 11/60 (18%), Positives = 27/60 (45%)

Query: 74  VEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             E +    V   SG ++  NVN + E   +   +R +  +++ ++ + D  +    +L+
Sbjct: 185 QPEVEADATVQVTSGFLEASNVNAVEEMTAILSLSRQFELSVKMMRTAEDNASAMARVLQ 244


>gi|16802747|ref|NP_464232.1| flagellar hook-associated protein FlgK [Listeria monocytogenes
           EGD-e]
 gi|224501990|ref|ZP_03670297.1| flagellar hook-associated protein FlgK [Listeria monocytogenes FSL
           R2-561]
 gi|16410094|emb|CAC98783.1| lmo0705 [Listeria monocytogenes EGD-e]
          Length = 506

 Score = 39.1 bits (89), Expect = 0.21,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 20/39 (51%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
            VN+  E  ++ +    Y+AN + +   +DMM   L +L
Sbjct: 468 GVNIDEEMTNIMQYQSYYVANTKAMNTVNDMMKALLAML 506


>gi|332980933|ref|YP_004462374.1| flagellar hook-basal body protein [Mahella australiensis 50-1 BON]
 gi|332698611|gb|AEE95552.1| flagellar hook-basal body protein [Mahella australiensis 50-1 BON]
          Length = 262

 Score = 39.1 bits (89), Expect = 0.22,   Method: Composition-based stats.
 Identities = 13/98 (13%), Positives = 28/98 (28%), Gaps = 1/98 (1%)

Query: 33  RTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKY 92
                T          +   +    +       + V       +  P        G ++ 
Sbjct: 161 AGNIYTDQRQYAGTIAVEDFDNRDDALEKAGDNLYVVYDPEQYQSHPVGT-GIKQGHIEV 219

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            NV++  E  DM E  R Y +  + +      +  T++
Sbjct: 220 SNVDINKEITDMMEVYRHYESAQRIVSMLDQTLDKTVN 257


>gi|294339836|emb|CAZ88199.1| putative flagellar hook-associated protein FlgK [Thiomonas sp.
          3As]
          Length = 667

 Score = 39.1 bits (89), Expect = 0.22,   Method: Composition-based stats.
 Identities = 14/66 (21%), Positives = 26/66 (39%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  +    + A +GL    + +Q+   NIAN  T G +  +      T S     +   G
Sbjct: 1  MSGISGLLNNALTGLQAAQSALQVTGNNIANVNTPGYSRETAVQSTLTPSLYGGQYLGNG 60

Query: 61 VRVKKI 66
           ++  +
Sbjct: 61 TQIDAV 66


>gi|254251198|ref|ZP_04944516.1| Flagellar hook-associated protein [Burkholderia dolosa AUO158]
 gi|124893807|gb|EAY67687.1| Flagellar hook-associated protein [Burkholderia dolosa AUO158]
          Length = 655

 Score = 39.1 bits (89), Expect = 0.22,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 19/39 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN   E A++ +  + Y AN + I+ +  +  T L L
Sbjct: 615 SGVNQNEEAANLMQYQQYYQANAKVIQTAATLFQTVLGL 653


>gi|330945585|gb|EGH47092.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv.
           pisi str. 1704B]
          Length = 153

 Score = 39.1 bits (89), Expect = 0.22,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 23/56 (41%), Gaps = 3/56 (5%)

Query: 80  GHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS---HDMMTTTLDLL 132
              V   SG ++  NVN + E   +   +R +  +++ +K +      M   L L 
Sbjct: 98  DATVQVESGFLQASNVNAVEEMTSVLALSRQFELHVKMMKTAEEDDQSMARVLQLG 153


>gi|291486094|dbj|BAI87169.1| flagellar hook-associated protein FlgK [Bacillus subtilis subsp.
           natto BEST195]
          Length = 507

 Score = 39.1 bits (89), Expect = 0.22,   Method: Composition-based stats.
 Identities = 12/101 (11%), Positives = 30/101 (29%), Gaps = 1/101 (0%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGI- 89
           NA  T                  V+    G+  +     Q       +    + +A    
Sbjct: 400 NANATKLANVLTGKITINGKETSVLDYYAGLIGELGIEAQEANRLASNTETQLNDADINR 459

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            +   V++  E  +M +    Y A  + +    +++   ++
Sbjct: 460 QQMSAVSLDEEMTNMIQFQHAYNAAARMVTLQDELLDKVIN 500



 Score = 37.9 bits (86), Expect = 0.41,   Method: Composition-based stats.
 Identities = 20/95 (21%), Positives = 31/95 (32%), Gaps = 5/95 (5%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTP-----GSDPYRRKTISFEEVM 55
          M         A   L+ Q A +   + N+ANA T G T       +  Y        E  
Sbjct: 1  MTSTFMGLETARRALSAQQAALSTTANNVANANTDGYTRQRVSLEATDYFPAVSKNAEKT 60

Query: 56 HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           G  G  V+   V++   +          N++G  
Sbjct: 61 AGQMGTGVQGKSVERIRDIFLDYQYRLQNNSAGYY 95


>gi|261344136|ref|ZP_05971780.1| flagellar hook-associated protein FlgK [Providencia rustigianii
          DSM 4541]
 gi|282567728|gb|EFB73263.1| flagellar hook-associated protein FlgK [Providencia rustigianii
          DSM 4541]
          Length = 547

 Score = 39.1 bits (89), Expect = 0.22,   Method: Composition-based stats.
 Identities = 17/93 (18%), Positives = 29/93 (31%), Gaps = 2/93 (2%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          L    + A SG+      + +IS N+ANA        S  +     +     +   G   
Sbjct: 2  LNNVMNNALSGVNAAQGGLSVISNNLANAGVGYYHRQSAVFGENPGTMTPNGYFGNGTYF 61

Query: 64 KKIGVDQSTFV--EEFDPGHPVANASGIVKYPN 94
            +  +   FV  +         +    VK  N
Sbjct: 62 SHVRREFDEFVNAQYSQSRARSGDYEAYVKNCN 94


>gi|221640830|ref|YP_002527092.1| flagellar basal body rod protein FlgB [Rhodobacter sphaeroides
           KD131]
 gi|221161611|gb|ACM02591.1| Flagellar basal-body rod protein FlgB [Rhodobacter sphaeroides
           KD131]
          Length = 127

 Score = 39.1 bits (89), Expect = 0.22,   Method: Composition-based stats.
 Identities = 22/134 (16%), Positives = 42/134 (31%), Gaps = 8/134 (5%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M   +    +A S       R ++++ N+ANA T G      P      S    +  +  
Sbjct: 1   MFEKLEIVRMAQSMARHAGLRTEVVAHNLANADTPGYRAQDLPDFESYASGTVGLRTTRP 60

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
             ++      +  V     G    N +       V++  E        + +   L   + 
Sbjct: 61  GHLRSAEATAADPVPVEGRGAASPNGNT------VSLEDEMVRAVAARQQHEMALAIYQS 114

Query: 121 SHDMMTTTLDLLRD 134
           S  ++ T   L R 
Sbjct: 115 SSRLIRT--SLGRS 126


>gi|254466371|ref|ZP_05079782.1| flagellar basal-body rod protein FlgF [Rhodobacterales bacterium
           Y4I]
 gi|206687279|gb|EDZ47761.1| flagellar basal-body rod protein FlgF [Rhodobacterales bacterium
           Y4I]
          Length = 238

 Score = 39.1 bits (89), Expect = 0.22,   Method: Composition-based stats.
 Identities = 9/49 (18%), Positives = 22/49 (44%), Gaps = 1/49 (2%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL-DLLRD 134
            G ++  NVN + E + M +  R Y      ++   + +   + +L++ 
Sbjct: 190 QGFLEGSNVNAISEVSRMIDVQRAYEMGQSFLQTEDERIRNAIKNLIKS 238


>gi|292492369|ref|YP_003527808.1| flagellar hook-associated protein FlgK [Nitrosococcus halophilus
           Nc4]
 gi|291580964|gb|ADE15421.1| flagellar hook-associated protein FlgK [Nitrosococcus halophilus
           Nc4]
          Length = 647

 Score = 39.1 bits (89), Expect = 0.22,   Method: Composition-based stats.
 Identities = 17/110 (15%), Positives = 33/110 (30%), Gaps = 4/110 (3%)

Query: 24  IISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPV 83
           +I  N        +       + ++    E            + V   T   E +     
Sbjct: 533 VIHNNTGGVSDNRNALAIAGLQTESSLQGETATYQEHYSRLVVDVGVRTRQAEVNRDTSG 592

Query: 84  ANASGIVKY----PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
           A     V+       VN+  E A++    + + A  + I  + DM  + L
Sbjct: 593 ALLDQAVEAREGVSGVNLEEEAANLLRFQQAFQAAARVISVADDMFQSLL 642



 Score = 36.4 bits (82), Expect = 1.3,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 20/72 (27%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
            I  SGL      +   S NIAN  T G +                     GV V  + 
Sbjct: 7  LSIGLSGLLAMQRSLATTSHNIANVNTPGFSRQRTELSASLPESTAKGFIGTGVNVATVR 66

Query: 68 VDQSTFVEEFDP 79
               F+ E   
Sbjct: 67 RAYDAFLTEQVQ 78


>gi|253990126|ref|YP_003041482.1| flagellar basal-body rod protein flgf [Photorhabdus asymbiotica
           subsp. asymbiotica ATCC 43949]
 gi|253781576|emb|CAQ84739.1| flagellar basal-body rod protein flgf (putative proximal rod
           protein) [Photorhabdus asymbiotica]
          Length = 251

 Score = 39.1 bits (89), Expect = 0.22,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 18/47 (38%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
             G ++  NVN +     M +  R +   ++ I  S +       LL
Sbjct: 202 MPGTLEGSNVNPMESMVSMIDNARRFEMQMKVIHSSDENAQRANQLL 248


>gi|226223336|ref|YP_002757443.1| flagellar hook-associated protein FlgK [Listeria monocytogenes
           Clip81459]
 gi|254824015|ref|ZP_05229016.1| flagellar hook-associated protein FlgK [Listeria monocytogenes FSL
           J1-194]
 gi|225875798|emb|CAS04501.1| Putative flagellar hook-associated protein FlgK [Listeria
           monocytogenes serotype 4b str. CLIP 80459]
 gi|293593243|gb|EFG01004.1| flagellar hook-associated protein FlgK [Listeria monocytogenes FSL
           J1-194]
          Length = 506

 Score = 39.1 bits (89), Expect = 0.22,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 20/39 (51%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
            VN+  E  ++ +    Y+AN + +   +DMM   L +L
Sbjct: 468 GVNIDEEMTNIMQYQSYYVANTKAMNTVNDMMKALLAML 506


>gi|91201245|emb|CAJ74305.1| similar to flagellar hook-associated protein FlgK [Candidatus
           Kuenenia stuttgartiensis]
          Length = 653

 Score = 39.1 bits (89), Expect = 0.22,   Method: Composition-based stats.
 Identities = 8/40 (20%), Positives = 17/40 (42%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           +   VN+  E   +    + Y A+ + I     ++ T L+
Sbjct: 612 EVSGVNIDEELVTLIRFQQAYQASAKYISTVDRLINTLLN 651



 Score = 34.1 bits (76), Expect = 7.6,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 25/66 (37%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
            I  SG+      M + + NI+NA T G T  +     +      +     GV + KI 
Sbjct: 6  IQIGMSGVLAAQRAMMVSAHNISNANTKGYTKQTVSLATRLPLQTTIGSIGQGVDLVKIM 65

Query: 68 VDQSTF 73
            +  +
Sbjct: 66 RQKDDY 71


>gi|183598618|ref|ZP_02960111.1| hypothetical protein PROSTU_02018 [Providencia stuartii ATCC 25827]
 gi|188020797|gb|EDU58837.1| hypothetical protein PROSTU_02018 [Providencia stuartii ATCC 25827]
          Length = 251

 Score = 39.1 bits (89), Expect = 0.22,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 16/43 (37%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           ++  NVN       M    R +   ++ ++ + +       LL
Sbjct: 206 IEGSNVNAAEAMVSMIANARYFEMQMKVVRSADENAQKANQLL 248


>gi|289433983|ref|YP_003463855.1| flagellar hook-associated protein 1-related protein [Listeria
           seeligeri serovar 1/2b str. SLCC3954]
 gi|289170227|emb|CBH26767.1| flagellar hook-associated protein 1-related protein [Listeria
           seeligeri serovar 1/2b str. SLCC3954]
          Length = 507

 Score = 39.1 bits (89), Expect = 0.22,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 41/111 (36%), Gaps = 10/111 (9%)

Query: 22  MQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGH 81
           + +I+ +IA+ +T  +  G+                 G +        +S+     D   
Sbjct: 407 LGVIAADIASLKTDKNIEGTTF----------PNFMDGLITEVATDASKSSATSTADTQA 456

Query: 82  PVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
             + +        VN+  E  ++ +    Y+AN + +   +DMM   L +L
Sbjct: 457 LSSLSESKSSLEGVNIDEEMTNIMQYQSYYVANTKAMNTVNDMMKALLAML 507


>gi|167567751|ref|ZP_02360667.1| flagellar basal-body rod protein FlgF [Burkholderia oklahomensis
           EO147]
 gi|167574702|ref|ZP_02367576.1| flagellar basal-body rod protein FlgF [Burkholderia oklahomensis
           C6786]
          Length = 242

 Score = 39.1 bits (89), Expect = 0.22,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 19/46 (41%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           G ++  NV+ + E       NR +   ++    + DM      L+R
Sbjct: 196 GHLERSNVSPVDEMTSTMALNRAFEVQMRLYNAAGDMADAGNRLIR 241


>gi|16080594|ref|NP_391421.1| flagellar hook-associated protein FlgK [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221311492|ref|ZP_03593339.1| flagellar hook-associated protein FlgK [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221315819|ref|ZP_03597624.1| flagellar hook-associated protein FlgK [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221320734|ref|ZP_03602028.1| flagellar hook-associated protein FlgK [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221325019|ref|ZP_03606313.1| flagellar hook-associated protein FlgK [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|2828498|sp|P39810|FLGK_BACSU RecName: Full=Flagellar hook-associated protein 1; Short=HAP1
 gi|1762338|gb|AAC44946.1| flagellar-hook associated protein 1 (HAP1) [Bacillus subtilis
           subsp. subtilis str. 168]
 gi|2636067|emb|CAB15558.1| flagellar hook-filament junction [Bacillus subtilis subsp. subtilis
           str. 168]
          Length = 507

 Score = 39.1 bits (89), Expect = 0.22,   Method: Composition-based stats.
 Identities = 12/101 (11%), Positives = 30/101 (29%), Gaps = 1/101 (0%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGI- 89
           NA  T                  V+    G+  +     Q       +    + +A    
Sbjct: 400 NANATKLANVLTGKITINGKETSVLDYYAGLIGELGIEAQEANRLASNTETQLNDADINR 459

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            +   V++  E  +M +    Y A  + +    +++   ++
Sbjct: 460 QQMSAVSLDEEMTNMIQFQHAYNAAARMVTLQDELLDKVIN 500



 Score = 37.9 bits (86), Expect = 0.42,   Method: Composition-based stats.
 Identities = 20/95 (21%), Positives = 31/95 (32%), Gaps = 5/95 (5%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTP-----GSDPYRRKTISFEEVM 55
          M         A   L+ Q A +   + N+ANA T G T       +  Y        E  
Sbjct: 1  MTSTFMGLETARRALSAQQAALSTTANNVANANTDGYTRQRVSLEATDYFPAVSKNAEKT 60

Query: 56 HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           G  G  V+   V++   +          N++G  
Sbjct: 61 AGQMGTGVQGKSVERIRDIFLDYQYRLQNNSAGYY 95


>gi|16799788|ref|NP_470056.1| flagellar hook-associated protein FlgK [Listeria innocua Clip11262]
 gi|16413165|emb|CAC95945.1| lin0713 [Listeria innocua Clip11262]
          Length = 506

 Score = 39.1 bits (89), Expect = 0.22,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 20/39 (51%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
            VN+  E  ++ +    Y+AN + +   +DMM   L +L
Sbjct: 468 GVNIDEEMTNIMQYQSYYVANTKAMNTVNDMMKALLAML 506


>gi|88813660|ref|ZP_01128889.1| hypothetical protein NB231_05371 [Nitrococcus mobilis Nb-231]
 gi|88789078|gb|EAR20216.1| hypothetical protein NB231_05371 [Nitrococcus mobilis Nb-231]
          Length = 652

 Score = 39.1 bits (89), Expect = 0.22,   Method: Composition-based stats.
 Identities = 20/102 (19%), Positives = 32/102 (31%), Gaps = 7/102 (6%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +      + SGL      +   + NIAN  T G       Y R+            G   
Sbjct: 1   MGDLFDNSISGLLAFQRAINTTAHNIANVNTAG-------YSRQRTELTARAPTEFGNGF 53

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
              GV  ++    F+    VA  +   +Y  +  L E +   
Sbjct: 54  VGNGVQAASTNRLFNQTRQVAVQTSSAEYQRLETLAEYSGRI 95


>gi|193069514|ref|ZP_03050468.1| flagellar basal-body rod protein FlgF [Escherichia coli E110019]
 gi|192957262|gb|EDV87711.1| flagellar basal-body rod protein FlgF [Escherichia coli E110019]
          Length = 251

 Score = 39.1 bits (89), Expect = 0.22,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 32/102 (31%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           N     +T       +   +    +        +     Q+T          +   SG++
Sbjct: 147 NPGDPANTVAPVGRLKLVKATGSEVQRGDDGIFRLSAETQATRGPILQADPTLRVMSGVL 206

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NVN +   +DM  + R +   ++ I    D       LL
Sbjct: 207 EGSNVNAVAAMSDMIASARRFEMQMKVISSVDDNAGRANQLL 248


>gi|315281368|ref|ZP_07870006.1| flagellar hook-associated protein FlgK [Listeria marthii FSL
           S4-120]
 gi|313614985|gb|EFR88491.1| flagellar hook-associated protein FlgK [Listeria marthii FSL
           S4-120]
          Length = 506

 Score = 39.1 bits (89), Expect = 0.22,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 20/39 (51%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
            VN+  E  ++ +    Y+AN + +   +DMM   L +L
Sbjct: 468 GVNIDEEMTNIMQYQSYYVANTKAMNTVNDMMKALLAML 506


>gi|295706288|ref|YP_003599363.1| flagellar basal-body rod protein FlgB [Bacillus megaterium DSM 319]
 gi|294803947|gb|ADF41013.1| flagellar basal-body rod protein FlgB [Bacillus megaterium DSM 319]
          Length = 129

 Score = 39.1 bits (89), Expect = 0.22,   Method: Composition-based stats.
 Identities = 25/113 (22%), Positives = 40/113 (35%), Gaps = 4/113 (3%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M     +     +G++  S + Q I++NIAN  T      +     +          +  
Sbjct: 1   MSLFSTTFQTIENGISYASQKQQTIAQNIANVDTPNYKSKTVTRTSEFRDLLHNELEAYQ 60

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
              K I    S+       G+    A+G     NV++  E ADM E    Y A
Sbjct: 61  TDSKHIPFSDSSQRVITQQGNTSYQANGN----NVDMDKEMADMAENQIYYEA 109


>gi|262173360|ref|ZP_06041037.1| flagellar hook-associated protein FlgK [Vibrio mimicus MB-451]
 gi|261890718|gb|EEY36705.1| flagellar hook-associated protein FlgK [Vibrio mimicus MB-451]
          Length = 457

 Score = 39.1 bits (89), Expect = 0.22,   Method: Composition-based stats.
 Identities = 15/69 (21%), Positives = 24/69 (34%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          +   +IA SGL      + + ++N+AN  T G +              E      GV V 
Sbjct: 1  MNIVNIALSGLNANRVALDVTAQNVANINTPGFSRQQAIMTSVGGGKYENHRPGMGVEVN 60

Query: 65 KIGVDQSTF 73
           +      F
Sbjct: 61 SVRRITDQF 69



 Score = 36.0 bits (81), Expect = 1.8,   Method: Composition-based stats.
 Identities = 16/83 (19%), Positives = 27/83 (32%), Gaps = 2/83 (2%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
           IS  +      G    K     S +            +   V    VN   E A++    
Sbjct: 376 ISINDAFTSMVGETAIKARQADSDYQTRTSMNQQAIESRNNV--SAVNSDEEAANLMTFA 433

Query: 109 RLYMANLQTIKQSHDMMTTTLDL 131
             Y AN++ I  ++ +  + L L
Sbjct: 434 NAYNANMKVISTANQLFDSVLQL 456


>gi|194016593|ref|ZP_03055207.1| flagellar hook-basal body complex protein FlhO [Bacillus pumilus
           ATCC 7061]
 gi|194012066|gb|EDW21634.1| flagellar hook-basal body complex protein FlhO [Bacillus pumilus
           ATCC 7061]
          Length = 279

 Score = 39.1 bits (89), Expect = 0.22,   Method: Composition-based stats.
 Identities = 20/132 (15%), Positives = 45/132 (34%), Gaps = 4/132 (3%)

Query: 6   ASAHIANSGL-AVQSARMQIISENIA-NARTTGDTPGSDPYRRKTISFEEVMHGSG-GVR 62
               I    L +V    + + SEN   NA  T    G +  +       +  + +  G  
Sbjct: 146 NQLTINGRALLSVTGQPITVQSENFKVNADGTVSENGQNLGQIDVRVAMDTRNLAREGND 205

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
           + +   +Q       +       + G+ +  NV+V     +M    R +  N + ++   
Sbjct: 206 LYRTADNQPLPSAVNNGQMSYTLSQGVSELSNVDVTKSYTEMTTAYRAFETNQKVVQAYD 265

Query: 123 DMMTTTLD-LLR 133
             +   ++ + R
Sbjct: 266 KSLEKAVNEIGR 277



 Score = 36.4 bits (82), Expect = 1.5,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 21/55 (38%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
          ++   + A S +  Q  R +++S NIANA T G        R         M   
Sbjct: 1  MLKGLYTATSAMIAQERRTEMLSNNIANANTPGYKADEGTMRAFPEMLLSRMESG 55


>gi|296531728|ref|ZP_06894556.1| flagellar basal-body rod protein FlgF [Roseomonas cervicalis ATCC
           49957]
 gi|296267944|gb|EFH13743.1| flagellar basal-body rod protein FlgF [Roseomonas cervicalis ATCC
           49957]
          Length = 252

 Score = 39.1 bits (89), Expect = 0.23,   Method: Composition-based stats.
 Identities = 17/104 (16%), Positives = 33/104 (31%), Gaps = 3/104 (2%)

Query: 30  ANARTTGDTPGSDPYR---RKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANA 86
           AN      + G              +       G  + +I  +    V+   PG  V  A
Sbjct: 143 ANGNILVTSEGRVEQAGCIALYAGGDMRGLRKSGDGLFEIPAESVQPVDPDAPGTRVRLA 202

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            G ++   V  + E A++    R Y +  + I      +   ++
Sbjct: 203 QGALEGSTVQTVSELANLALVQRAYESMQRIISDDDSRIRRLIE 246


>gi|323527706|ref|YP_004229859.1| flagellar hook-associated protein FlgK [Burkholderia sp. CCGE1001]
 gi|323384708|gb|ADX56799.1| flagellar hook-associated protein FlgK [Burkholderia sp. CCGE1001]
          Length = 657

 Score = 39.1 bits (89), Expect = 0.23,   Method: Composition-based stats.
 Identities = 23/132 (17%), Positives = 49/132 (37%), Gaps = 3/132 (2%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV-MHGSGGVRV 63
           + +  +  SG+     +  I     AN         S+    K+++   V + G+    V
Sbjct: 526 MNNVSVTISGVPAAGDKFTIGPNTGANNDGRNALALSNLSTAKSMNGGTVTLTGAYANYV 585

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYP--NVNVLVETADMRETNRLYMANLQTIKQS 121
            +IG   +           +       +     VN+  E A++ +  +LY AN + I+ +
Sbjct: 586 NEIGNQTNQIQTASTAQASLVTQITTAQQSVSGVNINEEAANLLQYQQLYQANSKVIQTA 645

Query: 122 HDMMTTTLDLLR 133
             +  T L + +
Sbjct: 646 QTLFQTLLGIFQ 657


>gi|238764393|ref|ZP_04625343.1| Flagellar basal-body rod protein flgF [Yersinia kristensenii ATCC
           33638]
 gi|238697419|gb|EEP90186.1| Flagellar basal-body rod protein flgF [Yersinia kristensenii ATCC
           33638]
          Length = 251

 Score = 39.1 bits (89), Expect = 0.23,   Method: Composition-based stats.
 Identities = 13/102 (12%), Positives = 29/102 (28%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           NA  + +T       ++  +    +              Q     +      +    G++
Sbjct: 147 NAGDSPNTIAQLGQIKRVRATAGEVMHGDDGLFHLTPETQQARGAQLANDPLIKVMPGVL 206

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NV  +    DM    R +   ++ I    +       LL
Sbjct: 207 EGSNVKAVEAMTDMIANARSFEMQMKVIHSVDENEQRANQLL 248


>gi|312884828|ref|ZP_07744520.1| flagellar hook-associated protein FlgK [Vibrio caribbenthicus
          ATCC BAA-2122]
 gi|309367480|gb|EFP95040.1| flagellar hook-associated protein FlgK [Vibrio caribbenthicus
          ATCC BAA-2122]
          Length = 457

 Score = 39.1 bits (89), Expect = 0.23,   Method: Composition-based stats.
 Identities = 13/69 (18%), Positives = 24/69 (34%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          +   +I  +GL      + + ++N+AN  T G +              + +    GV V 
Sbjct: 1  MNLVNIGLTGLNASRVALDVTAQNVANINTPGYSRQQALMASVGGPKHDKLSAGAGVEVP 60

Query: 65 KIGVDQSTF 73
           I      F
Sbjct: 61 SIRRISDEF 69


>gi|296122953|ref|YP_003630731.1| flagellar hook-associated protein FlgK [Planctomyces limnophilus
           DSM 3776]
 gi|296015293|gb|ADG68532.1| flagellar hook-associated protein FlgK [Planctomyces limnophilus
           DSM 3776]
          Length = 566

 Score = 39.1 bits (89), Expect = 0.23,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 19/39 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             V++  ET ++    R Y A+ + I    ++  T L++
Sbjct: 528 SGVSLDEETLNILNLQRTYQASARIISVVDELFNTLLNI 566


>gi|154687656|ref|YP_001422817.1| flagellar hook-associated protein FlgK [Bacillus amyloliquefaciens
           FZB42]
 gi|154353507|gb|ABS75586.1| FlgK [Bacillus amyloliquefaciens FZB42]
          Length = 505

 Score = 39.1 bits (89), Expect = 0.23,   Method: Composition-based stats.
 Identities = 17/106 (16%), Positives = 27/106 (25%), Gaps = 6/106 (5%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSD------PYRRKTISFEEV 54
           M         A   L+ Q   +  +S N+ANA T G T          PY   + + +  
Sbjct: 1   MPSTFMGLETARRALSAQQTALSTVSNNVANANTEGYTRQRVTLQSTSPYPAVSKNSDLT 60

Query: 55  MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVE 100
               G                ++                N    +E
Sbjct: 61  AGQIGTGVKAGSVERVRDSFLDYQYRTENTKLGYYTARSNSLSQME 106



 Score = 34.8 bits (78), Expect = 4.3,   Method: Composition-based stats.
 Identities = 6/38 (15%), Positives = 15/38 (39%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             V++  E  +M +    Y A  + I    ++    ++
Sbjct: 461 SAVSLDEEMTNMIQFQHAYNAAARIITMQDEIFDKIIN 498


>gi|170722890|ref|YP_001750578.1| flagellar basal body rod protein FlgF [Pseudomonas putida W619]
 gi|169760893|gb|ACA74209.1| flagellar basal-body rod protein FlgF [Pseudomonas putida W619]
          Length = 248

 Score = 39.1 bits (89), Expect = 0.23,   Method: Composition-based stats.
 Identities = 10/49 (20%), Positives = 22/49 (44%), Gaps = 3/49 (6%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS---HDMMTTTLDLL 132
           SG ++  NVN + E   +   +R +  +++ +  +    + M   L L 
Sbjct: 200 SGFLEGSNVNAVEEMTSVLALSRQFELHVKMMNAAKEGDEAMARVLQLG 248


>gi|94312670|ref|YP_585879.1| flagellar basal body proximal rod protein [Cupriavidus
           metallidurans CH34]
 gi|93356522|gb|ABF10610.1| flagellar basal body proximal rod protein [Cupriavidus
           metallidurans CH34]
          Length = 247

 Score = 39.1 bits (89), Expect = 0.23,   Method: Composition-based stats.
 Identities = 12/64 (18%), Positives = 22/64 (34%)

Query: 71  STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
              V+       V   SG ++  NVN +    +M    R +   ++ I  +         
Sbjct: 183 RPGVDPLQQDPNVRVISGALEGSNVNPVESMVEMIANARRFEMQMKMITGADSNDQRANA 242

Query: 131 LLRD 134
           LL +
Sbjct: 243 LLSN 246


>gi|325274792|ref|ZP_08140821.1| flagellar hook-associated protein FlgK [Pseudomonas sp. TJI-51]
 gi|324100073|gb|EGB97890.1| flagellar hook-associated protein FlgK [Pseudomonas sp. TJI-51]
          Length = 680

 Score = 39.1 bits (89), Expect = 0.23,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 23/68 (33%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          + +   I  SGL    A + + S NIANA T+G +                     G  +
Sbjct: 1  MSSLISIGLSGLNASQAALSVTSNNIANAATSGYSRQQTLQAAGPSHNIGAGFLGTGTTL 60

Query: 64 KKIGVDQS 71
            +    S
Sbjct: 61 ADVRRIYS 68


>gi|290894002|ref|ZP_06556977.1| flagellar hook-associated protein FlgK [Listeria monocytogenes FSL
           J2-071]
 gi|290556448|gb|EFD89987.1| flagellar hook-associated protein FlgK [Listeria monocytogenes FSL
           J2-071]
          Length = 506

 Score = 39.1 bits (89), Expect = 0.23,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 20/39 (51%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
            VN+  E  ++ +    Y+AN + +   +DMM   L +L
Sbjct: 468 GVNIDEEMTNIMQYQSYYVANTKAMNTVNDMMKALLAML 506


>gi|158422269|ref|YP_001523561.1| flagellar basal body rod protein FlgF [Azorhizobium caulinodans ORS
           571]
 gi|158329158|dbj|BAF86643.1| flagellar basal body rod protein [Azorhizobium caulinodans ORS 571]
          Length = 240

 Score = 39.1 bits (89), Expect = 0.23,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 18/44 (40%)

Query: 80  GHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
            +  A   G V+  NV+ ++E   +    R + +  Q I Q   
Sbjct: 185 YNSNAIRQGYVEGSNVDPVMEMTRLIMVQRAFESAAQAISQQET 228



 Score = 36.8 bits (83), Expect = 1.0,   Method: Composition-based stats.
 Identities = 13/86 (15%), Positives = 19/86 (22%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +    ++A SG      RM  I+ N+AN  T G       +                   
Sbjct: 1  MSNGLYVALSGQMATEKRMATIANNVANMNTPGYRAEEIKFSSIMAEQGAKDIKFASTGE 60

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGI 89
                         P        G 
Sbjct: 61 SYTSRRAGPITYTNSPYDVAVQGKGW 86


>gi|103488388|ref|YP_617949.1| flagellar basal-body rod FlgF [Sphingopyxis alaskensis RB2256]
 gi|98978465|gb|ABF54616.1| Flagellar basal-body rod FlgF [Sphingopyxis alaskensis RB2256]
          Length = 247

 Score = 39.1 bits (89), Expect = 0.23,   Method: Composition-based stats.
 Identities = 19/95 (20%), Positives = 34/95 (35%), Gaps = 1/95 (1%)

Query: 40  GSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASG-IVKYPNVNVL 98
           G DP   + +    +   +G    K +            P  P A      ++  NV   
Sbjct: 150 GGDPENPQEVDRLRLATPAGSEVAKGLDGLFRVKGGGILPDDPEARLLTRSIEGSNVTAT 209

Query: 99  VETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
               +M E +R +   L+ I    DM + T +L++
Sbjct: 210 SALVEMIEASRSWDTQLKMIGDVRDMDSATANLMQ 244


>gi|259908806|ref|YP_002649162.1| flagellar hook-associated protein FlgK [Erwinia pyrifoliae Ep1/96]
 gi|224964428|emb|CAX55937.1| Flagellar hook-filament junction protein 1 [Erwinia pyrifoliae
           Ep1/96]
          Length = 551

 Score = 39.1 bits (89), Expect = 0.23,   Method: Composition-based stats.
 Identities = 15/99 (15%), Positives = 36/99 (36%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +    + A SGL+  SA +   S NI N   TG +  +    +   +     +   G  V
Sbjct: 1   MSNLINTAMSGLSASSAALNTTSNNITNYAVTGYSRQTTVLNQSASTLSGGNYYGNGAAV 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETA 102
             +  +   F+ +        +++   +   ++ + +  
Sbjct: 61  SSVYREYDQFINKQLLAASTQSSALSTQAGQMSNIDDMM 99


>gi|254418692|ref|ZP_05032416.1| flagellar hook-associated protein FlgK [Brevundimonas sp. BAL3]
 gi|196184869|gb|EDX79845.1| flagellar hook-associated protein FlgK [Brevundimonas sp. BAL3]
          Length = 705

 Score = 39.1 bits (89), Expect = 0.23,   Method: Composition-based stats.
 Identities = 28/106 (26%), Positives = 39/106 (36%), Gaps = 12/106 (11%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             L +  +IA SGL    A++++ S+NIAN  T G       Y RKT+     +    G 
Sbjct: 1   MSLTSIMNIATSGLQTAQAQLRVTSDNIANVHTPG-------YVRKTVDQTAAVTQGYGA 53

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
            V     D +      D     A  S         V  E  D  +T
Sbjct: 54  GV-----DIARVRLATDRFLQAAGMSANADAARETVRYELYDQIQT 94



 Score = 38.3 bits (87), Expect = 0.32,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 21/40 (52%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            VN+  E  +M    + Y A+ + I+ S DM  T + +L+
Sbjct: 666 GVNMDEELVNMTTFQQAYNASARLIQASKDMYDTLIGMLK 705


>gi|116872094|ref|YP_848875.1| flagellar hook-associated protein FlgK [Listeria welshimeri serovar
           6b str. SLCC5334]
 gi|116740972|emb|CAK20092.1| flagellar hook-associated protein 1-related protein [Listeria
           welshimeri serovar 6b str. SLCC5334]
          Length = 506

 Score = 39.1 bits (89), Expect = 0.23,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 20/39 (51%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
            VN+  E  ++ +    Y+AN + +   +DMM   L +L
Sbjct: 468 GVNIDEEMTNIMQYQSYYVANTKAMNTVNDMMKALLAML 506


>gi|323703356|ref|ZP_08115006.1| flagellar hook-associated protein FlgK [Desulfotomaculum
           nigrificans DSM 574]
 gi|323531719|gb|EGB21608.1| flagellar hook-associated protein FlgK [Desulfotomaculum
           nigrificans DSM 574]
          Length = 496

 Score = 39.1 bits (89), Expect = 0.24,   Method: Composition-based stats.
 Identities = 8/41 (19%), Positives = 18/41 (43%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             V+V  E   + +    Y A+ + I    +M+   ++ +R
Sbjct: 456 SGVSVDEELTRVIQFQYGYQASARMIAIQDEMLDYLINRIR 496



 Score = 37.2 bits (84), Expect = 0.85,   Method: Composition-based stats.
 Identities = 14/80 (17%), Positives = 19/80 (23%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M        IA  G       M +   NIANA T G +      +         +     
Sbjct: 1  MPGTWFGLEIAKRGTMAHRKAMDVTGHNIANASTPGYSRQEAVIKPTDPWTLPGLETRML 60

Query: 61 VRVKKIGVDQSTFVEEFDPG 80
                G   +      D  
Sbjct: 61 PGQLGTGSQVTEVRRIRDYY 80


>gi|239828340|ref|YP_002950964.1| flagellar hook-associated protein FlgK [Geobacillus sp. WCH70]
 gi|239808633|gb|ACS25698.1| flagellar hook-associated protein FlgK [Geobacillus sp. WCH70]
          Length = 541

 Score = 39.1 bits (89), Expect = 0.24,   Method: Composition-based stats.
 Identities = 14/117 (11%), Positives = 36/117 (30%), Gaps = 12/117 (10%)

Query: 26  SENIANARTTGDTPGS-------DPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFD 78
           + N+AN  +   +  +       +  +  T++               IG       +   
Sbjct: 418 AINLANVGSMLLSADTVSLIGTTNTIQISTLNLPLTSGTIQTNYQGWIGKLGVDGQQANR 477

Query: 79  PGHPVANASGIVKY-----PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             +        V+       +V++  E  +M +    Y A  + I    +M+   ++
Sbjct: 478 MKNNSDVLRQSVEERRQSVSSVSLDEEMMNMIKFQHAYNAAARQITVVDEMLDKIIN 534



 Score = 35.2 bits (79), Expect = 3.2,   Method: Composition-based stats.
 Identities = 13/79 (16%), Positives = 23/79 (29%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M         A   +  Q A + +   N+ANA T G T     + +        ++    
Sbjct: 1  MLSTFHGLEAAKRAMMTQQAALYVTGHNVANANTPGYTRQRVNFVQTEPFPSPGLNRPQI 60

Query: 61 VRVKKIGVDQSTFVEEFDP 79
                GV   +     + 
Sbjct: 61 PGQMGTGVKAGSVERVREY 79


>gi|152997576|ref|YP_001342411.1| flagellar hook-associated protein FlgK [Marinomonas sp. MWYL1]
 gi|150838500|gb|ABR72476.1| flagellar hook-associated protein FlgK [Marinomonas sp. MWYL1]
          Length = 658

 Score = 39.1 bits (89), Expect = 0.24,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 20/43 (46%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +   V++  E  ++ +  + Y A+ Q +  +     T L ++R
Sbjct: 616 RLSAVSLDEEAVNLMKYQQSYSASAQVVTAARTTFETLLGIMR 658


>gi|89072308|ref|ZP_01158887.1| putative flagellar hook-associated protein [Photobacterium sp.
           SKA34]
 gi|89051840|gb|EAR57292.1| putative flagellar hook-associated protein [Photobacterium sp.
           SKA34]
          Length = 286

 Score = 39.1 bits (89), Expect = 0.24,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 20/41 (48%)

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
              VN   E A++      Y AN++ I  ++++  + L LL
Sbjct: 246 LSAVNSDEEAANLMTFTNAYQANMKVISTANELFDSVLRLL 286


>gi|323700468|ref|ZP_08112380.1| flagellar hook-associated protein FlgK [Desulfovibrio sp. ND132]
 gi|323460400|gb|EGB16265.1| flagellar hook-associated protein FlgK [Desulfovibrio desulfuricans
           ND132]
          Length = 669

 Score = 38.7 bits (88), Expect = 0.24,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 20/39 (51%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VNV  E  ++ +  + Y A  Q I  + +MM T LD+
Sbjct: 630 SEVNVDEELIELTKYQQAYEAAAQIISVTREMMETVLDM 668


>gi|157694040|ref|YP_001488502.1| flagellar basal-body rod protein [Bacillus pumilus SAFR-032]
 gi|157682798|gb|ABV63942.1| flagellar basal-body rod protein [Bacillus pumilus SAFR-032]
          Length = 279

 Score = 38.7 bits (88), Expect = 0.24,   Method: Composition-based stats.
 Identities = 20/132 (15%), Positives = 45/132 (34%), Gaps = 4/132 (3%)

Query: 6   ASAHIANSGL-AVQSARMQIISENIA-NARTTGDTPGSDPYRRKTISFEEVMHGSG-GVR 62
               I    L +V    + + SEN   NA  T    G +  +       +  + +  G  
Sbjct: 146 NQLTINGRALLSVTGEPITVQSENFKVNADGTVSENGQNLGQIDVRVAMDTRNLAREGND 205

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
           + +   +Q       +       + G+ +  NV+V     +M    R +  N + ++   
Sbjct: 206 LYRTADNQPLPSAVNNGQMSYTLSQGVSELSNVDVTKSYTEMTTAYRAFETNQKVVQAYD 265

Query: 123 DMMTTTLD-LLR 133
             +   ++ + R
Sbjct: 266 KSLEKAVNEIGR 277



 Score = 36.4 bits (82), Expect = 1.2,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 19/40 (47%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDP 43
          ++   + A S +  Q  R +++S NIANA T G       
Sbjct: 1  MLKGLYTATSAMIAQERRTEMLSNNIANANTPGYKADEGT 40


>gi|308175273|ref|YP_003921978.1| flagellar hook-filament junction [Bacillus amyloliquefaciens DSM 7]
 gi|307608137|emb|CBI44508.1| flagellar hook-filament junction [Bacillus amyloliquefaciens DSM 7]
          Length = 505

 Score = 38.7 bits (88), Expect = 0.24,   Method: Composition-based stats.
 Identities = 17/106 (16%), Positives = 27/106 (25%), Gaps = 6/106 (5%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSD------PYRRKTISFEEV 54
           M         A   L+ Q   +  +S N+ANA T G T          PY   + + +  
Sbjct: 1   MPSTFMGLETARRALSAQQTALSTVSNNVANANTAGYTRQRVTLQSTSPYPAVSKNSDLT 60

Query: 55  MHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVE 100
               G                ++                N    +E
Sbjct: 61  AGQIGTGVKAGSVERVRDSFLDYQYRTENTKLGYYTARSNSLSQME 106



 Score = 34.8 bits (78), Expect = 4.0,   Method: Composition-based stats.
 Identities = 6/38 (15%), Positives = 15/38 (39%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             V++  E  +M +    Y A  + I    ++    ++
Sbjct: 461 SAVSLDEEMTNMIQFQHAYNAAARIITMQDEIFDKIIN 498


>gi|296135666|ref|YP_003642908.1| flagellar hook-associated protein FlgK [Thiomonas intermedia K12]
 gi|295795788|gb|ADG30578.1| flagellar hook-associated protein FlgK [Thiomonas intermedia K12]
          Length = 667

 Score = 38.7 bits (88), Expect = 0.24,   Method: Composition-based stats.
 Identities = 14/66 (21%), Positives = 26/66 (39%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  +    + A +GL    + +Q+   NIAN  T G +  +      T S     +   G
Sbjct: 1  MSGISGLLNNALTGLQAAQSALQVTGNNIANVNTPGYSRETAVQSTLTPSLYGGQYLGNG 60

Query: 61 VRVKKI 66
           ++  +
Sbjct: 61 TQIDAV 66


>gi|242309753|ref|ZP_04808908.1| flagellar basal-body rod protein flgg [Helicobacter pullorum MIT
          98-5489]
 gi|239523754|gb|EEQ63620.1| flagellar basal-body rod protein flgg [Helicobacter pullorum MIT
          98-5489]
          Length = 277

 Score = 38.7 bits (88), Expect = 0.24,   Method: Composition-based stats.
 Identities = 12/38 (31%), Positives = 19/38 (50%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGS 41
          +    + +  G+  Q  R+ +I+ NIANA TTG     
Sbjct: 1  MQGGFYSSVGGMVTQINRLDVIANNIANANTTGFKRDD 38



 Score = 37.5 bits (85), Expect = 0.57,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 26/62 (41%), Gaps = 1/62 (1%)

Query: 70  QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS-HDMMTTT 128
           +    E        A   G ++  N+NV+ E   + ETNRL  A  + +K    D+ T  
Sbjct: 210 EERMNEMEVLERSGAVRQGFLEKSNINVVYEMTGLIETNRLVEAYSKVLKTHMDDLNTEA 269

Query: 129 LD 130
           + 
Sbjct: 270 IT 271


>gi|324113872|gb|EGC07846.1| flagellar basal-body rod protein FlgF [Escherichia fergusonii B253]
 gi|325497615|gb|EGC95474.1| flagellar basal body rod protein FlgF [Escherichia fergusonii
           ECD227]
          Length = 251

 Score = 38.7 bits (88), Expect = 0.25,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 32/102 (31%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           N     +T       +   + +  +        +     Q+T          +   SG++
Sbjct: 147 NPGDPANTVAPVGKLKLVKASDNEVQRGDDGIFRLSAESQATRGPVLQADPSLRVMSGVL 206

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NVN +   +DM    R +   ++ I    D       LL
Sbjct: 207 EGSNVNAVSAMSDMIANARRFEMQMKVISSVDDNEGRANQLL 248


>gi|218549195|ref|YP_002382986.1| flagellar basal body rod protein FlgF [Escherichia fergusonii ATCC
           35469]
 gi|218356736|emb|CAQ89364.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia fergusonii ATCC 35469]
          Length = 251

 Score = 38.7 bits (88), Expect = 0.25,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 32/102 (31%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           N     +T       +   + +  +        +     Q+T          +   SG++
Sbjct: 147 NPGDPANTVAPVGKLKLVKASDNEVQRGDDGIFRLSAESQATRGPVLQADPSLRVMSGVL 206

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NVN +   +DM    R +   ++ I    D       LL
Sbjct: 207 EGSNVNAVSAMSDMIANARRFEMQMKVISSVDDNEGRANQLL 248


>gi|119899026|ref|YP_934239.1| flagellar basal-body rod protein FlgF [Azoarcus sp. BH72]
 gi|119671439|emb|CAL95352.1| flagellar basal-body rod protein FlgF [Azoarcus sp. BH72]
          Length = 245

 Score = 38.7 bits (88), Expect = 0.25,   Method: Composition-based stats.
 Identities = 8/45 (17%), Positives = 18/45 (40%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           G ++  NVNV+ +   M    R +    + ++ +         +L
Sbjct: 198 GYLEGSNVNVVDQMVTMISLARQFEMQTRMLQTAEQNDRAAAQVL 242


>gi|116694225|ref|YP_728436.1| flagellar hook-associated protein FlgK [Ralstonia eutropha H16]
 gi|113528724|emb|CAJ95071.1| flagellar hook-associated protein 1 [Ralstonia eutropha H16]
          Length = 639

 Score = 38.7 bits (88), Expect = 0.25,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             VN+  ET  M    +LY AN + I+ +  +  T + + R
Sbjct: 599 SGVNMDEETVSMLRFQQLYQANARVIQTAGTLFDTIIGIGR 639


>gi|39936960|ref|NP_949236.1| flagellar basal body rod protein FlgF [Rhodopseudomonas palustris
           CGA009]
 gi|192292788|ref|YP_001993393.1| flagellar basal body rod protein FlgF [Rhodopseudomonas palustris
           TIE-1]
 gi|39650817|emb|CAE29340.1| putative flagellar basal-body rod protein flgF [Rhodopseudomonas
           palustris CGA009]
 gi|192286537|gb|ACF02918.1| flagellar basal body rod protein [Rhodopseudomonas palustris TIE-1]
          Length = 253

 Score = 38.7 bits (88), Expect = 0.25,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 22/53 (41%)

Query: 78  DPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            P        G V+  NVN ++E   M +  R Y      ++Q  ++  T ++
Sbjct: 194 TPDTKSMVRQGYVEKSNVNSVLEMTRMIDVTRTYTQISAMLQQESELRKTAIE 246


>gi|227112522|ref|ZP_03826178.1| flagellar basal body rod protein FlgF [Pectobacterium carotovorum
           subsp. brasiliensis PBR1692]
          Length = 251

 Score = 38.7 bits (88), Expect = 0.25,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 30/102 (29%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           NA    +T       +   +  + +  S     +     Q            V    G++
Sbjct: 147 NAGDPPNTIAQLGRLKLVKATGQEVERSDDGLFRLTQQAQQQRGNVLQNDPTVRIMPGVI 206

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NVN +    DM    R +   ++ I    D       +L
Sbjct: 207 EGSNVNTVDTMVDMIANARRFEMQMKIISSVDDNAQRANQIL 248


>gi|109899396|ref|YP_662651.1| flagellar hook-associated protein FlgK [Pseudoalteromonas atlantica
           T6c]
 gi|109701677|gb|ABG41597.1| flagellar hook-associated protein FlgK [Pseudoalteromonas atlantica
           T6c]
          Length = 709

 Score = 38.7 bits (88), Expect = 0.25,   Method: Composition-based stats.
 Identities = 16/105 (15%), Positives = 35/105 (33%), Gaps = 2/105 (1%)

Query: 29  IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASG 88
           +AN +       ++      +SF E      G   +K                   +   
Sbjct: 607 MANLQNENGMQLNNAGSGDPVSFHEAYANIVGDIGQKAANADIAVKAGEALKLQSKDW-- 664

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
                 V++  E A++    + Y A+ + +  + +M  T L ++R
Sbjct: 665 YDSVSGVSLDEEAANLVRFQQSYAASARLLNTAQEMFDTILSMVR 709


>gi|292487945|ref|YP_003530820.1| flagellar hook-filament junction protein 1 [Erwinia amylovora
           CFBP1430]
 gi|292899164|ref|YP_003538533.1| flagellar hook-associated protein 1 [Erwinia amylovora ATCC 49946]
 gi|291199012|emb|CBJ46123.1| flagellar hook-associated protein 1 [Erwinia amylovora ATCC 49946]
 gi|291553367|emb|CBA20412.1| Flagellar hook-filament junction protein 1 [Erwinia amylovora
           CFBP1430]
 gi|312172066|emb|CBX80323.1| Flagellar hook-filament junction protein 1 [Erwinia amylovora ATCC
           BAA-2158]
          Length = 551

 Score = 38.7 bits (88), Expect = 0.25,   Method: Composition-based stats.
 Identities = 15/99 (15%), Positives = 36/99 (36%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +    + A SGL+  SA +   S NI N   TG +  +    +   +     +   G  V
Sbjct: 1   MSNLINTAMSGLSASSAALNTTSNNITNYAVTGYSRQTTVLNQSASTLSGGNYYGNGAAV 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETA 102
             +  +   F+ +        +++   +   ++ + +  
Sbjct: 61  SSVYREYDQFINKQLLAASTQSSALSTQAGQMSNIDDMM 99


>gi|157959901|ref|YP_001499935.1| flagellar basal-body rod protein FlgF [Shewanella pealeana ATCC
           700345]
 gi|157844901|gb|ABV85400.1| flagellar basal-body rod protein FlgF [Shewanella pealeana ATCC
           700345]
          Length = 241

 Score = 38.7 bits (88), Expect = 0.25,   Method: Composition-based stats.
 Identities = 12/61 (19%), Positives = 25/61 (40%)

Query: 74  VEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            +       V  +SG ++  NV  + E     + +R +   ++ +K +  +      LLR
Sbjct: 180 RQPLPASEEVTVSSGFLEASNVQAVGELIAAMDLSRQFEVQVKLMKSAEKLAEAGNRLLR 239

Query: 134 D 134
           D
Sbjct: 240 D 240


>gi|302389655|ref|YP_003825476.1| flagellar basal-body rod protein FlgB [Thermosediminibacter oceani
           DSM 16646]
 gi|302200283|gb|ADL07853.1| flagellar basal-body rod protein FlgB [Thermosediminibacter oceani
           DSM 16646]
          Length = 136

 Score = 38.7 bits (88), Expect = 0.25,   Method: Composition-based stats.
 Identities = 17/138 (12%), Positives = 46/138 (33%), Gaps = 8/138 (5%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M  L  +A++    +  +  R ++++ NIAN  T         +      + +  +    
Sbjct: 1   MVGLFETANLLQKIMDAKWMRHEVLANNIANVDTPNFKRSDVVFEELLQKYLKESNSRLP 60

Query: 61  VRVKKIGVDQS-----TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
           ++        +         E    H     +      NV++  E  ++ E    Y    
Sbjct: 61  LKTTSEKHISNLKPTFDLKPEIVMQHDRVLRN---DGNNVDIDKEMVELVENTLSYNIMA 117

Query: 116 QTIKQSHDMMTTTLDLLR 133
           + +++   ++ + +   R
Sbjct: 118 EQVQRQFSLLRSAITEGR 135


>gi|218553655|ref|YP_002386568.1| flagellar basal body rod protein FlgF [Escherichia coli IAI1]
 gi|218360423|emb|CAQ97977.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli IAI1]
          Length = 251

 Score = 38.7 bits (88), Expect = 0.25,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 32/102 (31%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           N     +T       +   +    +        +     Q+T          +   SG++
Sbjct: 147 NPGDLANTVAPVGRLKLVKATGSEVQRGDDGIFRLSAESQATRGPILQADPTLRVMSGVL 206

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NVN +   +DM  + R +   ++ I    D       LL
Sbjct: 207 EGSNVNAVAAMSDMIASARRFEMQMKVISSVDDNAGRANQLL 248


>gi|163789663|ref|ZP_02184101.1| Flagellar hook-associated protein [Carnobacterium sp. AT7]
 gi|159875195|gb|EDP69261.1| Flagellar hook-associated protein [Carnobacterium sp. AT7]
          Length = 361

 Score = 38.7 bits (88), Expect = 0.25,   Method: Composition-based stats.
 Identities = 7/38 (18%), Positives = 16/38 (42%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             V++  E  +       + AN + I    +M+ T ++
Sbjct: 320 SGVSINEEVTNTITYQSAFEANSRIISVVSEMLDTLIN 357


>gi|120613060|ref|YP_972738.1| Fis family transcriptional regulator [Acidovorax citrulli AAC00-1]
 gi|120591524|gb|ABM34964.1| transcriptional regulator, Fis family [Acidovorax citrulli AAC00-1]
          Length = 246

 Score = 38.7 bits (88), Expect = 0.25,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 19/43 (44%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           ++  NVN +     M   +R + A ++ ++ +     T   LL
Sbjct: 200 LEGSNVNAVESMVGMIAASRQFEAQMRLLQTAETNDKTAAQLL 242


>gi|83595981|gb|ABC25341.1| flagellar hook associated protein [uncultured marine bacterium
           Ant24C4]
          Length = 478

 Score = 38.7 bits (88), Expect = 0.25,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 17/38 (44%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            V+   E   +    + Y AN + I+    MM+  LD+
Sbjct: 441 GVDSDQELQRLLRIEQSYAANARVIQTLDAMMSRLLDI 478


>gi|319787115|ref|YP_004146590.1| flagellar hook-associated protein FlgK [Pseudoxanthomonas
          suwonensis 11-1]
 gi|317465627|gb|ADV27359.1| flagellar hook-associated protein FlgK [Pseudoxanthomonas
          suwonensis 11-1]
          Length = 625

 Score = 38.7 bits (88), Expect = 0.25,   Method: Composition-based stats.
 Identities = 13/69 (18%), Positives = 21/69 (30%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          ++        L      +  +S N+AN  T G T     +  +  S     H   G +V 
Sbjct: 1  MSVLSTGTGALLAFQRALSTVSHNVANVNTEGYTRQRVDFAARRPSDYGYGHVGNGTQVA 60

Query: 65 KIGVDQSTF 73
           I       
Sbjct: 61 DIRRLADEL 69


>gi|238919260|ref|YP_002932775.1| flagellar basal-body rod protein FlgF, [Edwardsiella ictaluri
           93-146]
 gi|238868829|gb|ACR68540.1| flagellar basal-body rod protein FlgF, putative [Edwardsiella
           ictaluri 93-146]
          Length = 251

 Score = 38.7 bits (88), Expect = 0.25,   Method: Composition-based stats.
 Identities = 9/47 (19%), Positives = 17/47 (36%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
             G+++  NV  +     M    R +   ++ I+   D       LL
Sbjct: 202 MPGVLEGSNVQPVEAMISMISNARRFEMQMKVIRSVDDNEQKANQLL 248


>gi|296123915|ref|YP_003631693.1| flagellar basal body FlaE domain protein [Planctomyces limnophilus
           DSM 3776]
 gi|296016255|gb|ADG69494.1| flagellar basal body FlaE domain protein [Planctomyces limnophilus
           DSM 3776]
          Length = 562

 Score = 38.7 bits (88), Expect = 0.25,   Method: Composition-based stats.
 Identities = 14/86 (16%), Positives = 29/86 (33%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
             +  + +  +GG   ++        +           ASG ++  N ++     D+   
Sbjct: 477 RFANSDGLLEAGGTAFREGVSSGVPQIVSPGSFGAGTIASGKIELSNTDIGRNLVDLIVA 536

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  Y  N + I    D+    L L R
Sbjct: 537 STNYRGNARVISSVQDLTNELLLLGR 562



 Score = 34.8 bits (78), Expect = 3.8,   Method: Composition-based stats.
 Identities = 21/126 (16%), Positives = 44/126 (34%), Gaps = 4/126 (3%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR----RKTISFEEVMHG 57
             L ++ + + +GL++    + ++  NIANA T G    +  ++    R           
Sbjct: 1   MGLTSALNTSLNGLSLNEVTIDVLGNNIANAGTNGFKASTVRFQTQLARTLSIGSRPTAT 60

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
            GG   +++G+  +T     D      + S       +           + R Y  N   
Sbjct: 61  DGGSNPRQVGLGATTSAISKDFTQGSLSNSTSASDLAIQGEGFFVMDGSSGRTYTRNGNF 120

Query: 118 IKQSHD 123
           ++ S  
Sbjct: 121 LRSSDS 126


>gi|255605341|ref|XP_002538377.1| Flagellar L-ring protein precursor, putative [Ricinus communis]
 gi|223512459|gb|EEF24006.1| Flagellar L-ring protein precursor, putative [Ricinus communis]
          Length = 334

 Score = 38.7 bits (88), Expect = 0.25,   Method: Composition-based stats.
 Identities = 12/27 (44%), Positives = 16/27 (59%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYM 112
             G+++  NVNV+ E  DM ET R Y 
Sbjct: 79  RQGMLEGSNVNVVEELVDMIETQRAYE 105


>gi|221215578|ref|ZP_03588541.1| flagellar hook-associated protein FlgK [Burkholderia multivorans
           CGD1]
 gi|221164566|gb|EED97049.1| flagellar hook-associated protein FlgK [Burkholderia multivorans
           CGD1]
          Length = 698

 Score = 38.7 bits (88), Expect = 0.25,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 20/39 (51%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN   E A++ +  +LY AN + I+ +  +  T L L
Sbjct: 658 SGVNQNEEAANLMQYQQLYQANAKVIQTAATLFQTVLGL 696



 Score = 33.7 bits (75), Expect = 8.8,   Method: Composition-based stats.
 Identities = 16/91 (17%), Positives = 31/91 (34%)

Query: 8   AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
            ++  SGL      +    +NI+NA T G +     Y   +  +    +   GV    + 
Sbjct: 45  MNLGVSGLNAALWGLTTTGQNISNAATPGYSVERPVYAEASGQYTSSGYLPQGVNTVTVQ 104

Query: 68  VDQSTFVEEFDPGHPVANASGIVKYPNVNVL 98
              S ++ +        + +    Y  V  L
Sbjct: 105 RQYSQYLSDQLNTAQTQSGALSTWYSLVAQL 135


>gi|157146225|ref|YP_001453544.1| flagellar basal body rod protein FlgF [Citrobacter koseri ATCC
           BAA-895]
 gi|157083430|gb|ABV13108.1| hypothetical protein CKO_01982 [Citrobacter koseri ATCC BAA-895]
          Length = 251

 Score = 38.7 bits (88), Expect = 0.25,   Method: Composition-based stats.
 Identities = 15/102 (14%), Positives = 30/102 (29%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           N     +T       +   +    +        +     Q+           +   SG++
Sbjct: 147 NPGDPANTVAPVGRLKLVKALGSEVQRGDDGMFRLSAATQAARGPVLQADPSIRVMSGVL 206

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NVN +   +DM    R +   ++ I    D       LL
Sbjct: 207 EGSNVNAVSAMSDMIANARRFEMQMKVISSVDDNAGRANQLL 248


>gi|16125152|ref|NP_419716.1| flagellar hook-associated protein FlaN [Caulobacter crescentus
           CB15]
 gi|221233880|ref|YP_002516316.1| flagellar hook-associated protein FlaN [Caulobacter crescentus
           NA1000]
 gi|13422164|gb|AAK22884.1| flagellar hook-associated protein FlaN, putative [Caulobacter
           crescentus CB15]
 gi|220963052|gb|ACL94408.1| flagellar hook-associated protein FlaN [Caulobacter crescentus
           NA1000]
          Length = 703

 Score = 38.7 bits (88), Expect = 0.25,   Method: Composition-based stats.
 Identities = 24/102 (23%), Positives = 38/102 (37%), Gaps = 9/102 (8%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             L A    A SG+      +++ S+NIAN  TTG       Y RKT+S   ++    GV
Sbjct: 1   MSLNAIMSTATSGMMAAQTGLRVTSDNIANVNTTG-------YVRKTVSQSNLLSNGMGV 53

Query: 62  RV--KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVET 101
            V    I      F++         +    +    +N   + 
Sbjct: 54  GVNIDAIKRATDQFLQSASLNAASESGRASIVASTLNSAQQL 95



 Score = 36.0 bits (81), Expect = 1.6,   Method: Composition-based stats.
 Identities = 16/104 (15%), Positives = 32/104 (30%), Gaps = 1/104 (0%)

Query: 29  IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASG 88
           +ANA  +  T G                   G  + +     +   +E          S 
Sbjct: 600 LANAGESTATFGVAGSAASVTMTVARYAADFGGSIAR-KAATAESRKEAAAAVSSEVDSQ 658

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
                 VN+  E  ++    + + A+ + I+ + DM      +L
Sbjct: 659 RQSEEGVNLDEELINLTTYQQAFNASARLIQATKDMFDVLNGIL 702


>gi|317121025|ref|YP_004101028.1| flagellar basal-body rod protein FlgF [Thermaerobacter marianensis
           DSM 12885]
 gi|315591005|gb|ADU50301.1| flagellar basal-body rod protein FlgF [Thermaerobacter marianensis
           DSM 12885]
          Length = 249

 Score = 38.7 bits (88), Expect = 0.26,   Method: Composition-based stats.
 Identities = 9/85 (10%), Positives = 24/85 (28%), Gaps = 5/85 (5%)

Query: 46  RKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
            +            G  +          V    P        G+++  NV+ +    +M 
Sbjct: 164 ARVTFANPAALRKAGDNLLVDPGGAGPAVPVDTPV-----RQGVLEQSNVDPVRTVVEML 218

Query: 106 ETNRLYMANLQTIKQSHDMMTTTLD 130
              R + A+ + ++     +   + 
Sbjct: 219 ANFRAFEASQRAVQAQDQTLGLAIQ 243



 Score = 34.8 bits (78), Expect = 4.1,   Method: Composition-based stats.
 Identities = 11/65 (16%), Positives = 26/65 (40%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++   + A SG+  +  + + ++ ++AN  T G     +        F   +  +G   V
Sbjct: 1  MLRGLYTAASGMLARVLQQERLANDLANVNTPGYKASRNVTEAFPELFVARLERAGAAPV 60

Query: 64 KKIGV 68
            +G 
Sbjct: 61 GPVGT 65


>gi|312884833|ref|ZP_07744525.1| putative flagellar basal-body rod protein [Vibrio caribbenthicus
           ATCC BAA-2122]
 gi|309367485|gb|EFP95045.1| putative flagellar basal-body rod protein [Vibrio caribbenthicus
           ATCC BAA-2122]
          Length = 243

 Score = 38.7 bits (88), Expect = 0.26,   Method: Composition-based stats.
 Identities = 6/48 (12%), Positives = 20/48 (41%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
              ++  NV+ + E  ++   +R +    + +K +  +  +   L+  
Sbjct: 195 PEHIEGSNVSAIDELVNVMSLSRNFEMQFRMMKTAETLAKSGNKLMSS 242


>gi|220922288|ref|YP_002497590.1| flagellar hook-associated protein FlgK [Methylobacterium nodulans
           ORS 2060]
 gi|219946895|gb|ACL57287.1| flagellar hook-associated protein FlgK [Methylobacterium nodulans
           ORS 2060]
          Length = 623

 Score = 38.7 bits (88), Expect = 0.26,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 19/39 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN+  E + + +    Y AN + +  + DM+ T + +
Sbjct: 585 SGVNIDEELSRLIQLQSAYAANARVLTAAKDMIDTLMRI 623


>gi|221199746|ref|ZP_03572789.1| flagellar hook-associated protein FlgK [Burkholderia multivorans
           CGD2M]
 gi|221208649|ref|ZP_03581649.1| flagellar hook-associated protein FlgK [Burkholderia multivorans
           CGD2]
 gi|221171460|gb|EEE03907.1| flagellar hook-associated protein FlgK [Burkholderia multivorans
           CGD2]
 gi|221179985|gb|EEE12389.1| flagellar hook-associated protein FlgK [Burkholderia multivorans
           CGD2M]
          Length = 698

 Score = 38.7 bits (88), Expect = 0.26,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 20/39 (51%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN   E A++ +  +LY AN + I+ +  +  T L L
Sbjct: 658 SGVNQNEEAANLMQYQQLYQANAKVIQTAATLFQTVLGL 696



 Score = 33.7 bits (75), Expect = 9.3,   Method: Composition-based stats.
 Identities = 16/91 (17%), Positives = 31/91 (34%)

Query: 8   AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
            ++  SGL      +    +NI+NA T G +     Y   +  +    +   GV    + 
Sbjct: 45  MNLGVSGLNAALWGLTTTGQNISNAATPGYSVERPVYAEASGQYTSSGYLPQGVNTVTVQ 104

Query: 68  VDQSTFVEEFDPGHPVANASGIVKYPNVNVL 98
              S ++ +        + +    Y  V  L
Sbjct: 105 RQYSQYLSDQLNTAQTQSGALSTWYSLVAQL 135


>gi|261344141|ref|ZP_05971785.1| flagellar basal-body rod protein FlgF [Providencia rustigianii DSM
           4541]
 gi|282567733|gb|EFB73268.1| flagellar basal-body rod protein FlgF [Providencia rustigianii DSM
           4541]
          Length = 251

 Score = 38.7 bits (88), Expect = 0.26,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 15/43 (34%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           ++  NVN       M    R +   ++ I  + +       LL
Sbjct: 206 IEGSNVNAAEAMVSMIANARHFEMQMKVIHSADENAQRANQLL 248


>gi|170744541|ref|YP_001773196.1| flagellar basal body rod protein [Methylobacterium sp. 4-46]
 gi|168198815|gb|ACA20762.1| flagellar basal body rod protein [Methylobacterium sp. 4-46]
          Length = 242

 Score = 38.7 bits (88), Expect = 0.26,   Method: Composition-based stats.
 Identities = 10/87 (11%), Positives = 21/87 (24%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +    +++ S       R+  ++ NIAN  T G       +                   
Sbjct: 1  MQNGLYVSLSAQVALQKRLDTVANNIANLATVGYRAEETKFEAVFDKARTGPVAFASTGD 60

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIV 90
            I       ++   P          +
Sbjct: 61 TYISRLAGPTIKTDAPLDVAVQGDAWL 87



 Score = 36.0 bits (81), Expect = 1.9,   Method: Composition-based stats.
 Identities = 7/44 (15%), Positives = 19/44 (43%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            G ++  NVN ++E   +    R +   + T  ++   + + + 
Sbjct: 193 QGHLEGANVNPILEMTKLIAIQRAFDNAVATASEADSSLQSAIR 236


>gi|17548572|ref|NP_521912.1| flagellar hook-associated protein FlgK [Ralstonia solanacearum
           GMI1000]
 gi|17430820|emb|CAD17502.1| probable flagellar hook-associated protein 1 [Ralstonia
           solanacearum GMI1000]
          Length = 642

 Score = 38.7 bits (88), Expect = 0.26,   Method: Composition-based stats.
 Identities = 18/131 (13%), Positives = 44/131 (33%), Gaps = 5/131 (3%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV- 63
                ++ +G    +     +S N AN+    +       R  T+        S G    
Sbjct: 510 FNGIQMSLTGTPAANDTF-TVSANTANSTDGHNASAFAQLRNATVLDNGTTSISSGWSNL 568

Query: 64  ---KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
                I   Q++           ++ S       VN+  E  ++ +  + Y A+ + ++ 
Sbjct: 569 VTQVGIQASQASANLTSQKALLASSTSQQQSVSGVNLDDEAMNLMKYQQAYQASAKVMQT 628

Query: 121 SHDMMTTTLDL 131
           ++ +  + L +
Sbjct: 629 ANSLFDSLLSI 639


>gi|266621944|ref|ZP_06114879.1| flagellar basal-body rod protein FlgG [Clostridium hathewayi DSM
           13479]
 gi|288866378|gb|EFC98676.1| flagellar basal-body rod protein FlgG [Clostridium hathewayi DSM
           13479]
          Length = 246

 Score = 38.7 bits (88), Expect = 0.26,   Method: Composition-based stats.
 Identities = 6/45 (13%), Positives = 16/45 (35%), Gaps = 1/45 (2%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT-TLDLLR 133
           ++   VN+  E     E  R + +  + +     M      ++ +
Sbjct: 201 LEESGVNLNSEMTRAMEVQRAFQSCSRALTIIDQMNQKSASEIGK 245



 Score = 34.8 bits (78), Expect = 3.8,   Method: Composition-based stats.
 Identities = 17/81 (20%), Positives = 30/81 (37%), Gaps = 3/81 (3%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          + +  + A SG+ +    + I + NIAN +T+G          KT   E+++    G   
Sbjct: 1  MFSGFYTAASGVLMNQRALNISANNIANVKTSGYRSK---RLVKTTFDEQLVRQMNGQTT 57

Query: 64 KKIGVDQSTFVEEFDPGHPVA 84
             G    +  E     H   
Sbjct: 58 AIGGGSTISLAEREMTTHRQG 78


>gi|302878282|ref|YP_003846846.1| flagellar hook-associated protein FlgK [Gallionella
           capsiferriformans ES-2]
 gi|302581071|gb|ADL55082.1| flagellar hook-associated protein FlgK [Gallionella
           capsiferriformans ES-2]
          Length = 646

 Score = 38.7 bits (88), Expect = 0.26,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 20/41 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             VN+  E A++    R Y A  + ++ ++ M  + L L R
Sbjct: 606 SGVNLDEEAANLLRYQRAYQAAAKAMQIANTMFDSLLTLGR 646



 Score = 37.2 bits (84), Expect = 0.80,   Method: Composition-based stats.
 Identities = 13/98 (13%), Positives = 26/98 (26%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
                 + SG+      +     NIANA T G +  +     +            GV V 
Sbjct: 3   SNIYSASLSGMNAAQFALSTTQHNIANANTPGYSRQTMLVNSRAAQATGAGFVGQGVDVT 62

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETA 102
            +  +   F+           +       ++  +    
Sbjct: 63  GVVRNYDQFLTTQVRQEQTQASYLSTYLTSMKQIDNMV 100


>gi|291326355|ref|ZP_06124197.2| flagellar hook-associated protein FlgK [Providencia rettgeri DSM
           1131]
 gi|291314693|gb|EFE55146.1| flagellar hook-associated protein FlgK [Providencia rettgeri DSM
           1131]
          Length = 562

 Score = 38.7 bits (88), Expect = 0.26,   Method: Composition-based stats.
 Identities = 16/93 (17%), Positives = 29/93 (31%), Gaps = 2/93 (2%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           L    + A SG+      + +IS N+ANA        S  +     +     +   G   
Sbjct: 17  LNNVMNNALSGVNAAQGGLSVISNNLANAGVGYYHRQSAVFGENPGTMTPNGYFGNGTYF 76

Query: 64  KKIGVDQSTFV--EEFDPGHPVANASGIVKYPN 94
             +  +   F+  +         +    VK  N
Sbjct: 77  SHVRREFDEFINAQYSQSRARSGDYEAYVKNCN 109


>gi|170703622|ref|ZP_02894363.1| flagellar hook-associated protein FlgK [Burkholderia ambifaria
           IOP40-10]
 gi|170131468|gb|EDT00055.1| flagellar hook-associated protein FlgK [Burkholderia ambifaria
           IOP40-10]
          Length = 665

 Score = 38.7 bits (88), Expect = 0.26,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 20/39 (51%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN   E A++ +  +LY AN + I+ +  +  T L L
Sbjct: 625 SGVNQNEEAANLMQYQQLYQANAKVIQTAATLFQTVLGL 663



 Score = 34.5 bits (77), Expect = 4.5,   Method: Composition-based stats.
 Identities = 16/95 (16%), Positives = 30/95 (31%)

Query: 8   AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
            ++  SGL      +    +NI+NA T G +     Y   +  +    +   GV    + 
Sbjct: 6   MNLGVSGLNAALWGLTTTGQNISNAATPGYSVERPVYAEASGQYTSSGYMPQGVNTVTVQ 65

Query: 68  VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETA 102
              S ++ +          +    Y  V  L    
Sbjct: 66  RQYSQYLSDQLNSAQSQGGALSTWYSLVAQLNNYV 100


>gi|332296509|ref|YP_004438432.1| flagellar hook-associated protein FlgK [Thermodesulfobium narugense
           DSM 14796]
 gi|332179612|gb|AEE15301.1| flagellar hook-associated protein FlgK [Thermodesulfobium narugense
           DSM 14796]
          Length = 936

 Score = 38.7 bits (88), Expect = 0.27,   Method: Composition-based stats.
 Identities = 6/37 (16%), Positives = 17/37 (45%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            V++  E  ++ +    Y A+ + I   + M+   ++
Sbjct: 897 GVSMDEEMTNLIQYQTAYSASARVINAINSMLDKLIN 933



 Score = 34.1 bits (76), Expect = 6.8,   Method: Composition-based stats.
 Identities = 18/98 (18%), Positives = 28/98 (28%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
                IA S LA     M +   N+ANA T   +  S  + + T          G     
Sbjct: 7   FLGLQIAQSALASNQLAMDVTGHNVANANTASYSRQSPVFVQNTPLSYPTSGEVGTGVNI 66

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETA 102
                      +    +  +  S       +   V+TA
Sbjct: 67  STIKRYRDSFIDAQLRNASSLQSYYDTSSTLLQQVQTA 104


>gi|94969957|ref|YP_592005.1| flagellar hook-associated protein [Candidatus Koribacter
          versatilis Ellin345]
 gi|94552007|gb|ABF41931.1| Flagellar hook-associated protein [Candidatus Koribacter
          versatilis Ellin345]
          Length = 458

 Score = 38.7 bits (88), Expect = 0.27,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 22/65 (33%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  L  +  IA   +  +   MQ  + NIAN  T G +     +               G
Sbjct: 1  MASLSGTLSIATRAMLAEQGAMQATTNNIANVNTPGYSRQIPIFSAVDPVVSGSTTYGNG 60

Query: 61 VRVKK 65
          V ++ 
Sbjct: 61 VELRG 65



 Score = 36.0 bits (81), Expect = 1.6,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 19/42 (45%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
               V++  ETA++ +  R + A    +    +MM T + + 
Sbjct: 414 ALSGVSLDEETANLLQFQRGFEAAAHLVSVVDEMMQTVIAMG 455


>gi|15606764|ref|NP_214144.1| flagellar hook associated protein FlgK [Aquifex aeolicus VF5]
 gi|2983977|gb|AAC07523.1| flagellar hook associated protein FlgK [Aquifex aeolicus VF5]
          Length = 426

 Score = 38.7 bits (88), Expect = 0.27,   Method: Composition-based stats.
 Identities = 7/42 (16%), Positives = 21/42 (50%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           ++   V++  E  ++ +  + Y A  + + +  +M  T L++
Sbjct: 384 LERQGVSIDQEFMEIMQIQKNYEAVAKILPRIDEMFRTLLNM 425


>gi|159184364|ref|NP_353582.2| flagellar basal body rod protein FlgB [Agrobacterium tumefaciens
           str. C58]
 gi|159139678|gb|AAK86367.2| flagellar basal-body rod protein FlgB [Agrobacterium tumefaciens
           str. C58]
          Length = 130

 Score = 38.7 bits (88), Expect = 0.27,   Method: Composition-based stats.
 Identities = 26/112 (23%), Positives = 39/112 (34%), Gaps = 2/112 (1%)

Query: 19  SARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFD 78
           S R ++++ NIANA T              +       G        +G    +      
Sbjct: 18  SVRQEVVATNIANANTPKFHAKDVSPFEAVMQATSQQVGMARTNPAHLGESTLS-ENIAV 76

Query: 79  PGHPVANASGIVKYPN-VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
             +PV N  G+ +  N V +  E     E  R Y  N   +K  H MM  T+
Sbjct: 77  RDNPVNNEIGMQESGNSVGLAEEMTKTGEIKRQYDLNASLVKSFHRMMLMTV 128


>gi|13472570|ref|NP_104137.1| flagellar basal body rod protein FlgF [Mesorhizobium loti
           MAFF303099]
 gi|17366619|sp|Q98HE3|FLGF_RHILO RecName: Full=Flagellar basal-body rod protein flgF
 gi|14023316|dbj|BAB49923.1| flagellar basal-body rod protein; FlgF [Mesorhizobium loti
           MAFF303099]
          Length = 241

 Score = 38.7 bits (88), Expect = 0.27,   Method: Composition-based stats.
 Identities = 15/106 (14%), Positives = 31/106 (29%), Gaps = 4/106 (3%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVAN---AS 87
           N        GS     + +    + +   G    + G          +P    ++   A 
Sbjct: 133 NGPPKAGADGSLRQNDQLVGSIGLYNFDPGENFVRYGNSGIVPARTPEPVTDRSDVGIAQ 192

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTI-KQSHDMMTTTLDLL 132
           G V+  NVN ++E   +    R +      + + +         L 
Sbjct: 193 GFVEESNVNPVLEMTRLIMVQRAFENTAALMRQTASSSDEAIKTLG 238



 Score = 35.2 bits (79), Expect = 2.8,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 18/33 (54%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          +  S ++A S       R+  I++N+ANA T G
Sbjct: 1  MQDSLYVALSAQMALERRLDTIADNVANANTVG 33


>gi|332088747|gb|EGI93859.1| flagellar basal-body rod protein flgF [Shigella boydii 5216-82]
          Length = 123

 Score = 38.7 bits (88), Expect = 0.27,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 32/102 (31%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           N     +T       +   +    +        +     Q+T          +   SG++
Sbjct: 19  NPGDPANTVAPVGRLKLVKATGSEVQRGDDGIFRLSAETQATREPVLQADPTLRVMSGVL 78

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NVN +   +DM  + R +   ++ I    D       LL
Sbjct: 79  EGSNVNAVAAMSDMIASARRFEMQMKVISSVDDNAGRANQLL 120


>gi|251772404|gb|EES52971.1| flagellar hook-associated protein FlgK [Leptospirillum
          ferrodiazotrophum]
          Length = 559

 Score = 38.7 bits (88), Expect = 0.27,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 31/78 (39%), Gaps = 7/78 (8%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  +I   +I  +G+    A ++    N++N  T G       Y R+ +  E+ +   G 
Sbjct: 1  MSGIIGVMNIGQTGIEANEAALKTAGHNLSNVNTPG-------YSRERVMLEQHVPDMGH 53

Query: 61 VRVKKIGVDQSTFVEEFD 78
            +   GVD +      +
Sbjct: 54 PGMMGAGVDAARIRRVVN 71


>gi|291520179|emb|CBK75400.1| Flagellar hook-associated protein [Butyrivibrio fibrisolvens 16/4]
          Length = 199

 Score = 38.7 bits (88), Expect = 0.27,   Method: Composition-based stats.
 Identities = 16/132 (12%), Positives = 36/132 (27%), Gaps = 7/132 (5%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M     S ++  SGL   S  +   + N++N  T G       Y  +          S  
Sbjct: 1   MANSFGSLYVGASGLQSASHGLNTTANNLSNINTEGYVREQVVYEDRNYQKIGTAAISTQ 60

Query: 61  VRVKKIGVDQSTFVEEFDPGHPV--ANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
            R   + V       +          N        +   + E     +      ++ +  
Sbjct: 61  YRGLGVQVGTIVHARDIFLDKAYRSENGRHSFYDASSEAVQEVITHLQ-----ESDGKAF 115

Query: 119 KQSHDMMTTTLD 130
           +++ +      +
Sbjct: 116 EEAIENFQEAFE 127


>gi|254499106|ref|ZP_05111796.1| hypothetical protein LDG_3179 [Legionella drancourtii LLAP12]
 gi|254351645|gb|EET10490.1| hypothetical protein LDG_3179 [Legionella drancourtii LLAP12]
          Length = 408

 Score = 38.7 bits (88), Expect = 0.27,   Method: Composition-based stats.
 Identities = 7/39 (17%), Positives = 17/39 (43%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
           ++  NV+   E A++    R++ A  Q +     ++   
Sbjct: 366 LEASNVDSTAEFANIVVLQRMFQACSQIMDIDKQLLEEL 404


>gi|218528725|ref|YP_002419541.1| flagellar basal body rod protein [Methylobacterium chloromethanicum
           CM4]
 gi|218521028|gb|ACK81613.1| flagellar basal body rod protein [Methylobacterium chloromethanicum
           CM4]
          Length = 242

 Score = 38.7 bits (88), Expect = 0.27,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 18/43 (41%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
            G V+  NVN ++E   +    R + +      ++   +T  +
Sbjct: 193 QGYVEGANVNPIMEMTRLIAIQRAFESAATMTSEADTTLTGAV 235


>gi|328545467|ref|YP_004305576.1| flagellar basal body rod protein [polymorphum gilvum SL003B-26A1]
 gi|326415208|gb|ADZ72271.1| Flagellar basal body rod protein [Polymorphum gilvum SL003B-26A1]
          Length = 241

 Score = 38.7 bits (88), Expect = 0.27,   Method: Composition-based stats.
 Identities = 13/98 (13%), Positives = 25/98 (25%), Gaps = 3/98 (3%)

Query: 33  RTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKY 92
             T                +E    +       I    +  ++EF          G V+ 
Sbjct: 141 DGTVTQGEDVAGALGLFRIDERAKLTRFDNSGVIPDIPAEPIQEFT---SSGMVQGYVEG 197

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            N+N + E   +    R +      I+ S       + 
Sbjct: 198 ANINPIRELTKLIMITRAFEGATSMIEASDRSQEQAIR 235


>gi|322832565|ref|YP_004212592.1| flagellar basal-body rod protein FlgF [Rahnella sp. Y9602]
 gi|321167766|gb|ADW73465.1| flagellar basal-body rod protein FlgF [Rahnella sp. Y9602]
          Length = 251

 Score = 38.7 bits (88), Expect = 0.27,   Method: Composition-based stats.
 Identities = 12/101 (11%), Positives = 28/101 (27%)

Query: 32  ARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVK 91
           A    +T G     +   +    +        +              P   +    G ++
Sbjct: 148 AGADPNTMGQLGKLKLVKAANNEVTRGDDGMFRPTPATVQARGAALQPDPTIHVMPGTLE 207

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
             N + +    DM    R +   ++ I    +   +  +LL
Sbjct: 208 GSNADPVSTMVDMIANARRFEMQMKVIHSVDENEQSANNLL 248


>gi|149203126|ref|ZP_01880097.1| hypothetical protein RTM1035_20326 [Roseovarius sp. TM1035]
 gi|149143672|gb|EDM31708.1| hypothetical protein RTM1035_20326 [Roseovarius sp. TM1035]
          Length = 237

 Score = 38.7 bits (88), Expect = 0.27,   Method: Composition-based stats.
 Identities = 17/102 (16%), Positives = 36/102 (35%), Gaps = 5/102 (4%)

Query: 34  TTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEF-----DPGHPVANASG 88
               + G  P    + +   +        + ++G+ +   V        +P        G
Sbjct: 132 PDASSIGLSPDGTLSDNGRPLAQIGLVRPIDRVGMIREDGVMFHADGGFEPVEEGVIHQG 191

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            ++  NV+ + + A M E  R Y      +   H+ +T+ LD
Sbjct: 192 FLEGANVDPIGQVARMIEVQRAYEMGQSFLDTEHERVTSALD 233


>gi|54297183|ref|YP_123552.1| flagellar basal body rod protein FlgF [Legionella pneumophila str.
           Paris]
 gi|53750968|emb|CAH12379.1| flagellar biosynthesis protein FlgF [Legionella pneumophila str.
           Paris]
          Length = 248

 Score = 38.7 bits (88), Expect = 0.27,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 20/48 (41%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            SG ++  NVN + +   M    R + A ++ +    D       LL+
Sbjct: 200 QSGALEGSNVNAIDQMVAMISAGREFDAQMKLLSTVDDNGQKLAQLLQ 247


>gi|330447910|ref|ZP_08311558.1| flagellar hook-associated protein FlgK [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
 gi|328492101|dbj|GAA06055.1| flagellar hook-associated protein FlgK [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
          Length = 455

 Score = 38.7 bits (88), Expect = 0.27,   Method: Composition-based stats.
 Identities = 18/98 (18%), Positives = 33/98 (33%), Gaps = 2/98 (2%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           +   +I  SGL      + + + N+AN  T G +          ++  E+     GV V 
Sbjct: 1   MNMINIGLSGLNANKTALDVTAHNVANVNTVGYSRQQA--MMSALAGRELFSAGSGVEVD 58

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETA 102
            I      F+ +         A+      N+ +L    
Sbjct: 59  SIRRVSDQFIVKQMWAATSQQAASNANLANMTMLESLL 96



 Score = 36.8 bits (83), Expect = 0.97,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 20/41 (48%)

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
              VN   E A++      Y AN++ I  ++++  + L LL
Sbjct: 415 LSAVNSDEEAANLMTFTNAYQANMKVISTANELFDSVLRLL 455


>gi|291526818|emb|CBK92404.1| flagellar hook-associated protein FlgK [Eubacterium rectale
          M104/1]
          Length = 569

 Score = 38.7 bits (88), Expect = 0.27,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 26/78 (33%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M     S ++ +SGL      +   + N+AN  TTG       +  K             
Sbjct: 1  MANGFGSFYVGSSGLKNSQNALNTTANNMANVNTTGYVRQQVRFSDKHYITRNNPTAGTN 60

Query: 61 VRVKKIGVDQSTFVEEFD 78
          ++   +GV  S      D
Sbjct: 61 IQQSGLGVSVSDVAHVRD 78


>gi|257866412|ref|ZP_05646065.1| flagellar hook-associated protein FlgK [Enterococcus casseliflavus
           EC30]
 gi|257873072|ref|ZP_05652725.1| flagellar hook-associated protein FlgK [Enterococcus casseliflavus
           EC10]
 gi|257800370|gb|EEV29398.1| flagellar hook-associated protein FlgK [Enterococcus casseliflavus
           EC30]
 gi|257807236|gb|EEV36058.1| flagellar hook-associated protein FlgK [Enterococcus casseliflavus
           EC10]
          Length = 507

 Score = 38.7 bits (88), Expect = 0.27,   Method: Composition-based stats.
 Identities = 16/100 (16%), Positives = 29/100 (29%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M  L  S   A  G+    A +Q  S NIAN  T G +      + +       +   G 
Sbjct: 1   MTGLFGSLGTATRGMTANQAALQTSSHNIANTNTDGYSRQRVNLQAEASYHLAGVGSIGM 60

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVE 100
                               +  +  +   +  ++   +E
Sbjct: 61  GVKVGSVERIVDDFVIGQVRNANSTYTYYEQKADILGQLE 100



 Score = 36.8 bits (83), Expect = 0.95,   Method: Composition-based stats.
 Identities = 7/38 (18%), Positives = 19/38 (50%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             V++  E +D+    + + AN + +    +M+ T ++
Sbjct: 466 SGVSLNEEMSDVIRFQQGFQANARILSVVSEMLDTLIN 503


>gi|167623367|ref|YP_001673661.1| flagellar hook-associated protein FlgK [Shewanella halifaxensis
           HAW-EB4]
 gi|167353389|gb|ABZ76002.1| flagellar hook-associated protein FlgK [Shewanella halifaxensis
           HAW-EB4]
          Length = 639

 Score = 38.7 bits (88), Expect = 0.27,   Method: Composition-based stats.
 Identities = 16/101 (15%), Positives = 31/101 (30%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           +   +IA +G+    +++ I S NIANA T G                       G  V 
Sbjct: 3   LDLMNIARTGVLASQSQLAITSNNIANANTAGYNRQVVSQSALDSQRMGNEFYGAGTYVS 62

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
            +    + +          A +     +  ++ L +     
Sbjct: 63  DVKRVYNDYATRELRIGSTAVSESQTTFSKMSQLDQLFSQM 103



 Score = 34.1 bits (76), Expect = 6.5,   Method: Composition-based stats.
 Identities = 13/127 (10%), Positives = 33/127 (25%)

Query: 7   SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
           +  I ++  A +     +      N         S+                        
Sbjct: 513 TFEIDSTATAAEKFTFDLSFAEGDNTNMVSMAKLSEAKLMNGGKTTLTDVFENTTIDVGS 572

Query: 67  GVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
               +               + +     VN+  E A++    + Y A+ + +  ++++  
Sbjct: 573 KTKSAEISMGSAEAIYKQAYTRVQSVSGVNLDEEAANLMRFQQSYQASARIMTTANEIFN 632

Query: 127 TTLDLLR 133
           T    LR
Sbjct: 633 TLFSSLR 639


>gi|54294164|ref|YP_126579.1| flagellar basal body rod protein FlgF [Legionella pneumophila str.
           Lens]
 gi|53753996|emb|CAH15467.1| flagellar biosynthesis protein FlgF [Legionella pneumophila str.
           Lens]
          Length = 248

 Score = 38.7 bits (88), Expect = 0.27,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 20/48 (41%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            SG ++  NVN + +   M    R + A ++ +    D       LL+
Sbjct: 200 QSGALEGSNVNAIDQMVAMISAGREFDAQMKLLSTVDDNGQKLAQLLQ 247


>gi|90422997|ref|YP_531367.1| flagellar hook-associated protein [Rhodopseudomonas palustris
           BisB18]
 gi|90105011|gb|ABD87048.1| Flagellar hook-associated protein [Rhodopseudomonas palustris
           BisB18]
          Length = 626

 Score = 38.7 bits (88), Expect = 0.27,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 15/45 (33%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
                    VN+  E A +      Y AN + +   + M  T + 
Sbjct: 580 QKKFSDVSGVNMDEEMAHLLSLQNAYSANARVMSTVNQMYQTLMQ 624


>gi|257876025|ref|ZP_05655678.1| flagellar hook-associated protein FlgK [Enterococcus casseliflavus
           EC20]
 gi|257810191|gb|EEV39011.1| flagellar hook-associated protein FlgK [Enterococcus casseliflavus
           EC20]
          Length = 507

 Score = 38.7 bits (88), Expect = 0.28,   Method: Composition-based stats.
 Identities = 16/100 (16%), Positives = 29/100 (29%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M  L  S   A  G+    A +Q  S NIAN  T G +      + +       +   G 
Sbjct: 1   MTGLFGSLGTATRGMTANQAALQTSSHNIANTNTDGYSRQRVNLQAEASYHLAGVGSIGM 60

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVE 100
                               +  +  +   +  ++   +E
Sbjct: 61  GVKVGSVERIVDDFVIGQVRNANSTYTYYEQKADILGQLE 100



 Score = 36.8 bits (83), Expect = 0.99,   Method: Composition-based stats.
 Identities = 7/38 (18%), Positives = 19/38 (50%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             V++  E +D+    + + AN + +    +M+ T ++
Sbjct: 466 SGVSLNEEMSDVIRFQQGFQANARILSVVSEMLDTLIN 503


>gi|254503570|ref|ZP_05115721.1| conserved domain protein [Labrenzia alexandrii DFL-11]
 gi|222439641|gb|EEE46320.1| conserved domain protein [Labrenzia alexandrii DFL-11]
          Length = 243

 Score = 38.7 bits (88), Expect = 0.28,   Method: Composition-based stats.
 Identities = 10/54 (18%), Positives = 21/54 (38%), Gaps = 1/54 (1%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL-DLLR 133
                  G V+  N+N + E   M   +R + +  + I    +   T + +L +
Sbjct: 188 DQHGIRQGYVEGANINPVREMTKMIMISRAFESATKMIDMGSESQKTAIRELGK 241



 Score = 34.5 bits (77), Expect = 5.6,   Method: Composition-based stats.
 Identities = 12/76 (15%), Positives = 25/76 (32%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          + ++ ++A S     S R++ +S N+AN  T G       +                   
Sbjct: 1  MQSALYVALSAQVALSNRLETVSRNVANMNTAGYRADEINFAEMVSKAGPDKVSFSSGGE 60

Query: 64 KKIGVDQSTFVEEFDP 79
            I     +  +  +P
Sbjct: 61 NYISRQNGSLNKTDNP 76


>gi|192361114|ref|YP_001982394.1| flagellar hook-associated protein 1 FlgK [Cellvibrio japonicus
           Ueda107]
 gi|190687279|gb|ACE84957.1| flagellar hook-associated protein 1 FlgK [Cellvibrio japonicus
           Ueda107]
          Length = 923

 Score = 38.7 bits (88), Expect = 0.28,   Method: Composition-based stats.
 Identities = 12/38 (31%), Positives = 20/38 (52%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             VN+  E AD+    +LY AN + I  + ++  T L+
Sbjct: 884 SGVNLDEEAADLIRFQQLYQANARVITVARELFDTLLN 921



 Score = 37.5 bits (85), Expect = 0.68,   Method: Composition-based stats.
 Identities = 20/99 (20%), Positives = 30/99 (30%), Gaps = 1/99 (1%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-GVR 62
           +      A SGL      ++    NI+NA TTG T     Y  +           G GV 
Sbjct: 1   MSGILSNAISGLQASQNALRTAGHNISNANTTGYTRQQVVYSTRPEQSAGAAGFVGSGVT 60

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVET 101
              I    + FV                   N++ + + 
Sbjct: 61  TTSIERIVNDFVTAQLRLDTSTYNQLNTYNVNISKIDKL 99


>gi|182412215|ref|YP_001817281.1| flagellar hook-associated protein FlgK [Opitutus terrae PB90-1]
 gi|177839429|gb|ACB73681.1| flagellar hook-associated protein FlgK [Opitutus terrae PB90-1]
          Length = 484

 Score = 38.7 bits (88), Expect = 0.28,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 21/68 (30%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  L AS +     L+  S  ++   +N+AN            Y  +          S G
Sbjct: 1  MSGLFASLNSTVGALSAHSRSIETAGKNLANVNNASYARQRVVYGDRGTIVTPDGAYSLG 60

Query: 61 VRVKKIGV 68
          +    +  
Sbjct: 61 LEALGVQQ 68



 Score = 36.8 bits (83), Expect = 1.1,   Method: Composition-based stats.
 Identities = 5/38 (13%), Positives = 18/38 (47%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             V++  E +D+ +  R + A+ +  +    ++   ++
Sbjct: 443 SGVSLDEELSDLLKYQRAFQASSRVFQTIDKLLGVVVE 480


>gi|163744345|ref|ZP_02151705.1| Flagellar hook-associated protein [Oceanibulbus indolifex HEL-45]
 gi|161381163|gb|EDQ05572.1| Flagellar hook-associated protein [Oceanibulbus indolifex HEL-45]
          Length = 468

 Score = 38.7 bits (88), Expect = 0.28,   Method: Composition-based stats.
 Identities = 20/99 (20%), Positives = 38/99 (38%), Gaps = 7/99 (7%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             + ++ +IA SGL+    R  +++ NIANA+T G       Y R+        +     
Sbjct: 1   MSISSAFNIARSGLSTTEGRASLVAGNIANAQTEG-------YARREAVQVTGNNTVDLR 53

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVE 100
             +++    +            A+ +G V    +  L E
Sbjct: 54  VARQVDERLAGMTRGASAQLGAASVTGEVLGSYLLTLGE 92


>gi|157371201|ref|YP_001479190.1| flagellar hook-associated protein FlgK [Serratia proteamaculans
           568]
 gi|157322965|gb|ABV42062.1| flagellar hook-associated protein FlgK [Serratia proteamaculans
           568]
          Length = 548

 Score = 38.7 bits (88), Expect = 0.28,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 41/118 (34%), Gaps = 10/118 (8%)

Query: 24  IISENIANARTTGDTPGSDP--------YRRKTISFEEVMHGSGGVRVKKIGVDQSTFVE 75
             S NIA A       G +           +K +  +    G+    V  +G   ++   
Sbjct: 430 TNSSNIAAAGKDDSGRGDNENAKKLLDLQTKKLVDGKATFSGAYASMVSSVGNQTASAKV 489

Query: 76  EFDPGHPVANASGIVK--YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
                + +     I +     VN+  E  ++    + YMAN Q I+ +  M    L++
Sbjct: 490 SVTSQNNIVKQLTIQQQSASGVNLDEEYGELLRFQQYYMANAQVIQTASSMFDALLNI 547



 Score = 34.8 bits (78), Expect = 3.6,   Method: Composition-based stats.
 Identities = 14/95 (14%), Positives = 29/95 (30%)

Query: 8   AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
            + A SGL      +  +S NI+N    G    +    +             GV V  + 
Sbjct: 6   INTAMSGLNAAQVALSTVSNNISNYNVAGYNRQTAILAQNGGMSTMNGFIGNGVTVTSVN 65

Query: 68  VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETA 102
            + + F+     G      +    +  ++ +    
Sbjct: 66  REYNQFITNQLRGAQSQAGAQNAYFEKISQIDNLL 100


>gi|115353111|ref|YP_774950.1| flagellar hook-associated protein FlgK [Burkholderia ambifaria
           AMMD]
 gi|115283099|gb|ABI88616.1| flagellar hook-associated protein FlgK [Burkholderia ambifaria
           AMMD]
          Length = 665

 Score = 38.7 bits (88), Expect = 0.28,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 20/39 (51%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN   E A++ +  +LY AN + I+ +  +  T L L
Sbjct: 625 SGVNQNEEAANLMQYQQLYQANAKVIQTAATLFQTVLGL 663



 Score = 34.5 bits (77), Expect = 4.7,   Method: Composition-based stats.
 Identities = 16/95 (16%), Positives = 30/95 (31%)

Query: 8   AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
            ++  SGL      +    +NI+NA T G +     Y   +  +    +   GV    + 
Sbjct: 6   MNLGVSGLNAALWGLTTTGQNISNAATPGYSVERPVYAEASGQYTSSGYMPQGVNTVTVQ 65

Query: 68  VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETA 102
              S ++ +          +    Y  V  L    
Sbjct: 66  RQYSQYLSDQLNSAQSQGGALSTWYSLVAQLNNYV 100


>gi|325567496|ref|ZP_08144163.1| hypothetical protein HMPREF9087_0452 [Enterococcus casseliflavus
           ATCC 12755]
 gi|325158929|gb|EGC71075.1| hypothetical protein HMPREF9087_0452 [Enterococcus casseliflavus
           ATCC 12755]
          Length = 507

 Score = 38.7 bits (88), Expect = 0.28,   Method: Composition-based stats.
 Identities = 16/100 (16%), Positives = 29/100 (29%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M  L  S   A  G+    A +Q  S NIAN  T G +      + +       +   G 
Sbjct: 1   MTGLFGSLGTATRGMTANQAALQTSSHNIANTNTDGYSRQRVNLQAEASYHLAGVGSIGM 60

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVE 100
                               +  +  +   +  ++   +E
Sbjct: 61  GVKVGSVERIVDDFVIGQVRNANSTYTYYEQKADILGQLE 100



 Score = 36.8 bits (83), Expect = 0.97,   Method: Composition-based stats.
 Identities = 7/38 (18%), Positives = 19/38 (50%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             V++  E +D+    + + AN + +    +M+ T ++
Sbjct: 466 SGVSLNEEMSDVIRFQQGFQANARILSVVSEMLDTLIN 503


>gi|257871323|ref|ZP_05650976.1| flagellar hook-associated protein FlgK [Enterococcus gallinarum
           EG2]
 gi|257805487|gb|EEV34309.1| flagellar hook-associated protein FlgK [Enterococcus gallinarum
           EG2]
          Length = 507

 Score = 38.7 bits (88), Expect = 0.28,   Method: Composition-based stats.
 Identities = 16/100 (16%), Positives = 29/100 (29%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M  L  S   A  G+    A +Q  S NIAN  T G +      + +       +   G 
Sbjct: 1   MTGLFGSLGTATRGMTANQAALQTSSHNIANTNTDGYSRQRVNLQAEASYHLAGVGSIGM 60

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVE 100
                               +  +  +   +  ++   +E
Sbjct: 61  GVKVGSVERIVDDFVIGQVRNANSTYTYYEQKADILGQLE 100



 Score = 36.8 bits (83), Expect = 0.99,   Method: Composition-based stats.
 Identities = 7/38 (18%), Positives = 19/38 (50%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             V++  E +D+    + + AN + +    +M+ T ++
Sbjct: 466 SGVSLNEEMSDVIRFQQGFQANARILSVVSEMLDTLIN 503


>gi|152988763|ref|YP_001349649.1| flagellar basal body rod protein FlgF [Pseudomonas aeruginosa PA7]
 gi|150963921|gb|ABR85946.1| flagellar basal-body rod protein FlgF [Pseudomonas aeruginosa PA7]
          Length = 249

 Score = 38.7 bits (88), Expect = 0.28,   Method: Composition-based stats.
 Identities = 12/92 (13%), Positives = 29/92 (31%)

Query: 32  ARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVK 91
            R  G+ P       +       +          +        +       V   SG ++
Sbjct: 146 IRALGENPNVVAVVDRIKLVNPNLKQMEKGTDGLLHYKPQPGEQVPLADANVKVVSGFLE 205

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
             NVN + E   +   +R +  +++ ++ + D
Sbjct: 206 SSNVNAVEEMTAILSLSRQFELHVKMMRTAED 237


>gi|188592123|ref|YP_001796721.1| flagellar hook-associated protein flgk [Cupriavidus taiwanensis LMG
           19424]
 gi|170938497|emb|CAP63484.1| FlgK: Flagellar hook-associated protein 1 [Cupriavidus taiwanensis
           LMG 19424]
          Length = 639

 Score = 38.7 bits (88), Expect = 0.28,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             VN+  ET  M    +LY AN + I+ +  +  T + + R
Sbjct: 599 SGVNMDEETVSMLRFQQLYQANARVIQTAGTLFDTIIGIGR 639


>gi|330961200|gb|EGH61460.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv.
           maculicola str. ES4326]
          Length = 246

 Score = 38.7 bits (88), Expect = 0.29,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 23/56 (41%), Gaps = 3/56 (5%)

Query: 80  GHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS---HDMMTTTLDLL 132
              V   SG ++  NVN + E   +   +R +  +++ +K +      M   L L 
Sbjct: 191 DATVQVESGFLQASNVNAVEEMTSVLALSRQFELHVKMMKTAEEDDQSMARVLQLG 246


>gi|138896699|ref|YP_001127152.1| flagellar hook-associated protein FlgK [Geobacillus
           thermodenitrificans NG80-2]
 gi|134268212|gb|ABO68407.1| Flagellar hook-associated protein 1 [Geobacillus
           thermodenitrificans NG80-2]
          Length = 540

 Score = 38.7 bits (88), Expect = 0.29,   Method: Composition-based stats.
 Identities = 14/105 (13%), Positives = 33/105 (31%)

Query: 26  SENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVAN 85
           S N  +   T  T      +    S     +  G +    +   Q+  ++        + 
Sbjct: 429 SSNTISLIGTSATIQMSDLQLPLTSGTIQTNYQGWIGKLGVDGQQANRMKNNSDVLRQSV 488

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
                   +V++  E  +M +    Y A  + I    +M+   ++
Sbjct: 489 EERRQSVSSVSLDEEMMNMIKFQHAYNAAARQITVVDEMLDKIIN 533



 Score = 38.3 bits (87), Expect = 0.32,   Method: Composition-based stats.
 Identities = 16/109 (14%), Positives = 31/109 (28%), Gaps = 4/109 (3%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M         A   +  Q A +     NIANA T G T      +         ++    
Sbjct: 1   MLSTFHGLEAARRAMMAQQAALYTTGHNIANANTEGYTRQRVQLKATPPFPTPGLNRPNI 60

Query: 61  VRVKKIGVDQSTFVEEFDP----GHPVANASGIVKYPNVNVLVETADMR 105
                 GV+ ++     +      +   N+         + + +  D+ 
Sbjct: 61  PGQMGTGVEAASVERVREYFLDIQYRGENSKLGYWEARADAVSKMEDIM 109


>gi|56460246|ref|YP_155527.1| flagellar hook-associated protein [Idiomarina loihiensis L2TR]
 gi|56179256|gb|AAV81978.1| Flagellar hook-associated protein [Idiomarina loihiensis L2TR]
          Length = 671

 Score = 38.7 bits (88), Expect = 0.29,   Method: Composition-based stats.
 Identities = 18/88 (20%), Positives = 32/88 (36%), Gaps = 2/88 (2%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP--NVNVLVETADMR 105
                   + S G  V  +G   S      D    + + +  +      VN+  E A++ 
Sbjct: 584 EAEPTMTFNESYGRLVSDVGSRVSQNRVLRDSAEAIRSQTEALYESQAGVNLEEEAANLI 643

Query: 106 ETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  + Y A+ + I  S  +  T L  LR
Sbjct: 644 QYQQAYTASARIITTSQAIFETLLTSLR 671


>gi|238922533|ref|YP_002936046.1| flagellar hook-associated protein FlgK [Eubacterium rectale ATCC
          33656]
 gi|238874205|gb|ACR73912.1| flagellar hook-associated protein FlgK [Eubacterium rectale ATCC
          33656]
 gi|291526373|emb|CBK91960.1| flagellar hook-associated protein FlgK [Eubacterium rectale DSM
          17629]
          Length = 569

 Score = 38.7 bits (88), Expect = 0.29,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 26/78 (33%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M     S ++ +SGL      +   + N+AN  TTG       +  K             
Sbjct: 1  MANGFGSFYVGSSGLKNSQNALNTTANNMANVNTTGYVRQQVRFSDKHYITRNNPTAGTN 60

Query: 61 VRVKKIGVDQSTFVEEFD 78
          ++   +GV  S      D
Sbjct: 61 IQQSGLGVSVSDVAHVRD 78


>gi|223040701|ref|ZP_03610970.1| flagellar basal-body rod protein [Campylobacter rectus RM3267]
 gi|222878065|gb|EEF13177.1| flagellar basal-body rod protein [Campylobacter rectus RM3267]
          Length = 270

 Score = 38.7 bits (88), Expect = 0.29,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 15/43 (34%), Gaps = 1/43 (2%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQS-HDMMTTTLD 130
             +  NVN + E   + ET R      + +     D+    + 
Sbjct: 221 YTQISNVNAVTEMVGLIETQRFVEMYQKVMTSHMDDLNQEAIS 263



 Score = 34.5 bits (77), Expect = 5.4,   Method: Composition-based stats.
 Identities = 9/38 (23%), Positives = 16/38 (42%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGS 41
          +    + A   +  Q  R+ +I+ N+AN  T G     
Sbjct: 1  MNNGYYQATGAMVTQFNRLDVIANNLANINTIGFKRDD 38


>gi|157160604|ref|YP_001457922.1| flagellar basal body rod protein FlgF [Escherichia coli HS]
 gi|157066284|gb|ABV05539.1| flagellar basal-body rod protein FlgF [Escherichia coli HS]
          Length = 251

 Score = 38.7 bits (88), Expect = 0.29,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 32/102 (31%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           N     +T       +   +    +        +     Q+T          +   SG++
Sbjct: 147 NPGDPVNTVAPVGRLKLVKATGSEVQRGDDGIFRLSAESQATRGPILQADPTLRVMSGVL 206

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NVN +   +DM  + R +   ++ I    D       LL
Sbjct: 207 EGSNVNAVAAMSDMIASARRFEMQMKVISSVDDNAGRANQLL 248


>gi|163850121|ref|YP_001638164.1| flagellar basal body rod protein [Methylobacterium extorquens PA1]
 gi|240137255|ref|YP_002961724.1| Flagellar basal-body rod protein flgF [Methylobacterium extorquens
           AM1]
 gi|254559266|ref|YP_003066361.1| flagellar basal-body rod protein flgF [Methylobacterium extorquens
           DM4]
 gi|163661726|gb|ABY29093.1| flagellar basal body rod protein [Methylobacterium extorquens PA1]
 gi|240007221|gb|ACS38447.1| Flagellar basal-body rod protein flgF [Methylobacterium extorquens
           AM1]
 gi|254266544|emb|CAX22308.1| Flagellar basal-body rod protein flgF [Methylobacterium extorquens
           DM4]
          Length = 242

 Score = 38.7 bits (88), Expect = 0.29,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 18/43 (41%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
            G V+  NVN ++E   +    R + +      ++   +T  +
Sbjct: 193 QGYVEGANVNPIMEMTRLIAIQRAFESAATMTSEADTTLTGAV 235


>gi|88799029|ref|ZP_01114610.1| Flagellar hook-associated protein [Reinekea sp. MED297]
 gi|88778256|gb|EAR09450.1| Flagellar hook-associated protein [Reinekea sp. MED297]
          Length = 1025

 Score = 38.7 bits (88), Expect = 0.29,   Method: Composition-based stats.
 Identities = 16/103 (15%), Positives = 30/103 (29%), Gaps = 4/103 (3%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           ++    A +G+      ++    NI+NA T G +            F  V +   GV + 
Sbjct: 1   MSLLSTAITGIKAHQTALETTGHNISNANTPGYSRQEAVMATNNPLFRGVGYIGQGVNIS 60

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
            +      F+          + S           +E  D    
Sbjct: 61  TVRRVTDEFLTIQ----LRQDTSTFHDLQTYRESIEQVDRILA 99


>gi|238758109|ref|ZP_04619289.1| Flagellar basal-body rod protein flgF [Yersinia aldovae ATCC 35236]
 gi|238703647|gb|EEP96184.1| Flagellar basal-body rod protein flgF [Yersinia aldovae ATCC 35236]
          Length = 251

 Score = 38.7 bits (88), Expect = 0.29,   Method: Composition-based stats.
 Identities = 13/102 (12%), Positives = 29/102 (28%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           NA  + +T       ++  +    +              Q     +      +    G++
Sbjct: 147 NAGDSPNTIAQLGQIKRVKATAGEVMHGDDGLFHLTPATQQARGAQLANDPLIKIMPGVL 206

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NV  +    DM    R +   ++ I    +       LL
Sbjct: 207 EGSNVKAVEAMTDMIANARSFEMQMKVIHSVDENEQRANQLL 248


>gi|220927553|ref|YP_002504462.1| flagellar hook-associated protein FlgK [Clostridium cellulolyticum
           H10]
 gi|219997881|gb|ACL74482.1| flagellar hook-associated protein FlgK [Clostridium cellulolyticum
           H10]
          Length = 708

 Score = 38.7 bits (88), Expect = 0.29,   Method: Composition-based stats.
 Identities = 18/122 (14%), Positives = 38/122 (31%), Gaps = 8/122 (6%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
           +I  S  A +      +++ IAN R       S         +  ++   G   ++   +
Sbjct: 588 NITASKTAAKG--DNTVAKQIANLRDVDILVNSTGRVSIDEYYRNLILELGNGGMEAERI 645

Query: 69  DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
             S                       V++  E ++M +    Y A+ + +     MM T 
Sbjct: 646 ATSQATVVNAVDAQRN------AISGVSMDEEMSNMMKYKFAYDASSRVLNIMDSMMETI 699

Query: 129 LD 130
           + 
Sbjct: 700 IT 701


>gi|152975186|ref|YP_001374703.1| flagellar basal body rod protein FlgG [Bacillus cereus subsp.
           cytotoxis NVH 391-98]
 gi|152023938|gb|ABS21708.1| flagellar basal body rod protein [Bacillus cytotoxicus NVH 391-98]
          Length = 257

 Score = 38.7 bits (88), Expect = 0.29,   Method: Composition-based stats.
 Identities = 10/56 (17%), Positives = 25/56 (44%), Gaps = 1/56 (1%)

Query: 79  PGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT-TLDLLR 133
           P    A  + +++  NV++  E AD+    ++  A+ + +     +      ++LR
Sbjct: 202 PNGTGAVRNYMLENSNVDMTKEMADIMTNQKMVQASQRIMTSFDKIYEKEANEILR 257


>gi|238788320|ref|ZP_04632114.1| Flagellar hook-associated protein 1 [Yersinia frederiksenii ATCC
           33641]
 gi|238723566|gb|EEQ15212.1| Flagellar hook-associated protein 1 [Yersinia frederiksenii ATCC
           33641]
          Length = 550

 Score = 38.7 bits (88), Expect = 0.29,   Method: Composition-based stats.
 Identities = 15/99 (15%), Positives = 34/99 (34%)

Query: 8   AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
            + A SGL+     +  +S NI+N +  G    +  + +   +         GV V  + 
Sbjct: 1   MNTAMSGLSAAQYALSTVSNNISNYQVAGYNRQNTIFAQSGGTLSPAGFVGNGVAVTGVN 60

Query: 68  VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
            + ++F+          ++     Y  V+ +        
Sbjct: 61  REYNSFITNQLRSAQTQSSGLTTYYQQVSQIDNLLSNTS 99


>gi|269103183|ref|ZP_06155880.1| flagellar hook-associated protein FlgK [Photobacterium damselae
           subsp. damselae CIP 102761]
 gi|268163081|gb|EEZ41577.1| flagellar hook-associated protein FlgK [Photobacterium damselae
           subsp. damselae CIP 102761]
          Length = 661

 Score = 38.7 bits (88), Expect = 0.30,   Method: Composition-based stats.
 Identities = 15/98 (15%), Positives = 30/98 (30%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           +    I  SGL     ++ + S NI+N  T G +      +     +    +   G  + 
Sbjct: 3   LDLMQIGMSGLRTSQKQLDVASHNISNVNTPGYSRQVVEQKADDAFYNGSNYYGTGAYID 62

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETA 102
            +      F                V+  N+ +L +  
Sbjct: 63  NVSRAYDQFAARELTLSTTHLEEANVRQQNMMMLDDFT 100


>gi|330502740|ref|YP_004379609.1| flagellar hook-associated protein FlgK [Pseudomonas mendocina
           NK-01]
 gi|328917026|gb|AEB57857.1| flagellar hook-associated protein FlgK [Pseudomonas mendocina
           NK-01]
          Length = 681

 Score = 38.7 bits (88), Expect = 0.30,   Method: Composition-based stats.
 Identities = 17/99 (17%), Positives = 30/99 (30%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +    +I  SGLA     + +   NI N  T G +        +T  F    +   G  +
Sbjct: 1   MADLLNIGLSGLAANKTSLAVTGHNIVNVNTPGFSRQETIQATRTPQFSGAGYIGSGTTL 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETA 102
             +    + F+          N+        +N L    
Sbjct: 61  TDVRRIYNDFLNTQVRSSTALNSDTKAYLSQINQLDSLL 99


>gi|172061965|ref|YP_001809617.1| flagellar hook-associated protein FlgK [Burkholderia ambifaria
           MC40-6]
 gi|171994482|gb|ACB65401.1| flagellar hook-associated protein FlgK [Burkholderia ambifaria
           MC40-6]
          Length = 665

 Score = 38.7 bits (88), Expect = 0.30,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 20/39 (51%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN   E A++ +  +LY AN + I+ +  +  T L L
Sbjct: 625 SGVNQNEEAANLMQYQQLYQANAKVIQTAATLFQTVLGL 663



 Score = 34.5 bits (77), Expect = 4.9,   Method: Composition-based stats.
 Identities = 16/95 (16%), Positives = 30/95 (31%)

Query: 8   AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
            ++  SGL      +    +NI+NA T G +     Y   +  +    +   GV    + 
Sbjct: 6   MNLGVSGLNAALWGLTTTGQNISNAATPGYSVERPVYAEASGQYTSSGYMPQGVNTVTVQ 65

Query: 68  VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETA 102
              S ++ +          +    Y  V  L    
Sbjct: 66  RQYSQYLSDQLNSAQSQGGALSTWYSLVAQLNNYV 100


>gi|28869143|ref|NP_791762.1| flagellar basal-body rod protein FlgF [Pseudomonas syringae pv.
           tomato str. DC3000]
 gi|213967580|ref|ZP_03395728.1| flagellar basal-body rod protein FlgF [Pseudomonas syringae pv.
           tomato T1]
 gi|301385715|ref|ZP_07234133.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv.
           tomato Max13]
 gi|302060072|ref|ZP_07251613.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv.
           tomato K40]
 gi|302134831|ref|ZP_07260821.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv.
           tomato NCPPB 1108]
 gi|28852383|gb|AAO55457.1| flagellar basal-body rod protein FlgF [Pseudomonas syringae pv.
           tomato str. DC3000]
 gi|213927881|gb|EEB61428.1| flagellar basal-body rod protein FlgF [Pseudomonas syringae pv.
           tomato T1]
 gi|331017023|gb|EGH97079.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv.
           lachrymans str. M302278PT]
          Length = 246

 Score = 38.7 bits (88), Expect = 0.30,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 23/56 (41%), Gaps = 3/56 (5%)

Query: 80  GHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS---HDMMTTTLDLL 132
              V   SG ++  NVN + E   +   +R +  +++ +K +      M   L L 
Sbjct: 191 DATVQVESGFLQASNVNAVEEMTSVLALSRQFELHVKMMKTAEEDDQSMARVLQLG 246


>gi|253688966|ref|YP_003018156.1| flagellar hook-associated protein FlgK [Pectobacterium
          carotovorum subsp. carotovorum PC1]
 gi|251755544|gb|ACT13620.1| flagellar hook-associated protein FlgK [Pectobacterium
          carotovorum subsp. carotovorum PC1]
          Length = 568

 Score = 38.7 bits (88), Expect = 0.30,   Method: Composition-based stats.
 Identities = 19/96 (19%), Positives = 35/96 (36%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +    + A SGL      +  +S NI+N   TG +  +    + T S     +   GV V
Sbjct: 1  MSNLINTAMSGLKGAQVALSTVSNNISNQAVTGYSRQNAILEQATSSSTSAGYIGNGVNV 60

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
            I    + F+          ++S    Y  ++ + 
Sbjct: 61 VSINRQYNEFITNQLRAAQTTSSSVTAYYEQISKID 96


>gi|34557691|ref|NP_907506.1| hypothetical protein WS1332 [Wolinella succinogenes DSM 1740]
 gi|34483408|emb|CAE10406.1| hypothetical protein WS1332 [Wolinella succinogenes]
          Length = 94

 Score = 38.7 bits (88), Expect = 0.30,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 33/125 (26%), Gaps = 32/125 (25%)

Query: 8   AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
             I  S +   S+ M   S N+AN  T G                      G        
Sbjct: 1   MQINASSIQAHSSWMNNSSHNVANVNTQGFGALQTNLEESPTQGITANSSKGEG------ 54

Query: 68  VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
                                       ++  E  +     R   AN QTIK  HD++ T
Sbjct: 55  --------------------------ATDLAKELPEQMIAERGIEANAQTIKTYHDVLGT 88

Query: 128 TLDLL 132
            LDL 
Sbjct: 89  VLDLK 93


>gi|172058468|ref|YP_001814928.1| flagellar hook-associated protein FlgK [Exiguobacterium sibiricum
           255-15]
 gi|171990989|gb|ACB61911.1| flagellar hook-associated protein FlgK [Exiguobacterium sibiricum
           255-15]
          Length = 509

 Score = 38.7 bits (88), Expect = 0.30,   Method: Composition-based stats.
 Identities = 7/38 (18%), Positives = 15/38 (39%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             V++  E   M +    Y A  + I    +M+   ++
Sbjct: 465 SAVSIDEEMTMMIQYQHAYNAAARNITTVDEMLDKIIN 502


>gi|212637786|ref|YP_002314311.1| flagellar basal body rod protein [Shewanella piezotolerans WP3]
 gi|212559270|gb|ACJ31724.1| Flagellar basal body rod protein [Shewanella piezotolerans WP3]
          Length = 244

 Score = 38.7 bits (88), Expect = 0.31,   Method: Composition-based stats.
 Identities = 12/61 (19%), Positives = 25/61 (40%)

Query: 74  VEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            +       V  +SG ++  NV  + E     + +R +   ++ +K +  +      LLR
Sbjct: 183 RQPLPANDEVTVSSGFLEASNVQAVGELIAAMDLSRQFEIQVKLMKSAEKLAEAGNRLLR 242

Query: 134 D 134
           D
Sbjct: 243 D 243


>gi|197104256|ref|YP_002129633.1| flagellar hook-associated protein [Phenylobacterium zucineum
          HLK1]
 gi|196477676|gb|ACG77204.1| flagellar hook-associated protein [Phenylobacterium zucineum
          HLK1]
          Length = 700

 Score = 38.7 bits (88), Expect = 0.31,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 7/64 (10%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            L  +   A SGL    A ++ +S+NIAN  T G       Y RK +  + ++    G+
Sbjct: 1  MSLNVTLQTAASGLNAAQASLRAVSDNIANVNTPG-------YVRKAVVQQPLVVDGVGM 53

Query: 62 RVKK 65
           V+ 
Sbjct: 54 GVRV 57


>gi|254419855|ref|ZP_05033579.1| conserved domain protein [Brevundimonas sp. BAL3]
 gi|196186032|gb|EDX81008.1| conserved domain protein [Brevundimonas sp. BAL3]
          Length = 246

 Score = 38.7 bits (88), Expect = 0.31,   Method: Composition-based stats.
 Identities = 12/50 (24%), Positives = 26/50 (52%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           + V    G ++  NVN L E  ++ E +R Y +  + I+ ++D+    ++
Sbjct: 191 NDVQIHQGSLEASNVNSLTEITNLIEISRAYESITRMIENTNDLSRRAVE 240


>gi|170694400|ref|ZP_02885554.1| flagellar hook-associated protein FlgK [Burkholderia graminis
           C4D1M]
 gi|170140823|gb|EDT08997.1| flagellar hook-associated protein FlgK [Burkholderia graminis
           C4D1M]
          Length = 657

 Score = 38.7 bits (88), Expect = 0.31,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 22/41 (53%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             VN+  E A++ +  +LY AN + I+ +  +  T L + +
Sbjct: 617 SGVNINEEAANLLQYQQLYQANSKVIQTAQTLFQTLLGIFQ 657


>gi|322432968|ref|YP_004210217.1| flagellar hook-associated protein FlgK [Acidobacterium sp.
          MP5ACTX9]
 gi|321165195|gb|ADW70899.1| flagellar hook-associated protein FlgK [Acidobacterium sp.
          MP5ACTX9]
          Length = 457

 Score = 38.7 bits (88), Expect = 0.31,   Method: Composition-based stats.
 Identities = 19/88 (21%), Positives = 35/88 (39%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  L+++ + A+  L  Q A + + + NIANA T G T  +   +    + +  +    G
Sbjct: 1  MISLMSTLNTASEALMAQEAEISVTNNNIANASTAGYTRETVSLQEAAPTSQGALSVGNG 60

Query: 61 VRVKKIGVDQSTFVEEFDPGHPVANASG 88
          V V  I   ++  +            S 
Sbjct: 61 VEVAGITSVRNELLTSRIQQQTSEQGSS 88



 Score = 33.7 bits (75), Expect = 9.4,   Method: Composition-based stats.
 Identities = 7/39 (17%), Positives = 19/39 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             V++  E+A++    + Y A  + +     +  TT+++
Sbjct: 415 SGVSIDEESANLIRYQQAYEAAAKVVSTISTLFDTTINM 453


>gi|271500067|ref|YP_003333092.1| flagellar basal-body rod protein FlgF [Dickeya dadantii Ech586]
 gi|270343622|gb|ACZ76387.1| flagellar basal-body rod protein FlgF [Dickeya dadantii Ech586]
          Length = 251

 Score = 38.7 bits (88), Expect = 0.31,   Method: Composition-based stats.
 Identities = 14/105 (13%), Positives = 29/105 (27%)

Query: 28  NIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANAS 87
           N  N     +T       +   +    +        +     Q            V    
Sbjct: 144 NALNPSDAANTVTQIGRLKLVKATANEVVRGDDGFFRVSPAVQQQRGAVLQNDATVRVMP 203

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           G+++  NVN +    +M   +R +   ++ I    D       +L
Sbjct: 204 GVLEGSNVNTVESMVEMISNSRRFEMQMKVISSVDDNTQRANQIL 248


>gi|254470342|ref|ZP_05083746.1| flagellar basal-body rod protein [Pseudovibrio sp. JE062]
 gi|211960653|gb|EEA95849.1| flagellar basal-body rod protein [Pseudovibrio sp. JE062]
          Length = 246

 Score = 38.7 bits (88), Expect = 0.31,   Method: Composition-based stats.
 Identities = 10/54 (18%), Positives = 23/54 (42%)

Query: 77  FDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             P +      G ++  NV  + E + M E  R Y +  + + Q +++   ++ 
Sbjct: 186 PIPANNPTVIQGALEGSNVEGVREISRMIEITRQYQSVSKMMSQRNELRQRSIR 239


>gi|161526179|ref|YP_001581191.1| flagellar hook-associated protein FlgK [Burkholderia multivorans
           ATCC 17616]
 gi|189349105|ref|YP_001944733.1| flagellar hook-associated protein FlgK [Burkholderia multivorans
           ATCC 17616]
 gi|160343608|gb|ABX16694.1| flagellar hook-associated protein FlgK [Burkholderia multivorans
           ATCC 17616]
 gi|189333127|dbj|BAG42197.1| flagellar hook-associated protein 1 [Burkholderia multivorans ATCC
           17616]
          Length = 659

 Score = 38.3 bits (87), Expect = 0.31,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 20/39 (51%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN   E A++ +  +LY AN + I+ +  +  T L L
Sbjct: 619 SGVNQNEEAANLMQYQQLYQANAKVIQTAATLFQTVLGL 657


>gi|255322393|ref|ZP_05363539.1| flagellar basal-body rod protein [Campylobacter showae RM3277]
 gi|255300766|gb|EET80037.1| flagellar basal-body rod protein [Campylobacter showae RM3277]
          Length = 270

 Score = 38.3 bits (87), Expect = 0.31,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 15/43 (34%), Gaps = 1/43 (2%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQS-HDMMTTTLD 130
             +  NVN + E   + ET R      + +     D+    + 
Sbjct: 221 YTQISNVNAVTEMVGLIETQRFVEMYQKVMTSHMDDLNQEAIS 263



 Score = 34.1 bits (76), Expect = 6.1,   Method: Composition-based stats.
 Identities = 9/38 (23%), Positives = 16/38 (42%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGS 41
          +    + A   +  Q  R+ +I+ N+AN  T G     
Sbjct: 1  MNNGYYQATGAMVTQFNRLDVIANNLANINTIGFKRDD 38


>gi|330808201|ref|YP_004352663.1| flagellar hook-associated protein [Pseudomonas brassicacearum
           subsp. brassicacearum NFM421]
 gi|327376309|gb|AEA67659.1| flagellar hook-associated protein [Pseudomonas brassicacearum
           subsp. brassicacearum NFM421]
          Length = 688

 Score = 38.3 bits (87), Expect = 0.32,   Method: Composition-based stats.
 Identities = 16/98 (16%), Positives = 30/98 (30%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           ++  +I  SGL+     +     NIAN  T G +        K  +    +    G  + 
Sbjct: 1   MSLLNIGMSGLSASQTALVTTGNNIANVDTAGYSRQQTVQTTKASNQYGNVFIGSGTTLA 60

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETA 102
            +    + F+E         N+        +  L    
Sbjct: 61  DVRRVYNAFLEAQLKTTTSLNSDAAAYQGQITPLDSLL 98


>gi|188991644|ref|YP_001903654.1| flagellar basal body rod protein FlgB [Xanthomonas campestris pv.
           campestris str. B100]
 gi|167733404|emb|CAP51605.1| unnamed protein product [Xanthomonas campestris pv. campestris]
          Length = 224

 Score = 38.3 bits (87), Expect = 0.32,   Method: Composition-based stats.
 Identities = 19/125 (15%), Positives = 37/125 (29%), Gaps = 1/125 (0%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
               +   I    L ++  RM++I+ N++N  T G       +     + E V  G    
Sbjct: 94  SPFTSFLGIHGDALTLREQRMKLIASNLSNVDTPGYKAKDLNFEAALKAAEGVRDGGLMQ 153

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ- 120
                  +  +                 +    V+   E A        Y A+L  ++  
Sbjct: 154 ATDAKHYEIGSTAGLNPFQITREADQPSLDGNTVDPDAERAAYGRAALEYRASLSFLESK 213

Query: 121 SHDMM 125
              M+
Sbjct: 214 VRSML 218


>gi|229541552|ref|ZP_04430612.1| flagellar hook-associated protein FlgK [Bacillus coagulans 36D1]
 gi|229325972|gb|EEN91647.1| flagellar hook-associated protein FlgK [Bacillus coagulans 36D1]
          Length = 538

 Score = 38.3 bits (87), Expect = 0.32,   Method: Composition-based stats.
 Identities = 8/38 (21%), Positives = 19/38 (50%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            +V+V  E  +M +  + Y A  + I  + +M+   ++
Sbjct: 494 SSVSVDEELTNMIKYQQAYNAAARMITMTDEMLDKIIN 531



 Score = 36.4 bits (82), Expect = 1.4,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 22/78 (28%), Gaps = 1/78 (1%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M         A   L  Q   +  + +N+ANA T G T      +         M+    
Sbjct: 1  MSTFF-GLETAKRALTAQQNALYTVGQNVANANTDGYTRQRVNLQATDPYPAASMNRPAI 59

Query: 61 VRVKKIGVDQSTFVEEFD 78
                GV+        D
Sbjct: 60 AGQLGTGVEAGEVQRIRD 77


>gi|152989404|ref|YP_001349644.1| flagellar hook-associated protein FlgK [Pseudomonas aeruginosa
          PA7]
 gi|150964562|gb|ABR86587.1| flagellar hook-associated protein FlgK [Pseudomonas aeruginosa
          PA7]
          Length = 682

 Score = 38.3 bits (87), Expect = 0.32,   Method: Composition-based stats.
 Identities = 16/96 (16%), Positives = 30/96 (31%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +     I  SGL      + +   NI N +T G +  S   + +   F    +   G ++
Sbjct: 1  MSDLLSIGLSGLGTSQTWLTVTGHNITNVKTPGYSRQSAIQQTQVPQFSGAGYMGSGSQI 60

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
            +    S F+          N+        +  L 
Sbjct: 61 VDVRRLASDFLTGQLRNATSQNSELSAFRSQIEQLD 96



 Score = 34.1 bits (76), Expect = 6.1,   Method: Composition-based stats.
 Identities = 12/84 (14%), Positives = 31/84 (36%), Gaps = 2/84 (2%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHP--VANASGIVKYPNVNVLVETADMR 105
           T +     + + G  V+++G   +      +                  V++  E A++ 
Sbjct: 595 TDNTGSTYNEAYGGLVERVGTLTAQVRASSEASATVLKQAQDSRDSLSGVSLDEEAANLI 654

Query: 106 ETNRLYMANLQTIKQSHDMMTTTL 129
           +  + Y A+ Q I+ +  +  T +
Sbjct: 655 QFQQYYSASAQVIQVARTLFDTLI 678


>gi|307945655|ref|ZP_07660991.1| flagellar basal-body rod protein FlgB [Roseibium sp. TrichSKD4]
 gi|307771528|gb|EFO30753.1| flagellar basal-body rod protein FlgB [Roseibium sp. TrichSKD4]
          Length = 138

 Score = 38.3 bits (87), Expect = 0.32,   Method: Composition-based stats.
 Identities = 19/128 (14%), Positives = 33/128 (25%), Gaps = 3/128 (2%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            L  +     S +     R  ++SEN+ANA T   +                  G     
Sbjct: 11  PLFQALK---SKMQWHQVRQGVLSENVANADTPRYSAREVTAFSFADHVGLAQSGLSTSV 67

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
            K   +  S                      NV +  +   + +    Y A      +  
Sbjct: 68  TKVGHISGSAAPGVASKAEERDMFEVTPSGNNVVLEEQMMKVTQNQMDYQAATTLYSRGL 127

Query: 123 DMMTTTLD 130
            ++ T L 
Sbjct: 128 GLIRTALS 135


>gi|295678051|ref|YP_003606575.1| flagellar hook-associated protein FlgK [Burkholderia sp. CCGE1002]
 gi|295437894|gb|ADG17064.1| flagellar hook-associated protein FlgK [Burkholderia sp. CCGE1002]
          Length = 664

 Score = 38.3 bits (87), Expect = 0.32,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 21/39 (53%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN+  E A++ +  +LY AN + I+ +  +  T L +
Sbjct: 624 SGVNINEEAANLLQYQQLYQANSKVIQTAQTLFQTLLGI 662


>gi|238927421|ref|ZP_04659181.1| flagellar basal body rod protein [Selenomonas flueggei ATCC 43531]
 gi|238884703|gb|EEQ48341.1| flagellar basal body rod protein [Selenomonas flueggei ATCC 43531]
          Length = 139

 Score = 38.3 bits (87), Expect = 0.32,   Method: Composition-based stats.
 Identities = 18/127 (14%), Positives = 41/127 (32%), Gaps = 18/127 (14%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
            +   +++  L+  + R +++S NIAN           PY R++    E +         
Sbjct: 8   TSVIDVSSRALSAANLRHEVLSNNIANVN--------TPYFRRSHVRFEDLLRKELGLED 59

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYP----------NVNVLVETADMRETNRLYMAN 114
              +      +   P          ++            NV++ +E A++ +    Y A 
Sbjct: 60  DPLMKLVRTHDRHLPIPYHGKTHAFIEQESTTNMRLDGNNVDIDIEMAEVAKNQLYYNAL 119

Query: 115 LQTIKQS 121
              +   
Sbjct: 120 ANQMSSH 126


>gi|209521596|ref|ZP_03270294.1| flagellar hook-associated protein FlgK [Burkholderia sp. H160]
 gi|209497979|gb|EDZ98136.1| flagellar hook-associated protein FlgK [Burkholderia sp. H160]
          Length = 664

 Score = 38.3 bits (87), Expect = 0.32,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 21/39 (53%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN+  E A++ +  +LY AN + I+ +  +  T L +
Sbjct: 624 SGVNINEEAANLLQYQQLYQANSKVIQTAQTLFQTLLGI 662



 Score = 33.7 bits (75), Expect = 9.2,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 26/69 (37%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
              +I  SGL+     +    ENI+NA T G T  +  Y     ++    +   GV   
Sbjct: 3  SNLLNIGLSGLSAAQWGLTTTGENISNASTAGYTMETPVYSEVGGTYTGSGYLPMGVSTD 62

Query: 65 KIGVDQSTF 73
           +    S +
Sbjct: 63 TVTRAYSQY 71


>gi|89056689|ref|YP_512140.1| flagellar basal body rod protein FlgB [Jannaschia sp. CCS1]
 gi|88866238|gb|ABD57115.1| flagellar basal-body rod protein FlgB [Jannaschia sp. CCS1]
          Length = 117

 Score = 38.3 bits (87), Expect = 0.32,   Method: Composition-based stats.
 Identities = 26/129 (20%), Positives = 44/129 (34%), Gaps = 17/129 (13%)

Query: 4   LIASAHI--ANSGLAVQSA-RMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           +     I    SGLA  SA R  ++++NIANA T G         ++T          G 
Sbjct: 1   MFEGLEIFQLASGLARHSASRQAVVAQNIANADTPGYRARDVADFQQTWRNMTAEAREGR 60

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
             V    +D  T                     +V++  E     E  R +   L+    
Sbjct: 61  TEVPMRVIDARTPASPN--------------GNSVSLEFEMLRGIEAQRAHSRALRVYGS 106

Query: 121 SHDMMTTTL 129
           +  ++ T++
Sbjct: 107 AMTILRTSI 115


>gi|294500942|ref|YP_003564642.1| flagellar basal-body rod protein FlgB [Bacillus megaterium QM
           B1551]
 gi|294350879|gb|ADE71208.1| flagellar basal-body rod protein FlgB [Bacillus megaterium QM
           B1551]
          Length = 129

 Score = 38.3 bits (87), Expect = 0.32,   Method: Composition-based stats.
 Identities = 25/113 (22%), Positives = 40/113 (35%), Gaps = 4/113 (3%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M     +     +G++  S + Q I++NIAN  T      +     +          +  
Sbjct: 1   MSLFSTTFQTIENGISYASQKQQTIAQNIANVDTPNYKSKTVSRTSEFRDLLHNELEAYQ 60

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
              K I    S+       G+    A+G     NV++  E ADM E    Y A
Sbjct: 61  TDSKHIPFSDSSQRAITQQGNTSYQANGN----NVDMDKEMADMAENQIYYEA 109


>gi|148358807|ref|YP_001250014.1| flagellar basal body rod protein FlgF [Legionella pneumophila str.
           Corby]
 gi|296106852|ref|YP_003618552.1| flagellar basal-body rod protein FlgF [Legionella pneumophila
           2300/99 Alcoy]
 gi|148280580|gb|ABQ54668.1| flagellar basal body rod protein FlgF [Legionella pneumophila str.
           Corby]
 gi|295648753|gb|ADG24600.1| flagellar basal-body rod protein FlgF [Legionella pneumophila
           2300/99 Alcoy]
          Length = 248

 Score = 38.3 bits (87), Expect = 0.32,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 20/48 (41%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            SG ++  NVN + +   M    R + A ++ +    D       LL+
Sbjct: 200 QSGALEGSNVNAIDQMVAMISAGREFDAQMKLLSTVDDNGQKLAQLLQ 247


>gi|167645397|ref|YP_001683060.1| flagellar basal body rod protein [Caulobacter sp. K31]
 gi|167347827|gb|ABZ70562.1| flagellar basal body rod protein [Caulobacter sp. K31]
          Length = 245

 Score = 38.3 bits (87), Expect = 0.32,   Method: Composition-based stats.
 Identities = 10/54 (18%), Positives = 25/54 (46%)

Query: 77  FDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             P    A   G+++  NV  + +   + E NR Y +  + + Q+ ++  + ++
Sbjct: 186 PQPATNAAIHQGMLEASNVESIKQITKLIEVNRAYESVAKMMDQTTELSRSAVE 239


>gi|34103021|gb|AAQ59384.1| flagellar hook-associated protein FlgK [Chromobacterium violaceum
           ATCC 12472]
          Length = 438

 Score = 38.3 bits (87), Expect = 0.32,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 20/40 (50%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
             V    E   + E  ++Y AN++ I  ++ +  +TL +L
Sbjct: 399 SGVQRDEEAVSLIEYQKMYQANMKVIAVANQLFESTLAIL 438


>gi|324007917|gb|EGB77136.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 57-2]
          Length = 251

 Score = 38.3 bits (87), Expect = 0.33,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 32/102 (31%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           N     +T       +   +    +        +     Q+T          +   SG++
Sbjct: 147 NPGDPANTVALVGRLKLVKATGSEVQRGDDGIFRLSAESQATRGPVLLADPTLRVMSGVL 206

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NVN +   +DM  + R +   ++ I    D       LL
Sbjct: 207 EGSNVNAVAAMSDMIASARRFEMQMKVISSVDDNAGRANQLL 248


>gi|325524325|gb|EGD02427.1| flagellar hook-associated protein FlgK [Burkholderia sp. TJI49]
          Length = 599

 Score = 38.3 bits (87), Expect = 0.33,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 20/39 (51%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN   E A++ +  +LY AN + I+ +  +  T L L
Sbjct: 559 SGVNQNEEAANLMQYQQLYQANAKVIQTAATLFQTVLGL 597


>gi|241765797|ref|ZP_04763738.1| flagellar hook-associated protein FlgK [Acidovorax delafieldii 2AN]
 gi|241364308|gb|EER59458.1| flagellar hook-associated protein FlgK [Acidovorax delafieldii 2AN]
          Length = 664

 Score = 38.3 bits (87), Expect = 0.33,   Method: Composition-based stats.
 Identities = 17/96 (17%), Positives = 33/96 (34%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           ++  ++    L      +Q    NIAN  T G +  +   +     F    +   GV V+
Sbjct: 1   MSLLNVGARALLANQVALQTAGHNIANVNTPGYSRQTVVLQTVQGQFTGGGYIGQGVDVQ 60

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVE 100
            I  +QS  +           ++   +   +  L E
Sbjct: 61  TILRNQSELLTRQAAAAGSTQSADATRAERLRQLQE 96


>gi|237752809|ref|ZP_04583289.1| flagellar basal-body rod protein flgG [Helicobacter winghamensis
           ATCC BAA-430]
 gi|229376298|gb|EEO26389.1| flagellar basal-body rod protein flgG [Helicobacter winghamensis
           ATCC BAA-430]
          Length = 277

 Score = 38.3 bits (87), Expect = 0.33,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 24/56 (42%), Gaps = 1/56 (1%)

Query: 76  EFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS-HDMMTTTLD 130
                   A   G ++  N+NV+ E   + ETNRL  A  + +K    ++ T  + 
Sbjct: 216 REALERSGAVRQGFLEKSNINVVQEMTGLIETNRLVEAYSKVLKTHMDELNTEAIT 271



 Score = 36.0 bits (81), Expect = 2.0,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 36/113 (31%), Gaps = 14/113 (12%)

Query: 11  ANSGLAVQSARMQIISENIANARTTGDTPGSDP-------YRRKTISFEEVMHGSGGVRV 63
           +  G+  Q  R+ +I+ NIANA TTG              Y +               + 
Sbjct: 8   SVGGMVTQINRLDVIANNIANANTTGFKRDDVVIGDFMRLYEQHKEFLPIDEQTKDAAQF 67

Query: 64  KKIGVDQSTFVEEFDPGHPVANASG-------IVKYPNVNVLVETADMRETNR 109
               +++   + E    + V             +   N+  +VET D     R
Sbjct: 68  YNRSLNRVPQIVEEYTDNKVGGMMITDNTFDFALSKENMYFMVETPDGIRYTR 120


>gi|167626156|ref|YP_001676450.1| flagellar basal-body rod protein FlgF [Shewanella halifaxensis
           HAW-EB4]
 gi|167356178|gb|ABZ78791.1| flagellar basal-body rod protein FlgF [Shewanella halifaxensis
           HAW-EB4]
          Length = 244

 Score = 38.3 bits (87), Expect = 0.33,   Method: Composition-based stats.
 Identities = 12/61 (19%), Positives = 26/61 (42%)

Query: 74  VEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            +       V+ +SG ++  NV  + E     + +R +   ++ +K +  +      LLR
Sbjct: 183 RQPLPASEQVSVSSGFLEASNVQAVGELIAAMDLSRQFEVQVKLMKSAEKLAEAGNRLLR 242

Query: 134 D 134
           D
Sbjct: 243 D 243


>gi|332799170|ref|YP_004460669.1| flagellar basal-body rod protein FlgB [Tepidanaerobacter sp. Re1]
 gi|332696905|gb|AEE91362.1| flagellar basal-body rod protein FlgB [Tepidanaerobacter sp. Re1]
          Length = 134

 Score = 38.3 bits (87), Expect = 0.33,   Method: Composition-based stats.
 Identities = 22/130 (16%), Positives = 44/130 (33%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M  L ++  +    L V+  R ++IS N+AN  T G       +    ++          
Sbjct: 1   MTDLFSNIDVMEKLLDVKLKRYELISNNLANVDTPGYKRMGMSFEEILMNSLNQRTIPLA 60

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
               K    +    +     +   + S      NV++  E  +M + N  Y      I  
Sbjct: 61  ATNDKHIDPRKKLEDIKPKIYRQEDYSFRNDENNVDIDKEMVEMIKNNFSYNIISDQIIT 120

Query: 121 SHDMMTTTLD 130
           +  ++ T + 
Sbjct: 121 NLKILQTAIS 130


>gi|229916660|ref|YP_002885306.1| flagellar hook-associated protein FlgK [Exiguobacterium sp. AT1b]
 gi|229468089|gb|ACQ69861.1| flagellar hook-associated protein FlgK [Exiguobacterium sp. AT1b]
          Length = 504

 Score = 38.3 bits (87), Expect = 0.33,   Method: Composition-based stats.
 Identities = 7/38 (18%), Positives = 15/38 (39%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             V++  E   M +    Y A  + I    +M+   ++
Sbjct: 460 SAVSLDEEMTMMIQYQHAYNAAARNITAVDEMLDKIIN 497


>gi|123442783|ref|YP_001006760.1| flagellar basal body rod protein FlgF [Yersinia enterocolitica
           subsp. enterocolitica 8081]
 gi|122089744|emb|CAL12597.1| flagellar basal-body rod protein FlgF [Yersinia enterocolitica
           subsp. enterocolitica 8081]
          Length = 251

 Score = 38.3 bits (87), Expect = 0.33,   Method: Composition-based stats.
 Identities = 14/102 (13%), Positives = 30/102 (29%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           NA  + +T       ++  +    +              Q     +      +    G++
Sbjct: 147 NAGDSPNTIAQLGQIKRVRATAGEVMHGDDGLFHLTPETQQARGAQLANDPLIKIMPGVL 206

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NV  +   ADM    R +   ++ I    +       LL
Sbjct: 207 EGSNVKAVEAMADMIANARSFEMQMKVIHSVDENEQRANQLL 248


>gi|148554188|ref|YP_001261770.1| flagellar basal-body rod protein FlgF [Sphingomonas wittichii RW1]
 gi|148499378|gb|ABQ67632.1| flagellar basal-body rod protein FlgF [Sphingomonas wittichii RW1]
          Length = 247

 Score = 38.3 bits (87), Expect = 0.33,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 25/52 (48%)

Query: 82  PVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             A   G ++  NVNV     DM E +R +   ++ +  + D+   + DL+R
Sbjct: 194 QAAVRQGAIEGSNVNVSTTLIDMIEASRDWDMQVKMMSSAQDIDKASADLMR 245


>gi|171322357|ref|ZP_02911181.1| flagellar hook-associated protein FlgK [Burkholderia ambifaria
           MEX-5]
 gi|171092319|gb|EDT37688.1| flagellar hook-associated protein FlgK [Burkholderia ambifaria
           MEX-5]
          Length = 665

 Score = 38.3 bits (87), Expect = 0.34,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 20/39 (51%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN   E A++ +  +LY AN + I+ +  +  T L L
Sbjct: 625 SGVNQNEEAANLMQYQQLYQANAKVIQTAATLFQTVLGL 663



 Score = 34.5 bits (77), Expect = 5.4,   Method: Composition-based stats.
 Identities = 16/95 (16%), Positives = 30/95 (31%)

Query: 8   AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
            ++  SGL      +    +NI+NA T G +     Y   +  +    +   GV    + 
Sbjct: 6   MNLGVSGLNAALWGLTTTGQNISNAATPGYSVERPVYAEASGQYTSSGYMPQGVNTVTVQ 65

Query: 68  VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETA 102
              S ++ +          +    Y  V  L    
Sbjct: 66  RQYSQYLSDQLNSAQSQGGALSTWYSLVAQLNNYV 100


>gi|149202207|ref|ZP_01879180.1| flagellar proximal rod protein FlgF [Roseovarius sp. TM1035]
 gi|149144305|gb|EDM32336.1| flagellar proximal rod protein FlgF [Roseovarius sp. TM1035]
          Length = 253

 Score = 38.3 bits (87), Expect = 0.34,   Method: Composition-based stats.
 Identities = 7/57 (12%), Positives = 21/57 (36%)

Query: 77  FDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             P        G ++  NVN + E     +  R +   ++ +  + ++  +    ++
Sbjct: 193 PPPNQQAEVLQGTLESSNVNPVEELLSTMQMQRNFELGMRMVLTARELDESGARTMQ 249


>gi|32477561|ref|NP_870555.1| flagellar hook protein FlgE [Rhodopirellula baltica SH 1]
 gi|32448115|emb|CAD77632.1| flagellar hook protein FlgE [Rhodopirellula baltica SH 1]
 gi|327543123|gb|EGF29559.1| flagellar hook protein FlgE [Rhodopirellula baltica WH47]
          Length = 811

 Score = 38.3 bits (87), Expect = 0.34,   Method: Composition-based stats.
 Identities = 9/86 (10%), Positives = 26/86 (30%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
             +    +   G     +          +           G ++  N ++  +  ++   
Sbjct: 726 RFANPAGLEARGLNLYAEGVNTGLPVTGQPGENGIGTVIGGALELSNTDIGKDLVELVLA 785

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  Y  N + I  +  ++   L+L R
Sbjct: 786 STQYRGNSRVITTTQQLIDELLNLRR 811



 Score = 38.3 bits (87), Expect = 0.34,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 22/46 (47%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRK 47
            L ++   A +GL+    ++ +I  N+ANA+T G       +  +
Sbjct: 1  MGLQSALTTALTGLSAAETQIDVIGNNLANAQTVGFKSSDAVFATQ 46


>gi|71735751|ref|YP_275560.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|289627765|ref|ZP_06460719.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv.
           aesculi str. NCPPB3681]
 gi|289651644|ref|ZP_06482987.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv.
           aesculi str. 2250]
 gi|71556304|gb|AAZ35515.1| flagellar basal-body rod protein FlgF [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|320325095|gb|EFW81164.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv.
           glycinea str. B076]
 gi|320329354|gb|EFW85347.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv.
           glycinea str. race 4]
 gi|330866424|gb|EGH01133.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv.
           aesculi str. 0893_23]
 gi|330880528|gb|EGH14677.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv.
           glycinea str. race 4]
 gi|330889082|gb|EGH21743.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv.
           mori str. 301020]
 gi|330986470|gb|EGH84573.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv.
           lachrymans str. M301315]
 gi|331011044|gb|EGH91100.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv.
           tabaci ATCC 11528]
          Length = 246

 Score = 38.3 bits (87), Expect = 0.34,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 23/56 (41%), Gaps = 3/56 (5%)

Query: 80  GHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS---HDMMTTTLDLL 132
              V   SG ++  NVN + E   +   +R +  +++ +K +      M   L L 
Sbjct: 191 DATVQVESGFLQASNVNAVEEMTSVLALSRQFELHVKMMKTAEEDDQSMARVLQLG 246


>gi|294140191|ref|YP_003556169.1| flagellar hook-associated protein FlgK [Shewanella violacea DSS12]
 gi|293326660|dbj|BAJ01391.1| flagellar hook-associated protein FlgK, putative [Shewanella
           violacea DSS12]
          Length = 638

 Score = 38.3 bits (87), Expect = 0.34,   Method: Composition-based stats.
 Identities = 13/101 (12%), Positives = 29/101 (28%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           +   +IA +G+    +++ + S NIANA T G                       G  + 
Sbjct: 3   MDLLNIARTGVLASQSQLAVTSNNIANANTQGYHRQVAEQSSLESQRFGDSFYGAGTYIS 62

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
            +    + +            +        ++ L +     
Sbjct: 63  DVKRIYNEYAARELRIGQTGVSGAQTTQTKMSELDQLFSQI 103



 Score = 35.6 bits (80), Expect = 2.1,   Method: Composition-based stats.
 Identities = 8/41 (19%), Positives = 21/41 (51%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             VN+  E A++    + Y A+ + +  ++++  T  + +R
Sbjct: 598 SGVNLDEEAANLMRFQQAYQASARIMTTANEIFETLFNAVR 638


>gi|163758009|ref|ZP_02165097.1| flagellar basal-body rod protein [Hoeflea phototrophica DFL-43]
 gi|162284298|gb|EDQ34581.1| flagellar basal-body rod protein [Hoeflea phototrophica DFL-43]
          Length = 241

 Score = 38.3 bits (87), Expect = 0.35,   Method: Composition-based stats.
 Identities = 13/77 (16%), Positives = 27/77 (35%)

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
            G  R   +GV  +   E            G ++  NVN ++E  ++   +R +      
Sbjct: 163 QGYYRQGSLGVVPNVPPEAVVDTAGTGLLQGYIEDSNVNPILEMTNLIMVSRAFENTSAM 222

Query: 118 IKQSHDMMTTTLDLLRD 134
            + + D+    +  L  
Sbjct: 223 TRATEDVFKEAIRTLGS 239


>gi|27381987|ref|NP_773516.1| flagellar basal body rod protein FlgB [Bradyrhizobium japonicum
           USDA 110]
 gi|27355157|dbj|BAC52141.1| flagellar basal-body rod protein [Bradyrhizobium japonicum USDA
           110]
          Length = 133

 Score = 38.3 bits (87), Expect = 0.35,   Method: Composition-based stats.
 Identities = 20/122 (16%), Positives = 40/122 (32%), Gaps = 4/122 (3%)

Query: 8   AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
             +A+S       R   I+ N+ANA     TPG      +  +                 
Sbjct: 14  FELASSQARYLELRQSTIATNVANAN----TPGFKARDVEPFNKVLDGMPVRLATTSPTH 69

Query: 68  VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
           +  S    +        +   +    +V++  E     + NR Y  N   ++  H M+ +
Sbjct: 70  MQLSATETDTRATSKKDSWDVVHSGNSVSLEQEMIKGNDVNRDYSMNSAVVRSFHRMLLS 129

Query: 128 TL 129
           ++
Sbjct: 130 SV 131


>gi|88858137|ref|ZP_01132779.1| flagellar hook-associated protein [Pseudoalteromonas tunicata D2]
 gi|88819754|gb|EAR29567.1| flagellar hook-associated protein [Pseudoalteromonas tunicata D2]
          Length = 681

 Score = 38.3 bits (87), Expect = 0.35,   Method: Composition-based stats.
 Identities = 17/98 (17%), Positives = 25/98 (25%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
                   SGLA     +     NIAN  TTG    +             +    G +V 
Sbjct: 3   FGILGTGVSGLAAAQKGLDTTGHNIANVNTTGYNRQTVEQISTVGIPFGGVFLGNGTQVS 62

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETA 102
            I    + F       +         +  N + L    
Sbjct: 63  SISRAFNEFSYTEVIYNKSQFNYNNTQTTNASRLDNFL 100


>gi|330967092|gb|EGH67352.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv.
           actinidiae str. M302091]
          Length = 246

 Score = 38.3 bits (87), Expect = 0.35,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 23/56 (41%), Gaps = 3/56 (5%)

Query: 80  GHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS---HDMMTTTLDLL 132
              V   SG ++  NVN + E   +   +R +  +++ +K +      M   L L 
Sbjct: 191 DATVQVESGFLQASNVNAVEEMTSVLALSRQFELHVKMMKTAEEDDQSMARVLQLG 246


>gi|313895777|ref|ZP_07829331.1| flagellar basal-body rod protein FlgB [Selenomonas sp. oral taxon
           137 str. F0430]
 gi|320529388|ref|ZP_08030476.1| flagellar basal-body rod protein FlgB [Selenomonas artemidis F0399]
 gi|312975202|gb|EFR40663.1| flagellar basal-body rod protein FlgB [Selenomonas sp. oral taxon
           137 str. F0430]
 gi|320138354|gb|EFW30248.1| flagellar basal-body rod protein FlgB [Selenomonas artemidis F0399]
          Length = 140

 Score = 38.3 bits (87), Expect = 0.35,   Method: Composition-based stats.
 Identities = 20/114 (17%), Positives = 43/114 (37%), Gaps = 8/114 (7%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
            ++  I +  LA  S R +++S NIAN  T         + R     ++ +  +    +K
Sbjct: 8   SSTLDIGSRALAAASLRHEVLSNNIANVNTPNFRRS---HVRFEDLLQKELGLAEDPLMK 64

Query: 65  KIGVDQSTFV-----EEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
            +      F      +        +  +  +   NV++ +E A++ +    Y A
Sbjct: 65  VVRTHDRHFPLAFRGKAHGVIEQDSTTNMRLDGNNVDIDIEMAEVAKNQLYYSA 118


>gi|307609978|emb|CBW99507.1| flagellar biosynthesis protein FlgF [Legionella pneumophila 130b]
          Length = 248

 Score = 38.3 bits (87), Expect = 0.35,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 20/48 (41%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            SG ++  NVN + +   M    R + A ++ +    D       LL+
Sbjct: 200 QSGALEGSNVNAIDQMVAMISAGREFDAQMKLLSTVDDNGQKLAQLLQ 247


>gi|317047697|ref|YP_004115345.1| flagellar hook-associated protein FlgK [Pantoea sp. At-9b]
 gi|316949314|gb|ADU68789.1| flagellar hook-associated protein FlgK [Pantoea sp. At-9b]
          Length = 547

 Score = 38.3 bits (87), Expect = 0.35,   Method: Composition-based stats.
 Identities = 16/96 (16%), Positives = 34/96 (35%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          + +  + A SGL+   A +   S NI+N    G T  +    +   +     +   GV V
Sbjct: 1  MSSIINSAMSGLSAAQAALSTTSNNISNYTVAGYTRQTTILGQANSTLSGNSYYGNGVTV 60

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
            +  +   F+            +   +Y  ++ + 
Sbjct: 61 TGVQREYDEFITAQLRSASATYNAQNTQYSQISNID 96


>gi|20141426|sp|Q44335|FLGB_AGRT5 RecName: Full=Flagellar basal-body rod protein flgB
          Length = 134

 Score = 38.3 bits (87), Expect = 0.35,   Method: Composition-based stats.
 Identities = 26/112 (23%), Positives = 39/112 (34%), Gaps = 2/112 (1%)

Query: 19  SARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFD 78
           S R ++++ NIANA T              +       G        +G    +      
Sbjct: 22  SVRQEVVATNIANANTPKFHAKDVSPFEAVMQATSQQVGMARTNPAHLGESTLS-ENIAV 80

Query: 79  PGHPVANASGIVKYPN-VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
             +PV N  G+ +  N V +  E     E  R Y  N   +K  H MM  T+
Sbjct: 81  RDNPVNNEIGMQESGNSVGLAEEMTKTGEIKRQYDLNASLVKSFHRMMLMTV 132


>gi|261821159|ref|YP_003259265.1| flagellar hook-associated protein FlgK [Pectobacterium wasabiae
          WPP163]
 gi|261605172|gb|ACX87658.1| flagellar hook-associated protein FlgK [Pectobacterium wasabiae
          WPP163]
          Length = 556

 Score = 38.3 bits (87), Expect = 0.35,   Method: Composition-based stats.
 Identities = 16/96 (16%), Positives = 33/96 (34%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +    + A SGL      +  +S NI+N    G +  +    +   S     +   GV V
Sbjct: 1  MSNLINTAMSGLKGAQVALSTVSNNISNQAVIGYSRQNTIIEQAISSSTSAGYIGNGVNV 60

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
            +    + F+          ++S    Y  ++ + 
Sbjct: 61 VSVDRQYNEFISNQLRSAQTTSSSVSTYYEQISKID 96


>gi|52841452|ref|YP_095251.1| flagellar basal body rod protein FlgF [Legionella pneumophila
           subsp. pneumophila str. Philadelphia 1]
 gi|52628563|gb|AAU27304.1| flagellar basal body rod protein FlgF [Legionella pneumophila
           subsp. pneumophila str. Philadelphia 1]
          Length = 248

 Score = 38.3 bits (87), Expect = 0.35,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 19/48 (39%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            SG ++  NV  + +   M    R + A ++ +    D       LL+
Sbjct: 200 QSGALEGSNVKAIDQMVAMISAGREFDAQMKLLSTVDDNGQKLAQLLQ 247


>gi|325288761|ref|YP_004264942.1| flagellar hook-associated protein FlgK [Syntrophobotulus glycolicus
           DSM 8271]
 gi|324964162|gb|ADY54941.1| flagellar hook-associated protein FlgK [Syntrophobotulus glycolicus
           DSM 8271]
          Length = 493

 Score = 38.3 bits (87), Expect = 0.36,   Method: Composition-based stats.
 Identities = 18/108 (16%), Positives = 36/108 (33%), Gaps = 5/108 (4%)

Query: 25  ISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVA 84
           ++ +IA A   G +  + P      S   +     G  V   GVD             + 
Sbjct: 383 VASSIA-ALAHGWSSAATPAEM--GSAASLGDYYNGNIVAVFGVDVQQAQRMTAVEDALI 439

Query: 85  NASGIVKYP--NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           N     +     V++  E  ++ +    Y A  + +    DM+   ++
Sbjct: 440 NQLSNRRDSVSGVSIDEEMTNLIKFQTAYSAAARMVTIMDDMLDKVVN 487



 Score = 34.1 bits (76), Expect = 6.4,   Method: Composition-based stats.
 Identities = 12/67 (17%), Positives = 18/67 (26%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M    A   +    L+ Q   +     NI+NA T G T               +   +  
Sbjct: 1  MGSTFAGLELGKRALSAQQLALNAAGHNISNASTQGYTRQVANLATTIPDQLYLFGHTQS 60

Query: 61 VRVKKIG 67
          V      
Sbjct: 61 VGTGVAV 67


>gi|313650471|gb|EFS14878.1| flagellar basal-body rod protein flgF [Shigella flexneri 2a str.
           2457T]
 gi|323165586|gb|EFZ51373.1| flagellar basal-body rod protein flgF [Shigella sonnei 53G]
 gi|332759653|gb|EGJ89958.1| flagellar basal-body rod protein flgF [Shigella flexneri 2747-71]
 gi|332761423|gb|EGJ91707.1| flagellar basal-body rod protein flgF [Shigella flexneri K-671]
 gi|333004887|gb|EGK24407.1| flagellar basal-body rod protein flgF [Shigella flexneri VA-6]
 gi|333005400|gb|EGK24918.1| flagellar basal-body rod protein flgF [Shigella flexneri K-218]
 gi|333019423|gb|EGK38706.1| flagellar basal-body rod protein flgF [Shigella flexneri K-304]
          Length = 132

 Score = 38.3 bits (87), Expect = 0.36,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 32/102 (31%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           N     +T       +   +    +        +     Q+T          +   SG++
Sbjct: 28  NPGDPANTVAPVGRLKLVKATGSEVQRGDDGIFRLSAETQATRGPVLQADPTLRVMSGVL 87

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NVN +   +DM  + R +   ++ I    D       LL
Sbjct: 88  EGSNVNAVAAMSDMIASARRFEMQMKVISSVDDNAGRANQLL 129


>gi|269796409|ref|YP_003315864.1| flagellar hook-associated protein FlgK [Sanguibacter keddieii DSM
           10542]
 gi|269098594|gb|ACZ23030.1| flagellar hook-associated protein FlgK [Sanguibacter keddieii DSM
           10542]
          Length = 475

 Score = 38.3 bits (87), Expect = 0.36,   Method: Composition-based stats.
 Identities = 21/123 (17%), Positives = 33/123 (26%), Gaps = 6/123 (4%)

Query: 11  ANSGLAVQSARMQIIS-ENIANARTTGDTPG--SDPYRRKTISFEEVMHGSGGVRVKKIG 67
           A  GL V       I+  N AN                 K               VK   
Sbjct: 349 AALGLRVAITSPSQIAVRNPANGANDTSVADAIGQLGASKDGPDTVWSTFVVSTGVKAKA 408

Query: 68  VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
             QS  V E             +   +V+   E+ +M    R Y    + +    +M+  
Sbjct: 409 ALQSATVAEAARQTAEGLQ---LAQTSVDQDEESINMLSFQRAYQGAARVMTAVDEMLDQ 465

Query: 128 TLD 130
            ++
Sbjct: 466 LIN 468


>gi|302185581|ref|ZP_07262254.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv.
           syringae 642]
 gi|330953725|gb|EGH53985.1| flagellar basal body rod protein FlgF [Pseudomonas syringae Cit 7]
          Length = 246

 Score = 38.3 bits (87), Expect = 0.36,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 23/56 (41%), Gaps = 3/56 (5%)

Query: 80  GHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS---HDMMTTTLDLL 132
              V   SG ++  NVN + E   +   +R +  +++ +K +      M   L L 
Sbjct: 191 DATVQVESGFLQASNVNAVEEMTSVLALSRQFELHVKMMKTAEEDDQSMARVLQLG 246


>gi|157376210|ref|YP_001474810.1| flagellar hook-associated protein FlgK [Shewanella sediminis
           HAW-EB3]
 gi|157318584|gb|ABV37682.1| flagellar hook-associated protein FlgK [Shewanella sediminis
           HAW-EB3]
          Length = 638

 Score = 38.3 bits (87), Expect = 0.36,   Method: Composition-based stats.
 Identities = 13/101 (12%), Positives = 31/101 (30%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           +   +IA +G+    +++ + S NIANA T G                       G  + 
Sbjct: 3   MNLLNIARTGVLASQSQLAVTSNNIANANTQGYHRQVAEQSSLESQRAGSEFYGSGTYIS 62

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
            +    + +          + +     +  ++ L +     
Sbjct: 63  DVKRIYNDYAARELRIGQTSASEAQTTHTKMSELDQLFSQI 103


>gi|330875985|gb|EGH10134.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
          Length = 246

 Score = 38.3 bits (87), Expect = 0.36,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 23/56 (41%), Gaps = 3/56 (5%)

Query: 80  GHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS---HDMMTTTLDLL 132
              V   SG ++  NVN + E   +   +R +  +++ +K +      M   L L 
Sbjct: 191 DATVQVESGFLQASNVNAVEEMTSVLALSRQFELHVKMMKTAEEDDQSMARVLQLG 246


>gi|222147568|ref|YP_002548525.1| flagellar basal body rod protein FlgB [Agrobacterium vitis S4]
 gi|221734556|gb|ACM35519.1| flagellar basal-body rod protein FlgB [Agrobacterium vitis S4]
          Length = 130

 Score = 38.3 bits (87), Expect = 0.36,   Method: Composition-based stats.
 Identities = 20/122 (16%), Positives = 36/122 (29%)

Query: 8   AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
             +A+      S R ++I+ NIANA T              +   +        +     
Sbjct: 7   FDVASRQAEWLSLRQEVIAGNIANANTPKFMAKDITPFNAILDVRQFGMARTNSKHMASS 66

Query: 68  VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
              +    +             V   +V +  E   M E  R +  N   +   + MM  
Sbjct: 67  DLNTDLDVDIREAPLNGEIGVQVSGNSVALADEMTKMGEIQRQHSLNTNLVSSFNRMMLM 126

Query: 128 TL 129
           T+
Sbjct: 127 TV 128


>gi|156934439|ref|YP_001438355.1| flagellar basal body rod protein FlgF [Cronobacter sakazakii ATCC
           BAA-894]
 gi|156532693|gb|ABU77519.1| hypothetical protein ESA_02270 [Cronobacter sakazakii ATCC BAA-894]
          Length = 252

 Score = 38.3 bits (87), Expect = 0.36,   Method: Composition-based stats.
 Identities = 14/102 (13%), Positives = 29/102 (28%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           N     +T       +   +  + +        +     Q+           V   SG++
Sbjct: 148 NPGDAPNTIAPVGRLKMVKASAKEVVRGDDGLFRLNQQAQTARGATLQADPTVTLMSGVL 207

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NV  +    DM    R +   ++ I    +       LL
Sbjct: 208 EGSNVKPVEAMTDMIANARRFEMQMKIITSVDENEQRANQLL 249


>gi|78067830|ref|YP_370599.1| flagellar hook-associated protein FlgK [Burkholderia sp. 383]
 gi|77968575|gb|ABB09955.1| conserved hypothetical protein [Burkholderia sp. 383]
          Length = 660

 Score = 38.3 bits (87), Expect = 0.36,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 19/39 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             V+   E A++ +  + Y AN + I+ +  +  T L L
Sbjct: 620 SGVSTNEEAANLMQYQQFYQANAKVIQTAATLFQTVLGL 658



 Score = 34.5 bits (77), Expect = 5.8,   Method: Composition-based stats.
 Identities = 13/66 (19%), Positives = 23/66 (34%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
           ++  SGL      +     NI+NA T G +     Y   +  +    +   GV    + 
Sbjct: 6  MNLGVSGLNAALWGLTTTGNNISNAATPGYSVQRPVYAEASSQYSGSGYMPQGVNTVTVQ 65

Query: 68 VDQSTF 73
             S +
Sbjct: 66 RQYSQY 71


>gi|23010476|ref|ZP_00051152.1| COG4786: Flagellar basal body rod protein [Magnetospirillum
           magnetotacticum MS-1]
          Length = 160

 Score = 38.3 bits (87), Expect = 0.36,   Method: Composition-based stats.
 Identities = 20/102 (19%), Positives = 30/102 (29%), Gaps = 6/102 (5%)

Query: 29  IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASG 88
           IA   T     G     R           S G     +   Q+         H      G
Sbjct: 59  IAPDGTVSTNLGIRGRLRIVTFANPQALQSEG---ANLFSSQAPARPAGPGQHL---EPG 112

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            ++  NV  +VE   + + NR Y      I +  D+  T + 
Sbjct: 113 ALERSNVKPVVEMTRLMDVNRTYAMVSSVISRLDDLRGTAIR 154


>gi|322378390|ref|ZP_08052845.1| flagellar basal-body rod protein (flgG) [Helicobacter suis HS1]
 gi|322380258|ref|ZP_08054478.1| flagellar basal-body rod protein (flgG) [Helicobacter suis HS5]
 gi|321147295|gb|EFX41975.1| flagellar basal-body rod protein (flgG) [Helicobacter suis HS5]
 gi|321149203|gb|EFX43648.1| flagellar basal-body rod protein (flgG) [Helicobacter suis HS1]
          Length = 286

 Score = 38.3 bits (87), Expect = 0.36,   Method: Composition-based stats.
 Identities = 13/62 (20%), Positives = 24/62 (38%), Gaps = 1/62 (1%)

Query: 70  QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS-HDMMTTT 128
               + E    +        ++  NVN ++E   + E NRL     + +K    DM T  
Sbjct: 219 PQEKMAERVELNAPIVRQHFLEKSNVNAVLEMTRLIEANRLVDMYSKVLKTHMDDMHTEA 278

Query: 129 LD 130
           ++
Sbjct: 279 IN 280


>gi|310816830|ref|YP_003964794.1| flagellar basal-body rod protein FlgF, putative [Ketogulonicigenium
           vulgare Y25]
 gi|308755565|gb|ADO43494.1| flagellar basal-body rod protein FlgF, putative [Ketogulonicigenium
           vulgare Y25]
          Length = 237

 Score = 38.3 bits (87), Expect = 0.37,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 22/56 (39%)

Query: 77  FDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
             P        G ++  NVN + + A M E  R Y        +  + + +T+ L+
Sbjct: 180 NMPYLEGQIRQGHLEGSNVNAIAQIARMIEVQRAYEFGQSLADREDERIRSTVQLM 235


>gi|23099962|ref|NP_693428.1| flagellar hook-associated protein FlgK [Oceanobacillus iheyensis
           HTE831]
 gi|22778193|dbj|BAC14463.1| flagellar hook-associated protein 1 [Oceanobacillus iheyensis
           HTE831]
          Length = 490

 Score = 38.3 bits (87), Expect = 0.37,   Method: Composition-based stats.
 Identities = 9/66 (13%), Positives = 27/66 (40%)

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
            +  +Q+  ++E          +  +    V++  E ++M +    Y A  + +    +M
Sbjct: 418 GVKSEQAYTMQENTMTLQHQVENQRLSISAVSLDEEMSNMIKFQHAYNAAARGMTTMDEM 477

Query: 125 MTTTLD 130
           + T ++
Sbjct: 478 IDTIIN 483


>gi|28900123|ref|NP_799778.1| putative flagellar basal-body rod protein [Vibrio parahaemolyticus
           RIMD 2210633]
 gi|153837106|ref|ZP_01989773.1| flagellar basal-body rod protein FlgF [Vibrio parahaemolyticus
           AQ3810]
 gi|260365773|ref|ZP_05778269.1| flagellar basal-body rod protein FlgF [Vibrio parahaemolyticus
           K5030]
 gi|260880695|ref|ZP_05893050.1| flagellar basal-body rod protein FlgF [Vibrio parahaemolyticus
           AN-5034]
 gi|260897699|ref|ZP_05906195.1| flagellar basal-body rod protein FlgF [Vibrio parahaemolyticus
           Peru-466]
 gi|260899390|ref|ZP_05907785.1| flagellar basal-body rod protein FlgF [Vibrio parahaemolyticus
           AQ4037]
 gi|28808406|dbj|BAC61611.1| putative flagellar basal-body rod protein [Vibrio parahaemolyticus
           RIMD 2210633]
 gi|149749694|gb|EDM60439.1| flagellar basal-body rod protein FlgF [Vibrio parahaemolyticus
           AQ3810]
 gi|308086220|gb|EFO35915.1| flagellar basal-body rod protein FlgF [Vibrio parahaemolyticus
           Peru-466]
 gi|308092603|gb|EFO42298.1| flagellar basal-body rod protein FlgF [Vibrio parahaemolyticus
           AN-5034]
 gi|308109250|gb|EFO46790.1| flagellar basal-body rod protein FlgF [Vibrio parahaemolyticus
           AQ4037]
 gi|308115048|gb|EFO52588.1| flagellar basal-body rod protein FlgF [Vibrio parahaemolyticus
           K5030]
          Length = 243

 Score = 38.3 bits (87), Expect = 0.37,   Method: Composition-based stats.
 Identities = 6/46 (13%), Positives = 18/46 (39%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
              ++  NV+ + E   +    R +   ++ +K +  +      L+
Sbjct: 195 PEHIEGSNVSAIDELIGVMSLTRNFEMQVRMMKTAETLAQAGNKLM 240


>gi|301631994|ref|XP_002945076.1| PREDICTED: flagellar basal-body rod protein flgB-like [Xenopus
           (Silurana) tropicalis]
          Length = 141

 Score = 38.3 bits (87), Expect = 0.37,   Method: Composition-based stats.
 Identities = 24/135 (17%), Positives = 47/135 (34%), Gaps = 9/135 (6%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRK--------TISFEE 53
           D L    +   + L +++ R ++I+ NIANA T G       +           T    +
Sbjct: 3   DKLTQQLNFHGNALMLRAERQRVIASNIANADTPGYVARDFRFADALRAATDDGTALVRQ 62

Query: 54  VMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
            +   G      I +  +   E+             +    V++  E A+  +    Y A
Sbjct: 63  RLGTDGTRHAGHIRLPAARTGEQPGTLGYAVQTQPNLDRNTVDMDRERANFVDNAVHYEA 122

Query: 114 NLQTIK-QSHDMMTT 127
            L+ I   +  M++ 
Sbjct: 123 TLRFINGNAKTMLSA 137


>gi|91204384|emb|CAJ70884.1| strongly similar to flagellar hook protein [Candidatus Kuenenia
           stuttgartiensis]
          Length = 250

 Score = 38.3 bits (87), Expect = 0.37,   Method: Composition-based stats.
 Identities = 15/95 (15%), Positives = 32/95 (33%)

Query: 37  DTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVN 96
            +   D      ++    ++  G   +       S           V  A G ++  NVN
Sbjct: 154 GSVSVDGKTISKLNIVNFLNPDGLTSIGGSAYVASDKANPTTADGTVEIAQGYLEKSNVN 213

Query: 97  VLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           V+ E  +M    R + +  ++    +D +   + L
Sbjct: 214 VIDEMVNMIANMRSFQSGNKSTDSINDSLKKLIGL 248


>gi|326389602|ref|ZP_08211168.1| flagellar hook-associated protein FlgK [Thermoanaerobacter
           ethanolicus JW 200]
 gi|325994317|gb|EGD52743.1| flagellar hook-associated protein FlgK [Thermoanaerobacter
           ethanolicus JW 200]
          Length = 482

 Score = 38.3 bits (87), Expect = 0.38,   Method: Composition-based stats.
 Identities = 7/38 (18%), Positives = 20/38 (52%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             V++  E  +M +  + Y+A+ + I    +++ T ++
Sbjct: 438 SGVSLDEEMTNMLKYQKSYVASARVITVMDELLDTLIN 475



 Score = 36.0 bits (81), Expect = 1.5,   Method: Composition-based stats.
 Identities = 14/87 (16%), Positives = 27/87 (31%), Gaps = 1/87 (1%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDP-YRRKTISFEEVMHGSGGVRV 63
               IA +GL V    + +   NIANA T G T            +   +    G    
Sbjct: 4  FQGLEIAKTGLFVSQKALDVTGHNIANANTPGYTRQVVDMASIAPPTTFGMYDQWGKAIG 63

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIV 90
          + + +     + +    +     +  +
Sbjct: 64 EGVKIQDIRQIRDQFLDNQFRRENKFL 90


>gi|238755323|ref|ZP_04616666.1| Flagellar basal-body rod protein flgF [Yersinia ruckeri ATCC 29473]
 gi|238706459|gb|EEP98833.1| Flagellar basal-body rod protein flgF [Yersinia ruckeri ATCC 29473]
          Length = 251

 Score = 38.3 bits (87), Expect = 0.38,   Method: Composition-based stats.
 Identities = 9/47 (19%), Positives = 17/47 (36%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
             G+++  NV  +    DM    R +   ++ I    +       LL
Sbjct: 202 MPGVLEGSNVKPVETMVDMIANARRFEMQMKVIHSVDENEQRANQLL 248


>gi|221635454|ref|YP_002523330.1| flagellar hook-associated protein FlgK [Thermomicrobium roseum DSM
           5159]
 gi|221158038|gb|ACM07156.1| flagellar hook-associated protein FlgK [Thermomicrobium roseum DSM
           5159]
          Length = 468

 Score = 38.3 bits (87), Expect = 0.38,   Method: Composition-based stats.
 Identities = 7/36 (19%), Positives = 18/36 (50%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           V++  E A++ +  + Y A  + I    +M+   ++
Sbjct: 426 VSLDEEMANLIKYQQAYGAAARAITAVDEMLDRIIN 461



 Score = 33.7 bits (75), Expect = 8.5,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 17/55 (30%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
            +   A  GL  Q   +   + NIANA T G                   + SG
Sbjct: 3  FRALETAFRGLMAQQRVVDTANHNIANANTPGFARQRVSLVPSMPYTVPAFNRSG 57


>gi|66768556|ref|YP_243318.1| flagellar hook-associated protein FlgK [Xanthomonas campestris
          pv. campestris str. 8004]
 gi|66573888|gb|AAY49298.1| flagellar protein [Xanthomonas campestris pv. campestris str.
          8004]
          Length = 624

 Score = 38.3 bits (87), Expect = 0.38,   Method: Composition-based stats.
 Identities = 11/64 (17%), Positives = 23/64 (35%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          ++      S L      +  +S N+AN  T G +     +  +T +         G ++ 
Sbjct: 1  MSIMSTGTSALIAFQRALSTVSHNVANINTEGYSRQRVEFATRTPTDMGYAFVGNGAKIS 60

Query: 65 KIGV 68
           +G 
Sbjct: 61 DVGR 64


>gi|66046705|ref|YP_236546.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv.
           syringae B728a]
 gi|63257412|gb|AAY38508.1| Flagellar basal body rod protein:Protein of unknown function
           DUF1078 [Pseudomonas syringae pv. syringae B728a]
 gi|330899405|gb|EGH30824.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv.
           japonica str. M301072PT]
 gi|330972415|gb|EGH72481.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv.
           aceris str. M302273PT]
 gi|330975978|gb|EGH76044.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv.
           aptata str. DSM 50252]
          Length = 246

 Score = 38.3 bits (87), Expect = 0.38,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 23/56 (41%), Gaps = 3/56 (5%)

Query: 80  GHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS---HDMMTTTLDLL 132
              V   SG ++  NVN + E   +   +R +  +++ +K +      M   L L 
Sbjct: 191 DATVQVESGFLQASNVNAVEEMTSVLALSRQFELHVKMMKTAEEDDQSMARVLQLG 246


>gi|254475034|ref|ZP_05088420.1| flagellar hook-associated protein FlgK [Ruegeria sp. R11]
 gi|214029277|gb|EEB70112.1| flagellar hook-associated protein FlgK [Ruegeria sp. R11]
          Length = 482

 Score = 38.3 bits (87), Expect = 0.38,   Method: Composition-based stats.
 Identities = 21/101 (20%), Positives = 38/101 (37%), Gaps = 7/101 (6%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             + ++ + A SGL     +  ++SEN+AN  T G       Y R++++      G  GV
Sbjct: 1   MTITSALNSAMSGLTAAGRQTSVVSENLANVLTPG-------YSRRSVALTSAGDGFAGV 53

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETA 102
           RV  +       ++              V+      +VE  
Sbjct: 54  RVNGVQRFNDPGLQASVRTANTELGVSKVQSDFYGRMVELV 94



 Score = 37.2 bits (84), Expect = 0.79,   Method: Composition-based stats.
 Identities = 9/40 (22%), Positives = 18/40 (45%)

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
              V+   E  ++    ++Y AN + I    ++M T L +
Sbjct: 443 AQGVDSDAELQNLIVIEKVYQANARMISVVDELMETLLRI 482


>gi|163794151|ref|ZP_02188124.1| hypothetical protein BAL199_02019 [alpha proteobacterium BAL199]
 gi|159180765|gb|EDP65284.1| hypothetical protein BAL199_02019 [alpha proteobacterium BAL199]
          Length = 240

 Score = 38.3 bits (87), Expect = 0.38,   Method: Composition-based stats.
 Identities = 12/67 (17%), Positives = 25/67 (37%)

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
           +K+        +  +P        G+++  NVN + E   M + +R Y A    + +   
Sbjct: 167 QKVRDSLFETDQVPEPAQESEVMQGMIETSNVNAITEMTSMIDVHRAYEAAKTLLDREDK 226

Query: 124 MMTTTLD 130
              T + 
Sbjct: 227 RQDTIIQ 233


>gi|163803170|ref|ZP_02197053.1| putative flagellar basal-body rod protein [Vibrio sp. AND4]
 gi|159173070|gb|EDP57903.1| putative flagellar basal-body rod protein [Vibrio sp. AND4]
          Length = 243

 Score = 38.3 bits (87), Expect = 0.38,   Method: Composition-based stats.
 Identities = 8/56 (14%), Positives = 21/56 (37%)

Query: 77  FDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           F     V  +   ++  NV+ + E   +    R +   ++ +K +  +      L+
Sbjct: 185 FPADETVQLSPEHIEGSNVSAIDELLSVMSLTRNFEMQVRMMKTAETLAQAGNKLM 240


>gi|296330251|ref|ZP_06872732.1| flagellar hook-associated protein FlgK [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305676144|ref|YP_003867816.1| flagellar hook-filament junction [Bacillus subtilis subsp.
           spizizenii str. W23]
 gi|296152519|gb|EFG93387.1| flagellar hook-associated protein FlgK [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305414388|gb|ADM39507.1| flagellar hook-filament junction [Bacillus subtilis subsp.
           spizizenii str. W23]
          Length = 507

 Score = 38.3 bits (87), Expect = 0.38,   Method: Composition-based stats.
 Identities = 12/101 (11%), Positives = 30/101 (29%), Gaps = 1/101 (0%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGI- 89
           NA  T                  V+    G+  +     Q       +    + +A    
Sbjct: 400 NANATKLANVLTGKITINGKETSVLDYYAGLIGELGIKAQEANRLASNTETQLNDADINR 459

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            +   V++  E  +M +    Y A  + +    +++   ++
Sbjct: 460 QQMSAVSLDEEMTNMIQFQHAYNAAARMVTLQDEILDKVIN 500



 Score = 38.3 bits (87), Expect = 0.40,   Method: Composition-based stats.
 Identities = 20/95 (21%), Positives = 31/95 (32%), Gaps = 5/95 (5%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTP-----GSDPYRRKTISFEEVM 55
          M         A   L+ Q A +   + N+ANA T G T       +  Y        E  
Sbjct: 1  MTSTFMGLETARRALSAQQAALSTTANNVANANTDGYTRQRVSLEATDYFPAVSKNAEKT 60

Query: 56 HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           G  G  V+   V++   +          N++G  
Sbjct: 61 AGQMGTGVQGKSVERIRDIFLDYQYRLQNNSAGYY 95


>gi|163783988|ref|ZP_02178953.1| flagellar hook protein FlgE [Hydrogenivirga sp. 128-5-R1-1]
 gi|159880748|gb|EDP74287.1| flagellar hook protein FlgE [Hydrogenivirga sp. 128-5-R1-1]
          Length = 327

 Score = 38.3 bits (87), Expect = 0.38,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 20/41 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +I S +  N+GL      + +IS+NIAN  T G       +
Sbjct: 1  MIQSFYTGNAGLNANQKWLSVISDNIANVNTIGFKAERANF 41


>gi|302878277|ref|YP_003846841.1| flagellar basal-body rod protein FlgF [Gallionella
           capsiferriformans ES-2]
 gi|302581066|gb|ADL55077.1| flagellar basal-body rod protein FlgF [Gallionella
           capsiferriformans ES-2]
          Length = 247

 Score = 38.3 bits (87), Expect = 0.39,   Method: Composition-based stats.
 Identities = 17/145 (11%), Positives = 45/145 (31%), Gaps = 22/145 (15%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
            S  I++SG+      + ++S+    +      PG+     K  +   V  G+    V  
Sbjct: 103 GSFQISSSGVLQTRNGLNVLSD----SGPITIPPGTQLTFAKDGTISTVPEGNQATSVVV 158

Query: 66  IGVDQSTFVEEFDPGHPVANA------------------SGIVKYPNVNVLVETADMRET 107
           +G  +    +                              G ++  NV+ +    +M   
Sbjct: 159 VGRLKLVNPDVAKLERSGDGMFRMKDGSTAPADAKTEIAPGNLEGSNVSTVEMMVNMISL 218

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLL 132
            R +   ++ ++ + +       ++
Sbjct: 219 ARKFDMQMKMLQTADNNAKQASSIM 243


>gi|212639570|ref|YP_002316090.1| flagellar basal body rod protein FlgB [Anoxybacillus flavithermus
           WK1]
 gi|212561050|gb|ACJ34105.1| Flagellar basal body rod protein FlgB [Anoxybacillus flavithermus
           WK1]
          Length = 126

 Score = 38.3 bits (87), Expect = 0.39,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 41/119 (34%), Gaps = 7/119 (5%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M     +  I   GL   S + ++I+ NIAN  T       D   R         + +  
Sbjct: 1   MKLFSNTFQILEQGLNYSSLKQKVIANNIANVDTPNFK-AKDVQFRTEFHQALQAYRTDP 59

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
              +  G     FV   +      N +      NV++  E +D+ +    Y A ++ + 
Sbjct: 60  RHFEFKGGTSKFFVTTKNDLVYNHNNN------NVDLDKEMSDLAQNQIYYNALVERLN 112


>gi|21231391|ref|NP_637308.1| flagellar hook-associated protein FlgK [Xanthomonas campestris
          pv. campestris str. ATCC 33913]
 gi|188991635|ref|YP_001903645.1| flagellar hook-associated protein FlgK [Xanthomonas campestris
          pv. campestris str. B100]
 gi|21113056|gb|AAM41232.1| flagellar protein [Xanthomonas campestris pv. campestris str.
          ATCC 33913]
 gi|167733395|emb|CAP51596.1| Flagellar hook-associated protein 1 (HAP1) [Xanthomonas
          campestris pv. campestris]
          Length = 624

 Score = 38.3 bits (87), Expect = 0.39,   Method: Composition-based stats.
 Identities = 11/64 (17%), Positives = 23/64 (35%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          ++      S L      +  +S N+AN  T G +     +  +T +         G ++ 
Sbjct: 1  MSIMSTGTSALIAFQRALSTVSHNVANINTEGYSRQRVEFATRTPTDMGYAFVGNGAKIS 60

Query: 65 KIGV 68
           +G 
Sbjct: 61 DVGR 64


>gi|39934722|ref|NP_946998.1| flagellar basal-body rod protein FlgG [Rhodopseudomonas palustris
           CGA009]
 gi|39648572|emb|CAE27093.1| possible flagellar basal-body rod protein FlgG [Rhodopseudomonas
           palustris CGA009]
          Length = 273

 Score = 38.3 bits (87), Expect = 0.39,   Method: Composition-based stats.
 Identities = 10/51 (19%), Positives = 22/51 (43%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +        ++  NV++  +   M +  + Y A  + +  S++MM T   L
Sbjct: 221 NAGTVVGSALEASNVDIADQMTTMVQAQQAYSACTRVVIASNEMMLTMTSL 271



 Score = 34.5 bits (77), Expect = 5.3,   Method: Composition-based stats.
 Identities = 14/40 (35%), Positives = 22/40 (55%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          + +   A +GL  QSA  + IS N+ANA+TT     +  +
Sbjct: 4  LGALWTATTGLQAQSAAFENISGNVANAQTTAFKATNTAF 43


>gi|121596114|ref|YP_988010.1| flagellar basal-body rod protein FlgB [Acidovorax sp. JS42]
 gi|120608194|gb|ABM43934.1| flagellar basal-body rod protein FlgB [Acidovorax sp. JS42]
          Length = 151

 Score = 38.3 bits (87), Expect = 0.39,   Method: Composition-based stats.
 Identities = 26/139 (18%), Positives = 44/139 (31%), Gaps = 15/139 (10%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
           D +        S L ++S R + I+ NIANA T G     D      +           +
Sbjct: 16  DKMTNRLDFHGSALLLRSERQRAIASNIANADTPGY-VARDFKFADAMRAVNEAQAPSPL 74

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYP----------NVNVLVETADMRETNRLY 111
           R + +    S       P     ++   + Y            V++  E A   +    Y
Sbjct: 75  RSQSV----SDPRHIPLPAAASGSSDSTLGYALQTQPSLDNNTVDMDRERAAFVDNAVRY 130

Query: 112 MANLQTIKQSHDMMTTTLD 130
            A L+ I      M + + 
Sbjct: 131 EATLRFINGQSKTMLSAIQ 149


>gi|251789169|ref|YP_003003890.1| flagellar basal body rod protein [Dickeya zeae Ech1591]
 gi|247537790|gb|ACT06411.1| flagellar basal body rod protein [Dickeya zeae Ech1591]
          Length = 251

 Score = 38.3 bits (87), Expect = 0.39,   Method: Composition-based stats.
 Identities = 14/105 (13%), Positives = 29/105 (27%)

Query: 28  NIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANAS 87
           N  N     +T       +   +    +        +     Q            V    
Sbjct: 144 NALNPSDAANTVTQIGRLKLVKATANEVTRGDDGFFRVSPAAQQQRGAVLQNDATVRVMP 203

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           G+++  NVN +    +M   +R +   ++ I    D       +L
Sbjct: 204 GVLEGSNVNTVESMVEMISNSRRFEMQMKVISNVDDNTQRANQIL 248


>gi|183598623|ref|ZP_02960116.1| hypothetical protein PROSTU_02024 [Providencia stuartii ATCC 25827]
 gi|188020803|gb|EDU58843.1| hypothetical protein PROSTU_02024 [Providencia stuartii ATCC 25827]
          Length = 559

 Score = 38.3 bits (87), Expect = 0.39,   Method: Composition-based stats.
 Identities = 14/101 (13%), Positives = 30/101 (29%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           L    + A SG+      + +IS N+ANA        S  +     +     +   G   
Sbjct: 15  LNNVMNNALSGVNAAQGGLSVISNNLANAGVGYYHRQSAVFGENPGTMTPNGYFGNGTYF 74

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
             +  +   F+ +        +        N + + +    
Sbjct: 75  SHVRREFDEFINQQYGQSRARSGEYEAYAKNSSQVDDLLTN 115


>gi|192292820|ref|YP_001993425.1| flagellar hook-associated protein FlgK [Rhodopseudomonas palustris
           TIE-1]
 gi|192286569|gb|ACF02950.1| flagellar hook-associated protein FlgK [Rhodopseudomonas palustris
           TIE-1]
          Length = 623

 Score = 38.3 bits (87), Expect = 0.39,   Method: Composition-based stats.
 Identities = 8/45 (17%), Positives = 15/45 (33%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
                    VN+  E A +      Y AN + +   + M  + + 
Sbjct: 577 QQKFSTSSGVNMDEEMAHLLSLQNAYAANARVMSTINQMYQSLMQ 621



 Score = 34.5 bits (77), Expect = 5.3,   Method: Composition-based stats.
 Identities = 27/68 (39%), Positives = 35/68 (51%), Gaps = 7/68 (10%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            L  +  IA +GL V  A M ++S N+ANA T G       Y RKT++   V  G  G 
Sbjct: 1  MSLGDALAIAMAGLRVNQATMSLVSSNVANAETPG-------YVRKTVNQSAVNAGETGT 53

Query: 62 RVKKIGVD 69
           VK +GVD
Sbjct: 54 SVKVVGVD 61


>gi|22127321|ref|NP_670744.1| flagellar hook-associated protein FlgK [Yersinia pestis KIM 10]
 gi|45442802|ref|NP_994341.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar
           Microtus str. 91001]
 gi|108809049|ref|YP_652965.1| flagellar hook-associated protein FlgK [Yersinia pestis Antiqua]
 gi|108810754|ref|YP_646521.1| flagellar hook-associated protein FlgK [Yersinia pestis Nepal516]
 gi|145597823|ref|YP_001161899.1| flagellar hook-associated protein FlgK [Yersinia pestis Pestoides
           F]
 gi|150260243|ref|ZP_01916971.1| lateral flagellar hook-associated protein 1 [Yersinia pestis
           CA88-4125]
 gi|162420194|ref|YP_001604841.1| flagellar hook-associated protein FlgK [Yersinia pestis Angola]
 gi|165925087|ref|ZP_02220919.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165939060|ref|ZP_02227612.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|166008985|ref|ZP_02229883.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166212172|ref|ZP_02238207.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|167399689|ref|ZP_02305213.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167419324|ref|ZP_02311077.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167425178|ref|ZP_02316931.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|167466331|ref|ZP_02331035.1| flagellar hook-associated protein FlgK [Yersinia pestis FV-1]
 gi|218927918|ref|YP_002345793.1| flagellar hook-associated protein FlgK [Yersinia pestis CO92]
 gi|229837414|ref|ZP_04457577.1| Flagellar hook-associated protein flgK [Yersinia pestis Pestoides
           A]
 gi|229840629|ref|ZP_04460788.1| Flagellar hook-associated protein flgK [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229842820|ref|ZP_04462972.1| Flagellar hook-associated protein flgK [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229900951|ref|ZP_04516075.1| Flagellar hook-associated protein flgK [Yersinia pestis Nepal516]
 gi|270487666|ref|ZP_06204740.1| flagellar hook-associated protein FlgK [Yersinia pestis KIM D27]
 gi|294502794|ref|YP_003566856.1| flagellar hook-associated protein [Yersinia pestis Z176003]
 gi|21960402|gb|AAM86995.1|AE013948_3 putative flagellar hook-associated protein [Yersinia pestis KIM 10]
 gi|45437668|gb|AAS63218.1| putative flagellar hook-associated protein [Yersinia pestis biovar
           Microtus str. 91001]
 gi|108774402|gb|ABG16921.1| flagellar hook-associated protein [Yersinia pestis Nepal516]
 gi|108780962|gb|ABG15020.1| putative flagellar hook-associated protein [Yersinia pestis
           Antiqua]
 gi|115346529|emb|CAL19406.1| putative flagellar hook-associated protein [Yersinia pestis CO92]
 gi|145209519|gb|ABP38926.1| flagellar hook-associated protein [Yersinia pestis Pestoides F]
 gi|149289651|gb|EDM39728.1| lateral flagellar hook-associated protein 1 [Yersinia pestis
           CA88-4125]
 gi|162353009|gb|ABX86957.1| flagellar hook-associated protein FlgK [Yersinia pestis Angola]
 gi|165913016|gb|EDR31641.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|165923287|gb|EDR40438.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165992324|gb|EDR44625.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166206918|gb|EDR51398.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|166963318|gb|EDR59339.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167052193|gb|EDR63601.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167055941|gb|EDR65722.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|229682290|gb|EEO78382.1| Flagellar hook-associated protein flgK [Yersinia pestis Nepal516]
 gi|229690087|gb|EEO82144.1| Flagellar hook-associated protein flgK [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229696995|gb|EEO87042.1| Flagellar hook-associated protein flgK [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229705537|gb|EEO91547.1| Flagellar hook-associated protein flgK [Yersinia pestis Pestoides
           A]
 gi|262360826|gb|ACY57547.1| flagellar hook-associated protein [Yersinia pestis D106004]
 gi|262364771|gb|ACY61328.1| flagellar hook-associated protein [Yersinia pestis D182038]
 gi|270336170|gb|EFA46947.1| flagellar hook-associated protein FlgK [Yersinia pestis KIM D27]
 gi|294353253|gb|ADE63594.1| flagellar hook-associated protein [Yersinia pestis Z176003]
 gi|320016705|gb|ADW00277.1| Flagellar hook-associated protein flgK [Yersinia pestis biovar
           Medievalis str. Harbin 35]
          Length = 453

 Score = 38.3 bits (87), Expect = 0.39,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 17/39 (43%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN   E  ++ E  R Y +N++ I     + +  L L
Sbjct: 414 SGVNNDEEAMNLMEYQRAYQSNMKVIATGDKLFSDLLAL 452



 Score = 35.6 bits (80), Expect = 2.3,   Method: Composition-based stats.
 Identities = 18/104 (17%), Positives = 30/104 (28%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           +     A SG+    A +   S NIAN  T G +             +  ++   GV V 
Sbjct: 1   MNFIRTAFSGMQATQAHLNATSMNIANMHTPGYSRQRAEQSAIGADGQGGVNAGNGVNVD 60

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            I      +V   +                +N +        T+
Sbjct: 61  GIRRLSQQYVVMQEWRANSQQQYYDAGEQYLNAVELMVSNESTS 104


>gi|226327737|ref|ZP_03803255.1| hypothetical protein PROPEN_01610 [Proteus penneri ATCC 35198]
 gi|225203441|gb|EEG85795.1| hypothetical protein PROPEN_01610 [Proteus penneri ATCC 35198]
          Length = 463

 Score = 38.3 bits (87), Expect = 0.40,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 25/66 (37%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
           + A SGL    A M  +S NIAN            +   + +     +   GV V +I 
Sbjct: 6  INTAMSGLNAAQAAMSTVSNNIANQNVKWYNRQMTVFNENSGTMTGNGYIGNGVNVSRIH 65

Query: 68 VDQSTF 73
           + + F
Sbjct: 66 REYNEF 71


>gi|39936992|ref|NP_949268.1| flagellar hook-associated protein [Rhodopseudomonas palustris
           CGA009]
 gi|39650849|emb|CAE29372.1| possible flagellar hook-associated protein 1 FlgK [Rhodopseudomonas
           palustris CGA009]
          Length = 623

 Score = 38.3 bits (87), Expect = 0.40,   Method: Composition-based stats.
 Identities = 8/45 (17%), Positives = 15/45 (33%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
                    VN+  E A +      Y AN + +   + M  + + 
Sbjct: 577 QQKFSTSSGVNMDEEMAHLLSLQNAYAANARVMSTINQMYQSLMQ 621



 Score = 34.5 bits (77), Expect = 5.3,   Method: Composition-based stats.
 Identities = 27/68 (39%), Positives = 35/68 (51%), Gaps = 7/68 (10%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            L  +  IA +GL V  A M ++S N+ANA T G       Y RKT++   V  G  G 
Sbjct: 1  MSLGDALAIAMAGLRVNQATMSLVSSNVANAETPG-------YVRKTVNQSAVNAGETGT 53

Query: 62 RVKKIGVD 69
           VK +GVD
Sbjct: 54 SVKVVGVD 61


>gi|116694220|ref|YP_728431.1| flagellar basal body rod protein FlgF [Ralstonia eutropha H16]
 gi|113528719|emb|CAJ95066.1| flagellar basal body rod protein [Ralstonia eutropha H16]
          Length = 247

 Score = 38.3 bits (87), Expect = 0.40,   Method: Composition-based stats.
 Identities = 11/62 (17%), Positives = 21/62 (33%)

Query: 71  STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
               +  +    V   SG ++  NVN      +M    R +   ++ I+ +         
Sbjct: 183 RPGAQPLEADPTVRVISGALEGSNVNPTEAMVEMIANARRFEMQMKMIQGADGNEQRANQ 242

Query: 131 LL 132
           LL
Sbjct: 243 LL 244


>gi|76808961|ref|YP_331880.1| flagellar basal body rod protein FlgF [Burkholderia pseudomallei
           1710b]
 gi|126452329|ref|YP_001064565.1| flagellar basal body rod protein FlgF [Burkholderia pseudomallei
           1106a]
 gi|167736704|ref|ZP_02409478.1| flagellar basal body rod protein FlgF [Burkholderia pseudomallei
           14]
 gi|167822319|ref|ZP_02453790.1| flagellar basal body rod protein FlgF [Burkholderia pseudomallei 9]
 gi|167909128|ref|ZP_02496219.1| flagellar basal body rod protein FlgF [Burkholderia pseudomallei
           112]
 gi|226199728|ref|ZP_03795279.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei
           Pakistan 9]
 gi|242314788|ref|ZP_04813804.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei
           1106b]
 gi|254196477|ref|ZP_04902901.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei
           S13]
 gi|254260132|ref|ZP_04951186.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei
           1710a]
 gi|254295815|ref|ZP_04963272.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei
           406e]
 gi|14091669|gb|AAK53815.1|AF370881_1 flagellar basal-body rod protein [Burkholderia pseudomallei]
 gi|76578414|gb|ABA47889.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei
           1710b]
 gi|126225971|gb|ABN89511.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei
           1106a]
 gi|157805973|gb|EDO83143.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei
           406e]
 gi|169653220|gb|EDS85913.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei
           S13]
 gi|225928079|gb|EEH24115.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei
           Pakistan 9]
 gi|242138027|gb|EES24429.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei
           1106b]
 gi|254218821|gb|EET08205.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei
           1710a]
          Length = 253

 Score = 38.3 bits (87), Expect = 0.40,   Method: Composition-based stats.
 Identities = 8/46 (17%), Positives = 16/46 (34%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
              ++  NVN +     M +  R +    + I+ +         LL
Sbjct: 205 PNSLEGSNVNPVAAMVSMIDNARAFELQTKLIQSADQNEQAANQLL 250


>gi|260431749|ref|ZP_05785720.1| flagellar basal-body rod protein FlgF [Silicibacter
           lacuscaerulensis ITI-1157]
 gi|260415577|gb|EEX08836.1| flagellar basal-body rod protein FlgF [Silicibacter
           lacuscaerulensis ITI-1157]
          Length = 236

 Score = 38.3 bits (87), Expect = 0.40,   Method: Composition-based stats.
 Identities = 11/62 (17%), Positives = 22/62 (35%), Gaps = 1/62 (1%)

Query: 73  FVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL-DL 131
              E +P          ++  NVN + +   + E  R Y      ++   + +   L  L
Sbjct: 175 PDGEVEPVEQPVVLHRFLEGSNVNAIDQVTKLIEIQRAYELGQSFLEAEDERIRGALKTL 234

Query: 132 LR 133
           +R
Sbjct: 235 MR 236


>gi|68164563|gb|AAY87292.1| predicted flagellar basal-body rod protein [uncultured bacterium
           BAC17H8]
          Length = 259

 Score = 38.3 bits (87), Expect = 0.40,   Method: Composition-based stats.
 Identities = 11/96 (11%), Positives = 29/96 (30%)

Query: 34  TTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
             G+   +        +    +   GG   K         +      +      G ++  
Sbjct: 163 GDGEMVDAGTLALAHFANSGGLKPVGGSYFKATEKSGPAILGSPTQQNFGEIVQGHLEMS 222

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
           N NV  E   +  + + + A+ + ++ + +     L
Sbjct: 223 NTNVANELTKLMVSQQAFSASSRLMQSAIESEKRLL 258


>gi|315637965|ref|ZP_07893151.1| flagellar basal-body rod protein [Campylobacter upsaliensis JV21]
 gi|315482000|gb|EFU72618.1| flagellar basal-body rod protein [Campylobacter upsaliensis JV21]
          Length = 270

 Score = 37.9 bits (86), Expect = 0.41,   Method: Composition-based stats.
 Identities = 9/50 (18%), Positives = 19/50 (38%), Gaps = 1/50 (2%)

Query: 82  PVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS-HDMMTTTLD 130
             +   G  +  NVN + E   + E NR+     + +     D+    ++
Sbjct: 215 SNSVKQGFSQGSNVNPVSEMVGLIEANRMVEMYQKVMTAHMDDLNQDAIN 264


>gi|238788316|ref|ZP_04632110.1| Flagellar basal-body rod protein flgF [Yersinia frederiksenii ATCC
           33641]
 gi|238723562|gb|EEQ15208.1| Flagellar basal-body rod protein flgF [Yersinia frederiksenii ATCC
           33641]
          Length = 251

 Score = 37.9 bits (86), Expect = 0.41,   Method: Composition-based stats.
 Identities = 9/47 (19%), Positives = 17/47 (36%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
             G+++  NV  +    DM    R +   ++ I    +       LL
Sbjct: 202 MPGVLEGSNVKAVEAMTDMIANARSFEMQMKVIHSVDENEQRANQLL 248


>gi|146278638|ref|YP_001168797.1| flagellar basal body rod protein FlgF [Rhodobacter sphaeroides ATCC
           17025]
 gi|145556879|gb|ABP71492.1| Flagellar hook protein FlgE-like protein [Rhodobacter sphaeroides
           ATCC 17025]
          Length = 239

 Score = 37.9 bits (86), Expect = 0.41,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 23/55 (41%)

Query: 78  DPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +P    +   G ++  NV  + E + M E  R Y      + +  D +  T+ +L
Sbjct: 181 EPAAGASLIQGSLEESNVAPISEISRMIEVQRAYELGQGFLDREDDRIRNTVRIL 235


>gi|148546708|ref|YP_001266810.1| flagellar basal body rod protein FlgF [Pseudomonas putida F1]
 gi|148510766|gb|ABQ77626.1| flagellar basal-body rod protein FlgF [Pseudomonas putida F1]
          Length = 246

 Score = 37.9 bits (86), Expect = 0.41,   Method: Composition-based stats.
 Identities = 10/49 (20%), Positives = 22/49 (44%), Gaps = 3/49 (6%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS---HDMMTTTLDLL 132
           SG ++  NVN + E   +   +R +  +++ +  +    + M   L L 
Sbjct: 198 SGFLQGSNVNAVEEMTSVLALSRQFELHVKMMNAAKEGDEAMARVLQLG 246


>gi|319944129|ref|ZP_08018407.1| flagellar hook-associated protein [Lautropia mirabilis ATCC 51599]
 gi|319742623|gb|EFV95032.1| flagellar hook-associated protein [Lautropia mirabilis ATCC 51599]
          Length = 628

 Score = 37.9 bits (86), Expect = 0.41,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 20/41 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             VN+  E A + +  + Y A  + I+ + +M  + L L R
Sbjct: 588 SGVNLDEEAARLLQYRQAYQAAAKVIQTADEMFNSILALAR 628


>gi|167579489|ref|ZP_02372363.1| flagellar basal body rod protein FlgF [Burkholderia thailandensis
           TXDOH]
          Length = 253

 Score = 37.9 bits (86), Expect = 0.41,   Method: Composition-based stats.
 Identities = 8/46 (17%), Positives = 16/46 (34%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
              ++  NVN +     M +  R +    + I+ +         LL
Sbjct: 205 PNSLEGSNVNPVAAMVSMIDNARAFELQTKLIQSADQNEQAANQLL 250


>gi|167568108|ref|ZP_02361024.1| flagellar basal body rod protein FlgF [Burkholderia oklahomensis
           EO147]
 gi|167574226|ref|ZP_02367100.1| flagellar basal body rod protein FlgF [Burkholderia oklahomensis
           C6786]
          Length = 253

 Score = 37.9 bits (86), Expect = 0.41,   Method: Composition-based stats.
 Identities = 8/46 (17%), Positives = 16/46 (34%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
              ++  NVN +     M +  R +    + I+ +         LL
Sbjct: 205 PNSLEGSNVNPVAAMVSMIDNARAFELQTKLIQSADQNEQAANQLL 250


>gi|53717915|ref|YP_106901.1| flagellar basal body rod protein FlgF [Burkholderia pseudomallei
           K96243]
 gi|53724566|ref|YP_104799.1| flagellar basal body rod protein FlgF [Burkholderia mallei ATCC
           23344]
 gi|67641539|ref|ZP_00440316.1| flagellar basal-body rod protein FlgF [Burkholderia mallei GB8
           horse 4]
 gi|121600078|ref|YP_994292.1| flagellar basal body rod protein FlgF [Burkholderia mallei SAVP1]
 gi|124385734|ref|YP_001028059.1| flagellar basal body rod protein FlgF [Burkholderia mallei NCTC
           10229]
 gi|126438677|ref|YP_001057323.1| flagellar basal body rod protein FlgF [Burkholderia pseudomallei
           668]
 gi|126449756|ref|YP_001082866.1| flagellar basal body rod protein FlgF [Burkholderia mallei NCTC
           10247]
 gi|134283591|ref|ZP_01770290.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei
           305]
 gi|167001538|ref|ZP_02267333.1| flagellar basal-body rod protein FlgF [Burkholderia mallei PRL-20]
 gi|167717661|ref|ZP_02400897.1| flagellar basal body rod protein FlgF [Burkholderia pseudomallei
           DM98]
 gi|167813803|ref|ZP_02445483.1| flagellar basal body rod protein FlgF [Burkholderia pseudomallei
           91]
 gi|167843909|ref|ZP_02469417.1| flagellar basal body rod protein FlgF [Burkholderia pseudomallei
           B7210]
 gi|167892411|ref|ZP_02479813.1| flagellar basal body rod protein FlgF [Burkholderia pseudomallei
           7894]
 gi|167900909|ref|ZP_02488114.1| flagellar basal body rod protein FlgF [Burkholderia pseudomallei
           NCTC 13177]
 gi|167917165|ref|ZP_02504256.1| flagellar basal body rod protein FlgF [Burkholderia pseudomallei
           BCC215]
 gi|217425035|ref|ZP_03456531.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei
           576]
 gi|237810462|ref|YP_002894913.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei
           MSHR346]
 gi|254174652|ref|ZP_04881313.1| flagellar basal-body rod protein FlgF [Burkholderia mallei ATCC
           10399]
 gi|254182139|ref|ZP_04888736.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei
           1655]
 gi|254188069|ref|ZP_04894581.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei
           Pasteur 52237]
 gi|254201897|ref|ZP_04908261.1| flagellar basal-body rod protein FlgF [Burkholderia mallei FMH]
 gi|254207231|ref|ZP_04913582.1| flagellar basal-body rod protein FlgF [Burkholderia mallei JHU]
 gi|254359733|ref|ZP_04976004.1| flagellar basal-body rod protein FlgF [Burkholderia mallei
           2002721280]
 gi|52208329|emb|CAH34262.1| flagellar basal-body rod protein [Burkholderia pseudomallei K96243]
 gi|52427989|gb|AAU48582.1| flagellar basal-body rod protein FlgF [Burkholderia mallei ATCC
           23344]
 gi|121228888|gb|ABM51406.1| flagellar basal-body rod protein FlgF [Burkholderia mallei SAVP1]
 gi|124293754|gb|ABN03023.1| flagellar basal-body rod protein FlgF [Burkholderia mallei NCTC
           10229]
 gi|126218170|gb|ABN81676.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei
           668]
 gi|126242626|gb|ABO05719.1| flagellar basal-body rod protein FlgF [Burkholderia mallei NCTC
           10247]
 gi|134245000|gb|EBA45095.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei
           305]
 gi|147747791|gb|EDK54867.1| flagellar basal-body rod protein FlgF [Burkholderia mallei FMH]
 gi|147752773|gb|EDK59839.1| flagellar basal-body rod protein FlgF [Burkholderia mallei JHU]
 gi|148028947|gb|EDK86879.1| flagellar basal-body rod protein FlgF [Burkholderia mallei
           2002721280]
 gi|157935749|gb|EDO91419.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei
           Pasteur 52237]
 gi|160695697|gb|EDP85667.1| flagellar basal-body rod protein FlgF [Burkholderia mallei ATCC
           10399]
 gi|184212677|gb|EDU09720.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei
           1655]
 gi|217392055|gb|EEC32081.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei
           576]
 gi|237502787|gb|ACQ95105.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei
           MSHR346]
 gi|238522490|gb|EEP85934.1| flagellar basal-body rod protein FlgF [Burkholderia mallei GB8
           horse 4]
 gi|243062739|gb|EES44925.1| flagellar basal-body rod protein FlgF [Burkholderia mallei PRL-20]
          Length = 253

 Score = 37.9 bits (86), Expect = 0.41,   Method: Composition-based stats.
 Identities = 8/46 (17%), Positives = 16/46 (34%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
              ++  NVN +     M +  R +    + I+ +         LL
Sbjct: 205 PNSLEGSNVNPVAAMVSMIDNARAFELQTKLIQSADQNEQAANQLL 250


>gi|328470102|gb|EGF41013.1| putative flagellar basal-body rod protein [Vibrio parahaemolyticus
           10329]
          Length = 243

 Score = 37.9 bits (86), Expect = 0.42,   Method: Composition-based stats.
 Identities = 6/46 (13%), Positives = 18/46 (39%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
              ++  NV+ + E   +    R +   ++ +K +  +      L+
Sbjct: 195 PEHIEGSNVSAIDELIGVMSLTRNFEMQVRMMKTAETLAQAGNKLM 240


>gi|188579923|ref|YP_001923368.1| flagellar basal body rod protein [Methylobacterium populi BJ001]
 gi|179343421|gb|ACB78833.1| flagellar basal body rod protein [Methylobacterium populi BJ001]
          Length = 242

 Score = 37.9 bits (86), Expect = 0.42,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 19/43 (44%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
            G V+  NVN ++E   +    R + +      ++ + +T  +
Sbjct: 193 QGYVEGANVNPILEMTRLIAIQRAFESAATMTSEADNTLTGAV 235


>gi|167034937|ref|YP_001670168.1| flagellar hook-associated protein FlgK [Pseudomonas putida GB-1]
 gi|166861425|gb|ABY99832.1| flagellar hook-associated protein FlgK [Pseudomonas putida GB-1]
          Length = 680

 Score = 37.9 bits (86), Expect = 0.42,   Method: Composition-based stats.
 Identities = 17/102 (16%), Positives = 30/102 (29%), Gaps = 7/102 (6%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           + +   I  SGL+   A + + S NIANA T+G       Y R+          + G   
Sbjct: 1   MSSLISIGLSGLSASQAALSVTSNNIANAATSG-------YSRQQTIQAAGASHNIGAGF 53

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
              G   +     +         +      +     +     
Sbjct: 54  LGTGTTLADVRRIYSSYLDNQLQTATSLQADSVAFQDQITSI 95


>gi|320015457|gb|ADV99028.1| flagellar hook-associated protein 1 [Yersinia pestis biovar
           Medievalis str. Harbin 35]
          Length = 554

 Score = 37.9 bits (86), Expect = 0.42,   Method: Composition-based stats.
 Identities = 14/97 (14%), Positives = 31/97 (31%)

Query: 8   AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
            + A SGL      +  +S NI N +  G    +  + +   +         GV V  + 
Sbjct: 6   MNTAMSGLNAAQYALSTVSNNITNFQVAGYNRQNTVFAQNGGTITSAGFIGNGVTVTGVN 65

Query: 68  VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
            + + F+          ++     Y  ++ +      
Sbjct: 66  REYNAFITNQLRASQTQSSGLATYYQQISQIDNLLSN 102


>gi|269965650|ref|ZP_06179763.1| putative flagellar hook-associated protein [Vibrio alginolyticus
          40B]
 gi|269829718|gb|EEZ83954.1| putative flagellar hook-associated protein [Vibrio alginolyticus
          40B]
          Length = 107

 Score = 37.9 bits (86), Expect = 0.42,   Method: Composition-based stats.
 Identities = 15/69 (21%), Positives = 24/69 (34%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          +   +IA SGL      + + ++N+AN  T G +                +    GV V 
Sbjct: 1  MNLVNIALSGLGANRVALDVTAQNVANVNTVGYSRQQALMASVDDGKANRLSPGLGVEVT 60

Query: 65 KIGVDQSTF 73
           I      F
Sbjct: 61 SIRRVTDQF 69


>gi|153953797|ref|YP_001394562.1| flagellar basal body rod protein FlgG [Clostridium kluyveri DSM
          555]
 gi|219854413|ref|YP_002471535.1| hypothetical protein CKR_1070 [Clostridium kluyveri NBRC 12016]
 gi|146346678|gb|EDK33214.1| FlgG1 [Clostridium kluyveri DSM 555]
 gi|219568137|dbj|BAH06121.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 255

 Score = 37.9 bits (86), Expect = 0.42,   Method: Composition-based stats.
 Identities = 14/38 (36%), Positives = 21/38 (55%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGS 41
          +I S + A SG+ VQ A+  +I+ N+AN  T G     
Sbjct: 1  MIRSFYTAVSGMIVQEAKQDVITNNLANVNTVGFKQDD 38



 Score = 37.9 bits (86), Expect = 0.48,   Method: Composition-based stats.
 Identities = 13/105 (12%), Positives = 37/105 (35%), Gaps = 2/105 (1%)

Query: 26  SENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVAN 85
           + N+ N   T D  G+             +  +    + K+G   + +  E         
Sbjct: 148 AINVGNGDITSDAYGNISIDGNERYKIYTVDFNDYNDLTKVG--DNLYTGENAAEINTVV 205

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
               ++  N+N++   +D+  T R +  + + ++     +   ++
Sbjct: 206 RQKSLEKSNINLVNTMSDLITTMRTFETDQKVVQSIDGTLDKLIN 250


>gi|153949847|ref|YP_001399640.1| flagellar hook-associated protein FlgK [Yersinia pseudotuberculosis
           IP 31758]
 gi|152961342|gb|ABS48803.1| flagellar hook-associated protein FlgK [Yersinia pseudotuberculosis
           IP 31758]
          Length = 453

 Score = 37.9 bits (86), Expect = 0.42,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 17/39 (43%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN   E  ++ E  R Y +N++ I     + +  L L
Sbjct: 414 SGVNNDEEAINLMEYQRAYQSNMKVIATGDKLFSDLLAL 452



 Score = 36.0 bits (81), Expect = 1.9,   Method: Composition-based stats.
 Identities = 20/126 (15%), Positives = 36/126 (28%), Gaps = 2/126 (1%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           +     A SG+    A +   S NIAN  T G +             +  ++   GV V 
Sbjct: 1   MNFIKTAFSGMQATQAHLNATSMNIANIHTPGYSRQRAEQSAIGADGQGGINAGNGVNVD 60

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL--QTIKQSH 122
            I      +V   +                +  +        T+     N    ++  + 
Sbjct: 61  AIRRLSKQYVVMQEWQANSQQQYYEAGEQYLKAVELMVSNESTSLATGLNNFFSSLSAAT 120

Query: 123 DMMTTT 128
            M  +T
Sbjct: 121 QMPDST 126


>gi|253688971|ref|YP_003018161.1| flagellar basal-body rod protein FlgF [Pectobacterium carotovorum
           subsp. carotovorum PC1]
 gi|251755549|gb|ACT13625.1| flagellar basal-body rod protein FlgF [Pectobacterium carotovorum
           subsp. carotovorum PC1]
          Length = 251

 Score = 37.9 bits (86), Expect = 0.43,   Method: Composition-based stats.
 Identities = 15/102 (14%), Positives = 29/102 (28%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           N     +T       +   +  + +  S     +     Q            V    G++
Sbjct: 147 NPGDPPNTIAQLGRLKLVKATGQEVERSDDGLFRLTQQAQQQRGNVLQNDPTVRIMPGVI 206

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NVN +    DM    R +   ++ I    D       +L
Sbjct: 207 EGSNVNTVDTMVDMIANARRFEMQMKVISSVDDNAQRANQIL 248


>gi|16080693|ref|NP_391521.1| flagellar basal-body rod protein [Bacillus subtilis subsp. subtilis
           str. 168]
 gi|221311597|ref|ZP_03593444.1| flagellar basal-body rod protein [Bacillus subtilis subsp. subtilis
           str. 168]
 gi|221315924|ref|ZP_03597729.1| flagellar basal-body rod protein [Bacillus subtilis subsp. subtilis
           str. NCIB 3610]
 gi|221320837|ref|ZP_03602131.1| flagellar basal-body rod protein [Bacillus subtilis subsp. subtilis
           str. JH642]
 gi|221325122|ref|ZP_03606416.1| flagellar basal-body rod protein [Bacillus subtilis subsp. subtilis
           str. SMY]
 gi|6648066|sp|P39752|FLHO_BACSU RecName: Full=Flagellar hook-basal body complex protein flhO
 gi|1763700|emb|CAB05950.1| flhO [Bacillus subtilis subsp. subtilis str. 168]
 gi|2636165|emb|CAB15657.1| putative flagellar basal-body rod protein [Bacillus subtilis subsp.
           subtilis str. 168]
          Length = 270

 Score = 37.9 bits (86), Expect = 0.43,   Method: Composition-based stats.
 Identities = 17/103 (16%), Positives = 33/103 (32%), Gaps = 2/103 (1%)

Query: 33  RTTGDTPGSDPYRRKTISFEEVMH-GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVK 91
             T  T G    +      E+V +    G  +              +     +   G+ +
Sbjct: 167 NGTVTTNGRTAGQIDVRMAEDVRNLKRDGNDLYSTADGNDLPSAAGNNQVAYSLKQGVSE 226

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSH-DMMTTTLDLLR 133
             NV+V     +M E  R + AN + I+     M     ++ +
Sbjct: 227 LSNVDVTSAYTEMTEAYRSFEANQKVIQAYDKSMDKAANEIGK 269



 Score = 36.4 bits (82), Expect = 1.2,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 20/39 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSD 42
          ++   + A S +  Q  R +++S NIANA T+G      
Sbjct: 1  MLKGLYTATSAMIAQQRRTEMLSNNIANANTSGYKADQG 39


>gi|89100618|ref|ZP_01173476.1| flagellar hook-associated protein K [Bacillus sp. NRRL B-14911]
 gi|89084642|gb|EAR63785.1| flagellar hook-associated protein K [Bacillus sp. NRRL B-14911]
          Length = 527

 Score = 37.9 bits (86), Expect = 0.43,   Method: Composition-based stats.
 Identities = 17/133 (12%), Positives = 41/133 (30%), Gaps = 4/133 (3%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGD----TPGSDPYRRKTISFEEVMHG 57
           D L  S+ IA +  +   +     +  ++  +T       + G   +     S     + 
Sbjct: 388 DILADSSLIAAAATSTGGSGDNDNAHELSQIKTKAFGSFLSKGDAGFPASMTSGNLDTYY 447

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           SG +    +    +            +          V++  E  +M +    Y A  + 
Sbjct: 448 SGIIGRLGVDSQSAQKNANNSIVLADSVDKSRQSVSAVSLDEEMTNMIKFQHAYNAAARN 507

Query: 118 IKQSHDMMTTTLD 130
           I    +M+   ++
Sbjct: 508 ITVVDEMLDKIIN 520



 Score = 33.7 bits (75), Expect = 9.8,   Method: Composition-based stats.
 Identities = 15/104 (14%), Positives = 30/104 (28%), Gaps = 7/104 (6%)

Query: 7   SAHIANSGLAVQSARMQIISENIANARTTGDT------PGSDPYRRKTISFEEVMHGSGG 60
               A  G+  Q + + +   NIANA T G +        + PY   +++  +V    G 
Sbjct: 2   GLETARRGMFTQQSALYVTGHNIANANTPGFSRQRINFEQTSPYPAASMNRPQVPGQMGT 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP-NVNVLVETAD 103
                          +                  ++  + E  +
Sbjct: 62  GVEAGSVQRIREGFLDLQYRVEANKVGYYSSMSESLTKMEEIMN 105


>gi|313903629|ref|ZP_07837019.1| fagellar hook-basal body protein [Thermaerobacter subterraneus DSM
           13965]
 gi|313466182|gb|EFR61706.1| fagellar hook-basal body protein [Thermaerobacter subterraneus DSM
           13965]
          Length = 272

 Score = 37.9 bits (86), Expect = 0.43,   Method: Composition-based stats.
 Identities = 11/80 (13%), Positives = 29/80 (36%), Gaps = 2/80 (2%)

Query: 53  EVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANA--SGIVKYPNVNVLVETADMRETNRL 110
             +  +    ++++G +      E  P  P A     G+++  NV+ +     M    R 
Sbjct: 187 ARVTFANPAGLRRVGDNLWQATAESGPAVPAATPVRQGVLEQSNVDPVQVVVAMLANFRA 246

Query: 111 YMANLQTIKQSHDMMTTTLD 130
           + A  + ++     +   + 
Sbjct: 247 FEAAQRAVQAQDQTLGLAIQ 266


>gi|301168116|emb|CBW27702.1| flagellar basal-body rod protein [Bacteriovorax marinus SJ]
          Length = 135

 Score = 37.9 bits (86), Expect = 0.43,   Method: Composition-based stats.
 Identities = 30/121 (24%), Positives = 41/121 (33%), Gaps = 2/121 (1%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD    +     S L  +  R +IIS NIANA T G       + +      +V      
Sbjct: 1   MDVNDKTLKALASSLNFRQMRQEIISSNIANAETPGYKAKRVDFEQALARALDVDGQQQL 60

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIV--KYPNVNVLVETADMRETNRLYMANLQTI 118
                   D  +            + +GIV      V+   E A M E   LY A +Q I
Sbjct: 61  NTEDSRHFDVGSGGFGNLQPEVYEDPNGIVSEDGNTVDRDAELARMAENKILYDATVQLI 120

Query: 119 K 119
            
Sbjct: 121 N 121


>gi|290474980|ref|YP_003467864.1| flagellar hook-filament junction protein 1 [Xenorhabdus bovienii
          SS-2004]
 gi|289174297|emb|CBJ81087.1| flagellar biosynthesis; hook-filament junction protein 1
          [Xenorhabdus bovienii SS-2004]
          Length = 546

 Score = 37.9 bits (86), Expect = 0.43,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 27/70 (38%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
           + A SG+      M ++  NIAN++  G    +    +   +         GV V  I 
Sbjct: 6  MNTAMSGINAAQVAMGVVGNNIANSKNVGYNRQTTVLTQNNGTLSPAGFIGNGVAVSSIN 65

Query: 68 VDQSTFVEEF 77
           + S F+ + 
Sbjct: 66 REYSEFINQQ 75


>gi|114799934|ref|YP_758986.1| flagellar basal body rod protein FlgF [Hyphomonas neptunium ATCC
           15444]
 gi|114740108|gb|ABI78233.1| flagellar basal-body rod protein FlgF [Hyphomonas neptunium ATCC
           15444]
          Length = 238

 Score = 37.9 bits (86), Expect = 0.43,   Method: Composition-based stats.
 Identities = 11/55 (20%), Positives = 24/55 (43%)

Query: 79  PGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           P        G ++  NV+ ++E + M E  R Y A    +++    ++  +  +R
Sbjct: 182 PTQDAKLVQGALEQSNVSPVLEVSRMIEVQRAYEAGQALLEKEDQRISQLITAVR 236


>gi|91776306|ref|YP_546062.1| flagellar basal-body rod protein FlgB [Methylobacillus flagellatus
           KT]
 gi|91710293|gb|ABE50221.1| flagellar basal-body rod protein FlgB [Methylobacillus flagellatus
           KT]
          Length = 131

 Score = 37.9 bits (86), Expect = 0.43,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 44/120 (36%), Gaps = 3/120 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M+ L A+ +   + L V+  R ++++ NIANA T G       +       + +   SGG
Sbjct: 1   MNKLDAALNFHQTALRVRGQRQELLAANIANADTPGYKARDINFA--DTFKQALTGASGG 58

Query: 61  VRVKKIGVDQSTFVEEFDPGHPV-ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           ++                 G    +   G V    V++ VE     +    Y A+   I 
Sbjct: 59  LKADTTHPGHIPATASHQNGVLYRSIIQGSVDGNTVDMDVERTQFADNALRYEASATMIS 118


>gi|83720527|ref|YP_440802.1| flagellar basal body rod protein FlgF [Burkholderia thailandensis
           E264]
 gi|167617586|ref|ZP_02386217.1| flagellar basal body rod protein FlgF [Burkholderia thailandensis
           Bt4]
 gi|257140547|ref|ZP_05588809.1| flagellar basal body rod protein FlgF [Burkholderia thailandensis
           E264]
 gi|83654352|gb|ABC38415.1| flagellar basal-body rod protein FlgF [Burkholderia thailandensis
           E264]
          Length = 253

 Score = 37.9 bits (86), Expect = 0.43,   Method: Composition-based stats.
 Identities = 8/46 (17%), Positives = 16/46 (34%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
              ++  NVN +     M +  R +    + I+ +         LL
Sbjct: 205 PNSLEGSNVNPVAAMVSMIDNARAFELQTKLIQSADQNEQAANQLL 250


>gi|170742313|ref|YP_001770968.1| flagellar hook-associated protein FlgK [Methylobacterium sp. 4-46]
 gi|168196587|gb|ACA18534.1| flagellar hook-associated protein FlgK [Methylobacterium sp. 4-46]
          Length = 623

 Score = 37.9 bits (86), Expect = 0.43,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 19/43 (44%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             +   V +  E + + +    Y AN + +  + D++ T + +
Sbjct: 581 FSETSGVTIDEELSRLIQLQSAYSANARVLTAARDVLDTLMRI 623


>gi|170024641|ref|YP_001721146.1| flagellar hook-associated protein FlgK [Yersinia pseudotuberculosis
           YPIII]
 gi|169751175|gb|ACA68693.1| flagellar hook-associated protein FlgK [Yersinia pseudotuberculosis
           YPIII]
          Length = 554

 Score = 37.9 bits (86), Expect = 0.44,   Method: Composition-based stats.
 Identities = 14/97 (14%), Positives = 31/97 (31%)

Query: 8   AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
            + A SGL      +  +S NI N +  G    +  + +   +         GV V  + 
Sbjct: 6   MNTAMSGLNAAQYALSTVSNNITNFQVAGYNRQNTVFAQNGGTITSAGFIGNGVTVTGVN 65

Query: 68  VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
            + + F+          ++     Y  ++ +      
Sbjct: 66  REYNAFITNQLRASQTQSSGLATYYQQISQIDNLLSN 102


>gi|160901877|ref|YP_001567458.1| flagellar hook-associated protein FlgK [Petrotoga mobilis SJ95]
 gi|160359521|gb|ABX31135.1| flagellar hook-associated protein FlgK [Petrotoga mobilis SJ95]
          Length = 818

 Score = 37.9 bits (86), Expect = 0.44,   Method: Composition-based stats.
 Identities = 7/37 (18%), Positives = 19/37 (51%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            V++  E  ++ +  + + A+ + I   + MM T ++
Sbjct: 777 GVSIDEEMTNLVKYQQAFNASARVITAVNQMMETVIN 813


>gi|186477698|ref|YP_001859168.1| flagellar basal body rod protein FlgF [Burkholderia phymatum
           STM815]
 gi|184194157|gb|ACC72122.1| flagellar basal-body rod protein FlgF [Burkholderia phymatum
           STM815]
          Length = 252

 Score = 37.9 bits (86), Expect = 0.44,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 16/43 (37%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           ++  NVN +     M    R +    + I+ +     +   LL
Sbjct: 207 LEGSNVNPVSAMVSMITNARQFQMQTKMIESADQNEQSANKLL 249


>gi|114762159|ref|ZP_01441627.1| hypothetical protein 1100011001331_R2601_14510 [Pelagibaca
           bermudensis HTCC2601]
 gi|114545183|gb|EAU48186.1| hypothetical protein R2601_14510 [Roseovarius sp. HTCC2601]
          Length = 125

 Score = 37.9 bits (86), Expect = 0.44,   Method: Composition-based stats.
 Identities = 24/129 (18%), Positives = 50/129 (38%), Gaps = 9/129 (6%)

Query: 4   LIASAHIANSGLAVQ---SARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           +  + ++  + +A+      R  + ++NIANA T G       +      FE  + GS G
Sbjct: 1   MFQNLNVFQTAMALAKHSGLRQALSAQNIANADTPG------YHALDIPDFEATLRGSEG 54

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
            +            ++  P   +  AS      +V++  E       +R +   L   + 
Sbjct: 55  SQRATRDKHLHGLRQDHLPEPTLRRASVDPNGNSVSIEGEMVTAVAASRGHGRALSIYRS 114

Query: 121 SHDMMTTTL 129
           S +++ T+L
Sbjct: 115 SLNILRTSL 123


>gi|51597631|ref|YP_071822.1| flagellar hook-associated protein FlgK [Yersinia pseudotuberculosis
           IP 32953]
 gi|186896765|ref|YP_001873877.1| flagellar hook-associated protein FlgK [Yersinia pseudotuberculosis
           PB1/+]
 gi|51590913|emb|CAH22569.1| putative flagellar hook-associated protein [Yersinia
           pseudotuberculosis IP 32953]
 gi|186699791|gb|ACC90420.1| flagellar hook-associated protein FlgK [Yersinia pseudotuberculosis
           PB1/+]
          Length = 453

 Score = 37.9 bits (86), Expect = 0.44,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 17/39 (43%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN   E  ++ E  R Y +N++ I     + +  L L
Sbjct: 414 SGVNNDEEAMNLMEYQRAYQSNMKVIATGDKLFSDLLAL 452



 Score = 35.6 bits (80), Expect = 2.5,   Method: Composition-based stats.
 Identities = 18/104 (17%), Positives = 30/104 (28%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           +     A SG+    A +   S NIAN  T G +             +  ++   GV V 
Sbjct: 1   MNFIRTAFSGMQATQAHLNATSMNIANMHTPGYSRQRAEQSAIGADGQGGVNAGNGVNVD 60

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            I      +V   +                +N +        T+
Sbjct: 61  GIRRLSQQYVVMQEWRANSQQQYYDAGEQYLNAVELMVSNESTS 104


>gi|260597446|ref|YP_003210017.1| flagellar basal body rod protein FlgF [Cronobacter turicensis
           z3032]
 gi|260216623|emb|CBA29919.1| Flagellar basal-body rod protein flgF [Cronobacter turicensis
           z3032]
          Length = 252

 Score = 37.9 bits (86), Expect = 0.44,   Method: Composition-based stats.
 Identities = 13/102 (12%), Positives = 30/102 (29%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           N     +T       +   +  + +        +     Q+           ++  SG++
Sbjct: 148 NPGDAPNTIAPVGRLKMVKASAQEVVRGDDGLFRLNQQAQTARGATLQADPTISLMSGVL 207

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NV  +    DM    R +   ++ I    +       LL
Sbjct: 208 EGSNVKPVEAMTDMIANARRFEMQMKIISSVDENEQRANQLL 249


>gi|288940415|ref|YP_003442655.1| flagellar hook-associated protein FlgK [Allochromatium vinosum DSM
           180]
 gi|288895787|gb|ADC61623.1| flagellar hook-associated protein FlgK [Allochromatium vinosum DSM
           180]
          Length = 723

 Score = 37.9 bits (86), Expect = 0.44,   Method: Composition-based stats.
 Identities = 14/42 (33%), Positives = 20/42 (47%)

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
              VN+  E A+M    + Y A  Q I  S +M  T L+ +R
Sbjct: 681 LSGVNLDEEAANMIRFQQAYRAAAQVITTSGEMFDTLLNAVR 722


>gi|221640826|ref|YP_002527088.1| flagellar basal body rod protein FlgF [Rhodobacter sphaeroides
           KD131]
 gi|221161607|gb|ACM02587.1| Hypothetical Protein RSKD131_2727 [Rhodobacter sphaeroides KD131]
          Length = 239

 Score = 37.9 bits (86), Expect = 0.44,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 21/54 (38%)

Query: 77  FDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            +P        G ++  NV  + E A M +  R Y      + +  D + TT+ 
Sbjct: 180 TEPAEGATLVQGALEDSNVEPVSEIARMIDVQRAYEMGQSFLDREDDRIRTTVR 233


>gi|161594054|ref|NP_901379.2| flagellar hook-associated protein FlgK [Chromobacterium violaceum
           ATCC 12472]
          Length = 455

 Score = 37.9 bits (86), Expect = 0.44,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 20/40 (50%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
             V    E   + E  ++Y AN++ I  ++ +  +TL +L
Sbjct: 416 SGVQRDEEAVSLIEYQKMYQANMKVIAVANQLFESTLAIL 455



 Score = 34.8 bits (78), Expect = 3.8,   Method: Composition-based stats.
 Identities = 13/70 (18%), Positives = 24/70 (34%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          +   + A SG       +   S+NIAN +T G +        +     + +    GV V 
Sbjct: 1  MRMINNALSGAQAAQVALNTASQNIANQQTPGYSRQGVVLATQAPGAGDPLSAGYGVNVS 60

Query: 65 KIGVDQSTFV 74
           +      + 
Sbjct: 61 NVRRFSDDYK 70


>gi|157738173|ref|YP_001490857.1| flagellar distal rod protein FlgG [Arcobacter butzleri RM4018]
 gi|157700027|gb|ABV68187.1| flagellar distal rod protein FlgG [Arcobacter butzleri RM4018]
          Length = 239

 Score = 37.9 bits (86), Expect = 0.44,   Method: Composition-based stats.
 Identities = 12/109 (11%), Positives = 34/109 (31%), Gaps = 2/109 (1%)

Query: 22  MQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGH 81
           +     N+ NA             +  ++     +         +  +     +     +
Sbjct: 126 VDSNGNNVLNADNEAIVVEDGFESQIGVAKTPYTNLEKMGDNTYLVKNVDEAEQIE--NN 183

Query: 82  PVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
                 G V+  NVN +    ++ + +R +  + + IK   D+    ++
Sbjct: 184 DGRIVRGAVEQSNVNSVTAMVELIDAHRRFDQSQRAIKTIDDLNAGLIE 232


>gi|150390490|ref|YP_001320539.1| flagellar basal-body rod protein FlgB [Alkaliphilus metalliredigens
           QYMF]
 gi|149950352|gb|ABR48880.1| flagellar basal-body rod protein FlgB [Alkaliphilus metalliredigens
           QYMF]
          Length = 136

 Score = 37.9 bits (86), Expect = 0.44,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 49/133 (36%), Gaps = 1/133 (0%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
           + L ++ ++ NS ++    R + IS NIANA T      +  +     +  +    SG  
Sbjct: 3   NGLYSNINLLNSAMSASWVRNEAISNNIANANTPNFKKSTVEFETHLKNALQGNSVSGER 62

Query: 62  -RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
             VK I +      E                  NV++ VE A++ +   ++      I  
Sbjct: 63  THVKHIAIGAERVEEVKYKVRSHEGYRTRRDGNNVDIDVEMAELAKNQVIFNTLSTQINN 122

Query: 121 SHDMMTTTLDLLR 133
               + T ++  R
Sbjct: 123 EFRRIKTAINEGR 135


>gi|332294890|ref|YP_004436813.1| flagellar basal-body rod protein FlgB [Thermodesulfobium narugense
           DSM 14796]
 gi|332177993|gb|AEE13682.1| flagellar basal-body rod protein FlgB [Thermodesulfobium narugense
           DSM 14796]
          Length = 134

 Score = 37.9 bits (86), Expect = 0.45,   Method: Composition-based stats.
 Identities = 19/108 (17%), Positives = 36/108 (33%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
               I   GL+    R +++++NIANA T G       +  +     E    +  ++   
Sbjct: 6   PVFKILGFGLSGAYKRNEVLAQNIANADTPGYKSYDINFMSELKKALEEDQDNIPLKRTN 65

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
                 T     D      N    +   +V+   E A + +    Y +
Sbjct: 66  PLHMSDTPNLNKDFKVVKRNEGTYINGNDVDPERENAMLLDNALYYES 113


>gi|154175436|ref|YP_001408075.1| flagella basal body rod protein [Campylobacter curvus 525.92]
 gi|112802880|gb|EAU00224.1| flagella basal body rod protein [Campylobacter curvus 525.92]
          Length = 273

 Score = 37.9 bits (86), Expect = 0.45,   Method: Composition-based stats.
 Identities = 10/36 (27%), Positives = 15/36 (41%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
             G V+  NVN + E   + ET RL     + +   
Sbjct: 222 MQGYVQMSNVNPVTEMVGLIETQRLVDMYQKVMTSH 257



 Score = 34.1 bits (76), Expect = 5.9,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 19/38 (50%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGS 41
          +    + A +G+  Q +R+ +IS N+AN  T G     
Sbjct: 1  MQNGYYQATAGMVTQFSRLNVISNNLANVNTIGFKRND 38


>gi|332559803|ref|ZP_08414125.1| FlgF2 [Rhodobacter sphaeroides WS8N]
 gi|332277515|gb|EGJ22830.1| FlgF2 [Rhodobacter sphaeroides WS8N]
          Length = 239

 Score = 37.9 bits (86), Expect = 0.45,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 21/54 (38%)

Query: 77  FDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            +P        G ++  NV  + E A M +  R Y      + +  D + TT+ 
Sbjct: 180 TEPAEGATLVQGALEDSNVEPVSEIARMIDVQRAYEMGQSFLDREDDRIRTTVR 233


>gi|321313188|ref|YP_004205475.1| flagellar basal-body rod protein [Bacillus subtilis BSn5]
 gi|320019462|gb|ADV94448.1| flagellar basal-body rod protein [Bacillus subtilis BSn5]
          Length = 270

 Score = 37.9 bits (86), Expect = 0.45,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 19/44 (43%), Gaps = 1/44 (2%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSH-DMMTTTLDLLR 133
           +  NV+V     +M E  R + AN + I+     M     ++ +
Sbjct: 226 ELSNVDVTSAYTEMTEAYRSFEANQKVIQAYDKSMDKAANEIGK 269



 Score = 36.8 bits (83), Expect = 1.2,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 20/39 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSD 42
          ++   + A S +  Q  R +++S NIANA T+G      
Sbjct: 1  MLKGLYTATSAMIAQQRRTEMLSNNIANANTSGYKADQG 39


>gi|296331270|ref|ZP_06873742.1| flagellar basal-body rod protein [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305676257|ref|YP_003867929.1| putative flagellar basal-body rod protein [Bacillus subtilis subsp.
           spizizenii str. W23]
 gi|296151385|gb|EFG92262.1| flagellar basal-body rod protein [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305414501|gb|ADM39620.1| putative flagellar basal-body rod protein [Bacillus subtilis subsp.
           spizizenii str. W23]
          Length = 270

 Score = 37.9 bits (86), Expect = 0.45,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 19/44 (43%), Gaps = 1/44 (2%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSH-DMMTTTLDLLR 133
           +  NV+V     +M E  R + AN + I+     M     ++ +
Sbjct: 226 ELSNVDVTSAYTEMTEAYRSFEANQKVIQAYDKSMDKAANEIGK 269



 Score = 36.8 bits (83), Expect = 1.2,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 20/39 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSD 42
          ++   + A S +  Q  R +++S NIANA T+G      
Sbjct: 1  MLKGLYTATSAMIAQQRRTEMLSNNIANANTSGYKADQG 39


>gi|57505520|ref|ZP_00371447.1| flagellar basal-body rod protein (flgG) [Campylobacter upsaliensis
           RM3195]
 gi|57016067|gb|EAL52854.1| flagellar basal-body rod protein (flgG) [Campylobacter upsaliensis
           RM3195]
          Length = 270

 Score = 37.9 bits (86), Expect = 0.45,   Method: Composition-based stats.
 Identities = 9/50 (18%), Positives = 19/50 (38%), Gaps = 1/50 (2%)

Query: 82  PVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS-HDMMTTTLD 130
             +   G  +  NVN + E   + E NR+     + +     D+    ++
Sbjct: 215 SNSVKQGFSQGSNVNPVSEMVGLIEANRMVEMYQKVMTAHMDDLNQDAIN 264


>gi|330818584|ref|YP_004362289.1| flagellar basal body rod protein FlgF [Burkholderia gladioli BSR3]
 gi|327370977|gb|AEA62333.1| flagellar basal body rod protein FlgF [Burkholderia gladioli BSR3]
          Length = 250

 Score = 37.9 bits (86), Expect = 0.45,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 17/43 (39%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           ++  NVN +     M +  R +  + + I  +     T   +L
Sbjct: 205 LEGSNVNPVAAMVSMLDNARAFQLHTKLISTADQNEQTANQIL 247


>gi|222112269|ref|YP_002554533.1| flagellar basal-body rod protein flgb [Acidovorax ebreus TPSY]
 gi|221731713|gb|ACM34533.1| flagellar basal-body rod protein FlgB [Acidovorax ebreus TPSY]
          Length = 138

 Score = 37.9 bits (86), Expect = 0.45,   Method: Composition-based stats.
 Identities = 27/139 (19%), Positives = 45/139 (32%), Gaps = 15/139 (10%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
           D +        S L ++S R + I+ NIANA T G     D      +      H    +
Sbjct: 3   DKMTNRLDFHGSALLLRSERQRAIASNIANADTPGY-VARDFKFADAMRAVNEAHNPSPL 61

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYP----------NVNVLVETADMRETNRLY 111
           R + +    S       P     ++   + Y            V++  E A   +    Y
Sbjct: 62  RSQSV----SDPRHIPLPAAASGSSDSTLGYALQTQPSLDNNTVDMDRERAAFVDNAVRY 117

Query: 112 MANLQTIKQSHDMMTTTLD 130
            A L+ I      M + + 
Sbjct: 118 EATLRFINGQSKTMLSAIQ 136


>gi|167644972|ref|YP_001682635.1| flagellar hook-associated protein FlgK [Caulobacter sp. K31]
 gi|167347402|gb|ABZ70137.1| flagellar hook-associated protein FlgK [Caulobacter sp. K31]
          Length = 704

 Score = 37.9 bits (86), Expect = 0.45,   Method: Composition-based stats.
 Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 7/62 (11%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            L    ++A SG+      ++++S+NIAN  T G       Y RKTI+   ++    GV
Sbjct: 1  MSLNTILNVATSGMMAAQTGLRVVSDNIANINTAG-------YVRKTIAQSNLVSNGMGV 53

Query: 62 RV 63
           V
Sbjct: 54 GV 55


>gi|316932824|ref|YP_004107806.1| flagellar basal-body rod protein FlgF [Rhodopseudomonas palustris
           DX-1]
 gi|315600538|gb|ADU43073.1| flagellar basal-body rod protein FlgF [Rhodopseudomonas palustris
           DX-1]
          Length = 253

 Score = 37.9 bits (86), Expect = 0.46,   Method: Composition-based stats.
 Identities = 11/60 (18%), Positives = 24/60 (40%)

Query: 71  STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           +   ++  P        G V+  NVN ++E   M +  R Y      ++Q  ++    ++
Sbjct: 187 APTSDQGTPDIKSMLRQGYVEKSNVNSVLEMTRMIDVTRTYTQISAMLQQQSELRKAAIE 246


>gi|254785378|ref|YP_003072807.1| flagellar hook-associated protein FlgK [Teredinibacter turnerae
           T7901]
 gi|237685158|gb|ACR12422.1| flagellar hook-associated protein FlgK [Teredinibacter turnerae
           T7901]
          Length = 1060

 Score = 37.9 bits (86), Expect = 0.46,   Method: Composition-based stats.
 Identities = 19/98 (19%), Positives = 31/98 (31%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
                I+ +GL    A +     NI+NA   G +           +F    +   G  ++
Sbjct: 3   SNLLGISITGLRAAQASLSTTGHNISNAGVEGYSRQRVNIETNPATFNGSHYIGSGANIQ 62

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETA 102
           +I    + FV E         A   + Y  V  L    
Sbjct: 63  EIERFANDFVSEQLRQDSALAADMNIYYDYVRQLDNLL 100


>gi|188592118|ref|YP_001796716.1| flagellar basal body rod protein flgf [Cupriavidus taiwanensis LMG
           19424]
 gi|170938492|emb|CAP63479.1| Flagellar basal-body rod protein flgF [Cupriavidus taiwanensis LMG
           19424]
          Length = 247

 Score = 37.9 bits (86), Expect = 0.46,   Method: Composition-based stats.
 Identities = 11/62 (17%), Positives = 21/62 (33%)

Query: 71  STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
               +  +    V   SG ++  NVN      +M    R +   ++ I+ +         
Sbjct: 183 RPGAQPLEADPTVRVISGALEGSNVNPTEAMVEMIANARRFEMQMKMIQGADGNEQRANQ 242

Query: 131 LL 132
           LL
Sbjct: 243 LL 244


>gi|22126384|ref|NP_669807.1| flagellar hook-associated protein FlgK [Yersinia pestis KIM 10]
 gi|45441403|ref|NP_992942.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar
           Microtus str. 91001]
 gi|51596017|ref|YP_070208.1| flagellar hook-associated protein FlgK [Yersinia pseudotuberculosis
           IP 32953]
 gi|108807179|ref|YP_651095.1| flagellar hook-associated protein FlgK [Yersinia pestis Antiqua]
 gi|108812477|ref|YP_648244.1| flagellar hook-associated protein FlgK [Yersinia pestis Nepal516]
 gi|145598604|ref|YP_001162680.1| flagellar hook-associated protein FlgK [Yersinia pestis Pestoides
           F]
 gi|149366245|ref|ZP_01888280.1| flagellar hook-associated protein 1 [Yersinia pestis CA88-4125]
 gi|153948415|ref|YP_001401283.1| flagellar hook-associated protein FlgK [Yersinia pseudotuberculosis
           IP 31758]
 gi|162421752|ref|YP_001606478.1| flagellar hook-associated protein FlgK [Yersinia pestis Angola]
 gi|165925892|ref|ZP_02221724.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165938764|ref|ZP_02227319.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|166010871|ref|ZP_02231769.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166210949|ref|ZP_02236984.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|167401050|ref|ZP_02306553.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167420208|ref|ZP_02311961.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167425863|ref|ZP_02317616.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|167467496|ref|ZP_02332200.1| flagellar hook-associated protein FlgK [Yersinia pestis FV-1]
 gi|186895120|ref|YP_001872232.1| flagellar hook-associated protein FlgK [Yersinia pseudotuberculosis
           PB1/+]
 gi|218928928|ref|YP_002346803.1| flagellar hook-associated protein FlgK [Yersinia pestis CO92]
 gi|229896251|ref|ZP_04511421.1| flagellar hook-associated protein 1 [Yersinia pestis Pestoides A]
 gi|229897188|ref|ZP_04512344.1| flagellar hook-associated protein 1 [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229897915|ref|ZP_04513066.1| flagellar hook-associated protein 1 [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229902854|ref|ZP_04517971.1| flagellar hook-associated protein 1 [Yersinia pestis Nepal516]
 gi|270486639|ref|ZP_06203713.1| flagellar hook-associated protein FlgK [Yersinia pestis KIM D27]
 gi|294504024|ref|YP_003568086.1| flagellar hook-associated protein [Yersinia pestis Z176003]
 gi|21959370|gb|AAM86058.1|AE013853_6 flagellar biosynthesis protein, hook-filament junction protein 1
           [Yersinia pestis KIM 10]
 gi|45436263|gb|AAS61819.1| flagellar hook-associated protein 1 [Yersinia pestis biovar
           Microtus str. 91001]
 gi|51589299|emb|CAH20920.1| flagellar hook-associated protein 1 [Yersinia pseudotuberculosis IP
           32953]
 gi|108776125|gb|ABG18644.1| flagellar hook-associated protein 1 [Yersinia pestis Nepal516]
 gi|108779092|gb|ABG13150.1| flagellar hook-associated protein 1 [Yersinia pestis Antiqua]
 gi|115347539|emb|CAL20448.1| flagellar hook-associated protein 1 [Yersinia pestis CO92]
 gi|145210300|gb|ABP39707.1| flagellar hook-associated protein 1 [Yersinia pestis Pestoides F]
 gi|149292658|gb|EDM42732.1| flagellar hook-associated protein 1 [Yersinia pestis CA88-4125]
 gi|152959910|gb|ABS47371.1| flagellar hook-associated protein FlgK [Yersinia pseudotuberculosis
           IP 31758]
 gi|162354567|gb|ABX88515.1| flagellar hook-associated protein FlgK [Yersinia pestis Angola]
 gi|165913378|gb|EDR32000.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|165922096|gb|EDR39273.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165990215|gb|EDR42516.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166208129|gb|EDR52609.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|166961903|gb|EDR57924.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167049439|gb|EDR60847.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167055262|gb|EDR65059.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|186698146|gb|ACC88775.1| flagellar hook-associated protein FlgK [Yersinia pseudotuberculosis
           PB1/+]
 gi|229680301|gb|EEO76400.1| flagellar hook-associated protein 1 [Yersinia pestis Nepal516]
 gi|229688956|gb|EEO81021.1| flagellar hook-associated protein 1 [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229693525|gb|EEO83574.1| flagellar hook-associated protein 1 [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229701174|gb|EEO89203.1| flagellar hook-associated protein 1 [Yersinia pestis Pestoides A]
 gi|262361790|gb|ACY58511.1| flagellar hook-associated protein [Yersinia pestis D106004]
 gi|262366074|gb|ACY62631.1| flagellar hook-associated protein [Yersinia pestis D182038]
 gi|270335143|gb|EFA45920.1| flagellar hook-associated protein FlgK [Yersinia pestis KIM D27]
 gi|294354483|gb|ADE64824.1| flagellar hook-associated protein [Yersinia pestis Z176003]
          Length = 554

 Score = 37.9 bits (86), Expect = 0.46,   Method: Composition-based stats.
 Identities = 14/97 (14%), Positives = 31/97 (31%)

Query: 8   AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
            + A SGL      +  +S NI N +  G    +  + +   +         GV V  + 
Sbjct: 6   MNTAMSGLNAAQYALSTVSNNITNFQVAGYNRQNTVFAQNGGTITSAGFIGNGVTVTGVN 65

Query: 68  VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
            + + F+          ++     Y  ++ +      
Sbjct: 66  REYNAFITNQLRASQTQSSGLATYYQQISQIDNLLSN 102


>gi|54307275|ref|YP_128295.1| flagellar hook-associated protein [Photobacterium profundum SS9]
 gi|46911695|emb|CAG18493.1| Hypothetical flagellar hook-associated protein [Photobacterium
           profundum SS9]
          Length = 468

 Score = 37.9 bits (86), Expect = 0.46,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 19/41 (46%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             VN+  E A +    ++Y AN + I  +  +   TL + R
Sbjct: 428 SGVNLDEEAASIMTYTQMYQANAKVISTAQQLFDVTLAMFR 468



 Score = 35.6 bits (80), Expect = 2.1,   Method: Composition-based stats.
 Identities = 18/104 (17%), Positives = 35/104 (33%), Gaps = 4/104 (3%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           ++  +I  SGL   +A + + S NIANA T G +     +  +            GV V 
Sbjct: 1   MSLINIGLSGLNAANAGLSVTSHNIANAMTPGFSRQRVGFGAQV----SAGSQGAGVGVS 56

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            +      ++ +       +     +    +       +   TN
Sbjct: 57  SVERMADNYLNQQIYKQNGSWGFNKISSQYMQKTESLLNNASTN 100


>gi|293395584|ref|ZP_06639867.1| flagellar basal-body rod protein FlgF [Serratia odorifera DSM 4582]
 gi|291421903|gb|EFE95149.1| flagellar basal-body rod protein FlgF [Serratia odorifera DSM 4582]
          Length = 251

 Score = 37.9 bits (86), Expect = 0.46,   Method: Composition-based stats.
 Identities = 9/49 (18%), Positives = 17/49 (34%)

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
               G+++  NV  +    DM    R +   ++ I    +       LL
Sbjct: 200 QVMPGVIEGSNVKPMETMVDMIANARRFEMQMKVIHSVDENEQRANSLL 248


>gi|209884510|ref|YP_002288367.1| flagellar hook-associated protein FlgK [Oligotropha carboxidovorans
           OM5]
 gi|209872706|gb|ACI92502.1| flagellar hook-associated protein FlgK [Oligotropha carboxidovorans
           OM5]
          Length = 624

 Score = 37.9 bits (86), Expect = 0.46,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 15/38 (39%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             VN+  E A +      Y AN + +    DM  + L 
Sbjct: 585 SGVNIDEEMAHLLALQNAYSANARVMSTVKDMFDSLLR 622


>gi|152990394|ref|YP_001356116.1| flagellar hook-associated protein 1 FliK [Nitratiruptor sp.
           SB155-2]
 gi|151422255|dbj|BAF69759.1| flagellar hook-associated protein 1 FliK [Nitratiruptor sp.
           SB155-2]
          Length = 596

 Score = 37.9 bits (86), Expect = 0.46,   Method: Composition-based stats.
 Identities = 8/41 (19%), Positives = 19/41 (46%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             VN+  E   + +  R Y A  + +  + ++  T +++ R
Sbjct: 556 SGVNLDEELVKLTQLQRSYQATARVMMVTDELFKTLIEMTR 596


>gi|90577350|ref|ZP_01233161.1| putative flagellar hook-associated protein [Vibrio angustum S14]
 gi|90440436|gb|EAS65616.1| putative flagellar hook-associated protein [Vibrio angustum S14]
          Length = 455

 Score = 37.9 bits (86), Expect = 0.46,   Method: Composition-based stats.
 Identities = 16/98 (16%), Positives = 34/98 (34%), Gaps = 2/98 (2%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           +   +I  +GL      + + + NIAN  T G +          ++  +++    GV + 
Sbjct: 1   MNMINIGLTGLNANKTALDVTAHNIANVNTPGFSRQQA--MMNALAGNDILSAGSGVEIA 58

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETA 102
            I      F+ +         A+      N+ +L    
Sbjct: 59  SIRRISDQFIVKQTWAATSQQAASNANLDNMTMLESLL 96



 Score = 37.5 bits (85), Expect = 0.65,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 20/41 (48%)

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
              VN   E A++      Y AN++ I  ++++  + L LL
Sbjct: 415 LSAVNSDEEAANLMTFTNAYQANMKVISTANELFDSVLRLL 455


>gi|161485722|ref|NP_660672.3| flagellar basal body rod protein FlgF [Buchnera aphidicola str. Sg
           (Schizaphis graminum)]
 gi|25008455|sp|Q8K9K5|FLGF_BUCAP RecName: Full=Flagellar basal-body rod protein flgF
 gi|21623236|gb|AAM67883.1| flagellar basal-body rod protein FlgF [Buchnera aphidicola str. Sg
           (Schizaphis graminum)]
          Length = 249

 Score = 37.9 bits (86), Expect = 0.47,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 16/46 (34%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            S +++  NVN      DM    R +  N++ I            L
Sbjct: 199 QSEMLEASNVNPTKNMIDMISNARQFEMNMKIISMCDQNTEYANQL 244


>gi|88811802|ref|ZP_01127056.1| hypothetical protein NB231_05335 [Nitrococcus mobilis Nb-231]
 gi|88791193|gb|EAR22306.1| hypothetical protein NB231_05335 [Nitrococcus mobilis Nb-231]
          Length = 246

 Score = 37.9 bits (86), Expect = 0.47,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 20/44 (45%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  NVN +    +M    R + A ++ ++ +     T   LLR
Sbjct: 201 LESSNVNTVDALVNMIGNARRFEAYVKLMESAKSNDETGQRLLR 244


>gi|156934434|ref|YP_001438350.1| flagellar hook-associated protein FlgK [Cronobacter sakazakii ATCC
           BAA-894]
 gi|156532688|gb|ABU77514.1| hypothetical protein ESA_02265 [Cronobacter sakazakii ATCC BAA-894]
          Length = 552

 Score = 37.9 bits (86), Expect = 0.47,   Method: Composition-based stats.
 Identities = 16/95 (16%), Positives = 34/95 (35%)

Query: 8   AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
            + A SGL+     +  +S NI+N    G T  +    +   +  +      GV V  I 
Sbjct: 6   INSAMSGLSAAQTALSTVSNNISNYNVAGYTRQTTVLGQSNSTMTQGGWVGNGVYVSGIQ 65

Query: 68  VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETA 102
            +   F+          ++    +Y  ++ + +  
Sbjct: 66  REYDAFITNQLNAAQNQSSGLTTRYEQMSKIDDMV 100


>gi|186477704|ref|YP_001859174.1| flagellar hook-associated protein FlgK [Burkholderia phymatum
           STM815]
 gi|184194163|gb|ACC72128.1| flagellar hook-associated protein FlgK [Burkholderia phymatum
           STM815]
          Length = 657

 Score = 37.9 bits (86), Expect = 0.47,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 21/39 (53%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN+  E A++ +  +LY AN + I+ +  +  T L +
Sbjct: 617 SGVNINEEAANLLQYQQLYQANSKVIQTAQTLFQTILGI 655



 Score = 34.8 bits (78), Expect = 3.9,   Method: Composition-based stats.
 Identities = 16/98 (16%), Positives = 28/98 (28%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
                I  SGL      +    +NI+N  T G +     Y   +  +    +   GV   
Sbjct: 3   SNLFSIGLSGLNAAQWGLTTTGQNISNQATPGYSVERPVYAESSGQYTGSGYLGSGVSTT 62

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETA 102
            +    S ++          + S    Y  +  L    
Sbjct: 63  TVQRQYSQYLTTELNNAQSQSGSLNSYYNLIAQLNNMV 100


>gi|56695116|ref|YP_165463.1| flagellar hook-associated protein FlgK [Ruegeria pomeroyi DSS-3]
 gi|56676853|gb|AAV93519.1| flagellar hook-associated protein FlgK, putative [Ruegeria pomeroyi
           DSS-3]
          Length = 483

 Score = 37.9 bits (86), Expect = 0.47,   Method: Composition-based stats.
 Identities = 19/102 (18%), Positives = 37/102 (36%), Gaps = 1/102 (0%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           NA     T    P   +  + +   +  G   + ++  ++S   E              +
Sbjct: 382 NAFHQALTATRTPSDPRFGTGDMTANQVGAALLSRVAQNESLATERLTFASASRTEMQKL 441

Query: 91  KY-PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +    V+  VE   + +  + Y AN + I+   +MM T L L
Sbjct: 442 ELEQGVDTDVELQMLMQIEQAYAANARMIETVGEMMDTLLRL 483



 Score = 34.1 bits (76), Expect = 6.0,   Method: Composition-based stats.
 Identities = 22/84 (26%), Positives = 34/84 (40%), Gaps = 7/84 (8%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            + A+ + A SGL   S    + S+NIANA T G       Y R+++       G  GV
Sbjct: 1  MTISAALNSALSGLTAASRATGVASDNIANALTPG-------YARRSLEVAGNTIGGAGV 53

Query: 62 RVKKIGVDQSTFVEEFDPGHPVAN 85
          R+  +  +    +     G   A 
Sbjct: 54 RILGVVRNSDPVLLASRRGADAAQ 77


>gi|85715030|ref|ZP_01046015.1| hypothetical protein NB311A_11677 [Nitrobacter sp. Nb-311A]
 gi|85698227|gb|EAQ36099.1| hypothetical protein NB311A_11677 [Nitrobacter sp. Nb-311A]
          Length = 620

 Score = 37.9 bits (86), Expect = 0.47,   Method: Composition-based stats.
 Identities = 25/88 (28%), Positives = 39/88 (44%), Gaps = 7/88 (7%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            L ++  IA SGL    A + I+S N+ANA T G       Y  +T+  ++++ GS G 
Sbjct: 1  MSLSSALSIAMSGLRANQAALSIVSGNVANANTPG-------YVAQTLVQDQIVTGSTGS 53

Query: 62 RVKKIGVDQSTFVEEFDPGHPVANASGI 89
           V+ IGV ++               S  
Sbjct: 54 GVRIIGVSRTLDAYVQSQLRTENAGSAY 81



 Score = 37.9 bits (86), Expect = 0.49,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 15/45 (33%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
                    VN+  E A++      Y AN   +     MM T L 
Sbjct: 575 QKKFDAEAGVNMDTEMANLIALQNSYAANAHVMTVVQSMMQTLLQ 619


>gi|238751767|ref|ZP_04613255.1| hypothetical protein yrohd0001_35400 [Yersinia rohdei ATCC 43380]
 gi|238710038|gb|EEQ02268.1| hypothetical protein yrohd0001_35400 [Yersinia rohdei ATCC 43380]
          Length = 549

 Score = 37.9 bits (86), Expect = 0.48,   Method: Composition-based stats.
 Identities = 22/129 (17%), Positives = 46/129 (35%), Gaps = 7/129 (5%)

Query: 8   AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
            + A SGL+     +  +S NI+N +  G    +  + +   +         GV V  I 
Sbjct: 1   MNTAMSGLSAAQYGLSTVSNNISNYQVAGYNRQNAIFTQNGGTLSSAGFIGNGVTVTGIN 60

Query: 68  VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETA-----DMRETNRLYMANLQ--TIKQ 120
            + ++F+          ++     Y  V+ +         ++  T + + +NLQ      
Sbjct: 61  REYNSFITNQLRTAQTQSSGLTTYYQQVSQIDNLLANSSNNLSTTMQAFFSNLQNLVSNA 120

Query: 121 SHDMMTTTL 129
             D    T+
Sbjct: 121 DDDAARKTV 129


>gi|224417700|ref|ZP_03655706.1| flagellar basal-body rod protein FlgG [Helicobacter canadensis MIT
           98-5491]
 gi|253827049|ref|ZP_04869934.1| flagellar distal rod protein FlgF [Helicobacter canadensis MIT
           98-5491]
 gi|313141243|ref|ZP_07803436.1| flagellar basal-body rod protein flgg [Helicobacter canadensis MIT
           98-5491]
 gi|253510455|gb|EES89114.1| flagellar distal rod protein FlgF [Helicobacter canadensis MIT
           98-5491]
 gi|313130274|gb|EFR47891.1| flagellar basal-body rod protein flgg [Helicobacter canadensis MIT
           98-5491]
          Length = 277

 Score = 37.9 bits (86), Expect = 0.48,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 25/59 (42%), Gaps = 1/59 (1%)

Query: 73  FVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS-HDMMTTTLD 130
             E        A   G ++  N+NV+ E   + ETNRL  A  + +K    D+ T  + 
Sbjct: 213 MNEMEVLERSGAVRQGYLEKSNINVVYEMTGLIETNRLVEAYSKVLKTHMDDLNTEAIT 271



 Score = 36.4 bits (82), Expect = 1.2,   Method: Composition-based stats.
 Identities = 12/38 (31%), Positives = 19/38 (50%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGS 41
          +    + +  G+  Q  R+ +I+ NIANA TTG     
Sbjct: 1  MQGGYYSSVGGMVTQINRLDVIANNIANANTTGFKRDD 38


>gi|190574257|ref|YP_001972102.1| flagellar hook-associated protein FlgK [Stenotrophomonas
           maltophilia K279a]
 gi|190012179|emb|CAQ45802.1| putative flagellar hook-associated protein [Stenotrophomonas
           maltophilia K279a]
          Length = 626

 Score = 37.9 bits (86), Expect = 0.48,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 17/39 (43%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
           +   VN+  E ADM    + Y A  Q I  +  M  T L
Sbjct: 583 EVSGVNLDEEAADMLRLQQAYQAASQLISTADSMFQTIL 621


>gi|115523176|ref|YP_780087.1| flagellar basal body rod protein FlgB [Rhodopseudomonas palustris
           BisA53]
 gi|115517123|gb|ABJ05107.1| flagellar basal body rod protein [Rhodopseudomonas palustris
           BisA53]
          Length = 134

 Score = 37.9 bits (86), Expect = 0.48,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 39/120 (32%), Gaps = 3/120 (2%)

Query: 8   AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
             +A+S     S R   IS N+ANA T G          K +  + V       R    G
Sbjct: 14  FDVASSHAQWLSLRQASISSNVANANTPGYRAQDIEPFAKILDAKVVPVAVTNPRHITTG 73

Query: 68  VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
              S             +   +    +V++  E     + NR Y  N   +K  H M  T
Sbjct: 74  SITSE---RAQGMRKEDSWDVVHSGNSVSLEQEMLKAGDINRDYSLNTAIVKSFHRMFMT 130


>gi|13472573|ref|NP_104140.1| flagellar basal body rod protein FlgB [Mesorhizobium loti
           MAFF303099]
 gi|14023319|dbj|BAB49926.1| flagellar basal-body rod protein; FlgB [Mesorhizobium loti
           MAFF303099]
          Length = 126

 Score = 37.9 bits (86), Expect = 0.48,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 34/111 (30%), Gaps = 4/111 (3%)

Query: 19  SARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFD 78
           S R   I+ NIANA T G T        K +    V   +            + F  +  
Sbjct: 18  SVRQSAIAGNIANANTPGYTANDVEPFEKVLDRTAVSLQTTEAGHLGSAATNAGFTVKPQ 77

Query: 79  PGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
               V   S       V +  +     E  R +  N   +K  H MM   +
Sbjct: 78  EDDGVIMPS----KNTVVLEDQLLKAGEVRRSFELNTAIVKAFHSMMMMAV 124


>gi|126463747|ref|YP_001044861.1| flagellar basal body rod protein FlgF [Rhodobacter sphaeroides ATCC
           17029]
 gi|126105411|gb|ABN78089.1| protein of unknown function DUF1078 domain protein [Rhodobacter
           sphaeroides ATCC 17029]
          Length = 239

 Score = 37.9 bits (86), Expect = 0.48,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 21/54 (38%)

Query: 77  FDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            +P        G ++  NV  + E A M +  R Y      + +  D + TT+ 
Sbjct: 180 TEPAEGATLVQGALEDSNVEPVSEIARMIDVQRAYEMGQSFLDREDDRIRTTVR 233


>gi|332284020|ref|YP_004415931.1| flagellar basal body rod protein FlgF [Pusillimonas sp. T7-7]
 gi|330427973|gb|AEC19307.1| flagellar basal body rod protein FlgF [Pusillimonas sp. T7-7]
          Length = 248

 Score = 37.9 bits (86), Expect = 0.48,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 16/45 (35%)

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           G V+  NVN       M    R +   ++ I+ +         +L
Sbjct: 201 GFVEKSNVNPAEAMVGMIANARRFEMQMKVIQDASSNAERANSIL 245


>gi|309788145|ref|ZP_07682751.1| flagellar basal-body rod protein flgF [Shigella dysenteriae 1617]
 gi|308923997|gb|EFP69498.1| flagellar basal-body rod protein flgF [Shigella dysenteriae 1617]
          Length = 123

 Score = 37.9 bits (86), Expect = 0.48,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 32/102 (31%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           N     +T       +   +    +        +     Q+T          +   SG++
Sbjct: 19  NPGDPANTVAPVGRLKLVKATGSEVQRGDDGIFRLSAESQATRGPVLQADPTLRVMSGVL 78

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NVN +   +DM  + R +   ++ I    D       LL
Sbjct: 79  EGSNVNAVAAMSDMIASARRFEMQMKVISSVDDNAGRANQLL 120


>gi|170022971|ref|YP_001719476.1| flagellar basal body rod protein [Yersinia pseudotuberculosis
          YPIII]
 gi|169749505|gb|ACA67023.1| flagellar basal body rod protein [Yersinia pseudotuberculosis
          YPIII]
          Length = 102

 Score = 37.9 bits (86), Expect = 0.48,   Method: Composition-based stats.
 Identities = 19/65 (29%), Positives = 26/65 (40%), Gaps = 5/65 (7%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          S  IAN+ L   + ++  IS NIAN+ T G         R   S         GV V  +
Sbjct: 2  SFSIANTALNAHTEQLNTISNNIANSATKGFKA-----SRTEFSSMYAQSQPLGVAVSGV 56

Query: 67 GVDQS 71
            + S
Sbjct: 57 SQNIS 61


>gi|85859195|ref|YP_461397.1| flagellar basal-body rod protein [Syntrophus aciditrophicus SB]
 gi|85722286|gb|ABC77229.1| flagellar basal-body rod protein [Syntrophus aciditrophicus SB]
          Length = 255

 Score = 37.9 bits (86), Expect = 0.48,   Method: Composition-based stats.
 Identities = 6/34 (17%), Positives = 14/34 (41%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
           ++  NV+ + E   M +  R +    + I    +
Sbjct: 209 LELSNVSAIKEMIQMIDLQRTFETYQKLIHSIDE 242


>gi|330502735|ref|YP_004379604.1| flagellar basal body rod protein FlgF [Pseudomonas mendocina NK-01]
 gi|328917021|gb|AEB57852.1| flagellar basal body rod protein FlgF [Pseudomonas mendocina NK-01]
          Length = 246

 Score = 37.9 bits (86), Expect = 0.49,   Method: Composition-based stats.
 Identities = 11/60 (18%), Positives = 27/60 (45%)

Query: 74  VEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             E +    V   SG ++  NVN + E   +   +R +  +++ ++ + D  +    +L+
Sbjct: 185 QPEVEADATVQVTSGFLEASNVNAVEEMTAILSLSRQFELSVKMMRTAEDNSSAMARVLQ 244


>gi|315453646|ref|YP_004073916.1| putative flagellar basal-body rod protein [Helicobacter felis ATCC
           49179]
 gi|315132698|emb|CBY83326.1| putative flagellar basal-body rod protein [Helicobacter felis ATCC
           49179]
          Length = 271

 Score = 37.9 bits (86), Expect = 0.49,   Method: Composition-based stats.
 Identities = 12/62 (19%), Positives = 22/62 (35%), Gaps = 1/62 (1%)

Query: 70  QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS-HDMMTTT 128
               + E    +      G ++  NVN + E   + E NRL     + ++    DM    
Sbjct: 204 PQERMAERVELNAPIVHQGFLEKSNVNAVREMTRLIEANRLVDMYSKVLRTHMDDMHAEA 263

Query: 129 LD 130
           + 
Sbjct: 264 IS 265


>gi|269960117|ref|ZP_06174493.1| Flagellar basal-body rod protein flgF [Vibrio harveyi 1DA3]
 gi|269835088|gb|EEZ89171.1| Flagellar basal-body rod protein flgF [Vibrio harveyi 1DA3]
          Length = 243

 Score = 37.9 bits (86), Expect = 0.49,   Method: Composition-based stats.
 Identities = 8/56 (14%), Positives = 21/56 (37%)

Query: 77  FDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           F     V  +   ++  NV+ + E   +    R +   ++ +K +  +      L+
Sbjct: 185 FPADETVQLSPEHIEGSNVSAIDELLSVMSLTRNFEMQVRMMKTAETLAQAGNKLM 240


>gi|291486215|dbj|BAI87290.1| flagellar basal-body rod protein [Bacillus subtilis subsp. natto
           BEST195]
          Length = 270

 Score = 37.9 bits (86), Expect = 0.49,   Method: Composition-based stats.
 Identities = 17/103 (16%), Positives = 33/103 (32%), Gaps = 2/103 (1%)

Query: 33  RTTGDTPGSDPYRRKTISFEEVMH-GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVK 91
             T  T G    +      E+V +    G  +              +     +   G+ +
Sbjct: 167 NGTVTTNGRTAGQIDVRMAEDVRNLKRDGNDLYSTADGNDLPSAAGNNQVSYSLKQGVSE 226

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSH-DMMTTTLDLLR 133
             NV+V     +M E  R + AN + I+     M     ++ +
Sbjct: 227 LSNVDVTSAYTEMTEAYRSFEANQKVIQAYDKSMDKAANEIGK 269



 Score = 36.4 bits (82), Expect = 1.3,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 20/39 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSD 42
          ++   + A S +  Q  R +++S NIANA T+G      
Sbjct: 1  MLKGLYTATSAMIAQQRRTEMLSNNIANANTSGYKADQG 39


>gi|167835112|ref|ZP_02461995.1| flagellar basal body rod protein FlgF [Burkholderia thailandensis
           MSMB43]
          Length = 253

 Score = 37.9 bits (86), Expect = 0.49,   Method: Composition-based stats.
 Identities = 8/46 (17%), Positives = 16/46 (34%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
              ++  NVN +     M +  R +    + I+ +         LL
Sbjct: 205 PNSLEGSNVNPVAAMVSMIDNARAFELQTKLIQSADQNEQAANQLL 250


>gi|15607023|ref|NP_214405.1| flagellar hook basal-body protein FlgG [Aquifex aeolicus VF5]
 gi|2984276|gb|AAC07801.1| flagellar hook basal-body protein FlgG [Aquifex aeolicus VF5]
          Length = 241

 Score = 37.9 bits (86), Expect = 0.49,   Method: Composition-based stats.
 Identities = 9/55 (16%), Positives = 18/55 (32%)

Query: 73  FVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
           F     P        G  +  NVN + E   + E    +    + I+ + ++   
Sbjct: 182 FQGNPTPATDYRVYQGFYEASNVNAVKEMVKVIEAVSAHEIFSKLIQMTDEVQGK 236


>gi|254780381|ref|YP_003064794.1| flagellar basal body rod protein FlgB [Candidatus Liberibacter
           asiaticus str. psy62]
 gi|254040058|gb|ACT56854.1| flagellar basal body rod protein FlgB [Candidatus Liberibacter
           asiaticus str. psy62]
          Length = 130

 Score = 37.9 bits (86), Expect = 0.50,   Method: Composition-based stats.
 Identities = 25/130 (19%), Positives = 42/130 (32%), Gaps = 1/130 (0%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M  +     IA+      S R +I+SENIANA T              ++   +M  +  
Sbjct: 1   MQPIT-FFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFLMARTHE 59

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
             +K+       +                V    V +  E         LY  N + IK+
Sbjct: 60  THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119

Query: 121 SHDMMTTTLD 130
            + M+   + 
Sbjct: 120 LNSMVMHVVR 129


>gi|20806999|ref|NP_622170.1| flagellar hook-associated protein FlgK [Thermoanaerobacter
           tengcongensis MB4]
 gi|20515482|gb|AAM23774.1| Flagellar hook-associated protein [Thermoanaerobacter tengcongensis
           MB4]
          Length = 482

 Score = 37.9 bits (86), Expect = 0.50,   Method: Composition-based stats.
 Identities = 7/38 (18%), Positives = 18/38 (47%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             V++  E  +M +  + Y A  + I    +++ T ++
Sbjct: 438 SGVSLDEEMTNMLKYQKSYAACARVITAMDELIDTVIN 475



 Score = 35.2 bits (79), Expect = 2.9,   Method: Composition-based stats.
 Identities = 14/87 (16%), Positives = 28/87 (32%), Gaps = 1/87 (1%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDP-YRRKTISFEEVMHGSGGVRV 63
               IA +GL V    +++   NIANA T G T            +   +    G    
Sbjct: 4  FQGLEIAKTGLFVSQKALEVTGHNIANANTPGYTRQVVDMASIAPPTTFGMYDQWGKAIG 63

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIV 90
          + + +     + +    +     +  +
Sbjct: 64 EGVKIVDIRQIRDQFLDNQYRRENKFL 90


>gi|327478810|gb|AEA82120.1| flagellar basal-body rod protein FlgF [Pseudomonas stutzeri DSM
           4166]
          Length = 234

 Score = 37.9 bits (86), Expect = 0.50,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 27/56 (48%)

Query: 78  DPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            P   V  ASG ++  NV+ + E A     NRL+   ++ +K + D+      ++R
Sbjct: 177 QPSEDVRLASGFLESSNVSAIDELASTMSLNRLFETQVKMMKAAEDLSDAGNRMIR 232


>gi|238764397|ref|ZP_04625347.1| hypothetical protein ykris0001_37640 [Yersinia kristensenii ATCC
           33638]
 gi|238697423|gb|EEP90190.1| hypothetical protein ykris0001_37640 [Yersinia kristensenii ATCC
           33638]
          Length = 338

 Score = 37.9 bits (86), Expect = 0.50,   Method: Composition-based stats.
 Identities = 15/101 (14%), Positives = 34/101 (33%)

Query: 8   AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
            + A SGL+     +  +S NI+N +  G    +  + +   +         GV V  + 
Sbjct: 1   MNTAMSGLSAAQYALSTVSNNISNFQVAGYNRQNTVFAQNGGTLSPAGFIGNGVAVTGVN 60

Query: 68  VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            + + F+          ++     Y  ++ +         N
Sbjct: 61  REYNAFITNQLRASQTQSSGLTTYYQQISQIDNLLSNTSNN 101


>gi|21242730|ref|NP_642312.1| flagellar basal body rod protein FlgB [Xanthomonas axonopodis pv.
           citri str. 306]
 gi|78047589|ref|YP_363764.1| flagellar basal body rod protein FlgB [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|294625271|ref|ZP_06703910.1| flagellar protein [Xanthomonas fuscans subsp. aurantifolii str.
           ICPB 11122]
 gi|294664588|ref|ZP_06729929.1| flagellar protein [Xanthomonas fuscans subsp. aurantifolii str.
           ICPB 10535]
 gi|21108206|gb|AAM36848.1| flagellar protein [Xanthomonas axonopodis pv. citri str. 306]
 gi|78036019|emb|CAJ23710.1| flagellar basal body protein [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|292600445|gb|EFF44543.1| flagellar protein [Xanthomonas fuscans subsp. aurantifolii str.
           ICPB 11122]
 gi|292605645|gb|EFF48955.1| flagellar protein [Xanthomonas fuscans subsp. aurantifolii str.
           ICPB 10535]
          Length = 133

 Score = 37.9 bits (86), Expect = 0.50,   Method: Composition-based stats.
 Identities = 18/129 (13%), Positives = 36/129 (27%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
               +   +    L ++  RM++I+ N++N  T G       +     S +    G    
Sbjct: 3   SPFSSFLGVHGDALTLREQRMKLIASNLSNVDTPGYKAKDLNFEAALKSAQGEQDGGLLQ 62

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
                  +                    +    V+   E A        Y A+L  ++  
Sbjct: 63  TTDAKHYEVGGGAGLNPFQFTREADQPSLDGNTVDPDAERAAYGRAALEYRASLSFLESK 122

Query: 122 HDMMTTTLD 130
              M T + 
Sbjct: 123 VRSMLTAIT 131


>gi|296282278|ref|ZP_06860276.1| flagellar basal-body rod protein FlgF [Citromicrobium bathyomarinum
           JL354]
          Length = 246

 Score = 37.9 bits (86), Expect = 0.51,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 36/109 (33%), Gaps = 2/109 (1%)

Query: 25  ISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVA 84
           ISE+    R+  D P + P     I             +  +   +   +   D    V 
Sbjct: 138 ISEDGTVTRSDPDAPEAPPAEVGRIKLASWEGSPIAKGLDGLFRVEGGGILPLDEEARVH 197

Query: 85  NASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             SG ++  NV        M E  RL+    + +  +  +  +   L+R
Sbjct: 198 --SGALEQSNVKPTEVLVAMIEEQRLFAMRSKLVSTARQLDESGAQLMR 244



 Score = 34.5 bits (77), Expect = 5.5,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 30/70 (42%), Gaps = 5/70 (7%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          MD L    + A SG+     R + I+ N+AN  T G         ++ ++ E   + +  
Sbjct: 1  MDRL---IYTALSGMQASMDRQRAIASNMANTDTLGFRAEL--IEQRAMTIEGHPNEARS 55

Query: 61 VRVKKIGVDQ 70
          ++V ++    
Sbjct: 56 MQVARVTGAD 65


>gi|238793999|ref|ZP_04637617.1| Flagellar basal-body rod protein flgF [Yersinia intermedia ATCC
           29909]
 gi|238726631|gb|EEQ18167.1| Flagellar basal-body rod protein flgF [Yersinia intermedia ATCC
           29909]
          Length = 251

 Score = 37.9 bits (86), Expect = 0.51,   Method: Composition-based stats.
 Identities = 13/102 (12%), Positives = 29/102 (28%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           NA  + +T       ++  +    +              Q     +      +    G++
Sbjct: 147 NAGDSPNTIAQLGQIKRVRANAGEVMHGDDGLFHLTPATQQARGAQLANDPLIKIMPGVL 206

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NV  +    DM    R +   ++ I    +       LL
Sbjct: 207 EGSNVKAVEAMTDMIANARSFEMQMKVIHSVDENEQRANQLL 248


>gi|225375212|ref|ZP_03752433.1| hypothetical protein ROSEINA2194_00837 [Roseburia inulinivorans
          DSM 16841]
 gi|225212879|gb|EEG95233.1| hypothetical protein ROSEINA2194_00837 [Roseburia inulinivorans
          DSM 16841]
          Length = 594

 Score = 37.9 bits (86), Expect = 0.51,   Method: Composition-based stats.
 Identities = 12/36 (33%), Positives = 15/36 (41%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTG 36
          M     S +I  SGL      +   S N+AN  T G
Sbjct: 1  MANGFGSLYIGASGLQNSQNALNTTSNNLANVNTKG 36


>gi|104782841|ref|YP_609339.1| flagellar basal body rod protein FlgF [Pseudomonas entomophila L48]
 gi|95111828|emb|CAK16552.1| flagellar basal-body rod protein FlgF [Pseudomonas entomophila L48]
          Length = 246

 Score = 37.9 bits (86), Expect = 0.51,   Method: Composition-based stats.
 Identities = 10/49 (20%), Positives = 22/49 (44%), Gaps = 3/49 (6%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS---HDMMTTTLDLL 132
           SG ++  NVN + E   +   +R +  +++ +K +      M   L + 
Sbjct: 198 SGFLEGSNVNAVEEMTSVLALSRQFELHVKMMKAAEEGDQAMARVLQIG 246


>gi|259418017|ref|ZP_05741936.1| flagellar basal-body rod protein FlgF [Silicibacter sp. TrichCH4B]
 gi|259346923|gb|EEW58737.1| flagellar basal-body rod protein FlgF [Silicibacter sp. TrichCH4B]
          Length = 238

 Score = 37.9 bits (86), Expect = 0.52,   Method: Composition-based stats.
 Identities = 12/62 (19%), Positives = 22/62 (35%), Gaps = 1/62 (1%)

Query: 74  VEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL-DLL 132
             E  P        G ++  NVN + + A M E  R Y      +      +   + +L+
Sbjct: 177 EGETLPAEGAQVLQGFLEGSNVNTIHQLARMIEVQRAYEMGQSFLDNEDKRIRAAIDNLM 236

Query: 133 RD 134
           + 
Sbjct: 237 KS 238


>gi|300024616|ref|YP_003757227.1| flagellar basal-body rod protein FlgF [Hyphomicrobium denitrificans
           ATCC 51888]
 gi|299526437|gb|ADJ24906.1| flagellar basal-body rod protein FlgF [Hyphomicrobium denitrificans
           ATCC 51888]
          Length = 240

 Score = 37.9 bits (86), Expect = 0.52,   Method: Composition-based stats.
 Identities = 15/99 (15%), Positives = 33/99 (33%), Gaps = 3/99 (3%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           N   T    G++          +  + + G     I    +    +F          G V
Sbjct: 139 NKAGTIVQDGNNLGAFGLYRMPQGANLTRGHGASVITDQAAVPEIDFL---RTGVVQGYV 195

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
           +  NVN ++E   +    R + A    ++++   +  +L
Sbjct: 196 EKSNVNPILEMTHLTTLQRSFDAVSNVLRETESSLQDSL 234



 Score = 34.1 bits (76), Expect = 6.0,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 35/83 (42%), Gaps = 7/83 (8%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          + ++ ++  S       R+  ++ N+ANA       G+  YR + +SFEEV+  SG   V
Sbjct: 1  MQSNIYVGLSAQLALQRRLDTVANNVANA-------GTAGYRAEQMSFEEVLSKSGQTAV 53

Query: 64 KKIGVDQSTFVEEFDPGHPVANA 86
            +   ++    E        N 
Sbjct: 54 SFVSQGRTHLSTEGGEITQTDNP 76


>gi|118588710|ref|ZP_01546118.1| Flagellar basal body rod protein [Stappia aggregata IAM 12614]
 gi|118438696|gb|EAV45329.1| Flagellar basal body rod protein [Stappia aggregata IAM 12614]
          Length = 226

 Score = 37.9 bits (86), Expect = 0.52,   Method: Composition-based stats.
 Identities = 11/54 (20%), Positives = 20/54 (37%)

Query: 77  FDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             P   V    G V+  NV  + E   + E  R Y +  + +K   ++    + 
Sbjct: 166 PIPAQEVRMVQGAVEGSNVYGITEVTRLIEVTRAYDSTAKIVKDLDELRQQAIS 219


>gi|83576781|gb|ABC23332.1| conserved hypothetical protein [Rhodospirillum rubrum ATCC 11170]
          Length = 472

 Score = 37.9 bits (86), Expect = 0.52,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 28/65 (43%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  L +S ++A S +  QS+ +  IS N+AN+ T G    +  +           + +G 
Sbjct: 13 MSSLSSSLNVAVSAMNAQSSSVSAISNNLANSSTIGYKTSNASFYSLVTGTGSTSNFTGA 72

Query: 61 VRVKK 65
            V  
Sbjct: 73 GVVAS 77


>gi|332758237|gb|EGJ88560.1| flagellar basal-body rod protein flgF [Shigella flexneri 4343-70]
 gi|332767685|gb|EGJ97878.1| hypothetical protein SF293071_1339 [Shigella flexneri 2930-71]
 gi|333008280|gb|EGK27754.1| flagellar basal-body rod protein flgF [Shigella flexneri K-272]
 gi|333019770|gb|EGK39042.1| flagellar basal-body rod protein flgF [Shigella flexneri K-227]
          Length = 123

 Score = 37.9 bits (86), Expect = 0.53,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 32/102 (31%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           N     +T       +   +    +        +     Q+T          +   SG++
Sbjct: 19  NPGDPANTVAPVGRLKLVKATGSEVQRGDDGIFRLSAETQATRGPVLQADPTLRVMSGVL 78

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NVN +   +DM  + R +   ++ I    D       LL
Sbjct: 79  EGSNVNAVAAMSDMIASARRFEMQMKVISSVDDNAGRANQLL 120


>gi|157961177|ref|YP_001501211.1| flagellar hook-associated protein FlgK [Shewanella pealeana ATCC
           700345]
 gi|157846177|gb|ABV86676.1| flagellar hook-associated protein FlgK [Shewanella pealeana ATCC
           700345]
          Length = 640

 Score = 37.9 bits (86), Expect = 0.53,   Method: Composition-based stats.
 Identities = 16/101 (15%), Positives = 31/101 (30%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           +   +IA +G+    +++ I S NIANA T G                       G  V 
Sbjct: 3   LDLMNIARTGVLASQSQLAITSNNIANANTAGYNRQVVSQSALDSQRMGNDFYGAGTYVS 62

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
            +    + +          A +     +  ++ L +     
Sbjct: 63  DVKRVYNDYATRELRIGSTAVSETQTTFGKMSELDQLFSQI 103



 Score = 34.1 bits (76), Expect = 6.1,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 20/41 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             VN+  E A++    + Y A+ + +  ++++  T    LR
Sbjct: 600 SGVNLDEEAANLMRFQQSYQASARIMTTANEIFNTLFSSLR 640


>gi|326319098|ref|YP_004236770.1| flagellar basal-body rod protein FlgF [Acidovorax avenae subsp.
           avenae ATCC 19860]
 gi|323375934|gb|ADX48203.1| flagellar basal-body rod protein FlgF [Acidovorax avenae subsp.
           avenae ATCC 19860]
          Length = 246

 Score = 37.5 bits (85), Expect = 0.53,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 20/43 (46%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           ++  NVN +     M   +R + A ++ ++ + +   T   LL
Sbjct: 200 LEGSNVNAVESMVGMIAASRQFEAQMRLLQTTENNDKTAAQLL 242


>gi|325923280|ref|ZP_08184953.1| flagellar hook-associated protein FlgK [Xanthomonas gardneri ATCC
          19865]
 gi|325546207|gb|EGD17388.1| flagellar hook-associated protein FlgK [Xanthomonas gardneri ATCC
          19865]
          Length = 624

 Score = 37.5 bits (85), Expect = 0.53,   Method: Composition-based stats.
 Identities = 11/64 (17%), Positives = 23/64 (35%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          ++      S L      +  +S N+AN  T G +     +  +T +         G ++ 
Sbjct: 1  MSIMSTGTSALIAFQRALSTVSHNVANINTEGYSRQRVEFATRTPTDMGYAFVGNGAKIT 60

Query: 65 KIGV 68
           +G 
Sbjct: 61 DVGR 64


>gi|238785496|ref|ZP_04629479.1| Flagellar basal-body rod protein flgF [Yersinia bercovieri ATCC
           43970]
 gi|238713598|gb|EEQ05627.1| Flagellar basal-body rod protein flgF [Yersinia bercovieri ATCC
           43970]
          Length = 251

 Score = 37.5 bits (85), Expect = 0.53,   Method: Composition-based stats.
 Identities = 13/102 (12%), Positives = 29/102 (28%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           NA  + +T       ++  +    +              Q     +      +    G++
Sbjct: 147 NAGDSPNTIAQLGQIKRVRATPGEVMHGDDGLFHLTPATQQARGAQLANDPLIKIMPGVL 206

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NV  +    DM    R +   ++ I    +       LL
Sbjct: 207 EGSNVKAVEAMTDMIANARSFEMQMKIIHSVDENEQRANQLL 248


>gi|75675293|ref|YP_317714.1| hypothetical protein Nwi_1100 [Nitrobacter winogradskyi Nb-255]
 gi|74420163|gb|ABA04362.1| Protein of unknown function DUF1078 [Nitrobacter winogradskyi
           Nb-255]
          Length = 622

 Score = 37.5 bits (85), Expect = 0.53,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 15/45 (33%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
                    VN+  E A++      Y AN   +     MM T + 
Sbjct: 575 QEKFDDKSGVNMDTEMANLIALQNSYAANAHVMTVVQSMMQTLMQ 619



 Score = 37.5 bits (85), Expect = 0.60,   Method: Composition-based stats.
 Identities = 24/88 (27%), Positives = 38/88 (43%), Gaps = 7/88 (7%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            L ++  IA SGL    A + I+S N+ANA T G       Y  +T+  ++V+ G  G 
Sbjct: 1  MSLSSALSIAMSGLRANQAALSIVSGNVANANTPG-------YVAQTLVQDQVVTGGMGS 53

Query: 62 RVKKIGVDQSTFVEEFDPGHPVANASGI 89
           V+ IGV+++                  
Sbjct: 54 GVRVIGVNRTLDAYVQSQLRTENAGGAY 81


>gi|83858797|ref|ZP_00952319.1| flagellar basal body rod protein [Oceanicaulis alexandrii HTCC2633]
 gi|83853620|gb|EAP91472.1| flagellar basal body rod protein [Oceanicaulis alexandrii HTCC2633]
          Length = 138

 Score = 37.5 bits (85), Expect = 0.53,   Method: Composition-based stats.
 Identities = 23/127 (18%), Positives = 46/127 (36%), Gaps = 20/127 (15%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPY--------RRKTISFEEVMHGSGGVRVKKI 66
           +    AR ++I+EN+ANA T G TP   P          ++ +    +          + 
Sbjct: 16  MGYHGARQRVIAENVANANTPGYTPNDIPRSEFERVLAGQQGLGAVGLRTTHAQHYGGET 75

Query: 67  GVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           G   + F  E  P     ++   V   +V +  +  D  E    +         +  +  
Sbjct: 76  GGGSAQFRTERAP-----DSETTVNGNSVVIEEQMVDANENRMRFE-------TALSLYQ 123

Query: 127 TTLDLLR 133
            +L+++R
Sbjct: 124 KSLNMIR 130


>gi|332161323|ref|YP_004297900.1| flagellar basal body rod protein FlgF [Yersinia enterocolitica
           subsp. palearctica 105.5R(r)]
 gi|318605243|emb|CBY26741.1| flagellar basal-body rod protein FlgF [Yersinia enterocolitica
           subsp. palearctica Y11]
 gi|325665553|gb|ADZ42197.1| flagellar basal body rod protein FlgF [Yersinia enterocolitica
           subsp. palearctica 105.5R(r)]
 gi|330860605|emb|CBX70902.1| flagellar basal-body rod protein flgF [Yersinia enterocolitica
           W22703]
          Length = 251

 Score = 37.5 bits (85), Expect = 0.54,   Method: Composition-based stats.
 Identities = 14/102 (13%), Positives = 30/102 (29%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           NA  + +T       ++  +    +              Q     +      +    G++
Sbjct: 147 NAGDSPNTIAQLGQIKRVRATAGEVMHGDDGLFHLTPETQQARGAQLANDPLIKIMPGVL 206

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NV  +   ADM    R +   ++ I    +       LL
Sbjct: 207 EGSNVKAVEAMADMIANARGFEMQMKVIHSVDENEQRANQLL 248


>gi|312962289|ref|ZP_07776780.1| flagellar hook-associated protein FlgK [Pseudomonas fluorescens
          WH6]
 gi|311283216|gb|EFQ61806.1| flagellar hook-associated protein FlgK [Pseudomonas fluorescens
          WH6]
          Length = 678

 Score = 37.5 bits (85), Expect = 0.54,   Method: Composition-based stats.
 Identities = 15/95 (15%), Positives = 31/95 (32%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          ++  +I  SGL      + ++S NIAN  T G +           +    ++   G  + 
Sbjct: 1  MSLLNIGMSGLNAAQGSLSVLSNNIANVNTPGYSRQQTTQNAGASNPYGGVYIGTGTTLA 60

Query: 65 KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
           +    + F+     G    N+           + 
Sbjct: 61 DVRRIYNDFLGAAYQGSTALNSDATTYAGQAAAID 95


>gi|254524155|ref|ZP_05136210.1| flagellar hook-associated protein FlgK [Stenotrophomonas sp. SKA14]
 gi|219721746|gb|EED40271.1| flagellar hook-associated protein FlgK [Stenotrophomonas sp. SKA14]
          Length = 626

 Score = 37.5 bits (85), Expect = 0.54,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 17/39 (43%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
           +   VN+  E ADM    + Y A  Q I  +  M  T L
Sbjct: 583 EVSGVNLDEEAADMLRLQQAYQAASQLISTADSMFQTIL 621


>gi|254460576|ref|ZP_05073992.1| flagellar basal body FlaE domain protein [Rhodobacterales bacterium
           HTCC2083]
 gi|206677165|gb|EDZ41652.1| flagellar basal body FlaE domain protein [Rhodobacteraceae
           bacterium HTCC2083]
          Length = 267

 Score = 37.5 bits (85), Expect = 0.54,   Method: Composition-based stats.
 Identities = 11/80 (13%), Positives = 26/80 (32%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 M   G  R K+        +         +  +G ++  NV++  E   M    
Sbjct: 186 FPNTTAMRQMGMNRFKESRESGELVLGVAGSEGFGSIQTGALESSNVDLTTEMTSMIRAQ 245

Query: 109 RLYMANLQTIKQSHDMMTTT 128
           + +  + + ++   DM+   
Sbjct: 246 QQFSGSSRILQTYTDMIEKL 265


>gi|254994099|ref|ZP_05276289.1| flagellar hook protein FlgE [Listeria monocytogenes FSL J2-064]
          Length = 208

 Score = 37.5 bits (85), Expect = 0.54,   Method: Composition-based stats.
 Identities = 16/93 (17%), Positives = 35/93 (37%), Gaps = 7/93 (7%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +  + + A SG+      + + S NIANA TTG       Y+++++ F ++++ +    V
Sbjct: 1  MNQTMYTAISGMNAFQQALSVTSNNIANANTTG-------YKKQSVVFNDLLYQNTMGSV 53

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVN 96
                 +  +         A  +         
Sbjct: 54 AGGLYAGTNPMSFGSGSKIGAILTDYTAGSPTA 86


>gi|227328344|ref|ZP_03832368.1| flagellar hook-associated protein FlgK [Pectobacterium
          carotovorum subsp. carotovorum WPP14]
          Length = 564

 Score = 37.5 bits (85), Expect = 0.54,   Method: Composition-based stats.
 Identities = 17/96 (17%), Positives = 33/96 (34%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +    + A SGL      +  +S NI+N    G +  +    +   S     +   GV V
Sbjct: 1  MSNLINTAMSGLKGAQVALSTVSNNISNQAVIGYSRQNAILEQAISSSTSAGYIGNGVNV 60

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
            I    + F+          ++S    Y  ++ + 
Sbjct: 61 VSINRQYNEFITNQLRAAQTTSSSVSAYYEQISKID 96


>gi|188586845|ref|YP_001918390.1| flagellar hook-associated protein FlgK [Natranaerobius
          thermophilus JW/NM-WN-LF]
 gi|179351532|gb|ACB85802.1| flagellar hook-associated protein FlgK [Natranaerobius
          thermophilus JW/NM-WN-LF]
          Length = 568

 Score = 37.5 bits (85), Expect = 0.54,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 20/78 (25%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M         A   L  Q   +     NIANA   G T         +       +  G 
Sbjct: 1  MRSTFHGMETAKRALFAQRNALDTTGHNIANAERDGYTRQKAHMSATSPYTMPAQNMPGT 60

Query: 61 VRVKKIGVDQSTFVEEFD 78
                GV+  +     D
Sbjct: 61 AGQIGTGVEVESVERMRD 78



 Score = 34.1 bits (76), Expect = 7.0,   Method: Composition-based stats.
 Identities = 6/38 (15%), Positives = 15/38 (39%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             V++  E   M +    Y A  + +    + + T ++
Sbjct: 524 SGVSMDEEMTKMVQQQHAYNAASRVVTTIDESLDTIIN 561


>gi|153831599|ref|ZP_01984266.1| flagellar basal-body rod protein FlgF [Vibrio harveyi HY01]
 gi|156976142|ref|YP_001447048.1| flagellar basal body rod protein [Vibrio harveyi ATCC BAA-1116]
 gi|148872109|gb|EDL70926.1| flagellar basal-body rod protein FlgF [Vibrio harveyi HY01]
 gi|156527736|gb|ABU72821.1| hypothetical protein VIBHAR_04913 [Vibrio harveyi ATCC BAA-1116]
          Length = 243

 Score = 37.5 bits (85), Expect = 0.54,   Method: Composition-based stats.
 Identities = 8/56 (14%), Positives = 21/56 (37%)

Query: 77  FDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           F     V  +   ++  NV+ + E   +    R +   ++ +K +  +      L+
Sbjct: 185 FPADETVQLSPEHIEGSNVSAIDELLSVMSLTRNFEMQVRMMKTAETLAQAGNKLM 240


>gi|291613044|ref|YP_003523201.1| flagellar hook-associated protein FlgK [Sideroxydans
          lithotrophicus ES-1]
 gi|291583156|gb|ADE10814.1| flagellar hook-associated protein FlgK [Sideroxydans
          lithotrophicus ES-1]
          Length = 640

 Score = 37.5 bits (85), Expect = 0.55,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 24/69 (34%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          ++   IA S L    A +   S NIANA T G +  +              +   GV V 
Sbjct: 1  MSIYGIAVSALNAAQAGLTTTSNNIANANTPGYSRQAIIQAGMLPQNTGSGYFGQGVNVT 60

Query: 65 KIGVDQSTF 73
           +      F
Sbjct: 61 TVVRRYDQF 69


>gi|237751806|ref|ZP_04582286.1| flagellar distal rod protein FlgG [Helicobacter bilis ATCC 43879]
 gi|229373172|gb|EEO23563.1| flagellar distal rod protein FlgG [Helicobacter bilis ATCC 43879]
          Length = 285

 Score = 37.5 bits (85), Expect = 0.55,   Method: Composition-based stats.
 Identities = 20/106 (18%), Positives = 39/106 (36%), Gaps = 6/106 (5%)

Query: 26  SENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVAN 85
           ++NIA       T  +  + +K      +            G+  +  V      +  A 
Sbjct: 179 ADNIAGGSLAIVTFDNPKFLKKIGGSLYIEERKEPDNTDSEGLAGANLV-----YNSGAV 233

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS-HDMMTTTLD 130
             G ++  NVN ++E   M ETNRL     + +K    ++    ++
Sbjct: 234 TQGFLEKSNVNAVLEMTGMIETNRLVDMYSRVMKTHMDELNAEAIN 279


>gi|20086976|gb|AAM10736.1| flagella-associated protein K [Leptospira interrogans serovar
          lai]
          Length = 543

 Score = 37.5 bits (85), Expect = 0.55,   Method: Composition-based stats.
 Identities = 9/59 (15%), Positives = 17/59 (28%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
          M    +   I   GL      +Q    NI+NA                  ++  ++ + 
Sbjct: 1  MGSTFSGLEIGKRGLTAHQQALQTTGHNISNADNKHYARQRVTMTAMDPLYDPSLNRAN 59


>gi|107023946|ref|YP_622273.1| flagellar hook-associated protein FlgK [Burkholderia cenocepacia AU
           1054]
 gi|116691033|ref|YP_836656.1| flagellar hook-associated protein FlgK [Burkholderia cenocepacia
           HI2424]
 gi|170734367|ref|YP_001766314.1| flagellar hook-associated protein FlgK [Burkholderia cenocepacia
           MC0-3]
 gi|105894135|gb|ABF77300.1| Flagellar hook-associated protein [Burkholderia cenocepacia AU
           1054]
 gi|116649122|gb|ABK09763.1| flagellar hook-associated protein FlgK [Burkholderia cenocepacia
           HI2424]
 gi|169817609|gb|ACA92192.1| flagellar hook-associated protein FlgK [Burkholderia cenocepacia
           MC0-3]
          Length = 643

 Score = 37.5 bits (85), Expect = 0.55,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 20/39 (51%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN   E A++ +  +LY AN + I+ +  +  T L L
Sbjct: 603 SGVNQNEEAANLMQYQQLYQANAKVIQTASTLFQTVLGL 641


>gi|15596278|ref|NP_249772.1| flagellar basal body rod protein FlgF [Pseudomonas aeruginosa PAO1]
 gi|107100526|ref|ZP_01364444.1| hypothetical protein PaerPA_01001551 [Pseudomonas aeruginosa PACS2]
 gi|116049010|ref|YP_792188.1| flagellar basal body rod protein FlgF [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|218892955|ref|YP_002441824.1| flagellar basal body rod protein FlgF [Pseudomonas aeruginosa
           LESB58]
 gi|254234217|ref|ZP_04927540.1| flagellar basal-body rod protein FlgF [Pseudomonas aeruginosa
           C3719]
 gi|254239439|ref|ZP_04932761.1| flagellar basal-body rod protein FlgF [Pseudomonas aeruginosa 2192]
 gi|296390555|ref|ZP_06880030.1| flagellar basal body rod protein FlgF [Pseudomonas aeruginosa PAb1]
 gi|313106036|ref|ZP_07792295.1| flagellar basal-body rod protein FlgF [Pseudomonas aeruginosa
           39016]
 gi|9946997|gb|AAG04470.1|AE004539_12 flagellar basal-body rod protein FlgF [Pseudomonas aeruginosa PAO1]
 gi|115584231|gb|ABJ10246.1| flagellar basal-body rod protein FlgF [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|126166148|gb|EAZ51659.1| flagellar basal-body rod protein FlgF [Pseudomonas aeruginosa
           C3719]
 gi|126192817|gb|EAZ56880.1| flagellar basal-body rod protein FlgF [Pseudomonas aeruginosa 2192]
 gi|218773183|emb|CAW28995.1| flagellar basal-body rod protein FlgF [Pseudomonas aeruginosa
           LESB58]
 gi|310878797|gb|EFQ37391.1| flagellar basal-body rod protein FlgF [Pseudomonas aeruginosa
           39016]
          Length = 249

 Score = 37.5 bits (85), Expect = 0.55,   Method: Composition-based stats.
 Identities = 12/92 (13%), Positives = 29/92 (31%)

Query: 32  ARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVK 91
            R  G+ P       +       +          +        +       V   SG ++
Sbjct: 146 IRALGENPNVVAVVDRIKLVNPNLKQMEKGTDGLLHYKPQPGEQAPLADANVKVVSGFLE 205

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
             NVN + E   +   +R +  +++ ++ + D
Sbjct: 206 SSNVNAVEEMTAILSLSRQFELHVKMMRTAED 237


>gi|307131603|ref|YP_003883619.1| flagellar hook-associated protein flgK [Dickeya dadantii 3937]
 gi|306529132|gb|ADM99062.1| Flagellar hook-associated protein flgK [Dickeya dadantii 3937]
          Length = 640

 Score = 37.5 bits (85), Expect = 0.55,   Method: Composition-based stats.
 Identities = 16/74 (21%), Positives = 30/74 (40%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +    +   SGL+   A +  +S NI+N   TG +  +    +   +     +   GV V
Sbjct: 1  MSNLINTGMSGLSAAQAALSTVSNNISNQAVTGYSRQNALLAQNNGTNISAGYIGNGVTV 60

Query: 64 KKIGVDQSTFVEEF 77
            I  D + F+ + 
Sbjct: 61 VSINRDYNDFIAKQ 74



 Score = 35.2 bits (79), Expect = 3.4,   Method: Composition-based stats.
 Identities = 21/127 (16%), Positives = 41/127 (32%), Gaps = 5/127 (3%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
             S+ IA +G+++ S    +     A A     T      +         + G  G +  
Sbjct: 517 TDSSKIAAAGVSLTSTGGGVSDNTNAKALLNLQTTKVVENKSSVSQAYASLVGDIGNKTS 576

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
              V  ++             +        VN+  E  D+    + YMAN + I+ +  +
Sbjct: 577 TAKVTDTSQKNVVSQLTTEQQS-----VSGVNLDEEYGDLVRFQQYYMANAKVIQTASTI 631

Query: 125 MTTTLDL 131
               L +
Sbjct: 632 FDALLAI 638


>gi|317133463|ref|YP_004092777.1| flagellar hook-associated protein FlgK [Ethanoligenens harbinense
           YUAN-3]
 gi|315471442|gb|ADU28046.1| flagellar hook-associated protein FlgK [Ethanoligenens harbinense
           YUAN-3]
          Length = 548

 Score = 37.5 bits (85), Expect = 0.55,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 24/41 (58%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            +V++  ET ++ +  ++Y A+ + I   +DMM T L + +
Sbjct: 508 SSVSIDEETVNLMKFQQMYGASARVITTINDMMGTLLSMAQ 548



 Score = 36.8 bits (83), Expect = 0.96,   Method: Composition-based stats.
 Identities = 12/38 (31%), Positives = 19/38 (50%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDT 38
          M  L    + A SGL+     + + + NI+NA T G +
Sbjct: 1  MASLNTGLNTALSGLSASQTALGVTAHNISNAATDGYS 38


>gi|238751763|ref|ZP_04613251.1| Flagellar basal-body rod protein flgF [Yersinia rohdei ATCC 43380]
 gi|238710034|gb|EEQ02264.1| Flagellar basal-body rod protein flgF [Yersinia rohdei ATCC 43380]
          Length = 251

 Score = 37.5 bits (85), Expect = 0.55,   Method: Composition-based stats.
 Identities = 14/102 (13%), Positives = 30/102 (29%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           NA  + +T       ++  +    +              Q     +      V    G++
Sbjct: 147 NAGDSPNTIAQLGQIKRVKATAGEVMHGDDGLFHLTAATQQARGAQLANDPLVKIMPGVL 206

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NV  +   +DM    R +   ++ I    +       LL
Sbjct: 207 EGSNVKAVEAMSDMIANARSFEMQMKVIHSVDENEQRANQLL 248


>gi|254516990|ref|ZP_05129048.1| flagellar basal-body rod protein FlgF [gamma proteobacterium
           NOR5-3]
 gi|219674495|gb|EED30863.1| flagellar basal-body rod protein FlgF [gamma proteobacterium
           NOR5-3]
          Length = 249

 Score = 37.5 bits (85), Expect = 0.55,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 26/49 (53%)

Query: 85  NASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             SG ++  NVN +     M E +R +   ++ +K + D+ T++  L+R
Sbjct: 198 MVSGALESSNVNPVTAMVRMIELSRQFEHYVKLMKVAEDVDTSSASLMR 246


>gi|254227984|ref|ZP_04921414.1| flagellar basal-body rod protein FlgF [Vibrio sp. Ex25]
 gi|262396034|ref|YP_003287887.1| flagellar basal-body rod protein FlgF [Vibrio sp. Ex25]
 gi|151939480|gb|EDN58308.1| flagellar basal-body rod protein FlgF [Vibrio sp. Ex25]
 gi|262339628|gb|ACY53422.1| flagellar basal-body rod protein FlgF [Vibrio sp. Ex25]
          Length = 243

 Score = 37.5 bits (85), Expect = 0.55,   Method: Composition-based stats.
 Identities = 6/47 (12%), Positives = 19/47 (40%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +   ++  NV+ + E   +    R +   ++ +K +  +      L+
Sbjct: 194 SPEHIEGSNVSAIDELISVMSLTRNFEMQVRMMKTAETLAQAGNKLM 240


>gi|219670203|ref|YP_002460638.1| flagellar hook-associated protein FlgK [Desulfitobacterium
          hafniense DCB-2]
 gi|219540463|gb|ACL22202.1| flagellar hook-associated protein FlgK [Desulfitobacterium
          hafniense DCB-2]
          Length = 583

 Score = 37.5 bits (85), Expect = 0.55,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 21/77 (27%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M    +   +A   L  Q   +     NIANA T G T      +  +      M     
Sbjct: 1  MRSTFSGLELARRALESQQIALDTTGHNIANANTIGYTRQVVNLQATSPDSIPGMGHYLS 60

Query: 61 VRVKKIGVDQSTFVEEF 77
          +             + F
Sbjct: 61 IGTGVTVQSIERARDIF 77



 Score = 33.7 bits (75), Expect = 9.0,   Method: Composition-based stats.
 Identities = 7/37 (18%), Positives = 17/37 (45%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            VN+  E  ++ +  + Y A  + +     M+ T ++
Sbjct: 541 GVNMDEEITNLIKFQKSYTAAARIVTMLDSMLDTIVN 577


>gi|327478815|gb|AEA82125.1| flagellar hook-associated protein FlgK [Pseudomonas stutzeri DSM
           4166]
          Length = 459

 Score = 37.5 bits (85), Expect = 0.56,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 19/39 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN+  E  ++    + Y AN++ I  S+D+    L +
Sbjct: 420 SAVNLDEEAVNLMAYEQAYQANMKVISTSNDLFNAVLAM 458


>gi|297618069|ref|YP_003703228.1| flagellar hook-associated protein FlgK [Syntrophothermus
          lipocalidus DSM 12680]
 gi|297145906|gb|ADI02663.1| flagellar hook-associated protein FlgK [Syntrophothermus
          lipocalidus DSM 12680]
          Length = 618

 Score = 37.5 bits (85), Expect = 0.56,   Method: Composition-based stats.
 Identities = 13/75 (17%), Positives = 21/75 (28%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  +     I    +  Q   + +   N+ANA T G +                +  +  
Sbjct: 1  MRSMFLGLEIGRRAIMTQQTALDVTGHNVANANTEGYSRQVAVMVTTPAYHSPALTQNLS 60

Query: 61 VRVKKIGVDQSTFVE 75
          V     GV  S    
Sbjct: 61 VGQIGTGVKVSEIRR 75


>gi|222147565|ref|YP_002548522.1| flagellar basal body rod protein FlgF [Agrobacterium vitis S4]
 gi|221734553|gb|ACM35516.1| flagellar basal body rod protein [Agrobacterium vitis S4]
          Length = 244

 Score = 37.5 bits (85), Expect = 0.56,   Method: Composition-based stats.
 Identities = 15/102 (14%), Positives = 33/102 (32%), Gaps = 1/102 (0%)

Query: 34  TTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
               T   +  +   I         G +R +  GV  +   +       +    G V+  
Sbjct: 142 GADGTINQNGRQISQIGLFTADISKGYLRTENSGVITTDRPQAVVDDATIGVMQGYVEQS 201

Query: 94  NVNVLVETADMRETNRLYMA-NLQTIKQSHDMMTTTLDLLRD 134
           NVN + +   + + +R + + +    +  + M  T   L   
Sbjct: 202 NVNGISQMTQLIQVSRAFESISASMSQTENSMSETIKTLGGS 243


>gi|238923132|ref|YP_002936645.1| flagellar basal body and hook protein [Eubacterium rectale ATCC
          33656]
 gi|238874804|gb|ACR74511.1| flagellar basal body and hook protein [Eubacterium rectale ATCC
          33656]
 gi|291523979|emb|CBK89566.1| fagellar hook-basal body proteins [Eubacterium rectale DSM 17629]
          Length = 266

 Score = 37.5 bits (85), Expect = 0.57,   Method: Composition-based stats.
 Identities = 9/40 (22%), Positives = 21/40 (52%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDP 43
          ++   + A++G+  +  RM +++ N+AN+ T G       
Sbjct: 1  MVKGLYTAHTGMVNEMKRMDVLANNLANSDTYGFKKEGTT 40



 Score = 36.0 bits (81), Expect = 1.6,   Method: Composition-based stats.
 Identities = 11/50 (22%), Positives = 20/50 (40%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
                  G ++  NVNV+ E  +M    R Y A  + I    + +   ++
Sbjct: 212 SDAEIEQGALETSNVNVVNEMVNMITIQRAYEAGQKVITSIDETLDKAVN 261


>gi|194365674|ref|YP_002028284.1| flagellar hook-associated protein FlgK [Stenotrophomonas
           maltophilia R551-3]
 gi|194348478|gb|ACF51601.1| flagellar hook-associated protein FlgK [Stenotrophomonas
           maltophilia R551-3]
          Length = 626

 Score = 37.5 bits (85), Expect = 0.57,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 17/39 (43%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
           +   VN+  E ADM    + Y A  Q I  +  M  T L
Sbjct: 583 EVSGVNLDEEAADMLRLQQAYQAASQLISTADSMFQTIL 621



 Score = 33.7 bits (75), Expect = 9.5,   Method: Composition-based stats.
 Identities = 16/104 (15%), Positives = 27/104 (25%), Gaps = 7/104 (6%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           + +        L      +   S N+AN  T G       Y R+ ++F      + G   
Sbjct: 1   MSSVLSTGTGALLAFQRALATTSHNVANLNTPG-------YSRQKVNFATADPQNYGYGT 53

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
              G   +      D            +   +  L   AD    
Sbjct: 54  VGNGTRITDIRRTADQLAISRLLDSSGELARLKQLSSMADRVNA 97


>gi|49089306|gb|AAT51668.1| PA1081 [synthetic construct]
          Length = 250

 Score = 37.5 bits (85), Expect = 0.57,   Method: Composition-based stats.
 Identities = 12/92 (13%), Positives = 29/92 (31%)

Query: 32  ARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVK 91
            R  G+ P       +       +          +        +       V   SG ++
Sbjct: 146 IRALGENPNVVAVVDRIKLVNPNLKQMEKGTDGLLHYKPQPGEQAPLADANVKVVSGFLE 205

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
             NVN + E   +   +R +  +++ ++ + D
Sbjct: 206 SSNVNAVEEMTAILSLSRQFELHVKMMRTAED 237


>gi|74101659|gb|AAZ99749.1| FlgFL [Aeromonas hydrophila]
          Length = 244

 Score = 37.5 bits (85), Expect = 0.57,   Method: Composition-based stats.
 Identities = 9/37 (24%), Positives = 17/37 (45%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
           SG ++  NVN + E        R +   ++ +K + D
Sbjct: 195 SGFLEGANVNAVDELISSMSLTRNFELQVKLMKTADD 231


>gi|283833629|ref|ZP_06353370.1| flagellar basal-body rod protein FlgF [Citrobacter youngae ATCC
           29220]
 gi|291071312|gb|EFE09421.1| flagellar basal-body rod protein FlgF [Citrobacter youngae ATCC
           29220]
          Length = 251

 Score = 37.5 bits (85), Expect = 0.57,   Method: Composition-based stats.
 Identities = 15/102 (14%), Positives = 30/102 (29%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           N     +T       +   +    +        +     Q+T          +   SG++
Sbjct: 147 NPGDPANTVAPVGRLKLVKATGSEVQRGDDGMFRLSAAAQATRGPTLQADPSIRVMSGVL 206

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NV  +   +DM    R +   ++ I    D       LL
Sbjct: 207 EGSNVKPVAAMSDMIANARRFEMQMKIISSVDDNAGRANQLL 248


>gi|227112527|ref|ZP_03826183.1| flagellar hook-associated protein FlgK [Pectobacterium
          carotovorum subsp. brasiliensis PBR1692]
          Length = 564

 Score = 37.5 bits (85), Expect = 0.57,   Method: Composition-based stats.
 Identities = 18/96 (18%), Positives = 34/96 (35%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +    + A SGL      +  +S NI+N   TG +  +    +   S     +   GV V
Sbjct: 1  MSNLINTAMSGLKGAQVALSTVSNNISNQAVTGYSRQNAILEQAISSSTSAGYIGNGVNV 60

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
            I    + F+          ++S    Y  ++ + 
Sbjct: 61 VSINRQYNEFITNQLRAAQTTSSSVSAYYEQISKID 96


>gi|220927554|ref|YP_002504463.1| flagellar hook-associated protein FlgK [Clostridium cellulolyticum
           H10]
 gi|219997882|gb|ACL74483.1| flagellar hook-associated protein FlgK [Clostridium cellulolyticum
           H10]
          Length = 537

 Score = 37.5 bits (85), Expect = 0.58,   Method: Composition-based stats.
 Identities = 18/106 (16%), Positives = 31/106 (29%), Gaps = 5/106 (4%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M       +IA SGL      +  +  N++NA T G +      ++   S    +    G
Sbjct: 1   MQQSFFGLNIALSGLYTAQRNLDTVGHNLSNASTPGYS-----RQQSIQSASNPLAVMDG 55

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
             +   G   +      D        S  V     +   E     +
Sbjct: 56  TGMVGTGSQVTGVERIRDTYLDFKYWSENVANGEWSKKAELMGEIQ 101


>gi|332981428|ref|YP_004462869.1| flagellar basal-body rod protein FlgB [Mahella australiensis 50-1
           BON]
 gi|332699106|gb|AEE96047.1| flagellar basal-body rod protein FlgB [Mahella australiensis 50-1
           BON]
          Length = 137

 Score = 37.5 bits (85), Expect = 0.58,   Method: Composition-based stats.
 Identities = 24/127 (18%), Positives = 51/127 (40%), Gaps = 1/127 (0%)

Query: 8   AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR-RKTISFEEVMHGSGGVRVKKI 66
             + +  L     R Q+IS+N+AN  T G       +      + ++         +K I
Sbjct: 11  IGVLSKALDGLWMRNQVISDNVANVDTPGFKASKVAFEDVLKGALDDNALKGKVTNIKHI 70

Query: 67  GVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
            +   +  +         N S  +   NV++ +E AD+ +T   Y A +Q + +   M+ 
Sbjct: 71  PIGALSAKDVQPQVLQSQNTSMRMDGNNVDIDLEMADLAKTTIAYNAVIQKMTKEFQMLR 130

Query: 127 TTLDLLR 133
           + ++  +
Sbjct: 131 SAINGGK 137


>gi|322492867|emb|CBZ28146.1| putative calpain-like cysteine peptidase [Leishmania mexicana
            MHOM/GT/2001/U1103]
          Length = 4341

 Score = 37.5 bits (85), Expect = 0.58,   Method: Composition-based stats.
 Identities = 20/98 (20%), Positives = 32/98 (32%), Gaps = 6/98 (6%)

Query: 15   LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFV 74
            L+ Q A+++ I++NIA          S    R      + +          +  D     
Sbjct: 1320 LSAQEAKLRSIADNIA--DELLHIDLSFIDTRPEGIPRDAIPMISDEAFAGMMTDLLRLR 1377

Query: 75   EEFDPGHPVANASGIVKYPNVNVLVETADMR-ETNRLY 111
               +     A+A   V+Y  V    E A    E  R Y
Sbjct: 1378 RRPE---SNASAIRDVEYRLVKRATEMARSMHEAERTY 1412


>gi|3493240|gb|AAC33326.1| hook associated protein I homolog [Caulobacter crescentus CB15]
          Length = 397

 Score = 37.5 bits (85), Expect = 0.58,   Method: Composition-based stats.
 Identities = 24/102 (23%), Positives = 38/102 (37%), Gaps = 9/102 (8%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             L A    A SG+      +++ S+NIAN  TTG       Y RKT+S   ++    GV
Sbjct: 1   MSLNAIMSTATSGMMAAQTGLRVTSDNIANVNTTG-------YVRKTVSQSNLLSNGMGV 53

Query: 62  RV--KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVET 101
            V    I      F++         +    +    +N   + 
Sbjct: 54  GVNIDAIKRATDQFLQSASLNAASESGRASIVASTLNSAQQL 95


>gi|82702454|ref|YP_412020.1| flagellar basal body rod protein FlgF [Nitrosospira multiformis
           ATCC 25196]
 gi|82410519|gb|ABB74628.1| conserved hypothetical protein [Nitrosospira multiformis ATCC
           25196]
          Length = 250

 Score = 37.5 bits (85), Expect = 0.58,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 20/43 (46%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           ++  NVNV+    DM   +R +  +++ ++ +         LL
Sbjct: 204 LEGSNVNVVEAMVDMISLSRQFETHMKLLQNAEGNAQRASQLL 246


>gi|7514872|pir||S61455 flagellar hook protein flgE - Helicobacter mustelae  (fragment)
          Length = 454

 Score = 37.5 bits (85), Expect = 0.58,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 17/41 (41%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          ++ S     SG+      + + S NIAN  TTG       +
Sbjct: 1  MLRSLWSGVSGMQAHQVALDVESNNIANVNTTGFKYSRATF 41


>gi|145297455|ref|YP_001140296.1| lateral flagellar basal-body rod protein LfgF [Aeromonas
           salmonicida subsp. salmonicida A449]
 gi|142850227|gb|ABO88548.1| lateral flagellar basal-body rod protein LfgF [Aeromonas
           salmonicida subsp. salmonicida A449]
          Length = 236

 Score = 37.5 bits (85), Expect = 0.59,   Method: Composition-based stats.
 Identities = 9/37 (24%), Positives = 17/37 (45%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
           SG ++  NVN + E        R +   ++ +K + D
Sbjct: 187 SGFLEGANVNAVDELISSMSLTRNFELQVKLMKTADD 223


>gi|87307400|ref|ZP_01089545.1| flagellar hook protein FlgE [Blastopirellula marina DSM 3645]
 gi|87290140|gb|EAQ82029.1| flagellar hook protein FlgE [Blastopirellula marina DSM 3645]
          Length = 929

 Score = 37.5 bits (85), Expect = 0.59,   Method: Composition-based stats.
 Identities = 9/86 (10%), Positives = 25/86 (29%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
             +    +   G                +       +  +G V+  N ++     D+   
Sbjct: 844 RFANPSGLEQRGNNLFAAGVNSGLPVQGDAGEEGIGSIIAGAVELSNTDIGGNLIDLILA 903

Query: 108 NRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  Y  + + I  +  +    L++ R
Sbjct: 904 STQYRGSSRIITTAQQLFDELLNIRR 929


>gi|206558976|ref|YP_002229736.1| flagellar hook-associated protein FlgK [Burkholderia cenocepacia
           J2315]
 gi|198035013|emb|CAR50885.1| flagellar hook-associated protein 1 (HAP1) [Burkholderia
           cenocepacia J2315]
          Length = 643

 Score = 37.5 bits (85), Expect = 0.59,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 20/39 (51%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN   E A++ +  +LY AN + I+ +  +  T L L
Sbjct: 603 SGVNQNEEAANLMQYQQLYQANAKVIQTASTLFQTVLGL 641


>gi|148256791|ref|YP_001241376.1| flagellar basal body rod protein FlgF [Bradyrhizobium sp. BTAi1]
 gi|146408964|gb|ABQ37470.1| putative flagellar basal-body rod protein (flgF or flgG)
           [Bradyrhizobium sp. BTAi1]
          Length = 254

 Score = 37.5 bits (85), Expect = 0.59,   Method: Composition-based stats.
 Identities = 11/54 (20%), Positives = 20/54 (37%)

Query: 77  FDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             P        G ++  NV+ + E + M E  R Y      ++   DM    ++
Sbjct: 194 PQPDTKSTVQQGYIEKSNVSAVGEMSRMVEVMRSYTQVANMLQVQSDMRKNAIE 247


>gi|292487940|ref|YP_003530815.1| flagellar basal-body rod protein FlgF [Erwinia amylovora CFBP1430]
 gi|292899159|ref|YP_003538528.1| flagellar basal-body rod protein FlgF [Erwinia amylovora ATCC
           49946]
 gi|291199007|emb|CBJ46118.1| flagellar basal-body rod protein FlgF (proximal rod protein)
           [Erwinia amylovora ATCC 49946]
 gi|291553362|emb|CBA20407.1| Flagellar basal-body rod protein flgF [Erwinia amylovora CFBP1430]
 gi|312172061|emb|CBX80318.1| Flagellar basal-body rod protein flgF [Erwinia amylovora ATCC
           BAA-2158]
          Length = 251

 Score = 37.5 bits (85), Expect = 0.60,   Method: Composition-based stats.
 Identities = 9/47 (19%), Positives = 16/47 (34%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
             G+++  NV       DM    R +   ++ I    +       LL
Sbjct: 202 MPGVLEGSNVKATQTMVDMIANARRFEMQMKVISSVDENEQKANQLL 248


>gi|254470337|ref|ZP_05083741.1| flagellar hook-associated protein, putative [Pseudovibrio sp.
           JE062]
 gi|211960648|gb|EEA95844.1| flagellar hook-associated protein, putative [Pseudovibrio sp.
           JE062]
          Length = 519

 Score = 37.5 bits (85), Expect = 0.60,   Method: Composition-based stats.
 Identities = 15/99 (15%), Positives = 31/99 (31%), Gaps = 1/99 (1%)

Query: 34  TTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
               +P S    +       + +      VK+  +  +    E +     + A    +  
Sbjct: 420 EFTFSPSSGVGAKNAPYVGTISNFGIETVVKQSQIASAATSAESNSKAVTSIAKNAYENS 479

Query: 94  -NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             V+V  E   + E    Y AN + +    +M  T   +
Sbjct: 480 YKVDVDEELVKLTELQNAYAANARVLSAIDEMYDTLFRI 518


>gi|74317651|ref|YP_315391.1| flagellar basal body rod protein FlgF [Thiobacillus denitrificans
           ATCC 25259]
 gi|74057146|gb|AAZ97586.1| flagellar basal body rod protein FlgF [Thiobacillus denitrificans
           ATCC 25259]
          Length = 246

 Score = 37.5 bits (85), Expect = 0.60,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 24/49 (48%)

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           A   G ++  NVNV+ E  +M    R +  +++ ++ + +  +    LL
Sbjct: 195 ALIGGALESSNVNVVDEMVNMISLARQFDMHMKLLQHAENNDSKAAQLL 243


>gi|330501138|ref|YP_004378007.1| flagellar basal-body rod protein FlgF [Pseudomonas mendocina NK-01]
 gi|328915424|gb|AEB56255.1| flagellar basal-body rod protein FlgF [Pseudomonas mendocina NK-01]
          Length = 243

 Score = 37.5 bits (85), Expect = 0.61,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 22/47 (46%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG ++  NV  + +       NRL+   ++ +K + D+      ++R
Sbjct: 195 SGYLEASNVGAIDQLVATMSLNRLFETQVKMMKAAEDLSDAGNRMIR 241


>gi|254562217|ref|YP_003069312.1| flagellar basal-body rod protein flgF [Methylobacterium extorquens
           DM4]
 gi|254269495|emb|CAX25461.1| flagellar basal-body rod protein flgF [Methylobacterium extorquens
           DM4]
          Length = 246

 Score = 37.5 bits (85), Expect = 0.61,   Method: Composition-based stats.
 Identities = 18/108 (16%), Positives = 36/108 (33%), Gaps = 1/108 (0%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +  +  +  S     +  + +I+ N+AN  TTG    S  ++   +            R 
Sbjct: 1   MQNALFVGVSAQTALARELDVIANNMANVSTTGFKARSARFQEYLMPVASADSFQRSDRR 60

Query: 64  KKIGVDQ-STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRL 110
               +DQ +       P  P +N   +    +  + V+T       R 
Sbjct: 61  LSYVIDQGTPLDLTQGPVEPDSNPMHVALRGDAFLAVQTPQGLRYTRN 108



 Score = 36.8 bits (83), Expect = 1.1,   Method: Composition-based stats.
 Identities = 20/102 (19%), Positives = 29/102 (28%), Gaps = 6/102 (5%)

Query: 29  IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASG 88
           IA   T     G     R           S G  +                G  V    G
Sbjct: 145 IAPDGTISTNLGIRGRLRLVTFANAQALKSEGANLFSSEAPARPA------GAGVHLEPG 198

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            ++  NV  +VE   + + NR Y      I +  D+  T + 
Sbjct: 199 ALERSNVKPVVEMTRLMDVNRTYSMVSSVISRLDDLRGTAIR 240


>gi|281418802|ref|ZP_06249821.1| flagellar hook-associated protein FlgK [Clostridium thermocellum
           JW20]
 gi|281407886|gb|EFB38145.1| flagellar hook-associated protein FlgK [Clostridium thermocellum
           JW20]
          Length = 489

 Score = 37.5 bits (85), Expect = 0.61,   Method: Composition-based stats.
 Identities = 18/110 (16%), Positives = 37/110 (33%), Gaps = 10/110 (9%)

Query: 23  QIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHP 82
             I+  IAN R               +S    +       +  +G   S   +  +    
Sbjct: 381 NTIALAIANLRDNRVIAD--------VSGMVSLDDYYQTIILIVGTGGSEAKKTAENQRT 432

Query: 83  VANASGIVKYP--NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           + N++   +     V++  E ++M      Y A+ + I    DM+ T + 
Sbjct: 433 LVNSAEAQRQSVMGVSMDEEMSNMMRYKFAYSASSRAINVIDDMLETIIT 482



 Score = 33.7 bits (75), Expect = 9.5,   Method: Composition-based stats.
 Identities = 12/64 (18%), Positives = 19/64 (29%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           A   IA SG+ V    + +   N+AN  T G                       G  ++
Sbjct: 3  FAGLEIARSGMYVNERALSVTGHNVANVNTKGYARQQAMITTGPYLNLMRYQIGLGASIQ 62

Query: 65 KIGV 68
          +   
Sbjct: 63 ETRQ 66


>gi|187918168|ref|YP_001883731.1| flagellar basal body rod protein FlgB [Borrelia hermsii DAH]
 gi|119861016|gb|AAX16811.1| flagellar basal-body rod protein FlgB [Borrelia hermsii DAH]
          Length = 135

 Score = 37.5 bits (85), Expect = 0.61,   Method: Composition-based stats.
 Identities = 20/117 (17%), Positives = 39/117 (33%), Gaps = 5/117 (4%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M+    S  +A+  L V S R  +I++NIAN  T         +  +          S  
Sbjct: 1   MNIFEMSVDLAHRYLDVLSLRQSVIADNIANVDTPNFKRSKVTFEAELERAILNERASNL 60

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIV-----KYPNVNVLVETADMRETNRLYM 112
             ++      + F E        +     +        NV++  E  ++ +   +Y 
Sbjct: 61  SLIRGNDKHLNGFKELGYLDVKPSRMLDYLSILKNDGNNVDIDSEMKNLIQNQMIYS 117


>gi|70729005|ref|YP_258739.1| flagellar basal body rod protein FlgF [Pseudomonas fluorescens
           Pf-5]
 gi|68343304|gb|AAY90910.1| flagellar basal-body rod protein FlgF [Pseudomonas fluorescens
           Pf-5]
          Length = 246

 Score = 37.5 bits (85), Expect = 0.61,   Method: Composition-based stats.
 Identities = 8/47 (17%), Positives = 22/47 (46%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG ++  NVN + E   +   +R +  +++ +  + +       +L+
Sbjct: 198 SGFLESSNVNAVEEMTAVLALSRQFELHVKMMNSAKEDDQAMARVLQ 244


>gi|310644334|ref|YP_003949093.1| flagellar hook-associated protein flgk [Paenibacillus polymyxa SC2]
 gi|309249285|gb|ADO58852.1| Flagellar hook-associated protein FlgK [Paenibacillus polymyxa SC2]
          Length = 522

 Score = 37.5 bits (85), Expect = 0.62,   Method: Composition-based stats.
 Identities = 5/38 (13%), Positives = 16/38 (42%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             V++  E ++M +    Y A  + +     ++   ++
Sbjct: 478 SGVSLDEEMSNMIKFQHAYSAAARFMTTFDQLLDKLIN 515


>gi|301166803|emb|CBW26380.1| putative flagellar hook protein [Bacteriovorax marinus SJ]
          Length = 414

 Score = 37.5 bits (85), Expect = 0.62,   Method: Composition-based stats.
 Identities = 8/46 (17%), Positives = 21/46 (45%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            +  ++  NV++     DM +T + + AN + +     ++   + L
Sbjct: 368 RTNAIEQSNVDITNNFVDMMKTQKSFSANSEAMSAIDGLLKNVIAL 413


>gi|260893878|ref|YP_003239975.1| flagellar basal-body rod protein FlgB [Ammonifex degensii KC4]
 gi|260866019|gb|ACX53125.1| flagellar basal-body rod protein FlgB [Ammonifex degensii KC4]
          Length = 133

 Score = 37.5 bits (85), Expect = 0.62,   Method: Composition-based stats.
 Identities = 17/103 (16%), Positives = 37/103 (35%), Gaps = 9/103 (8%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPY----RRKTISFEEVMHGSGGVRVKKIGVDQ 70
           L   + R ++I++N+AN  T G   G   +    +R   +   +           + +++
Sbjct: 16  LDAAALRQRVIADNLANVDTPGFKKGVVRFEEELKRALNAPLPLRTTDPRHFPSPVPLEK 75

Query: 71  STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
            +   E D    +          NV+V  +  ++      Y A
Sbjct: 76  VSPRVERDYFTSMRADGN-----NVDVDEQMVNLVVNALFYHA 113


>gi|226939368|ref|YP_002794441.1| FlgK [Laribacter hongkongensis HLHK9]
 gi|226714294|gb|ACO73432.1| FlgK [Laribacter hongkongensis HLHK9]
          Length = 610

 Score = 37.5 bits (85), Expect = 0.62,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 25/62 (40%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          ++  +I  +GL    A +   S+N++N  T G    +           +  +   GVRV 
Sbjct: 1  MSLLNIGVTGLNAARAALTTTSQNVSNVNTAGYHRKAVNQSALYYGPGQFGNTGNGVRVD 60

Query: 65 KI 66
           I
Sbjct: 61 DI 62


>gi|332161328|ref|YP_004297905.1| flagellar hook-associated protein FlgK [Yersinia enterocolitica
           subsp. palearctica 105.5R(r)]
 gi|318605248|emb|CBY26746.1| flagellar hook-associated protein FlgK [Yersinia enterocolitica
           subsp. palearctica Y11]
 gi|325665558|gb|ADZ42202.1| flagellar hook-associated protein FlgK [Yersinia enterocolitica
           subsp. palearctica 105.5R(r)]
 gi|330861098|emb|CBX71365.1| flagellar hook-associated protein 1 [Yersinia enterocolitica
           W22703]
          Length = 554

 Score = 37.5 bits (85), Expect = 0.62,   Method: Composition-based stats.
 Identities = 15/101 (14%), Positives = 33/101 (32%)

Query: 8   AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
            + A SGL+     +  +S NI N +  G    +  + +   +         GV V  + 
Sbjct: 6   MNTAMSGLSAAQYALSTVSNNITNFQVAGYNRQNTIFAQNGGTLSPAGFIGNGVSVTGVN 65

Query: 68  VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            + + F+          ++     Y  ++ +         N
Sbjct: 66  REYNAFITNQLRASQTQSSGLTTYYQQISQIDNLLSNTSNN 106


>gi|302387756|ref|YP_003823578.1| flagellar hook-associated protein FlgK [Clostridium
          saccharolyticum WM1]
 gi|302198384|gb|ADL05955.1| flagellar hook-associated protein FlgK [Clostridium
          saccharolyticum WM1]
          Length = 680

 Score = 37.5 bits (85), Expect = 0.63,   Method: Composition-based stats.
 Identities = 9/37 (24%), Positives = 15/37 (40%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGS 41
           +   IA   ++     + +  +NIAN  T G T   
Sbjct: 6  FSGFTIAQLAMSASQRALDVTGQNIANINTKGYTKQQ 42



 Score = 37.2 bits (84), Expect = 0.73,   Method: Composition-based stats.
 Identities = 5/38 (13%), Positives = 17/38 (44%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             V++  E  ++ +  R Y A  + +    +++   ++
Sbjct: 636 SGVSLDEEGINLMQFQRSYTAAARLMTTLDEVLNVLIN 673


>gi|299531280|ref|ZP_07044690.1| flagellar hook-associated protein FlgK [Comamonas testosteroni S44]
 gi|298720687|gb|EFI61634.1| flagellar hook-associated protein FlgK [Comamonas testosteroni S44]
          Length = 648

 Score = 37.5 bits (85), Expect = 0.63,   Method: Composition-based stats.
 Identities = 18/96 (18%), Positives = 34/96 (35%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           ++  ++    L      +Q    NIAN  T G +  S  ++          +   G  V 
Sbjct: 1   MSLLNVGARALMANQIALQTTGHNIANVNTAGYSRQSVAFQTSAGQNIGNGYIGNGADVA 60

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVE 100
            I  + S  +         A+A+   +  ++N L E
Sbjct: 61  TILRNFSELLNRQATAATAASAADSARSNSLNQLQE 96


>gi|123442778|ref|YP_001006755.1| flagellar hook-associated protein FlgK [Yersinia enterocolitica
           subsp. enterocolitica 8081]
 gi|122089739|emb|CAL12592.1| flagellar hook-associated protein 1 [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 554

 Score = 37.5 bits (85), Expect = 0.63,   Method: Composition-based stats.
 Identities = 15/101 (14%), Positives = 33/101 (32%)

Query: 8   AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
            + A SGL+     +  +S NI N +  G    +  + +   +         GV V  + 
Sbjct: 6   MNTAMSGLSAAQYALSTVSNNITNFQVAGYNRQNTIFAQNGGTLSPAGFIGNGVSVTGVN 65

Query: 68  VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            + + F+          ++     Y  ++ +         N
Sbjct: 66  REYNAFITNQLRASQTQSSGLTTYYQQISQIDNLLSNTSNN 106


>gi|254478858|ref|ZP_05092223.1| flagellar hook-associated protein FlgK [Carboxydibrachium pacificum
           DSM 12653]
 gi|214035220|gb|EEB75929.1| flagellar hook-associated protein FlgK [Carboxydibrachium pacificum
           DSM 12653]
          Length = 484

 Score = 37.5 bits (85), Expect = 0.63,   Method: Composition-based stats.
 Identities = 7/38 (18%), Positives = 18/38 (47%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             V++  E  +M +  + Y A  + I    +++ T ++
Sbjct: 440 SGVSLDEEMTNMLKYQKSYAACARVITAMDELIDTIIN 477



 Score = 34.8 bits (78), Expect = 3.6,   Method: Composition-based stats.
 Identities = 14/87 (16%), Positives = 28/87 (32%), Gaps = 1/87 (1%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDP-YRRKTISFEEVMHGSGGVRV 63
               IA +GL V    +++   NIANA T G T            +   +    G    
Sbjct: 4  FQGLEIAKTGLFVSQKALEVTGHNIANANTPGYTRQVVDMASIAPPTTFGMYDQWGKAIG 63

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIV 90
          + + +     + +    +     +  +
Sbjct: 64 EGVKIVDIRQIRDQFLDNQYRRENKFL 90


>gi|254234222|ref|ZP_04927545.1| flagellar hook-associated protein 1 FlgK [Pseudomonas aeruginosa
           C3719]
 gi|126166153|gb|EAZ51664.1| flagellar hook-associated protein 1 FlgK [Pseudomonas aeruginosa
           C3719]
          Length = 683

 Score = 37.5 bits (85), Expect = 0.63,   Method: Composition-based stats.
 Identities = 18/123 (14%), Positives = 35/123 (28%), Gaps = 6/123 (4%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +     I  SGL      + +   NI N +T G +      + +   F    +   G ++
Sbjct: 1   MSDLLSIGLSGLGTSQTWLTVTGHNITNVKTPGYSRQDAIQQTRIPQFSGAGYMGSGSQI 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET------NRLYMANLQT 117
             +    S F+          N+        ++ L        T       R + A    
Sbjct: 61  VDVRRLASDFLTGQLRNATSQNSELNAFLGQIDQLNSLLADNTTGVSPAMQRFFSALQTA 120

Query: 118 IKQ 120
            + 
Sbjct: 121 AQN 123



 Score = 34.8 bits (78), Expect = 4.0,   Method: Composition-based stats.
 Identities = 17/104 (16%), Positives = 34/104 (32%), Gaps = 6/104 (5%)

Query: 28  NIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHP--VAN 85
           N  N       P        T S     + + G  V+++G   +      D         
Sbjct: 580 NALNLNALQTKPTVG----GTGSTGSTYNDAYGGLVERVGTLTAQARASADASQTVLKQA 635

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
                    V++  E A++ +  + Y A+ Q I+ +  +  T +
Sbjct: 636 QDSRDSLSGVSLDEEAANLIQFQQYYSASAQVIQVARSLFDTLI 679


>gi|114046844|ref|YP_737394.1| flagellar hook-associated protein FlgK [Shewanella sp. MR-7]
 gi|113888286|gb|ABI42337.1| flagellar hook-associated protein FlgK [Shewanella sp. MR-7]
          Length = 641

 Score = 37.5 bits (85), Expect = 0.63,   Method: Composition-based stats.
 Identities = 19/107 (17%), Positives = 32/107 (29%), Gaps = 3/107 (2%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV--- 61
           I   +IA +G+    +++ + S NIANA T G                       G    
Sbjct: 3   IDLLNIARTGVLASQSQLGVTSNNIANANTAGYHRQVATQTTLDSQRLGNSFYGTGTYVS 62

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            VK+I  D +            A  +   K   ++ +          
Sbjct: 63  DVKRIYNDYAARELRIGQTTLSAAEASYGKLSELDQVFSQIGKIVPQ 109


>gi|307131608|ref|YP_003883624.1| flagellar basal-body rod protein flgF [Dickeya dadantii 3937]
 gi|306529137|gb|ADM99067.1| Flagellar basal-body rod protein flgF [Dickeya dadantii 3937]
          Length = 251

 Score = 37.5 bits (85), Expect = 0.64,   Method: Composition-based stats.
 Identities = 9/47 (19%), Positives = 19/47 (40%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
             G+++  NVN +    +M   +R +   ++ I    D       +L
Sbjct: 202 MPGVLEGSNVNTVESMVEMISNSRRFEMQMKVISNVDDNTQRANQIL 248


>gi|238919265|ref|YP_002932780.1| flagellar hook-associated protein FlgK, [Edwardsiella ictaluri
           93-146]
 gi|238868834|gb|ACR68545.1| flagellar hook-associated protein FlgK, putative [Edwardsiella
           ictaluri 93-146]
          Length = 550

 Score = 37.5 bits (85), Expect = 0.64,   Method: Composition-based stats.
 Identities = 17/99 (17%), Positives = 32/99 (32%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +    + A SGL+     + + S NI N  T G    +        +         GV V
Sbjct: 1   MANLINNAMSGLSAAQTALGVTSNNINNVYTAGYNRQTVTLAESNGTSTPAGFIGNGVTV 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETA 102
             I  D + F+           A+    +  ++ + +  
Sbjct: 61  SGIDRDYNQFIVNQLRQGQTQEAALSTYHQQISQIDDLM 99



 Score = 33.7 bits (75), Expect = 9.1,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 19/39 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN+  E  D+    + YMAN Q I+ +  +    L++
Sbjct: 511 SGVNLDEEYGDLVRFQQYYMANAQVIQSAQSLFNALLNI 549


>gi|146305251|ref|YP_001185716.1| flagellar basal-body rod protein FlgF [Pseudomonas mendocina ymp]
 gi|145573452|gb|ABP82984.1| flagellar basal-body rod protein FlgF [Pseudomonas mendocina ymp]
          Length = 243

 Score = 37.5 bits (85), Expect = 0.64,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 22/47 (46%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           SG ++  NV  + +       NRL+   ++ +K + D+      ++R
Sbjct: 195 SGYLEASNVGAIDQLVATMSLNRLFETQVKMMKAAEDLSEAGNRMIR 241


>gi|238028848|ref|YP_002913079.1| flagellar basal body rod protein FlgF [Burkholderia glumae BGR1]
 gi|37360907|dbj|BAC98361.1| flagellar basal-body rod protein [Burkholderia glumae]
 gi|237878042|gb|ACR30375.1| Flagellar basal-body rod protein [Burkholderia glumae BGR1]
          Length = 250

 Score = 37.5 bits (85), Expect = 0.64,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 17/43 (39%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           ++  NVN +     M +  R +  + + I+ +         +L
Sbjct: 205 LEGSNVNPVSAMVSMLDNARAFQLHTKLIETADQNEQNANQIL 247


>gi|89069819|ref|ZP_01157154.1| putative flagellar basal body rod protein [Oceanicola granulosus
           HTCC2516]
 gi|89044620|gb|EAR50736.1| putative flagellar basal body rod protein [Oceanicola granulosus
           HTCC2516]
          Length = 239

 Score = 37.5 bits (85), Expect = 0.64,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 30/67 (44%), Gaps = 2/67 (2%)

Query: 66  IGVDQSTFVEE--FDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
           +  D   F  E  F+P   V  A G ++  NV+ +++ A M E  R Y    + ++Q  +
Sbjct: 168 VREDGVRFRAEGGFEPVPRVRVAQGFLEESNVDPILQVARMIEVQRAYELGQRFLEQEDE 227

Query: 124 MMTTTLD 130
            +   + 
Sbjct: 228 RLRGAIR 234


>gi|237731008|ref|ZP_04561489.1| flagellar basal body rod protein FlgF [Citrobacter sp. 30_2]
 gi|226906547|gb|EEH92465.1| flagellar basal body rod protein FlgF [Citrobacter sp. 30_2]
          Length = 251

 Score = 37.5 bits (85), Expect = 0.64,   Method: Composition-based stats.
 Identities = 15/102 (14%), Positives = 30/102 (29%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           N     +T       +   +    +        +     Q+T          +   SG++
Sbjct: 147 NPGDPANTVAPVGRLKLVKATGLEVQRGDDGMFRLTQAAQATRGATLQADPSIRVMSGVL 206

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NV  +   +DM    R +   ++ I    D       LL
Sbjct: 207 EGSNVKPVAAMSDMIANARRFEMQMKIISSVDDNAGRANQLL 248


>gi|218135315|ref|ZP_03464119.1| hypothetical protein BACPEC_03220 [Bacteroides pectinophilus ATCC
          43243]
 gi|217990700|gb|EEC56711.1| hypothetical protein BACPEC_03220 [Bacteroides pectinophilus ATCC
          43243]
          Length = 606

 Score = 37.5 bits (85), Expect = 0.64,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 23/78 (29%), Gaps = 2/78 (2%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M   +   ++ +SGL      +   + N+AN    G T               +      
Sbjct: 1  MANGMTGLYVGSSGLRSAQTALNTTAHNLANVNVKGYTRQQVALSSAEYFK--IGQTITQ 58

Query: 61 VRVKKIGVDQSTFVEEFD 78
           +   +GVD        D
Sbjct: 59 DKSYGVGVDTLAIRRVRD 76


>gi|254496888|ref|ZP_05109736.1| flagellar basal body rod protein FlgF [Legionella drancourtii
           LLAP12]
 gi|254353907|gb|EET12594.1| flagellar basal body rod protein FlgF [Legionella drancourtii
           LLAP12]
          Length = 247

 Score = 37.5 bits (85), Expect = 0.65,   Method: Composition-based stats.
 Identities = 6/43 (13%), Positives = 15/43 (34%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           ++  NV  + +   M    R +  ++  +    D       +L
Sbjct: 203 LEGSNVQPVEQMVAMITAGRDFETHMNLMSTVSDNSQKLAQIL 245


>gi|149911705|ref|ZP_01900313.1| flagellar basal body protein [Moritella sp. PE36]
 gi|149805235|gb|EDM65252.1| flagellar basal body protein [Moritella sp. PE36]
          Length = 131

 Score = 37.5 bits (85), Expect = 0.65,   Method: Composition-based stats.
 Identities = 20/124 (16%), Positives = 43/124 (34%), Gaps = 2/124 (1%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
            +  I    + V+  R ++++ NIANA T G       ++    S  +    +     ++
Sbjct: 7   NALGIHQYSVGVRERRAEVLASNIANADTPGFKARDLSFKDALASATQGSSFNLSKTSER 66

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
                 +   +     P    +G      V+V  E  +  + +  Y A+L  +      M
Sbjct: 67  HISGGRSMASDLQYRIPNQPDTG--DGNTVDVQTERTNFMQNSMEYQASLSFLSSKMQTM 124

Query: 126 TTTL 129
              +
Sbjct: 125 RKAI 128


>gi|239815248|ref|YP_002944158.1| hypothetical protein Vapar_2263 [Variovorax paradoxus S110]
 gi|239801825|gb|ACS18892.1| conserved hypothetical protein [Variovorax paradoxus S110]
          Length = 259

 Score = 37.5 bits (85), Expect = 0.65,   Method: Composition-based stats.
 Identities = 14/96 (14%), Positives = 31/96 (32%), Gaps = 3/96 (3%)

Query: 35  TGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPN 94
            G    S P  +  +   E       +    +  +Q            V    G V+  N
Sbjct: 161 PGGGAESTPVGQLKVVRFENTDDFQRMGGGLMRTEQQPAQVA---EADVQLRQGFVENSN 217

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           V+ + E A + ++ R + +  +      +M+   + 
Sbjct: 218 VSSMQEMAQLIQSMRHFESMQRVALGYDEMIGGAVR 253


>gi|308050366|ref|YP_003913932.1| flagellar hook-associated protein FlgK [Ferrimonas balearica DSM
           9799]
 gi|307632556|gb|ADN76858.1| flagellar hook-associated protein FlgK [Ferrimonas balearica DSM
           9799]
          Length = 636

 Score = 37.5 bits (85), Expect = 0.66,   Method: Composition-based stats.
 Identities = 16/98 (16%), Positives = 32/98 (32%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +     IA SG+     +M + S NIAN  T G        R    +         G  V
Sbjct: 1   MADLMSIARSGVLAAQKQMGVTSNNIANVGTEGYNRQVAEQRTSESTHIAGHFLGTGTYV 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVET 101
             +    + + +         ++    ++  ++ L + 
Sbjct: 61  SDVKRIYNDYAQRELSLSISQHSQAETRFGKMSELDQL 98


>gi|253996318|ref|YP_003048382.1| flagellar basal-body rod protein FlgF [Methylotenera mobilis JLW8]
 gi|253982997|gb|ACT47855.1| flagellar basal-body rod protein FlgF [Methylotenera mobilis JLW8]
          Length = 246

 Score = 37.5 bits (85), Expect = 0.66,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 21/47 (44%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            G ++  NVNV+     M   +R +   ++ I+ + +       LL+
Sbjct: 198 QGALESSNVNVVDAMVTMISLSRQFETQMKLIQTAENNANKASQLLQ 244


>gi|285018203|ref|YP_003375914.1| flagellar hook-associated protein 1 (hap1) [Xanthomonas albilineans
           GPE PC73]
 gi|283473421|emb|CBA15926.1| probable flagellar hook-associated protein 1 (hap1) [Xanthomonas
           albilineans]
          Length = 624

 Score = 37.5 bits (85), Expect = 0.66,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 18/42 (42%)

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
              VN+  E A+M +  + Y A    I  +  M  + L  +R
Sbjct: 583 LSGVNLDEEAANMLQLQQAYEAASHIISTADTMFQSILSAIR 624



 Score = 33.7 bits (75), Expect = 8.3,   Method: Composition-based stats.
 Identities = 11/62 (17%), Positives = 21/62 (33%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          ++        L      +Q +S N+ANA T G +     +     +     +   G  + 
Sbjct: 1  MSVMSTGTGALLAFQRALQTVSHNVANANTNGYSRQRASFATNVPNQFGNYYVGNGTHIS 60

Query: 65 KI 66
           I
Sbjct: 61 DI 62


>gi|299822258|ref|ZP_07054144.1| flagellar basal body rod protein FlgG [Listeria grayi DSM 20601]
 gi|299815787|gb|EFI83025.1| flagellar basal body rod protein FlgG [Listeria grayi DSM 20601]
          Length = 259

 Score = 37.5 bits (85), Expect = 0.66,   Method: Composition-based stats.
 Identities = 21/119 (17%), Positives = 38/119 (31%), Gaps = 7/119 (5%)

Query: 17  VQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEE 76
            Q+      + NI  A T                   +     G    K G  Q      
Sbjct: 147 AQTKITVDTAGNIRRADTNELLGKLQTKFIAADQRGNLEKNGLGQLTLKTGTIQG----- 201

Query: 77  FDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT-TLDLLRD 134
             P       +G+++  NV++  E  ++ +  R+  A+   IK    +    +  LLR+
Sbjct: 202 -LPAGRALIQNGVLESSNVDMSTEMVELMDNQRMVQASSNIIKMFDTVYDKESSGLLRN 259


>gi|218531221|ref|YP_002422037.1| flagellar basal body rod protein FlgF [Methylobacterium
           chloromethanicum CM4]
 gi|218523524|gb|ACK84109.1| flagellar basal body rod protein [Methylobacterium chloromethanicum
           CM4]
          Length = 246

 Score = 37.5 bits (85), Expect = 0.66,   Method: Composition-based stats.
 Identities = 18/108 (16%), Positives = 36/108 (33%), Gaps = 1/108 (0%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +  +  +  S     +  + +I+ N+AN  TTG    S  ++   +            R 
Sbjct: 1   MQNALFVGVSAQTALARELDVIANNMANVSTTGFKARSARFQEYLMPVASADSFQRTDRR 60

Query: 64  KKIGVDQ-STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRL 110
               +DQ +       P  P +N   +    +  + V+T       R 
Sbjct: 61  LSYVIDQGTPLDLTQGPVEPDSNPMHVALRGDAFLAVQTPQGLRYTRN 108



 Score = 36.8 bits (83), Expect = 1.1,   Method: Composition-based stats.
 Identities = 19/102 (18%), Positives = 30/102 (29%), Gaps = 6/102 (5%)

Query: 29  IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASG 88
           IA   T     G     R           S G     +   ++         H      G
Sbjct: 145 IAPDGTISTNLGIRGRLRLVTFANAQALKSEG---ANLFSSEAPARPAGPGAHL---EPG 198

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            ++  NV  +VE   + + NR Y      I +  D+  T + 
Sbjct: 199 ALERSNVKPVVEMTRLMDVNRTYSMVSSVISRLDDLRGTAIR 240


>gi|113969612|ref|YP_733405.1| flagellar hook-associated protein FlgK [Shewanella sp. MR-4]
 gi|113884296|gb|ABI38348.1| flagellar hook-associated protein FlgK [Shewanella sp. MR-4]
          Length = 641

 Score = 37.5 bits (85), Expect = 0.66,   Method: Composition-based stats.
 Identities = 19/107 (17%), Positives = 32/107 (29%), Gaps = 3/107 (2%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV--- 61
           I   +IA +G+    +++ + S NIANA T G                       G    
Sbjct: 3   IDLLNIARTGVLASQSQLGVTSNNIANANTAGYHRQVATQTTLDSQRLGNSFYGTGTYVS 62

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            VK+I  D +            A  +   K   ++ +          
Sbjct: 63  DVKRIYNDYAARELRIGQTTLSAAEASYGKLSELDQVFSQIGKIVPQ 109


>gi|99082801|ref|YP_614955.1| flagellar basal body rod protein FlgF [Ruegeria sp. TM1040]
 gi|99039081|gb|ABF65693.1| Flagellar basal-body rod protein flgG [Ruegeria sp. TM1040]
          Length = 238

 Score = 37.5 bits (85), Expect = 0.66,   Method: Composition-based stats.
 Identities = 12/62 (19%), Positives = 23/62 (37%), Gaps = 1/62 (1%)

Query: 74  VEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL-DLL 132
             E  P        G ++  NVN + + A M E  R Y      +      + + + +L+
Sbjct: 177 EGETLPAAGAQVLQGFLEGSNVNTIHQLARMIEVQRAYEMGQSFLDHEDKRIRSAIDNLM 236

Query: 133 RD 134
           + 
Sbjct: 237 KS 238


>gi|312879808|ref|ZP_07739608.1| flagellar hook-associated protein FlgK [Aminomonas paucivorans DSM
           12260]
 gi|310783099|gb|EFQ23497.1| flagellar hook-associated protein FlgK [Aminomonas paucivorans DSM
           12260]
          Length = 872

 Score = 37.5 bits (85), Expect = 0.67,   Method: Composition-based stats.
 Identities = 7/41 (17%), Positives = 18/41 (43%), Gaps = 1/41 (2%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD-LLR 133
            VN+  E  D+ +  + +    + I    +M+   ++ + R
Sbjct: 829 GVNMDEEMMDIIKFQQAFNGAARYITTIDEMLDKIINGMGR 869


>gi|315497622|ref|YP_004086426.1| flagellar hook-associated protein flgk [Asticcacaulis excentricus
           CB 48]
 gi|315415634|gb|ADU12275.1| flagellar hook-associated protein FlgK [Asticcacaulis excentricus
           CB 48]
          Length = 718

 Score = 37.5 bits (85), Expect = 0.67,   Method: Composition-based stats.
 Identities = 23/107 (21%), Positives = 39/107 (36%), Gaps = 12/107 (11%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             L +  +I  SGL    ++++++S+NI+N  T G       Y RK  + +  + GS G 
Sbjct: 1   MSLNSILNIGASGLMTAQSQLRVVSDNISNVNTPG-------YIRKVGTQQASVIGSQGA 53

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            V    V  +            A            V  E  D  ++ 
Sbjct: 54  GVMSGQVMLAADK-----YLQQAAMRANSSASQAEVFHELFDQIQSQ 95



 Score = 36.0 bits (81), Expect = 1.7,   Method: Composition-based stats.
 Identities = 18/122 (14%), Positives = 37/122 (30%), Gaps = 10/122 (8%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVD 69
           +A  G   Q  R+  I+      +  G   G +    +  +      G+     K     
Sbjct: 606 VAGDGSGAQ--RLATIATKSVTFKAAGGNAGGNSTLTRYAADLAGQVGATAATAKSRMDG 663

Query: 70  QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
                 E       A          VN+  E  ++    + Y A+ + I+ + +M     
Sbjct: 664 ADALAAEATSRRTAAE--------GVNLDEELINLTTYQQAYSASSRLIQAAKEMYDVLF 715

Query: 130 DL 131
           ++
Sbjct: 716 NM 717


>gi|187925754|ref|YP_001897396.1| flagellar hook-associated protein FlgK [Burkholderia phytofirmans
           PsJN]
 gi|187716948|gb|ACD18172.1| flagellar hook-associated protein FlgK [Burkholderia phytofirmans
           PsJN]
          Length = 657

 Score = 37.5 bits (85), Expect = 0.67,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 22/41 (53%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             VN+  E A++ +  +LY AN + I+ +  +  T L + +
Sbjct: 617 SGVNINEEAANLLQYQQLYQANSKVIQTAQTLFQTILGIFQ 657



 Score = 34.1 bits (76), Expect = 7.4,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 25/70 (35%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +    ++  SGL      +    +NI+NA T G T  +  Y      +    +   GV  
Sbjct: 1  MSNLINLGLSGLNAAQWGLTTTGQNISNASTPGYTIETPVYAESGGQYTGSGYLPQGVST 60

Query: 64 KKIGVDQSTF 73
            +    S +
Sbjct: 61 TTVTRQYSQY 70


>gi|85859203|ref|YP_461405.1| flagellar hook-associated protein 1 [Syntrophus aciditrophicus SB]
 gi|85722294|gb|ABC77237.1| flagellar hook-associated protein 1 [Syntrophus aciditrophicus SB]
          Length = 463

 Score = 37.5 bits (85), Expect = 0.67,   Method: Composition-based stats.
 Identities = 13/104 (12%), Positives = 34/104 (32%), Gaps = 2/104 (1%)

Query: 30  ANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGI 89
           ANA        ++       +F   +    G   + +   ++    +      +      
Sbjct: 362 ANAVQISALKDNEAAMNGIFTFNNYVASLIGKIGQDVADAKTNVEHQNIVMSQLDRQREG 421

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +    V++  E   + +    Y A  +     ++M+ T ++L R
Sbjct: 422 I--SGVSIDEEMMKLIQYQMGYNAAGRLCSIINEMLDTLINLGR 463


>gi|317492422|ref|ZP_07950851.1| flagellar hook-associated protein FlgK [Enterobacteriaceae
           bacterium 9_2_54FAA]
 gi|316919761|gb|EFV41091.1| flagellar hook-associated protein FlgK [Enterobacteriaceae
           bacterium 9_2_54FAA]
          Length = 561

 Score = 37.5 bits (85), Expect = 0.68,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 19/39 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN+  E  ++    + Y AN Q I+ +  + +  L++
Sbjct: 522 SGVNLDEEYGNLMRFQQYYQANAQVIQTATTLFSALLNI 560



 Score = 36.8 bits (83), Expect = 0.91,   Method: Composition-based stats.
 Identities = 18/99 (18%), Positives = 34/99 (34%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +    + A SGL+     + + S N++N  T G    +  + +             GV V
Sbjct: 1   MANLINSAMSGLSAAQTALSVTSNNLSNVYTQGYNRQTVSFAQSGGISTSTGFIGNGVNV 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETA 102
             I  + ++F+           AS    Y  V+ +    
Sbjct: 61  SGINREYNSFIVGQLRQGQSDYASTTAYYQQVSQIDNLL 99


>gi|15596283|ref|NP_249777.1| flagellar hook-associated protein FlgK [Pseudomonas aeruginosa
           PAO1]
 gi|218892950|ref|YP_002441819.1| flagellar hook-associated protein FlgK [Pseudomonas aeruginosa
           LESB58]
 gi|9947002|gb|AAG04475.1|AE004539_17 flagellar hook-associated protein 1 FlgK [Pseudomonas aeruginosa
           PAO1]
 gi|218773178|emb|CAW28990.1| flagellar hook-associated protein 1 FlgK [Pseudomonas aeruginosa
           LESB58]
          Length = 683

 Score = 37.5 bits (85), Expect = 0.68,   Method: Composition-based stats.
 Identities = 18/123 (14%), Positives = 35/123 (28%), Gaps = 6/123 (4%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +     I  SGL      + +   NI N +T G +      + +   F    +   G ++
Sbjct: 1   MSDLLSIGLSGLGTSQTWLTVTGHNITNVKTPGYSRQDAIQQTRIPQFSGAGYMGSGSQI 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET------NRLYMANLQT 117
             +    S F+          N+        ++ L        T       R + A    
Sbjct: 61  VDVRRLASDFLTGQLRNATSQNSELNAFLGQIDQLNSLLADNTTGVSPAMQRFFSALQTA 120

Query: 118 IKQ 120
            + 
Sbjct: 121 AQN 123



 Score = 34.8 bits (78), Expect = 3.6,   Method: Composition-based stats.
 Identities = 17/104 (16%), Positives = 34/104 (32%), Gaps = 6/104 (5%)

Query: 28  NIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHP--VAN 85
           N  N       P        T S     + + G  V+++G   +      D         
Sbjct: 580 NALNLNALQTKPTVG----GTDSTGSTYNDAYGGLVERVGTLTAQARASADASQTVLKQA 635

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
                    V++  E A++ +  + Y A+ Q I+ +  +  T +
Sbjct: 636 QDSRDSLSGVSLDEEAANLIQFQQYYSASAQVIQVARSLFDTLI 679


>gi|327393477|dbj|BAK10899.1| flagellar hook-associated protein 1 [Pantoea ananatis AJ13355]
          Length = 546

 Score = 37.5 bits (85), Expect = 0.68,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 39/105 (37%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           + +  + A SGL+   A +   S NI+N    G +  +        + +   +   GV V
Sbjct: 1   MSSIINSAMSGLSAAQAALSTTSNNISNYTVAGYSRQTTILAEANSTLQGKSYYGNGVNV 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
             +  +  +F+     G      +   +Y  V+ + +      TN
Sbjct: 61  TGVQREYDSFIAAQLRGSSATYNAANTQYSQVSNIDDLMSTSTTN 105


>gi|78047580|ref|YP_363755.1| flagellar hook-associated protein FlgK [Xanthomonas campestris
          pv. vesicatoria str. 85-10]
 gi|325927969|ref|ZP_08189190.1| flagellar hook-associated protein FlgK [Xanthomonas perforans
          91-118]
 gi|78036010|emb|CAJ23701.1| flagellar hook-associated protein 1 (HAP1) [Xanthomonas
          campestris pv. vesicatoria str. 85-10]
 gi|325541654|gb|EGD13175.1| flagellar hook-associated protein FlgK [Xanthomonas perforans
          91-118]
          Length = 624

 Score = 37.5 bits (85), Expect = 0.68,   Method: Composition-based stats.
 Identities = 11/64 (17%), Positives = 23/64 (35%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          ++      S L      +  +S N+AN  T G +     +  +T +         G ++ 
Sbjct: 1  MSIMSTGTSALIAFQRALSTVSHNVANINTEGYSRQRVEFATRTPTDMGYAFVGNGAKIT 60

Query: 65 KIGV 68
           +G 
Sbjct: 61 DVGR 64


>gi|50120645|ref|YP_049812.1| flagellar hook-associated protein FlgK [Pectobacterium
          atrosepticum SCRI1043]
 gi|49611171|emb|CAG74617.1| flagellar hook-associated protein 1 [Pectobacterium atrosepticum
          SCRI1043]
          Length = 568

 Score = 37.5 bits (85), Expect = 0.68,   Method: Composition-based stats.
 Identities = 18/96 (18%), Positives = 34/96 (35%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +    + A SGL      +  +S NI+N   TG +  +    +   S     +   GV V
Sbjct: 1  MSNLINTAMSGLKGAQIALSTVSNNISNQAVTGYSRQNAILEQAISSSTSAGYIGNGVNV 60

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
            I    + F+          ++S    Y  ++ + 
Sbjct: 61 VSINRQYNEFITNQLRASQTTSSSVSTYYEQISKID 96


>gi|238758104|ref|ZP_04619284.1| hypothetical protein yaldo0001_12400 [Yersinia aldovae ATCC
          35236]
 gi|238703642|gb|EEP96179.1| hypothetical protein yaldo0001_12400 [Yersinia aldovae ATCC
          35236]
          Length = 555

 Score = 37.5 bits (85), Expect = 0.69,   Method: Composition-based stats.
 Identities = 13/92 (14%), Positives = 32/92 (34%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
           + A SGL+     +  +S NI N +  G    +  + +   +         GV +  + 
Sbjct: 6  MNTAMSGLSAAQYALSTVSNNITNFQVAGYNRQNAIFAQNGGTLSPAGFLGNGVTITGVN 65

Query: 68 VDQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
           + + F+          ++     Y  ++ + 
Sbjct: 66 REYNAFITNQLRSSQTQSSGLTTYYQQISQID 97


>gi|229827760|ref|ZP_04453829.1| hypothetical protein GCWU000182_03152 [Abiotrophia defectiva ATCC
          49176]
 gi|229787959|gb|EEP24073.1| hypothetical protein GCWU000182_03152 [Abiotrophia defectiva ATCC
          49176]
          Length = 618

 Score = 37.5 bits (85), Expect = 0.69,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 22/63 (34%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M        I  +GL    A +   + NI NA+T G +      + K        +G  G
Sbjct: 1  MPSTFFGLDIGTTGLHTYQAALNNTAHNITNAKTEGYSRQQVNRQAKDPIAIAQRYGMVG 60

Query: 61 VRV 63
            V
Sbjct: 61 TGV 63


>gi|91785627|ref|YP_560833.1| flagellar hook-associated protein FlgK [Burkholderia xenovorans
           LB400]
 gi|91689581|gb|ABE32781.1| Flagellar hook-associated protein [Burkholderia xenovorans LB400]
          Length = 657

 Score = 37.5 bits (85), Expect = 0.69,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 22/41 (53%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             VN+  E A++ +  +LY AN + I+ +  +  T L + +
Sbjct: 617 SGVNINEEAANLLQYQQLYQANSKVIQTAQTLFQTILGIFQ 657



 Score = 33.7 bits (75), Expect = 7.7,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 25/70 (35%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +    ++  SGL      +    +NI+NA T G T  +  Y      +    +   GV  
Sbjct: 1  MSNLINLGLSGLNAAQWGLTTTGQNISNASTPGYTIETPVYAESGGQYTGSGYLPQGVST 60

Query: 64 KKIGVDQSTF 73
            +    S +
Sbjct: 61 TTVTRQYSQY 70


>gi|291562058|emb|CBL40874.1| flagellar hook-associated protein FlgK [butyrate-producing
          bacterium SS3/4]
          Length = 557

 Score = 37.2 bits (84), Expect = 0.69,   Method: Composition-based stats.
 Identities = 15/76 (19%), Positives = 25/76 (32%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           +  + A S L     R+ I  +N++N  T G T           +     + +G     
Sbjct: 6  FSGFNTALSALQANQKRLDITGQNLSNMNTAGYTRQQLEASSLNYTNPVSHYSNGNETAV 65

Query: 65 KIGVDQSTFVEEFDPG 80
            GV      +  DP 
Sbjct: 66 GFGVSMDRVSQIRDPY 81


>gi|125974729|ref|YP_001038639.1| flagellar hook-associated protein FlgK [Clostridium thermocellum
           ATCC 27405]
 gi|125714954|gb|ABN53446.1| flagellar hook-associated protein FlgK [Clostridium thermocellum
           ATCC 27405]
          Length = 489

 Score = 37.2 bits (84), Expect = 0.69,   Method: Composition-based stats.
 Identities = 18/110 (16%), Positives = 37/110 (33%), Gaps = 10/110 (9%)

Query: 23  QIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHP 82
             I+  IAN R               +S    +       +  +G   S   +  +    
Sbjct: 381 NTIALAIANLRDNRVIAD--------VSGMVSLDDYYQTIILIVGTGGSEAKKTAENQRT 432

Query: 83  VANASGIVKYP--NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           + N++   +     V++  E ++M      Y A+ + I    DM+ T + 
Sbjct: 433 LVNSAEAQRQSIMGVSMDEEMSNMMRYKFAYSASSRAINVIDDMLETIIT 482



 Score = 33.7 bits (75), Expect = 8.8,   Method: Composition-based stats.
 Identities = 12/64 (18%), Positives = 19/64 (29%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           A   IA SG+ V    + +   N+AN  T G                       G  ++
Sbjct: 3  FAGLEIARSGMYVNERALSVTGHNVANVNTKGYARQQAMITTAPYLNLMRYQIGLGASIQ 62

Query: 65 KIGV 68
          +   
Sbjct: 63 ETRQ 66


>gi|56964843|ref|YP_176574.1| flagellar hook-associated protein 1 FlgK [Bacillus clausii KSM-K16]
 gi|56911086|dbj|BAD65613.1| flagellar hook-associated protein 1 FlgK [Bacillus clausii KSM-K16]
          Length = 528

 Score = 37.2 bits (84), Expect = 0.69,   Method: Composition-based stats.
 Identities = 6/38 (15%), Positives = 16/38 (42%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             V++  E   + +    Y A  +T+    +M+   ++
Sbjct: 484 SGVSLDEEMTLLIQFQHAYNAAARTMTAMDEMLDQIIN 521


>gi|242278417|ref|YP_002990546.1| flagellar hook-associated protein FlgK [Desulfovibrio salexigens
          DSM 2638]
 gi|242121311|gb|ACS79007.1| flagellar hook-associated protein FlgK [Desulfovibrio salexigens
          DSM 2638]
          Length = 583

 Score = 37.2 bits (84), Expect = 0.70,   Method: Composition-based stats.
 Identities = 14/66 (21%), Positives = 18/66 (27%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            L  +  I    LA     +   S NIAN+ T G       Y               G 
Sbjct: 1  MSLTNTLSIGQRALANAQVSINTTSNNIANSETEGYQRADAVYDSLGNINSYGNSLGTGA 60

Query: 62 RVKKIG 67
           +  I 
Sbjct: 61 DIVAIR 66



 Score = 34.1 bits (76), Expect = 6.0,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 18/39 (46%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VNV  E  ++    + Y A  Q I  + DM+ T L +
Sbjct: 544 SGVNVDEELVNLTRHQQQYEAACQIISVTRDMIDTVLGI 582


>gi|296157449|ref|ZP_06840284.1| flagellar hook-associated protein FlgK [Burkholderia sp. Ch1-1]
 gi|295892221|gb|EFG72004.1| flagellar hook-associated protein FlgK [Burkholderia sp. Ch1-1]
          Length = 657

 Score = 37.2 bits (84), Expect = 0.70,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 22/41 (53%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             VN+  E A++ +  +LY AN + I+ +  +  T L + +
Sbjct: 617 SGVNINEEAANLLQYQQLYQANSKVIQTAQTLFQTILGIFQ 657



 Score = 34.1 bits (76), Expect = 7.0,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 25/70 (35%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +    ++  SGL      +    +NI+NA T G T  +  Y      +    +   GV  
Sbjct: 1  MSNLINLGLSGLNAAQWGLTTTGQNISNASTPGYTIENPVYAESGGQYTGSGYLPQGVST 60

Query: 64 KKIGVDQSTF 73
            +    S +
Sbjct: 61 TTVTRQYSQY 70


>gi|163735544|ref|ZP_02142976.1| flagellar hook-associated protein K [Roseobacter litoralis Och 149]
 gi|161391164|gb|EDQ15501.1| flagellar hook-associated protein K [Roseobacter litoralis Och 149]
          Length = 481

 Score = 37.2 bits (84), Expect = 0.70,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 19/38 (50%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            V+   E   +    + Y AN++ I+ + +MM T L +
Sbjct: 444 GVDSDQELQRLLIVEQAYAANVRMIEAADEMMQTILRI 481


>gi|119385424|ref|YP_916480.1| flagellar hook-associated protein FlgK [Paracoccus denitrificans
           PD1222]
 gi|119375191|gb|ABL70784.1| flagellar hook-associated protein FlgK [Paracoccus denitrificans
           PD1222]
          Length = 486

 Score = 37.2 bits (84), Expect = 0.70,   Method: Composition-based stats.
 Identities = 10/49 (20%), Positives = 19/49 (38%)

Query: 83  VANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            +     +    V+   E   +    R Y AN +  + ++DM+   L L
Sbjct: 437 QSGLKAALLAEGVDSDKEMESLLALERAYAANAKVFQTANDMLDAILRL 485



 Score = 33.3 bits (74), Expect = 10.0,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 21/48 (43%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI 49
            + ++   A SGL   S  ++I+S NIANA T G          +  
Sbjct: 1  MSISSAISNAVSGLTAASRGIEIVSSNIANALTPGHARRELDLSSRPS 48


>gi|170743259|ref|YP_001771914.1| flagellar basal body rod protein FlgB [Methylobacterium sp. 4-46]
 gi|168197533|gb|ACA19480.1| flagellar basal body rod protein [Methylobacterium sp. 4-46]
          Length = 133

 Score = 37.2 bits (84), Expect = 0.71,   Method: Composition-based stats.
 Identities = 20/121 (16%), Positives = 37/121 (30%), Gaps = 8/121 (6%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFV 74
           +     R ++++EN+ANA T G                    G  G+ V++         
Sbjct: 16  MQWHQTRQKVLAENVANANTPGFKARDLRAPVFQPDGSVAAAGLPGIGVERTSPLHMAGT 75

Query: 75  EEFDPGHPVANASGIVKYPN-VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
                         +V   N V++  E     +    Y         +  +   +L LLR
Sbjct: 76  GFTPSEDRTRTRFDVVPSGNAVSLEDEMLKAADNQADYQL-------AASLYQKSLQLLR 128

Query: 134 D 134
           +
Sbjct: 129 N 129


>gi|254973935|ref|ZP_05270407.1| flagellar basal body rod protein FlgG [Clostridium difficile
           QCD-66c26]
 gi|255091321|ref|ZP_05320799.1| flagellar basal body rod protein FlgG [Clostridium difficile CIP
           107932]
 gi|255312979|ref|ZP_05354562.1| flagellar basal body rod protein FlgG [Clostridium difficile
           QCD-76w55]
 gi|255515738|ref|ZP_05383414.1| flagellar basal body rod protein FlgG [Clostridium difficile
           QCD-97b34]
 gi|255648832|ref|ZP_05395734.1| flagellar basal body rod protein FlgG [Clostridium difficile
           QCD-37x79]
 gi|260682049|ref|YP_003213334.1| flagellar basal body rod protein FlgG [Clostridium difficile CD196]
 gi|260685647|ref|YP_003216780.1| flagellar basal body rod protein FlgG [Clostridium difficile
           R20291]
 gi|306518946|ref|ZP_07405293.1| flagellar basal body rod protein FlgG [Clostridium difficile
           QCD-32g58]
 gi|260208212|emb|CBA60569.1| flagellar basal-body rod protein FlgG [Clostridium difficile CD196]
 gi|260211663|emb|CBE01931.1| flagellar basal-body rod protein FlgG [Clostridium difficile
           R20291]
          Length = 257

 Score = 37.2 bits (84), Expect = 0.71,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 19/41 (46%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
              ++  NV+++ E  +M   +R Y AN + I+     +  
Sbjct: 208 QSAIESSNVDMVSEINNMMTISREYEANQKIIQAMDSKLAK 248


>gi|294665573|ref|ZP_06730854.1| flagellar protein [Xanthomonas fuscans subsp. aurantifolii str.
          ICPB 10535]
 gi|292604671|gb|EFF48041.1| flagellar protein [Xanthomonas fuscans subsp. aurantifolii str.
          ICPB 10535]
          Length = 624

 Score = 37.2 bits (84), Expect = 0.72,   Method: Composition-based stats.
 Identities = 11/64 (17%), Positives = 23/64 (35%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          ++      S L      +  +S N+AN  T G +     +  +T +         G ++ 
Sbjct: 1  MSIMSTGTSALIAFQRALSTVSHNVANINTEGYSRQRVEFATRTPTDMGYAFVGNGAKIT 60

Query: 65 KIGV 68
           +G 
Sbjct: 61 DVGR 64


>gi|256005260|ref|ZP_05430227.1| flagellar hook-associated protein FlgK [Clostridium thermocellum
           DSM 2360]
 gi|255990811|gb|EEU00926.1| flagellar hook-associated protein FlgK [Clostridium thermocellum
           DSM 2360]
 gi|316941863|gb|ADU75897.1| flagellar hook-associated protein FlgK [Clostridium thermocellum
           DSM 1313]
          Length = 489

 Score = 37.2 bits (84), Expect = 0.72,   Method: Composition-based stats.
 Identities = 18/110 (16%), Positives = 37/110 (33%), Gaps = 10/110 (9%)

Query: 23  QIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHP 82
             I+  IAN R               +S    +       +  +G   S   +  +    
Sbjct: 381 NTIALAIANLRDNRVIAD--------VSGMVSLDDYYQTIILIVGTGGSEAEKTAENQRT 432

Query: 83  VANASGIVKYP--NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           + N++   +     V++  E ++M      Y A+ + I    DM+ T + 
Sbjct: 433 LVNSAEAQRQSIMGVSMDEEMSNMMRYKFAYSASSRAINVIDDMLETIIT 482



 Score = 33.7 bits (75), Expect = 9.5,   Method: Composition-based stats.
 Identities = 12/64 (18%), Positives = 19/64 (29%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           A   IA SG+ V    + +   N+AN  T G                       G  ++
Sbjct: 3  FAGLEIARSGMYVNERALSVTGHNVANVNTKGYARQQAMITTGPYLNLMRYQIGLGASIQ 62

Query: 65 KIGV 68
          +   
Sbjct: 63 ETRQ 66


>gi|209967001|ref|YP_002299916.1| flagellar hook-associated protein FlgK, putative [Rhodospirillum
           centenum SW]
 gi|209960467|gb|ACJ01104.1| flagellar hook-associated protein FlgK, putative [Rhodospirillum
           centenum SW]
          Length = 526

 Score = 37.2 bits (84), Expect = 0.72,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 14/43 (32%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
                 VN+  E   +    R Y A+ + I     M  +   +
Sbjct: 482 YSDKTGVNLDEEVVMLTVLQRSYAASSRVITTVEQMYDSLFRI 524


>gi|261856363|ref|YP_003263646.1| flagellar basal-body rod protein FlgB [Halothiobacillus
           neapolitanus c2]
 gi|261836832|gb|ACX96599.1| flagellar basal-body rod protein FlgB [Halothiobacillus
           neapolitanus c2]
          Length = 132

 Score = 37.2 bits (84), Expect = 0.72,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 37/124 (29%), Gaps = 16/124 (12%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
           +   I    L  QS RM I++ NIANA T         ++ + +SF + +  + G     
Sbjct: 4   SIFGIHGQALVFQSQRMGILASNIANADTPN-------FKARDLSFHDALQAAAGQGSAG 56

Query: 66  IG---VDQSTFVEEFDPGHPVA------NASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
                             +  A           +    V++  E     E    Y   L 
Sbjct: 57  QPLALAHNQPGQLSGTAENGGAQELYRIPDQPALDGNTVDMDRERVRFTENAVSYQTTLS 116

Query: 117 TIKQ 120
            +  
Sbjct: 117 FLNS 120


>gi|163742564|ref|ZP_02149950.1| flagellar hook-associated protein K [Phaeobacter gallaeciensis
           2.10]
 gi|161384149|gb|EDQ08532.1| flagellar hook-associated protein K [Phaeobacter gallaeciensis
           2.10]
          Length = 472

 Score = 37.2 bits (84), Expect = 0.72,   Method: Composition-based stats.
 Identities = 9/40 (22%), Positives = 18/40 (45%)

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
              V+   E  ++    ++Y AN + I    ++M T L +
Sbjct: 433 AQGVDSDAELQNLIVIEKVYQANARMISVVDELMETLLRI 472


>gi|91224198|ref|ZP_01259461.1| putative flagellar basal-body rod protein [Vibrio alginolyticus
           12G01]
 gi|269965645|ref|ZP_06179758.1| Flagellar basal-body rod protein flgF [Vibrio alginolyticus 40B]
 gi|91191109|gb|EAS77375.1| putative flagellar basal-body rod protein [Vibrio alginolyticus
           12G01]
 gi|269829713|gb|EEZ83949.1| Flagellar basal-body rod protein flgF [Vibrio alginolyticus 40B]
          Length = 243

 Score = 37.2 bits (84), Expect = 0.72,   Method: Composition-based stats.
 Identities = 6/47 (12%), Positives = 19/47 (40%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +   ++  NV+ + E   +    R +   ++ +K +  +      L+
Sbjct: 194 SPEHIEGSNVSAIDELVSVMSLTRNFEMQVRMMKTAETLAKAGNKLM 240


>gi|120598238|ref|YP_962812.1| flagellar hook-associated protein FlgK [Shewanella sp. W3-18-1]
 gi|120558331|gb|ABM24258.1| flagellar hook-associated protein FlgK [Shewanella sp. W3-18-1]
          Length = 641

 Score = 37.2 bits (84), Expect = 0.72,   Method: Composition-based stats.
 Identities = 16/101 (15%), Positives = 30/101 (29%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           I   +IA +G+    +++ + S NIANA T G                       G  V 
Sbjct: 3   IDLLNIARTGVLASQSQLGVTSNNIANANTAGYHRQVATQSTLESQRFGNSFYGTGTYVD 62

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
            +    + +            +     Y  ++ L +     
Sbjct: 63  DVKRIYNDYAARELRIGQTTLSGAEASYGKLSELDQLFSQI 103



 Score = 34.5 bits (77), Expect = 4.9,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 19/41 (46%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             VN+  E A++    + Y A+ + +  +  +  T L  +R
Sbjct: 601 SGVNLDEEAANLMRFQQAYQASARIMTTAQQIFDTLLTSVR 641


>gi|300716224|ref|YP_003741027.1| flagellar hook-filament junction protein 1 [Erwinia billingiae
           Eb661]
 gi|299062060|emb|CAX59176.1| Flagellar hook-filament junction protein 1 [Erwinia billingiae
           Eb661]
          Length = 550

 Score = 37.2 bits (84), Expect = 0.73,   Method: Composition-based stats.
 Identities = 15/98 (15%), Positives = 36/98 (36%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +    + A SG+   SA +   S NI+N    G +  +    +   +     +   GV V
Sbjct: 1   MSNLINTALSGINAASAALNTTSNNISNYSVAGYSRQTTVLAQAGSTLSGTNYYGNGVSV 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVET 101
             +  +   F+          +++   +Y  ++ + + 
Sbjct: 61  ASVNREYDAFITNQLRAASTQSSALTTQYNQLSNIDDM 98


>gi|315636316|ref|ZP_07891566.1| flagellar distal rod protein FlgG [Arcobacter butzleri JV22]
 gi|315479405|gb|EFU70088.1| flagellar distal rod protein FlgG [Arcobacter butzleri JV22]
          Length = 239

 Score = 37.2 bits (84), Expect = 0.73,   Method: Composition-based stats.
 Identities = 12/109 (11%), Positives = 34/109 (31%), Gaps = 2/109 (1%)

Query: 22  MQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGH 81
           +     N+ NA             +  ++     +         +  +     +     +
Sbjct: 126 VDSNGNNVLNADNEAIVIEDGFESQIGVAKTPYTNLEKMGDNTYLVKNIDEAEQIE--NN 183

Query: 82  PVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
                 G V+  NVN +    ++ + +R +  + + IK   D+    ++
Sbjct: 184 DGKIVRGAVEQSNVNSVTAMVELIDAHRRFDQSQRAIKTIDDLNAGLIE 232


>gi|311280011|ref|YP_003942242.1| flagellar hook-associated protein FlgK [Enterobacter cloacae
          SCF1]
 gi|308749206|gb|ADO48958.1| flagellar hook-associated protein FlgK [Enterobacter cloacae
          SCF1]
          Length = 547

 Score = 37.2 bits (84), Expect = 0.74,   Method: Composition-based stats.
 Identities = 16/96 (16%), Positives = 36/96 (37%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          + +  + A SGL    A +  +S NIA+   +G T  +    +   +         GV V
Sbjct: 1  MSSLINSAMSGLGAAQAALNTVSNNIASYNVSGYTRQTTVLAQSNSTLGPGGWVGNGVTV 60

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
            +  + + F+          ++    +Y  ++ + 
Sbjct: 61 TGVQREYNAFITNQLRAAQNQSSGLTTRYQQMSKID 96


>gi|300693339|ref|YP_003749312.1| flagellar component of cell-proximal portion of basal-body rod
           [Ralstonia solanacearum PSI07]
 gi|299075376|emb|CBJ34671.1| flagellar component of cell-proximal portion of basal-body rod
           [Ralstonia solanacearum PSI07]
          Length = 245

 Score = 37.2 bits (84), Expect = 0.74,   Method: Composition-based stats.
 Identities = 8/44 (18%), Positives = 19/44 (43%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  NV++     +M E +R     ++ +        +  +LLR
Sbjct: 200 LEGSNVSLTDSLVNMIEISRQLELQMKALHTGDTNAQSANELLR 243


>gi|299068733|emb|CBJ39972.1| flagellar component of cell-proximal portion of basal-body rod
           [Ralstonia solanacearum CMR15]
          Length = 245

 Score = 37.2 bits (84), Expect = 0.74,   Method: Composition-based stats.
 Identities = 8/44 (18%), Positives = 19/44 (43%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  NV++     +M E +R     ++ +        +  +LLR
Sbjct: 200 LEGSNVSLTDSLVNMIEISRQLELQMKALHTGDTNAQSANELLR 243


>gi|294624307|ref|ZP_06703010.1| flagellar protein [Xanthomonas fuscans subsp. aurantifolii str.
          ICPB 11122]
 gi|292601389|gb|EFF45423.1| flagellar protein [Xanthomonas fuscans subsp. aurantifolii str.
          ICPB 11122]
          Length = 624

 Score = 37.2 bits (84), Expect = 0.74,   Method: Composition-based stats.
 Identities = 11/64 (17%), Positives = 23/64 (35%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          ++      S L      +  +S N+AN  T G +     +  +T +         G ++ 
Sbjct: 1  MSIMSTGTSALIAFQRALSTVSHNVANINTEGYSRQRVEFATRTPTDMGYAFVGNGAKIT 60

Query: 65 KIGV 68
           +G 
Sbjct: 61 DVGR 64


>gi|90408061|ref|ZP_01216232.1| flagellar basal-body rod protein FlgF [Psychromonas sp. CNPT3]
 gi|90310818|gb|EAS38932.1| flagellar basal-body rod protein FlgF [Psychromonas sp. CNPT3]
          Length = 248

 Score = 37.2 bits (84), Expect = 0.74,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 22/44 (50%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  NVN+  E   +    R +   ++ +K++ +M   +  LLR
Sbjct: 203 LEASNVNMSSELTGLINLQRQFDMQVKMMKKAEEMDKASESLLR 246


>gi|17548567|ref|NP_521907.1| flagellar basal-body rod protein FlgF [Ralstonia solanacearum
           GMI1000]
 gi|17430815|emb|CAD17497.1| probable flagellar basal-body rod protein flgf [Ralstonia
           solanacearum GMI1000]
          Length = 245

 Score = 37.2 bits (84), Expect = 0.74,   Method: Composition-based stats.
 Identities = 8/44 (18%), Positives = 19/44 (43%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  NV++     +M E +R     ++ +        +  +LLR
Sbjct: 200 LEGSNVSLTDSLVNMIEISRQLELQMKALHTGDTNAQSANELLR 243


>gi|291617026|ref|YP_003519768.1| FlgK [Pantoea ananatis LMG 20103]
 gi|291152056|gb|ADD76640.1| FlgK [Pantoea ananatis LMG 20103]
          Length = 546

 Score = 37.2 bits (84), Expect = 0.75,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 39/105 (37%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           + +  + A SGL+   A +   S NI+N    G +  +        + +   +   GV V
Sbjct: 1   MSSIINSAMSGLSAAQAALSTTSNNISNYTVAGYSRQTTILAEANSTLQGKSYYGNGVNV 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
             +  +  +F+     G      +   +Y  V+ + +      TN
Sbjct: 61  TGVQREYDSFIAAQLRGSSATYNAANTQYSQVSNIDDLMSTSTTN 105


>gi|218135314|ref|ZP_03464118.1| hypothetical protein BACPEC_03219 [Bacteroides pectinophilus ATCC
          43243]
 gi|217990699|gb|EEC56710.1| hypothetical protein BACPEC_03219 [Bacteroides pectinophilus ATCC
          43243]
          Length = 512

 Score = 37.2 bits (84), Expect = 0.75,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 22/63 (34%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M       +IA +GL   S  +   + N++N  T G +                 +G+ G
Sbjct: 1  MPSTFFGLNIAYTGLQAASVSINTTAHNVSNVNTKGYSRQQTDVSADNALRTYAKYGTAG 60

Query: 61 VRV 63
            V
Sbjct: 61 SGV 63


>gi|254438850|ref|ZP_05052344.1| conserved domain protein [Octadecabacter antarcticus 307]
 gi|198254296|gb|EDY78610.1| conserved domain protein [Octadecabacter antarcticus 307]
          Length = 255

 Score = 37.2 bits (84), Expect = 0.75,   Method: Composition-based stats.
 Identities = 10/80 (12%), Positives = 25/80 (31%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                 +   G  R +         +            +G ++  NVN+  E   M +  
Sbjct: 174 FPNVTALRQLGMGRFQATEEAGGLMLGVSGQDGFGKVQTGALESSNVNLTTELTSMIQAQ 233

Query: 109 RLYMANLQTIKQSHDMMTTT 128
           + +  + + ++   DM+   
Sbjct: 234 QQFSGSSRILQAYSDMIEKL 253


>gi|148546713|ref|YP_001266815.1| flagellar hook-associated protein FlgK [Pseudomonas putida F1]
 gi|148510771|gb|ABQ77631.1| flagellar hook-associated protein FlgK [Pseudomonas putida F1]
          Length = 676

 Score = 37.2 bits (84), Expect = 0.75,   Method: Composition-based stats.
 Identities = 15/96 (15%), Positives = 31/96 (32%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          + +  +I  SGL    + M  +  NIANA     +   +  + K       +    G  +
Sbjct: 1  MASLINIGMSGLGAAQSGMYTLGNNIANADVESYSRQQNVQKTKGGQQVGQVFIGSGTTL 60

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
            +    + F+E         ++        +  L 
Sbjct: 61 ADVRRVYNAFIENQLRTTTSLSSEASSYLDQITPLD 96


>gi|296282273|ref|ZP_06860271.1| flagellar hook-associated protein FlgK [Citromicrobium
           bathyomarinum JL354]
          Length = 446

 Score = 37.2 bits (84), Expect = 0.75,   Method: Composition-based stats.
 Identities = 15/127 (11%), Positives = 40/127 (31%), Gaps = 6/127 (4%)

Query: 13  SGLAVQSARMQIISEN---IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVD 69
           SG    + R+ ++S      A A +   +           +        G   +      
Sbjct: 320 SGTTAATLRVAMVSGAGLATAPAGSPAGSRDQQNLAEMRQALSAANPAEGLNSILFDISS 379

Query: 70  QSTFVEEFDPGHPV---ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           +                +    + +   V++  E A++    + + A+ + ++ + D+  
Sbjct: 380 KVAGRTVTQSALETIASSARIALEEQSGVDLDNEAANLIRYQQAFQASGKAMQVASDIFD 439

Query: 127 TTLDLLR 133
           T L + R
Sbjct: 440 TLLGIGR 446


>gi|110632659|ref|YP_672867.1| flagellar basal body rod protein FlgB [Mesorhizobium sp. BNC1]
 gi|110283643|gb|ABG61702.1| flagellar basal-body rod protein flgB [Chelativorans sp. BNC1]
          Length = 135

 Score = 37.2 bits (84), Expect = 0.75,   Method: Composition-based stats.
 Identities = 21/110 (19%), Positives = 37/110 (33%), Gaps = 5/110 (4%)

Query: 19  SARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFD 78
           S R   ++ NIAN  T            K +    V   +   + +  GV  ++F  +  
Sbjct: 28  SVRQAAVAGNIANINTPSYKALDVEPFEKVLDGTRVAMQATHAQHQHTGVTPASFSLDES 87

Query: 79  PGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
               +  +       +V +  E     E  R +  N   +K  H M+  T
Sbjct: 88  ENPKMLPSEN-----SVVLEDELVKAGEVRRAFELNTAIVKAFHRMILMT 132


>gi|126697840|ref|YP_001086737.1| flagellar basal body rod protein FlgG [Clostridium difficile 630]
 gi|115249277|emb|CAJ67090.1| Flagellar hook-basal body complex protein FlgG1 [Clostridium
           difficile]
          Length = 257

 Score = 37.2 bits (84), Expect = 0.76,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 19/41 (46%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
              ++  NV+++ E  +M   +R Y AN + I+     +  
Sbjct: 208 QSAIESSNVDMVSEINNMMTISREYEANQKIIQAMDSKLAK 248


>gi|21242721|ref|NP_642303.1| flagellar hook-associated protein FlgK [Xanthomonas axonopodis
          pv. citri str. 306]
 gi|21108196|gb|AAM36839.1| flagellar protein [Xanthomonas axonopodis pv. citri str. 306]
          Length = 624

 Score = 37.2 bits (84), Expect = 0.76,   Method: Composition-based stats.
 Identities = 11/64 (17%), Positives = 23/64 (35%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          ++      S L      +  +S N+AN  T G +     +  +T +         G ++ 
Sbjct: 1  MSIMSTGTSALIAFQRALSTVSHNVANINTEGYSRQRVEFATRTPTDMGYAFVGNGAKIT 60

Query: 65 KIGV 68
           +G 
Sbjct: 61 DVGR 64


>gi|268589172|gb|ACZ06862.1| flagella hook-associated protein [Xanthomonas axonopodis pv.
          glycines]
          Length = 624

 Score = 37.2 bits (84), Expect = 0.77,   Method: Composition-based stats.
 Identities = 11/64 (17%), Positives = 23/64 (35%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          ++      S L      +  +S N+AN  T G +     +  +T +         G ++ 
Sbjct: 1  MSIMSTGTSALIAFQRALSTVSHNVANINTEGYSRQRVEFATRTPTDMGYAFVGNGAKIT 60

Query: 65 KIGV 68
           +G 
Sbjct: 61 DVGR 64


>gi|327398582|ref|YP_004339451.1| flagellar basal body rod protein [Hippea maritima DSM 10411]
 gi|327181211|gb|AEA33392.1| flagellar basal body rod protein [Hippea maritima DSM 10411]
          Length = 103

 Score = 37.2 bits (84), Expect = 0.77,   Method: Composition-based stats.
 Identities = 20/125 (16%), Positives = 40/125 (32%), Gaps = 25/125 (20%)

Query: 8   AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
            + + SG+     R  I + N+AN  T            K ++        GGV  K   
Sbjct: 3   INTSLSGIKNAFYRQDITANNVANINTKN---------YKQVNVINQEAKGGGVEAKTTV 53

Query: 68  VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
              +                      NV++  +  +         AN+  I+  ++M+ +
Sbjct: 54  SKAAPNRN----------------GNNVSLADQMVNQISNQDQNKANVNVIRAQNEMIGS 97

Query: 128 TLDLL 132
            +D+ 
Sbjct: 98  LIDIK 102


>gi|221069316|ref|ZP_03545421.1| flagellar hook-associated protein FlgK [Comamonas testosteroni
           KF-1]
 gi|220714339|gb|EED69707.1| flagellar hook-associated protein FlgK [Comamonas testosteroni
           KF-1]
          Length = 648

 Score = 37.2 bits (84), Expect = 0.77,   Method: Composition-based stats.
 Identities = 18/96 (18%), Positives = 34/96 (35%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           ++  ++    L      +Q    NIAN  T G +  S  ++          +   G  V 
Sbjct: 1   MSLLNVGARALMANQIALQTTGHNIANVNTAGYSRQSVAFQTSAGQNIGNGYIGNGADVA 60

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVE 100
            I  + S  +         A+A+   +  ++N L E
Sbjct: 61  TILRNFSELLNRQAAAATAASAADSARSNSLNQLQE 96


>gi|331007440|ref|ZP_08330617.1| Flagellar hook-associated protein flgK [gamma proteobacterium
           IMCC1989]
 gi|330418747|gb|EGG93236.1| Flagellar hook-associated protein flgK [gamma proteobacterium
           IMCC1989]
          Length = 1062

 Score = 37.2 bits (84), Expect = 0.77,   Method: Composition-based stats.
 Identities = 20/98 (20%), Positives = 33/98 (33%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
                ++ SGL V    ++ +  NIANA T G T  S        +   V     G    
Sbjct: 3   SDILGVSISGLRVSQNALRTVGHNIANANTAGYTRQSTDINSMGGTQTGVGFLGNGSYTS 62

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETA 102
            I    + FV          ++   +   N++ L +  
Sbjct: 63  NIERVVNEFVTAQVRQDTTLHSELTIYNQNISQLNDLL 100


>gi|291528559|emb|CBK94145.1| fagellar hook-basal body proteins [Eubacterium rectale M104/1]
          Length = 247

 Score = 37.2 bits (84), Expect = 0.77,   Method: Composition-based stats.
 Identities = 11/50 (22%), Positives = 20/50 (40%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
                  G ++  NVNV+ E  +M    R Y A  + I    + +   ++
Sbjct: 193 SDAEIEQGALETSNVNVVNEMVNMITIQRAYEAGQKVITSIDETLDKAVN 242


>gi|294675565|ref|YP_003576180.1| flagellar hook-associated protein FlgK [Rhodobacter capsulatus SB
           1003]
 gi|294474385|gb|ADE83773.1| flagellar hook-associated protein FlgK [Rhodobacter capsulatus SB
           1003]
          Length = 484

 Score = 37.2 bits (84), Expect = 0.78,   Method: Composition-based stats.
 Identities = 8/38 (21%), Positives = 16/38 (42%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            V+   E   +    + Y AN + ++    M+   LD+
Sbjct: 447 GVDTDYEMQSLLVIEKAYAANAKVVQTIDAMLQELLDI 484



 Score = 34.5 bits (77), Expect = 4.5,   Method: Composition-based stats.
 Identities = 26/132 (19%), Positives = 45/132 (34%), Gaps = 5/132 (3%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG- 60
             + ++ + A SGL   S + +++S NIANA T G          +T+          G 
Sbjct: 1   MSIASAFNFAISGLTASSRKAEVVSSNIANAMTEGYARRELSIASQTLGGTGGGVRILGV 60

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRL-YMANLQTIK 119
            R+    V Q   + +    +  A A    +        ETA         +      + 
Sbjct: 61  NRIVNQVVQQDLLLMDSAAANTTAKADFYNRLETQIGDPETAGSLSATMSDFE---SALL 117

Query: 120 QSHDMMTTTLDL 131
            +  M  +T  L
Sbjct: 118 TAASMPDSTARL 129


>gi|288962677|ref|YP_003452971.1| flagellar basal-body rod protein [Azospirillum sp. B510]
 gi|288914943|dbj|BAI76427.1| flagellar basal-body rod protein [Azospirillum sp. B510]
          Length = 243

 Score = 37.2 bits (84), Expect = 0.78,   Method: Composition-based stats.
 Identities = 13/66 (19%), Positives = 24/66 (36%), Gaps = 1/66 (1%)

Query: 70  QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
                 E  P        G  +  NV  +VE   M +  R Y A  + +    D++ + +
Sbjct: 177 DPPAGLEPRPAPDTRLVEGKTERSNVQGIVEIGRMMDLTRDYQAVTRMVDDGQDLLRSAI 236

Query: 130 D-LLRD 134
           + L + 
Sbjct: 237 NRLGKS 242


>gi|255099438|ref|ZP_05328415.1| flagellar basal body rod protein FlgG [Clostridium difficile
           QCD-63q42]
 gi|255305296|ref|ZP_05349468.1| flagellar basal body rod protein FlgG [Clostridium difficile ATCC
           43255]
          Length = 257

 Score = 37.2 bits (84), Expect = 0.78,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 19/41 (46%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
              ++  NV+++ E  +M   +R Y AN + I+     +  
Sbjct: 208 QSAIESSNVDMVSEINNMMTISREYEANQKIIQAMDSKLAK 248


>gi|299131803|ref|ZP_07024998.1| flagellar hook-associated protein FlgK [Afipia sp. 1NLS2]
 gi|298591940|gb|EFI52140.1| flagellar hook-associated protein FlgK [Afipia sp. 1NLS2]
          Length = 610

 Score = 37.2 bits (84), Expect = 0.78,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 15/38 (39%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             VN+  E A +      Y AN + +    DM  + L 
Sbjct: 571 SGVNIDDEMAHLLALQNAYSANARVMSTVKDMFDSLLQ 608


>gi|240139802|ref|YP_002964279.1| flagellar basal-body rod protein flgF [Methylobacterium extorquens
           AM1]
 gi|240009776|gb|ACS41002.1| flagellar basal-body rod protein flgF [Methylobacterium extorquens
           AM1]
          Length = 246

 Score = 37.2 bits (84), Expect = 0.78,   Method: Composition-based stats.
 Identities = 18/108 (16%), Positives = 36/108 (33%), Gaps = 1/108 (0%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +  +  +  S     +  + +I+ N+AN  TTG    S  ++   +            R 
Sbjct: 1   MQNALFVGVSAQTALARELDVIANNMANVSTTGFKARSSRFQEYLMPVASADSFQRSDRR 60

Query: 64  KKIGVDQ-STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRL 110
               +DQ +       P  P +N   +    +  + V+T       R 
Sbjct: 61  LSYVIDQGTPLDLTQGPVEPDSNPMHVALRGDAFLAVQTPQGLRYTRN 108



 Score = 36.8 bits (83), Expect = 0.93,   Method: Composition-based stats.
 Identities = 19/102 (18%), Positives = 30/102 (29%), Gaps = 6/102 (5%)

Query: 29  IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASG 88
           IA   T     G     R           S G     +   ++         H      G
Sbjct: 145 IAPDGTISTNLGIRGRLRLVTFANAQALKSEG---ANLFSSEAPGRPAGPGAHL---EPG 198

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            ++  NV  +VE   + + NR Y      I +  D+  T + 
Sbjct: 199 ALERSNVKPVVEMTRLMDVNRTYSMVSSVISRLDDLRGTAIR 240


>gi|24459279|gb|AAL86632.1| FlgG [Vibrio fischeri ES114]
          Length = 43

 Score = 37.2 bits (84), Expect = 0.78,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 19/41 (46%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +  +  ++ +GL  Q   +  IS N+ANA T G       +
Sbjct: 1  MNPALWVSKTGLDAQQTNIATISNNLANASTVGFKKSRAVF 41


>gi|251797448|ref|YP_003012179.1| flagellar basal-body rod protein FlgB [Paenibacillus sp. JDR-2]
 gi|247545074|gb|ACT02093.1| flagellar basal-body rod protein FlgB [Paenibacillus sp. JDR-2]
          Length = 132

 Score = 37.2 bits (84), Expect = 0.79,   Method: Composition-based stats.
 Identities = 19/119 (15%), Positives = 38/119 (31%), Gaps = 2/119 (1%)

Query: 14  GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK--IGVDQS 71
            L     R  +++ NIAN  T         +               G R  +  I + ++
Sbjct: 12  ALKASELRQGVVANNIANVDTPNFKRSEVLFEELLSQEMGGQTALQGKRTNERHIPIGRT 71

Query: 72  TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           + +           +       NV++  E + + +    Y   +Q I     MM T ++
Sbjct: 72  SGIVPTAQIQTDNLSEMNNNENNVDIDREMSLLAKNQLSYNFYIQQINHDVKMMKTAIE 130


>gi|149908753|ref|ZP_01897414.1| putative flagellar hook-associated protein [Moritella sp. PE36]
 gi|149808295|gb|EDM68234.1| putative flagellar hook-associated protein [Moritella sp. PE36]
          Length = 443

 Score = 37.2 bits (84), Expect = 0.79,   Method: Composition-based stats.
 Identities = 9/40 (22%), Positives = 19/40 (47%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
             VN+  E   + +  + Y AN + I  +  + +T L ++
Sbjct: 404 SGVNLDEEGISLMKYQQSYNANAKVISMADQLFSTLLRMM 443


>gi|328545575|ref|YP_004305684.1| FlgE protein [polymorphum gilvum SL003B-26A1]
 gi|326415316|gb|ADZ72379.1| FlgE protein [Polymorphum gilvum SL003B-26A1]
          Length = 418

 Score = 37.2 bits (84), Expect = 0.80,   Method: Composition-based stats.
 Identities = 9/48 (18%), Positives = 20/48 (41%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             G ++    +   E + M    + Y A  Q +  S++M  + +  +R
Sbjct: 371 NGGYLEASTTDTSTEFSRMLTAQQAYSAASQILSASNEMFQSLMQAVR 418



 Score = 36.4 bits (82), Expect = 1.5,   Method: Composition-based stats.
 Identities = 19/92 (20%), Positives = 30/92 (32%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            L+ + + A S L  QS  +  +S N+AN++TT     S  +            G    
Sbjct: 1  MSLMGALNSAISSLYAQSQALSNVSSNLANSQTTAYKASSTSFTSLVAGTTSSSSGGVVA 60

Query: 62 RVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
            +    +Q   V      H     SG     
Sbjct: 61 STRSSVSEQGLLVSSSSSTHLAIEGSGFFVVS 92


>gi|289666044|ref|ZP_06487625.1| flagellar basal body rod protein FlgB [Xanthomonas campestris pv.
           vasculorum NCPPB702]
 gi|289670503|ref|ZP_06491578.1| flagellar basal body rod protein FlgB [Xanthomonas campestris pv.
           musacearum NCPPB4381]
          Length = 133

 Score = 37.2 bits (84), Expect = 0.80,   Method: Composition-based stats.
 Identities = 19/129 (14%), Positives = 38/129 (29%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
               +   +    LA++  RM++I+ N++N  T G       +     S +    G    
Sbjct: 3   SPFSSFLGVHGDALALREQRMKLIASNLSNVDTPGYKAKDLNFEAALKSAQGEQDGGLMQ 62

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
                  +               +    +    V+   E A        Y A+L  ++  
Sbjct: 63  TTDAKHYEVGGGSGLNPFQITRESDQPSLDGNTVDPDAERAAYGRAALEYRASLSFLESK 122

Query: 122 HDMMTTTLD 130
              M T + 
Sbjct: 123 VRSMLTAIT 131


>gi|213026536|ref|ZP_03340983.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
          serovar Typhi str. 404ty]
          Length = 110

 Score = 37.2 bits (84), Expect = 0.80,   Method: Composition-based stats.
 Identities = 18/63 (28%), Positives = 25/63 (39%), Gaps = 4/63 (6%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          S   A SGL   +  + +I  NIAN+ T G   G+  +               GV+V  I
Sbjct: 2  SFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFA----DMFAGSKVGLGVKVAGI 57

Query: 67 GVD 69
            D
Sbjct: 58 TQD 60


>gi|83593766|ref|YP_427518.1| hypothetical protein Rru_A2431 [Rhodospirillum rubrum ATCC 11170]
 gi|83576680|gb|ABC23231.1| Protein of unknown function DUF1078 [Rhodospirillum rubrum ATCC
           11170]
          Length = 442

 Score = 37.2 bits (84), Expect = 0.80,   Method: Composition-based stats.
 Identities = 16/119 (13%), Positives = 35/119 (29%), Gaps = 8/119 (6%)

Query: 23  QIISENIANARTTGDTPGSD---PYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDP 79
            +IS NI  +     T  +    P  +  ++  +       +         +        
Sbjct: 324 SLISTNIDASGVLSGTYSNGQTLPLYKLALTDFQANDHLEAIGKNLYRASDAAGESRIFS 383

Query: 80  GHPVANASGIV-----KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
               A+    V     +   V++  + + M  T   Y ++    +   +M  T   L R
Sbjct: 384 ADSAASVGTTVTSGALEQSTVDLGDQFSKMITTQTAYSSSATVFRTCDEMSQTVSGLKR 442


>gi|238799422|ref|ZP_04642851.1| hypothetical protein ymoll0001_16400 [Yersinia mollaretii ATCC
          43969]
 gi|238716726|gb|EEQ08613.1| hypothetical protein ymoll0001_16400 [Yersinia mollaretii ATCC
          43969]
          Length = 549

 Score = 37.2 bits (84), Expect = 0.80,   Method: Composition-based stats.
 Identities = 14/92 (15%), Positives = 33/92 (35%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
           + A SGL+     +  +S NI N +  G    +  + +   +         GV V  + 
Sbjct: 1  MNTAMSGLSAAQYALSTVSNNITNFQVAGYNRQNAIFAQNGGTLSPAGFIGNGVTVTGVN 60

Query: 68 VDQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
           + ++F+          ++     Y  ++ + 
Sbjct: 61 REYNSFITNQLRSSQTQSSGLTTYYQQISQID 92


>gi|213585978|ref|ZP_03367804.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-0664]
          Length = 546

 Score = 37.2 bits (84), Expect = 0.81,   Method: Composition-based stats.
 Identities = 17/99 (17%), Positives = 34/99 (34%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           + +  + A SGL    A +  +S NI N    G T  +    +   +         GV V
Sbjct: 1   MSSLINHAMSGLNAAQAALNTVSNNINNYNVAGYTRQTTILAQANSTLGAGGWIGNGVYV 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETA 102
             +  +   F+     G    ++    +Y  ++ +    
Sbjct: 61  SGVQREYDAFITNQLRGAQNQSSGLTTRYEQMSKIDNLL 99


>gi|110677962|ref|YP_680969.1| flagellar hook-associated protein FlgK [Roseobacter denitrificans
           OCh 114]
 gi|109454078|gb|ABG30283.1| flagellar hook-associated protein FlgK [Roseobacter denitrificans
           OCh 114]
          Length = 481

 Score = 37.2 bits (84), Expect = 0.81,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 19/42 (45%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           V    V+   E   +    + Y AN + I+ + +MM T L +
Sbjct: 440 VLANGVDSDQELQRLLIVEQAYAANARMIEAADEMMQTILRI 481


>gi|89895774|ref|YP_519261.1| hypothetical protein DSY3028 [Desulfitobacterium hafniense Y51]
 gi|89335222|dbj|BAE84817.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 533

 Score = 37.2 bits (84), Expect = 0.81,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 21/77 (27%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M    +   +A   L  Q   +     NIANA T G T      +  +      M     
Sbjct: 1  MRSTFSGLELARRALESQQIALDTTGHNIANANTIGYTRQVVNLQATSPDSIPGMGHYLS 60

Query: 61 VRVKKIGVDQSTFVEEF 77
          +             + F
Sbjct: 61 IGTGVTVQSIERARDIF 77


>gi|163789664|ref|ZP_02184102.1| flagellar hook-associated protein K [Carnobacterium sp. AT7]
 gi|159875196|gb|EDP69262.1| flagellar hook-associated protein K [Carnobacterium sp. AT7]
          Length = 98

 Score = 37.2 bits (84), Expect = 0.82,   Method: Composition-based stats.
 Identities = 21/96 (21%), Positives = 36/96 (37%), Gaps = 2/96 (2%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDP-YRRKTISFEEVMHGSG 59
          M  L  + + A  GL VQ + +Q  S NI+NA T G +            +   +     
Sbjct: 1  MSGLFGTLNNATKGLLVQQSALQTTSHNISNANTEGYSRQKVTMVADNPYTLGGIGQLGT 60

Query: 60 GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNV 95
          GVR+  I      +V      +  ++     +  +V
Sbjct: 61 GVRIASIDRIVDPYVN-NQLRNENSSLEMYSQKSDV 95


>gi|320353947|ref|YP_004195286.1| flagellar hook-associated protein FlgK [Desulfobulbus propionicus
          DSM 2032]
 gi|320122449|gb|ADW17995.1| flagellar hook-associated protein FlgK [Desulfobulbus propionicus
          DSM 2032]
          Length = 465

 Score = 37.2 bits (84), Expect = 0.83,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 27/82 (32%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  LI S +   SG+      +Q+   NI NA T G +  +      T   +  +    G
Sbjct: 1  MGSLITSLYTGASGIFTSQTAIQVTGNNITNAATEGYSRQTAHVTSSTPLTQGGLTYGTG 60

Query: 61 VRVKKIGVDQSTFVEEFDPGHP 82
            V  I      F+        
Sbjct: 61 SAVDAIDRANDAFITRQLMAQS 82



 Score = 36.8 bits (83), Expect = 0.96,   Method: Composition-based stats.
 Identities = 8/39 (20%), Positives = 14/39 (35%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             V+   E   + +    Y A    I    +M+ T L +
Sbjct: 427 SGVSTDEEMVLLIQYQAGYEAASNYISVVKEMLDTLLRM 465


>gi|260429533|ref|ZP_05783510.1| flagellar basal-body rod protein FlgF [Citreicella sp. SE45]
 gi|260420156|gb|EEX13409.1| flagellar basal-body rod protein FlgF [Citreicella sp. SE45]
          Length = 237

 Score = 37.2 bits (84), Expect = 0.83,   Method: Composition-based stats.
 Identities = 10/53 (18%), Positives = 23/53 (43%)

Query: 77  FDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
           ++P        G V+  NV+ +++ A M E  R Y      +++  + +   +
Sbjct: 180 YEPAETPRVMQGFVENSNVDPILQIARMIEVQRAYEMGQSFLQREDERVRAAI 232


>gi|207108815|ref|ZP_03242977.1| flagellar hook protein FlgE [Helicobacter pylori HPKX_438_CA4C1]
          Length = 167

 Score = 37.2 bits (84), Expect = 0.83,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 16/33 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ S     +G+      + I S NIAN  TTG
Sbjct: 1  MLRSLWSGVNGMQAHQIALDIESNNIANVNTTG 33


>gi|83747653|ref|ZP_00944689.1| FlgF [Ralstonia solanacearum UW551]
 gi|207728347|ref|YP_002256741.1| flagellar basal-body rod protein flgf [Ralstonia solanacearum
           MolK2]
 gi|207739736|ref|YP_002258129.1| flagellar basal-body rod protein flgf [Ralstonia solanacearum
           IPO1609]
 gi|300696914|ref|YP_003747575.1| flagellar component of cell-proximal portion of basal-body rod
           [Ralstonia solanacearum CFBP2957]
 gi|83725705|gb|EAP72847.1| FlgF [Ralstonia solanacearum UW551]
 gi|206591593|emb|CAQ57205.1| flagellar basal-body rod protein flgf [Ralstonia solanacearum
           MolK2]
 gi|206593118|emb|CAQ60024.1| flagellar basal-body rod protein flgf [Ralstonia solanacearum
           IPO1609]
 gi|299073638|emb|CBJ53158.1| flagellar component of cell-proximal portion of basal-body rod
           [Ralstonia solanacearum CFBP2957]
          Length = 245

 Score = 37.2 bits (84), Expect = 0.83,   Method: Composition-based stats.
 Identities = 8/44 (18%), Positives = 19/44 (43%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  NV++     +M E +R     ++ +        +  +LLR
Sbjct: 200 LEGSNVSLTDSLVNMIEISRQLELQMKALHTGDTNAQSANELLR 243


>gi|260466622|ref|ZP_05812810.1| flagellar basal body rod protein [Mesorhizobium opportunistum
           WSM2075]
 gi|259029628|gb|EEW30916.1| flagellar basal body rod protein [Mesorhizobium opportunistum
           WSM2075]
          Length = 126

 Score = 37.2 bits (84), Expect = 0.84,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 34/110 (30%), Gaps = 4/110 (3%)

Query: 20  ARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDP 79
            R   I+ NIANA T G T        K +    V   +            + F  +   
Sbjct: 19  VRQSAIAGNIANANTPGYTANDVEPFEKVLDRAAVSLQATQAGHLGSAATNAGFAIKPQE 78

Query: 80  GHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
              V   S      +V +  +     E  R +  N   +K  H MM   +
Sbjct: 79  DDGVVMPS----KNSVVLEDQLLKAGEVRRSFELNTAIVKAFHSMMMMAV 124


>gi|213024454|ref|ZP_03338901.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp.
           enterica serovar Typhi str. 404ty]
          Length = 403

 Score = 37.2 bits (84), Expect = 0.84,   Method: Composition-based stats.
 Identities = 17/99 (17%), Positives = 34/99 (34%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           + +  + A SGL    A +  +S NI N    G T  +    +   +         GV V
Sbjct: 12  MSSLINHAMSGLNAAQAALNTVSNNINNYNVAGYTRQTTILAQANSTLGAGGWIGNGVYV 71

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETA 102
             +  +   F+     G    ++    +Y  ++ +    
Sbjct: 72  SGVQREYDAFITNQLRGAQNQSSGLTTRYEQMSKIDNLL 110


>gi|161503729|ref|YP_001570841.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160865076|gb|ABX21699.1| hypothetical protein SARI_01814 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 553

 Score = 37.2 bits (84), Expect = 0.84,   Method: Composition-based stats.
 Identities = 16/99 (16%), Positives = 34/99 (34%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           + +  + A SGL    + +  +S NI N    G T  +    +   +         GV V
Sbjct: 1   MSSLINHAMSGLNAAQSALNTVSNNINNYNVAGYTRQTTILAQANSTLGAGGWIGNGVYV 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETA 102
             +  +   F+     G    ++    +Y  ++ +    
Sbjct: 61  SGVQREYDAFITNQLRGAQNQSSGLTTRYEQMSKIDNLL 99


>gi|149912829|ref|ZP_01901363.1| flagellar basal-body rod protein; FlgB [Roseobacter sp. AzwK-3b]
 gi|149813235|gb|EDM73061.1| flagellar basal-body rod protein; FlgB [Roseobacter sp. AzwK-3b]
          Length = 129

 Score = 37.2 bits (84), Expect = 0.84,   Method: Composition-based stats.
 Identities = 18/113 (15%), Positives = 35/113 (30%), Gaps = 3/113 (2%)

Query: 18  QSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEF 77
              R  +I++N+AN+ T G            I  +     S   RV  +         + 
Sbjct: 18  AGTRQAVIAQNLANSDTPGYAARDVAPFSTLIGTDAPQFTSKATRVTHLNASSGPLQIDV 77

Query: 78  DPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            P +            +V+V  E        R +   +   K +  ++ T + 
Sbjct: 78  SPRNDAQTDPN---GNSVSVESEMLHAVSVKRQHDRAVAIYKSALGLLRTAVS 127


>gi|50403744|sp|P50611|FLGE_HELMU RecName: Full=Flagellar hook protein flgE
          Length = 454

 Score = 37.2 bits (84), Expect = 0.84,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 16/33 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ S     SG+      + + S NIAN  TTG
Sbjct: 1  MLRSLWSGVSGMQAHQVALDVESNNIANVNTTG 33


>gi|146293684|ref|YP_001184108.1| flagellar hook-associated protein FlgK [Shewanella putrefaciens
           CN-32]
 gi|145565374|gb|ABP76309.1| flagellar hook-associated protein FlgK [Shewanella putrefaciens
           CN-32]
          Length = 641

 Score = 37.2 bits (84), Expect = 0.84,   Method: Composition-based stats.
 Identities = 16/101 (15%), Positives = 30/101 (29%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           I   +IA +G+    +++ + S NIANA T G                       G  V 
Sbjct: 3   IDLLNIARTGVLASQSQLGVTSNNIANANTAGYHRQVATQSTLESQRFGNSFYGTGTYVD 62

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
            +    + +            +     Y  ++ L +     
Sbjct: 63  DVKRIYNDYAARELRIGQTTLSGAEASYGKLSELDQLFSQI 103



 Score = 34.5 bits (77), Expect = 5.5,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 19/41 (46%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             VN+  E A++    + Y A+ + +  +  +  T L  +R
Sbjct: 601 SGVNLDEEAANLMRFQQAYQASARIMTTAQQIFDTLLTSVR 641


>gi|319427083|gb|ADV55157.1| flagellar hook-associated protein FlgK [Shewanella putrefaciens
           200]
          Length = 641

 Score = 37.2 bits (84), Expect = 0.85,   Method: Composition-based stats.
 Identities = 16/101 (15%), Positives = 30/101 (29%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           I   +IA +G+    +++ + S NIANA T G                       G  V 
Sbjct: 3   IDLLNIARTGVLASQSQLGVTSNNIANANTAGYHRQVATQSTLESQRFGNSFYGTGTYVD 62

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
            +    + +            +     Y  ++ L +     
Sbjct: 63  DVKRIYNDYAARELRIGQTTLSGAEASYGKLSELDQLFSQI 103



 Score = 34.5 bits (77), Expect = 5.4,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 19/41 (46%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             VN+  E A++    + Y A+ + +  +  +  T L  +R
Sbjct: 601 SGVNLDEEAANLMRFQQAYQASARIMTTAQQIFDTLLTSVR 641


>gi|21231400|ref|NP_637317.1| flagellar basal body rod protein FlgB [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66768547|ref|YP_243309.1| flagellar basal body rod protein FlgB [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|21113066|gb|AAM41241.1| flagellar protein [Xanthomonas campestris pv. campestris str. ATCC
           33913]
 gi|66573879|gb|AAY49289.1| flagellar protein [Xanthomonas campestris pv. campestris str. 8004]
          Length = 133

 Score = 37.2 bits (84), Expect = 0.85,   Method: Composition-based stats.
 Identities = 20/129 (15%), Positives = 38/129 (29%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
               +   I    L ++  RM++I+ N++N  T G       +     + E V  G    
Sbjct: 3   SPFTSFLGIHGDALTLREQRMKLIASNLSNVDTPGYKAKDLNFEAALKAAEGVRDGGLMQ 62

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
                  +  +                 +    V+   E A        Y A+L  ++  
Sbjct: 63  ATDAKHYEIGSTAGLNPFQITREADQPSLDGNTVDPDAERAAYGRAALEYRASLSFLESK 122

Query: 122 HDMMTTTLD 130
              M T + 
Sbjct: 123 VRSMLTAIT 131


>gi|149189837|ref|ZP_01868117.1| putative flagellar basal-body rod protein [Vibrio shilonii AK1]
 gi|148836323|gb|EDL53280.1| putative flagellar basal-body rod protein [Vibrio shilonii AK1]
          Length = 243

 Score = 37.2 bits (84), Expect = 0.85,   Method: Composition-based stats.
 Identities = 6/46 (13%), Positives = 19/46 (41%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
              ++  NV+ + E   +    R +   ++ +K +  +  +   L+
Sbjct: 195 PEHIEGSNVSAIDELLSVMSLTRNFEMQIRMMKTAETLAQSGNKLM 240


>gi|114330362|ref|YP_746584.1| flagellar basal body rod protein FlgF [Nitrosomonas eutropha C91]
 gi|114307376|gb|ABI58619.1| flagellar basal-body rod protein FlgF [Nitrosomonas eutropha C91]
          Length = 247

 Score = 37.2 bits (84), Expect = 0.85,   Method: Composition-based stats.
 Identities = 10/57 (17%), Positives = 22/57 (38%)

Query: 76  EFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           E      VA   G ++  NVN + E   M    R +   ++ ++ +        +++
Sbjct: 187 EAPASGKVALIDGALESSNVNAVSEMVKMITLARQFDMQMKMLENAQQNAQQASEIM 243


>gi|226320912|ref|ZP_03796463.1| flagellar hook-associated protein FlgK [Borrelia burgdorferi
          29805]
 gi|226233684|gb|EEH32414.1| flagellar hook-associated protein FlgK [Borrelia burgdorferi
          29805]
          Length = 358

 Score = 37.2 bits (84), Expect = 0.86,   Method: Composition-based stats.
 Identities = 13/80 (16%), Positives = 24/80 (30%), Gaps = 7/80 (8%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDP-------YRRKTISFEE 53
          MD   +   I    L      M  +  N++NA   G +            Y  +    ++
Sbjct: 1  MDSTFSGIEIGKRSLFAHKDAMNTVGHNLSNATKPGYSRQRVTMKTEIPLYAPQLNRAKK 60

Query: 54 VMHGSGGVRVKKIGVDQSTF 73
                G+ V+ I   +   
Sbjct: 61 QGQLGQGIVVQSIDRVKDEL 80


>gi|188534169|ref|YP_001907966.1| flagellar basal body rod protein FlgF [Erwinia tasmaniensis Et1/99]
 gi|188029211|emb|CAO97083.1| Flagellar basal-body rod protein [Erwinia tasmaniensis Et1/99]
          Length = 251

 Score = 37.2 bits (84), Expect = 0.86,   Method: Composition-based stats.
 Identities = 11/102 (10%), Positives = 26/102 (25%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           N     +        +   +    +        +     Q+      +    +    G++
Sbjct: 147 NPGDPPNATVQLGRLKLVQARGNELTRGDDGMFRVSASTQAQRGATLEADPAMKVMPGVL 206

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NV       DM    R +   ++ I    +       LL
Sbjct: 207 EGSNVKATQTMVDMIANARRFEMQMKVISSVDENEQKANQLL 248


>gi|148980296|ref|ZP_01815983.1| putative flagellar hook-associated protein [Vibrionales bacterium
           SWAT-3]
 gi|145961315|gb|EDK26625.1| putative flagellar hook-associated protein [Vibrionales bacterium
           SWAT-3]
          Length = 459

 Score = 37.2 bits (84), Expect = 0.86,   Method: Composition-based stats.
 Identities = 12/38 (31%), Positives = 17/38 (44%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             VN   E A+M      Y AN++ I  ++ M  T L 
Sbjct: 420 SAVNSDEEAANMLLYLNAYEANMKIISTANQMFQTLLR 457


>gi|531461|gb|AAA67879.1| orfF [Bacillus subtilis subsp. subtilis str. 168]
          Length = 271

 Score = 37.2 bits (84), Expect = 0.86,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 18/42 (42%), Gaps = 1/42 (2%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSH-DMMTTTLDLLR 133
            NV+V     +M E  R + AN + I+     M     ++ +
Sbjct: 229 SNVDVTSAYTEMTEAYRSFEANQKVIQAYDKSMDKAANEIGK 270



 Score = 36.8 bits (83), Expect = 0.97,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 20/39 (51%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSD 42
          ++   + A S +  Q  R +++S NIANA T+G      
Sbjct: 1  MLKGLYTATSAMIAQQRRTEMLSNNIANANTSGYKADQG 39


>gi|15616183|ref|NP_244488.1| flagellar hook-associated protein FlgK [Bacillus halodurans C-125]
 gi|10176245|dbj|BAB07340.1| flagellar hook-associated protein 1 (HAP1) [Bacillus halodurans
           C-125]
          Length = 556

 Score = 37.2 bits (84), Expect = 0.86,   Method: Composition-based stats.
 Identities = 19/106 (17%), Positives = 33/106 (31%), Gaps = 7/106 (6%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG----- 59
                 A  G+  Q A ++ +  NIANA T G T     + +         +        
Sbjct: 6   FHGLETARRGMMTQQAALRTVGHNIANANTPGYTRQRVNFVQTQAYPGVGRNAPSIPGQV 65

Query: 60  --GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETAD 103
             GV    I   +  F++     H   N     +   +  + E  +
Sbjct: 66  GTGVMAGSIQRIRDAFLDLQYRQHNTQNGYWDARADALIRMEEILN 111



 Score = 36.8 bits (83), Expect = 1.1,   Method: Composition-based stats.
 Identities = 8/38 (21%), Positives = 16/38 (42%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             V++  E   M +    Y A  + I Q  +M+   ++
Sbjct: 512 SQVSLDEEMTLMIQFQHAYNAAARNITQIDEMLDRIIN 549


>gi|312879580|ref|ZP_07739380.1| flagellar basal-body rod protein FlgB [Aminomonas paucivorans DSM
           12260]
 gi|310782871|gb|EFQ23269.1| flagellar basal-body rod protein FlgB [Aminomonas paucivorans DSM
           12260]
          Length = 134

 Score = 37.2 bits (84), Expect = 0.87,   Method: Composition-based stats.
 Identities = 24/121 (19%), Positives = 38/121 (31%), Gaps = 2/121 (1%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFV 74
           L   S RM   ++N+ANA T         +  +  +  E              +      
Sbjct: 14  LEGLSRRMGSTTQNLANANTPKYVRREVSFEDQLEALIEAPRRLPLAVTDGHHMTNMPKG 73

Query: 75  EEFD-PGHPVANASGIVKYPN-VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
            EF  P              N V+   E A + ET  +Y A  + + +   M  T +   
Sbjct: 74  IEFVHPVESRVGNEVYRYDENNVDPETELARLAETRMMYQAMTRILGRKLSMYRTAIGGG 133

Query: 133 R 133
           R
Sbjct: 134 R 134


>gi|331652135|ref|ZP_08353154.1| flagellar hook-associated protein FlgK [Escherichia coli M718]
 gi|331050413|gb|EGI22471.1| flagellar hook-associated protein FlgK [Escherichia coli M718]
          Length = 547

 Score = 37.2 bits (84), Expect = 0.87,   Method: Composition-based stats.
 Identities = 15/110 (13%), Positives = 35/110 (31%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           + +  + A SGL    A +   S NI++    G T  +    +   +         GV V
Sbjct: 1   MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIVAQANSTLGAGGWVGNGVYV 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
             +  +   F+          ++    +Y  ++ +        ++     
Sbjct: 61  SGVQREYDAFITNQLRAAQTQSSGLTARYEQMSKIDNMLSTSTSSLATQM 110


>gi|312115282|ref|YP_004012878.1| flagellar basal-body rod protein FlgF [Rhodomicrobium vannielii
          ATCC 17100]
 gi|311220411|gb|ADP71779.1| flagellar basal-body rod protein FlgF [Rhodomicrobium vannielii
          ATCC 17100]
          Length = 241

 Score = 37.2 bits (84), Expect = 0.87,   Method: Composition-based stats.
 Identities = 13/87 (14%), Positives = 32/87 (36%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          + +S ++A S       R+  +++N+ANA T G       +     + +  M      + 
Sbjct: 1  MQSSLYVALSAQVALQKRLDTVAQNVANANTVGYRGTEMKFDSVLSAADAQMTAFVTSKD 60

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIV 90
            + +     ++  +P        G +
Sbjct: 61 GVVSLGAGGLIKTGNPLDVALKGQGWL 87



 Score = 33.7 bits (75), Expect = 9.0,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 29/69 (42%), Gaps = 1/69 (1%)

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
           RV+   +     +   DP    + ASG V+  NVN + ETA +    R +     TI+  
Sbjct: 167 RVEGGFIADKPAIAATDP-AKSSMASGYVEESNVNAIKETARLIYVQRAFDEAASTIQSV 225

Query: 122 HDMMTTTLD 130
              + + + 
Sbjct: 226 ESGLKSAIQ 234


>gi|229542505|ref|ZP_04431565.1| protein of unknown function DUF1078 domain protein [Bacillus
           coagulans 36D1]
 gi|229326925|gb|EEN92600.1| protein of unknown function DUF1078 domain protein [Bacillus
           coagulans 36D1]
          Length = 276

 Score = 37.2 bits (84), Expect = 0.87,   Method: Composition-based stats.
 Identities = 16/103 (15%), Positives = 39/103 (37%)

Query: 29  IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASG 88
           +A +  T ++      + +     E +  +     + +                ++   G
Sbjct: 172 VAYSDGTRESFNLGVVQMRNPQVLEQVGNNLLRLPQNVNAANVYTDLTGATRSQISMQQG 231

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +++  NV++  E  ++ +T RLY    +TI  S  MM    ++
Sbjct: 232 VLEKSNVDLSTEITELTKTERLYQFQSKTITLSDQMMGLVNNI 274


>gi|163852465|ref|YP_001640508.1| flagellar basal body rod protein FlgF [Methylobacterium extorquens
           PA1]
 gi|163664070|gb|ABY31437.1| flagellar basal body rod protein [Methylobacterium extorquens PA1]
          Length = 246

 Score = 37.2 bits (84), Expect = 0.87,   Method: Composition-based stats.
 Identities = 19/102 (18%), Positives = 30/102 (29%), Gaps = 6/102 (5%)

Query: 29  IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASG 88
           IA   T     G     R           S G     +   ++         H      G
Sbjct: 145 IAPDGTISTNLGIRGRLRLVTFPNAQALKSEG---ANLFSSEAPARPAGPGAHL---EPG 198

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            ++  NV  +VE   + + NR Y      I +  D+  T + 
Sbjct: 199 ALERSNVKPVVEMTRLMDVNRTYSMVSSVISRLDDLRGTAIR 240



 Score = 36.0 bits (81), Expect = 1.7,   Method: Composition-based stats.
 Identities = 15/95 (15%), Positives = 30/95 (31%), Gaps = 8/95 (8%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +  +  +  S     +  + +I+ N+AN  TTG    S  ++   +            R 
Sbjct: 1  MQNALFVGVSAQTALARELDVIANNMANVSTTGFKARSARFQEYLMPVASADSFQRSDRR 60

Query: 64 KKIGVDQSTF--------VEEFDPGHPVANASGIV 90
              +DQ T           + +P H        +
Sbjct: 61 LSYVIDQGTPLDLTQGSVEPDSNPMHVALRGDAFL 95


>gi|326404070|ref|YP_004284152.1| flagellar basal-body rod protein FlgF [Acidiphilium multivorum
           AIU301]
 gi|325050932|dbj|BAJ81270.1| flagellar basal-body rod protein FlgF [Acidiphilium multivorum
           AIU301]
          Length = 247

 Score = 37.2 bits (84), Expect = 0.88,   Method: Composition-based stats.
 Identities = 11/54 (20%), Positives = 20/54 (37%)

Query: 77  FDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             P        G ++  NV  +VE  +M + +R Y    Q +    +   T + 
Sbjct: 186 PIPDPNPQIVQGAIEESNVQPVVEITNMIQASRNYEMLAQFLASEKNRSQTAIS 239


>gi|156976147|ref|YP_001447053.1| flagellar hook-associated protein [Vibrio harveyi ATCC BAA-1116]
 gi|156527741|gb|ABU72826.1| hypothetical protein VIBHAR_04918 [Vibrio harveyi ATCC BAA-1116]
          Length = 457

 Score = 37.2 bits (84), Expect = 0.88,   Method: Composition-based stats.
 Identities = 15/69 (21%), Positives = 24/69 (34%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          +   +IA SGL      + + ++N+AN  T G +                +    GV V 
Sbjct: 1  MNLVNIALSGLNANRVALDVTAQNVANIITPGYSRQQALMTSVGDGKYNKLSPGMGVEVT 60

Query: 65 KIGVDQSTF 73
           I      F
Sbjct: 61 SIRRVTDQF 69


>gi|145298488|ref|YP_001141329.1| flagellar basal body protein FlgB [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|142851260|gb|ABO89581.1| flagellar basal body protein FlgB [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 132

 Score = 37.2 bits (84), Expect = 0.88,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 41/114 (35%), Gaps = 2/114 (1%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
            +  I    L V+S R +++S NIANA T G       +       +           +K
Sbjct: 7   KAFGIHQYTLGVRSKRAEVLSSNIANADTPGFKARDINFSEALAQAQHQQGFGMATTSEK 66

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
               QS         +P+   +G      V+V  E ++    +  Y  +L+ + 
Sbjct: 67  HFALQSDAPGLMQYRNPLQPDTG--DGNTVDVQQERSEFLRNSLEYQTSLEFMN 118


>gi|326319501|ref|YP_004237173.1| flagellar basal body rod protein [Acidovorax avenae subsp. avenae
           ATCC 19860]
 gi|323376337|gb|ADX48606.1| flagellar basal body rod protein [Acidovorax avenae subsp. avenae
           ATCC 19860]
          Length = 100

 Score = 37.2 bits (84), Expect = 0.89,   Method: Composition-based stats.
 Identities = 22/117 (18%), Positives = 36/117 (30%), Gaps = 30/117 (25%)

Query: 14  GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTF 73
           GL     ++   + N+AN  T G         R+    +  +   GGV  +     Q   
Sbjct: 11  GLRAAQLQLDTSAHNVANMNTEG--------FRRQTVEQSAVPDQGGVEARVGRAAQE-- 60

Query: 74  VEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
                                 +   +  D       + ANLQT+K    M+ + LD
Sbjct: 61  --------------------GASPEADAVDQMSATYAFSANLQTLKTEDRMLGSLLD 97


>gi|146281772|ref|YP_001171925.1| flagellar basal-body rod protein FlgF [Pseudomonas stutzeri A1501]
 gi|145569977|gb|ABP79083.1| flagellar basal-body rod protein FlgF [Pseudomonas stutzeri A1501]
          Length = 203

 Score = 37.2 bits (84), Expect = 0.89,   Method: Composition-based stats.
 Identities = 9/38 (23%), Positives = 20/38 (52%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
            SG ++  NVN + E   M   +R +  +++ ++ + D
Sbjct: 154 TSGFLEASNVNAVAEMTSMLALSRQFELHVKMMRTAED 191


>gi|262273522|ref|ZP_06051336.1| flagellar hook-associated protein FlgK [Grimontia hollisae CIP
           101886]
 gi|262222500|gb|EEY73811.1| flagellar hook-associated protein FlgK [Grimontia hollisae CIP
           101886]
          Length = 464

 Score = 37.2 bits (84), Expect = 0.90,   Method: Composition-based stats.
 Identities = 8/39 (20%), Positives = 19/39 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN+  E   + +  ++Y AN + I  +  ++  T+ +
Sbjct: 424 SGVNLDEEAVSLMQFTQMYQANAKVISTAQQLLDITMGM 462


>gi|329849713|ref|ZP_08264559.1| flagellar basal-body rod protein FlgF [Asticcacaulis biprosthecum
           C19]
 gi|328841624|gb|EGF91194.1| flagellar basal-body rod protein FlgF [Asticcacaulis biprosthecum
           C19]
          Length = 249

 Score = 36.8 bits (83), Expect = 0.90,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 1/58 (1%)

Query: 77  FDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD-LLR 133
             P        G ++  NVN ++E   + E NR Y      I+Q HD+  + ++ L R
Sbjct: 190 PVPATDARVRQGFLEASNVNPMIEVTKLIEINRAYTTLAGIIQQQHDLNKSAVERLGR 247


>gi|296390550|ref|ZP_06880025.1| flagellar hook-associated protein FlgK [Pseudomonas aeruginosa
           PAb1]
          Length = 683

 Score = 36.8 bits (83), Expect = 0.90,   Method: Composition-based stats.
 Identities = 19/123 (15%), Positives = 35/123 (28%), Gaps = 6/123 (4%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +     I  SGL      + I   NI N +T G +      + +   F    +   G ++
Sbjct: 1   MSDLLSIGLSGLGTSQTWLTITGHNITNVKTPGYSRQDAIQQTRIPQFSGAGYMGSGSQI 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET------NRLYMANLQT 117
             +    S F+          N+        ++ L        T       R + A    
Sbjct: 61  VDVRRLASDFLTGQLRNATSQNSELNAFLGQIDQLNSLLADNTTGVSPAMQRFFSALQTA 120

Query: 118 IKQ 120
            + 
Sbjct: 121 AQN 123



 Score = 34.8 bits (78), Expect = 4.0,   Method: Composition-based stats.
 Identities = 17/104 (16%), Positives = 34/104 (32%), Gaps = 6/104 (5%)

Query: 28  NIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHP--VAN 85
           N  N       P        T S     + + G  V+++G   +      D         
Sbjct: 580 NALNLNALQTKPTVG----GTGSTGSTYNDAYGGLVERVGTLTAQARASADASQTVLKQA 635

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
                    V++  E A++ +  + Y A+ Q I+ +  +  T +
Sbjct: 636 QDSRDSLSGVSLDEEAANLIQFQQYYSASAQVIQVARSLFDTLI 679


>gi|226314925|ref|YP_002774821.1| flagellar hook-associated protein 1 [Brevibacillus brevis NBRC
           100599]
 gi|226097875|dbj|BAH46317.1| flagellar hook-associated protein 1 [Brevibacillus brevis NBRC
           100599]
          Length = 495

 Score = 36.8 bits (83), Expect = 0.90,   Method: Composition-based stats.
 Identities = 23/134 (17%), Positives = 43/134 (32%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M        ++  GL  Q + +     NI+NA T G +      +  T      M  S  
Sbjct: 1   MRSTFHGIEVSKRGLFAQQSALNTTGHNISNANTEGYSRQRVNMQATTGLPYVGMQASIE 60

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
             +   GV  ++     +    +   +   +    +  +ET +  E      ++    K 
Sbjct: 61  PGLLGTGVQATSIQRLREEFLDIQYRNEYKRQGYWDGRLETLEKLEGIMNEPSDTGLQKV 120

Query: 121 SHDMMTTTLDLLRD 134
              M     DL +D
Sbjct: 121 MDQMWQAWQDLAKD 134



 Score = 34.8 bits (78), Expect = 3.7,   Method: Composition-based stats.
 Identities = 7/42 (16%), Positives = 20/42 (47%), Gaps = 1/42 (2%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD-LLR 133
             V++  E A+M +    Y A+ + +    +++   ++ + R
Sbjct: 451 SGVSIDDEMAEMVKYQHAYSASARVMTSMDEILDKVINGMGR 492


>gi|170748653|ref|YP_001754913.1| flagellar basal body rod protein FlgB [Methylobacterium
           radiotolerans JCM 2831]
 gi|170655175|gb|ACB24230.1| flagellar basal body rod protein [Methylobacterium radiotolerans
           JCM 2831]
          Length = 133

 Score = 36.8 bits (83), Expect = 0.90,   Method: Composition-based stats.
 Identities = 18/120 (15%), Positives = 32/120 (26%), Gaps = 2/120 (1%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFV 74
           +    AR  +I+EN+ANA   G  P      R   +   +      + +   G       
Sbjct: 16  MQWAQARQGVIAENVANADMPGFKPRDLVEPRFDRATGALATTGSSLTLTSAGHMAPPGQ 75

Query: 75  EEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
                               VN+  E     E    Y       + S   +   + + + 
Sbjct: 76  SVGADSKRAKGFEIRPSGNGVNLEDEMMKAGENQSDYQLAASLYQHSLTTLK--IAIGKS 133


>gi|5361014|gb|AAD42921.1|U12817_15 polar flagellar hook associated protein type 1 [Vibrio
           parahaemolyticus]
          Length = 658

 Score = 36.8 bits (83), Expect = 0.90,   Method: Composition-based stats.
 Identities = 21/120 (17%), Positives = 35/120 (29%), Gaps = 1/120 (0%)

Query: 13  SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQST 72
           S L  Q   +     NI+N  T G +  S                  GV V+ +      
Sbjct: 24  SVLTAQRQ-LNTTGHNISNVNTEGYSRQSVIQGTNDPRMFGGSTYGMGVHVENVRRSWDQ 82

Query: 73  FVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           F          +NA+      N+++L        + ++     +       M  T  DL 
Sbjct: 83  FAVNELNLSSTSNANKTDTQDNLDMLSSMLSSVASKKIPENLNEWFDAVKTMADTPNDLG 142



 Score = 34.8 bits (78), Expect = 3.8,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 22/39 (56%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN+  E A+M +  + YMA+ + ++ ++D   T L L
Sbjct: 619 AGVNLDEEAANMMKFQQAYMASSRVMQAANDTFNTILQL 657


>gi|238794003|ref|ZP_04637621.1| hypothetical protein yinte0001_21180 [Yersinia intermedia ATCC
          29909]
 gi|238726635|gb|EEQ18171.1| hypothetical protein yinte0001_21180 [Yersinia intermedia ATCC
          29909]
          Length = 555

 Score = 36.8 bits (83), Expect = 0.91,   Method: Composition-based stats.
 Identities = 14/92 (15%), Positives = 33/92 (35%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
           + A SGL+     +  +S NI N +  G    +  + +   +         GV V  + 
Sbjct: 6  MNTAMSGLSAAQYALSTVSNNITNFQVAGYNRQNTIFAQNGGTLSPAGFIGNGVAVTGVN 65

Query: 68 VDQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
           + ++F+          ++     Y  ++ + 
Sbjct: 66 REYNSFITNQLRSSQTQSSGLTTYYQQISQID 97


>gi|115523523|ref|YP_780434.1| flagellar hook-associated protein [Rhodopseudomonas palustris
           BisA53]
 gi|115517470|gb|ABJ05454.1| flagellar hook-associated protein FlgK [Rhodopseudomonas palustris
           BisA53]
          Length = 629

 Score = 36.8 bits (83), Expect = 0.91,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 16/38 (42%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             VN+  E A +      Y AN + +   +DM  T + 
Sbjct: 590 SGVNMDEEMAHLLALQNAYSANARVMSTVNDMYKTLMQ 627



 Score = 35.2 bits (79), Expect = 2.8,   Method: Composition-based stats.
 Identities = 26/88 (29%), Positives = 36/88 (40%), Gaps = 7/88 (7%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            L  +  IA +GL    A M ++S N+ANA T G       Y RKTI       GS G 
Sbjct: 1  MSLGDALSIAMAGLRANQASMSLVSSNVANAETPG-------YVRKTIDQVTTNSGSVGS 53

Query: 62 RVKKIGVDQSTFVEEFDPGHPVANASGI 89
           V+  GV++              + +G 
Sbjct: 54 GVRVYGVNRQLDEYIQAQVRTETSGAGY 81


>gi|258592553|emb|CBE68862.1| putative Flagellar hook-associated protein 1 (HAP1) [NC10 bacterium
           'Dutch sediment']
          Length = 466

 Score = 36.8 bits (83), Expect = 0.92,   Method: Composition-based stats.
 Identities = 26/106 (24%), Positives = 30/106 (28%), Gaps = 6/106 (5%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M  L AS  +A   L  Q   +Q    NIANA T G T      R++      V    G 
Sbjct: 1   MISLQASLTMARKALQAQQVAIQTTGHNIANANTPGFT------RQRVDLTPAVPFSLGS 54

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
           V     GVD        D                      T    E
Sbjct: 55  VGSLGTGVDIKDITRIRDLLLDSQFRDAHQALSRQEAEEATLSQIE 100



 Score = 34.5 bits (77), Expect = 5.3,   Method: Composition-based stats.
 Identities = 9/44 (20%), Positives = 18/44 (40%), Gaps = 1/44 (2%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL-DLLR 133
           +   V++  E  D+    + Y A        +D++ T +  L R
Sbjct: 423 QASGVSLDEEMTDLIRFQKAYEAAAHFANVVNDLLGTLMSQLGR 466


>gi|86750895|ref|YP_487391.1| flagellar basal body rod protein FlgF [Rhodopseudomonas palustris
           HaA2]
 gi|86573923|gb|ABD08480.1| Flagellar basal body rod protein [Rhodopseudomonas palustris HaA2]
          Length = 253

 Score = 36.8 bits (83), Expect = 0.92,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 33/105 (31%)

Query: 26  SENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVAN 85
           + NIA         G+            V         K+     +   +   P      
Sbjct: 142 AINIAQDGNVSVVEGTATIDSLRGKLRLVSFARPQSLEKQGDNLFAATSDPGAPDTKAIV 201

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             G V+  NVN ++E   M +  R Y      ++Q  D+  T ++
Sbjct: 202 RQGYVEKSNVNSVLEMTRMLDVTRSYQKMSSLLQQEGDLQKTAIE 246


>gi|304412507|ref|ZP_07394113.1| fagellar hook-basal body protein [Shewanella baltica OS183]
 gi|307307166|ref|ZP_07586904.1| fagellar hook-basal body protein [Shewanella baltica BA175]
 gi|304349149|gb|EFM13561.1| fagellar hook-basal body protein [Shewanella baltica OS183]
 gi|306910405|gb|EFN40836.1| fagellar hook-basal body protein [Shewanella baltica BA175]
          Length = 244

 Score = 36.8 bits (83), Expect = 0.93,   Method: Composition-based stats.
 Identities = 9/49 (18%), Positives = 21/49 (42%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
            SG ++  NV  + E     + +R +   ++ +K +  +      LL +
Sbjct: 195 DSGFLESSNVQAVSELIASMDLSRQFEIQVKLMKSAEKLAEAGNRLLGN 243


>gi|224534099|ref|ZP_03674682.1| flagellar hook-associated protein FlgK [Borrelia burgdorferi
          CA-11.2a]
 gi|224512798|gb|EEF83166.1| flagellar hook-associated protein FlgK [Borrelia burgdorferi
          CA-11.2a]
          Length = 388

 Score = 36.8 bits (83), Expect = 0.94,   Method: Composition-based stats.
 Identities = 13/80 (16%), Positives = 24/80 (30%), Gaps = 7/80 (8%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDP-------YRRKTISFEE 53
          MD   +   I    L      M  +  N++NA   G +            Y  +    ++
Sbjct: 1  MDSTFSGIEIGKRSLFAHKDAMNTVGHNLSNATKPGYSRQRVTMKTEIPLYAPQLNRAKK 60

Query: 54 VMHGSGGVRVKKIGVDQSTF 73
                G+ V+ I   +   
Sbjct: 61 QGQLGQGIVVQSIDRVKDEL 80


>gi|207728352|ref|YP_002256746.1| flagellar hook-associated protein 1 [Ralstonia solanacearum MolK2]
 gi|206591598|emb|CAQ57210.1| flagellar hook-associated protein 1 [Ralstonia solanacearum MolK2]
          Length = 642

 Score = 36.8 bits (83), Expect = 0.94,   Method: Composition-based stats.
 Identities = 18/131 (13%), Positives = 42/131 (32%), Gaps = 5/131 (3%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV- 63
                ++ SG    +     +S N AN+    +       R  T+        S G    
Sbjct: 510 FNGIQMSLSGTPATNDTF-TVSANTANSTDGHNASAFAQLRNATVLDNGTTSISSGWSNL 568

Query: 64  ---KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
                I   Q++           ++ +       VN+  E   + +  + Y A  + ++ 
Sbjct: 569 VTQVGIQSSQASANLTSQKSLLASSTAQQQSVSGVNLDDEAMSLMKYQQAYQAAAKVMQT 628

Query: 121 SHDMMTTTLDL 131
           ++ +  + L +
Sbjct: 629 ANSLFDSLLSI 639



 Score = 36.8 bits (83), Expect = 1.1,   Method: Composition-based stats.
 Identities = 17/81 (20%), Positives = 27/81 (33%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
           +IA +GL      +Q+   NIANA T G +                 +   GV V  + 
Sbjct: 6  LNIAATGLRAADVNLQVTGNNIANASTAGYSRQEAVQTENIPMATGAGYLGQGVNVTTVK 65

Query: 68 VDQSTFVEEFDPGHPVANASG 88
               F+         A ++ 
Sbjct: 66 RIYDQFLTAQVQSGQAATSAA 86


>gi|83747648|ref|ZP_00944684.1| FlgK [Ralstonia solanacearum UW551]
 gi|207739731|ref|YP_002258124.1| flagellar hook-associated protein 1 [Ralstonia solanacearum
           IPO1609]
 gi|83725700|gb|EAP72842.1| FlgK [Ralstonia solanacearum UW551]
 gi|206593113|emb|CAQ60019.1| flagellar hook-associated protein 1 [Ralstonia solanacearum
           IPO1609]
          Length = 642

 Score = 36.8 bits (83), Expect = 0.94,   Method: Composition-based stats.
 Identities = 18/131 (13%), Positives = 42/131 (32%), Gaps = 5/131 (3%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV- 63
                ++ SG    +     +S N AN+    +       R  T+        S G    
Sbjct: 510 FNGIQMSLSGTPATNDTF-TVSANTANSTDGHNASAFAQLRNATVLDNGTTSISSGWSNL 568

Query: 64  ---KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
                I   Q++           ++ +       VN+  E   + +  + Y A  + ++ 
Sbjct: 569 VTQVGIQSSQASANLTSQKSLLASSTAQQQSVSGVNLDDEAMSLMKYQQAYQAAAKVMQT 628

Query: 121 SHDMMTTTLDL 131
           ++ +  + L +
Sbjct: 629 ANSLFDSLLSI 639



 Score = 36.8 bits (83), Expect = 1.1,   Method: Composition-based stats.
 Identities = 17/81 (20%), Positives = 27/81 (33%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
           +IA +GL      +Q+   NIANA T G +                 +   GV V  + 
Sbjct: 6  LNIAATGLRAADVNLQVTGNNIANASTAGYSRQEAVQTENIPMATGAGYLGQGVNVTTVK 65

Query: 68 VDQSTFVEEFDPGHPVANASG 88
               F+         A ++ 
Sbjct: 66 RIYDQFLTAQVQSGQAATSAA 86


>gi|296135672|ref|YP_003642914.1| flagellar basal-body rod protein FlgF [Thiomonas intermedia K12]
 gi|295795794|gb|ADG30584.1| flagellar basal-body rod protein FlgF [Thiomonas intermedia K12]
          Length = 245

 Score = 36.8 bits (83), Expect = 0.95,   Method: Composition-based stats.
 Identities = 15/103 (14%), Positives = 32/103 (31%)

Query: 30  ANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGI 89
           A+   +G   GS P     I+  ++++       +                  V  A G 
Sbjct: 140 ADGTISGVPVGSQPNALVVINRIQLVNPPPAQMQRGADGLFRDTQGPAPADGNVQLAVGA 199

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           ++  NVN +     + +  R +    + ++           LL
Sbjct: 200 LEGSNVNPVQAMIQILDNTRAFEMQTKLMQTVDQNHQAATQLL 242


>gi|120597306|ref|YP_961880.1| flagellar basal-body rod protein FlgF [Shewanella sp. W3-18-1]
 gi|146294549|ref|YP_001184973.1| flagellar basal-body rod protein FlgF [Shewanella putrefaciens
           CN-32]
 gi|120557399|gb|ABM23326.1| flagellar basal-body rod protein FlgF [Shewanella sp. W3-18-1]
 gi|145566239|gb|ABP77174.1| flagellar basal-body rod protein FlgF [Shewanella putrefaciens
           CN-32]
          Length = 244

 Score = 36.8 bits (83), Expect = 0.95,   Method: Composition-based stats.
 Identities = 10/58 (17%), Positives = 22/58 (37%)

Query: 77  FDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
                 V   SG ++  NV  + E     + +R +   ++ +K +  +      LL +
Sbjct: 186 MAQDDGVLVDSGFLESSNVQAVSELIASMDLSRQFEIQVKLMKSAEKLAEAGNRLLGN 243


>gi|319781684|ref|YP_004141160.1| flagellar basal body rod protein [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317167572|gb|ADV11110.1| flagellar basal body rod protein [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 126

 Score = 36.8 bits (83), Expect = 0.96,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 34/110 (30%), Gaps = 4/110 (3%)

Query: 20  ARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDP 79
            R   ++ NIANA T G T        K +    V   +            + F  +   
Sbjct: 19  VRQSAVAGNIANANTPGYTANDVEPFEKVLDRAAVSLQATQAGHLGNAATNAGFTIKPQE 78

Query: 80  GHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
              V   S      +V +  +     E  R +  N   +K  H MM   +
Sbjct: 79  DDGVVMPS----KNSVVLEDQLLKAGEVRRSFELNTAIVKAFHSMMMMAV 124


>gi|311694358|gb|ADP97231.1| fFlagellar basal-body rod protein FlgB [marine bacterium HP15]
          Length = 139

 Score = 36.8 bits (83), Expect = 0.96,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 44/124 (35%), Gaps = 1/124 (0%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
           ++  I    +  +  R ++++ N+ANA T G       ++      +E + G    +   
Sbjct: 14  SALGIHQHAVEARVKRAEVLANNLANADTPGFKARDLDFQAMMQKAQEQVSGFQMAKTHD 73

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
             +D S    E D  + V +    V    V+   E          + A+ Q +      +
Sbjct: 74  AHMDTSPSASESDLMYRVPHQPS-VDGNTVDAQQEQTRFMRNAMDFQASFQFLNSKFSGL 132

Query: 126 TTTL 129
           T  L
Sbjct: 133 TKAL 136


>gi|166712056|ref|ZP_02243263.1| flagellar hook-associated protein FlgK [Xanthomonas oryzae pv.
          oryzicola BLS256]
          Length = 624

 Score = 36.8 bits (83), Expect = 0.96,   Method: Composition-based stats.
 Identities = 11/64 (17%), Positives = 23/64 (35%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          ++      S L      +  +S N+AN  T G +     +  +T +         G ++ 
Sbjct: 1  MSIMSTGTSALIAFQRALSTVSHNVANINTEGYSRQRVEFATRTPTDMGYAFVGNGAKIT 60

Query: 65 KIGV 68
           +G 
Sbjct: 61 DVGR 64


>gi|126738579|ref|ZP_01754284.1| flagellar basal-body rod protein FlgF [Roseobacter sp. SK209-2-6]
 gi|126720378|gb|EBA17084.1| flagellar basal-body rod protein FlgF [Roseobacter sp. SK209-2-6]
          Length = 238

 Score = 36.8 bits (83), Expect = 0.96,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 23/58 (39%), Gaps = 1/58 (1%)

Query: 78  DPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL-DLLRD 134
           DP   VA   G  +  NVN + +   M E  R Y      ++     +   + +L++ 
Sbjct: 181 DPAENVAMLQGYTEGSNVNAIGQVTRMIEIQRAYEMGQSFLETEDRRIRDAIKNLIKS 238


>gi|2494517|sp|P70910|FLGB_BORHE RecName: Full=Flagellar basal-body rod protein flgB
 gi|1621620|gb|AAB51473.1| flagellar rod protein FlgB [Borrelia hermsii]
          Length = 135

 Score = 36.8 bits (83), Expect = 0.96,   Method: Composition-based stats.
 Identities = 20/117 (17%), Positives = 40/117 (34%), Gaps = 5/117 (4%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M+    S  +A+  L V S R  +I++NIAN  T         +  +          S  
Sbjct: 1   MNIFEMSVDLAHRYLDVLSLRQSVIADNIANVDTPNFKRSKVTFEAELERAILNERASNL 60

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIV-----KYPNVNVLVETADMRETNRLYM 112
             ++    + + F E        +     +        NV++  E  ++ +   +Y 
Sbjct: 61  SLIRGNDKNLNGFKELGYLDVKPSRMLDYLSILKNDGNNVDIDSEMKNLIQNQMIYS 117


>gi|238785491|ref|ZP_04629474.1| hypothetical protein yberc0001_18240 [Yersinia bercovieri ATCC
          43970]
 gi|238713593|gb|EEQ05622.1| hypothetical protein yberc0001_18240 [Yersinia bercovieri ATCC
          43970]
          Length = 549

 Score = 36.8 bits (83), Expect = 0.96,   Method: Composition-based stats.
 Identities = 14/92 (15%), Positives = 33/92 (35%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
           + A SGL+     +  +S NI N +  G    +  + +   +         GV V  + 
Sbjct: 1  MNTAMSGLSAAQYALSTVSNNITNFQVAGYNRQNAIFAQNGGTLSPAGFIGNGVTVTGVN 60

Query: 68 VDQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
           + ++F+          ++     Y  ++ + 
Sbjct: 61 REYNSFITNQLRSSQTQSSGLTTYYQQISQID 92


>gi|332527144|ref|ZP_08403221.1| chemotaxis phosphatase, CheZ [Rubrivivax benzoatilyticus JA2]
 gi|332111572|gb|EGJ11554.1| chemotaxis phosphatase, CheZ [Rubrivivax benzoatilyticus JA2]
          Length = 210

 Score = 36.8 bits (83), Expect = 0.97,   Method: Composition-based stats.
 Identities = 18/132 (13%), Positives = 39/132 (29%), Gaps = 13/132 (9%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           +    IA  GL    +R+  I+   A+A                   E            
Sbjct: 42  MPKLQIATDGLPDARSRLNYIANKTADAANKVLNSVDQAKAEHAKITEATRQ-----IAA 96

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY----MANLQTIKQ 120
           +I  D    V      + V +    V++    +  +  D+      +        + +  
Sbjct: 97  RIVADPVRAVASGAVLNFVQD----VEHSTAKIDEQLTDIMMAQDFHDLTGQVVAKVVTL 152

Query: 121 SHDMMTTTLDLL 132
           ++D+  + + LL
Sbjct: 153 ANDLEDSLVKLL 164


>gi|163738040|ref|ZP_02145456.1| Flagellar hook-associated protein [Phaeobacter gallaeciensis BS107]
 gi|161388656|gb|EDQ13009.1| Flagellar hook-associated protein [Phaeobacter gallaeciensis BS107]
          Length = 482

 Score = 36.8 bits (83), Expect = 0.97,   Method: Composition-based stats.
 Identities = 9/40 (22%), Positives = 18/40 (45%)

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
              V+   E  ++    ++Y AN + I    ++M T L +
Sbjct: 443 AQGVDSDAELQNLIVIEKVYQANARMISVVDELMETLLRI 482



 Score = 36.0 bits (81), Expect = 1.6,   Method: Composition-based stats.
 Identities = 18/101 (17%), Positives = 36/101 (35%), Gaps = 7/101 (6%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             + ++ + A +GL        ++SEN++N  T G       Y R++++      G  GV
Sbjct: 1   MSITSALNSAMTGLTAAGRSTSVVSENLSNVLTPG-------YSRRSLALTSAGDGFSGV 53

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETA 102
           +V  +       ++              VK      + E  
Sbjct: 54  KVGHVQRINDPALQSSVRSANSEVGVAEVKSAFFGRMTELV 94


>gi|152980353|ref|YP_001353112.1| FlgF flagellar basal body rod protein [Janthinobacterium sp.
           Marseille]
 gi|151280430|gb|ABR88840.1| FlgF flagellar basal body rod protein [Janthinobacterium sp.
           Marseille]
          Length = 246

 Score = 36.8 bits (83), Expect = 0.97,   Method: Composition-based stats.
 Identities = 8/39 (20%), Positives = 17/39 (43%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
           ++  NVNV+    +M    R +  N++ +K +       
Sbjct: 201 IEGSNVNVVDAMVNMISLARQFELNMKMLKDADSNAAKA 239


>gi|120613370|ref|YP_973048.1| flagellar basal body rod protein [Acidovorax citrulli AAC00-1]
 gi|120591834|gb|ABM35274.1| flagellar basal body rod protein [Acidovorax citrulli AAC00-1]
          Length = 100

 Score = 36.8 bits (83), Expect = 0.97,   Method: Composition-based stats.
 Identities = 20/117 (17%), Positives = 34/117 (29%), Gaps = 30/117 (25%)

Query: 14  GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTF 73
           GL     ++   + N+AN  T G         R+    +  +   GGV  +         
Sbjct: 11  GLRAAQLQLDTSAHNVANMNTEG--------FRRQTVEQSAVPDQGGVEARVGRA----- 57

Query: 74  VEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
                                 +   +  D       + ANLQ +K    M+ + LD
Sbjct: 58  -----------------AVEGASPEADAVDQMSATYAFSANLQMVKTEDRMLGSLLD 97


>gi|126176155|ref|YP_001052304.1| flagellar basal-body rod protein FlgF [Shewanella baltica OS155]
 gi|125999360|gb|ABN63435.1| flagellar basal-body rod protein FlgF [Shewanella baltica OS155]
          Length = 244

 Score = 36.8 bits (83), Expect = 0.97,   Method: Composition-based stats.
 Identities = 9/49 (18%), Positives = 21/49 (42%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
            SG ++  NV  + E     + +R +   ++ +K +  +      LL +
Sbjct: 195 DSGFLESSNVQAVSELIASMDLSRQFEIQVKLMKSAEKLAEAGNRLLGN 243


>gi|238799108|ref|ZP_04642564.1| Flagellar basal-body rod protein flgF [Yersinia mollaretii ATCC
           43969]
 gi|238717055|gb|EEQ08915.1| Flagellar basal-body rod protein flgF [Yersinia mollaretii ATCC
           43969]
          Length = 251

 Score = 36.8 bits (83), Expect = 0.98,   Method: Composition-based stats.
 Identities = 9/47 (19%), Positives = 17/47 (36%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
             G+++  NV  +    DM    R +   ++ I    +       LL
Sbjct: 202 MPGVLEGSNVKAVEAMTDMIANARSFEMQMKIIHSVDENEQRANQLL 248


>gi|259908811|ref|YP_002649167.1| flagellar basal body rod protein FlgF [Erwinia pyrifoliae Ep1/96]
 gi|224964433|emb|CAX55942.1| Flagellar basal-body rod protein [Erwinia pyrifoliae Ep1/96]
 gi|283478793|emb|CAY74709.1| Flagellar basal-body rod protein flgF [Erwinia pyrifoliae DSM
           12163]
 gi|310767291|gb|ADP12241.1| flagellar basal body rod protein FlgF [Erwinia sp. Ejp617]
          Length = 251

 Score = 36.8 bits (83), Expect = 0.98,   Method: Composition-based stats.
 Identities = 9/47 (19%), Positives = 16/47 (34%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
             G+++  NV       DM    R +   ++ I    +       LL
Sbjct: 202 MPGVLEGSNVKATQTMVDMIANARRFEMQMKIISSVDENEQKANQLL 248


>gi|27381968|ref|NP_773497.1| flagellar hook-associated protein FlgK [Bradyrhizobium japonicum
           USDA 110]
 gi|27355138|dbj|BAC52122.1| flgK [Bradyrhizobium japonicum USDA 110]
          Length = 491

 Score = 36.8 bits (83), Expect = 0.98,   Method: Composition-based stats.
 Identities = 10/37 (27%), Positives = 17/37 (45%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
             VN+  E + M +  R Y A+ + I     M+ + L
Sbjct: 450 SGVNMDDEMSLMLQVERTYSASSKIISTVDQMLQSLL 486


>gi|218672515|ref|ZP_03522184.1| flagellar basal body rod protein FlgG [Rhizobium etli GR56]
          Length = 58

 Score = 36.8 bits (83), Expect = 0.99,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 21/40 (52%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          + +  IA +G+  Q   +++I+ NIAN  TTG       +
Sbjct: 1  MRALAIAATGMDAQQTNLEVIANNIANINTTGFKRARAEF 40


>gi|161614593|ref|YP_001588558.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|161363957|gb|ABX67725.1| hypothetical protein SPAB_02343 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
          Length = 553

 Score = 36.8 bits (83), Expect = 0.99,   Method: Composition-based stats.
 Identities = 17/99 (17%), Positives = 34/99 (34%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           + +  + A SGL    A +  +S NI N    G T  +    +   +         GV V
Sbjct: 1   MSSLINHAMSGLNAAQAALNTVSNNINNYNVAGYTRQTTILAQANSTLGAGGWIGNGVYV 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETA 102
             +  +   F+     G    ++    +Y  ++ +    
Sbjct: 61  SGVQREYDAFITNQLRGAQNQSSGLTTRYEQMSKIDNLL 99


>gi|90021858|ref|YP_527685.1| GTP-binding protein LepA [Saccharophagus degradans 2-40]
 gi|89951458|gb|ABD81473.1| flagellar basal-body rod protein FlgB [Saccharophagus degradans
           2-40]
          Length = 134

 Score = 36.8 bits (83), Expect = 0.99,   Method: Composition-based stats.
 Identities = 18/116 (15%), Positives = 36/116 (31%), Gaps = 1/116 (0%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTP-GSDPYRRKTISFEEVMHGSGGVRVK 64
            +  I  S L+++S R  +++ N+AN  T G      D  +    S  + + G       
Sbjct: 7   KALGIYESALSLRSERAGVLANNLANVNTPGYKARDIDFQQALKDSMGQGIGGKAAKTTH 66

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
                 +            + +   V    V    E A+  +    + A    +  
Sbjct: 67  AAHFGAAENNRFSGEPLYRSPSQPSVDGNTVEEQKEHAEYMKNTLEFQAAFTVLNS 122


>gi|58582192|ref|YP_201208.1| flagellar basal body rod protein FlgB [Xanthomonas oryzae pv.
           oryzae KACC10331]
 gi|84624085|ref|YP_451457.1| flagellar basal body rod protein FlgB [Xanthomonas oryzae pv.
           oryzae MAFF 311018]
 gi|58426786|gb|AAW75823.1| flagellar protein [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|84368025|dbj|BAE69183.1| flagellar protein [Xanthomonas oryzae pv. oryzae MAFF 311018]
          Length = 132

 Score = 36.8 bits (83), Expect = 0.99,   Method: Composition-based stats.
 Identities = 19/129 (14%), Positives = 38/129 (29%), Gaps = 1/129 (0%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
               +   +    LA++  RM++I+ N++N  T G       +     S +    G    
Sbjct: 3   SPFSSFLGVHGDALALREQRMKLIASNLSNVDTPGYKAKDLNFEAALKSAQGEQDGGLMQ 62

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
                                 ++    +    V+   E A        Y A+L  ++  
Sbjct: 63  TTDAKHYAVGGGGLNPFQITRESDQPS-LDGNTVDPDAERAAYGRAALEYRASLSFLESK 121

Query: 122 HDMMTTTLD 130
              M T + 
Sbjct: 122 VRSMLTAIT 130


>gi|325916941|ref|ZP_08179185.1| flagellar hook-associated protein FlgK [Xanthomonas vesicatoria
          ATCC 35937]
 gi|325536844|gb|EGD08596.1| flagellar hook-associated protein FlgK [Xanthomonas vesicatoria
          ATCC 35937]
          Length = 624

 Score = 36.8 bits (83), Expect = 1.00,   Method: Composition-based stats.
 Identities = 11/64 (17%), Positives = 23/64 (35%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          ++      S L      +  +S N+AN  T G +     +  +T +         G ++ 
Sbjct: 1  MSIMSTGTSALIAFQRALSTVSHNVANINTEGYSRQRVEFATRTPTDMGYAFVGNGAKIT 60

Query: 65 KIGV 68
           +G 
Sbjct: 61 DVGR 64


>gi|194468525|ref|ZP_03074509.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|194454889|gb|EDX43728.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
          Length = 553

 Score = 36.8 bits (83), Expect = 1.00,   Method: Composition-based stats.
 Identities = 17/99 (17%), Positives = 34/99 (34%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           + +  + A SGL    A +  +S NI N    G T  +    +   +         GV V
Sbjct: 1   MSSLINHAMSGLNAAQAALNTVSNNINNYNVAGYTRQTTILAQANSTLGAGGWIGNGVYV 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETA 102
             +  +   F+     G    ++    +Y  ++ +    
Sbjct: 61  SGVQREYDAFITNQLRGAQNQSSGLTTRYEQMSKIDNLL 99


>gi|86136708|ref|ZP_01055286.1| flagellar hook-associated protein [Roseobacter sp. MED193]
 gi|85826032|gb|EAQ46229.1| flagellar hook-associated protein [Roseobacter sp. MED193]
          Length = 471

 Score = 36.8 bits (83), Expect = 1.00,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 16/38 (42%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            V+   E  +M      Y AN + +    +MM T L +
Sbjct: 434 GVDSDAELQNMMLIENAYAANAKMLSAIDEMMQTLLRM 471


>gi|114320063|ref|YP_741746.1| flagellar hook-associated protein FlgK [Alkalilimnicola ehrlichii
          MLHE-1]
 gi|114226457|gb|ABI56256.1| flagellar hook-associated protein FlgK [Alkalilimnicola ehrlichii
          MLHE-1]
          Length = 695

 Score = 36.8 bits (83), Expect = 1.00,   Method: Composition-based stats.
 Identities = 13/81 (16%), Positives = 25/81 (30%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +  + +   SGL      +   S NI+N  T G +        +  +         GV+V
Sbjct: 1  MSGTMNTGISGLMAAQRALAATSHNISNVNTEGFSRQRVEQSSRLPTGSGAGFVGNGVQV 60

Query: 64 KKIGVDQSTFVEEFDPGHPVA 84
            +       + E    +   
Sbjct: 61 DTVRRLADQNLIENVRNNTSE 81


>gi|260888523|ref|ZP_05899786.1| flagellar hook-associated protein FlgK [Selenomonas sputigena ATCC
           35185]
 gi|330838173|ref|YP_004412753.1| flagellar hook-associated protein FlgK [Selenomonas sputigena ATCC
           35185]
 gi|260861720|gb|EEX76220.1| flagellar hook-associated protein FlgK [Selenomonas sputigena ATCC
           35185]
 gi|329745937|gb|AEB99293.1| flagellar hook-associated protein FlgK [Selenomonas sputigena ATCC
           35185]
          Length = 571

 Score = 36.8 bits (83), Expect = 1.0,   Method: Composition-based stats.
 Identities = 14/93 (15%), Positives = 30/93 (32%)

Query: 38  TPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNV 97
           T GS    R T +     + +       I  +      +F         +       VN 
Sbjct: 472 TAGSPTETRPTGTVSLNNYYNSVTSALGIDSNAMDTKVKFQQDVMTQIEAWRTSVSGVNW 531

Query: 98  LVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             E ++M +  + Y A  + +    +M+   ++
Sbjct: 532 NEELSNMIKFQQGYSACARCMTTMDEMLDRLVN 564


>gi|28275264|ref|NP_783519.1| flagellar hook-associated protein [Shewanella oneidensis MR-1]
          Length = 386

 Score = 36.8 bits (83), Expect = 1.0,   Method: Composition-based stats.
 Identities = 16/101 (15%), Positives = 31/101 (30%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           I   +IA +G+    +++ + S NIANA T G                       G  V 
Sbjct: 3   IDLLNIARTGVLASQSQLGVTSNNIANANTVGYHRQVATQTTLDSQRLGSSFYGTGTYVS 62

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
            +    + +            ++    Y  ++ L +     
Sbjct: 63  DVKRIYNDYAARELRIGQTTLSAAEASYGKLSELDQIFSQI 103


>gi|50120636|ref|YP_049803.1| flagellar basal body rod protein FlgB [Pectobacterium atrosepticum
           SCRI1043]
 gi|49611162|emb|CAG74608.1| flagellar basal-body rod protein [Pectobacterium atrosepticum
           SCRI1043]
          Length = 138

 Score = 36.8 bits (83), Expect = 1.0,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 47/132 (35%), Gaps = 5/132 (3%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-G 60
           D L AS       L +++ R +I++ NIANA T G       +  +     E    +G G
Sbjct: 3   DKLDASLRFQQEALNLRAQRQEILAANIANADTPGYQARDIDFASQLSKTMEQGRVNGTG 62

Query: 61  VRVKKIGVDQSTFVEEFDPGHP---VANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           + +K   V          P             +    V++  E  +  + +  Y  NL  
Sbjct: 63  IALKTTSVRHIPAQSFQPPELDLLYRVPDQPALDGNTVDMDRERTNFADNSLKYQTNLTV 122

Query: 118 I-KQSHDMMTTT 128
           +  Q   MM+  
Sbjct: 123 LGGQIKGMMSVL 134


>gi|294339843|emb|CAZ88206.1| putative Flagellar basal body FlaE (FlgE) [Thiomonas sp. 3As]
          Length = 415

 Score = 36.8 bits (83), Expect = 1.0,   Method: Composition-based stats.
 Identities = 20/92 (21%), Positives = 30/92 (32%), Gaps = 7/92 (7%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTP-----GSDPYRRKTISFEEVMHGSG 59
          +++   A SGL   S  +Q++  NIANA T G                  +  +      
Sbjct: 1  MSTFQTALSGLQAASTDLQVMGNNIANANTVGFKSSNAQFADTYAAAIAGTSPQYGQVGI 60

Query: 60 GVRVKKIGV--DQSTFVEEFDPGHPVANASGI 89
          G  V  +     Q       +P     N SG 
Sbjct: 61 GTSVATVAQQFSQGNIESTSNPLDVAINGSGF 92


>gi|253990121|ref|YP_003041477.1| flagellar hook-associated protein FlgK [Photorhabdus asymbiotica
           subsp. asymbiotica ATCC 43949]
 gi|253781571|emb|CAQ84734.1| flagellar hook-associated protein 1 flgK [Photorhabdus asymbiotica]
          Length = 547

 Score = 36.8 bits (83), Expect = 1.0,   Method: Composition-based stats.
 Identities = 20/132 (15%), Positives = 40/132 (30%), Gaps = 6/132 (4%)

Query: 8   AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
            + A SGL      +  +S N+AN R  G    S    +   +   V     GV V  I 
Sbjct: 6   INTAMSGLQAAQIALGTLSNNVANMRVPGYNRQSTVINQNGGTMTSVGFIGNGVTVASIN 65

Query: 68  VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRL------YMANLQTIKQS 121
              + F+ +          +       ++ +      +  N        + +    +  +
Sbjct: 66  RQYNEFINQQLSSAQAKQGALTTYSQQISQIDNLLADKANNLSNTIDDFFTSLQNVVSNA 125

Query: 122 HDMMTTTLDLLR 133
            D    T  + +
Sbjct: 126 EDDAARTTTIGK 137



 Score = 33.7 bits (75), Expect = 8.5,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 47/124 (37%), Gaps = 8/124 (6%)

Query: 12  NSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQS 71
            S LA    +    S+N+ NA+        +   +K +  +    G+    V  IG   S
Sbjct: 430 ASQLAAAGTKDGGPSDNV-NAKKL-----IELQSKKLVEGKASFSGAYASMVSTIGNQTS 483

Query: 72  TFVEEFDPGHPVANAS--GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
           T   + +    + N           VN+  E   ++   + Y+AN Q I+ +  +    L
Sbjct: 484 TANVDLETQRNITNQLRVEQQSVSGVNIDEEYGALQSLQQYYLANAQVIQTATTLFNAIL 543

Query: 130 DLLR 133
           DL R
Sbjct: 544 DLRR 547


>gi|145298497|ref|YP_001141338.1| flagellar hook-associated protein FlgK [Aeromonas salmonicida
           subsp. salmonicida A449]
 gi|142851269|gb|ABO89590.1| flagellar hook-associated protein FlgK [Aeromonas salmonicida
           subsp. salmonicida A449]
          Length = 666

 Score = 36.8 bits (83), Expect = 1.0,   Method: Composition-based stats.
 Identities = 17/110 (15%), Positives = 35/110 (31%), Gaps = 2/110 (1%)

Query: 26  SENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVAN 85
           +  +A A               T + +   + +    V  IG   +             N
Sbjct: 557 ANGLALAELQNKDLVRKSTNAGTSNDKMTFNEAYSGLVTGIGNQTNQAKTLLKANETKLN 616

Query: 86  ASGIVKYP--NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            S  +      V++  E A++    + Y A+ Q +  +  +  T L  +R
Sbjct: 617 QSTSIFESVSGVSLEEEAANLIRYQQSYAASAQVVSTAKTIFDTLLSSVR 666



 Score = 36.8 bits (83), Expect = 1.1,   Method: Composition-based stats.
 Identities = 21/91 (23%), Positives = 33/91 (36%), Gaps = 5/91 (5%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
            I  SG+  Q   +Q  S NI N  + G         R  I    V  G+G +   ++ 
Sbjct: 6  LGIGTSGVLAQQRLLQTTSNNIVNVNSQGY-----VRERTLIYTNSVGMGTGDMLTDRVI 60

Query: 68 VDQSTFVEEFDPGHPVANASGIVKYPNVNVL 98
             +      D     A+AS   +  N ++L
Sbjct: 61 NTYAQGEVRRDTSAYYASASRYEQLSNTDIL 91


>gi|90423018|ref|YP_531388.1| flagellar basal body rod protein FlgF [Rhodopseudomonas palustris
           BisB18]
 gi|90105032|gb|ABD87069.1| flagellar basal body rod protein [Rhodopseudomonas palustris
           BisB18]
          Length = 254

 Score = 36.8 bits (83), Expect = 1.0,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 21/44 (47%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            G ++  NVN + E + M E  R Y      ++Q  D+  T L+
Sbjct: 204 QGYIEKSNVNAVAEMSKMIEVTRAYTQISSMLQQQGDLRKTALE 247


>gi|310764854|gb|ADP09804.1| Flagellar hook-associated protein 1, FlgK [Erwinia sp. Ejp617]
          Length = 545

 Score = 36.8 bits (83), Expect = 1.0,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 39/120 (32%), Gaps = 1/120 (0%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           +   +IA SGL+   A + +I  NI NA     +                     GV+V 
Sbjct: 1   MNLFNIARSGLSSSQAGLSVIGSNINNAMNGHYSRRDILLGESGGMISGKGFYGFGVQVN 60

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
            +      F+     G   A A    +Y  +  +       ETN     N +  +   +M
Sbjct: 61  GVQRGYDAFINNELRGGITACAGHKTRYEQLAEIDNMLGNDETNPSVSLN-KFFEALKEM 119



 Score = 36.4 bits (82), Expect = 1.2,   Method: Composition-based stats.
 Identities = 16/87 (18%), Positives = 30/87 (34%), Gaps = 2/87 (2%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP--NVNVLVETADMR 105
            +  +  +  S    V  +G   S    ++     V N           VN+  E   + 
Sbjct: 459 KLVGKATLTESYASLVSGLGSSTSALKADYATAGSVLNELTTKWQSVVGVNLEDEYVTLS 518

Query: 106 ETNRLYMANLQTIKQSHDMMTTTLDLL 132
              + Y AN Q ++ +  M+ T L + 
Sbjct: 519 MFEKYYQANAQVLQTATTMLDTLLAIK 545


>gi|291562041|emb|CBL40857.1| fagellar hook-basal body proteins [butyrate-producing bacterium
           SS3/4]
          Length = 265

 Score = 36.8 bits (83), Expect = 1.0,   Method: Composition-based stats.
 Identities = 16/108 (14%), Positives = 38/108 (35%), Gaps = 1/108 (0%)

Query: 23  QIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHP 82
             I+  I N     ++   +       + + V     G    +     ST   E  P   
Sbjct: 154 GHITAAITNQSDGEESGSQEVTIEDYGTLKVVDFPDQGQLHAEDNGLFSTAQAETTPADT 213

Query: 83  VANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
                 +++  NV+++ +   M  + R   +  Q++K    +M+ ++ 
Sbjct: 214 TVQWK-MLEKSNVDMVEQMTAMMSSQRALQSAAQSLKMYDQIMSKSVS 260


>gi|259907640|ref|YP_002647996.1| Flagellar hook-associated protein 1, FlgK [Erwinia pyrifoliae
           Ep1/96]
 gi|224963262|emb|CAX54746.1| Flagellar hook-associated protein 1, FlgK [Erwinia pyrifoliae
           Ep1/96]
          Length = 545

 Score = 36.8 bits (83), Expect = 1.0,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 39/120 (32%), Gaps = 1/120 (0%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           +   +IA SGL+   A + +I  NI NA     +                     GV+V 
Sbjct: 1   MNLFNIARSGLSSSQAGLSVIGSNINNAMNGHYSRRDILLGESGGMISGKGFYGFGVQVN 60

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
            +      F+     G   A A    +Y  +  +       ETN     N +  +   +M
Sbjct: 61  GVQRGYDAFINNELRGGITACAGHKTRYEQLAEIDNMLGNDETNPSVSLN-KFFEALKEM 119



 Score = 36.4 bits (82), Expect = 1.4,   Method: Composition-based stats.
 Identities = 16/87 (18%), Positives = 30/87 (34%), Gaps = 2/87 (2%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP--NVNVLVETADMR 105
            +  +  +  S    V  +G   S    ++     V N           VN+  E   + 
Sbjct: 459 KLIGKATLTESYASLVSGLGSSTSALKADYATAGSVLNELTTKWQSVVGVNLEDEYVTLS 518

Query: 106 ETNRLYMANLQTIKQSHDMMTTTLDLL 132
              + Y AN Q ++ +  M+ T L + 
Sbjct: 519 MFEKYYQANAQVLQTATTMLDTLLAIK 545


>gi|197262560|ref|ZP_03162634.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|204930865|ref|ZP_03221738.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
 gi|197240815|gb|EDY23435.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|204320324|gb|EDZ05528.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
          Length = 553

 Score = 36.8 bits (83), Expect = 1.0,   Method: Composition-based stats.
 Identities = 17/99 (17%), Positives = 34/99 (34%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           + +  + A SGL    A +  +S NI N    G T  +    +   +         GV V
Sbjct: 1   MSSLINHAMSGLNAAQAALNTVSNNINNYNVAGYTRQTTILAQANSTLGAGGWIGNGVYV 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETA 102
             +  +   F+     G    ++    +Y  ++ +    
Sbjct: 61  SGVQREYDAFITNQLRGAQNQSSGLTTRYEQMSKIDNLL 99


>gi|149173751|ref|ZP_01852380.1| probable flagellar hook-associated protein [Planctomyces maris DSM
           8797]
 gi|148847281|gb|EDL61615.1| probable flagellar hook-associated protein [Planctomyces maris DSM
           8797]
          Length = 558

 Score = 36.8 bits (83), Expect = 1.0,   Method: Composition-based stats.
 Identities = 6/41 (14%), Positives = 20/41 (48%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           ++  V++  ET ++    R + +  + +    ++ T  L++
Sbjct: 518 QFSGVSIDEETINVLTYQRAFQSAARLVSTIDELFTILLNI 558


>gi|329901236|ref|ZP_08272761.1| Flagellar hook-associated protein flgK [Oxalobacteraceae bacterium
           IMCC9480]
 gi|327549168|gb|EGF33760.1| Flagellar hook-associated protein flgK [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 644

 Score = 36.8 bits (83), Expect = 1.0,   Method: Composition-based stats.
 Identities = 12/87 (13%), Positives = 33/87 (37%), Gaps = 2/87 (2%)

Query: 49  ISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP--NVNVLVETADMRE 106
            +    + G+ G+ V  +G      +        + ++   ++     VN+  E +++  
Sbjct: 558 NTPSTTLAGAFGLMVNNVGNKTREVMANAASEGKLVDSVLAIQQSQSGVNLDEEASNLLR 617

Query: 107 TNRLYMANLQTIKQSHDMMTTTLDLLR 133
             + Y A  + ++ +  +    L L R
Sbjct: 618 YQQAYQAAGKIMQTASTLFDVLLSLGR 644



 Score = 33.7 bits (75), Expect = 9.3,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 28/102 (27%), Gaps = 7/102 (6%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +     +  SGL      +     NIANA T G       Y R+ +        S G   
Sbjct: 1   MGNILSVGQSGLLAAQLGVTTTGHNIANAATPG-------YSRQVVIQTSAGGQSSGDGF 53

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
              G   ++    +D        +      +++         
Sbjct: 54  VGQGTTVASIQRIYDAYTATRVNAAQTSKASLDAYSTQVSQI 95


>gi|167553029|ref|ZP_02346779.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|205322438|gb|EDZ10277.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
          Length = 553

 Score = 36.8 bits (83), Expect = 1.0,   Method: Composition-based stats.
 Identities = 17/99 (17%), Positives = 34/99 (34%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           + +  + A SGL    A +  +S NI N    G T  +    +   +         GV V
Sbjct: 1   MSSLINHAMSGLNAAQAALNTVSNNINNYNVAGYTRQTTILAQANSTLGAGGWIGNGVYV 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETA 102
             +  +   F+     G    ++    +Y  ++ +    
Sbjct: 61  SGVQREYDAFITNQLRGAQNQSSGLTTRYEQMSKIDNLL 99


>gi|16760059|ref|NP_455676.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp.
           enterica serovar Typhi str. CT18]
 gi|16764539|ref|NP_460154.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|29142170|ref|NP_805512.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
 gi|56413830|ref|YP_150905.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|62179700|ref|YP_216117.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|167994047|ref|ZP_02575139.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|168234109|ref|ZP_02659167.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|168237266|ref|ZP_02662324.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
 gi|168244782|ref|ZP_02669714.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|168264024|ref|ZP_02685997.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|168467136|ref|ZP_02700978.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|168822627|ref|ZP_02834627.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|194442729|ref|YP_002040437.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194448239|ref|YP_002045182.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|194736355|ref|YP_002114182.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|197249622|ref|YP_002146860.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|197362753|ref|YP_002142390.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
 gi|198241785|ref|YP_002215954.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|200390530|ref|ZP_03217141.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|207857309|ref|YP_002243960.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|213051794|ref|ZP_03344672.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp.
           enterica serovar Typhi str. E00-7866]
 gi|213648932|ref|ZP_03378985.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp.
           enterica serovar Typhi str. J185]
 gi|213865497|ref|ZP_03387616.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp.
           enterica serovar Typhi str. M223]
 gi|224584313|ref|YP_002638111.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|238910997|ref|ZP_04654834.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp.
           enterica serovar Tennessee str. CDC07-0191]
 gi|289828575|ref|ZP_06546400.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-3139]
 gi|61224025|sp|P0A1J5|FLGK_SALTY RecName: Full=Flagellar hook-associated protein 1; Short=HAP1
 gi|61224026|sp|P0A1J6|FLGK_SALTI RecName: Full=Flagellar hook-associated protein 1; Short=HAP1
 gi|25300786|pir||AH0640 flagellar hook-associated protein 1 [imported] - Salmonella
           enterica subsp. enterica serovar Typhi (strain CT18)
 gi|47679|emb|CAA36025.1| HAP1 (AA 1-553) [Salmonella enterica subsp. enterica serovar
           Typhimurium]
 gi|16419700|gb|AAL20113.1| hook-filament junction protein 1 [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|16502353|emb|CAD08307.1| flagellar hook-associated protein 1 [Salmonella enterica subsp.
           enterica serovar Typhi]
 gi|29137800|gb|AAO69361.1| flagellar hook-associated protein 1 [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
 gi|56128087|gb|AAV77593.1| flagellar hook-associated protein 1 [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|62127333|gb|AAX65036.1| flagellar biosynthesis, hook-filament junction protein 1
           [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|194401392|gb|ACF61614.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194406543|gb|ACF66762.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|194711857|gb|ACF91078.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|195630439|gb|EDX49065.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|197094230|emb|CAR59735.1| flagellar hook-associated protein 1 [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
 gi|197213325|gb|ACH50722.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|197289876|gb|EDY29237.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
 gi|197936301|gb|ACH73634.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|199602975|gb|EDZ01521.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|205328045|gb|EDZ14809.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|205331904|gb|EDZ18668.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|205336421|gb|EDZ23185.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|205341046|gb|EDZ27810.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|205347332|gb|EDZ33963.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|206709112|emb|CAR33445.1| flagellar hook-associated protein 1 [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|224468840|gb|ACN46670.1| flagellar hook-associated protein [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|261246394|emb|CBG24203.1| flagellar hook-associated protein 1 [Salmonella enterica subsp.
           enterica serovar Typhimurium str. D23580]
 gi|267992957|gb|ACY87842.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 14028S]
 gi|301157724|emb|CBW17216.1| flagellar hook-associated protein 1 [Salmonella enterica subsp.
           enterica serovar Typhimurium str. SL1344]
 gi|312912170|dbj|BAJ36144.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp.
           enterica serovar Typhimurium str. T000240]
 gi|320086377|emb|CBY96150.1| Flagellar hook-associated protein 1 HAP1 [Salmonella enterica
           subsp. enterica serovar Weltevreden str. 2007-60-3289-1]
 gi|321223801|gb|EFX48864.1| Flagellar hook-associated protein FlgK [Salmonella enterica subsp.
           enterica serovar Typhimurium str. TN061786]
 gi|322616553|gb|EFY13462.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315996572]
 gi|322620506|gb|EFY17370.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-1]
 gi|322622500|gb|EFY19345.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-3]
 gi|322629651|gb|EFY26426.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-4]
 gi|322632629|gb|EFY29375.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-1]
 gi|322636876|gb|EFY33579.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-2]
 gi|322641586|gb|EFY38224.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp.
           enterica serovar Montevideo str. 531954]
 gi|322646487|gb|EFY42997.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp.
           enterica serovar Montevideo str. NC_MB110209-0054]
 gi|322650024|gb|EFY46442.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp.
           enterica serovar Montevideo str. OH_2009072675]
 gi|322653949|gb|EFY50272.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp.
           enterica serovar Montevideo str. CASC_09SCPH15965]
 gi|322663339|gb|EFY59541.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp.
           enterica serovar Montevideo str. 81038-01]
 gi|322670073|gb|EFY66213.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp.
           enterica serovar Montevideo str. MD_MDA09249507]
 gi|322674863|gb|EFY70954.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp.
           enterica serovar Montevideo str. 414877]
 gi|322676667|gb|EFY72734.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp.
           enterica serovar Montevideo str. 366867]
 gi|322682589|gb|EFY78608.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp.
           enterica serovar Montevideo str. 413180]
 gi|322686658|gb|EFY82637.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp.
           enterica serovar Montevideo str. 446600]
 gi|322714170|gb|EFZ05741.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. A50]
 gi|323129453|gb|ADX16883.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 4/74]
 gi|323195772|gb|EFZ80948.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609458-1]
 gi|323198336|gb|EFZ83440.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556150-1]
 gi|323204842|gb|EFZ89836.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609460]
 gi|323209183|gb|EFZ94120.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp.
           enterica serovar Montevideo str. 507440-20]
 gi|323213433|gb|EFZ98229.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556152]
 gi|323217857|gb|EGA02572.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB101509-0077]
 gi|323222145|gb|EGA06529.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB102109-0047]
 gi|323224917|gb|EGA09175.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB110209-0055]
 gi|323229659|gb|EGA13782.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB111609-0052]
 gi|323232884|gb|EGA16980.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009083312]
 gi|323240619|gb|EGA24661.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009085258]
 gi|323242933|gb|EGA26954.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315731156]
 gi|323250251|gb|EGA34140.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2009159199]
 gi|323252625|gb|EGA36463.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008282]
 gi|323258847|gb|EGA42500.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008283]
 gi|323261036|gb|EGA44629.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008284]
 gi|323266945|gb|EGA50430.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008285]
 gi|323269986|gb|EGA53435.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008287]
 gi|326623702|gb|EGE30047.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp.
           enterica serovar Dublin str. 3246]
 gi|332988074|gb|AEF07057.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp.
           enterica serovar Typhimurium str. UK-1]
          Length = 553

 Score = 36.8 bits (83), Expect = 1.0,   Method: Composition-based stats.
 Identities = 17/99 (17%), Positives = 34/99 (34%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           + +  + A SGL    A +  +S NI N    G T  +    +   +         GV V
Sbjct: 1   MSSLINHAMSGLNAAQAALNTVSNNINNYNVAGYTRQTTILAQANSTLGAGGWIGNGVYV 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETA 102
             +  +   F+     G    ++    +Y  ++ +    
Sbjct: 61  SGVQREYDAFITNQLRGAQNQSSGLTTRYEQMSKIDNLL 99


>gi|158422261|ref|YP_001523553.1| flagellar basal body rod protein FlgB [Azorhizobium caulinodans ORS
           571]
 gi|158329150|dbj|BAF86635.1| flagellar basal-body rod protein [Azorhizobium caulinodans ORS 571]
          Length = 169

 Score = 36.8 bits (83), Expect = 1.1,   Method: Composition-based stats.
 Identities = 26/125 (20%), Positives = 42/125 (33%), Gaps = 8/125 (6%)

Query: 8   AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
             +A+      S R   I+ NIANA T G         R+   F  VM+ +         
Sbjct: 49  FDLASRQARWASVRQATITGNIANANTPG------YQAREVEPFSAVMNKTRLSMATTEP 102

Query: 68  VDQSTFVEEFDPGHPVANASGIVKYPN--VNVLVETADMRETNRLYMANLQTIKQSHDMM 125
                     +      + S  V      VN+  E     + NR Y  N   ++  + M+
Sbjct: 103 GHMGVPFAGAETSKTKESDSWEVTASGNSVNLDQEMLKAADVNRTYTLNTNIVRAFNRMI 162

Query: 126 TTTLD 130
            T++ 
Sbjct: 163 LTSVR 167


>gi|157781876|gb|ABV72264.1| FlgE [Azospirillum brasilense]
          Length = 297

 Score = 36.8 bits (83), Expect = 1.1,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 17/41 (41%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSD 42
            +    +    GL  Q+  +  IS NIANA T+G      
Sbjct: 1  MGITTIFNNGVLGLTAQNRALGTISNNIANASTSGFKASET 41


>gi|292489127|ref|YP_003532014.1| flagellar hook-filament junction protein 1 [Erwinia amylovora
           CFBP1430]
 gi|292900246|ref|YP_003539615.1| flagellar hook-associated protein 1 [Erwinia amylovora ATCC 49946]
 gi|291200094|emb|CBJ47220.1| flagellar hook-associated protein 1 [Erwinia amylovora ATCC 49946]
 gi|291554561|emb|CBA22169.1| Flagellar hook-filament junction protein 1 [Erwinia amylovora
           CFBP1430]
 gi|312173285|emb|CBX81540.1| Flagellar hook-filament junction protein 1 [Erwinia amylovora ATCC
           BAA-2158]
          Length = 545

 Score = 36.8 bits (83), Expect = 1.1,   Method: Composition-based stats.
 Identities = 25/149 (16%), Positives = 46/149 (30%), Gaps = 23/149 (15%)

Query: 7   SAHIANSGLAVQSARMQ---IISEN----IANARTTGDTPGSDPYRRK------------ 47
           S  ++ +     S  +     ++EN    IAN      +  SDP                
Sbjct: 397 SLGVSGTAEEGDSFMLNPAAGVAENVSVAIANGEAIAASDSSDPEEVSNNKNLALLLGIQ 456

Query: 48  --TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP--NVNVLVETAD 103
              +  +  +  S    V  +G   S    ++     V             VN+  E   
Sbjct: 457 DEKLIGKATLTESYASLVSGLGSTTSALKADYSTSGSVLKELTTKWQSVVGVNLEDEYVT 516

Query: 104 MRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +    + Y AN Q ++ +  M+ T L + 
Sbjct: 517 LSMFEKYYQANAQVLQTATTMLDTLLAIK 545



 Score = 36.4 bits (82), Expect = 1.2,   Method: Composition-based stats.
 Identities = 23/120 (19%), Positives = 37/120 (30%), Gaps = 1/120 (0%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           +   +IA SGL+   A + +I  NI NA     +                     GV+V 
Sbjct: 1   MNLFNIARSGLSSSQAGLSVIGSNINNAMNGHYSRRDILLGESGGMISGKGFYGFGVQVN 60

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
            +      F+         A A    +Y  +  +       ETN     N +      +M
Sbjct: 61  GVQRGYDAFINNEMRSGITACAGHKARYEQLAEIDNMLGNDETNPSVSLN-KFFDALKEM 119


>gi|283834449|ref|ZP_06354190.1| flagellar hook-associated protein FlgK [Citrobacter youngae ATCC
           29220]
 gi|291069996|gb|EFE08105.1| flagellar hook-associated protein FlgK [Citrobacter youngae ATCC
           29220]
          Length = 458

 Score = 36.8 bits (83), Expect = 1.1,   Method: Composition-based stats.
 Identities = 12/64 (18%), Positives = 26/64 (40%), Gaps = 2/64 (3%)

Query: 68  VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
            +Q+      +      N    V    V++  E  ++    ++Y ANL+ I    D+  +
Sbjct: 395 QNQTEAEAAANVYSEAQNQQSSV--SGVSMDEEAVNLITYQQIYEANLKVISTGADIFDS 452

Query: 128 TLDL 131
            L++
Sbjct: 453 VLEM 456


>gi|323527712|ref|YP_004229865.1| flagellar basal-body rod protein FlgF [Burkholderia sp. CCGE1001]
 gi|323384714|gb|ADX56805.1| flagellar basal-body rod protein FlgF [Burkholderia sp. CCGE1001]
          Length = 252

 Score = 36.8 bits (83), Expect = 1.1,   Method: Composition-based stats.
 Identities = 10/51 (19%), Positives = 18/51 (35%)

Query: 82  PVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
            VA A   ++  NVN +     M    R +    + ++ +         LL
Sbjct: 199 TVAVAPASLEGSNVNPVSAMVSMITNARQFQMQTKLLESADKNDQAANQLL 249


>gi|260437431|ref|ZP_05791247.1| flagellar hook-associated protein FlgK [Butyrivibrio crossotus DSM
           2876]
 gi|292810063|gb|EFF69268.1| flagellar hook-associated protein FlgK [Butyrivibrio crossotus DSM
           2876]
          Length = 579

 Score = 36.8 bits (83), Expect = 1.1,   Method: Composition-based stats.
 Identities = 9/37 (24%), Positives = 18/37 (48%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            V    E ++M +  + Y A+ + I    DM+ T ++
Sbjct: 538 GVASDEELSNMIKFQQAYNASSRFINVIDDMIQTLIN 574


>gi|153840135|ref|ZP_01992802.1| flagellar hook-associated protein FlgK [Vibrio parahaemolyticus
           AQ3810]
 gi|149746243|gb|EDM57333.1| flagellar hook-associated protein FlgK [Vibrio parahaemolyticus
           AQ3810]
          Length = 430

 Score = 36.8 bits (83), Expect = 1.1,   Method: Composition-based stats.
 Identities = 21/120 (17%), Positives = 35/120 (29%), Gaps = 1/120 (0%)

Query: 13  SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQST 72
           S L  Q   +     NI+N  T G +  S                  GV V+ +      
Sbjct: 12  SVLTAQRQ-LNTTGHNISNVNTEGYSRQSVIQGTNDPRMFGGSTYGMGVHVENVRRSWDQ 70

Query: 73  FVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           F          +NA+      N+++L        + ++     +       M  T  DL 
Sbjct: 71  FAVNELNLSSTSNANKTDTQDNLDMLSSMLSSVASKKIPENLNEWFDAVKAMADTPNDLG 130


>gi|294339842|emb|CAZ88205.1| putative flagellar basal-body rod protein FlgF [Thiomonas sp. 3As]
          Length = 245

 Score = 36.8 bits (83), Expect = 1.1,   Method: Composition-based stats.
 Identities = 14/103 (13%), Positives = 32/103 (31%)

Query: 30  ANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGI 89
           A+   +G   GS P     ++  ++++       +                  V  A G 
Sbjct: 140 ADGTISGVPVGSQPNALVVVNRIQLVNPPPAQMQRGADGLFRDTQGPAPADGNVQLAVGA 199

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           ++  NVN +     + +  R +    + ++           LL
Sbjct: 200 LEGSNVNPVQAMIQILDNTRAFEMQTKLMQTVDQNHQAATQLL 242


>gi|194428463|ref|ZP_03061003.1| flagellar hook protein FlgE [Escherichia coli B171]
 gi|194413515|gb|EDX29797.1| flagellar hook protein FlgE [Escherichia coli B171]
          Length = 396

 Score = 36.8 bits (83), Expect = 1.1,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 4/63 (6%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          +   A SGL   +  + +I  NIAN+ T G   G+  +               GV+V  I
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFA----DMFAGSKVGLGVKVAGI 57

Query: 67 GVD 69
            D
Sbjct: 58 TQD 60


>gi|332701538|ref|ZP_08421626.1| flagellar hook-associated protein FlgK [Desulfovibrio africanus
           str. Walvis Bay]
 gi|332551687|gb|EGJ48731.1| flagellar hook-associated protein FlgK [Desulfovibrio africanus
           str. Walvis Bay]
          Length = 696

 Score = 36.8 bits (83), Expect = 1.1,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 17/40 (42%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
             VNV  E  ++      Y A  + I  +++M  T L L 
Sbjct: 656 AGVNVNEEVVNLTRLQDAYDAAAKLITTANEMFETVLSLK 695



 Score = 34.5 bits (77), Expect = 5.7,   Method: Composition-based stats.
 Identities = 11/65 (16%), Positives = 25/65 (38%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +    +I  + L      + +   N+ANA T G +  +  +  +T + +       G  +
Sbjct: 2  ISNLYYIGANALLNYQTAINVTGNNMANAETAGYSRRTVDFATRTTTDKYYGQVGNGSII 61

Query: 64 KKIGV 68
          + I  
Sbjct: 62 QAIRR 66


>gi|330721007|gb|EGG99168.1| Flagellar basal-body rod protein FlgF [gamma proteobacterium
           IMCC2047]
          Length = 246

 Score = 36.8 bits (83), Expect = 1.1,   Method: Composition-based stats.
 Identities = 8/48 (16%), Positives = 25/48 (52%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++G ++  NVN +    ++   +R +  +++ +K + +    +  LL+
Sbjct: 197 SAGFLEGSNVNSVEALTELISLSRQFELHVKMMKTAEENSEASARLLQ 244


>gi|163750564|ref|ZP_02157802.1| hypothetical flagellar hook-associated protein [Shewanella benthica
           KT99]
 gi|161329719|gb|EDQ00708.1| hypothetical flagellar hook-associated protein [Shewanella benthica
           KT99]
          Length = 637

 Score = 36.8 bits (83), Expect = 1.1,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 22/41 (53%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             VN+  E A++    + Y A+ + +  ++++  T L+ +R
Sbjct: 597 SGVNLDEEAANLMRFQQAYQASARIMTTANEIFETLLNAVR 637



 Score = 36.0 bits (81), Expect = 1.6,   Method: Composition-based stats.
 Identities = 13/101 (12%), Positives = 28/101 (27%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           +   +IA +G+    A++ + S NIAN  T G                       G  + 
Sbjct: 3   MDLLNIARTGVLASQAQLAVTSNNIANVNTQGYHRQVAEQSSLESQRLGDHFYGAGTYIS 62

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
            +    + +            +        ++ L +     
Sbjct: 63  DVKRIYNEYAARELRIGQTGASEAQTTQTKMSELDQLFSQI 103


>gi|28897559|ref|NP_797164.1| flagellar hook-associated protein FlgK [Vibrio parahaemolyticus
           RIMD 2210633]
 gi|260364617|ref|ZP_05777219.1| flagellar hook-associated protein FlgK [Vibrio parahaemolyticus
           K5030]
 gi|260878278|ref|ZP_05890633.1| flagellar hook-associated protein FlgK [Vibrio parahaemolyticus
           AN-5034]
 gi|260898108|ref|ZP_05906604.1| flagellar hook-associated protein FlgK [Vibrio parahaemolyticus
           Peru-466]
 gi|260901960|ref|ZP_05910355.1| flagellar hook-associated protein FlgK [Vibrio parahaemolyticus
           AQ4037]
 gi|28805771|dbj|BAC59048.1| polar flagellar hook associated protein type 1 FlgK [Vibrio
           parahaemolyticus RIMD 2210633]
 gi|308086131|gb|EFO35826.1| flagellar hook-associated protein FlgK [Vibrio parahaemolyticus
           Peru-466]
 gi|308090129|gb|EFO39824.1| flagellar hook-associated protein FlgK [Vibrio parahaemolyticus
           AN-5034]
 gi|308106763|gb|EFO44303.1| flagellar hook-associated protein FlgK [Vibrio parahaemolyticus
           AQ4037]
 gi|308115094|gb|EFO52634.1| flagellar hook-associated protein FlgK [Vibrio parahaemolyticus
           K5030]
 gi|328473447|gb|EGF44295.1| flagellar hook-associated protein FlgK [Vibrio parahaemolyticus
           10329]
          Length = 646

 Score = 36.8 bits (83), Expect = 1.1,   Method: Composition-based stats.
 Identities = 21/120 (17%), Positives = 35/120 (29%), Gaps = 1/120 (0%)

Query: 13  SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQST 72
           S L  Q   +     NI+N  T G +  S                  GV V+ +      
Sbjct: 12  SVLTAQRQ-LNTTGHNISNVNTEGYSRQSVIQGTNDPRMFGGSTYGMGVHVENVRRSWDQ 70

Query: 73  FVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           F          +NA+      N+++L        + ++     +       M  T  DL 
Sbjct: 71  FAVNELNLSSTSNANKTDTQDNLDMLSSMLSSVASKKIPENLNEWFDAVKTMADTPNDLG 130



 Score = 34.8 bits (78), Expect = 4.1,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 22/39 (56%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN+  E A+M +  + YMA+ + ++ ++D   T L L
Sbjct: 607 AGVNLDEEAANMMKFQQAYMASSRVMQAANDTFNTILQL 645


>gi|116049015|ref|YP_792183.1| flagellar hook-associated protein FlgK [Pseudomonas aeruginosa
          UCBPP-PA14]
 gi|115584236|gb|ABJ10251.1| flagellar hook-associated protein 1 FlgK [Pseudomonas aeruginosa
          UCBPP-PA14]
          Length = 683

 Score = 36.8 bits (83), Expect = 1.1,   Method: Composition-based stats.
 Identities = 15/84 (17%), Positives = 27/84 (32%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +     I  SGL      + I   NI N +T G +      + +   F    +   G ++
Sbjct: 1  MSDLLSIGLSGLGTSQTWLTITGHNITNVKTPGYSRQDAIQQTQVPQFSGAGYMGSGSQI 60

Query: 64 KKIGVDQSTFVEEFDPGHPVANAS 87
            +    S F+          N+ 
Sbjct: 61 VDVRRLASDFLTGQLRNATSQNSE 84



 Score = 34.8 bits (78), Expect = 3.9,   Method: Composition-based stats.
 Identities = 17/104 (16%), Positives = 34/104 (32%), Gaps = 6/104 (5%)

Query: 28  NIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHP--VAN 85
           N  N       P        T S     + + G  V+++G   +      D         
Sbjct: 580 NALNLNALQTKPTVG----GTGSTGSTYNDAYGGLVERVGTLTAQARASADASQTVLKQA 635

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
                    V++  E A++ +  + Y A+ Q I+ +  +  T +
Sbjct: 636 QDSRDSLSGVSLDEEAANLIQFQQYYSASAQVIQVARSLFDTLI 679


>gi|312164118|gb|ADQ38281.1| flagellar hook protein [Azospirillum brasilense]
          Length = 291

 Score = 36.8 bits (83), Expect = 1.1,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 17/41 (41%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSD 42
            +    +    GL  Q+  +  IS NIANA T+G      
Sbjct: 1  MGITTIFNNGVLGLTAQNRALGTISNNIANASTSGFKASET 41


>gi|323341389|ref|ZP_08081633.1| flagellar basal-body rod protein FlgB [Lactobacillus ruminis ATCC
           25644]
 gi|323091266|gb|EFZ33894.1| flagellar basal-body rod protein FlgB [Lactobacillus ruminis ATCC
           25644]
          Length = 121

 Score = 36.8 bits (83), Expect = 1.1,   Method: Composition-based stats.
 Identities = 19/126 (15%), Positives = 44/126 (34%), Gaps = 6/126 (4%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           + + ++  + + V   R ++IS NIAN  T       +   ++ +   ++      + + 
Sbjct: 1   MDTYNLLKTAMDVSQTRSELISNNIANVNT------PNYKAKRVVFESQLSQAMDSLNLT 54

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           +   +         P     N        NV+V  E  +  +    Y A    +   + M
Sbjct: 55  ETHKNHMQTGGTSGPYITSRNTGFQKNGNNVDVDTEMVNQAQNGLYYSAITSQLNGRYKM 114

Query: 125 MTTTLD 130
           M   ++
Sbjct: 115 MNYVIN 120


>gi|157147096|ref|YP_001454415.1| flagellar hook-associated protein FlgK [Citrobacter koseri ATCC
          BAA-895]
 gi|157084301|gb|ABV13979.1| hypothetical protein CKO_02873 [Citrobacter koseri ATCC BAA-895]
          Length = 461

 Score = 36.8 bits (83), Expect = 1.1,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 26/69 (37%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          ++  +IA SGL      M + S NIAN  T G +             E       GV+V 
Sbjct: 1  MSMINIAFSGLQAAQVGMNVTSMNIANLLTPGYSRQGIIQSSIGPMGEAGFTAGNGVQVD 60

Query: 65 KIGVDQSTF 73
           I    S +
Sbjct: 61 SIRRISSQY 69


>gi|197285504|ref|YP_002151376.1| flagellar hook-associated protein 1 [Proteus mirabilis HI4320]
 gi|194682991|emb|CAR43432.1| flagellar hook-associated protein 1 [Proteus mirabilis HI4320]
          Length = 547

 Score = 36.8 bits (83), Expect = 1.1,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 25/68 (36%)

Query: 6  ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
             + A SGL    A M  IS NIAN +          +     +     +   GV V +
Sbjct: 4  NLINTAMSGLNAAQAAMSTISNNIANQKVNWYNRQMTVFNENGGTMTSNGYIGNGVNVSR 63

Query: 66 IGVDQSTF 73
          I  + + F
Sbjct: 64 IHREYNEF 71


>gi|169831914|ref|YP_001717896.1| flagellar basal-body rod protein FlgB [Candidatus Desulforudis
           audaxviator MP104C]
 gi|169638758|gb|ACA60264.1| flagellar basal-body rod protein FlgB [Candidatus Desulforudis
           audaxviator MP104C]
          Length = 132

 Score = 36.8 bits (83), Expect = 1.1,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 38/118 (32%), Gaps = 11/118 (9%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR-----RKTISFEEVM 55
           M        +    L  Q+ R ++I+ NIAN  T G       ++         S   + 
Sbjct: 1   MIGKDPVMSLLARALDGQAVRQRVIAHNIANLNTPGFKRSRVDFQAFMQAALDDSAVRMK 60

Query: 56  HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
                    + G D    VE        A+ +      NV++  E  ++ +    Y A
Sbjct: 61  RTDPRHLAGRAGDDNGPQVEIVRGTSQRADGN------NVDLEREMVELVDNVLGYRA 112


>gi|34558103|ref|NP_907918.1| flagellar basal-body rod protein FlgG [Wolinella succinogenes DSM
           1740]
 gi|34483821|emb|CAE10818.1| FLAGELLAR BASAL-BODY ROD PROTEIN FLGG [Wolinella succinogenes]
          Length = 277

 Score = 36.8 bits (83), Expect = 1.1,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 23/56 (41%), Gaps = 1/56 (1%)

Query: 76  EFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS-HDMMTTTLD 130
                +  A   G ++  NVN + E   + ETNRL     + +K    D+ T  + 
Sbjct: 216 RNLATNSGALVQGYLEKSNVNAVWEMTGLIETNRLVDMYSKVMKTHMDDLNTEAIT 271


>gi|117919778|ref|YP_868970.1| flagellar hook-associated protein FlgK [Shewanella sp. ANA-3]
 gi|117612110|gb|ABK47564.1| flagellar hook-associated protein FlgK [Shewanella sp. ANA-3]
          Length = 641

 Score = 36.8 bits (83), Expect = 1.1,   Method: Composition-based stats.
 Identities = 16/101 (15%), Positives = 30/101 (29%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           I   +IA +G+    +++ + S NIANA T G                       G  V 
Sbjct: 3   IDLLNIARTGVLASQSQLGVTSNNIANANTAGYHRQVATQSTLESQRLGNSFYGTGTYVD 62

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
            +    + +            +     Y  ++ L +     
Sbjct: 63  DVKRIYNDYAARELRIGQTTLSGAEASYGKLSELDQLFSQI 103



 Score = 34.5 bits (77), Expect = 5.4,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 19/41 (46%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             VN+  E A++    + Y A+ + +  +  +  T L  +R
Sbjct: 601 SGVNLDEEAANLMRFQQAYQASARIMTTAQQIFDTLLTSVR 641


>gi|294084436|ref|YP_003551194.1| flagellar hook protein [Candidatus Puniceispirillum marinum
           IMCC1322]
 gi|292664009|gb|ADE39110.1| Flagellar hook protein [Candidatus Puniceispirillum marinum
           IMCC1322]
          Length = 269

 Score = 36.8 bits (83), Expect = 1.1,   Method: Composition-based stats.
 Identities = 17/100 (17%), Positives = 30/100 (30%)

Query: 30  ANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGI 89
           A  R  G               E  +   G  +           V     G+     SG 
Sbjct: 170 AMTRGNGAVINRGTIALARFQNEADLTSKGNGQFIMNAKTGLPAVGAASQGNFGDVLSGN 229

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
           ++  NV +  E   M    + Y A+ + ++   D++   L
Sbjct: 230 LEVSNVKINDELTSMIRAQQAYSASSRMLQADSDIVKKFL 269


>gi|258511368|ref|YP_003184802.1| flagellar basal-body rod protein FlgB [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
 gi|257478094|gb|ACV58413.1| flagellar basal-body rod protein FlgB [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
          Length = 134

 Score = 36.8 bits (83), Expect = 1.1,   Method: Composition-based stats.
 Identities = 20/121 (16%), Positives = 37/121 (30%), Gaps = 6/121 (4%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY------RRKTISFEEVMHGS 58
           +    +  S L   + R  + + NIANA T G       +         +     +    
Sbjct: 1   MTVFELLQSALDASTLRQAVYANNIANAGTPGYKRQDVAFETLLQSALGSGDSNALGEAQ 60

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
             +  ++   D S         +   + +      NV++  E   M E    Y   +Q I
Sbjct: 61  IPIGAQRPSYDLSALPNVIPEVYTDTSTTVNSNGNNVDITEEMVLMAENQVRYDTLVQDI 120

Query: 119 K 119
            
Sbjct: 121 S 121


>gi|120603704|ref|YP_968104.1| flagellar basal body rod protein FlgB [Desulfovibrio vulgaris DP4]
 gi|120563933|gb|ABM29677.1| flagellar basal-body rod protein FlgB [Desulfovibrio vulgaris DP4]
          Length = 136

 Score = 36.8 bits (83), Expect = 1.1,   Method: Composition-based stats.
 Identities = 27/122 (22%), Positives = 46/122 (37%), Gaps = 4/122 (3%)

Query: 1   MDYLIAS-AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
           M  +  S  ++    + +Q  R  ++  NIAN RT G  P  +    K +     +   G
Sbjct: 1   MKSMYESHVNLVGKVMDMQLQRQNVVMSNIANVRTPGYKP-RELEFEKELQSALGLDAKG 59

Query: 60  GVRVKKIGVDQSTFVEE-FDPGHPVANASGIVKYPN-VNVLVETADMRETNRLYMANLQT 117
            + + +     + F  E F P         +V   + VN+  E   M + +  Y A    
Sbjct: 60  RMTITEKQHLPAVFDPEGFGPEWSKTFKPRVVHGEDRVNLDKEMTKMAKASLQYNALATV 119

Query: 118 IK 119
           IK
Sbjct: 120 IK 121


>gi|58582202|ref|YP_201218.1| flagellar hook-associated protein FlgK [Xanthomonas oryzae pv.
          oryzae KACC10331]
 gi|188576762|ref|YP_001913691.1| flagellar hook-associated protein FlgK [Xanthomonas oryzae pv.
          oryzae PXO99A]
 gi|188576954|ref|YP_001913883.1| flagellar hook-associated protein FlgK [Xanthomonas oryzae pv.
          oryzae PXO99A]
 gi|58426796|gb|AAW75833.1| flagellar protein [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|188521214|gb|ACD59159.1| flagellar hook-associated protein FlgK [Xanthomonas oryzae pv.
          oryzae PXO99A]
 gi|188521406|gb|ACD59351.1| flagellar hook-associated protein FlgK [Xanthomonas oryzae pv.
          oryzae PXO99A]
          Length = 624

 Score = 36.8 bits (83), Expect = 1.1,   Method: Composition-based stats.
 Identities = 11/64 (17%), Positives = 23/64 (35%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          ++      S L      +  +S N+AN  T G +     +  +T +         G ++ 
Sbjct: 1  MSIMSTGTSALIAFQRALSTVSHNVANINTEGYSRQRVEFATRTPTDMGYAFVGNGAKIT 60

Query: 65 KIGV 68
           +G 
Sbjct: 61 DVGR 64


>gi|300693344|ref|YP_003749317.1| flagellar hook-filament junction protein 1 [Ralstonia solanacearum
           PSI07]
 gi|299075381|emb|CBJ34676.1| flagellar hook-filament junction protein 1 [Ralstonia solanacearum
           PSI07]
          Length = 642

 Score = 36.8 bits (83), Expect = 1.1,   Method: Composition-based stats.
 Identities = 17/131 (12%), Positives = 42/131 (32%), Gaps = 5/131 (3%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV- 63
                ++ +G    S     +S N AN+    +       R  T+               
Sbjct: 510 FNGIQMSLTGTPA-SNDTFTVSANTANSTDGHNASAFAQLRNATVLDGGTTSLGSAWTNL 568

Query: 64  ---KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
                I   Q++           ++ S       VN+  E  ++ +  + Y A+ + ++ 
Sbjct: 569 VTQVGIQASQASANLTSQKALLASSTSQQQSVSGVNLDDEAMNLMKYQQAYQASAKVMQT 628

Query: 121 SHDMMTTTLDL 131
           ++ +  + L +
Sbjct: 629 ANSLFDSLLSI 639



 Score = 34.5 bits (77), Expect = 5.0,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 23/59 (38%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
           +I  +GL V    +Q+   NIANA T G +         T       +   GV V  +
Sbjct: 6  LNIGATGLRVADINLQVTGNNIANASTPGYSRQEAVQTENTPMATGAGYLGQGVNVTTV 64


>gi|149911701|ref|ZP_01900309.1| flagellar basal-body rod protein FlgF [Moritella sp. PE36]
 gi|149805231|gb|EDM65248.1| flagellar basal-body rod protein FlgF [Moritella sp. PE36]
          Length = 247

 Score = 36.8 bits (83), Expect = 1.1,   Method: Composition-based stats.
 Identities = 8/44 (18%), Positives = 20/44 (45%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++  NV+ + E   M    R +   ++ +K + +    +  LL+
Sbjct: 202 LETSNVSAVGELTGMINLQRQFEMQIKMMKTAEENDKASDTLLQ 245


>gi|90411011|ref|ZP_01219025.1| flagellar hook-associated protein [Photobacterium profundum 3TCK]
 gi|90328224|gb|EAS44535.1| flagellar hook-associated protein [Photobacterium profundum 3TCK]
          Length = 626

 Score = 36.8 bits (83), Expect = 1.1,   Method: Composition-based stats.
 Identities = 16/124 (12%), Positives = 43/124 (34%)

Query: 8   AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
             +++  +      + + + +  N                      +    G      + 
Sbjct: 502 FTLSSGAMGGDVFAVNLNASDGDNGNLIKMQDLQSQKIMNDGRSSVIDVYEGLNTEMGVQ 561

Query: 68  VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
              ++ ++E       A  S + +   VN+  E A+M +  + YMA+ + +  ++D   T
Sbjct: 562 KASASRLKEVGLVEKDAAQSRVAEIAGVNMDEEAANMMKFQQAYMASSRIMSVANDTFDT 621

Query: 128 TLDL 131
            L++
Sbjct: 622 LLNI 625


>gi|152965613|ref|YP_001361397.1| flagellar basal-body rod protein FlgB [Kineococcus radiotolerans
           SRS30216]
 gi|151360130|gb|ABS03133.1| flagellar basal-body rod protein FlgB [Kineococcus radiotolerans
           SRS30216]
          Length = 116

 Score = 36.8 bits (83), Expect = 1.2,   Method: Composition-based stats.
 Identities = 26/131 (19%), Positives = 40/131 (30%), Gaps = 18/131 (13%)

Query: 1   MDYLIA-SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
           M  L + + H A +GL     R + I++NI+N  T G       +  +  S         
Sbjct: 1   MSDLTSVALHTALNGLQA---RQRAIADNISNINTPGYLANKVAFENELKSAVATGDAGA 57

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
                           E                 NVN+  ET     TN  Y   L  + 
Sbjct: 58  AAVSGIATQKSLEPTRE--------------DGNNVNLDEETISGISTNLSYQTVLSALN 103

Query: 120 QSHDMMTTTLD 130
             + M+ T + 
Sbjct: 104 SKYSMLRTAMS 114


>gi|303326603|ref|ZP_07357045.1| flagellar basal-body rod protein FlgB [Desulfovibrio sp. 3_1_syn3]
 gi|302862591|gb|EFL85523.1| flagellar basal-body rod protein FlgB [Desulfovibrio sp. 3_1_syn3]
          Length = 137

 Score = 36.8 bits (83), Expect = 1.2,   Method: Composition-based stats.
 Identities = 23/136 (16%), Positives = 49/136 (36%), Gaps = 4/136 (2%)

Query: 1   MDYLIAS-AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
           M  +  S   + +  + +Q  R  +I+ N+AN  T    P    +  K +     +   G
Sbjct: 1   MKSMFNSQIGLVSRVMDMQLQRQNVITSNLANVETPNYKPRELAFE-KELQSALGLDMKG 59

Query: 60  GVRVKKIGVDQSTFVEEFD-PGHPVANASGIVKYPN-VNVLVETADMRETNRLYMANLQT 117
            +     G   + F  +   P          +   + V++  E A   +    Y A  Q 
Sbjct: 60  RMSATSEGHMPAAFNPDNFGPEWSKQFKPRQIHGEDRVSLDKEMAKHAKNQLQYTALTQI 119

Query: 118 IKQSHDMMTTTLDLLR 133
           + ++ + M+T +   +
Sbjct: 120 MSKTFEGMSTIIQDGK 135


>gi|326202857|ref|ZP_08192724.1| flagellar hook-associated protein FlgK [Clostridium papyrosolvens
           DSM 2782]
 gi|325986934|gb|EGD47763.1| flagellar hook-associated protein FlgK [Clostridium papyrosolvens
           DSM 2782]
          Length = 544

 Score = 36.8 bits (83), Expect = 1.2,   Method: Composition-based stats.
 Identities = 17/113 (15%), Positives = 32/113 (28%), Gaps = 9/113 (7%)

Query: 27  ENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK---------KIGVDQSTFVEEF 77
            NIA + TTG    +   ++             G              I   Q+      
Sbjct: 427 NNIAASETTGQNGNTGVLKKLMGIRTNQSLFKEGAPEDFMKSLVAGMGIDAQQAETFAIT 486

Query: 78  DPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
                    +  +    VN+  E  +M +  + Y A  + I     +  T ++
Sbjct: 487 QDTLVRQVDNRRMSVSGVNLNEEMTNMIKFQQSYNAAARMIVTMGQIYDTLIN 539



 Score = 36.4 bits (82), Expect = 1.3,   Method: Composition-based stats.
 Identities = 18/106 (16%), Positives = 31/106 (29%), Gaps = 5/106 (4%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M       +IA SGL      +  +  N++NA T G +      ++   S    +    G
Sbjct: 1   MQQSFFGLNIALSGLYTAQRNLDTVGHNLSNATTPGYS-----RQQTIQSASNPLAVLDG 55

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
             +   G   +      D        S  V     +   E     +
Sbjct: 56  TGMVGTGSQATGVQRIRDSYLDFKYWSENVASGEWSKKAELMGEIQ 101


>gi|227355995|ref|ZP_03840387.1| flagellar hook-associated protein 1 [Proteus mirabilis ATCC
          29906]
 gi|227163983|gb|EEI48885.1| flagellar hook-associated protein 1 [Proteus mirabilis ATCC
          29906]
          Length = 547

 Score = 36.8 bits (83), Expect = 1.2,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 25/68 (36%)

Query: 6  ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
             + A SGL    A M  IS NIAN +          +     +     +   GV V +
Sbjct: 4  NLINTAMSGLNAAQAAMSTISNNIANQKVNWYNRQMTVFNENGGTMTSNGYIGNGVNVSR 63

Query: 66 IGVDQSTF 73
          I  + + F
Sbjct: 64 IHREYNEF 71


>gi|225871944|ref|YP_002753398.1| putative flagellar basal-body rod protein FlgG [Acidobacterium
          capsulatum ATCC 51196]
 gi|225793888|gb|ACO33978.1| putative flagellar basal-body rod protein FlgG [Acidobacterium
          capsulatum ATCC 51196]
          Length = 245

 Score = 36.4 bits (82), Expect = 1.2,   Method: Composition-based stats.
 Identities = 16/95 (16%), Positives = 34/95 (35%), Gaps = 7/95 (7%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY-------RRKTISFEEVMH 56
          + +  + A +GL  +S  +  ++ N+ANA T G     D +       R      ++ + 
Sbjct: 1  MESGYYAALTGLLARSQALDSVASNLANAGTAGFRAQQDYFRDVLAGPRANDSQLDQTVD 60

Query: 57 GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVK 91
            G +    + + Q       +P        G  +
Sbjct: 61 NYGVLGGTLLDLAQGPIQATGNPLDLAIQGGGFFE 95


>gi|84624094|ref|YP_451466.1| flagellar hook-associated protein FlgK [Xanthomonas oryzae pv.
          oryzae MAFF 311018]
 gi|84368034|dbj|BAE69192.1| flagellar protein [Xanthomonas oryzae pv. oryzae MAFF 311018]
          Length = 624

 Score = 36.4 bits (82), Expect = 1.2,   Method: Composition-based stats.
 Identities = 11/64 (17%), Positives = 23/64 (35%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          ++      S L      +  +S N+AN  T G +     +  +T +         G ++ 
Sbjct: 1  MSIMSTGTSALIAFQRALSTVSHNVANINTEGYSRQRVEFATRTPTDMGYAFVGNGAKIT 60

Query: 65 KIGV 68
           +G 
Sbjct: 61 DVGR 64


>gi|289670516|ref|ZP_06491591.1| flagellar hook-associated protein FlgK [Xanthomonas campestris
          pv. musacearum NCPPB4381]
          Length = 229

 Score = 36.4 bits (82), Expect = 1.2,   Method: Composition-based stats.
 Identities = 11/64 (17%), Positives = 24/64 (37%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          ++      S L      +  +S N+AN  T G +     +  +T +     +   G ++ 
Sbjct: 1  MSIMSTGTSALIAFQRALSTVSHNVANINTEGYSRQRVEFATRTPTDMGYAYVGNGAKIT 60

Query: 65 KIGV 68
           +G 
Sbjct: 61 DVGR 64


>gi|269792279|ref|YP_003317183.1| flagellar hook-associated protein FlgK [Thermanaerovibrio
           acidaminovorans DSM 6589]
 gi|269099914|gb|ACZ18901.1| flagellar hook-associated protein FlgK [Thermanaerovibrio
           acidaminovorans DSM 6589]
          Length = 858

 Score = 36.4 bits (82), Expect = 1.2,   Method: Composition-based stats.
 Identities = 7/41 (17%), Positives = 18/41 (43%), Gaps = 1/41 (2%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD-LLR 133
            VN+  E  D+ +  + +    + I    +M+   ++ + R
Sbjct: 815 GVNMDEEMMDIIKFQQAFNGIARYITTIDEMLDKIINGMGR 855


>gi|15639387|ref|NP_218836.1| flagellar basal-body rod protein (flgB) [Treponema pallidum subsp.
           pallidum str. Nichols]
 gi|189025629|ref|YP_001933401.1| flagellar basal-body rod protein [Treponema pallidum subsp.
           pallidum SS14]
 gi|3322679|gb|AAC65384.1| flagellar basal-body rod protein (flgB) [Treponema pallidum subsp.
           pallidum str. Nichols]
 gi|189018204|gb|ACD70822.1| flagellar basal-body rod protein [Treponema pallidum subsp.
           pallidum SS14]
 gi|291059786|gb|ADD72521.1| flagellar basal-body rod protein FlgB [Treponema pallidum subsp.
           pallidum str. Chicago]
          Length = 136

 Score = 36.4 bits (82), Expect = 1.2,   Method: Composition-based stats.
 Identities = 15/124 (12%), Positives = 33/124 (26%), Gaps = 6/124 (4%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M+    +  + +  L V + R ++ + N+ANA   G       +  +     +       
Sbjct: 1   MNSFTRTVDLLHRALDVNALRYEVTANNLANAEVPGFKRTDVNFEAELKRALDSQRNETS 60

Query: 61  VRVKKIG------VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
              +          D   +                    NV+   E   + +    Y   
Sbjct: 61  FFKQATAGTNMLSSDVIDYRSVRPRRVLDYLTDVKANGNNVDAEQEAMHVLKIQMHYQML 120

Query: 115 LQTI 118
            Q +
Sbjct: 121 SQMV 124


>gi|315125981|ref|YP_004067984.1| LfgB [Pseudoalteromonas sp. SM9913]
 gi|315014495|gb|ADT67833.1| LfgB [Pseudoalteromonas sp. SM9913]
          Length = 124

 Score = 36.4 bits (82), Expect = 1.2,   Method: Composition-based stats.
 Identities = 19/119 (15%), Positives = 40/119 (33%), Gaps = 9/119 (7%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M+    +  +    + ++  R +II+ N+AN  T G       YR+   S       +  
Sbjct: 1   MELFDKALGVHPFSMKLRLDRAEIIASNLANVDTPGFKSRDVDYRQIMQSVSSSFSQNRD 60

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           V    +  D+  +   + P               V + +E A     +  +  +L  + 
Sbjct: 61  VDFAGVQTDELKYRVPYQPSSDGN---------TVELNIEQAKFASNSMDFQTSLTFLN 110


>gi|71907892|ref|YP_285479.1| flagellar basal-body rod protein FlgB [Dechloromonas aromatica RCB]
 gi|71847513|gb|AAZ47009.1| Flagellar basal-body rod protein FlgB [Dechloromonas aromatica RCB]
          Length = 153

 Score = 36.4 bits (82), Expect = 1.2,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 40/123 (32%), Gaps = 3/123 (2%)

Query: 14  GLAVQSARMQIISENIANARTTGDTP-GSDPYRRKTISFEEVMHGSGGVRVKKIGVDQST 72
            L V++ R Q+I+ NIANA T G      D      I+          +    IG     
Sbjct: 31  ALGVRAYRQQLIASNIANADTPGYKAVDIDFEEAMRIAQSASPIPPTMLATTSIGHISGE 90

Query: 73  FVEEFDPGHP--VANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            V    P        +        V + VE     E + +Y  ++  +     M+     
Sbjct: 91  AVSAQPPYPLKYQVPSQDSADGNTVEMDVERTKFSENSIMYQFSVDRVSGHFKMLMELYQ 150

Query: 131 LLR 133
            L+
Sbjct: 151 SLK 153


>gi|172058673|ref|YP_001815133.1| flagellar basal body rod protein [Exiguobacterium sibiricum 255-15]
 gi|171991194|gb|ACB62116.1| flagellar basal body rod protein [Exiguobacterium sibiricum 255-15]
          Length = 262

 Score = 36.4 bits (82), Expect = 1.2,   Method: Composition-based stats.
 Identities = 10/49 (20%), Positives = 20/49 (40%), Gaps = 1/49 (2%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL-DLLR 133
             G+++  NV V     +M    R + AN + I+         + ++ R
Sbjct: 212 DQGVLELGNVEVEQTMTEMNAGLRQFEANQKVIQAYDRTAEKAVSEIGR 260


>gi|332092842|gb|EGI97910.1| flagellar basal-body rod protein flgF [Shigella dysenteriae 155-74]
          Length = 123

 Score = 36.4 bits (82), Expect = 1.2,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 31/102 (30%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           N     +T       +   +    +        +     Q+T          +   SG +
Sbjct: 19  NPGDPANTVAPVGCLKLVKATGSEVQRGDDGIFRLSAETQATRGPVLQADPTLRVMSGGL 78

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           +  NVN +   +DM  + R +   ++ I    D       LL
Sbjct: 79  EGSNVNAVAAMSDMIASARRFEMQMKVISSVDDNAGRANQLL 120


>gi|126734126|ref|ZP_01749873.1| flagellar hook-associated protein FlgK [Roseobacter sp. CCS2]
 gi|126716992|gb|EBA13856.1| flagellar hook-associated protein FlgK [Roseobacter sp. CCS2]
          Length = 480

 Score = 36.4 bits (82), Expect = 1.2,   Method: Composition-based stats.
 Identities = 9/38 (23%), Positives = 18/38 (47%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            ++  VE   + +  + Y AN + I+    MM   ++L
Sbjct: 443 GIDTDVELQRLLQIEQAYAANAKVIQTVDFMMQRLMEL 480


>gi|92116887|ref|YP_576616.1| flagellar hook-associated protein [Nitrobacter hamburgensis X14]
 gi|91799781|gb|ABE62156.1| Flagellar hook-associated protein [Nitrobacter hamburgensis X14]
          Length = 619

 Score = 36.4 bits (82), Expect = 1.2,   Method: Composition-based stats.
 Identities = 24/88 (27%), Positives = 39/88 (44%), Gaps = 7/88 (7%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            L ++  IA SGL    A + I+S N+ANA T G       Y  +T+  ++++ GS G 
Sbjct: 1  MSLSSALSIAMSGLRANQAALSIVSGNVANANTPG-------YVAQTLVQDQIVTGSTGS 53

Query: 62 RVKKIGVDQSTFVEEFDPGHPVANASGI 89
           V+ IGV+++                  
Sbjct: 54 GVRVIGVNRTLDTYVQSQLRTENAGGAY 81



 Score = 36.4 bits (82), Expect = 1.3,   Method: Composition-based stats.
 Identities = 17/112 (15%), Positives = 28/112 (25%)

Query: 19  SARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFD 78
           + R   I + + +A  T                         V V+      +  V +  
Sbjct: 505 TTRSDFIFDQLTSATYTYSPNTGLGAAAAPFKGTLPSFLQQFVSVQSSAATTAKQVAQGQ 564

Query: 79  PGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
                           VN+  E  ++      Y AN   +     MM T L 
Sbjct: 565 DVVVNTLQEKFNAKAGVNIDTEMTNLIALQNSYAANAHVMSVVQSMMQTLLQ 616


>gi|304438469|ref|ZP_07398409.1| flagellar basal-body rod protein FlgB [Selenomonas sp. oral taxon
           149 str. 67H29BP]
 gi|304368552|gb|EFM22237.1| flagellar basal-body rod protein FlgB [Selenomonas sp. oral taxon
           149 str. 67H29BP]
          Length = 139

 Score = 36.4 bits (82), Expect = 1.2,   Method: Composition-based stats.
 Identities = 17/110 (15%), Positives = 37/110 (33%), Gaps = 4/110 (3%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
                +++  +A  + R +++S NIAN  T      S       +  E  +     + V 
Sbjct: 8   TPVIDVSSRAMAASTLRHEVLSNNIANVNTPNFKR-SHVRFEDLLKKELGLEDDPLMPVV 66

Query: 65  KIGVDQSTFVEEFDPGHPVANASGI---VKYPNVNVLVETADMRETNRLY 111
           +                 +   +     +   NV++ VE A++ +    Y
Sbjct: 67  RTHDRHLPLAYRGKAHGVIEQENTTNMRLDGNNVDIDVEMAEVAKNQLYY 116


>gi|300696919|ref|YP_003747580.1| flagellar hook-filament junction protein 1 [Ralstonia
          solanacearum CFBP2957]
 gi|299073643|emb|CBJ53163.1| flagellar hook-filament junction protein 1 [Ralstonia
          solanacearum CFBP2957]
          Length = 642

 Score = 36.4 bits (82), Expect = 1.2,   Method: Composition-based stats.
 Identities = 17/81 (20%), Positives = 27/81 (33%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
           +IA +GL      +Q+   NIANA T G +                 +   GV V  + 
Sbjct: 6  LNIAATGLRAADVNLQVTGNNIANASTAGYSRQEAVQTENIPMATGAGYLGQGVNVTTVK 65

Query: 68 VDQSTFVEEFDPGHPVANASG 88
               F+         A ++ 
Sbjct: 66 RIYDQFLTAQVQSGQAATSAA 86



 Score = 36.0 bits (81), Expect = 1.9,   Method: Composition-based stats.
 Identities = 17/131 (12%), Positives = 40/131 (30%), Gaps = 5/131 (3%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
                ++ SG    +     +S N AN+    +       R  T+        S G    
Sbjct: 510 FNGIQMSLSGTPATNDTF-TVSANTANSTDGHNASAFAQLRNATVLDNGTTSISSGWSNL 568

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKY----PNVNVLVETADMRETNRLYMANLQTIKQ 120
              V   +     +     +  +           VN+  E   + +  + Y A  + ++ 
Sbjct: 569 VTQVGIQSSRASTNLTSQKSLLASSTAQQQSVSGVNLDDEAMSLMKYQQAYQAAAKVMQT 628

Query: 121 SHDMMTTTLDL 131
           ++ +  + L +
Sbjct: 629 ANSLFDSLLSI 639


>gi|238916198|ref|YP_002929715.1| flagellar hook-associated protein 1 FlgK [Eubacterium eligens ATCC
           27750]
 gi|238871558|gb|ACR71268.1| flagellar hook-associated protein 1 FlgK [Eubacterium eligens ATCC
           27750]
          Length = 646

 Score = 36.4 bits (82), Expect = 1.2,   Method: Composition-based stats.
 Identities = 14/107 (13%), Positives = 28/107 (26%), Gaps = 3/107 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M   +A   I  +GL      +   + N++N  T+G T     +                
Sbjct: 1   MANGMAGLFIGTTGLKTAQTALNTTAHNLSNINTSGYTRQQVTFSDTQYVRVNTSDKVSS 60

Query: 61  VRV---KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
                   +   +    +  D  +   N+           + E  D 
Sbjct: 61  PDYGLGVAVSEVRRIRDQFIDQAYRNENSRLGFYESQYKAIEEIEDQ 107


>gi|229017058|ref|ZP_04173977.1| Flagellar basal-body rod protein flgG [Bacillus cereus AH1273]
 gi|229023239|ref|ZP_04179749.1| Flagellar basal-body rod protein flgG [Bacillus cereus AH1272]
 gi|228738033|gb|EEL88519.1| Flagellar basal-body rod protein flgG [Bacillus cereus AH1272]
 gi|228744231|gb|EEL94314.1| Flagellar basal-body rod protein flgG [Bacillus cereus AH1273]
          Length = 267

 Score = 36.4 bits (82), Expect = 1.2,   Method: Composition-based stats.
 Identities = 9/64 (14%), Positives = 27/64 (42%), Gaps = 1/64 (1%)

Query: 71  STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT-TL 129
           +       P    A  + +++  NV++  E AD+  + ++  A+ + +     +      
Sbjct: 204 AEGNIADLPNGTGAVKNHMLENSNVDMTKEMADLMTSQKMIQASQRVMTSFDKIYEKEAN 263

Query: 130 DLLR 133
           ++L+
Sbjct: 264 EILK 267


>gi|242309690|ref|ZP_04808845.1| predicted protein [Helicobacter pullorum MIT 98-5489]
 gi|239523691|gb|EEQ63557.1| predicted protein [Helicobacter pullorum MIT 98-5489]
          Length = 74

 Score = 36.4 bits (82), Expect = 1.2,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 22/51 (43%)

Query: 82  PVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
                S  ++  N ++   T +         AN QTI+ +  MM + LD+L
Sbjct: 23  DANMRSATLETSNTDITQSTVNTMNAQNGVEANAQTIQTADSMMQSALDIL 73


>gi|254230134|ref|ZP_04923529.1| flagellar hook-associated protein FlgK [Vibrio sp. Ex25]
 gi|151937327|gb|EDN56190.1| flagellar hook-associated protein FlgK [Vibrio sp. Ex25]
          Length = 660

 Score = 36.4 bits (82), Expect = 1.2,   Method: Composition-based stats.
 Identities = 21/120 (17%), Positives = 34/120 (28%), Gaps = 1/120 (0%)

Query: 13  SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQST 72
           S L  Q   +     NI+N  T G +  S                  GV V+ +      
Sbjct: 26  SVLTAQRQ-LNTTGHNISNVNTEGYSRQSVIQGTNDPRMFGGSTYGMGVHVENVRRSWDQ 84

Query: 73  FVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           F           NA+      N+++L        + ++     +       M  T  DL 
Sbjct: 85  FAVNELNLSSTNNANKTDTQDNLDMLSSMLSSVASKKIPENLNEWFDAVKTMADTPNDLG 144



 Score = 35.6 bits (80), Expect = 2.1,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 22/39 (56%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN+  E A+M +  + YMA+ + ++ ++D   T L L
Sbjct: 621 SGVNLDEEAANMMKFQQAYMASSRVMQAANDTFNTILQL 659


>gi|90423518|ref|YP_531888.1| flagellar hook-associated protein [Rhodopseudomonas palustris
           BisB18]
 gi|90105532|gb|ABD87569.1| Flagellar hook-associated protein [Rhodopseudomonas palustris
           BisB18]
          Length = 618

 Score = 36.4 bits (82), Expect = 1.2,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 17/43 (39%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             K   VN+  E + +      Y AN + +    +M+   + +
Sbjct: 576 FSKSAGVNIDEEMSRLMSLQTAYAANARVLSAVREMLDVLMKI 618


>gi|166712065|ref|ZP_02243272.1| flagellar basal body rod protein FlgB [Xanthomonas oryzae pv.
           oryzicola BLS256]
          Length = 133

 Score = 36.4 bits (82), Expect = 1.3,   Method: Composition-based stats.
 Identities = 19/129 (14%), Positives = 37/129 (28%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
               +   +    LA++  RM++I+ N++N  T G       +     S +    G    
Sbjct: 3   SPFSSFLGVHGDALALREQRMKLIASNLSNVDTPGYKAKDLNFEAALKSAQGEQDGGLMQ 62

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
                                  +    +    V+   E A        Y A+L  ++  
Sbjct: 63  TTDAKHYAVGGGGGLNPFQITRESDQPSLDGNTVDPDAERAAYGRAALEYRASLSFLESK 122

Query: 122 HDMMTTTLD 130
              M T + 
Sbjct: 123 VRSMLTAIT 131


>gi|153001466|ref|YP_001367147.1| flagellar hook-associated protein FlgK [Shewanella baltica OS185]
 gi|151366084|gb|ABS09084.1| flagellar hook-associated protein FlgK [Shewanella baltica OS185]
          Length = 641

 Score = 36.4 bits (82), Expect = 1.3,   Method: Composition-based stats.
 Identities = 15/101 (14%), Positives = 31/101 (30%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           +   +IA +G+    +++ + S NIANA T G                       G  V 
Sbjct: 3   VDLLNIARTGVLASQSQLGVTSNNIANANTAGYHRQVATQSTLESQRLGNSFYGTGTYVN 62

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
            +    + +            ++    Y  ++ L +     
Sbjct: 63  DVKRIYNDYAARELRIGQTTLSAAEASYGKLSELDQLFSQI 103



 Score = 34.8 bits (78), Expect = 4.2,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 19/41 (46%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             VN+  E A++    + Y A+ + +  +  +  T L  +R
Sbjct: 601 SGVNLDEEAANLMRFQQAYQASARIMTTAQQIFDTLLSSVR 641


>gi|328470107|gb|EGF41018.1| flagellar hook-associated protein FlgK [Vibrio parahaemolyticus
          10329]
          Length = 457

 Score = 36.4 bits (82), Expect = 1.3,   Method: Composition-based stats.
 Identities = 14/69 (20%), Positives = 24/69 (34%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          +   +IA SGL      + + ++N+A+  T G +                +    GV V 
Sbjct: 1  MNLVNIALSGLNANRVALDVTAQNVASVNTPGYSRQQALMATVGDGKSNRLSSGMGVEVT 60

Query: 65 KIGVDQSTF 73
           I      F
Sbjct: 61 SIRRVTDQF 69


>gi|304397210|ref|ZP_07379089.1| flagellar hook-associated protein FlgK [Pantoea sp. aB]
 gi|304355359|gb|EFM19727.1| flagellar hook-associated protein FlgK [Pantoea sp. aB]
          Length = 549

 Score = 36.4 bits (82), Expect = 1.3,   Method: Composition-based stats.
 Identities = 14/96 (14%), Positives = 37/96 (38%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          + +  + A SGL+   A +   S NI+N    G +  +    +   + +   +   GV +
Sbjct: 1  MSSIINSAMSGLSAAQAALSTTSNNISNYTVAGYSRQTTVLAQANSTLQGNSYYGNGVNI 60

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
            +  +   F+     G     ++   ++  ++ + 
Sbjct: 61 TGVQREYDAFIATQLRGSSANYSAVSTQHSQISNID 96


>gi|307731362|ref|YP_003908586.1| flagellar basal-body rod protein FlgF [Burkholderia sp. CCGE1003]
 gi|307585897|gb|ADN59295.1| flagellar basal-body rod protein FlgF [Burkholderia sp. CCGE1003]
          Length = 252

 Score = 36.4 bits (82), Expect = 1.3,   Method: Composition-based stats.
 Identities = 10/51 (19%), Positives = 19/51 (37%)

Query: 82  PVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
            VA A   ++  NVN +     M    R +    + ++ +     +   LL
Sbjct: 199 TVAVAPASLEGSNVNPVSAMVAMITNARQFQMQTKLLESADKNDQSANQLL 249


>gi|152975150|ref|YP_001374667.1| flagellar hook-associated protein FlgK [Bacillus cereus subsp.
           cytotoxis NVH 391-98]
 gi|152023902|gb|ABS21672.1| flagellar hook-associated protein FlgK [Bacillus cytotoxicus NVH
           391-98]
          Length = 440

 Score = 36.4 bits (82), Expect = 1.3,   Method: Composition-based stats.
 Identities = 7/42 (16%), Positives = 20/42 (47%)

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
              VN+  E  ++    + ++AN + I   +++  +   ++R
Sbjct: 399 MEGVNMEEEMVNLMAFQKYFVANSKAISTMNEVFDSLFSIIR 440



 Score = 33.7 bits (75), Expect = 8.3,   Method: Composition-based stats.
 Identities = 14/84 (16%), Positives = 28/84 (33%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
          +   SG+      ++   +N+ N  T G    +  Y     +         G  V+ +GV
Sbjct: 7  NTPLSGMLAAQVGLKTTQQNLTNIHTPGYVRQAVNYGSVGANNGNTPEQRIGYGVQVMGV 66

Query: 69 DQSTFVEEFDPGHPVANASGIVKY 92
          D+ T   +    +   +      Y
Sbjct: 67 DRITDEIKTKQYNEQLSQLSYYGY 90


>gi|319764536|ref|YP_004128473.1| flagellar basal-body rod protein flgb [Alicycliphilus denitrificans
           BC]
 gi|330826752|ref|YP_004390055.1| flagellar basal-body rod protein FlgB [Alicycliphilus denitrificans
           K601]
 gi|317119097|gb|ADV01586.1| flagellar basal-body rod protein FlgB [Alicycliphilus denitrificans
           BC]
 gi|329312124|gb|AEB86539.1| flagellar basal-body rod protein FlgB [Alicycliphilus denitrificans
           K601]
          Length = 138

 Score = 36.4 bits (82), Expect = 1.3,   Method: Composition-based stats.
 Identities = 30/137 (21%), Positives = 49/137 (35%), Gaps = 16/137 (11%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
           D L        + L ++S R + I+ NIANA T G     D      +   E     GG+
Sbjct: 3   DKLTQRLDFHGNALLLRSERQRAIASNIANADTPGY-VARDFQFADALRAAEGARAPGGM 61

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYP----------NVNVLVETADMRETNRLY 111
           R + +    S       P      + G + Y           +V++  E A   +    Y
Sbjct: 62  RQQSV----SDPRHIPLPAASTGQSGGALGYALQTQPSLDNNSVDMDRERAAFVDNAVRY 117

Query: 112 MANLQTIK-QSHDMMTT 127
            A L+ I   +  M++ 
Sbjct: 118 EATLRFINGNAKTMLSA 134


>gi|220934391|ref|YP_002513290.1| flagellar basal-body rod protein FlgB [Thioalkalivibrio sp.
           HL-EbGR7]
 gi|219995701|gb|ACL72303.1| flagellar basal-body rod protein FlgB [Thioalkalivibrio sp.
           HL-EbGR7]
          Length = 130

 Score = 36.4 bits (82), Expect = 1.3,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 48/126 (38%), Gaps = 14/126 (11%)

Query: 1   MDYLIA-SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
           M      +  I    L ++S R+++++ N+ANA T         Y+ + I F   +  + 
Sbjct: 1   MSLSFDKALGIHADALQLRSRRLELLASNLANADTPN-------YKARDIDFRAALSQAQ 53

Query: 60  GVRVKKIGVDQSTFVEE-----FDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
           G  V  +    S    +      +P + + N    +    V+  +E A   E    Y A+
Sbjct: 54  GGGVGLMRTHASHLSVQGGGVGGEPLYRIPNQPS-LDGNTVDAQLEQAAFSENAVQYQAS 112

Query: 115 LQTIKQ 120
           L  +  
Sbjct: 113 LDFLNS 118


>gi|329901231|ref|ZP_08272756.1| Flagellar basal-body rod protein flgF [Oxalobacteraceae bacterium
           IMCC9480]
 gi|327549163|gb|EGF33755.1| Flagellar basal-body rod protein flgF [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 245

 Score = 36.4 bits (82), Expect = 1.3,   Method: Composition-based stats.
 Identities = 16/109 (14%), Positives = 36/109 (33%), Gaps = 2/109 (1%)

Query: 24  IISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPV 83
            I ++   +     +          I        +       +   ++    E DP   +
Sbjct: 137 TIGKDGTVSSVESGSKPGQAVIIGRIKLVNPPEETMTRGDDTLFRVKTPGGVEADPNVTL 196

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           A   G ++  NVNV+    +M   +R +  ++  +K +    T    +L
Sbjct: 197 A--EGALESSNVNVVDAMVNMISLSRQFEMHMSLLKNAETNSTKAAQIL 243


>gi|91785633|ref|YP_560839.1| flagellar basal body rod protein FlgF [Burkholderia xenovorans
           LB400]
 gi|91689587|gb|ABE32787.1| flgF; flagellar basal-body rod protein [Burkholderia xenovorans
           LB400]
          Length = 252

 Score = 36.4 bits (82), Expect = 1.3,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 16/43 (37%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           ++  NVN +     M    R +    + ++ +     +   LL
Sbjct: 207 LEGSNVNPVSAMVSMITNARQFQMQTKLLESADKNDQSANQLL 249


>gi|323492332|ref|ZP_08097485.1| flagellar hook-associated protein FlgK [Vibrio brasiliensis LMG
          20546]
 gi|323313379|gb|EGA66490.1| flagellar hook-associated protein FlgK [Vibrio brasiliensis LMG
          20546]
          Length = 457

 Score = 36.4 bits (82), Expect = 1.3,   Method: Composition-based stats.
 Identities = 17/95 (17%), Positives = 33/95 (34%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          +   +IA SGL      + + ++N++N  T G +              + +    GV V 
Sbjct: 1  MNLVNIALSGLNANRVALDVTAQNVSNINTPGYSRQQAMMTSVGAGKYDKLSAGMGVEVA 60

Query: 65 KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
           I      F+ +        +A       N++ L 
Sbjct: 61 SIRRVTDQFLIQQTWSTNSLSAYATRYTTNMSQLE 95


>gi|114762163|ref|ZP_01441631.1| putative flagellar basal body rod protein [Pelagibaca bermudensis
           HTCC2601]
 gi|114545187|gb|EAU48190.1| putative flagellar basal body rod protein [Roseovarius sp.
           HTCC2601]
          Length = 237

 Score = 36.4 bits (82), Expect = 1.3,   Method: Composition-based stats.
 Identities = 11/53 (20%), Positives = 23/53 (43%)

Query: 77  FDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
           +DP        G V+  NV+ +++ A M E  R Y      +++  + +   +
Sbjct: 180 YDPAEAPRVRQGFVESANVDPILQIARMIEVQRAYEMGQNFLQREDERVRAAI 232


>gi|289666054|ref|ZP_06487635.1| flagellar hook-associated protein FlgK [Xanthomonas campestris
          pv. vasculorum NCPPB702]
          Length = 223

 Score = 36.4 bits (82), Expect = 1.3,   Method: Composition-based stats.
 Identities = 11/64 (17%), Positives = 24/64 (37%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          ++      S L      +  +S N+AN  T G +     +  +T +     +   G ++ 
Sbjct: 1  MSIMSTGTSALIAFQRALSTVSHNVANINTEGYSRQRVEFATRTPTDMGYAYVGNGAKIT 60

Query: 65 KIGV 68
           +G 
Sbjct: 61 DVGR 64


>gi|170737044|ref|YP_001778304.1| flagellar hook-associated protein FlgK [Burkholderia cenocepacia
           MC0-3]
 gi|169819232|gb|ACA93814.1| flagellar hook-associated protein FlgK [Burkholderia cenocepacia
           MC0-3]
          Length = 429

 Score = 36.4 bits (82), Expect = 1.3,   Method: Composition-based stats.
 Identities = 8/39 (20%), Positives = 19/39 (48%)

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
              V++  E  +  E  ++Y AN++ I  + ++   T+ 
Sbjct: 389 LSGVSMDEEAVNFSEALQVYSANMKVISVAKELFDATIR 427


>gi|332798814|ref|YP_004460313.1| flagellar hook-associated protein FlgK [Tepidanaerobacter sp. Re1]
 gi|332696549|gb|AEE91006.1| flagellar hook-associated protein FlgK [Tepidanaerobacter sp. Re1]
          Length = 459

 Score = 36.4 bits (82), Expect = 1.3,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 28/77 (36%), Gaps = 2/77 (2%)

Query: 56  HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKY--PNVNVLVETADMRETNRLYMA 113
               G  + KIGVD        D    + +     +    +V++  E   M +    Y A
Sbjct: 379 DDYYGTIIAKIGVDSQEATRAADSQAFMVSQLDERRQMTSSVSLDEEMTKMIQYLHGYNA 438

Query: 114 NLQTIKQSHDMMTTTLD 130
             + +    +M+ T ++
Sbjct: 439 ASRIVTTVDEMLDTIIN 455



 Score = 35.6 bits (80), Expect = 2.3,   Method: Composition-based stats.
 Identities = 15/69 (21%), Positives = 24/69 (34%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M        IA + L       Q ++ N++NA T G +           ++    +   G
Sbjct: 1  MQSSFLGIEIAKTALFANQRAQQTVAHNVSNANTPGYSRQRVILEATHTAYGMGANWQIG 60

Query: 61 VRVKKIGVD 69
            VK   VD
Sbjct: 61 TGVKVSDVD 69


>gi|296157455|ref|ZP_06840290.1| flagellar basal-body rod protein FlgF [Burkholderia sp. Ch1-1]
 gi|295892227|gb|EFG72010.1| flagellar basal-body rod protein FlgF [Burkholderia sp. Ch1-1]
          Length = 252

 Score = 36.4 bits (82), Expect = 1.3,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 16/43 (37%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           ++  NVN +     M    R +    + ++ +     +   LL
Sbjct: 207 LEGSNVNPVSAMVSMITNARQFQMQTKLLESADKNDQSANQLL 249


>gi|260768775|ref|ZP_05877709.1| flagellar hook-associated protein FlgK [Vibrio furnissii CIP
           102972]
 gi|260616805|gb|EEX41990.1| flagellar hook-associated protein FlgK [Vibrio furnissii CIP
           102972]
 gi|315180478|gb|ADT87392.1| hypothetical flagellar hook-associated protein [Vibrio furnissii
           NCTC 11218]
          Length = 456

 Score = 36.4 bits (82), Expect = 1.3,   Method: Composition-based stats.
 Identities = 16/130 (12%), Positives = 37/130 (28%), Gaps = 1/130 (0%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISE-NIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           D    ++ ++ S +               A+  T      + P              +  
Sbjct: 325 DPANPASTLSVSNITAAELAFSSNGSVGNADIATELAKLANQPIDINGEQVNIYDVYAQM 384

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           +    +   ++    +          S       V+   E A++      Y AN++ I  
Sbjct: 385 LGTVGVVSQKAQGDYKAAMIGLTEAQSARDSISAVSSNEEAANLMMYMNAYSANMKVIAT 444

Query: 121 SHDMMTTTLD 130
           ++ M  T L+
Sbjct: 445 ANQMFDTVLN 454



 Score = 34.5 bits (77), Expect = 5.2,   Method: Composition-based stats.
 Identities = 14/95 (14%), Positives = 25/95 (26%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          ++  +IA SG       M + ++N AN  + G +                     GV V 
Sbjct: 1  MSMYNIALSGAMANQVAMNVTAQNTANINSAGYSRKVVDQSAVIYGNAGPNSAGSGVSVT 60

Query: 65 KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
           I         E            +     +  + 
Sbjct: 61 SIRRVSDQAAVERLRSANTELQHHLAFMSGMKNIE 95


>gi|238916199|ref|YP_002929716.1| flagellar hook-associated protein 1 FlgK [Eubacterium eligens
          ATCC 27750]
 gi|238871559|gb|ACR71269.1| flagellar hook-associated protein 1 FlgK [Eubacterium eligens
          ATCC 27750]
          Length = 523

 Score = 36.4 bits (82), Expect = 1.3,   Method: Composition-based stats.
 Identities = 19/96 (19%), Positives = 28/96 (29%), Gaps = 3/96 (3%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M        IA +GL      + + S N+AN  T G T  S        +     +   G
Sbjct: 1  MASTFFGLTIAYTGLQAAQTSINVTSHNLANINTKGYTRESA---STKAADALRTYARYG 57

Query: 61 VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVN 96
               + VD      +        N +      NV 
Sbjct: 58 TLGSGVVVDAINQTRDSYYDEKYRNNNTNYGQYNVK 93


>gi|227873524|ref|ZP_03991769.1| flagellar basal-body rod protein [Oribacterium sinus F0268]
 gi|227840614|gb|EEJ50999.1| flagellar basal-body rod protein [Oribacterium sinus F0268]
          Length = 256

 Score = 36.4 bits (82), Expect = 1.3,   Method: Composition-based stats.
 Identities = 12/96 (12%), Positives = 27/96 (28%), Gaps = 4/96 (4%)

Query: 33  RTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKY 92
                      Y    +      +            +Q+   +   P     N   +++ 
Sbjct: 158 DPNSTGNTRTVYGTLKVVDFADYNALHKEDNNLFSTNQTELKK---PADSSINWK-MLEK 213

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
            NVN++ E   M  + R   +  Q ++    +M   
Sbjct: 214 SNVNMVDEMTTMMSSQRALQSAAQMLRMYDTVMAKA 249


>gi|192289142|ref|YP_001989747.1| flagellar hook protein FlgE [Rhodopseudomonas palustris TIE-1]
 gi|192282891|gb|ACE99271.1| flagellar basal body FlaE domain protein [Rhodopseudomonas
          palustris TIE-1]
          Length = 421

 Score = 36.4 bits (82), Expect = 1.3,   Method: Composition-based stats.
 Identities = 17/59 (28%), Positives = 26/59 (44%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
            L  +   A S L  QS  + +IS+NIAN+ TTG    S  + +   +       + G
Sbjct: 1  MSLTGALSSAISALNAQSQSLSMISDNIANSDTTGYKTTSAMFSQLVTASSSATSYASG 59



 Score = 34.8 bits (78), Expect = 3.4,   Method: Composition-based stats.
 Identities = 9/44 (20%), Positives = 17/44 (38%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++    +   + A M    + Y A  Q I   + M  T +  +R
Sbjct: 378 LESSTTDTSSQFASMISAQQAYSAASQVITTVNKMFDTLISAMR 421


>gi|296135673|ref|YP_003642915.1| fagellar hook-basal body protein [Thiomonas intermedia K12]
 gi|295795795|gb|ADG30585.1| fagellar hook-basal body protein [Thiomonas intermedia K12]
          Length = 414

 Score = 36.4 bits (82), Expect = 1.3,   Method: Composition-based stats.
 Identities = 20/92 (21%), Positives = 31/92 (33%), Gaps = 7/92 (7%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSD-----PYRRKTISFEEVMHGSG 59
          +++   A SGL   S  +Q++  NIANA T G    +             +  +      
Sbjct: 1  MSTFQTALSGLQAASTDLQVMGNNIANANTVGFKSSNAQFADSYAAAIAGTSPQYGQVGI 60

Query: 60 GVRVKKIGV--DQSTFVEEFDPGHPVANASGI 89
          G  V  +     Q       +P     N SG 
Sbjct: 61 GTSVATVAQQFSQGNIESTSNPLDVAINGSGF 92


>gi|153834473|ref|ZP_01987140.1| flagellar hook-associated protein FlgK [Vibrio harveyi HY01]
 gi|148869169|gb|EDL68201.1| flagellar hook-associated protein FlgK [Vibrio harveyi HY01]
          Length = 637

 Score = 36.4 bits (82), Expect = 1.3,   Method: Composition-based stats.
 Identities = 16/126 (12%), Positives = 38/126 (30%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
               ++   LA       ++     N             +        +           
Sbjct: 511 TVFELSAGALANDKFTANLVPSEGDNGNLRKMQNIQTDKKMNGNESTIMSLYFNLNTDVG 570

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           +    ++ + +       A    +     VN+  E A+M +  + YMA+ + ++ ++D  
Sbjct: 571 LKTSTASRLADVAQLESEAAQERVASISGVNLDEEAANMMKFQQAYMASSRVMQAANDTF 630

Query: 126 TTTLDL 131
            T L L
Sbjct: 631 NTILQL 636


>gi|304409972|ref|ZP_07391591.1| flagellar hook-associated protein FlgK [Shewanella baltica OS183]
 gi|307302315|ref|ZP_07582073.1| flagellar hook-associated protein FlgK [Shewanella baltica BA175]
 gi|304351381|gb|EFM15780.1| flagellar hook-associated protein FlgK [Shewanella baltica OS183]
 gi|306914353|gb|EFN44774.1| flagellar hook-associated protein FlgK [Shewanella baltica BA175]
          Length = 641

 Score = 36.4 bits (82), Expect = 1.4,   Method: Composition-based stats.
 Identities = 15/101 (14%), Positives = 31/101 (30%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           +   +IA +G+    +++ + S NIANA T G                       G  V 
Sbjct: 3   VDLLNIARTGVLASQSQLGVTSNNIANANTAGYHRQVATQSTLESQRLGNSFYGTGTYVN 62

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
            +    + +            ++    Y  ++ L +     
Sbjct: 63  DVKRIYNDYAARELRIGQTTLSAAEASYGKLSELDQLFSQI 103



 Score = 34.8 bits (78), Expect = 4.4,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 19/41 (46%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             VN+  E A++    + Y A+ + +  +  +  T L  +R
Sbjct: 601 SGVNLDEEAANLMRFQQAYQASARIMTTAQQIFDTLLSSVR 641


>gi|291334032|gb|ADD93707.1| flagellar basal body FlaE domain protein [uncultured marine
           bacterium MedDCM-OCT-S04-C749]
          Length = 210

 Score = 36.4 bits (82), Expect = 1.4,   Method: Composition-based stats.
 Identities = 6/39 (15%), Positives = 19/39 (48%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
           ++  NVN+  E   M +  + +  + + ++ + +M+   
Sbjct: 170 LEASNVNITDELTAMIKAQQQFNGSARLMQTNSEMVEKL 208


>gi|269961605|ref|ZP_06175967.1| flagellar hook-associated protein 1 [Vibrio harveyi 1DA3]
 gi|269833646|gb|EEZ87743.1| flagellar hook-associated protein 1 [Vibrio harveyi 1DA3]
          Length = 637

 Score = 36.4 bits (82), Expect = 1.4,   Method: Composition-based stats.
 Identities = 16/126 (12%), Positives = 38/126 (30%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
               ++   LA       ++     N             +        +           
Sbjct: 511 TVFELSAGALANDKFTANLVPSEGDNGNLRKMQNIQTDKKMNGNESTIMSLYFNLNTDVG 570

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           +    ++ + +       A    +     VN+  E A+M +  + YMA+ + ++ ++D  
Sbjct: 571 LKTSTASRLADVAQLESEAAQERVASISGVNLDEEAANMMKFQQAYMASSRVMQAANDTF 630

Query: 126 TTTLDL 131
            T L L
Sbjct: 631 NTILQL 636


>gi|156973594|ref|YP_001444501.1| flagellar hook-associated protein FlgK [Vibrio harveyi ATCC
           BAA-1116]
 gi|156525188|gb|ABU70274.1| hypothetical protein VIBHAR_01297 [Vibrio harveyi ATCC BAA-1116]
          Length = 637

 Score = 36.4 bits (82), Expect = 1.4,   Method: Composition-based stats.
 Identities = 16/126 (12%), Positives = 38/126 (30%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
               ++   LA       ++     N             +        +           
Sbjct: 511 TVFELSAGALANDKFTANLVPSEGDNGNLRKMQNIQTDKKMNGNESTIMSLYFNLNTDVG 570

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           +    ++ + +       A    +     VN+  E A+M +  + YMA+ + ++ ++D  
Sbjct: 571 LKTSTASRLADVAQLESEAAQERVASISGVNLDEEAANMMKFQQAYMASSRVMQAANDTF 630

Query: 126 TTTLDL 131
            T L L
Sbjct: 631 NTILQL 636


>gi|170741833|ref|YP_001770488.1| flagellar basal body rod protein FlgB [Methylobacterium sp. 4-46]
 gi|168196107|gb|ACA18054.1| flagellar basal body rod protein [Methylobacterium sp. 4-46]
          Length = 127

 Score = 36.4 bits (82), Expect = 1.4,   Method: Composition-based stats.
 Identities = 20/112 (17%), Positives = 36/112 (32%), Gaps = 5/112 (4%)

Query: 19  SARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFD 78
           S R   ++ NIANA T G     D      +     +  +   +        +   +   
Sbjct: 18  SVRQATVAGNIANADTPGYK-ARDVVPFAEVLSRAGLDLAATSQGHLRAGTTTPTAKVKP 76

Query: 79  PGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
                A   G     +V++  E     +  R +  N   +K  H MM + + 
Sbjct: 77  SESWDAIQGGH----SVSLEQEMLKSNDIARDFNLNTAVVKAFHRMMLSGVR 124


>gi|160876197|ref|YP_001555513.1| flagellar hook-associated protein FlgK [Shewanella baltica OS195]
 gi|160861719|gb|ABX50253.1| flagellar hook-associated protein FlgK [Shewanella baltica OS195]
 gi|315268387|gb|ADT95240.1| flagellar hook-associated protein FlgK [Shewanella baltica OS678]
          Length = 641

 Score = 36.4 bits (82), Expect = 1.4,   Method: Composition-based stats.
 Identities = 15/101 (14%), Positives = 31/101 (30%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           +   +IA +G+    +++ + S NIANA T G                       G  V 
Sbjct: 3   VDLLNIARTGVLASQSQLGVTSNNIANANTAGYHRQVATQSTLESQRLGNSFYGTGTYVN 62

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
            +    + +            ++    Y  ++ L +     
Sbjct: 63  DVKRIYNDYAARELRIGQTTLSAAEASYGKLSELDQLFSQI 103



 Score = 34.8 bits (78), Expect = 4.5,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 19/41 (46%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             VN+  E A++    + Y A+ + +  +  +  T L  +R
Sbjct: 601 SGVNLDEEAANLMRFQQAYQASARIMTTAQQIFDTLLSSVR 641


>gi|126175140|ref|YP_001051289.1| flagellar hook-associated protein FlgK [Shewanella baltica OS155]
 gi|125998345|gb|ABN62420.1| flagellar hook-associated protein FlgK [Shewanella baltica OS155]
          Length = 641

 Score = 36.4 bits (82), Expect = 1.4,   Method: Composition-based stats.
 Identities = 15/101 (14%), Positives = 31/101 (30%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           +   +IA +G+    +++ + S NIANA T G                       G  V 
Sbjct: 3   VDLLNIARTGVLASQSQLGVTSNNIANANTAGYHRQVATQSTLESQRLGNSFYGTGTYVN 62

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
            +    + +            ++    Y  ++ L +     
Sbjct: 63  DVKRIYNDYAARELRIGQTTLSAAEASYGKLSELDQLFSQI 103



 Score = 34.8 bits (78), Expect = 4.4,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 19/41 (46%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             VN+  E A++    + Y A+ + +  +  +  T L  +R
Sbjct: 601 SGVNLDEEAANLMRFQQAYQASARIMTTAQQIFDTLLSSVR 641


>gi|302339108|ref|YP_003804314.1| flagellar hook-associated protein FlgK [Spirochaeta smaragdinae DSM
           11293]
 gi|301636293|gb|ADK81720.1| flagellar hook-associated protein FlgK [Spirochaeta smaragdinae DSM
           11293]
          Length = 627

 Score = 36.4 bits (82), Expect = 1.4,   Method: Composition-based stats.
 Identities = 9/38 (23%), Positives = 17/38 (44%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             VN+  E A+M +    Y A  + I    +M+   ++
Sbjct: 586 AGVNLDEELANMIKFQHGYAAASRFITAVDEMLDVIIN 623


>gi|78777302|ref|YP_393617.1| flagellar basal body rod protein [Sulfurimonas denitrificans DSM
          1251]
 gi|78497842|gb|ABB44382.1| Flagellar basal body rod protein [Sulfurimonas denitrificans DSM
          1251]
          Length = 276

 Score = 36.4 bits (82), Expect = 1.4,   Method: Composition-based stats.
 Identities = 9/38 (23%), Positives = 19/38 (50%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGS 41
          + +  + + +G+  Q  R+  I+ N+AN  T G    +
Sbjct: 1  MQSGYYSSAAGMVTQFNRLDTIANNLANVNTVGFKEDN 38


>gi|2689167|emb|CAA06002.1| hook associated flagellar protein 1 [Borrelia burgdorferi]
          Length = 253

 Score = 36.4 bits (82), Expect = 1.4,   Method: Composition-based stats.
 Identities = 13/80 (16%), Positives = 24/80 (30%), Gaps = 7/80 (8%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDP-------YRRKTISFEE 53
          MD   +   I    L      M  +  N++NA   G +            Y  +    ++
Sbjct: 1  MDSTFSGIEIGKRSLFAHKDAMNTVGHNLSNATKPGYSRQRVTMKTEIPLYAPQLNRAKK 60

Query: 54 VMHGSGGVRVKKIGVDQSTF 73
                G+ V+ I   +   
Sbjct: 61 QGQLGQGIVVQSIDRVKDEL 80


>gi|329849966|ref|ZP_08264812.1| flagellar hook-associated protein FlgK [Asticcacaulis biprosthecum
           C19]
 gi|328841877|gb|EGF91447.1| flagellar hook-associated protein FlgK [Asticcacaulis biprosthecum
           C19]
          Length = 713

 Score = 36.4 bits (82), Expect = 1.4,   Method: Composition-based stats.
 Identities = 24/107 (22%), Positives = 35/107 (32%), Gaps = 12/107 (11%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             L +  +I  SGL     +++I S+NI+N  T G       Y RK      V  G  G+
Sbjct: 1   MSLTSIMNIGVSGLMTAQEQLRITSDNISNVNTPG-------YIRKVSHQTAVNIGGKGM 53

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
            V              D     A           +V  E  D  ++ 
Sbjct: 54  GVTS-----GQVTLAADRYLQAAQLKATSTAAAADVTYELLDQIQSQ 95



 Score = 35.6 bits (80), Expect = 2.6,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 20/41 (48%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            Y  VN+  E  ++    + Y A  + I+ + DM  T L++
Sbjct: 672 AYEGVNLDEELVNLTVYQQGYSAAGRLIQAAKDMYDTLLEM 712


>gi|325982370|ref|YP_004294772.1| flagellar basal-body rod protein FlgF [Nitrosomonas sp. AL212]
 gi|325531889|gb|ADZ26610.1| flagellar basal-body rod protein FlgF [Nitrosomonas sp. AL212]
          Length = 247

 Score = 36.4 bits (82), Expect = 1.4,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 18/43 (41%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           ++  NVNV+ E   M    R +   ++ ++ +         ++
Sbjct: 201 LEGSNVNVVHEMVSMIALARQFDMQMKMLENAERNAQQASQIM 243


>gi|206974984|ref|ZP_03235899.1| putative flagellar hook-associated protein [Bacillus cereus
           H3081.97]
 gi|206747003|gb|EDZ58395.1| putative flagellar hook-associated protein [Bacillus cereus
           H3081.97]
          Length = 415

 Score = 36.4 bits (82), Expect = 1.4,   Method: Composition-based stats.
 Identities = 7/40 (17%), Positives = 20/40 (50%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            VN+  E  ++    + ++AN + I   +++  +   ++R
Sbjct: 376 GVNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSLFSIIR 415


>gi|217972604|ref|YP_002357355.1| flagellar hook-associated protein FlgK [Shewanella baltica OS223]
 gi|217497739|gb|ACK45932.1| flagellar hook-associated protein FlgK [Shewanella baltica OS223]
          Length = 641

 Score = 36.4 bits (82), Expect = 1.4,   Method: Composition-based stats.
 Identities = 15/101 (14%), Positives = 31/101 (30%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           +   +IA +G+    +++ + S NIANA T G                       G  V 
Sbjct: 3   VDLLNIARTGVLASQSQLGVTSNNIANANTAGYHRQVATQSTLESQRLGNSFYGTGTYVN 62

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
            +    + +            ++    Y  ++ L +     
Sbjct: 63  DVKRIYNDYAARELRIGQTTLSAAEASYGKLSELDQLFSQI 103



 Score = 34.5 bits (77), Expect = 4.7,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 19/41 (46%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             VN+  E A++    + Y A+ + +  +  +  T L  +R
Sbjct: 601 SGVNLDEEAANLMRFQQAYQASARIMTTAQQIFDTLLSSVR 641


>gi|83593864|ref|YP_427616.1| hypothetical protein Rru_A2529 [Rhodospirillum rubrum ATCC 11170]
 gi|83576778|gb|ABC23329.1| Protein of unknown function DUF1078 [Rhodospirillum rubrum ATCC
           11170]
          Length = 452

 Score = 36.4 bits (82), Expect = 1.4,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 19/40 (47%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            VNV  ETA M    + +    Q I  + +M  T + +++
Sbjct: 413 GVNVEEETAKMLVFQQSFQMTSQVITTAREMFNTLMSMMK 452


>gi|39933722|ref|NP_945998.1| flagellar hook protein FlgE [Rhodopseudomonas palustris CGA009]
 gi|39647569|emb|CAE26089.1| possible flagellar hook protein FlgE [Rhodopseudomonas palustris
          CGA009]
          Length = 421

 Score = 36.4 bits (82), Expect = 1.4,   Method: Composition-based stats.
 Identities = 17/59 (28%), Positives = 26/59 (44%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
            L  +   A S L  QS  + +IS+NIAN+ TTG    S  + +   +       + G
Sbjct: 1  MSLTGALSSAISALNAQSQSLSMISDNIANSDTTGYKTTSAMFSQLVTASSSATSYASG 59



 Score = 34.8 bits (78), Expect = 3.6,   Method: Composition-based stats.
 Identities = 9/44 (20%), Positives = 17/44 (38%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++    +   + A M    + Y A  Q I   + M  T +  +R
Sbjct: 378 LESSTTDTSSQFASMISAQQAYSAASQVITTVNKMFDTLISAMR 421


>gi|332533169|ref|ZP_08409038.1| flagellar hook-associated protein FlgK [Pseudoalteromonas
          haloplanktis ANT/505]
 gi|332037451|gb|EGI73905.1| flagellar hook-associated protein FlgK [Pseudoalteromonas
          haloplanktis ANT/505]
          Length = 667

 Score = 36.4 bits (82), Expect = 1.4,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 19/40 (47%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
              +IA+SG+   S  +Q  S+NIAN  T G       +
Sbjct: 3  FNLLNIASSGVRASSELLQTTSKNIANVNTEGYVRERTEF 42


>gi|325918874|ref|ZP_08180951.1| flagellar basal-body rod protein FlgB [Xanthomonas vesicatoria ATCC
           35937]
 gi|325534911|gb|EGD06830.1| flagellar basal-body rod protein FlgB [Xanthomonas vesicatoria ATCC
           35937]
          Length = 133

 Score = 36.4 bits (82), Expect = 1.4,   Method: Composition-based stats.
 Identities = 18/129 (13%), Positives = 38/129 (29%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
               +   +    L+++  RM++I+ N++N  T G       +     S + +  G    
Sbjct: 3   SPFSSFLGVHGDALSLREQRMKLIASNLSNVDTPGYKAKDLNFEAALKSAQGMQDGGLMQ 62

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
                  +                    +    V+   E A        Y A+L  ++  
Sbjct: 63  ATDAKHYEVGGSAGLNPFQITREADQPSLDGNTVDPDAERAAYGRAALEYRASLSFLESK 122

Query: 122 HDMMTTTLD 130
              M T + 
Sbjct: 123 VRSMLTAIT 131


>gi|301051132|ref|ZP_07197963.1| flagellar hook-associated protein FlgK [Escherichia coli MS 185-1]
 gi|300297216|gb|EFJ53601.1| flagellar hook-associated protein FlgK [Escherichia coli MS 185-1]
          Length = 425

 Score = 36.4 bits (82), Expect = 1.4,   Method: Composition-based stats.
 Identities = 15/110 (13%), Positives = 35/110 (31%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           + +  + A SGL    A +   S NI++    G T  +    +   +         GV V
Sbjct: 1   MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGGWVGNGVYV 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
             +  +   F+          ++    +Y  ++ +        ++     
Sbjct: 61  SGVQREYDAFITNQLRAAQTQSSGLTARYEQMSKIDNMLSTSTSSLATQM 110


>gi|260222469|emb|CBA32064.1| Flagellar basal-body rod protein flgF [Curvibacter putative
           symbiont of Hydra magnipapillata]
          Length = 246

 Score = 36.4 bits (82), Expect = 1.4,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 21/47 (44%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
            +G+++  NVN +     M +T R + A  + ++ +         LL
Sbjct: 196 QAGMLEGSNVNAIEAMVGMIQTARQFEAQTRLMQTAESNDRAAGQLL 242


>gi|242277990|ref|YP_002990119.1| flagellar hook-associated protein FlgK [Desulfovibrio salexigens
           DSM 2638]
 gi|242120884|gb|ACS78580.1| flagellar hook-associated protein FlgK [Desulfovibrio salexigens
           DSM 2638]
          Length = 694

 Score = 36.4 bits (82), Expect = 1.4,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 32/105 (30%), Gaps = 2/105 (1%)

Query: 30  ANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGI 89
           A A        +  ++    S E   +      V  +G D +           V      
Sbjct: 590 ARAVAALTGKKNVNFKSGGTSTESSFNDYYSSLVATVGSDAADAKANLSISQTVLKGLVD 649

Query: 90  VKYP--NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
            +     V++  E   +    R Y    Q IK +++M  T L L 
Sbjct: 650 KQESVGGVSIDEEMDIIASYQRSYRTAAQLIKTANEMFDTLLSLK 694


>gi|254485859|ref|ZP_05099064.1| flagellar basal-body rod protein FlgF [Roseobacter sp. GAI101]
 gi|214042728|gb|EEB83366.1| flagellar basal-body rod protein FlgF [Roseobacter sp. GAI101]
          Length = 237

 Score = 36.4 bits (82), Expect = 1.4,   Method: Composition-based stats.
 Identities = 11/52 (21%), Positives = 20/52 (38%)

Query: 78  DPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
           +P        G  +  NV+ + + A M E  R Y      ++   + + T L
Sbjct: 181 EPAVNARVVQGFTEGSNVDAVSQLARMIEVQRAYEMGQSFLESEDERIRTAL 232


>gi|192360466|ref|YP_001982403.1| flagellar basal-body rod protein FlgB [Cellvibrio japonicus
           Ueda107]
 gi|190686631|gb|ACE84309.1| flagellar basal-body rod protein FlgB [Cellvibrio japonicus
           Ueda107]
          Length = 133

 Score = 36.4 bits (82), Expect = 1.4,   Method: Composition-based stats.
 Identities = 19/121 (15%), Positives = 39/121 (32%), Gaps = 1/121 (0%)

Query: 1   MDYLIA-SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
           M      +  I  S L  +S R  +++ N+AN  T         +++      +      
Sbjct: 1   MSISFDKALGIHESALKFRSERASVLANNLANIDTPNYKARDVDFKQALGQQMKKAERFD 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
                +  +  STFV   +           +    V   +E A+  +    + A+ Q + 
Sbjct: 61  VATTNEKHIPASTFVGVDEGLLYRVPQQPSIDGNTVEDQIEHAEYMKNALAFQASFQFLN 120

Query: 120 Q 120
            
Sbjct: 121 S 121


>gi|170694393|ref|ZP_02885547.1| flagellar basal-body rod protein FlgF [Burkholderia graminis C4D1M]
 gi|170140816|gb|EDT08990.1| flagellar basal-body rod protein FlgF [Burkholderia graminis C4D1M]
          Length = 252

 Score = 36.4 bits (82), Expect = 1.4,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 16/43 (37%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           ++  NVN +     M    R +    + ++ +     +   LL
Sbjct: 207 LEGSNVNPVSAMVSMITNARQFQMQTKLLESADKNDQSANQLL 249


>gi|167770196|ref|ZP_02442249.1| hypothetical protein ANACOL_01539 [Anaerotruncus colihominis DSM
           17241]
 gi|167667518|gb|EDS11648.1| hypothetical protein ANACOL_01539 [Anaerotruncus colihominis DSM
           17241]
          Length = 254

 Score = 36.4 bits (82), Expect = 1.4,   Method: Composition-based stats.
 Identities = 7/41 (17%), Positives = 15/41 (36%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
            G  +  N++   E A + E  R + A    ++    +   
Sbjct: 206 QGWTERSNIDPNREMALVMEAQRTFQACSSALQILDKINQK 246


>gi|120554030|ref|YP_958381.1| flagellar basal body rod protein FlgB [Marinobacter aquaeolei VT8]
 gi|120323879|gb|ABM18194.1| flagellar basal-body rod protein FlgB [Marinobacter aquaeolei VT8]
          Length = 132

 Score = 36.4 bits (82), Expect = 1.4,   Method: Composition-based stats.
 Identities = 21/124 (16%), Positives = 43/124 (34%), Gaps = 1/124 (0%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
            +  I    L  +  R ++++ N+ANA T G       ++      ++ M G G      
Sbjct: 7   KALGIHEHALQARVKRAEVLANNLANADTPGYKARDVDFQAMMQKAQDSMTGFGMTTTHS 66

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
             +D S+   + +  +   +    +    V+   E          Y A+ Q +      +
Sbjct: 67  GHMDTSSPGADGELLYRTPHQPS-IDGNTVDAQAEQTRFMRNAMDYQASFQFLSSRFSGL 125

Query: 126 TTTL 129
           T  L
Sbjct: 126 TKAL 129


>gi|269965418|ref|ZP_06179537.1| flagellar hook-associated protein 1 [Vibrio alginolyticus 40B]
 gi|269829897|gb|EEZ84127.1| flagellar hook-associated protein 1 [Vibrio alginolyticus 40B]
          Length = 646

 Score = 36.4 bits (82), Expect = 1.4,   Method: Composition-based stats.
 Identities = 21/120 (17%), Positives = 34/120 (28%), Gaps = 1/120 (0%)

Query: 13  SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQST 72
           S L  Q   +     NI+N  T G +  S                  GV V+ +      
Sbjct: 12  SVLTAQRQ-LNTTGHNISNVNTDGYSRQSVIQGTNDPRMFGGSTYGMGVHVENVRRSWDQ 70

Query: 73  FVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           F           NA+      N+++L        + ++     +       M  T  DL 
Sbjct: 71  FAVNELNLSSTNNANKTDTQDNLDMLSSMLSSVASKKIPENLNEWFDAVKTMADTPNDLG 130



 Score = 35.6 bits (80), Expect = 2.4,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 22/39 (56%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN+  E A+M +  + YMA+ + ++ ++D   T L L
Sbjct: 607 SGVNLDEEAANMMKFQQAYMASSRVMQAANDTFNTILQL 645


>gi|229195951|ref|ZP_04322704.1| Flagellar hook-associated protein FlgK [Bacillus cereus m1293]
 gi|228587510|gb|EEK45575.1| Flagellar hook-associated protein FlgK [Bacillus cereus m1293]
          Length = 420

 Score = 36.4 bits (82), Expect = 1.4,   Method: Composition-based stats.
 Identities = 7/40 (17%), Positives = 20/40 (50%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            VN+  E  ++    + ++AN + I   +++  +   ++R
Sbjct: 381 GVNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSLFSIIR 420


>gi|78485815|ref|YP_391740.1| flagellar basal-body rod protein FlgB [Thiomicrospira crunogena
           XCL-2]
 gi|78364101|gb|ABB42066.1| Flagellar basal-body rod protein FlgB [Thiomicrospira crunogena
           XCL-2]
          Length = 133

 Score = 36.4 bits (82), Expect = 1.4,   Method: Composition-based stats.
 Identities = 24/121 (19%), Positives = 38/121 (31%), Gaps = 6/121 (4%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           + +   I    LAV+  R  I++ NIANA T       D   RK +   E     G  + 
Sbjct: 1   MESVFGIHEHALAVRKERQSILANNIANADTPNFK-ARDVDWRKEMQAAEEDLSKGHYKP 59

Query: 64  KKIGVDQSTFVEEFDPGHP-----VANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
                +        +                +    V   +E A   E +  Y A L+ +
Sbjct: 60  DLKMTNSRHIEGFAEASTEDYLKYRMPTQPALDGNTVETHIEKAQFMENSMQYQATLEFL 119

Query: 119 K 119
            
Sbjct: 120 N 120


>gi|74311643|ref|YP_310062.1| flagellar hook-associated protein FlgK [Shigella sonnei Ss046]
 gi|73855120|gb|AAZ87827.1| flagellar hook-filament junction protein 1 [Shigella sonnei Ss046]
 gi|323165592|gb|EFZ51379.1| flagellar hook-associated protein FlgK [Shigella sonnei 53G]
          Length = 547

 Score = 36.4 bits (82), Expect = 1.4,   Method: Composition-based stats.
 Identities = 15/110 (13%), Positives = 35/110 (31%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           + +  + A SGL    A +   S NI++    G T  +    +   +         GV V
Sbjct: 1   MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGGWVGNGVYV 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
             +  +   F+          ++    +Y  ++ +        ++     
Sbjct: 61  SGVQREYDAFITNQLRAAQTQSSGLTARYEQMSKIDNMLSTSTSSLATQM 110


>gi|114566382|ref|YP_753536.1| hypothetical protein Swol_0846 [Syntrophomonas wolfei subsp. wolfei
           str. Goettingen]
 gi|114337317|gb|ABI68165.1| conserved hypothetical protein [Syntrophomonas wolfei subsp. wolfei
           str. Goettingen]
          Length = 138

 Score = 36.4 bits (82), Expect = 1.4,   Method: Composition-based stats.
 Identities = 22/119 (18%), Positives = 40/119 (33%), Gaps = 2/119 (1%)

Query: 14  GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTF 73
            + V + R  +I++NIANA T         +  K     E      G+ +      Q   
Sbjct: 17  AMDVGTLRNDVIADNIANADTPKFKRREVIFEEKMKKALEGTTDQLGLNLTNSRHIQMEG 76

Query: 74  VEE-FDPGHPVANASGIV-KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
                +P   V           NV++  E A M +    Y A  +++     ++   + 
Sbjct: 77  NNMDIEPEVRVLEDLTFRNDENNVDIDNEMAKMTKNKINYDAVSRSMSNEIRLLRMAIT 135


>gi|217977819|ref|YP_002361966.1| flagellar basal body rod protein [Methylocella silvestris BL2]
 gi|217503195|gb|ACK50604.1| flagellar basal body rod protein [Methylocella silvestris BL2]
          Length = 241

 Score = 36.4 bits (82), Expect = 1.4,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 32/68 (47%), Gaps = 7/68 (10%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          + +  +++ SGL     R+  I+ N+AN  T G       YR + + F+ ++  +G   V
Sbjct: 1  MQSGLYVSLSGLVALDRRLTTIAANVANQSTPG-------YRAEEVEFKSLLSKAGANPV 53

Query: 64 KKIGVDQS 71
            +   +S
Sbjct: 54 AFVSNGES 61


>gi|85710161|ref|ZP_01041226.1| flagellar proximal rod protein [Erythrobacter sp. NAP1]
 gi|85688871|gb|EAQ28875.1| flagellar proximal rod protein [Erythrobacter sp. NAP1]
          Length = 117

 Score = 36.4 bits (82), Expect = 1.4,   Method: Composition-based stats.
 Identities = 20/124 (16%), Positives = 33/124 (26%), Gaps = 13/124 (10%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
               I  + L ++S RM +I+ NIANA          P  +           +     + 
Sbjct: 4   TIFGIHGAALELRSQRMGVIASNIANAA--------TPGFKARDMDFNAALNARLETQRG 55

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
                      +            V+        E     E    Y A L  ++     +
Sbjct: 56  APAAFGEPELLYRRSAMPTLDGNTVELS-----REQVAFAENALAYSATLSFVQGKVSTI 110

Query: 126 TTTL 129
           T  L
Sbjct: 111 TRAL 114


>gi|330830297|ref|YP_004393249.1| flagellar hook-associated protein FlgK [Aeromonas veronii B565]
 gi|328805433|gb|AEB50632.1| Flagellar hook-associated protein FlgK [Aeromonas veronii B565]
          Length = 667

 Score = 36.4 bits (82), Expect = 1.5,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 34/91 (37%), Gaps = 5/91 (5%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
            I +SG+  Q   +Q  S NI N  + G         R  +    +  G+G ++ +++ 
Sbjct: 6  LGIGSSGVLAQQRLLQTTSNNIVNVNSQGY-----VRERTLVYTNTIGLGTGDIKTQRVI 60

Query: 68 VDQSTFVEEFDPGHPVANASGIVKYPNVNVL 98
           D        D     A+ +   +   V+ L
Sbjct: 61 NDYMQGEVRRDTSAYHASLTHYEQLAGVDSL 91



 Score = 34.1 bits (76), Expect = 6.0,   Method: Composition-based stats.
 Identities = 14/88 (15%), Positives = 31/88 (35%), Gaps = 2/88 (2%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPV--ANASGIVKYPNVNVLVETADMR 105
           T + +   + +    V ++G + S               +         VN+  E A++ 
Sbjct: 580 TTNDKMTFNQAYSGLVMEVGNNTSQAKTLLKANESKLIQSTGIFESVSGVNLEEEAANLI 639

Query: 106 ETNRLYMANLQTIKQSHDMMTTTLDLLR 133
              + Y A+ Q +  +  +  T L  +R
Sbjct: 640 RFQQSYAASAQIVSTAKTIFDTLLSSVR 667


>gi|304407695|ref|ZP_07389346.1| flagellar hook-associated protein FlgK [Paenibacillus
           curdlanolyticus YK9]
 gi|304343178|gb|EFM09021.1| flagellar hook-associated protein FlgK [Paenibacillus
           curdlanolyticus YK9]
          Length = 508

 Score = 36.4 bits (82), Expect = 1.5,   Method: Composition-based stats.
 Identities = 13/136 (9%), Positives = 37/136 (27%), Gaps = 7/136 (5%)

Query: 2   DYLIASAHIANSGLAVQSARMQ-IISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           D +    +IA S     +  +   +  N   A        +        S   + +G+  
Sbjct: 366 DIIDDPMNIATSLRTAVTNGVNETVKGNNVLANLMAGLKDTKFQFSPVASQNGITNGTID 425

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIV------KYPNVNVLVETADMRETNRLYMAN 114
                +        +E +                      V++  E +++ +    Y A 
Sbjct: 426 EFYASMIGQLGLQSQEANRQATNQQDIVTQVDSRRQSVSGVSLDEEMSELIKYQHAYSAA 485

Query: 115 LQTIKQSHDMMTTTLD 130
            + +    + +   ++
Sbjct: 486 ARFMTTIDETLDKVIN 501


>gi|257871286|ref|ZP_05650939.1| flagellar basal-body rod protein FlgB [Enterococcus gallinarum EG2]
 gi|257805450|gb|EEV34272.1| flagellar basal-body rod protein FlgB [Enterococcus gallinarum EG2]
          Length = 136

 Score = 36.4 bits (82), Expect = 1.5,   Method: Composition-based stats.
 Identities = 25/127 (19%), Positives = 45/127 (35%), Gaps = 8/127 (6%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           L+ + ++  + + V + R ++IS NIAN  T G       +       ++ +  SG    
Sbjct: 17  LLDTYNLLKTAMNVSAQRAELISSNIANVNTDGYKAKRIVF---ESELKQALASSGTDAA 73

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
            +  V Q       +    + +        NV++ VE  D       Y A    +     
Sbjct: 74  TEASVSQVKPKITENATTSIKDNGN-----NVDLEVEMLDQAANGLYYSALTAQVNGRLQ 128

Query: 124 MMTTTLD 130
           MM   L 
Sbjct: 129 MMNLVLS 135


>gi|325921021|ref|ZP_08182903.1| flagellar basal-body rod protein FlgB [Xanthomonas gardneri ATCC
           19865]
 gi|325548503|gb|EGD19475.1| flagellar basal-body rod protein FlgB [Xanthomonas gardneri ATCC
           19865]
          Length = 182

 Score = 36.4 bits (82), Expect = 1.5,   Method: Composition-based stats.
 Identities = 21/125 (16%), Positives = 40/125 (32%), Gaps = 1/125 (0%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
           + + +   I    L ++  RM++I+ N++N  T G       +     S E V  GS   
Sbjct: 52  NSISSFLGIHGDALPLREQRMKLIASNLSNVDTPGYKAKDMDFEAALKSAEGVRDGSLMQ 111

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ- 120
                  +               +    +    V+   E A        Y A+L  ++  
Sbjct: 112 TTDAKHYEIGNSGGLNPFQITRESDQPSLDGNTVDADAERAAYGRAALEYRASLSFLESK 171

Query: 121 SHDMM 125
              M+
Sbjct: 172 VRSML 176


>gi|91776310|ref|YP_546066.1| flagellar basal-body rod FlgF [Methylobacillus flagellatus KT]
 gi|91710297|gb|ABE50225.1| Flagellar basal-body rod FlgF [Methylobacillus flagellatus KT]
          Length = 246

 Score = 36.4 bits (82), Expect = 1.5,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 19/42 (45%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           ++  NVNV+ E  +M    R +    + I+ + +  T    +
Sbjct: 201 LEGSNVNVVEEMVNMISQARQFDLQTKLIQNAENNATKAGQI 242


>gi|262394933|ref|YP_003286787.1| flagellar hook-associated protein FlgK [Vibrio sp. Ex25]
 gi|262338527|gb|ACY52322.1| flagellar hook-associated protein FlgK [Vibrio sp. Ex25]
          Length = 646

 Score = 36.4 bits (82), Expect = 1.5,   Method: Composition-based stats.
 Identities = 21/120 (17%), Positives = 34/120 (28%), Gaps = 1/120 (0%)

Query: 13  SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQST 72
           S L  Q   +     NI+N  T G +  S                  GV V+ +      
Sbjct: 12  SVLTAQRQ-LNTTGHNISNVNTEGYSRQSVIQGTNDPRMFGGSTYGMGVHVENVRRSWDQ 70

Query: 73  FVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           F           NA+      N+++L        + ++     +       M  T  DL 
Sbjct: 71  FAVNELNLSSTNNANKTDTQDNLDMLSSMLSSVASKKIPENLNEWFDAVKTMADTPNDLG 130



 Score = 35.6 bits (80), Expect = 2.4,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 22/39 (56%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN+  E A+M +  + YMA+ + ++ ++D   T L L
Sbjct: 607 SGVNLDEEAANMMKFQQAYMASSRVMQAANDTFNTILQL 645


>gi|46578732|ref|YP_009540.1| flagellar basal body rod protein FlgB [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|46448144|gb|AAS94799.1| flagellar basal-body rod protein FlgB [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|311232604|gb|ADP85458.1| flagellar basal-body rod protein FlgB [Desulfovibrio vulgaris RCH1]
          Length = 136

 Score = 36.4 bits (82), Expect = 1.5,   Method: Composition-based stats.
 Identities = 27/122 (22%), Positives = 46/122 (37%), Gaps = 4/122 (3%)

Query: 1   MDYLIAS-AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
           M  +  S  ++    + +Q  R  ++  NIAN RT G  P  +    K +     +   G
Sbjct: 1   MKNMYESHVNLVGKVMDMQLQRQNVVMSNIANVRTPGYKP-RELEFEKELQSALGLDAKG 59

Query: 60  GVRVKKIGVDQSTFVEE-FDPGHPVANASGIVKYPN-VNVLVETADMRETNRLYMANLQT 117
            + + +     + F  E F P         +V   + VN+  E   M + +  Y A    
Sbjct: 60  RMTITEKQHLPAVFDPEGFGPEWSKTFKPRVVHGEDRVNLDKEMTKMAKASLQYNALATV 119

Query: 118 IK 119
           IK
Sbjct: 120 IK 121


>gi|90422390|ref|YP_530760.1| flagellar hook protein FlgE [Rhodopseudomonas palustris BisB18]
 gi|90104404|gb|ABD86441.1| flagellar basal body FlaE [Rhodopseudomonas palustris BisB18]
          Length = 419

 Score = 36.4 bits (82), Expect = 1.5,   Method: Composition-based stats.
 Identities = 19/59 (32%), Positives = 28/59 (47%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
            L  +   A S L+ QS+ M +IS+NIAN++T G    S  ++    S       S G
Sbjct: 1  MSLSGALSSAISALSAQSSAMAMISDNIANSQTVGYKTTSASFQALVTSSSSATTYSSG 59


>gi|224532252|ref|ZP_03672884.1| flagellar hook-associated protein FlgK [Borrelia valaisiana
          VS116]
 gi|224511717|gb|EEF82123.1| flagellar hook-associated protein FlgK [Borrelia valaisiana
          VS116]
          Length = 627

 Score = 36.4 bits (82), Expect = 1.5,   Method: Composition-based stats.
 Identities = 13/80 (16%), Positives = 24/80 (30%), Gaps = 7/80 (8%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDP-------YRRKTISFEE 53
          MD   +   I    L      M  +  N++NA   G +            Y  +    ++
Sbjct: 1  MDSTFSGIEIGKRSLFAHKDAMNTVGHNLSNATKPGYSRQRVTMKTTTPLYAPQLNRAKK 60

Query: 54 VMHGSGGVRVKKIGVDQSTF 73
                G+ V+ I   +   
Sbjct: 61 QGQLGQGIMVQSIDRVKDEL 80


>gi|42780831|ref|NP_978078.1| flagellar hook-associated protein FlgK [Bacillus cereus ATCC 10987]
 gi|222095362|ref|YP_002529422.1| flagellar hook-associated protein flgk [Bacillus cereus Q1]
 gi|42736751|gb|AAS40686.1| flagellar hook-associated protein, putative [Bacillus cereus ATCC
           10987]
 gi|221239420|gb|ACM12130.1| flagellar hook-associated protein 1 [Bacillus cereus Q1]
          Length = 432

 Score = 36.4 bits (82), Expect = 1.5,   Method: Composition-based stats.
 Identities = 7/40 (17%), Positives = 20/40 (50%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            VN+  E  ++    + ++AN + I   +++  +   ++R
Sbjct: 393 GVNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSLFSIIR 432



 Score = 34.8 bits (78), Expect = 3.6,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 30/91 (32%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
          +   SG+      +Q   +N++N  T G       Y     S         G  V+ +GV
Sbjct: 7  NTPLSGMLAAQMGLQTTRQNLSNIHTPGYVRQMVNYGSVGASNGHTPEQRIGYGVQTLGV 66

Query: 69 DQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
          D+ T   +    +   +      Y N  +  
Sbjct: 67 DRITDEVKTKQFNDQLSQLSYYNYKNSVLSR 97


>gi|284989567|ref|YP_003408121.1| flagellar hook-associated protein FlgK [Geodermatophilus obscurus
          DSM 43160]
 gi|284062812|gb|ADB73750.1| flagellar hook-associated protein FlgK [Geodermatophilus obscurus
          DSM 43160]
          Length = 482

 Score = 36.4 bits (82), Expect = 1.5,   Method: Composition-based stats.
 Identities = 12/70 (17%), Positives = 22/70 (31%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M       + A + L      + +  +NIAN  T G +      R    +    +H    
Sbjct: 1  MSSTFGGLNTARTALWASQRGLDVTGQNIANVNTDGYSRQRVELRAMGGTAVPAIHSVSS 60

Query: 61 VRVKKIGVDQ 70
               +  +Q
Sbjct: 61 PVGNGVDANQ 70



 Score = 36.0 bits (81), Expect = 1.6,   Method: Composition-based stats.
 Identities = 7/38 (18%), Positives = 15/38 (39%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             VN+  E  +M      Y A  + +    + + T ++
Sbjct: 438 SGVNLDEEMTNMLSFQHAYSAAARMVTAIDEALDTLIN 475


>gi|222095395|ref|YP_002529455.1| flagellar basal body rod protein flgg [Bacillus cereus Q1]
 gi|221239453|gb|ACM12163.1| flagellar basal-body rod protein [Bacillus cereus Q1]
          Length = 267

 Score = 36.4 bits (82), Expect = 1.5,   Method: Composition-based stats.
 Identities = 10/64 (15%), Positives = 25/64 (39%), Gaps = 1/64 (1%)

Query: 71  STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT-TL 129
           +       P       + +++  NV++  E AD+    R+  A+ + +     +      
Sbjct: 204 AEGNIADLPNGTGLVKNHMLENSNVDMTKEMADLMTDQRMISASQRVMTSFDKIYEKEAN 263

Query: 130 DLLR 133
           ++LR
Sbjct: 264 EILR 267


>gi|170725961|ref|YP_001759987.1| flagellar hook-associated protein FlgK [Shewanella woodyi ATCC
          51908]
 gi|169811308|gb|ACA85892.1| flagellar hook-associated protein FlgK [Shewanella woodyi ATCC
          51908]
          Length = 637

 Score = 36.4 bits (82), Expect = 1.5,   Method: Composition-based stats.
 Identities = 17/95 (17%), Positives = 30/95 (31%), Gaps = 7/95 (7%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          +   +IA +G+    +++ + S NIANA T G       Y R+      + +   G    
Sbjct: 3  MDLLNIARTGVLASQSQLAVTSNNIANANTQG-------YHRQVAEQSSLDNQRLGGNFF 55

Query: 65 KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
            G   S     ++         G           
Sbjct: 56 GSGTYISDVKRIYNDYAARELRIGQTTVSEAQATQ 90


>gi|309779453|ref|ZP_07674214.1| flagellar hook-associated protein FlgK [Ralstonia sp. 5_7_47FAA]
 gi|308921694|gb|EFP67330.1| flagellar hook-associated protein FlgK [Ralstonia sp. 5_7_47FAA]
          Length = 645

 Score = 36.4 bits (82), Expect = 1.5,   Method: Composition-based stats.
 Identities = 5/38 (13%), Positives = 20/38 (52%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            V++  E  ++ +  + Y A+ + ++ ++ +  + L +
Sbjct: 605 GVSLDEEAMNLMKYQQAYQASAKVMQTANSLFGSLLSI 642



 Score = 34.8 bits (78), Expect = 3.6,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 23/59 (38%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
           +I  SGL V    +Q+   NIANA T G +            +  V +   G  V  +
Sbjct: 6  LNIGASGLRVADINLQVTGNNIANASTPGYSRQEAVQTENIPLYAGVGYLGQGANVTTV 64


>gi|187926948|ref|YP_001893293.1| flagellar hook-associated protein FlgK [Ralstonia pickettii 12J]
 gi|241665277|ref|YP_002983636.1| flagellar hook-associated protein FlgK [Ralstonia pickettii 12D]
 gi|187728702|gb|ACD29866.1| flagellar hook-associated protein FlgK [Ralstonia pickettii 12J]
 gi|240867304|gb|ACS64964.1| flagellar hook-associated protein FlgK [Ralstonia pickettii 12D]
          Length = 645

 Score = 36.4 bits (82), Expect = 1.5,   Method: Composition-based stats.
 Identities = 17/81 (20%), Positives = 28/81 (34%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
           +I  +GL V    +Q+   NIANA T G +            +  V +   G  V  + 
Sbjct: 6  LNIGATGLRVADINLQVTGNNIANANTPGYSRQEAVQTENIPLYAGVGYLGQGANVTTVK 65

Query: 68 VDQSTFVEEFDPGHPVANASG 88
               F+         A ++ 
Sbjct: 66 RIYDQFLTAQVQNGQAATSAA 86



 Score = 35.2 bits (79), Expect = 3.3,   Method: Composition-based stats.
 Identities = 15/112 (13%), Positives = 36/112 (32%), Gaps = 4/112 (3%)

Query: 24  IISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV----KKIGVDQSTFVEEFDP 79
            IS N AN+   G+       R  T+                    +  + +        
Sbjct: 531 TISANTANSTDNGNASALASLRNATLLDGGTASIGTAWNSLVTQVGVQANTAGTNLTSQK 590

Query: 80  GHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
               ++ S       VN+  E  ++ +  + Y A  + ++ ++ +  + L +
Sbjct: 591 ALLASSTSQQQSVSGVNLDDEAMNLMKYQQAYQAAAKVMQTANSLFDSLLSI 642


>gi|49480334|ref|YP_035891.1| flagellar basal body rod protein FlgG [Bacillus thuringiensis
           serovar konkukian str. 97-27]
 gi|49331890|gb|AAT62536.1| flagellar basal-body rod protein [Bacillus thuringiensis serovar
           konkukian str. 97-27]
          Length = 257

 Score = 36.4 bits (82), Expect = 1.5,   Method: Composition-based stats.
 Identities = 10/64 (15%), Positives = 25/64 (39%), Gaps = 1/64 (1%)

Query: 71  STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT-TL 129
           +       P       + +++  NV++  E AD+    R+  A+ + +     +      
Sbjct: 194 AEGNIADLPNGVGTVKNYMLENSNVDMTKEMADLMTDQRMISASQRVMTSFDKIYEKEAN 253

Query: 130 DLLR 133
           ++LR
Sbjct: 254 EILR 257


>gi|90021849|ref|YP_527676.1| hypothetical protein Sde_2204 [Saccharophagus degradans 2-40]
 gi|89951449|gb|ABD81464.1| Flagellar hook-associated protein [Saccharophagus degradans 2-40]
          Length = 920

 Score = 36.0 bits (81), Expect = 1.5,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 25/70 (35%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
            I+ +GL    + +     NI+NA   G +           +  +  +   GV V  I 
Sbjct: 6  LGISVTGLRASQSALSTTGHNISNANVDGYSRQRVIAETNPATRADGGYVGNGVNVASIE 65

Query: 68 VDQSTFVEEF 77
             ++FV   
Sbjct: 66 RIVNSFVTTQ 75



 Score = 36.0 bits (81), Expect = 1.9,   Method: Composition-based stats.
 Identities = 16/82 (19%), Positives = 37/82 (45%), Gaps = 2/82 (2%)

Query: 51  FEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP--NVNVLVETADMRETN 108
               +  S G  ++++G+D S+     +    V   +  ++     VN+  E A++    
Sbjct: 837 KSASLSESYGSLIERVGIDTSSSRINMEASKQVLEHTTAMRNSISAVNLDEEAANLIRFE 896

Query: 109 RLYMANLQTIKQSHDMMTTTLD 130
           ++Y AN Q I  + ++  T ++
Sbjct: 897 QMYSANAQVISVARNLFDTLIN 918


>gi|300816784|ref|ZP_07097004.1| flagellar hook-associated protein FlgK [Escherichia coli MS 107-1]
 gi|309798076|ref|ZP_07692451.1| flagellar hook-associated protein FlgK [Escherichia coli MS 145-7]
 gi|300530558|gb|EFK51620.1| flagellar hook-associated protein FlgK [Escherichia coli MS 107-1]
 gi|308118359|gb|EFO55621.1| flagellar hook-associated protein FlgK [Escherichia coli MS 145-7]
          Length = 547

 Score = 36.0 bits (81), Expect = 1.6,   Method: Composition-based stats.
 Identities = 15/110 (13%), Positives = 35/110 (31%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           + +  + A SGL    A +   S NI++    G T  +    +   +         GV V
Sbjct: 1   MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGGWVGNGVNV 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
             +  +   F+          ++    +Y  ++ +        ++     
Sbjct: 61  SGVQREYDAFITNQLRAAQTQSSGLTARYEQMSKIDNMLSTSTSSLATQM 110


>gi|289208120|ref|YP_003460186.1| flagellar hook-associated protein FlgK [Thioalkalivibrio sp.
          K90mix]
 gi|288943751|gb|ADC71450.1| flagellar hook-associated protein FlgK [Thioalkalivibrio sp.
          K90mix]
          Length = 640

 Score = 36.0 bits (81), Expect = 1.6,   Method: Composition-based stats.
 Identities = 17/84 (20%), Positives = 27/84 (32%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          ++ + I  S L      +   S NIAN+ T G +         +  F    +   GV V 
Sbjct: 1  MSVSGIGTSALLAFQRAIGTTSNNIANSATEGYSRQRTELGNLSPQFLGGSYQGQGVGVD 60

Query: 65 KIGVDQSTFVEEFDPGHPVANASG 88
           I      FV           ++ 
Sbjct: 61 AIRRISDDFVNTQLRTSISGQSNA 84


>gi|299066532|emb|CBJ37722.1| putative flagellar basal-body rod protein flgB [Ralstonia
           solanacearum CMR15]
          Length = 128

 Score = 36.0 bits (81), Expect = 1.6,   Method: Composition-based stats.
 Identities = 21/120 (17%), Positives = 46/120 (38%), Gaps = 8/120 (6%)

Query: 14  GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTF 73
            L   S R Q I+ NIAN+ T G  P    +  +    + ++ G  G     +       
Sbjct: 16  ALDAASLRQQAIAANIANSETAGYVPVGVTFDAQMAEMQRLLDGGSGQLDAGVLE---AM 72

Query: 74  VEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
                P   +A          + + VE A++ +    Y A ++ + + + ++++ +   +
Sbjct: 73  QPRLQPVTDMAGVPA-----KIMLDVEVANLAQNAVQYQALVKGLSKHYAILSSAVSDGK 127


>gi|85058017|ref|YP_453719.1| flagellar hook-associated protein 1 FlgK [Sodalis glossinidius str.
           'morsitans']
 gi|84778537|dbj|BAE73314.1| flagellar hook-associated protein 1 FlgK [Sodalis glossinidius str.
           'morsitans']
          Length = 556

 Score = 36.0 bits (81), Expect = 1.6,   Method: Composition-based stats.
 Identities = 18/104 (17%), Positives = 37/104 (35%), Gaps = 3/104 (2%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           ++   +IA+SGL      + +I  N+ANA     +  +              H   GVRV
Sbjct: 1   MLNLYYIASSGLQTGQQALSVIGNNLANATNPYYSRQNIILGAAGGRVTSTGHIGNGVRV 60

Query: 64  KKIGVDQSTF---VEEFDPGHPVANASGIVKYPNVNVLVETADM 104
           + +      +             A+++   K  ++++     D 
Sbjct: 61  EGVARAFDEYANERVRGTETLLRASSAHYDKMSSLDLEFSRTDN 104


>gi|292492360|ref|YP_003527799.1| flagellar basal-body rod protein FlgB [Nitrosococcus halophilus
           Nc4]
 gi|291580955|gb|ADE15412.1| flagellar basal-body rod protein FlgB [Nitrosococcus halophilus
           Nc4]
          Length = 133

 Score = 36.0 bits (81), Expect = 1.6,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 48/137 (35%), Gaps = 15/137 (10%)

Query: 1   MDYLI-ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
           M     ++  I    L++ S R ++++ N+ANA T G       Y+ + I F+  +  + 
Sbjct: 1   MSISFDSALGIHPYALSLWSRRAELLAANLANADTPG-------YKARDIDFKTALQQAQ 53

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGI-------VKYPNVNVLVETADMRETNRLYM 112
           G                   GHP    +         +    V+  VE     +    Y 
Sbjct: 54  GQGAALPLQVTHGRHLPSAAGHPPGGEALYRLPLQASIDGNTVDSQVEHGKFMQNALQYQ 113

Query: 113 ANLQTIKQSHDMMTTTL 129
           A+L  +  S   + + L
Sbjct: 114 ASLHFLSGSFKGLQSAL 130


>gi|229155343|ref|ZP_04283453.1| Flagellar basal-body rod protein flgG [Bacillus cereus ATCC 4342]
 gi|228628058|gb|EEK84775.1| Flagellar basal-body rod protein flgG [Bacillus cereus ATCC 4342]
          Length = 257

 Score = 36.0 bits (81), Expect = 1.6,   Method: Composition-based stats.
 Identities = 10/64 (15%), Positives = 25/64 (39%), Gaps = 1/64 (1%)

Query: 71  STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT-TL 129
           +       P       + +++  NV++  E AD+    R+  A+ + +     +      
Sbjct: 194 AEGNITDLPNGTGLVKNHMLENSNVDMTKEMADLMTDQRMISASQRVMTSFDKIYEKEAN 253

Query: 130 DLLR 133
           ++LR
Sbjct: 254 EILR 257


>gi|157164118|ref|YP_001467097.1| flagellar basal-body rod protein [Campylobacter concisus 13826]
 gi|112799948|gb|EAT97292.1| flagellar basal-body rod protein [Campylobacter concisus 13826]
          Length = 269

 Score = 36.0 bits (81), Expect = 1.6,   Method: Composition-based stats.
 Identities = 11/61 (18%), Positives = 22/61 (36%)

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
            +V     +   F +  +     +   G  +  NVN ++E   + ET RL     + +  
Sbjct: 193 KKVGDNLFETRNFDDITELDEADSVMQGYAQMSNVNPVLEMVGLIETQRLVDMYQKVMTS 252

Query: 121 S 121
            
Sbjct: 253 H 253



 Score = 34.8 bits (78), Expect = 3.7,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 18/38 (47%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGS 41
          +    + A +G+  Q  R+ +IS N+AN  T G     
Sbjct: 1  MQNGYYQATAGMVTQFNRLNVISNNLANVNTIGYKRND 38


>gi|27378811|ref|NP_770340.1| flagellar hook protein FlgE [Bradyrhizobium japonicum USDA 110]
 gi|27351960|dbj|BAC48965.1| flgE [Bradyrhizobium japonicum USDA 110]
          Length = 421

 Score = 36.0 bits (81), Expect = 1.6,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 26/64 (40%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            L  +   A S L+ QS  + +IS+NIAN+ TTG    S  +     +       + G 
Sbjct: 1  MSLTGALSSAISALSAQSQSLSMISDNIANSDTTGYKTTSAMFDALVTASSNATSYASGG 60

Query: 62 RVKK 65
              
Sbjct: 61 VTVS 64


>gi|324325756|gb|ADY21016.1| flagellar hook-associated protein FlgK [Bacillus thuringiensis
           serovar finitimus YBT-020]
          Length = 432

 Score = 36.0 bits (81), Expect = 1.6,   Method: Composition-based stats.
 Identities = 7/40 (17%), Positives = 20/40 (50%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            VN+  E  ++    + ++AN + I   +++  +   ++R
Sbjct: 393 GVNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSLFSIIR 432



 Score = 34.1 bits (76), Expect = 6.0,   Method: Composition-based stats.
 Identities = 16/91 (17%), Positives = 29/91 (31%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
          +   SG+      +Q   +N++N  T G       Y     S         G  V+ + V
Sbjct: 7  NTPLSGMLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGSVGASNGHTPEQRIGYGVQTLSV 66

Query: 69 DQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
          D+ T   +    +   +      Y N  +  
Sbjct: 67 DRITDEVKTKQFNDQLSQLSYYNYKNSVLSR 97


>gi|229138438|ref|ZP_04267027.1| Flagellar hook-associated protein FlgK [Bacillus cereus BDRD-ST26]
 gi|228644975|gb|EEL01218.1| Flagellar hook-associated protein FlgK [Bacillus cereus BDRD-ST26]
          Length = 420

 Score = 36.0 bits (81), Expect = 1.6,   Method: Composition-based stats.
 Identities = 7/40 (17%), Positives = 20/40 (50%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            VN+  E  ++    + ++AN + I   +++  +   ++R
Sbjct: 381 GVNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSLFSIIR 420


>gi|119899030|ref|YP_934243.1| flagellar basal-body rod protein FlgB [Azoarcus sp. BH72]
 gi|119671443|emb|CAL95356.1| flagellar basal-body rod protein FlgB [Azoarcus sp. BH72]
          Length = 133

 Score = 36.0 bits (81), Expect = 1.6,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 36/123 (29%)

Query: 8   AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
                + L +Q+ R Q+++ NIANA T         +R                  +   
Sbjct: 9   LQFHQTALNLQAHRQQLLASNIANADTPHYKARDIDFREALQGALGKQSNLALATTQSRH 68

Query: 68  VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
           +                     V    VN+ VE A   E    Y A++  I      M T
Sbjct: 69  IAGGGGDVLEGATKYRTELQSAVDGNTVNMDVERAAFAENAIHYEASITFINGLLRGMQT 128

Query: 128 TLD 130
            + 
Sbjct: 129 AIS 131


>gi|320179217|gb|EFW54175.1| Flagellar hook-associated protein FlgK [Shigella boydii ATCC 9905]
 gi|332089154|gb|EGI94263.1| flagellar hook-associated protein FlgK [Shigella boydii 5216-82]
          Length = 547

 Score = 36.0 bits (81), Expect = 1.6,   Method: Composition-based stats.
 Identities = 15/110 (13%), Positives = 35/110 (31%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           + +  + A SGL    A +   S NI++    G T  +    +   +         GV V
Sbjct: 1   MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGGWVGNGVYV 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
             +  +   F+          ++    +Y  ++ +        ++     
Sbjct: 61  SGVQREYDAFITNQLRAAQTQSSGLTARYEQMSKIDNMLSTSTSSLATQM 110


>gi|315618252|gb|EFU98842.1| flagellar hook-associated protein FlgK [Escherichia coli 3431]
          Length = 547

 Score = 36.0 bits (81), Expect = 1.6,   Method: Composition-based stats.
 Identities = 15/110 (13%), Positives = 35/110 (31%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           + +  + A SGL    A +   S NI++    G T  +    +   +         GV V
Sbjct: 1   MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGGWVGNGVYV 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
             +  +   F+          ++    +Y  ++ +        ++     
Sbjct: 61  SGVQREYDAFITNQLRAAQTQSSGLTARYEQMSKIDNMLSTSTSSLATQM 110


>gi|306518947|ref|ZP_07405294.1| flagellar basal body rod protein FlgG [Clostridium difficile
          QCD-32g58]
          Length = 182

 Score = 36.0 bits (81), Expect = 1.6,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 22/41 (53%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
          +    + + + L+   +++ IIS NIAN+ +TG    +  Y
Sbjct: 1  MYTMFYTSKTALSANQSKLDIISNNIANSDSTGYKKINMEY 41


>gi|291282102|ref|YP_003498920.1| Flagellar hook-associated protein FlgK [Escherichia coli O55:H7
           str. CB9615]
 gi|290761975|gb|ADD55936.1| Flagellar hook-associated protein FlgK [Escherichia coli O55:H7
           str. CB9615]
          Length = 547

 Score = 36.0 bits (81), Expect = 1.6,   Method: Composition-based stats.
 Identities = 15/110 (13%), Positives = 35/110 (31%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           + +  + A SGL    A +   S NI++    G T  +    +   +         GV V
Sbjct: 1   MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGGWVGNGVYV 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
             +  +   F+          ++    +Y  ++ +        ++     
Sbjct: 61  SGVQREYDAFITNQLRAAQTQSSGLTARYEQMSKIDNMLSTSTSSLATQM 110


>gi|228933056|ref|ZP_04095919.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis
           serovar andalousiensis BGSC 4AW1]
 gi|228826657|gb|EEM72428.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis
           serovar andalousiensis BGSC 4AW1]
          Length = 249

 Score = 36.0 bits (81), Expect = 1.6,   Method: Composition-based stats.
 Identities = 10/64 (15%), Positives = 25/64 (39%), Gaps = 1/64 (1%)

Query: 71  STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT-TL 129
           +       P       + +++  NV++  E AD+    R+  A+ + +     +      
Sbjct: 186 AEGNIADLPNGVGTVKNYMLENSNVDMTKEMADLMTDQRMISASQRVMTSFDKIYEKEAN 245

Query: 130 DLLR 133
           ++LR
Sbjct: 246 EILR 249


>gi|209773324|gb|ACI84974.1| flagellar hook-filament junction protein 1 FlgK [Escherichia coli]
 gi|320659346|gb|EFX26915.1| flagellar hook-associated protein FlgK [Escherichia coli O55:H7
           str. USDA 5905]
          Length = 547

 Score = 36.0 bits (81), Expect = 1.6,   Method: Composition-based stats.
 Identities = 15/110 (13%), Positives = 35/110 (31%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           + +  + A SGL    A +   S NI++    G T  +    +   +         GV V
Sbjct: 1   MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGGWVGNGVYV 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
             +  +   F+          ++    +Y  ++ +        ++     
Sbjct: 61  SGVQREYDAFITNQLRAAQTQSSGLTARYEQMSKIDNMLSTSTSSLATQM 110


>gi|218694616|ref|YP_002402283.1| flagellar hook-associated protein FlgK [Escherichia coli 55989]
 gi|307310140|ref|ZP_07589790.1| flagellar hook-associated protein FlgK [Escherichia coli W]
 gi|218351348|emb|CAU97054.1| flagellar hook-filament junction protein 1 [Escherichia coli 55989]
 gi|306909858|gb|EFN40352.1| flagellar hook-associated protein FlgK [Escherichia coli W]
 gi|315060360|gb|ADT74687.1| flagellar hook-filament junction protein 1 [Escherichia coli W]
 gi|320200978|gb|EFW75562.1| Flagellar hook-associated protein FlgK [Escherichia coli EC4100B]
 gi|323379079|gb|ADX51347.1| flagellar hook-associated protein FlgK [Escherichia coli KO11]
          Length = 547

 Score = 36.0 bits (81), Expect = 1.6,   Method: Composition-based stats.
 Identities = 15/110 (13%), Positives = 35/110 (31%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           + +  + A SGL    A +   S NI++    G T  +    +   +         GV V
Sbjct: 1   MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGGWVGNGVYV 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
             +  +   F+          ++    +Y  ++ +        ++     
Sbjct: 61  SGVQREYDAFITNQLRAAQTQSSGLTARYEQMSKIDNMLSTSTSSLATQM 110


>gi|217959222|ref|YP_002337770.1| flagellar hook-associated protein FlgK [Bacillus cereus AH187]
 gi|217064765|gb|ACJ79015.1| putative flagellar hook-associated protein [Bacillus cereus AH187]
          Length = 432

 Score = 36.0 bits (81), Expect = 1.6,   Method: Composition-based stats.
 Identities = 7/40 (17%), Positives = 20/40 (50%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            VN+  E  ++    + ++AN + I   +++  +   ++R
Sbjct: 393 GVNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSLFSIIR 432



 Score = 34.8 bits (78), Expect = 3.8,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 30/91 (32%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
          +   SG+      +Q   +N++N  T G       Y     S         G  V+ +GV
Sbjct: 7  NTPLSGMLAAQMGLQTTRQNLSNIHTPGYVRQMVNYGSVGASNGHTPEQRIGYGVQTLGV 66

Query: 69 DQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
          D+ T   +    +   +      Y N  +  
Sbjct: 67 DRITDEVKTKQFNDQLSQLSYYNYKNSVLSR 97


>gi|194432475|ref|ZP_03064762.1| flagellar hook-associated protein FlgK [Shigella dysenteriae 1012]
 gi|194419362|gb|EDX35444.1| flagellar hook-associated protein FlgK [Shigella dysenteriae 1012]
 gi|332092937|gb|EGI98005.1| flagellar hook-associated protein FlgK [Shigella dysenteriae
           155-74]
          Length = 547

 Score = 36.0 bits (81), Expect = 1.6,   Method: Composition-based stats.
 Identities = 15/110 (13%), Positives = 35/110 (31%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           + +  + A SGL    A +   S NI++    G T  +    +   +         GV V
Sbjct: 1   MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGGWVGNGVYV 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
             +  +   F+          ++    +Y  ++ +        ++     
Sbjct: 61  SGVQREYDAFITNQLRAAQTQSSGLTARYEQMSKIDNMLSTSTSSLATQM 110


>gi|308186399|ref|YP_003930530.1| Flagellar hook-associated protein 1 (HAP1) [Pantoea vagans C9-1]
 gi|308056909|gb|ADO09081.1| Flagellar hook-associated protein 1 (HAP1) [Pantoea vagans C9-1]
          Length = 550

 Score = 36.0 bits (81), Expect = 1.6,   Method: Composition-based stats.
 Identities = 14/96 (14%), Positives = 37/96 (38%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          + +  + A SGL+   A +   S NI+N    G +  +    +   + +   +   GV +
Sbjct: 1  MSSIINSAMSGLSAAQAALSTTSNNISNYTVAGYSRQTTVLAQANSTLQGNSYYGNGVNI 60

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
            +  +   F+     G     ++   ++  ++ + 
Sbjct: 61 TGVQREYDAFIATQLRGSSANYSAVSTQHSQISNID 96


>gi|283477483|emb|CAY73399.1| Flagellar hook-filament junction protein 1 [Erwinia pyrifoliae DSM
           12163]
          Length = 427

 Score = 36.0 bits (81), Expect = 1.6,   Method: Composition-based stats.
 Identities = 16/87 (18%), Positives = 30/87 (34%), Gaps = 2/87 (2%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP--NVNVLVETADMR 105
            +  +  +  S    V  +G   S    ++     V N           VN+  E   + 
Sbjct: 341 KLIGKATLTESYASLVSGLGSSTSALKADYATAGSVLNELTTKWQSVVGVNLEDEYVTLS 400

Query: 106 ETNRLYMANLQTIKQSHDMMTTTLDLL 132
              + Y AN Q ++ +  M+ T L + 
Sbjct: 401 MFEKYYQANAQVLQTATTMLDTLLAIK 427


>gi|295399806|ref|ZP_06809787.1| flagellar basal-body rod protein FlgB [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|312111682|ref|YP_003989998.1| flagellar basal-body rod protein FlgB [Geobacillus sp. Y4.1MC1]
 gi|294978209|gb|EFG53806.1| flagellar basal-body rod protein FlgB [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|311216783|gb|ADP75387.1| flagellar basal-body rod protein FlgB [Geobacillus sp. Y4.1MC1]
          Length = 130

 Score = 36.0 bits (81), Expect = 1.6,   Method: Composition-based stats.
 Identities = 23/122 (18%), Positives = 43/122 (35%), Gaps = 9/122 (7%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M     +  +   GL   + R ++I+ NIAN  T       +   +      E+      
Sbjct: 1   MALFSRTITMLEQGLDYAALREKVIANNIANVDT------PNYKAKSVQFRTELDRALQP 54

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVK---YPNVNVLVETADMRETNRLYMANLQT 117
           +  K+       F  +      V   + +V      NV++  E AD+ E    Y A ++ 
Sbjct: 55  LEAKRTHPKHLPFHHQISNQFFVTKRTDVVYNHNGNNVDIDKEMADLAENQIYYNALVER 114

Query: 118 IK 119
           + 
Sbjct: 115 LN 116


>gi|254462007|ref|ZP_05075423.1| flagellar basal-body rod protein FlgF [Rhodobacterales bacterium
           HTCC2083]
 gi|206678596|gb|EDZ43083.1| flagellar basal-body rod protein FlgF [Rhodobacteraceae bacterium
           HTCC2083]
          Length = 237

 Score = 36.0 bits (81), Expect = 1.6,   Method: Composition-based stats.
 Identities = 10/54 (18%), Positives = 20/54 (37%)

Query: 77  FDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            +P        G ++  NVN + + A M E  R Y       +  ++ +   + 
Sbjct: 180 TEPNFDARVRQGFLEGSNVNPMSQIARMIEVQRAYEMGQSFAETENERLRNAVR 233


>gi|300918686|ref|ZP_07135266.1| flagellar hook-associated protein FlgK [Escherichia coli MS 115-1]
 gi|300414160|gb|EFJ97470.1| flagellar hook-associated protein FlgK [Escherichia coli MS 115-1]
          Length = 547

 Score = 36.0 bits (81), Expect = 1.6,   Method: Composition-based stats.
 Identities = 15/110 (13%), Positives = 35/110 (31%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           + +  + A SGL    A +   S NI++    G T  +    +   +         GV V
Sbjct: 1   MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGGWVGNGVYV 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
             +  +   F+          ++    +Y  ++ +        ++     
Sbjct: 61  SGVQREYDAFITNQLRAAQTQSSGLTARYEQMSKIDNMLSTSTSSLATQM 110


>gi|293433372|ref|ZP_06661800.1| flagellar hook-associated protein FlgK [Escherichia coli B088]
 gi|291324191|gb|EFE63613.1| flagellar hook-associated protein FlgK [Escherichia coli B088]
          Length = 547

 Score = 36.0 bits (81), Expect = 1.6,   Method: Composition-based stats.
 Identities = 15/110 (13%), Positives = 35/110 (31%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           + +  + A SGL    A +   S NI++    G T  +    +   +         GV V
Sbjct: 1   MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGGWVGNGVYV 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
             +  +   F+          ++    +Y  ++ +        ++     
Sbjct: 61  SGVQREYDAFITNQLRAAQTQSSGLTARYEQMSKIDNMLSTSTSSLATQM 110


>gi|269138588|ref|YP_003295288.1| flagellar hook-associated protein [Edwardsiella tarda EIB202]
 gi|267984248|gb|ACY84077.1| flagellar hook-associated protein [Edwardsiella tarda EIB202]
          Length = 546

 Score = 36.0 bits (81), Expect = 1.6,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 19/39 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN+  E  D+    + YMAN Q I+ +  M    LD+
Sbjct: 507 SGVNLDEEYGDLVRFQQYYMANAQVIQTATSMFNALLDI 545



 Score = 33.7 bits (75), Expect = 8.7,   Method: Composition-based stats.
 Identities = 16/99 (16%), Positives = 32/99 (32%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +    + A SGL+     + + S NI N  T G    +  +     +         GV V
Sbjct: 1   MANLINNAMSGLSAAQTALAVTSNNINNVYTAGYNRQTVSFAENNGTSTPAGFIGNGVVV 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETA 102
             I  + + F+           A+    +  ++ +    
Sbjct: 61  SGINREYNQFIVNQLRQGQSDLATTSTYHKQISQIDNLL 99


>gi|262276410|ref|ZP_06054219.1| flagellar hook-associated protein FlgK [Grimontia hollisae CIP
           101886]
 gi|262220218|gb|EEY71534.1| flagellar hook-associated protein FlgK [Grimontia hollisae CIP
           101886]
          Length = 625

 Score = 36.0 bits (81), Expect = 1.6,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 22/43 (51%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +   VN+  E A+M +    YMA+ + +  +++   T L+  R
Sbjct: 583 EISGVNLDEEAANMMKFQHAYMASSRIMTAANETFETLLNATR 625


>gi|229195985|ref|ZP_04322737.1| Flagellar basal-body rod protein flgG [Bacillus cereus m1293]
 gi|228587367|gb|EEK45433.1| Flagellar basal-body rod protein flgG [Bacillus cereus m1293]
          Length = 257

 Score = 36.0 bits (81), Expect = 1.6,   Method: Composition-based stats.
 Identities = 10/64 (15%), Positives = 25/64 (39%), Gaps = 1/64 (1%)

Query: 71  STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT-TL 129
           +       P       + +++  NV++  E AD+    R+  A+ + +     +      
Sbjct: 194 AEGNIADLPNGTGLVKNHMLENSNVDMTKEMADLMTNQRMISASQRVMTSFDKIYEKEAN 253

Query: 130 DLLR 133
           ++LR
Sbjct: 254 EILR 257


>gi|84514827|ref|ZP_01002190.1| FlgK flagellar hook-associated protein 1 [Loktanella
          vestfoldensis SKA53]
 gi|84510986|gb|EAQ07440.1| FlgK flagellar hook-associated protein 1 [Loktanella
          vestfoldensis SKA53]
          Length = 1421

 Score = 36.0 bits (81), Expect = 1.6,   Method: Composition-based stats.
 Identities = 9/33 (27%), Positives = 15/33 (45%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          + +   I  S +  Q   + +  +NI NA T G
Sbjct: 1  MASLLDIGRSAVQAQREALNVTGQNIVNANTEG 33


>gi|193064539|ref|ZP_03045619.1| flagellar hook-associated protein FlgK [Escherichia coli E22]
 gi|194428412|ref|ZP_03060952.1| flagellar hook-associated protein FlgK [Escherichia coli B171]
 gi|260843322|ref|YP_003221100.1| flagellar hook-filament junction protein FlgK [Escherichia coli
           O103:H2 str. 12009]
 gi|192927791|gb|EDV82405.1| flagellar hook-associated protein FlgK [Escherichia coli E22]
 gi|194413464|gb|EDX29746.1| flagellar hook-associated protein FlgK [Escherichia coli B171]
 gi|257758469|dbj|BAI29966.1| flagellar hook-filament junction protein FlgK [Escherichia coli
           O103:H2 str. 12009]
          Length = 547

 Score = 36.0 bits (81), Expect = 1.6,   Method: Composition-based stats.
 Identities = 15/110 (13%), Positives = 35/110 (31%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           + +  + A SGL    A +   S NI++    G T  +    +   +         GV V
Sbjct: 1   MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGGWVGNGVYV 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
             +  +   F+          ++    +Y  ++ +        ++     
Sbjct: 61  SGVQREYDAFITNQLRAAQTQSSGLTARYEQMSKIDNMLSTSTSSLATQM 110


>gi|15611401|ref|NP_223052.1| flagellar basal-body rod protein [Helicobacter pylori J99]
 gi|4154843|gb|AAD05896.1| FLAGELLAR BASAL-BODY ROD PROTEIN [Helicobacter pylori J99]
          Length = 269

 Score = 36.0 bits (81), Expect = 1.6,   Method: Composition-based stats.
 Identities = 11/60 (18%), Positives = 21/60 (35%), Gaps = 1/60 (1%)

Query: 72  TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ-SHDMMTTTLD 130
                       A    +++  NVN + E + + E NR      + +K    DM    ++
Sbjct: 204 QGEGVHQVSDSGALRQSMLEKSNVNAVREMSTLIEINRFLDMYSKVLKTHQDDMNAEAIN 263


>gi|326202856|ref|ZP_08192723.1| flagellar hook-associated protein FlgK [Clostridium papyrosolvens
           DSM 2782]
 gi|325986933|gb|EGD47762.1| flagellar hook-associated protein FlgK [Clostridium papyrosolvens
           DSM 2782]
          Length = 707

 Score = 36.0 bits (81), Expect = 1.7,   Method: Composition-based stats.
 Identities = 8/38 (21%), Positives = 17/38 (44%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             V++  E ++M +    Y A+ + +     MM T + 
Sbjct: 663 SGVSMDEEMSNMMKYKFAYDASSRVLNVMDSMMETIIT 700


>gi|191168469|ref|ZP_03030257.1| flagellar hook-associated protein FlgK [Escherichia coli B7A]
 gi|190901488|gb|EDV61249.1| flagellar hook-associated protein FlgK [Escherichia coli B7A]
          Length = 547

 Score = 36.0 bits (81), Expect = 1.7,   Method: Composition-based stats.
 Identities = 16/110 (14%), Positives = 36/110 (32%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           + +  + A SGL    A +   S NI++    G T  +    +   +         GV V
Sbjct: 1   MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGGWVGNGVYV 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
             +  +   F+          ++  I +Y  ++ +        ++     
Sbjct: 61  SGVQREYDAFITNQLRAAQTQSSGLIARYEQMSKIDNMLSTSTSSLATQM 110


>gi|323175237|gb|EFZ60850.1| flagellar hook-associated protein FlgK [Escherichia coli LT-68]
          Length = 547

 Score = 36.0 bits (81), Expect = 1.7,   Method: Composition-based stats.
 Identities = 15/110 (13%), Positives = 35/110 (31%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           + +  + A SGL    A +   S NI++    G T  +    +   +         GV V
Sbjct: 1   MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGGWVGNGVYV 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
             +  +   F+          ++    +Y  ++ +        ++     
Sbjct: 61  SGVQREYDAFITNQLRAAQTQSSGLTARYEQMSKIDNMLSTSTSSLATQM 110


>gi|315296713|gb|EFU56008.1| flagellar hook-associated protein FlgK [Escherichia coli MS 16-3]
          Length = 547

 Score = 36.0 bits (81), Expect = 1.7,   Method: Composition-based stats.
 Identities = 15/110 (13%), Positives = 35/110 (31%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           + +  + A SGL    A +   S NI++    G T  +    +   +         GV V
Sbjct: 1   MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGGWVGNGVYV 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
             +  +   F+          ++    +Y  ++ +        ++     
Sbjct: 61  SGVQREYDAFITNQLRAAQTQSSGLTARYEQMSKIDNMLSTSTSSLATQM 110


>gi|331682584|ref|ZP_08383203.1| flagellar hook-associated protein FlgK [Escherichia coli H299]
 gi|331080215|gb|EGI51394.1| flagellar hook-associated protein FlgK [Escherichia coli H299]
          Length = 547

 Score = 36.0 bits (81), Expect = 1.7,   Method: Composition-based stats.
 Identities = 15/110 (13%), Positives = 35/110 (31%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           + +  + A SGL    A +   S NI++    G T  +    +   +         GV V
Sbjct: 1   MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGGWVGNGVYV 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
             +  +   F+          ++    +Y  ++ +        ++     
Sbjct: 61  SGVQREYDAFITNQLRAAQTQSSGLTARYEQMSKIDNMLSTSTSSLATQM 110


>gi|300922608|ref|ZP_07138708.1| flagellar hook-associated protein FlgK [Escherichia coli MS 182-1]
 gi|301328548|ref|ZP_07221609.1| flagellar hook-associated protein FlgK [Escherichia coli MS 78-1]
 gi|300421085|gb|EFK04396.1| flagellar hook-associated protein FlgK [Escherichia coli MS 182-1]
 gi|300844940|gb|EFK72700.1| flagellar hook-associated protein FlgK [Escherichia coli MS 78-1]
          Length = 547

 Score = 36.0 bits (81), Expect = 1.7,   Method: Composition-based stats.
 Identities = 15/110 (13%), Positives = 35/110 (31%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           + +  + A SGL    A +   S NI++    G T  +    +   +         GV V
Sbjct: 1   MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGGWVGNGVNV 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
             +  +   F+          ++    +Y  ++ +        ++     
Sbjct: 61  SGVQREYDAFITNQLRAAQTQSSGLTARYEQMSKIDNMLSTSTSSLATQM 110


>gi|215486291|ref|YP_002328722.1| flagellar hook-associated protein FlgK [Escherichia coli O127:H6
           str. E2348/69]
 gi|312968844|ref|ZP_07783051.1| flagellar hook-associated protein FlgK [Escherichia coli 2362-75]
 gi|215264363|emb|CAS08720.1| flagellar hook-filament junction protein 1 [Escherichia coli
           O127:H6 str. E2348/69]
 gi|312286246|gb|EFR14159.1| flagellar hook-associated protein FlgK [Escherichia coli 2362-75]
          Length = 547

 Score = 36.0 bits (81), Expect = 1.7,   Method: Composition-based stats.
 Identities = 15/110 (13%), Positives = 35/110 (31%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           + +  + A SGL    A +   S NI++    G T  +    +   +         GV V
Sbjct: 1   MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGGWVGNGVYV 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
             +  +   F+          ++    +Y  ++ +        ++     
Sbjct: 61  SGVQREYDAFITNQLRAAQTQSSGLTARYEQMSKIDNMLSTSTSSLATQM 110


>gi|189426356|ref|YP_001953533.1| flagellar basal-body rod protein FlgB [Geobacter lovleyi SZ]
 gi|189422615|gb|ACD97013.1| flagellar basal-body rod protein FlgB [Geobacter lovleyi SZ]
          Length = 146

 Score = 36.0 bits (81), Expect = 1.7,   Method: Composition-based stats.
 Identities = 23/140 (16%), Positives = 52/140 (37%), Gaps = 10/140 (7%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGS-DPYRRKTISFEEVMHGSGGVR 62
              +  +    + +++    +IS NIANA T G TP S +  ++   + ++     G  +
Sbjct: 7   FNTTIDVLGKSIDLRTRNQNLISSNIANAETPGYTPKSLEFEQQLQSAVKKSTTRRGDSQ 66

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYP---------NVNVLVETADMRETNRLYMA 113
                   +                 +V+ P         +V +  E + M +   L+ A
Sbjct: 67  FSGATTHPAHIPLRGGGERISQVRGTVVETPAKTPGRDGNSVEMENEMSRMMQNQVLFNA 126

Query: 114 NLQTIKQSHDMMTTTLDLLR 133
           ++Q + +  + + T L   +
Sbjct: 127 SVQLLSKKFEGLRTALREGK 146


>gi|82544453|ref|YP_408400.1| flagellar hook-associated protein FlgK [Shigella boydii Sb227]
 gi|81245864|gb|ABB66572.1| hook-filament junction protein 1 [Shigella boydii Sb227]
 gi|320173535|gb|EFW48731.1| Flagellar hook-associated protein FlgK [Shigella dysenteriae CDC
           74-1112]
 gi|332094064|gb|EGI99116.1| flagellar hook-associated protein FlgK [Shigella boydii 3594-74]
          Length = 547

 Score = 36.0 bits (81), Expect = 1.7,   Method: Composition-based stats.
 Identities = 15/110 (13%), Positives = 35/110 (31%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           + +  + A SGL    A +   S NI++    G T  +    +   +         GV V
Sbjct: 1   MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGGWVGNGVYV 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
             +  +   F+          ++    +Y  ++ +        ++     
Sbjct: 61  SGVQREYDAFITNQLRAAQTQSSGLTARYEQMSKIDNMLSTSTSSLATQM 110


>gi|194438121|ref|ZP_03070214.1| flagellar hook-associated protein FlgK [Escherichia coli 101-1]
 gi|253773894|ref|YP_003036725.1| flagellar hook-associated protein FlgK [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254161188|ref|YP_003044296.1| flagellar hook-associated protein FlgK [Escherichia coli B str.
           REL606]
 gi|300928366|ref|ZP_07143900.1| flagellar hook-associated protein FlgK [Escherichia coli MS 187-1]
 gi|194423057|gb|EDX39051.1| flagellar hook-associated protein FlgK [Escherichia coli 101-1]
 gi|242376886|emb|CAQ31603.1| flagellar biosynthesis, hook-filament junction protein 1, subunit
           of Flagellum [Escherichia coli BL21(DE3)]
 gi|253324938|gb|ACT29540.1| flagellar hook-associated protein FlgK [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253973089|gb|ACT38760.1| flagellar hook-associated protein K [Escherichia coli B str.
           REL606]
 gi|253977303|gb|ACT42973.1| flagellar hook-associated protein K [Escherichia coli BL21(DE3)]
 gi|300463624|gb|EFK27117.1| flagellar hook-associated protein FlgK [Escherichia coli MS 187-1]
 gi|323962681|gb|EGB58259.1| flagellar hook protein FlgK [Escherichia coli H489]
 gi|323973329|gb|EGB68518.1| flagellar hook protein FlgK [Escherichia coli TA007]
 gi|332342628|gb|AEE55962.1| flagellar hook-associated protein FlgK [Escherichia coli UMNK88]
          Length = 547

 Score = 36.0 bits (81), Expect = 1.7,   Method: Composition-based stats.
 Identities = 15/110 (13%), Positives = 35/110 (31%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           + +  + A SGL    A +   S NI++    G T  +    +   +         GV V
Sbjct: 1   MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGGWVGNGVYV 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
             +  +   F+          ++    +Y  ++ +        ++     
Sbjct: 61  SGVQREYDAFITNQLRAAQTQSSGLTARYEQMSKIDNMLSTSTSSLATQM 110


>gi|157159090|ref|YP_001462316.1| flagellar hook-associated protein FlgK [Escherichia coli E24377A]
 gi|209918336|ref|YP_002292420.1| flagellar hook-associated protein FlgK [Escherichia coli SE11]
 gi|218553660|ref|YP_002386573.1| flagellar hook-associated protein FlgK [Escherichia coli IAI1]
 gi|300821137|ref|ZP_07101286.1| flagellar hook-associated protein FlgK [Escherichia coli MS 119-7]
 gi|331676873|ref|ZP_08377569.1| flagellar hook-associated protein FlgK [Escherichia coli H591]
 gi|157081120|gb|ABV20828.1| flagellar hook-associated protein FlgK [Escherichia coli E24377A]
 gi|209911595|dbj|BAG76669.1| flagellar hook-filament junction protein 1 FlgK [Escherichia coli
           SE11]
 gi|218360428|emb|CAQ97982.1| flagellar hook-filament junction protein 1 [Escherichia coli IAI1]
 gi|300526436|gb|EFK47505.1| flagellar hook-associated protein FlgK [Escherichia coli MS 119-7]
 gi|323947616|gb|EGB43620.1| flagellar hook-associated protein FlgK [Escherichia coli H120]
 gi|324017414|gb|EGB86633.1| flagellar hook-associated protein FlgK [Escherichia coli MS 117-3]
 gi|331075562|gb|EGI46860.1| flagellar hook-associated protein FlgK [Escherichia coli H591]
          Length = 547

 Score = 36.0 bits (81), Expect = 1.7,   Method: Composition-based stats.
 Identities = 15/110 (13%), Positives = 35/110 (31%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           + +  + A SGL    A +   S NI++    G T  +    +   +         GV V
Sbjct: 1   MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGGWVGNGVYV 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
             +  +   F+          ++    +Y  ++ +        ++     
Sbjct: 61  SGVQREYDAFITNQLRAAQTQSSGLTARYEQMSKIDNMLSTSTSSLATQM 110


>gi|309701354|emb|CBJ00655.1| flagellar hook-associated protein 1 [Escherichia coli ETEC H10407]
          Length = 547

 Score = 36.0 bits (81), Expect = 1.7,   Method: Composition-based stats.
 Identities = 15/110 (13%), Positives = 35/110 (31%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           + +  + A SGL    A +   S NI++    G T  +    +   +         GV V
Sbjct: 1   MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGGWVGNGVYV 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
             +  +   F+          ++    +Y  ++ +        ++     
Sbjct: 61  SGVQREYDAFITNQLRAAQTQSSGLTARYEQMSKIDNMLSTSTSSLATQM 110


>gi|304558598|gb|ADM41262.1| Flagellar hook-associated protein FlgK [Edwardsiella tarda FL6-60]
          Length = 546

 Score = 36.0 bits (81), Expect = 1.7,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 19/39 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN+  E  D+    + YMAN Q I+ +  M    LD+
Sbjct: 507 SGVNLDEEYGDLVRFQQYYMANAQVIQTATSMFNALLDI 545



 Score = 33.7 bits (75), Expect = 9.3,   Method: Composition-based stats.
 Identities = 17/99 (17%), Positives = 33/99 (33%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +    + A SGL+     + + S NI N  T G    S  +     +         GV V
Sbjct: 1   MANLINNAMSGLSAAQTALAVTSNNINNVYTAGYNRQSVSFAENNGTSTPAGFIGNGVVV 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETA 102
             I  + + F+           A+    +  ++ + +  
Sbjct: 61  SGINREYNQFIVNQLRQGQSEFATTSTYHKQISQIDDLL 99


>gi|331646340|ref|ZP_08347443.1| flagellar hook-associated protein FlgK [Escherichia coli M605]
 gi|281178191|dbj|BAI54521.1| flagellar hook-filament junction protein 1 FlgK [Escherichia coli
           SE15]
 gi|330910896|gb|EGH39406.1| flagellar hook-associated protein FlgK [Escherichia coli AA86]
 gi|331045092|gb|EGI17219.1| flagellar hook-associated protein FlgK [Escherichia coli M605]
          Length = 547

 Score = 36.0 bits (81), Expect = 1.7,   Method: Composition-based stats.
 Identities = 15/110 (13%), Positives = 35/110 (31%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           + +  + A SGL    A +   S NI++    G T  +    +   +         GV V
Sbjct: 1   MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGGWVGNGVYV 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
             +  +   F+          ++    +Y  ++ +        ++     
Sbjct: 61  SGVQREYDAFITNQLRAAQTQSSGLTARYEQMSKIDNMLSTSTSSLATQM 110


>gi|238755319|ref|ZP_04616662.1| hypothetical protein yruck0001_10770 [Yersinia ruckeri ATCC 29473]
 gi|238706455|gb|EEP98829.1| hypothetical protein yruck0001_10770 [Yersinia ruckeri ATCC 29473]
          Length = 547

 Score = 36.0 bits (81), Expect = 1.7,   Method: Composition-based stats.
 Identities = 16/101 (15%), Positives = 34/101 (33%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
              + A SGL+     +  +  NI+N + TG    +  + +             GV +  
Sbjct: 4   NLINTAMSGLSAAQYALSTVGNNISNFQVTGYNRQNAIFAQNGGILSPAGFIGNGVTITG 63

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRE 106
           I  + ++F+          +A     Y  V+ +      + 
Sbjct: 64  INREYNSFISNQLRSAQTESAGLTTYYNQVSQIDNLLANKS 104


>gi|229155309|ref|ZP_04283420.1| Flagellar hook-associated protein FlgK [Bacillus cereus ATCC 4342]
 gi|228628234|gb|EEK84950.1| Flagellar hook-associated protein FlgK [Bacillus cereus ATCC 4342]
          Length = 432

 Score = 36.0 bits (81), Expect = 1.7,   Method: Composition-based stats.
 Identities = 7/40 (17%), Positives = 20/40 (50%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            VN+  E  ++    + ++AN + I   +++  +   ++R
Sbjct: 393 GVNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSLFSIIR 432



 Score = 34.1 bits (76), Expect = 7.3,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 30/91 (32%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
          +   SGL      +Q   +N++N  T G       Y     S         G  V+ +GV
Sbjct: 7  NTPLSGLLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGSAGASQGYSPEQKIGYGVQTLGV 66

Query: 69 DQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
          D+ T   +    +   +      Y N  +  
Sbjct: 67 DRITDEVKTKQFNDQLSQLSYYNYMNSTLSR 97


>gi|222032835|emb|CAP75574.1| flagellar hook-associated protein 1 [Escherichia coli LF82]
 gi|312945644|gb|ADR26471.1| flagellar hook-associated protein FlgK [Escherichia coli O83:H1
           str. NRG 857C]
          Length = 547

 Score = 36.0 bits (81), Expect = 1.7,   Method: Composition-based stats.
 Identities = 15/110 (13%), Positives = 35/110 (31%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           + +  + A SGL    A +   S NI++    G T  +    +   +         GV V
Sbjct: 1   MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGGWVGNGVYV 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
             +  +   F+          ++    +Y  ++ +        ++     
Sbjct: 61  SGVQREYDAFITNQLRAAQTQSSGLTARYEQMSKIDNMLSTSTSSLATQM 110


>gi|213616339|ref|ZP_03372165.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
          serovar Typhi str. E98-2068]
          Length = 187

 Score = 36.0 bits (81), Expect = 1.7,   Method: Composition-based stats.
 Identities = 18/63 (28%), Positives = 25/63 (39%), Gaps = 4/63 (6%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          S   A SGL   +  + +I  NIAN+ T G   G+  +               GV+V  I
Sbjct: 2  SFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFA----DMFAGSKVGLGVKVAGI 57

Query: 67 GVD 69
            D
Sbjct: 58 TQD 60


>gi|26247222|ref|NP_753262.1| flagellar hook-associated protein FlgK [Escherichia coli CFT073]
 gi|227886560|ref|ZP_04004365.1| flagellar hook-associated protein FlgK [Escherichia coli 83972]
 gi|300974386|ref|ZP_07172598.1| flagellar hook-associated protein FlgK [Escherichia coli MS 45-1]
 gi|26107623|gb|AAN79822.1|AE016759_96 Flagellar hook-associated protein 1 [Escherichia coli CFT073]
 gi|227836764|gb|EEJ47230.1| flagellar hook-associated protein FlgK [Escherichia coli 83972]
 gi|300410629|gb|EFJ94167.1| flagellar hook-associated protein FlgK [Escherichia coli MS 45-1]
 gi|307553084|gb|ADN45859.1| flagellar hook-associated protein FlgK [Escherichia coli ABU 83972]
 gi|315291060|gb|EFU50423.1| flagellar hook-associated protein FlgK [Escherichia coli MS 153-1]
          Length = 547

 Score = 36.0 bits (81), Expect = 1.7,   Method: Composition-based stats.
 Identities = 15/110 (13%), Positives = 35/110 (31%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           + +  + A SGL    A +   S NI++    G T  +    +   +         GV V
Sbjct: 1   MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGGWVGNGVYV 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
             +  +   F+          ++    +Y  ++ +        ++     
Sbjct: 61  SGVQREYDAFITNQLRAAQTQSSGLTARYEQMSKIDNMLSTSTSSLATQM 110


>gi|238785500|ref|ZP_04629483.1| Flagellar basal-body rod protein flgB [Yersinia bercovieri ATCC
           43970]
 gi|238713602|gb|EEQ05631.1| Flagellar basal-body rod protein flgB [Yersinia bercovieri ATCC
           43970]
          Length = 137

 Score = 36.0 bits (81), Expect = 1.7,   Method: Composition-based stats.
 Identities = 25/132 (18%), Positives = 43/132 (32%), Gaps = 5/132 (3%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-G 60
           D L  +       L +++ R +I+S NIANA T G       +  +     E    SG G
Sbjct: 3   DKLDGALRFQQEALNLRAQRQEILSSNIANADTPGFQARDIDFSSQLKKVVEQGRVSGTG 62

Query: 61  VRVKKIGVDQSTFVEEFDPG---HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           V +               P             +    V++  E  +  + +  Y  +L  
Sbjct: 63  VSLSLTSARHIPASTVQPPDLDLLFRVPDQPSMDGNTVDMDRERTNFADNSLKYQTDLTV 122

Query: 118 IKQS-HDMMTTT 128
           I      M++  
Sbjct: 123 ISSQIKGMLSVL 134


>gi|317012196|gb|ADU82804.1| flagellar basal-body rod protein [Helicobacter pylori Lithuania75]
          Length = 269

 Score = 36.0 bits (81), Expect = 1.7,   Method: Composition-based stats.
 Identities = 11/60 (18%), Positives = 22/60 (36%), Gaps = 1/60 (1%)

Query: 72  TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ-SHDMMTTTLD 130
                    +  A    +++  NVN + E + + E NR      + +K    DM    ++
Sbjct: 204 QGEGVHQVSNSGALKQYMLEKSNVNAVREMSALIEINRFLDMYSKVLKTHQDDMNAEAIN 263


>gi|238758113|ref|ZP_04619293.1| Flagellar basal-body rod protein flgB [Yersinia aldovae ATCC 35236]
 gi|238703651|gb|EEP96188.1| Flagellar basal-body rod protein flgB [Yersinia aldovae ATCC 35236]
          Length = 137

 Score = 36.0 bits (81), Expect = 1.7,   Method: Composition-based stats.
 Identities = 25/132 (18%), Positives = 44/132 (33%), Gaps = 5/132 (3%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-G 60
           D L  +       L ++S R +++S NIANA T G       +  +     E    +G G
Sbjct: 3   DKLDGALRFQQEALNLRSQRQEVLSSNIANADTPGFQARDIDFSSQLKKVMEQGRVNGTG 62

Query: 61  VRVKKIGVDQSTFVEEFDPG---HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           V +               P             +    V++  E  +  + +  Y  +L  
Sbjct: 63  VSLSLTSARHIPASTVQPPDLDLLFRVPDQPAMDGNTVDMDRERTNFADNSLKYQTSLTV 122

Query: 118 I-KQSHDMMTTT 128
           +  Q   MM+  
Sbjct: 123 LGSQIKGMMSVL 134


>gi|323163692|gb|EFZ49513.1| flagellar hook-associated protein FlgK [Escherichia coli E128010]
          Length = 547

 Score = 36.0 bits (81), Expect = 1.7,   Method: Composition-based stats.
 Identities = 15/110 (13%), Positives = 35/110 (31%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           + +  + A SGL    A +   S NI++    G T  +    +   +         GV V
Sbjct: 1   MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGGWVGNGVYV 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
             +  +   F+          ++    +Y  ++ +        ++     
Sbjct: 61  SGVQREYDAFITNQLRAAQTQSSGLTARYEQMSKIDNMLSTSTSSLATQM 110


>gi|300902473|ref|ZP_07120455.1| flagellar hook-associated protein FlgK [Escherichia coli MS 84-1]
 gi|301304979|ref|ZP_07211081.1| flagellar hook-associated protein FlgK [Escherichia coli MS 124-1]
 gi|300405505|gb|EFJ89043.1| flagellar hook-associated protein FlgK [Escherichia coli MS 84-1]
 gi|300839697|gb|EFK67457.1| flagellar hook-associated protein FlgK [Escherichia coli MS 124-1]
 gi|315253883|gb|EFU33851.1| flagellar hook-associated protein FlgK [Escherichia coli MS 85-1]
          Length = 547

 Score = 36.0 bits (81), Expect = 1.7,   Method: Composition-based stats.
 Identities = 15/110 (13%), Positives = 35/110 (31%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           + +  + A SGL    A +   S NI++    G T  +    +   +         GV V
Sbjct: 1   MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGGWVGNGVYV 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
             +  +   F+          ++    +Y  ++ +        ++     
Sbjct: 61  SGVQREYDAFITNQLRAAQTQSSGLTARYEQMSKIDNMLSTSTSSLATQM 110


>gi|256018661|ref|ZP_05432526.1| flagellar hook-associated protein FlgK [Shigella sp. D9]
 gi|332279730|ref|ZP_08392143.1| flagellar hook-filament junction protein 1 [Shigella sp. D9]
 gi|323185795|gb|EFZ71156.1| flagellar hook-associated protein FlgK [Escherichia coli 1357]
 gi|324117347|gb|EGC11254.1| flagellar hook protein FlgK [Escherichia coli E1167]
 gi|332102082|gb|EGJ05428.1| flagellar hook-filament junction protein 1 [Shigella sp. D9]
          Length = 547

 Score = 36.0 bits (81), Expect = 1.7,   Method: Composition-based stats.
 Identities = 15/110 (13%), Positives = 35/110 (31%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           + +  + A SGL    A +   S NI++    G T  +    +   +         GV V
Sbjct: 1   MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGGWVGNGVYV 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
             +  +   F+          ++    +Y  ++ +        ++     
Sbjct: 61  SGVQREYDAFITNQLRAAQTQSSGLTARYEQMSKIDNMLSTSTSSLATQM 110


>gi|170683657|ref|YP_001744098.1| flagellar hook-associated protein FlgK [Escherichia coli SMS-3-5]
 gi|170521375|gb|ACB19553.1| flagellar hook-associated protein FlgK [Escherichia coli SMS-3-5]
          Length = 547

 Score = 36.0 bits (81), Expect = 1.7,   Method: Composition-based stats.
 Identities = 15/110 (13%), Positives = 35/110 (31%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           + +  + A SGL    A +   S NI++    G T  +    +   +         GV V
Sbjct: 1   MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGGWVGNGVYV 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
             +  +   F+          ++    +Y  ++ +        ++     
Sbjct: 61  SGVQREYDAFITNQLRAAQTQSSGLTARYEQMSKIDNMLSTSTSSLATQM 110


>gi|149203101|ref|ZP_01880072.1| flagellar hook-associated protein K [Roseovarius sp. TM1035]
 gi|149143647|gb|EDM31683.1| flagellar hook-associated protein K [Roseovarius sp. TM1035]
          Length = 482

 Score = 36.0 bits (81), Expect = 1.7,   Method: Composition-based stats.
 Identities = 22/101 (21%), Positives = 34/101 (33%), Gaps = 8/101 (7%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             L ++   A SGLA  +  + +IS N+ANA T G  P                    GV
Sbjct: 1   MSLGSALSSALSGLAANTRAVDVISGNLANALTEGFAP--------REVTLAATRDGRGV 52

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETA 102
           +V  I       +         A A+  V+      +  + 
Sbjct: 53  QVTGIVRQVDLGLLSDRRLADSARAASEVQAAFARAVESSV 93


>gi|126730122|ref|ZP_01745934.1| flagellar hook-associated protein K [Sagittula stellata E-37]
 gi|126709502|gb|EBA08556.1| flagellar hook-associated protein K [Sagittula stellata E-37]
          Length = 482

 Score = 36.0 bits (81), Expect = 1.7,   Method: Composition-based stats.
 Identities = 15/103 (14%), Positives = 27/103 (26%), Gaps = 3/103 (2%)

Query: 29  IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASG 88
           IA+A    + PGS             +           G    +                
Sbjct: 383 IADALGASNVPGSA---SLPSIARTFIDQVSQFSSSVAGERVRSENAFTFLSAQNRALRE 439

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +     V+   E   + +  + Y AN + I    D+    L +
Sbjct: 440 MELTKGVDTDQELQKLMQVEQYYTANAKVISTVDDLFERLLSI 482



 Score = 34.1 bits (76), Expect = 6.4,   Method: Composition-based stats.
 Identities = 21/120 (17%), Positives = 34/120 (28%), Gaps = 6/120 (5%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             L  + + A SGL   +    +IS NI+NA            RR            GGV
Sbjct: 1   MSLTGALNAAVSGLKANTRAASLISTNISNATNEA------YGRRTLELNALGSGTRGGV 54

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
            V  +       +           A G   Y     +        T+    + +   + +
Sbjct: 55  LVAGVVRQYDPVLMADRMASDSQLAGGNDMYAFAKRMETLVGESGTSGSLTSRITAFENA 114


>gi|16129045|ref|NP_415600.1| flagellar hook-filament junction protein 1 [Escherichia coli str.
           K-12 substr. MG1655]
 gi|89107928|ref|AP_001708.1| flagellar hook-filament junction protein 1 [Escherichia coli str.
           K-12 substr. W3110]
 gi|170080733|ref|YP_001730053.1| flagellar hook-filament junction protein 1 [Escherichia coli str.
           K-12 substr. DH10B]
 gi|238900336|ref|YP_002926132.1| flagellar hook-filament junction protein 1 [Escherichia coli
           BW2952]
 gi|256023220|ref|ZP_05437085.1| flagellar hook-associated protein FlgK [Escherichia sp. 4_1_40B]
 gi|307137717|ref|ZP_07497073.1| flagellar hook-associated protein FlgK [Escherichia coli H736]
 gi|331641626|ref|ZP_08342761.1| flagellar hook-associated protein FlgK [Escherichia coli H736]
 gi|2506419|sp|P33235|FLGK_ECOLI RecName: Full=Flagellar hook-associated protein 1; Short=HAP1
 gi|1651528|dbj|BAA35891.1| flagellar hook-filament junction protein 1 [Escherichia coli str.
           K12 substr. W3110]
 gi|1787323|gb|AAC74166.1| flagellar hook-filament junction protein 1 [Escherichia coli str.
           K-12 substr. MG1655]
 gi|169888568|gb|ACB02275.1| flagellar hook-filament junction protein 1 [Escherichia coli str.
           K-12 substr. DH10B]
 gi|238861110|gb|ACR63108.1| flagellar hook-filament junction protein 1 [Escherichia coli
           BW2952]
 gi|260449778|gb|ACX40200.1| flagellar hook-associated protein FlgK [Escherichia coli DH1]
 gi|315135714|dbj|BAJ42873.1| flagellar hook-associated protein FlgK [Escherichia coli DH1]
 gi|323937822|gb|EGB34086.1| flagellar hook-associated protein FlgK [Escherichia coli E1520]
 gi|331038424|gb|EGI10644.1| flagellar hook-associated protein FlgK [Escherichia coli H736]
          Length = 547

 Score = 36.0 bits (81), Expect = 1.7,   Method: Composition-based stats.
 Identities = 15/110 (13%), Positives = 35/110 (31%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           + +  + A SGL    A +   S NI++    G T  +    +   +         GV V
Sbjct: 1   MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGGWVGNGVYV 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
             +  +   F+          ++    +Y  ++ +        ++     
Sbjct: 61  SGVQREYDAFITNQLRAAQTQSSGLTARYEQMSKIDNMLSTSTSSLATQM 110


>gi|149188072|ref|ZP_01866367.1| flagellar hook-associated protein K [Vibrio shilonii AK1]
 gi|148838060|gb|EDL55002.1| flagellar hook-associated protein K [Vibrio shilonii AK1]
          Length = 622

 Score = 36.0 bits (81), Expect = 1.7,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 22/39 (56%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN+  E A+M +  + YMA+ + ++ +++   T L L
Sbjct: 583 SGVNLDEEAANMMKFQQAYMASSRVMQAANETFDTILQL 621


>gi|320186970|gb|EFW61683.1| Flagellar hook-associated protein FlgK [Shigella flexneri CDC
           796-83]
          Length = 547

 Score = 36.0 bits (81), Expect = 1.7,   Method: Composition-based stats.
 Identities = 15/110 (13%), Positives = 35/110 (31%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           + +  + A SGL    A +   S NI++    G T  +    +   +         GV V
Sbjct: 1   MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGGWVGNGVYV 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
             +  +   F+          ++    +Y  ++ +        ++     
Sbjct: 61  SGVQREYDAFITNQLRAAQTQSSGLTARYEQMSKIDNMLSTSTSSLATQM 110


>gi|331657144|ref|ZP_08358106.1| flagellar hook-associated protein FlgK [Escherichia coli TA206]
 gi|324007922|gb|EGB77141.1| flagellar hook-associated protein FlgK [Escherichia coli MS 57-2]
 gi|331055392|gb|EGI27401.1| flagellar hook-associated protein FlgK [Escherichia coli TA206]
          Length = 547

 Score = 36.0 bits (81), Expect = 1.7,   Method: Composition-based stats.
 Identities = 15/110 (13%), Positives = 35/110 (31%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           + +  + A SGL    A +   S NI++    G T  +    +   +         GV V
Sbjct: 1   MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGGWVGNGVYV 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
             +  +   F+          ++    +Y  ++ +        ++     
Sbjct: 61  SGVQREYDAFITNQLRAAQTQSSGLTARYEQMSKIDNMLSTSTSSLATQM 110


>gi|293409448|ref|ZP_06653024.1| flagellar hook-associated protein FlgK [Escherichia coli B354]
 gi|331662488|ref|ZP_08363411.1| flagellar hook-associated protein FlgK [Escherichia coli TA143]
 gi|331672601|ref|ZP_08373390.1| flagellar hook-associated protein FlgK [Escherichia coli TA280]
 gi|291469916|gb|EFF12400.1| flagellar hook-associated protein FlgK [Escherichia coli B354]
 gi|331060910|gb|EGI32874.1| flagellar hook-associated protein FlgK [Escherichia coli TA143]
 gi|331070244|gb|EGI41610.1| flagellar hook-associated protein FlgK [Escherichia coli TA280]
          Length = 547

 Score = 36.0 bits (81), Expect = 1.7,   Method: Composition-based stats.
 Identities = 15/110 (13%), Positives = 35/110 (31%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           + +  + A SGL    A +   S NI++    G T  +    +   +         GV V
Sbjct: 1   MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGGWVGNGVYV 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
             +  +   F+          ++    +Y  ++ +        ++     
Sbjct: 61  SGVQREYDAFITNQLRAAQTQSSGLTARYEQMSKIDNMLSTSTSSLATQM 110


>gi|317052131|ref|YP_004113247.1| flagellar hook-associated protein FlgK [Desulfurispirillum indicum
           S5]
 gi|316947215|gb|ADU66691.1| flagellar hook-associated protein FlgK [Desulfurispirillum indicum
           S5]
          Length = 569

 Score = 36.0 bits (81), Expect = 1.7,   Method: Composition-based stats.
 Identities = 7/38 (18%), Positives = 16/38 (42%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             VN   E  +M +  R + A+ + I     ++   ++
Sbjct: 528 SGVNENEELTNMLKFQRSFEASSRFITTIDRLLDNIVN 565



 Score = 34.1 bits (76), Expect = 7.1,   Method: Composition-based stats.
 Identities = 10/72 (13%), Positives = 27/72 (37%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
            S ++  SG+    + +  +  N++N  T G +      +         +    GV + 
Sbjct: 4  FQSLNVGLSGVLASQSALMTVGHNLSNMNTEGFSRQRVVLQANQPLRIANLQYGQGVNLN 63

Query: 65 KIGVDQSTFVEE 76
          ++      +V++
Sbjct: 64 QVQRVHDEYVQQ 75


>gi|218700416|ref|YP_002408045.1| flagellar hook-associated protein FlgK [Escherichia coli IAI39]
 gi|218370402|emb|CAR18207.1| flagellar hook-filament junction protein 1 [Escherichia coli IAI39]
          Length = 547

 Score = 36.0 bits (81), Expect = 1.7,   Method: Composition-based stats.
 Identities = 15/110 (13%), Positives = 35/110 (31%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           + +  + A SGL    A +   S NI++    G T  +    +   +         GV V
Sbjct: 1   MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGGWVGNGVYV 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
             +  +   F+          ++    +Y  ++ +        ++     
Sbjct: 61  SGVQREYDAFITNQLRAAQTQSSGLTARYEQMSKIDNMLSTSTSSLATQM 110


>gi|194015655|ref|ZP_03054271.1| flagellar hook-associated protein FlgK [Bacillus pumilus ATCC 7061]
 gi|194013059|gb|EDW22625.1| flagellar hook-associated protein FlgK [Bacillus pumilus ATCC 7061]
          Length = 506

 Score = 36.0 bits (81), Expect = 1.7,   Method: Composition-based stats.
 Identities = 5/38 (13%), Positives = 16/38 (42%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             V++  E  +M +    Y A  + +    +++   ++
Sbjct: 462 SAVSIDEEMTNMIQFQHAYNAAARVVTLQDEILDKVIN 499



 Score = 34.1 bits (76), Expect = 6.8,   Method: Composition-based stats.
 Identities = 14/94 (14%), Positives = 29/94 (30%), Gaps = 2/94 (2%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRR--KTISFEEVMHGS 58
          M         A  G+  Q A + + S N++NA T G +     ++              +
Sbjct: 1  MGSTFMGLETAKRGITAQRAGLYVTSNNVSNANTDGYSRQRVTFKADNPYPVISVYDGKT 60

Query: 59 GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKY 92
           G     + V     + +        + +  + Y
Sbjct: 61 YGQMGTGVQVGTVERIRDSFLDLQFRDHNNNLSY 94


>gi|187925760|ref|YP_001897402.1| flagellar basal body rod protein FlgF [Burkholderia phytofirmans
           PsJN]
 gi|187716954|gb|ACD18178.1| flagellar basal-body rod protein FlgF [Burkholderia phytofirmans
           PsJN]
          Length = 252

 Score = 36.0 bits (81), Expect = 1.7,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 16/43 (37%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           ++  NVN +     M    R +    + ++ +     +   LL
Sbjct: 207 LEGSNVNPVSAMVSMITNARQFQMQTKLLESADKNDQSANQLL 249


>gi|95929873|ref|ZP_01312614.1| flagellar basal body rod protein [Desulfuromonas acetoxidans DSM
           684]
 gi|95134169|gb|EAT15827.1| flagellar basal body rod protein [Desulfuromonas acetoxidans DSM
           684]
          Length = 242

 Score = 36.0 bits (81), Expect = 1.7,   Method: Composition-based stats.
 Identities = 8/51 (15%), Positives = 19/51 (37%)

Query: 82  PVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
                 G ++  NV  + ET  M  + R +    + +K    + +   ++ 
Sbjct: 190 DSQVMQGHLEQSNVKAIEETTLMMTSLRAFENYQKAMKNYFTLESKVNEIG 240


>gi|323967023|gb|EGB62449.1| flagellar hook protein FlgK [Escherichia coli M863]
 gi|327253481|gb|EGE65119.1| flagellar hook-associated protein FlgK [Escherichia coli STEC_7v]
          Length = 547

 Score = 36.0 bits (81), Expect = 1.8,   Method: Composition-based stats.
 Identities = 15/110 (13%), Positives = 35/110 (31%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           + +  + A SGL    A +   S NI++    G T  +    +   +         GV V
Sbjct: 1   MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGGWVGNGVYV 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
             +  +   F+          ++    +Y  ++ +        ++     
Sbjct: 61  SGVQREYDAFITNQLRAAQTQSSGLTARYEQMSKIDNMLSTSTSSLATQM 110


>gi|114762176|ref|ZP_01441644.1| flagellar hook-associated protein K [Pelagibaca bermudensis
           HTCC2601]
 gi|114545200|gb|EAU48203.1| flagellar hook-associated protein K [Roseovarius sp. HTCC2601]
          Length = 486

 Score = 36.0 bits (81), Expect = 1.8,   Method: Composition-based stats.
 Identities = 8/38 (21%), Positives = 18/38 (47%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            V+   E  ++    + Y AN + I    ++M T +++
Sbjct: 449 GVDTDAELQELLRIEQHYAANARVITTVDELMQTLMNI 486



 Score = 36.0 bits (81), Expect = 1.9,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 27/74 (36%), Gaps = 6/74 (8%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            L  +   A SGL   S    +++ NIANA T          RR        +  SGGV
Sbjct: 1  MSLSGALSNALSGLTANSRSAGLVASNIANATTES------YGRRTLDLSARTLGNSGGV 54

Query: 62 RVKKIGVDQSTFVE 75
           +  +  +    V 
Sbjct: 55 WIDGVTRNVDPAVL 68


>gi|94987302|ref|YP_595235.1| flagellar basal body rod protein FlgB [Lawsonia intracellularis
           PHE/MN1-00]
 gi|94731551|emb|CAJ54914.1| Flagellar basal body protein [Lawsonia intracellularis PHE/MN1-00]
          Length = 137

 Score = 36.0 bits (81), Expect = 1.8,   Method: Composition-based stats.
 Identities = 29/113 (25%), Positives = 45/113 (39%), Gaps = 15/113 (13%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQST-- 72
           + +Q  R  +I  NIAN  T         YR +TI FE+ +  + G+ ++          
Sbjct: 16  MDMQLQRQNVIMSNIANVNTPR-------YRPRTIEFEDQLQKALGLDMRGRMSRTEENH 68

Query: 73  FVEEFDPGHPVANASGIVKYP------NVNVLVETADMRETNRLYMANLQTIK 119
               F+P    A     +K         VN+  E A+M + +  Y A  Q IK
Sbjct: 69  LPAVFNPEGFNAEWDKAIKPTVVHGEDRVNLDKEMANMAKNSLQYNALTQVIK 121


>gi|320196436|gb|EFW71059.1| Flagellar hook-associated protein FlgK [Escherichia coli WV_060327]
          Length = 547

 Score = 36.0 bits (81), Expect = 1.8,   Method: Composition-based stats.
 Identities = 15/110 (13%), Positives = 35/110 (31%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           + +  + A SGL    A +   S NI++    G T  +    +   +         GV V
Sbjct: 1   MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGGWVGNGVYV 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
             +  +   F+          ++    +Y  ++ +        ++     
Sbjct: 61  SGVQREYDAFITNQLRAAQTQSSGLTARYEQMSKIDNMLSTSTSSLATQM 110


>gi|300938647|ref|ZP_07153376.1| flagellar hook-associated protein FlgK [Escherichia coli MS 21-1]
 gi|300456432|gb|EFK19925.1| flagellar hook-associated protein FlgK [Escherichia coli MS 21-1]
          Length = 547

 Score = 36.0 bits (81), Expect = 1.8,   Method: Composition-based stats.
 Identities = 15/110 (13%), Positives = 35/110 (31%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           + +  + A SGL    A +   S NI++    G T  +    +   +         GV V
Sbjct: 1   MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGGWVGNGVYV 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
             +  +   F+          ++    +Y  ++ +        ++     
Sbjct: 61  SGVQREYDAFITNQLRAAQTQSSGLTARYEQMSKIDNMLSTSTSSLATQM 110


>gi|261408063|ref|YP_003244304.1| hypothetical protein GYMC10_4271 [Paenibacillus sp. Y412MC10]
 gi|261284526|gb|ACX66497.1| conserved hypothetical protein [Paenibacillus sp. Y412MC10]
          Length = 1073

 Score = 36.0 bits (81), Expect = 1.8,   Method: Composition-based stats.
 Identities = 26/115 (22%), Positives = 40/115 (34%), Gaps = 4/115 (3%)

Query: 22  MQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQS---TFVEEFD 78
           +  I E I  A   G       +R +   FEE+    G   + + G+  +    F     
Sbjct: 762 LDKIEEGIQRAEQLGGGIVPTYFRFEAERFEEIRDAEGSPVITRYGLPAAKVLEFKAYAL 821

Query: 79  PGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           P    A A G+ K  N        D  + + LY A L   K S  +     ++ R
Sbjct: 822 PHFLEAPARGM-KLANEGQARAMYDRIKASDLYDAALGMYKTSVSLEGEGDEIGR 875


>gi|111115003|ref|YP_709621.1| flagellar hook-associated protein FlgK [Borrelia afzelii PKo]
 gi|110890277|gb|ABH01445.1| flagellar hook-associated protein [Borrelia afzelii PKo]
          Length = 627

 Score = 36.0 bits (81), Expect = 1.8,   Method: Composition-based stats.
 Identities = 13/80 (16%), Positives = 24/80 (30%), Gaps = 7/80 (8%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDP-------YRRKTISFEE 53
          MD   +   I    L      M  +  N++NA   G +            Y  +    ++
Sbjct: 1  MDSTFSGIEIGKRSLFAHKDAMNTVGHNLSNATKPGYSRQRVTMKTAIPLYAPQLNRAKK 60

Query: 54 VMHGSGGVRVKKIGVDQSTF 73
                G+ V+ I   +   
Sbjct: 61 QGQLGQGIVVQSIDRVKDEL 80


>gi|91210234|ref|YP_540220.1| flagellar hook-associated protein FlgK [Escherichia coli UTI89]
 gi|117623268|ref|YP_852181.1| flagellar hook-associated protein FlgK [Escherichia coli APEC O1]
 gi|218557964|ref|YP_002390877.1| flagellar hook-associated protein FlgK [Escherichia coli S88]
 gi|237706932|ref|ZP_04537413.1| hook-filament junction protein FlgK [Escherichia sp. 3_2_53FAA]
 gi|306814069|ref|ZP_07448242.1| flagellar hook-associated protein FlgK [Escherichia coli NC101]
 gi|91071808|gb|ABE06689.1| hook-filament junction protein 1 [Escherichia coli UTI89]
 gi|115512392|gb|ABJ00467.1| hook-filament junction protein FlgK [Escherichia coli APEC O1]
 gi|218364733|emb|CAR02423.1| flagellar hook-filament junction protein 1 [Escherichia coli S88]
 gi|226898142|gb|EEH84401.1| hook-filament junction protein FlgK [Escherichia sp. 3_2_53FAA]
 gi|294491481|gb|ADE90237.1| flagellar hook-associated protein FlgK [Escherichia coli IHE3034]
 gi|305852706|gb|EFM53154.1| flagellar hook-associated protein FlgK [Escherichia coli NC101]
 gi|307627448|gb|ADN71752.1| flagellar hook-associated protein FlgK [Escherichia coli UM146]
 gi|315287426|gb|EFU46837.1| flagellar hook-associated protein FlgK [Escherichia coli MS 110-3]
 gi|323953232|gb|EGB49098.1| flagellar hook protein FlgK [Escherichia coli H252]
 gi|323957906|gb|EGB53618.1| flagellar hook protein FlgK [Escherichia coli H263]
          Length = 547

 Score = 36.0 bits (81), Expect = 1.8,   Method: Composition-based stats.
 Identities = 15/110 (13%), Positives = 35/110 (31%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           + +  + A SGL    A +   S NI++    G T  +    +   +         GV V
Sbjct: 1   MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGGWVGNGVYV 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
             +  +   F+          ++    +Y  ++ +        ++     
Sbjct: 61  SGVQREYDAFITNQLRAAQTQSSGLTARYEQMSKIDNMLSTSTSSLATQM 110


>gi|323190594|gb|EFZ75866.1| flagellar hook-associated protein FlgK [Escherichia coli RN587/1]
          Length = 547

 Score = 36.0 bits (81), Expect = 1.8,   Method: Composition-based stats.
 Identities = 15/110 (13%), Positives = 35/110 (31%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           + +  + A SGL    A +   S NI++    G T  +    +   +         GV V
Sbjct: 1   MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGGWVGNGVYV 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
             +  +   F+          ++    +Y  ++ +        ++     
Sbjct: 61  SGVQREYDAFITNQLRAAQTQSSGLTARYEQMSKIDNMLSTSTSSLATQM 110


>gi|302391042|ref|YP_003826862.1| flagellar hook-associated protein FlgK [Acetohalobium arabaticum
           DSM 5501]
 gi|302203119|gb|ADL11797.1| flagellar hook-associated protein FlgK [Acetohalobium arabaticum
           DSM 5501]
          Length = 801

 Score = 36.0 bits (81), Expect = 1.8,   Method: Composition-based stats.
 Identities = 19/103 (18%), Positives = 36/103 (34%), Gaps = 4/103 (3%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG- 59
           M    +   +    L VQ   + +   NI+NA T G +     +        +   G+G 
Sbjct: 1   MGSTFSGIELGKRALQVQRKSLDVTGHNISNANTEGYSRQEAIHATNRPHTIQHGTGAGQ 60

Query: 60  ---GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
              GV++ +I   +  F++        A     VK   +  + 
Sbjct: 61  VGTGVKIDEIKRVRDEFIDGQIREETSAQGKWEVKNDALEQIE 103



 Score = 34.1 bits (76), Expect = 6.4,   Method: Composition-based stats.
 Identities = 7/42 (16%), Positives = 19/42 (45%), Gaps = 1/42 (2%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD-LLR 133
             V++  E + M +  + Y A  +      +++ T ++ + R
Sbjct: 760 SGVSLDEEMSKMIKYQQSYTAAAKFTSTMDEILNTLVNGIKR 801


>gi|260867445|ref|YP_003233847.1| flagellar hook-filament junction protein FlgK [Escherichia coli
           O111:H- str. 11128]
 gi|257763801|dbj|BAI35296.1| flagellar hook-filament junction protein FlgK [Escherichia coli
           O111:H- str. 11128]
          Length = 547

 Score = 36.0 bits (81), Expect = 1.8,   Method: Composition-based stats.
 Identities = 15/110 (13%), Positives = 35/110 (31%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           + +  + A SGL    A +   S NI++    G T  +    +   +         GV V
Sbjct: 1   MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGGWVGNGVYV 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
             +  +   F+          ++    +Y  ++ +        ++     
Sbjct: 61  SGVQREYDAFITNQLRAAQTQSSGLTARYEQMSKIDNMLSTSTSSLATQM 110


>gi|254461659|ref|ZP_05075075.1| FlgK flagellar hook-associated protein 1, putative
          [Rhodobacterales bacterium HTCC2083]
 gi|206678248|gb|EDZ42735.1| FlgK flagellar hook-associated protein 1, putative
          [Rhodobacteraceae bacterium HTCC2083]
          Length = 1431

 Score = 36.0 bits (81), Expect = 1.8,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 23/53 (43%), Gaps = 7/53 (13%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMH 56
          + +   I  S ++ Q   + +  +NI NA T G       YRR+  S  EV  
Sbjct: 1  MASLLDIGRSAVSAQREALNVTGQNIVNANTEG-------YRRREASLTEVSD 46


>gi|94495414|ref|ZP_01301994.1| flagellar proximal rod protein [Sphingomonas sp. SKA58]
 gi|94424802|gb|EAT09823.1| flagellar proximal rod protein [Sphingomonas sp. SKA58]
          Length = 123

 Score = 36.0 bits (81), Expect = 1.8,   Method: Composition-based stats.
 Identities = 17/80 (21%), Positives = 27/80 (33%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M        I    LA++S R+ +++ NIANA T G       +            G+  
Sbjct: 1  MSVEDNLFGIHGKALALRSQRLSLLASNIANASTPGYKARDIDFEAALKEATAQSSGATS 60

Query: 61 VRVKKIGVDQSTFVEEFDPG 80
            + K   D   +     P 
Sbjct: 61 TDMGKAVEDAMGYRVPLQPS 80


>gi|187732740|ref|YP_001880749.1| flagellar hook-associated protein FlgK [Shigella boydii CDC
           3083-94]
 gi|187429732|gb|ACD09006.1| flagellar hook-associated protein FlgK [Shigella boydii CDC
           3083-94]
          Length = 547

 Score = 36.0 bits (81), Expect = 1.8,   Method: Composition-based stats.
 Identities = 15/110 (13%), Positives = 35/110 (31%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           + +  + A SGL    A +   S NI++    G T  +    +   +         GV V
Sbjct: 1   MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGGWVGNGVYV 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
             +  +   F+          ++    +Y  ++ +        ++     
Sbjct: 61  SGVQREYDAFITNQLRAAQTQSSGLTARYEQMSKIDNMLSTSTSSLATQM 110


>gi|315127347|ref|YP_004069350.1| flagellar hook-associated [Pseudoalteromonas sp. SM9913]
 gi|315015861|gb|ADT69199.1| flagellar hook-associated [Pseudoalteromonas sp. SM9913]
          Length = 668

 Score = 36.0 bits (81), Expect = 1.8,   Method: Composition-based stats.
 Identities = 14/40 (35%), Positives = 19/40 (47%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
              +IANSG+   S  +Q  S+NIAN  T G       +
Sbjct: 3  FNLLNIANSGIRANSELLQTTSKNIANVNTEGYVRERTEF 42


>gi|260854565|ref|YP_003228456.1| flagellar hook-filament junction protein FlgK [Escherichia coli
           O26:H11 str. 11368]
 gi|257753214|dbj|BAI24716.1| flagellar hook-filament junction protein FlgK [Escherichia coli
           O26:H11 str. 11368]
 gi|323156889|gb|EFZ43023.1| flagellar hook-associated protein FlgK [Escherichia coli EPECa14]
          Length = 547

 Score = 36.0 bits (81), Expect = 1.8,   Method: Composition-based stats.
 Identities = 15/110 (13%), Positives = 35/110 (31%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           + +  + A SGL    A +   S NI++    G T  +    +   +         GV V
Sbjct: 1   MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGGWVGNGVYV 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
             +  +   F+          ++    +Y  ++ +        ++     
Sbjct: 61  SGVQREYDAFITNQLRAAQTQSSGLTARYEQMSKIDNMLSTSTSSLATQM 110


>gi|110641258|ref|YP_668988.1| flagellar hook-associated protein FlgK [Escherichia coli 536]
 gi|191172473|ref|ZP_03034014.1| flagellar hook-associated protein FlgK [Escherichia coli F11]
 gi|300982573|ref|ZP_07176195.1| flagellar hook-associated protein FlgK [Escherichia coli MS 200-1]
 gi|110342850|gb|ABG69087.1| flagellar hook-associated protein 1 [Escherichia coli 536]
 gi|190907357|gb|EDV66955.1| flagellar hook-associated protein FlgK [Escherichia coli F11]
 gi|300307154|gb|EFJ61674.1| flagellar hook-associated protein FlgK [Escherichia coli MS 200-1]
 gi|324013281|gb|EGB82500.1| flagellar hook-associated protein FlgK [Escherichia coli MS 60-1]
          Length = 547

 Score = 36.0 bits (81), Expect = 1.8,   Method: Composition-based stats.
 Identities = 15/110 (13%), Positives = 35/110 (31%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           + +  + A SGL    A +   S NI++    G T  +    +   +         GV V
Sbjct: 1   MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGGWVGNGVYV 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
             +  +   F+          ++    +Y  ++ +        ++     
Sbjct: 61  SGVQREYDAFITNQLRAAQTQSSGLTARYEQMSKIDNMLSTSTSSLATQM 110


>gi|157160609|ref|YP_001457927.1| flagellar hook-associated protein FlgK [Escherichia coli HS]
 gi|170020522|ref|YP_001725476.1| flagellar hook-associated protein FlgK [Escherichia coli ATCC 8739]
 gi|312971219|ref|ZP_07785397.1| flagellar hook-associated protein FlgK [Escherichia coli 1827-70]
 gi|157066289|gb|ABV05544.1| flagellar hook-associated protein FlgK [Escherichia coli HS]
 gi|169755450|gb|ACA78149.1| flagellar hook-associated protein FlgK [Escherichia coli ATCC 8739]
 gi|310336421|gb|EFQ01607.1| flagellar hook-associated protein FlgK [Escherichia coli 1827-70]
          Length = 547

 Score = 36.0 bits (81), Expect = 1.8,   Method: Composition-based stats.
 Identities = 15/110 (13%), Positives = 35/110 (31%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           + +  + A SGL    A +   S NI++    G T  +    +   +         GV V
Sbjct: 1   MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGGWVGNGVYV 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
             +  +   F+          ++    +Y  ++ +        ++     
Sbjct: 61  SGVQREYDAFITNQLRAAQTQSSGLTARYEQMSKIDNMLSTSTSSLATQM 110


>gi|196039147|ref|ZP_03106454.1| putative flagellar basal-body rod protein [Bacillus cereus
           NVH0597-99]
 gi|196030292|gb|EDX68892.1| putative flagellar basal-body rod protein [Bacillus cereus
           NVH0597-99]
          Length = 249

 Score = 36.0 bits (81), Expect = 1.8,   Method: Composition-based stats.
 Identities = 10/64 (15%), Positives = 25/64 (39%), Gaps = 1/64 (1%)

Query: 71  STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT-TL 129
           +       P       + +++  NV++  E AD+    R+  A+ + +     +      
Sbjct: 186 AEGNIADLPNGVGTVKNYMLENSNVDMTKEMADLMTDQRMISASQRVMTSFDKIYEKEAN 245

Query: 130 DLLR 133
           ++LR
Sbjct: 246 EILR 249


>gi|168698713|ref|ZP_02730990.1| flagellar basal-body rod protein FlgB [Gemmata obscuriglobus UQM
           2246]
          Length = 116

 Score = 36.0 bits (81), Expect = 1.8,   Method: Composition-based stats.
 Identities = 23/130 (17%), Positives = 43/130 (33%), Gaps = 16/130 (12%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M+  +    +    L     R ++I++N+AN  T G       +       + +   +GG
Sbjct: 1   MNTNLPGLSVLTQLLDASGLRHRVIAQNVANVNTPGYKRLEVAFEA--DLAKALASPTGG 58

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
             VK              P     +    V   NV++  E   + +   LY A  Q I  
Sbjct: 59  TPVK--------------PRVVTGDGPERVDGNNVDIDAEMNALAKNALLYQAATQIIAS 104

Query: 121 SHDMMTTTLD 130
               + + + 
Sbjct: 105 RVGTLRSAIS 114


>gi|91225879|ref|ZP_01260848.1| flagellar hook-associated protein K [Vibrio alginolyticus 12G01]
 gi|91189529|gb|EAS75805.1| flagellar hook-associated protein K [Vibrio alginolyticus 12G01]
          Length = 646

 Score = 36.0 bits (81), Expect = 1.8,   Method: Composition-based stats.
 Identities = 21/120 (17%), Positives = 34/120 (28%), Gaps = 1/120 (0%)

Query: 13  SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQST 72
           S L  Q   +     NI+N  T G +  S                  GV V+ +      
Sbjct: 12  SVLTAQRQ-LNTTGHNISNVNTEGYSRQSVIQGTNDPRLFGGSTYGMGVHVENVRRSWDQ 70

Query: 73  FVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           F           NA+      N+++L        + ++     +       M  T  DL 
Sbjct: 71  FAVNELNLSSTNNANKTDTQDNLDMLSSMLSSVASKKIPENLNEWFDAVKTMADTPNDLG 130



 Score = 35.6 bits (80), Expect = 2.3,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 22/39 (56%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN+  E A+M +  + YMA+ + ++ ++D   T L L
Sbjct: 607 SGVNLDEEAANMMKFQQAYMASSRVMQAANDTFNTILQL 645


>gi|127512285|ref|YP_001093482.1| flagellar hook-associated protein FlgK [Shewanella loihica PV-4]
 gi|126637580|gb|ABO23223.1| flagellar hook-associated protein FlgK [Shewanella loihica PV-4]
          Length = 638

 Score = 36.0 bits (81), Expect = 1.8,   Method: Composition-based stats.
 Identities = 13/101 (12%), Positives = 29/101 (28%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           +   +IA +G+    +++ + S NI NA T G                       G  + 
Sbjct: 3   MDLLNIARTGVLASQSQLAVTSNNITNANTQGYHRQVAEQSSLESQRLGNSFYGAGTYIT 62

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
            +    + +          A +        ++ L +     
Sbjct: 63  DVKRIYNEYAARELRIGQTALSQAQTTQTKMSELDQLFSQI 103


>gi|229011065|ref|ZP_04168259.1| Flagellar basal-body rod protein flgG [Bacillus mycoides DSM 2048]
 gi|228750237|gb|EEM00069.1| Flagellar basal-body rod protein flgG [Bacillus mycoides DSM 2048]
          Length = 257

 Score = 36.0 bits (81), Expect = 1.8,   Method: Composition-based stats.
 Identities = 10/64 (15%), Positives = 26/64 (40%), Gaps = 1/64 (1%)

Query: 71  STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT-TL 129
           +       P    A  + +++  NV++  E AD+    ++  A+ + +     +      
Sbjct: 194 AEGNVADLPNGTGAVRNHMLENSNVDMTKEMADLMTNQKMIQASQRIMTSFDKIYEKEAN 253

Query: 130 DLLR 133
           ++LR
Sbjct: 254 EILR 257


>gi|218288291|ref|ZP_03492590.1| flagellar basal-body rod protein FlgB [Alicyclobacillus
           acidocaldarius LAA1]
 gi|218241650|gb|EED08823.1| flagellar basal-body rod protein FlgB [Alicyclobacillus
           acidocaldarius LAA1]
          Length = 134

 Score = 36.0 bits (81), Expect = 1.8,   Method: Composition-based stats.
 Identities = 18/115 (15%), Positives = 34/115 (29%), Gaps = 6/115 (5%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY------RRKTISFEEVMHGS 58
           +    +  S L   + R  + + NIANA T G       +         +     +    
Sbjct: 1   MTVFELLQSALDASTLRQAVYANNIANAGTPGYKRQDVAFETLLQSALGSGDSNALGEAQ 60

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
             +  ++   D S         +   + +      NV++  E   M E    Y  
Sbjct: 61  IPIGAQRPSYDLSALPNVIPEVYTDTSTTVNSNGNNVDITEEMVLMAENQVRYDT 115


>gi|224534287|ref|ZP_03674865.1| flagellar hook-associated protein FlgK [Borrelia spielmanii A14S]
 gi|224514389|gb|EEF84705.1| flagellar hook-associated protein FlgK [Borrelia spielmanii A14S]
          Length = 627

 Score = 36.0 bits (81), Expect = 1.8,   Method: Composition-based stats.
 Identities = 13/80 (16%), Positives = 24/80 (30%), Gaps = 7/80 (8%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDP-------YRRKTISFEE 53
          MD   +   I    L      M  +  N++NA   G +            Y  +    ++
Sbjct: 1  MDSTFSGIEIGKRSLFAHKDAMNTVGHNLSNATKPGYSRQRVTMTTTTPLYAPQLNRAKK 60

Query: 54 VMHGSGGVRVKKIGVDQSTF 73
                G+ V+ I   +   
Sbjct: 61 QGQLGQGIMVQSIDRVKDEL 80


>gi|451871|gb|AAB59019.1| flagellar hook-filament junction protein [Bacillus subtilis]
          Length = 129

 Score = 36.0 bits (81), Expect = 1.8,   Method: Composition-based stats.
 Identities = 20/95 (21%), Positives = 31/95 (32%), Gaps = 5/95 (5%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTP-----GSDPYRRKTISFEEVM 55
          M         A   L+ Q A +   + N+ANA T G T       +  Y        E  
Sbjct: 1  MTSTFMGLETARRALSAQQAALSTTANNVANANTDGYTRQRVSLEATDYFPAVSKNAEKT 60

Query: 56 HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           G  G  V+   V++   +          N++G  
Sbjct: 61 AGQMGTGVQGKSVERIRDIFLDYQYRLQNNSAGYY 95


>gi|293414375|ref|ZP_06657024.1| flagellar hook-associated protein FlgK [Escherichia coli B185]
 gi|291434433|gb|EFF07406.1| flagellar hook-associated protein FlgK [Escherichia coli B185]
          Length = 547

 Score = 36.0 bits (81), Expect = 1.9,   Method: Composition-based stats.
 Identities = 15/110 (13%), Positives = 35/110 (31%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           + +  + A SGL    A +   S NI++    G T  +    +   +         GV V
Sbjct: 1   MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGGWVGNGVYV 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
             +  +   F+          ++    +Y  ++ +        ++     
Sbjct: 61  SGVQREYDAFITNQLRAAQTQSSGLTARYEQMSKIDNMLSTSTSSLATQM 110


>gi|218689035|ref|YP_002397247.1| flagellar hook-associated protein FlgK [Escherichia coli ED1a]
 gi|218426599|emb|CAR07427.1| flagellar hook-filament junction protein 1 [Escherichia coli ED1a]
          Length = 547

 Score = 36.0 bits (81), Expect = 1.9,   Method: Composition-based stats.
 Identities = 15/110 (13%), Positives = 35/110 (31%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           + +  + A SGL    A +   S NI++    G T  +    +   +         GV V
Sbjct: 1   MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGGWVGNGVYV 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
             +  +   F+          ++    +Y  ++ +        ++     
Sbjct: 61  SGVQREYDAFITNQLRAAQTQSSGLTARYEQMSKIDNMLSTSTSSLATQM 110


>gi|254457917|ref|ZP_05071344.1| flagellar basal body rod protein [Campylobacterales bacterium GD
          1]
 gi|207085310|gb|EDZ62595.1| flagellar basal body rod protein [Campylobacterales bacterium GD
          1]
          Length = 273

 Score = 36.0 bits (81), Expect = 1.9,   Method: Composition-based stats.
 Identities = 9/38 (23%), Positives = 19/38 (50%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGS 41
          + +  + + +G+  Q  R+  I+ N+AN  T G    +
Sbjct: 1  MQSGYYSSAAGMVTQFNRLDTIANNLANVNTVGFKEDN 38



 Score = 33.7 bits (75), Expect = 9.8,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 21/52 (40%), Gaps = 1/52 (1%)

Query: 80  GHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS-HDMMTTTLD 130
            +  A   G V+  NVN +     M ETNRL     + +     DM    ++
Sbjct: 216 DNTEAVMQGFVEKSNVNAVKMMTQMIETNRLVGMYQKAMSVQMDDMNNDAIN 267


>gi|188492078|ref|ZP_02999348.1| flagellar hook-associated protein FlgK [Escherichia coli 53638]
 gi|188487277|gb|EDU62380.1| flagellar hook-associated protein FlgK [Escherichia coli 53638]
          Length = 547

 Score = 36.0 bits (81), Expect = 1.9,   Method: Composition-based stats.
 Identities = 15/110 (13%), Positives = 35/110 (31%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           + +  + A SGL    A +   S NI++    G T  +    +   +         GV V
Sbjct: 1   MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGGWVGNGVYV 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
             +  +   F+          ++    +Y  ++ +        ++     
Sbjct: 61  SGVQREYDAFITNQLRAAQTQSSGLTARYEQMSKIDNMLSTSTSSLATQM 110


>gi|30261777|ref|NP_844154.1| flagellar basal body rod protein FlgG [Bacillus anthracis str.
           Ames]
 gi|47527010|ref|YP_018359.1| flagellar basal body rod protein FlgG [Bacillus anthracis str.
           'Ames Ancestor']
 gi|49184611|ref|YP_027863.1| flagellar basal body rod protein FlgG [Bacillus anthracis str.
           Sterne]
 gi|65319054|ref|ZP_00392013.1| COG4786: Flagellar basal body rod protein [Bacillus anthracis str.
           A2012]
 gi|167633188|ref|ZP_02391513.1| putative flagellar basal-body rod protein [Bacillus anthracis str.
           A0442]
 gi|167638782|ref|ZP_02397057.1| putative flagellar basal-body rod protein [Bacillus anthracis str.
           A0193]
 gi|170686326|ref|ZP_02877548.1| putative flagellar basal-body rod protein [Bacillus anthracis str.
           A0465]
 gi|170706443|ref|ZP_02896903.1| putative flagellar basal-body rod protein [Bacillus anthracis str.
           A0389]
 gi|177650448|ref|ZP_02933415.1| putative flagellar basal-body rod protein [Bacillus anthracis str.
           A0174]
 gi|228914350|ref|ZP_04077965.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
 gi|229121324|ref|ZP_04250555.1| Flagellar basal-body rod protein flgG [Bacillus cereus 95/8201]
 gi|229600237|ref|YP_002866164.1| putative flagellar basal-body rod protein [Bacillus anthracis str.
           A0248]
 gi|254683274|ref|ZP_05147135.1| flagellar basal body rod protein FlgG [Bacillus anthracis str.
           CNEVA-9066]
 gi|254723857|ref|ZP_05185643.1| flagellar basal body rod protein FlgG [Bacillus anthracis str.
           A1055]
 gi|254734627|ref|ZP_05192339.1| flagellar basal body rod protein FlgG [Bacillus anthracis str.
           Western North America USA6153]
 gi|254741036|ref|ZP_05198724.1| flagellar basal body rod protein FlgG [Bacillus anthracis str.
           Kruger B]
 gi|254755279|ref|ZP_05207313.1| flagellar basal body rod protein FlgG [Bacillus anthracis str.
           Vollum]
 gi|254759816|ref|ZP_05211840.1| flagellar basal body rod protein FlgG [Bacillus anthracis str.
           Australia 94]
 gi|30256005|gb|AAP25640.1| putative flagellar basal-body rod protein [Bacillus anthracis str.
           Ames]
 gi|47502158|gb|AAT30834.1| putative flagellar basal-body rod protein [Bacillus anthracis str.
           'Ames Ancestor']
 gi|49178538|gb|AAT53914.1| flagellar basal-body rod protein, putative [Bacillus anthracis str.
           Sterne]
 gi|167513246|gb|EDR88617.1| putative flagellar basal-body rod protein [Bacillus anthracis str.
           A0193]
 gi|167531226|gb|EDR93904.1| putative flagellar basal-body rod protein [Bacillus anthracis str.
           A0442]
 gi|170128541|gb|EDS97408.1| putative flagellar basal-body rod protein [Bacillus anthracis str.
           A0389]
 gi|170670023|gb|EDT20764.1| putative flagellar basal-body rod protein [Bacillus anthracis str.
           A0465]
 gi|172083592|gb|EDT68652.1| putative flagellar basal-body rod protein [Bacillus anthracis str.
           A0174]
 gi|228662169|gb|EEL17778.1| Flagellar basal-body rod protein flgG [Bacillus cereus 95/8201]
 gi|228845344|gb|EEM90380.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
 gi|229264645|gb|ACQ46282.1| putative flagellar basal-body rod protein [Bacillus anthracis str.
           A0248]
          Length = 257

 Score = 36.0 bits (81), Expect = 1.9,   Method: Composition-based stats.
 Identities = 10/64 (15%), Positives = 25/64 (39%), Gaps = 1/64 (1%)

Query: 71  STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT-TL 129
           +       P       + +++  NV++  E AD+    R+  A+ + +     +      
Sbjct: 194 AEGNIADLPNGVGTVKNYMLENSNVDMTKEMADLMTDQRMISASQRVMTSFDKIYEKEAN 253

Query: 130 DLLR 133
           ++LR
Sbjct: 254 EILR 257


>gi|15801199|ref|NP_287216.1| flagellar hook-associated protein FlgK [Escherichia coli O157:H7
           EDL933]
 gi|15830714|ref|NP_309487.1| flagellar hook-associated protein FlgK [Escherichia coli O157:H7
           str. Sakai]
 gi|168747142|ref|ZP_02772164.1| flagellar hook-associated protein FlgK [Escherichia coli O157:H7
           str. EC4113]
 gi|168758625|ref|ZP_02783632.1| flagellar hook-associated protein FlgK [Escherichia coli O157:H7
           str. EC4401]
 gi|168764494|ref|ZP_02789501.1| flagellar hook-associated protein FlgK [Escherichia coli O157:H7
           str. EC4501]
 gi|168767741|ref|ZP_02792748.1| flagellar hook-associated protein FlgK [Escherichia coli O157:H7
           str. EC4486]
 gi|168773927|ref|ZP_02798934.1| flagellar hook-associated protein FlgK [Escherichia coli O157:H7
           str. EC4196]
 gi|168783612|ref|ZP_02808619.1| flagellar hook-associated protein FlgK [Escherichia coli O157:H7
           str. EC4076]
 gi|168790017|ref|ZP_02815024.1| flagellar hook-associated protein FlgK [Escherichia coli O157:H7
           str. EC869]
 gi|168802027|ref|ZP_02827034.1| flagellar hook-associated protein FlgK [Escherichia coli O157:H7
           str. EC508]
 gi|195935472|ref|ZP_03080854.1| flagellar hook-associated protein FlgK [Escherichia coli O157:H7
           str. EC4024]
 gi|208808965|ref|ZP_03251302.1| flagellar hook-associated protein FlgK [Escherichia coli O157:H7
           str. EC4206]
 gi|208815841|ref|ZP_03257020.1| flagellar hook-associated protein FlgK [Escherichia coli O157:H7
           str. EC4045]
 gi|208822064|ref|ZP_03262383.1| flagellar hook-associated protein FlgK [Escherichia coli O157:H7
           str. EC4042]
 gi|209396607|ref|YP_002269928.1| flagellar hook-associated protein FlgK [Escherichia coli O157:H7
           str. EC4115]
 gi|217328179|ref|ZP_03444261.1| flagellar hook-associated protein FlgK [Escherichia coli O157:H7
           str. TW14588]
 gi|254792464|ref|YP_003077301.1| flagellar hook-associated protein FlgK [Escherichia coli O157:H7
           str. TW14359]
 gi|261227013|ref|ZP_05941294.1| flagellar hook-filament junction protein 1 [Escherichia coli
           O157:H7 str. FRIK2000]
 gi|261256247|ref|ZP_05948780.1| flagellar hook-filament junction protein 1 [Escherichia coli
           O157:H7 str. FRIK966]
 gi|12514623|gb|AAG55828.1|AE005318_5 flagellar biosynthesis, hook-filament junction protein 1
           [Escherichia coli O157:H7 str. EDL933]
 gi|13360924|dbj|BAB34883.1| flagellar hook-filament junction protein 1 FlgK [Escherichia coli
           O157:H7 str. Sakai]
 gi|187770507|gb|EDU34351.1| flagellar hook-associated protein FlgK [Escherichia coli O157:H7
           str. EC4196]
 gi|188018095|gb|EDU56217.1| flagellar hook-associated protein FlgK [Escherichia coli O157:H7
           str. EC4113]
 gi|188999081|gb|EDU68067.1| flagellar hook-associated protein FlgK [Escherichia coli O157:H7
           str. EC4076]
 gi|189354572|gb|EDU72991.1| flagellar hook-associated protein FlgK [Escherichia coli O157:H7
           str. EC4401]
 gi|189363324|gb|EDU81743.1| flagellar hook-associated protein FlgK [Escherichia coli O157:H7
           str. EC4486]
 gi|189365527|gb|EDU83943.1| flagellar hook-associated protein FlgK [Escherichia coli O157:H7
           str. EC4501]
 gi|189370488|gb|EDU88904.1| flagellar hook-associated protein FlgK [Escherichia coli O157:H7
           str. EC869]
 gi|189375922|gb|EDU94338.1| flagellar hook-associated protein FlgK [Escherichia coli O157:H7
           str. EC508]
 gi|208728766|gb|EDZ78367.1| flagellar hook-associated protein FlgK [Escherichia coli O157:H7
           str. EC4206]
 gi|208732489|gb|EDZ81177.1| flagellar hook-associated protein FlgK [Escherichia coli O157:H7
           str. EC4045]
 gi|208737549|gb|EDZ85232.1| flagellar hook-associated protein FlgK [Escherichia coli O157:H7
           str. EC4042]
 gi|209158007|gb|ACI35440.1| flagellar hook-associated protein FlgK [Escherichia coli O157:H7
           str. EC4115]
 gi|209773318|gb|ACI84971.1| flagellar hook-filament junction protein 1 FlgK [Escherichia coli]
 gi|209773320|gb|ACI84972.1| flagellar hook-filament junction protein 1 FlgK [Escherichia coli]
 gi|209773322|gb|ACI84973.1| flagellar hook-filament junction protein 1 FlgK [Escherichia coli]
 gi|209773326|gb|ACI84975.1| flagellar hook-filament junction protein 1 FlgK [Escherichia coli]
 gi|217318606|gb|EEC27032.1| flagellar hook-associated protein FlgK [Escherichia coli O157:H7
           str. TW14588]
 gi|254591864|gb|ACT71225.1| flagellar hook-filament junction protein 1 [Escherichia coli
           O157:H7 str. TW14359]
 gi|320189765|gb|EFW64421.1| Flagellar hook-associated protein FlgK [Escherichia coli O157:H7
           str. EC1212]
 gi|320637533|gb|EFX07333.1| flagellar hook-associated protein FlgK [Escherichia coli O157:H7
           str. G5101]
 gi|320643094|gb|EFX12295.1| flagellar hook-associated protein FlgK [Escherichia coli O157:H-
           str. 493-89]
 gi|320648552|gb|EFX17207.1| flagellar hook-associated protein FlgK [Escherichia coli O157:H-
           str. H 2687]
 gi|320653866|gb|EFX21940.1| flagellar hook-associated protein FlgK [Escherichia coli O55:H7
           str. 3256-97 TW 07815]
 gi|326339304|gb|EGD63118.1| Flagellar hook-associated protein FlgK [Escherichia coli O157:H7
           str. 1125]
 gi|326344735|gb|EGD68483.1| Flagellar hook-associated protein FlgK [Escherichia coli O157:H7
           str. 1044]
          Length = 547

 Score = 36.0 bits (81), Expect = 1.9,   Method: Composition-based stats.
 Identities = 15/110 (13%), Positives = 35/110 (31%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           + +  + A SGL    A +   S NI++    G T  +    +   +         GV V
Sbjct: 1   MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGGWVGNGVYV 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
             +  +   F+          ++    +Y  ++ +        ++     
Sbjct: 61  SGVQREYDAFITNQLRAAQTQSSGLTARYEQMSKIDNMLSTSTSSLATQM 110


>gi|27380964|ref|NP_772493.1| hypothetical protein bll5853 [Bradyrhizobium japonicum USDA 110]
 gi|27354130|dbj|BAC51118.1| bll5853 [Bradyrhizobium japonicum USDA 110]
          Length = 627

 Score = 36.0 bits (81), Expect = 1.9,   Method: Composition-based stats.
 Identities = 14/112 (12%), Positives = 37/112 (33%)

Query: 19  SARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFD 78
           + R   +   + NA  +           +  +     +    + ++     Q+T +++  
Sbjct: 513 TTRSDYLYSQLTNAVFSYSPTTGLGSANQPFTGSVSNYLQQFLSIQGNAATQATQLQQGQ 572

Query: 79  PGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
                   +      +VN+  E +++ +    Y AN   +     MM T + 
Sbjct: 573 SVVVSTLQAKFNSTSSVNLDSEMSNLIQLQNAYAANAHVMSVVQSMMNTLIQ 624


>gi|320538492|ref|ZP_08038355.1| flagellar hook-associated protein FlgK [Treponema phagedenis F0421]
 gi|320144663|gb|EFW36416.1| flagellar hook-associated protein FlgK [Treponema phagedenis F0421]
          Length = 625

 Score = 36.0 bits (81), Expect = 1.9,   Method: Composition-based stats.
 Identities = 9/38 (23%), Positives = 20/38 (52%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             VN+  E +D+ +    Y A+ + I   ++M+ T ++
Sbjct: 584 SGVNIDEELSDIIKFQHGYNASARFIATVNEMLDTIIN 621


>gi|291334320|gb|ADD93981.1| flagellar hook associated protein 1 [uncultured marine bacterium
          MedDCM-OCT-S09-C247]
          Length = 354

 Score = 36.0 bits (81), Expect = 1.9,   Method: Composition-based stats.
 Identities = 12/70 (17%), Positives = 20/70 (28%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +     IA SGL      +    +NIAN           P      S + +   +     
Sbjct: 1  MSDIYGIAKSGLQAYKEGLATTGQNIANVGNKDYARREAPVSEVKSSNDVLQVSNTAGFG 60

Query: 64 KKIGVDQSTF 73
           ++      F
Sbjct: 61 VRVDGITRAF 70


>gi|260429026|ref|ZP_05783003.1| flagellar hook-associated protein FlgK [Citreicella sp. SE45]
 gi|260419649|gb|EEX12902.1| flagellar hook-associated protein FlgK [Citreicella sp. SE45]
          Length = 485

 Score = 36.0 bits (81), Expect = 1.9,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 17/39 (43%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             V+   E  +M    + Y AN + I    ++M T L +
Sbjct: 447 AGVDTDAELQEMLRIEQHYAANARVITTVDELMQTLLSI 485



 Score = 35.2 bits (79), Expect = 3.4,   Method: Composition-based stats.
 Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 7/65 (10%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            L  +   A SGL   S    +++ NIANA T         Y R+T+       G GGV
Sbjct: 1  MSLSGALSNALSGLTANSRAASLVASNIANATTES-------YGRRTLETSSRTVGVGGV 53

Query: 62 RVKKI 66
          ++  +
Sbjct: 54 QIDGV 58


>gi|228984822|ref|ZP_04144994.1| Flagellar hook-associated protein FlgK [Bacillus thuringiensis
           serovar tochigiensis BGSC 4Y1]
 gi|228775020|gb|EEM23414.1| Flagellar hook-associated protein FlgK [Bacillus thuringiensis
           serovar tochigiensis BGSC 4Y1]
          Length = 432

 Score = 36.0 bits (81), Expect = 1.9,   Method: Composition-based stats.
 Identities = 7/40 (17%), Positives = 20/40 (50%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            VN+  E  ++    + ++AN + I   +++  +   ++R
Sbjct: 393 GVNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSLFSIIR 432


>gi|229102371|ref|ZP_04233079.1| Flagellar basal-body rod protein flgG [Bacillus cereus Rock3-28]
 gi|228681018|gb|EEL35187.1| Flagellar basal-body rod protein flgG [Bacillus cereus Rock3-28]
          Length = 267

 Score = 36.0 bits (81), Expect = 1.9,   Method: Composition-based stats.
 Identities = 9/64 (14%), Positives = 25/64 (39%), Gaps = 1/64 (1%)

Query: 71  STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT-TL 129
           +       P         +++  NV++  E AD+  + ++  A+ + +     +      
Sbjct: 204 AEGNIANLPNGTGIVKDHMLENSNVDMTKEMADLMSSQKMIQASQRIMTSFDKIYEKEAN 263

Query: 130 DLLR 133
           ++LR
Sbjct: 264 EILR 267


>gi|225569938|ref|ZP_03778963.1| hypothetical protein CLOHYLEM_06033 [Clostridium hylemonae DSM
           15053]
 gi|225161408|gb|EEG74027.1| hypothetical protein CLOHYLEM_06033 [Clostridium hylemonae DSM
           15053]
          Length = 515

 Score = 36.0 bits (81), Expect = 1.9,   Method: Composition-based stats.
 Identities = 10/70 (14%), Positives = 24/70 (34%)

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
             V+ I    S  + +         +        VN+  E  D+   ++ Y A  + +  
Sbjct: 439 QNVQAIERKASASILKNHLTVLNQISDSRDAVSGVNMDEEVMDLMRYHQSYNAASRLMTT 498

Query: 121 SHDMMTTTLD 130
             +M+   ++
Sbjct: 499 MDEMLDKLIN 508



 Score = 34.5 bits (77), Expect = 5.7,   Method: Composition-based stats.
 Identities = 22/128 (17%), Positives = 40/128 (31%), Gaps = 6/128 (4%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGS------DPYRRKTISFEEVMHGS 58
            A   +A   L+     + +  +N++N  T G T          P      S        
Sbjct: 6   FAGFTMAQQALSANQRAIDVAGQNLSNINTPGYTRQRLDLASISPVGASFSSSVYDNKVG 65

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
            GV +K I   +  F++           +   +   +  L E  D  ++  +  A    I
Sbjct: 66  QGVMMKGISQIRDPFLDIQYRNQIAKVGTADAEDQILERLGEIFDETDSAAVREAFNNVI 125

Query: 119 KQSHDMMT 126
            Q  +M  
Sbjct: 126 TQLKNMAN 133


>gi|149184213|ref|ZP_01862531.1| Flagellar hook-associated protein [Erythrobacter sp. SD-21]
 gi|148831533|gb|EDL49966.1| Flagellar hook-associated protein [Erythrobacter sp. SD-21]
          Length = 446

 Score = 36.0 bits (81), Expect = 1.9,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 22/43 (51%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +   V++  E A++    + + A+ + ++ + D+  T L + R
Sbjct: 404 QQSGVDLDTEAANLIRFQQAFQASGRAMQAASDIFNTLLGIGR 446


>gi|52143687|ref|YP_083142.1| flagellar basal body rod protein FlgG [Bacillus cereus E33L]
 gi|51977156|gb|AAU18706.1| flagellar basal-body rod protein [Bacillus cereus E33L]
          Length = 257

 Score = 36.0 bits (81), Expect = 1.9,   Method: Composition-based stats.
 Identities = 10/64 (15%), Positives = 26/64 (40%), Gaps = 1/64 (1%)

Query: 71  STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT-TL 129
           +    +  P       + +++  NV++  E AD+    R+  A+ + +     +      
Sbjct: 194 AEGNIDDLPNGTGLVKNHMLENSNVDMTKEMADLMTDQRMISASQRVMTSFDKIYEKEAN 253

Query: 130 DLLR 133
           ++LR
Sbjct: 254 EILR 257


>gi|34498334|ref|NP_902549.1| flagellar hook-associated protein 1 [Chromobacterium violaceum ATCC
           12472]
 gi|34104188|gb|AAQ60547.1| flagellar hook-associated protein 1 [Chromobacterium violaceum ATCC
           12472]
          Length = 595

 Score = 36.0 bits (81), Expect = 1.9,   Method: Composition-based stats.
 Identities = 21/125 (16%), Positives = 35/125 (28%), Gaps = 5/125 (4%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
               I  SGL V    + + S NI+N  T G          +T       +   GV    
Sbjct: 7   DVFGIGLSGLNVAQNALSVTSNNISNVNTPGYNAQYMTQAGRTPVNAGFGYLGQGVDATS 66

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           +    + ++         A  +          L + A+M        +    I+     M
Sbjct: 67  VMRTYNQYLVTQM---QTAQTNSSYYTTQSQQLQQVANMI--QNSTQSVSPAIQSFFGAM 121

Query: 126 TTTLD 130
            T   
Sbjct: 122 QTLTQ 126


>gi|309788151|ref|ZP_07682757.1| flagellar hook-associated protein FlgK [Shigella dysenteriae 1617]
 gi|308924003|gb|EFP69504.1| flagellar hook-associated protein FlgK [Shigella dysenteriae 1617]
          Length = 366

 Score = 36.0 bits (81), Expect = 1.9,   Method: Composition-based stats.
 Identities = 15/110 (13%), Positives = 35/110 (31%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           + +  + A SGL    A +   S NI++    G T  +    +   +         GV V
Sbjct: 1   MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGGWVGNGVYV 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
             +  +   F+          ++    +Y  ++ +        ++     
Sbjct: 61  SGVQREYDAFITNQLRAAQTQSSGLTARYEQMSKIDNMLSTSTSSLATQM 110


>gi|254508414|ref|ZP_05120534.1| flagellar hook-associated protein FlgK [Vibrio parahaemolyticus 16]
 gi|219548624|gb|EED25629.1| flagellar hook-associated protein FlgK [Vibrio parahaemolyticus 16]
          Length = 624

 Score = 36.0 bits (81), Expect = 1.9,   Method: Composition-based stats.
 Identities = 19/122 (15%), Positives = 36/122 (29%), Gaps = 1/122 (0%)

Query: 11  ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQ 70
           + S L  Q   +     NI+NA T G +  S                  GV V+K+    
Sbjct: 10  SQSVLTAQRQ-LNTTGHNISNANTEGYSRQSVVQGTNIPRQYGGETYGMGVHVEKVRRSW 68

Query: 71  STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             F           +A  +    N+ +L        + ++     +       +  +  D
Sbjct: 69  DQFAVNELNMSTTNHAHKLDDEANLEMLSNMLSSVSSKKIPENINEWFDAVKSLADSPND 128

Query: 131 LL 132
           + 
Sbjct: 129 VG 130


>gi|219685806|ref|ZP_03540615.1| flagellar hook-associated protein FlgK [Borrelia garinii Far04]
 gi|219672639|gb|EED29669.1| flagellar hook-associated protein FlgK [Borrelia garinii Far04]
          Length = 627

 Score = 36.0 bits (81), Expect = 1.9,   Method: Composition-based stats.
 Identities = 13/80 (16%), Positives = 24/80 (30%), Gaps = 7/80 (8%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDP-------YRRKTISFEE 53
          MD   +   I    L      M  +  N++NA   G +            Y  +    ++
Sbjct: 1  MDSTFSGIEIGKRSLFAHKDAMNTVGHNLSNATKPGYSRQRVTMKTEIPLYAPQLNRAKK 60

Query: 54 VMHGSGGVRVKKIGVDQSTF 73
                G+ V+ I   +   
Sbjct: 61 QGQLGQGIVVQSIDRVKDEL 80


>gi|216263829|ref|ZP_03435823.1| flagellar hook-associated protein FlgK [Borrelia afzelii ACA-1]
 gi|215979873|gb|EEC20695.1| flagellar hook-associated protein FlgK [Borrelia afzelii ACA-1]
          Length = 627

 Score = 36.0 bits (81), Expect = 1.9,   Method: Composition-based stats.
 Identities = 13/80 (16%), Positives = 24/80 (30%), Gaps = 7/80 (8%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDP-------YRRKTISFEE 53
          MD   +   I    L      M  +  N++NA   G +            Y  +    ++
Sbjct: 1  MDSTFSGIEIGKRSLFAHKDAMNTVGHNLSNATKPGYSRQRVTMKTAIPLYAPQLNRAKK 60

Query: 54 VMHGSGGVRVKKIGVDQSTF 73
                G+ V+ I   +   
Sbjct: 61 QGQLGQGIVVQSIDRVKDEL 80


>gi|51598442|ref|YP_072630.1| flagellar hook-associated protein FlgK [Borrelia garinii PBi]
 gi|51573013|gb|AAU07038.1| flagellar hook-associated protein [Borrelia garinii PBi]
          Length = 627

 Score = 36.0 bits (81), Expect = 1.9,   Method: Composition-based stats.
 Identities = 13/80 (16%), Positives = 24/80 (30%), Gaps = 7/80 (8%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDP-------YRRKTISFEE 53
          MD   +   I    L      M  +  N++NA   G +            Y  +    ++
Sbjct: 1  MDSTFSGIEIGKRSLFAHKDAMNTVGHNLSNATKPGYSRQRVTMKTEIPLYAPQLNRAKK 60

Query: 54 VMHGSGGVRVKKIGVDQSTF 73
                G+ V+ I   +   
Sbjct: 61 QGQLGQGIVVQSIDRVKDEL 80


>gi|163939582|ref|YP_001644466.1| flagellar basal body rod protein FlgG [Bacillus weihenstephanensis
           KBAB4]
 gi|163861779|gb|ABY42838.1| flagellar basal body rod protein [Bacillus weihenstephanensis
           KBAB4]
          Length = 257

 Score = 36.0 bits (81), Expect = 1.9,   Method: Composition-based stats.
 Identities = 10/64 (15%), Positives = 26/64 (40%), Gaps = 1/64 (1%)

Query: 71  STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT-TL 129
           +       P    A  + +++  NV++  E AD+    ++  A+ + +     +      
Sbjct: 194 AEGNVADLPNGTGAVRNHMLENSNVDMTKEMADLMTNQKMIQASQRIMTSFDKIYEKEAN 253

Query: 130 DLLR 133
           ++LR
Sbjct: 254 EILR 257


>gi|323178487|gb|EFZ64065.1| hypothetical protein ECOK1180_3000 [Escherichia coli 1180]
          Length = 226

 Score = 36.0 bits (81), Expect = 1.9,   Method: Composition-based stats.
 Identities = 8/39 (20%), Positives = 20/39 (51%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             V++  E  ++    ++Y ANL+ I    ++  + L++
Sbjct: 186 SGVSMDEEAVNLITYQQIYEANLKVISAGAEIFDSVLEM 224


>gi|229017025|ref|ZP_04173945.1| Flagellar hook-associated protein FlgK [Bacillus cereus AH1273]
 gi|229023207|ref|ZP_04179718.1| Flagellar hook-associated protein FlgK [Bacillus cereus AH1272]
 gi|228738132|gb|EEL88617.1| Flagellar hook-associated protein FlgK [Bacillus cereus AH1272]
 gi|228744296|gb|EEL94378.1| Flagellar hook-associated protein FlgK [Bacillus cereus AH1273]
          Length = 432

 Score = 36.0 bits (81), Expect = 1.9,   Method: Composition-based stats.
 Identities = 7/40 (17%), Positives = 20/40 (50%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            VN+  E  ++    + ++AN + I   +++  +   ++R
Sbjct: 393 GVNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSLFSIIR 432


>gi|258511108|ref|YP_003184542.1| flagellar basal-body rod protein FlgB [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
 gi|257477834|gb|ACV58153.1| flagellar basal-body rod protein FlgB [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
          Length = 134

 Score = 36.0 bits (81), Expect = 1.9,   Method: Composition-based stats.
 Identities = 16/121 (13%), Positives = 34/121 (28%), Gaps = 6/121 (4%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           +    +  + L   + R  + + NIANA T G       +     +             +
Sbjct: 1   MTVFELLQNALDASTLRQAVYANNIANAETPGYKRQDVAFETLLQNALSGQASGALGEAQ 60

Query: 65  KIGVDQST------FVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
                 +         +     +   + +      NV++  E   + E    Y   +Q I
Sbjct: 61  IPIGGDAPSYDLNALPDVTPVVYTDPSTTVNSNGNNVDITEEMVLLAENQVRYDTLVQVI 120

Query: 119 K 119
            
Sbjct: 121 S 121


>gi|224532827|ref|ZP_03673442.1| flagellar hook-associated protein FlgK [Borrelia burgdorferi
          WI91-23]
 gi|224512216|gb|EEF82602.1| flagellar hook-associated protein FlgK [Borrelia burgdorferi
          WI91-23]
          Length = 627

 Score = 36.0 bits (81), Expect = 1.9,   Method: Composition-based stats.
 Identities = 13/80 (16%), Positives = 24/80 (30%), Gaps = 7/80 (8%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDP-------YRRKTISFEE 53
          MD   +   I    L      M  +  N++NA   G +            Y  +    ++
Sbjct: 1  MDSTFSGIEIGKRSLFAHKDAMNTVGHNLSNATKPGYSRQRVTMKTEIPLYAPQLNRAKK 60

Query: 54 VMHGSGGVRVKKIGVDQSTF 73
                G+ V+ I   +   
Sbjct: 61 QGQLGQGIVVQSIDRVKDEL 80


>gi|119469956|ref|ZP_01612761.1| putative flagellar hook-associated protein [Alteromonadales
          bacterium TW-7]
 gi|119446666|gb|EAW27939.1| putative flagellar hook-associated protein [Alteromonadales
          bacterium TW-7]
          Length = 667

 Score = 36.0 bits (81), Expect = 1.9,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 19/40 (47%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
              +IA+SG+   S  +Q  S+NIAN  T G       +
Sbjct: 3  FNLLNIASSGVRANSELLQTTSKNIANVNTEGYVRERTEH 42


>gi|1518046|gb|AAB62740.1| FlgK protein [Borrelia burgdorferi]
          Length = 616

 Score = 36.0 bits (81), Expect = 1.9,   Method: Composition-based stats.
 Identities = 13/80 (16%), Positives = 24/80 (30%), Gaps = 7/80 (8%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDP-------YRRKTISFEE 53
          MD   +   I    L      M  +  N++NA   G +            Y  +    ++
Sbjct: 1  MDSTFSGIEIGKRSLFAHKDAMNTVGHNLSNATKPGYSRQRVTMKTEIPLYAPQLNRAKK 60

Query: 54 VMHGSGGVRVKKIGVDQSTF 73
                G+ V+ I   +   
Sbjct: 61 QGQLGQGIVVQSIDRVKDEL 80


>gi|320664481|gb|EFX31632.1| flagellar hook-associated protein FlgK [Escherichia coli O157:H7
           str. LSU-61]
          Length = 547

 Score = 36.0 bits (81), Expect = 1.9,   Method: Composition-based stats.
 Identities = 15/110 (13%), Positives = 35/110 (31%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           + +  + A SGL    A +   S NI++    G T  +    +   +         GV V
Sbjct: 1   MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGGWVGNGVYV 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
             +  +   F+          ++    +Y  ++ +        ++     
Sbjct: 61  SGVQREYDAFITNQLRAARTQSSGLTARYEQMSKIDNMLSTSTSSLATQM 110


>gi|206975016|ref|ZP_03235931.1| putative flagellar basal-body rod protein [Bacillus cereus
           H3081.97]
 gi|217959255|ref|YP_002337803.1| flagellar basal body rod protein FlgG [Bacillus cereus AH187]
 gi|229138473|ref|ZP_04267062.1| Flagellar basal-body rod protein flgG [Bacillus cereus BDRD-ST26]
 gi|206747035|gb|EDZ58427.1| putative flagellar basal-body rod protein [Bacillus cereus
           H3081.97]
 gi|217066007|gb|ACJ80257.1| putative flagellar basal-body rod protein [Bacillus cereus AH187]
 gi|228645010|gb|EEL01253.1| Flagellar basal-body rod protein flgG [Bacillus cereus BDRD-ST26]
          Length = 257

 Score = 36.0 bits (81), Expect = 1.9,   Method: Composition-based stats.
 Identities = 10/64 (15%), Positives = 25/64 (39%), Gaps = 1/64 (1%)

Query: 71  STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT-TL 129
           +       P       + +++  NV++  E AD+    R+  A+ + +     +      
Sbjct: 194 AEGNIADLPNGTGLVKNHMLENSNVDMTKEMADLMTDQRMISASQRVMTSFDKIYEKEAN 253

Query: 130 DLLR 133
           ++LR
Sbjct: 254 EILR 257


>gi|323976545|gb|EGB71633.1| flagellar hook protein FlgK [Escherichia coli TW10509]
          Length = 547

 Score = 36.0 bits (81), Expect = 2.0,   Method: Composition-based stats.
 Identities = 15/110 (13%), Positives = 35/110 (31%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           + +  + A SGL    A +   S NI++    G T  +    +   +         GV V
Sbjct: 1   MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGGWVGNGVYV 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
             +  +   F+          ++    +Y  ++ +        ++     
Sbjct: 61  SGVQREYDAFITNQLRAAQTQSSGLTARYEQMSKIDNMLSTSTSSLATQM 110


>gi|284920905|emb|CBG33968.1| flagellar hook-associated protein 1 [Escherichia coli 042]
          Length = 547

 Score = 36.0 bits (81), Expect = 2.0,   Method: Composition-based stats.
 Identities = 15/110 (13%), Positives = 35/110 (31%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           + +  + A SGL    A +   S NI++    G T  +    +   +         GV V
Sbjct: 1   MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGTGGWVGNGVYV 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
             +  +   F+          ++    +Y  ++ +        ++     
Sbjct: 61  SGVQREYDAFITNQLRAAQTQSSGLTARYEQMSKIDNMLSTSTSSLATQM 110


>gi|253998482|ref|YP_003050545.1| flagellar hook-associated protein FlgK [Methylovorus sp. SIP3-4]
 gi|253985161|gb|ACT50018.1| flagellar hook-associated protein FlgK [Methylovorus sp. SIP3-4]
          Length = 647

 Score = 36.0 bits (81), Expect = 2.0,   Method: Composition-based stats.
 Identities = 8/39 (20%), Positives = 19/39 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN+  E A++    + Y A  + ++ +  M  T +++
Sbjct: 608 SGVNLDEEAANLLRYQQSYQAAAKVMQIASQMFDTLINI 646



 Score = 35.6 bits (80), Expect = 2.5,   Method: Composition-based stats.
 Identities = 12/103 (11%), Positives = 26/103 (25%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
               +I  S L      + +   NI+NA + G                   +   G +V 
Sbjct: 3   SDILNIGKSALNAAQIGISVTGNNISNASSAGYNRQVISQSAAASQNVGFGYLGKGTQVT 62

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
            I    S  + +        ++        ++ +         
Sbjct: 63  SIERVYSALLAKQVNVSQARSSELSTYSSQISSINNMLADSSA 105


>gi|229029418|ref|ZP_04185501.1| Flagellar hook-associated protein FlgK [Bacillus cereus AH1271]
 gi|228731877|gb|EEL82776.1| Flagellar hook-associated protein FlgK [Bacillus cereus AH1271]
          Length = 432

 Score = 36.0 bits (81), Expect = 2.0,   Method: Composition-based stats.
 Identities = 7/40 (17%), Positives = 20/40 (50%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            VN+  E  ++    + ++AN + I   +++  +   ++R
Sbjct: 393 GVNMEEEMVNLMAFQKYFVANSKAISTMNEVFDSLFSIIR 432



 Score = 34.5 bits (77), Expect = 5.5,   Method: Composition-based stats.
 Identities = 16/91 (17%), Positives = 31/91 (34%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
          +   SG+      +Q   +N++N  T G    +  +     S         G  V+ +GV
Sbjct: 7  NTPLSGMLAAQMGLQTTKQNLSNIHTPGYVRQAVNFGSVGASNGHTPEQRIGYGVQTLGV 66

Query: 69 DQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
          D+ T   +    +   +      Y N  +  
Sbjct: 67 DRITDEVKTKQFNDQLSQLAYYNYKNSVLSR 97


>gi|229132551|ref|ZP_04261400.1| Flagellar hook-associated protein FlgK [Bacillus cereus BDRD-ST196]
 gi|228650897|gb|EEL06883.1| Flagellar hook-associated protein FlgK [Bacillus cereus BDRD-ST196]
          Length = 432

 Score = 36.0 bits (81), Expect = 2.0,   Method: Composition-based stats.
 Identities = 7/40 (17%), Positives = 20/40 (50%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            VN+  E  ++    + ++AN + I   +++  +   ++R
Sbjct: 393 GVNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSLFSIIR 432



 Score = 35.6 bits (80), Expect = 2.6,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 30/91 (32%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
          +   SG+      +Q   +N++N  T G       Y     S         G  V+ +GV
Sbjct: 7  NTPLSGMLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGSVGASNGHTPEQRIGYGVQTLGV 66

Query: 69 DQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
          D+ T   +    +   +      Y N  +  
Sbjct: 67 DRITDEVKTKQFNDQLSQFSYYAYMNSTLSR 97


>gi|229166579|ref|ZP_04294331.1| Flagellar hook-associated protein FlgK [Bacillus cereus AH621]
 gi|228616833|gb|EEK73906.1| Flagellar hook-associated protein FlgK [Bacillus cereus AH621]
          Length = 432

 Score = 36.0 bits (81), Expect = 2.0,   Method: Composition-based stats.
 Identities = 7/40 (17%), Positives = 20/40 (50%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            VN+  E  ++    + ++AN + I   +++  +   ++R
Sbjct: 393 GVNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSLFSIIR 432



 Score = 35.6 bits (80), Expect = 2.6,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 30/91 (32%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
          +   SG+      +Q   +N++N  T G       Y     S         G  V+ +GV
Sbjct: 7  NTPLSGMLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGSVGASNGHTPEQRIGYGVQTLGV 66

Query: 69 DQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
          D+ T   +    +   +      Y N  +  
Sbjct: 67 DRITDEVKTKQFNDQLSQFSYYAYMNSTLSR 97


>gi|227815505|ref|YP_002815514.1| flagellar hook-associated protein FlgK [Bacillus anthracis str. CDC
           684]
 gi|227007204|gb|ACP16947.1| flagellar hook-associated protein FlgK [Bacillus anthracis str. CDC
           684]
          Length = 202

 Score = 36.0 bits (81), Expect = 2.0,   Method: Composition-based stats.
 Identities = 7/40 (17%), Positives = 20/40 (50%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            VN+  E  ++    + ++AN + I   +++  +   ++R
Sbjct: 163 GVNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSLFSIIR 202


>gi|225863597|ref|YP_002748975.1| putative flagellar hook-associated protein [Bacillus cereus
           03BB102]
 gi|225789227|gb|ACO29444.1| putative flagellar hook-associated protein [Bacillus cereus
           03BB102]
          Length = 432

 Score = 36.0 bits (81), Expect = 2.0,   Method: Composition-based stats.
 Identities = 7/40 (17%), Positives = 20/40 (50%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            VN+  E  ++    + ++AN + I   +++  +   ++R
Sbjct: 393 GVNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSLFSIIR 432



 Score = 33.7 bits (75), Expect = 8.0,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 30/91 (32%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
          +   SGL      +Q   +N++N  T G       Y     S         G  V+ +GV
Sbjct: 7  NTPLSGLLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGSAGASQGYSPEQKIGYGVQTLGV 66

Query: 69 DQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
          D+ T   +    +   +      Y N  +  
Sbjct: 67 DRITDEVKTKQFNDQLSQLSYYNYMNSTLSR 97


>gi|195941912|ref|ZP_03087294.1| flagellar hook-associated protein FlgK [Borrelia burgdorferi 80a]
 gi|225549791|ref|ZP_03770755.1| flagellar hook-associated protein FlgK [Borrelia burgdorferi
          118a]
 gi|225369599|gb|EEG99048.1| flagellar hook-associated protein FlgK [Borrelia burgdorferi
          118a]
 gi|312149645|gb|ADQ29716.1| flagellar hook-associated protein FlgK [Borrelia burgdorferi N40]
          Length = 627

 Score = 36.0 bits (81), Expect = 2.0,   Method: Composition-based stats.
 Identities = 13/80 (16%), Positives = 24/80 (30%), Gaps = 7/80 (8%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDP-------YRRKTISFEE 53
          MD   +   I    L      M  +  N++NA   G +            Y  +    ++
Sbjct: 1  MDSTFSGIEIGKRSLFAHKDAMNTVGHNLSNATKPGYSRQRVTMKTEIPLYAPQLNRAKK 60

Query: 54 VMHGSGGVRVKKIGVDQSTF 73
                G+ V+ I   +   
Sbjct: 61 QGQLGQGIVVQSIDRVKDEL 80


>gi|118589984|ref|ZP_01547388.1| flagellar basal-body rod protein B [Stappia aggregata IAM 12614]
 gi|118437481|gb|EAV44118.1| flagellar basal-body rod protein B [Stappia aggregata IAM 12614]
          Length = 126

 Score = 36.0 bits (81), Expect = 2.0,   Method: Composition-based stats.
 Identities = 24/116 (20%), Positives = 38/116 (32%), Gaps = 14/116 (12%)

Query: 19  SARMQIISENIANARTTGD-----TPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTF 73
           S R   I+ENIANA T G       P +    R  ++      G  G  ++         
Sbjct: 18  SVRQATIAENIANANTPGFRSKDLEPFTTVISRTQLAMTATHDGHLGQTMEAARKSDVEK 77

Query: 74  VEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
            + +   H            +V++  E     E  R +  N    K  H M  + +
Sbjct: 78  ADSWTVTHSGN---------SVSLEQELMKAGEVARDHSLNASIAKSFHRMYLSAV 124


>gi|313200557|ref|YP_004039215.1| flagellar hook-associated protein flgk [Methylovorus sp. MP688]
 gi|312439873|gb|ADQ83979.1| flagellar hook-associated protein FlgK [Methylovorus sp. MP688]
          Length = 647

 Score = 36.0 bits (81), Expect = 2.0,   Method: Composition-based stats.
 Identities = 8/39 (20%), Positives = 19/39 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN+  E A++    + Y A  + ++ +  M  T +++
Sbjct: 608 SGVNLDEEAANLLRYQQSYQAAAKVMQIASQMFDTLINI 646



 Score = 35.6 bits (80), Expect = 2.3,   Method: Composition-based stats.
 Identities = 13/103 (12%), Positives = 26/103 (25%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
               +I  S L      + +   NI+NA + G                   +   G +V 
Sbjct: 3   SDILNIGKSALNAAQIGISVTGNNISNASSAGYNRQVISQSAAASQNVGFGYLGKGTQVT 62

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
            I    S  + +        ++        +N +         
Sbjct: 63  SIERVYSALLAKQVNVSQARSSELSTYSSQINSINNMLADSSA 105


>gi|126738583|ref|ZP_01754288.1| flagellar basal-body rod protein; FlgB [Roseobacter sp. SK209-2-6]
 gi|126720382|gb|EBA17088.1| flagellar basal-body rod protein; FlgB [Roseobacter sp. SK209-2-6]
          Length = 129

 Score = 36.0 bits (81), Expect = 2.0,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 43/130 (33%), Gaps = 5/130 (3%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGD-TPGSDPYRRKTISFEEVMHGSG 59
           M   +    IA S       R  ++SENIANA T G       P++    S         
Sbjct: 1   MFTELNVFKIAYSMATHAGKRQALVSENIANADTPGYHAKDIKPFKEIYASGTRPGEMIA 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
                  G   S            ++ +      +V++ +E     E  R +   L   K
Sbjct: 61  SRSNHLNGAVGSDLDWAVSRSKEGSDPNNN----SVSLELEMLKGVEVQRQHKRALAVYK 116

Query: 120 QSHDMMTTTL 129
            S +++  +L
Sbjct: 117 SSMNILRASL 126


>gi|119503645|ref|ZP_01625728.1| hypothetical protein MGP2080_03860 [marine gamma proteobacterium
           HTCC2080]
 gi|119460707|gb|EAW41799.1| hypothetical protein MGP2080_03860 [marine gamma proteobacterium
           HTCC2080]
          Length = 244

 Score = 36.0 bits (81), Expect = 2.0,   Method: Composition-based stats.
 Identities = 12/58 (20%), Positives = 29/58 (50%)

Query: 76  EFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             +P   V  A G ++  NV+ +    +M    R +  ++QTIK + ++  ++  +++
Sbjct: 185 RLEPDANVRVAVGALETSNVSPVGAMVEMITLARSFEQHIQTIKSAEELDASSASIMK 242


>gi|42780864|ref|NP_978111.1| flagellar basal body rod protein FlgG [Bacillus cereus ATCC 10987]
 gi|42736784|gb|AAS40719.1| flagellar basal-body rod protein, putative [Bacillus cereus ATCC
           10987]
          Length = 257

 Score = 36.0 bits (81), Expect = 2.0,   Method: Composition-based stats.
 Identities = 10/64 (15%), Positives = 25/64 (39%), Gaps = 1/64 (1%)

Query: 71  STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT-TL 129
           +       P       + +++  NV++  E AD+    R+  A+ + +     +      
Sbjct: 194 AEGNIADLPNGTGLVKNHMLENSNVDMTKEMADLMTDQRMISASQRVMTSFDKIYEKEAN 253

Query: 130 DLLR 133
           ++LR
Sbjct: 254 EILR 257


>gi|83309713|ref|YP_419977.1| flagellar basal body protein [Magnetospirillum magneticum AMB-1]
 gi|82944554|dbj|BAE49418.1| Flagellar basal body protein [Magnetospirillum magneticum AMB-1]
          Length = 133

 Score = 36.0 bits (81), Expect = 2.0,   Method: Composition-based stats.
 Identities = 28/133 (21%), Positives = 49/133 (36%), Gaps = 9/133 (6%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M   +    +A + +   + R ++++ NIANA     TP   P   K + F+EV+ G+  
Sbjct: 1   MYDDLGIFKMAKAQMDWIAQRQEVLASNIANAN----TPRYLPKDIKPLDFKEVLAGTAQ 56

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP-----NVNVLVETADMRETNRLYMANL 115
             V     +    V E  P    A               V +  + A + + N  Y A  
Sbjct: 57  PDVGATTTNAKHIVPEVTPSPFKAVTQRRTFESTPDGNAVILEEQIAKVGDANSKYNAAA 116

Query: 116 QTIKQSHDMMTTT 128
              ++   M+ T 
Sbjct: 117 ALFQKYQKMIKTA 129


>gi|225548519|ref|ZP_03769567.1| flagellar hook-associated protein FlgK [Borrelia burgdorferi 94a]
 gi|225370782|gb|EEH00217.1| flagellar hook-associated protein FlgK [Borrelia burgdorferi 94a]
          Length = 627

 Score = 36.0 bits (81), Expect = 2.0,   Method: Composition-based stats.
 Identities = 13/80 (16%), Positives = 24/80 (30%), Gaps = 7/80 (8%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDP-------YRRKTISFEE 53
          MD   +   I    L      M  +  N++NA   G +            Y  +    ++
Sbjct: 1  MDSTFSGIEIGKRSLFAHKDAMNTVGHNLSNATKPGYSRQRVTMKTEIPLYAPQLNRAKK 60

Query: 54 VMHGSGGVRVKKIGVDQSTF 73
                G+ V+ I   +   
Sbjct: 61 QGQLGQGIVVQSIDRVKDEL 80


>gi|218249283|ref|YP_002374709.1| flagellar hook-associated protein FlgK [Borrelia burgdorferi ZS7]
 gi|218164471|gb|ACK74532.1| flagellar hook-associated protein FlgK [Borrelia burgdorferi ZS7]
          Length = 627

 Score = 36.0 bits (81), Expect = 2.0,   Method: Composition-based stats.
 Identities = 13/80 (16%), Positives = 24/80 (30%), Gaps = 7/80 (8%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDP-------YRRKTISFEE 53
          MD   +   I    L      M  +  N++NA   G +            Y  +    ++
Sbjct: 1  MDSTFSGIEIGKRSLFAHKDAMNTVGHNLSNATKPGYSRQRVTMKTEIPLYAPQLNRAKK 60

Query: 54 VMHGSGGVRVKKIGVDQSTF 73
                G+ V+ I   +   
Sbjct: 61 QGQLGQGIVVQSIDRVKDEL 80


>gi|163939544|ref|YP_001644428.1| flagellar hook-associated protein FlgK [Bacillus weihenstephanensis
           KBAB4]
 gi|163861741|gb|ABY42800.1| flagellar hook-associated protein FlgK [Bacillus weihenstephanensis
           KBAB4]
          Length = 432

 Score = 36.0 bits (81), Expect = 2.0,   Method: Composition-based stats.
 Identities = 7/40 (17%), Positives = 20/40 (50%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            VN+  E  ++    + ++AN + I   +++  +   ++R
Sbjct: 393 GVNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSLFSIIR 432



 Score = 35.2 bits (79), Expect = 2.7,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 30/91 (32%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
          +   SG+      +Q   +N++N  T G       Y     S         G  V+ +GV
Sbjct: 7  NTPLSGMLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGSVGASNGHTPEQRIGYGVQTLGV 66

Query: 69 DQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
          D+ T   +    +   +      Y N  +  
Sbjct: 67 DRITDEVKTKQFNDQLSQFSYYAYMNSTLSR 97


>gi|229096257|ref|ZP_04227230.1| Flagellar basal-body rod protein flgG [Bacillus cereus Rock3-29]
 gi|229115212|ref|ZP_04244622.1| Flagellar basal-body rod protein flgG [Bacillus cereus Rock1-3]
 gi|228668352|gb|EEL23784.1| Flagellar basal-body rod protein flgG [Bacillus cereus Rock1-3]
 gi|228687217|gb|EEL41122.1| Flagellar basal-body rod protein flgG [Bacillus cereus Rock3-29]
          Length = 267

 Score = 35.6 bits (80), Expect = 2.0,   Method: Composition-based stats.
 Identities = 9/64 (14%), Positives = 26/64 (40%), Gaps = 1/64 (1%)

Query: 71  STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT-TL 129
           +       P       + +++  NV++  E AD+  + ++  A+ + +     +      
Sbjct: 204 AEGNIANLPNGTGIVKNHMLENSNVDMTKEMADLMSSQKMIQASQRIMTSFDKIYEKEAN 263

Query: 130 DLLR 133
           ++LR
Sbjct: 264 EILR 267


>gi|165869539|ref|ZP_02214198.1| putative flagellar basal-body rod protein [Bacillus anthracis str.
           A0488]
 gi|190566290|ref|ZP_03019208.1| putative flagellar basal-body rod protein [Bacillus anthracis
           Tsiankovskii-I]
 gi|218902886|ref|YP_002450720.1| putative flagellar basal-body rod protein [Bacillus cereus AH820]
 gi|227815455|ref|YP_002815464.1| putative flagellar basal-body rod protein [Bacillus anthracis str.
           CDC 684]
 gi|164714979|gb|EDR20497.1| putative flagellar basal-body rod protein [Bacillus anthracis str.
           A0488]
 gi|190562425|gb|EDV16392.1| putative flagellar basal-body rod protein [Bacillus anthracis
           Tsiankovskii-I]
 gi|218539299|gb|ACK91697.1| putative flagellar basal-body rod protein [Bacillus cereus AH820]
 gi|227003269|gb|ACP13012.1| putative flagellar basal-body rod protein [Bacillus anthracis str.
           CDC 684]
          Length = 249

 Score = 35.6 bits (80), Expect = 2.0,   Method: Composition-based stats.
 Identities = 10/64 (15%), Positives = 25/64 (39%), Gaps = 1/64 (1%)

Query: 71  STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT-TL 129
           +       P       + +++  NV++  E AD+    R+  A+ + +     +      
Sbjct: 186 AEGNIADLPNGVGTVKNYMLENSNVDMTKEMADLMTDQRMISASQRVMTSFDKIYEKEAN 245

Query: 130 DLLR 133
           ++LR
Sbjct: 246 EILR 249


>gi|159045787|ref|YP_001534581.1| flagellar basal body rod protein FlgB [Dinoroseobacter shibae DFL
           12]
 gi|157913547|gb|ABV94980.1| flagellar basal-body rod protein FlgB [Dinoroseobacter shibae DFL
           12]
          Length = 126

 Score = 35.6 bits (80), Expect = 2.0,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 40/119 (33%), Gaps = 5/119 (4%)

Query: 12  NSGLAVQSA-RMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQ 70
            S +   +  R  +I+ NIA+A     TPG      K  +       S G+R  +     
Sbjct: 10  ASAMVAHANERHGVIARNIAHAD----TPGYRTQDLKDFTDSYREMTSSGLRATRDDHAF 65

Query: 71  STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
                       V +        +V++  E   M E    +   L   K S  ++ T+L
Sbjct: 66  GAHRGLDLSVQTVLDTPVAPNGNSVSLEHEMIRMAENRHQHELALSVYKTSMSILRTSL 124


>gi|229189870|ref|ZP_04316880.1| Flagellar basal-body rod protein flgG [Bacillus cereus ATCC 10876]
 gi|228593544|gb|EEK51353.1| Flagellar basal-body rod protein flgG [Bacillus cereus ATCC 10876]
          Length = 267

 Score = 35.6 bits (80), Expect = 2.0,   Method: Composition-based stats.
 Identities = 9/64 (14%), Positives = 25/64 (39%), Gaps = 1/64 (1%)

Query: 71  STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT-TL 129
           +       P       + +++  NV++  E AD+    ++  A+ + +     +      
Sbjct: 204 AEGNIANLPNGTGIVKNHMLENSNVDMTKEMADLMTDQKMIQASQRVMTSFDKIYEKEAN 263

Query: 130 DLLR 133
           ++LR
Sbjct: 264 EILR 267


>gi|119384842|ref|YP_915898.1| flagellar basal body rod protein FlgB [Paracoccus denitrificans
           PD1222]
 gi|119374609|gb|ABL70202.1| flagellar basal-body rod protein FlgB [Paracoccus denitrificans
           PD1222]
          Length = 129

 Score = 35.6 bits (80), Expect = 2.0,   Method: Composition-based stats.
 Identities = 23/130 (17%), Positives = 39/130 (30%), Gaps = 6/130 (4%)

Query: 1   MDYLIASAHIANSGLAVQSA-RMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
           M   I +  +A+S L   +  R ++I+ N+ANA T G          +T           
Sbjct: 1   MLDRIDTLRMASS-LTAHAVERQKLIARNVANADTPGFRSRDLAGFAETYRSHGPTGMRA 59

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
                                   A          V++  E        R +  +L   K
Sbjct: 60  SRPGHLTEGRGGDGAGRI----TDAGGEPAPNGNTVSLEEEMFRSAAAKRQFDLSLAVTK 115

Query: 120 QSHDMMTTTL 129
            S  ++ T+L
Sbjct: 116 SSLSLVRTSL 125


>gi|47566121|ref|ZP_00237159.1| flagellar hook-associated protein 1, putative [Bacillus cereus
          G9241]
 gi|47557038|gb|EAL15368.1| flagellar hook-associated protein 1, putative [Bacillus cereus
          G9241]
          Length = 432

 Score = 35.6 bits (80), Expect = 2.0,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 30/91 (32%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
          +   SG+      +Q   +N++N  T G       Y     S         G  V+ +GV
Sbjct: 7  NTPLSGMLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGSVGASNGHTPEQRIGYGVQTLGV 66

Query: 69 DQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
          D+ T   +    +   +      Y N  +  
Sbjct: 67 DRITDEVKTRQFNDQMSQFSYYAYMNSTLSR 97



 Score = 35.6 bits (80), Expect = 2.4,   Method: Composition-based stats.
 Identities = 7/40 (17%), Positives = 20/40 (50%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            VN+  E  ++    + ++AN + I   +++  +   ++R
Sbjct: 393 GVNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSLFSIIR 432


>gi|163758033|ref|ZP_02165121.1| hypothetical protein HPDFL43_00370 [Hoeflea phototrophica DFL-43]
 gi|162284322|gb|EDQ34605.1| hypothetical protein HPDFL43_00370 [Hoeflea phototrophica DFL-43]
          Length = 487

 Score = 35.6 bits (80), Expect = 2.1,   Method: Composition-based stats.
 Identities = 8/48 (16%), Positives = 20/48 (41%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
                    V++  E + + E  + Y A+ + I    +M+   + ++R
Sbjct: 440 EEAYSNDTGVSIDEEMSMLLELEQSYKASARLISAVDEMLQALMSVVR 487


>gi|254723815|ref|ZP_05185601.1| flagellar hook-associated protein FlgK [Bacillus anthracis str.
           A1055]
          Length = 432

 Score = 35.6 bits (80), Expect = 2.1,   Method: Composition-based stats.
 Identities = 7/40 (17%), Positives = 20/40 (50%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            VN+  E  ++    + ++AN + I   +++  +   ++R
Sbjct: 393 GVNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSLFSIIR 432



 Score = 33.7 bits (75), Expect = 8.3,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 30/91 (32%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
          +   SGL      +Q   +N++N  T G       Y     S         G  V+ +GV
Sbjct: 7  NTPLSGLLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGSAGASQGYSPEQKIGYGVQTLGV 66

Query: 69 DQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
          D+ T   +    +   +      Y N  +  
Sbjct: 67 DRITDEVKTKQFNDQLSQLSYYNYMNSTLSR 97


>gi|228964721|ref|ZP_04125828.1| Flagellar hook-associated protein FlgK [Bacillus thuringiensis
           serovar sotto str. T04001]
 gi|228794971|gb|EEM42470.1| Flagellar hook-associated protein FlgK [Bacillus thuringiensis
           serovar sotto str. T04001]
          Length = 139

 Score = 35.6 bits (80), Expect = 2.1,   Method: Composition-based stats.
 Identities = 7/40 (17%), Positives = 20/40 (50%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            VN+  E  ++    + ++AN + I   +++  +   ++R
Sbjct: 100 GVNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSLFSIIR 139


>gi|229058370|ref|ZP_04196754.1| Flagellar hook-associated protein FlgK [Bacillus cereus AH603]
 gi|228719879|gb|EEL71469.1| Flagellar hook-associated protein FlgK [Bacillus cereus AH603]
          Length = 432

 Score = 35.6 bits (80), Expect = 2.1,   Method: Composition-based stats.
 Identities = 7/40 (17%), Positives = 20/40 (50%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            VN+  E  ++    + ++AN + I   +++  +   ++R
Sbjct: 393 GVNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSLFSIIR 432



 Score = 35.2 bits (79), Expect = 2.7,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 30/91 (32%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
          +   SG+      +Q   +N++N  T G       Y     S         G  V+ +GV
Sbjct: 7  NTPLSGMLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGSVGASNGHTPEQRIGYGVQTLGV 66

Query: 69 DQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
          D+ T   +    +   +      Y N  +  
Sbjct: 67 DRITDEVKTKQFNDQLSQFSYYAYMNSTLSR 97


>gi|196045154|ref|ZP_03112387.1| putative flagellar basal-body rod protein [Bacillus cereus 03BB108]
 gi|196024156|gb|EDX62830.1| putative flagellar basal-body rod protein [Bacillus cereus 03BB108]
          Length = 249

 Score = 35.6 bits (80), Expect = 2.1,   Method: Composition-based stats.
 Identities = 10/64 (15%), Positives = 25/64 (39%), Gaps = 1/64 (1%)

Query: 71  STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT-TL 129
           +       P       + +++  NV++  E AD+    R+  A+ + +     +      
Sbjct: 186 AEGNIADLPNGTGLVKNHMLENSNVDMTKEMADLMTDQRMISASQRVMTSFDKIYEKEAN 245

Query: 130 DLLR 133
           ++LR
Sbjct: 246 EILR 249


>gi|23092321|gb|AAN08646.1| FlgK [Aeromonas hydrophila]
          Length = 664

 Score = 35.6 bits (80), Expect = 2.1,   Method: Composition-based stats.
 Identities = 20/91 (21%), Positives = 33/91 (36%), Gaps = 5/91 (5%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
            I  SG+  Q   +Q  S NI N  + G         R  I    V  G+G +  +++ 
Sbjct: 6  LGIGTSGVMAQQRLLQTTSNNIVNVNSQGY-----VRERTLIYTNSVGLGTGDMLTERVI 60

Query: 68 VDQSTFVEEFDPGHPVANASGIVKYPNVNVL 98
             +      D     A+A+   +  N + L
Sbjct: 61 NAYAQGEVRRDTSAYFASATRYEQLSNTDTL 91


>gi|15594526|ref|NP_212315.1| flagellar hook-associated protein FlgK [Borrelia burgdorferi B31]
 gi|216264299|ref|ZP_03436291.1| flagellar hook-associated protein FlgK [Borrelia burgdorferi
          156a]
 gi|221217529|ref|ZP_03588999.1| flagellar hook-associated protein FlgK [Borrelia burgdorferi 72a]
 gi|223889273|ref|ZP_03623861.1| flagellar hook-associated protein FlgK [Borrelia burgdorferi 64b]
 gi|226321499|ref|ZP_03797025.1| flagellar hook-associated protein FlgK [Borrelia burgdorferi
          Bol26]
 gi|3915691|sp|P70859|FLGK_BORBU RecName: Full=Flagellar hook-associated protein 1; Short=HAP1
 gi|2688082|gb|AAC66579.1| flagellar hook-associated protein (flgK) [Borrelia burgdorferi
          B31]
 gi|215980772|gb|EEC21579.1| flagellar hook-associated protein FlgK [Borrelia burgdorferi
          156a]
 gi|221192592|gb|EEE18809.1| flagellar hook-associated protein FlgK [Borrelia burgdorferi 72a]
 gi|223885306|gb|EEF56408.1| flagellar hook-associated protein FlgK [Borrelia burgdorferi 64b]
 gi|226232688|gb|EEH31441.1| flagellar hook-associated protein FlgK [Borrelia burgdorferi
          Bol26]
 gi|312148243|gb|ADQ30902.1| flagellar hook-associated protein FlgK [Borrelia burgdorferi JD1]
          Length = 627

 Score = 35.6 bits (80), Expect = 2.1,   Method: Composition-based stats.
 Identities = 13/80 (16%), Positives = 24/80 (30%), Gaps = 7/80 (8%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDP-------YRRKTISFEE 53
          MD   +   I    L      M  +  N++NA   G +            Y  +    ++
Sbjct: 1  MDSTFSGIEIGKRSLFAHKDAMNTVGHNLSNATKPGYSRQRVTMKTEIPLYAPQLNRAKK 60

Query: 54 VMHGSGGVRVKKIGVDQSTF 73
                G+ V+ I   +   
Sbjct: 61 QGQLGQGIVVQSIDRVKDEL 80


>gi|307718454|ref|YP_003873986.1| flagellar hook-associated protein [Spirochaeta thermophila DSM
           6192]
 gi|306532179|gb|ADN01713.1| flagellar hook-associated protein [Spirochaeta thermophila DSM
           6192]
          Length = 624

 Score = 35.6 bits (80), Expect = 2.1,   Method: Composition-based stats.
 Identities = 9/38 (23%), Positives = 17/38 (44%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             VN+  E A M +    Y A+ + I   + M+   ++
Sbjct: 583 SGVNIDEELAQMIKFQHGYAASARFITTFNSMLDLLIN 620


>gi|296447441|ref|ZP_06889366.1| flagellar basal body rod protein FlgB [Methylosinus trichosporium
           OB3b]
 gi|296255061|gb|EFH02163.1| flagellar basal body rod protein FlgB [Methylosinus trichosporium
           OB3b]
          Length = 127

 Score = 35.6 bits (80), Expect = 2.1,   Method: Composition-based stats.
 Identities = 21/112 (18%), Positives = 39/112 (34%), Gaps = 6/112 (5%)

Query: 19  SARMQIISENIANARTTGDTP-GSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEF 77
           SAR  ++++N+ANA + G       P+ +        M  +  + V+    D      + 
Sbjct: 19  SARQALVAQNVANANSPGYRAVDLAPFTKVLDQSGLQMSETNSLHVQSAAFDPQAASPK- 77

Query: 78  DPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
                       V   +V++  E     E    +  +   +K  H M   TL
Sbjct: 78  ----ERTAWETTVSGNSVSLEQEMIKAGEIRGAFSIDTSILKAFHGMWMATL 125


>gi|225569956|ref|ZP_03778981.1| hypothetical protein CLOHYLEM_06051 [Clostridium hylemonae DSM
           15053]
 gi|225161426|gb|EEG74045.1| hypothetical protein CLOHYLEM_06051 [Clostridium hylemonae DSM
           15053]
          Length = 250

 Score = 35.6 bits (80), Expect = 2.1,   Method: Composition-based stats.
 Identities = 7/41 (17%), Positives = 16/41 (39%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           ++  NV  + E   M    R   ++ Q +K    ++   + 
Sbjct: 205 LESSNVEPVNEMTQMMAGERALQSSAQVLKMYDQIIGKVVT 245



 Score = 34.1 bits (76), Expect = 7.3,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 18/38 (47%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGS 41
          +    +   SG+  Q+ RM +IS N++N  T G     
Sbjct: 1  MFQGFYNLTSGVLTQTRRMNVISNNMSNVSTPGYKRDQ 38


>gi|254504553|ref|ZP_05116704.1| flagellar hook-associated protein FlgK [Labrenzia alexandrii
           DFL-11]
 gi|222440624|gb|EEE47303.1| flagellar hook-associated protein FlgK [Labrenzia alexandrii
           DFL-11]
          Length = 631

 Score = 35.6 bits (80), Expect = 2.1,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 24/45 (53%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             +  +VN+  E A + +    Y AN + ++  +D+M   L+++R
Sbjct: 587 YEESYSVNLDAEMAFLVQLENAYSANARVMQTINDLMQELLNVVR 631


>gi|301053275|ref|YP_003791486.1| flagellar hook-associated protein [Bacillus anthracis CI]
 gi|300375444|gb|ADK04348.1| flagellar hook-associated protein [Bacillus cereus biovar anthracis
           str. CI]
          Length = 432

 Score = 35.6 bits (80), Expect = 2.1,   Method: Composition-based stats.
 Identities = 7/40 (17%), Positives = 20/40 (50%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            VN+  E  ++    + ++AN + I   +++  +   ++R
Sbjct: 393 GVNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSLFSIIR 432



 Score = 33.7 bits (75), Expect = 8.3,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 30/91 (32%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
          +   SGL      +Q   +N++N  T G       Y     S         G  V+ +GV
Sbjct: 7  NTPLSGLLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGSAGASQGYSPEQKIGYGVQTLGV 66

Query: 69 DQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
          D+ T   +    +   +      Y N  +  
Sbjct: 67 DRITDEVKTKQFNDQLSQLSYYNYMNSTLSR 97


>gi|228945375|ref|ZP_04107730.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis
           serovar monterrey BGSC 4AJ1]
 gi|228814347|gb|EEM60613.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis
           serovar monterrey BGSC 4AJ1]
          Length = 257

 Score = 35.6 bits (80), Expect = 2.1,   Method: Composition-based stats.
 Identities = 10/64 (15%), Positives = 25/64 (39%), Gaps = 1/64 (1%)

Query: 71  STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT-TL 129
           +       P       + +++  NV++  E AD+    R+  A+ + +     +      
Sbjct: 194 AEGNIADLPNGTGLVKNHMLENSNVDMTKEMADLMTDQRMISASQRVMTSFDKIYEKEAN 253

Query: 130 DLLR 133
           ++LR
Sbjct: 254 EILR 257


>gi|157693942|ref|YP_001488404.1| flagellar hook-associated protein FlgK [Bacillus pumilus SAFR-032]
 gi|157682700|gb|ABV63844.1| flagellar hook-associated protein 1 [Bacillus pumilus SAFR-032]
          Length = 506

 Score = 35.6 bits (80), Expect = 2.1,   Method: Composition-based stats.
 Identities = 5/38 (13%), Positives = 16/38 (42%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             V++  E  +M +    Y A  + +    +++   ++
Sbjct: 462 SAVSIDEEMTNMIQFQHAYNAAARVVTLQDEILDKVIN 499



 Score = 34.1 bits (76), Expect = 7.1,   Method: Composition-based stats.
 Identities = 14/94 (14%), Positives = 30/94 (31%), Gaps = 2/94 (2%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRK--TISFEEVMHGS 58
          M         A  G+  Q A + + S N++NA T G +     ++ +            +
Sbjct: 1  MGSTFMGLETAKRGITAQRAGLYVTSNNVSNANTDGYSRQRVTFKAENPYPVISVYDGKT 60

Query: 59 GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKY 92
           G     + V     + +        + +  + Y
Sbjct: 61 YGQMGTGVQVGTVERIRDSFLDLQFRDHNNNLSY 94


>gi|58582749|ref|YP_201765.1| hypothetical protein XOO3126 [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|188577538|ref|YP_001914467.1| hypothetical protein PXO_01451 [Xanthomonas oryzae pv. oryzae
           PXO99A]
 gi|58427343|gb|AAW76380.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|188521990|gb|ACD59935.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae
           PXO99A]
          Length = 110

 Score = 35.6 bits (80), Expect = 2.1,   Method: Composition-based stats.
 Identities = 22/128 (17%), Positives = 48/128 (37%), Gaps = 31/128 (24%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           ++ + IA+SG+ V + R Q+ + N+A     G        +R++++     +G     V 
Sbjct: 13  MSISSIASSGMQVAALRQQVAASNVARLPVDGS-------QRQSVAASTQANGGVAANVV 65

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
            +  D S                            +  +       + AN   +++S +M
Sbjct: 66  NVSADPSAP------------------------ATDLVEGVSARNDFQANANVLRRSDEM 101

Query: 125 MTTTLDLL 132
           + + LD+L
Sbjct: 102 LGSLLDVL 109


>gi|315121852|ref|YP_004062341.1| flagellar basal body rod protein FlgF [Candidatus Liberibacter
          solanacearum CLso-ZC1]
 gi|313495254|gb|ADR51853.1| flagellar basal body rod protein FlgF [Candidatus Liberibacter
          solanacearum CLso-ZC1]
          Length = 243

 Score = 35.6 bits (80), Expect = 2.1,   Method: Composition-based stats.
 Identities = 9/33 (27%), Positives = 19/33 (57%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          + +S +I  S       R+  +++NI+N+ T+G
Sbjct: 1  MQSSFNIGLSAQIALEKRLSTVADNISNSNTSG 33


>gi|317152827|ref|YP_004120875.1| flagellar hook-associated protein FlgK [Desulfovibrio aespoeensis
           Aspo-2]
 gi|316943078|gb|ADU62129.1| flagellar hook-associated protein FlgK [Desulfovibrio aespoeensis
           Aspo-2]
          Length = 670

 Score = 35.6 bits (80), Expect = 2.1,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 19/40 (47%)

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
              VNV  E  ++ +  + + A  + +  +  MM T LD+
Sbjct: 630 ASEVNVDEELINLLKYQQAFKAAAEIMTVTRTMMDTVLDI 669


>gi|239826610|ref|YP_002949234.1| flagellar basal body rod protein FlgB [Geobacillus sp. WCH70]
 gi|239806903|gb|ACS23968.1| flagellar basal-body rod protein FlgB [Geobacillus sp. WCH70]
          Length = 130

 Score = 35.6 bits (80), Expect = 2.1,   Method: Composition-based stats.
 Identities = 19/119 (15%), Positives = 35/119 (29%), Gaps = 3/119 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M     +  +   GL   S R ++I+ NIAN  T         +  +      +      
Sbjct: 1   MSLFSRTFMMLEQGLDYASLREKVIANNIANVDTPNYKAKEVRF--RAELDRALQPLEAK 58

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
               K          +F                NV++  E + + E    Y A ++ + 
Sbjct: 59  RTNPKHLPFTRPMTNKFLVTSRTNVVYNH-NGNNVDIDQEMSYLAENQIYYNALVEQLN 116


>gi|228926774|ref|ZP_04089842.1| Flagellar hook-associated protein FlgK [Bacillus thuringiensis
           serovar pondicheriensis BGSC 4BA1]
 gi|228832887|gb|EEM78456.1| Flagellar hook-associated protein FlgK [Bacillus thuringiensis
           serovar pondicheriensis BGSC 4BA1]
          Length = 432

 Score = 35.6 bits (80), Expect = 2.2,   Method: Composition-based stats.
 Identities = 7/40 (17%), Positives = 20/40 (50%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            VN+  E  ++    + ++AN + I   +++  +   ++R
Sbjct: 393 GVNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSLFSIIR 432



 Score = 33.7 bits (75), Expect = 8.5,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 30/91 (32%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
          +   SGL      +Q   +N++N  T G       Y     S         G  V+ +GV
Sbjct: 7  NTPLSGLLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGSAGASQGYSPEQKIGYGVQTLGV 66

Query: 69 DQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
          D+ T   +    +   +      Y N  +  
Sbjct: 67 DRITDEVKTKQFNDQLSQLSYYNYMNSTLSR 97


>gi|228926808|ref|ZP_04089876.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis
           serovar pondicheriensis BGSC 4BA1]
 gi|229090737|ref|ZP_04221970.1| Flagellar basal-body rod protein flgG [Bacillus cereus Rock3-42]
 gi|228692679|gb|EEL46405.1| Flagellar basal-body rod protein flgG [Bacillus cereus Rock3-42]
 gi|228832921|gb|EEM78490.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis
           serovar pondicheriensis BGSC 4BA1]
          Length = 249

 Score = 35.6 bits (80), Expect = 2.2,   Method: Composition-based stats.
 Identities = 10/64 (15%), Positives = 25/64 (39%), Gaps = 1/64 (1%)

Query: 71  STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT-TL 129
           +       P       + +++  NV++  E AD+    R+  A+ + +     +      
Sbjct: 186 AEGNIADLPNGTGLVKNHMLENSNVDMTKEMADLMTDQRMISASQRVMTSFDKIYEKEAN 245

Query: 130 DLLR 133
           ++LR
Sbjct: 246 EILR 249


>gi|229121290|ref|ZP_04250521.1| Flagellar hook-associated protein FlgK [Bacillus cereus 95/8201]
 gi|228662135|gb|EEL17744.1| Flagellar hook-associated protein FlgK [Bacillus cereus 95/8201]
          Length = 432

 Score = 35.6 bits (80), Expect = 2.2,   Method: Composition-based stats.
 Identities = 7/40 (17%), Positives = 20/40 (50%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            VN+  E  ++    + ++AN + I   +++  +   ++R
Sbjct: 393 GVNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSLFSIIR 432



 Score = 33.7 bits (75), Expect = 8.5,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 30/91 (32%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
          +   SGL      +Q   +N++N  T G       Y     S         G  V+ +GV
Sbjct: 7  NTPLSGLLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGSAGASQGYSPEQKIGYGVQTLGV 66

Query: 69 DQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
          D+ T   +    +   +      Y N  +  
Sbjct: 67 DRITDEVKTKQFNDQLSQLSYYNYMNSTLSR 97


>gi|196045090|ref|ZP_03112323.1| putative flagellar hook-associated protein [Bacillus cereus
           03BB108]
 gi|228945341|ref|ZP_04107696.1| Flagellar hook-associated protein FlgK [Bacillus thuringiensis
           serovar monterrey BGSC 4AJ1]
 gi|196024092|gb|EDX62766.1| putative flagellar hook-associated protein [Bacillus cereus
           03BB108]
 gi|228814313|gb|EEM60579.1| Flagellar hook-associated protein FlgK [Bacillus thuringiensis
           serovar monterrey BGSC 4AJ1]
          Length = 432

 Score = 35.6 bits (80), Expect = 2.2,   Method: Composition-based stats.
 Identities = 7/40 (17%), Positives = 20/40 (50%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            VN+  E  ++    + ++AN + I   +++  +   ++R
Sbjct: 393 GVNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSLFSIIR 432



 Score = 33.7 bits (75), Expect = 8.7,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 30/91 (32%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
          +   SGL      +Q   +N++N  T G       Y     S         G  V+ +GV
Sbjct: 7  NTPLSGLLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGSAGASQGYSPEQKIGYGVQTLGV 66

Query: 69 DQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
          D+ T   +    +   +      Y N  +  
Sbjct: 67 DRITDEVKTKQFNDQLSQLSYYNYMNSTLSR 97


>gi|300954378|ref|ZP_07166832.1| flagellar hook-associated protein FlgK [Escherichia coli MS 175-1]
 gi|301029703|ref|ZP_07192757.1| flagellar hook-associated protein FlgK [Escherichia coli MS 196-1]
 gi|299877391|gb|EFI85602.1| flagellar hook-associated protein FlgK [Escherichia coli MS 196-1]
 gi|300318614|gb|EFJ68398.1| flagellar hook-associated protein FlgK [Escherichia coli MS 175-1]
 gi|323942551|gb|EGB38718.1| flagellar hook protein FlgK [Escherichia coli E482]
          Length = 547

 Score = 35.6 bits (80), Expect = 2.2,   Method: Composition-based stats.
 Identities = 15/110 (13%), Positives = 35/110 (31%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           + +  + A SGL    A +   S NI++    G T  +    +   +         GV V
Sbjct: 1   MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMEQANSTLGAGGWVGNGVYV 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
             +  +   F+          ++    +Y  ++ +        ++     
Sbjct: 61  SGVQREYDAFITNQLRAAQTQSSGLTARYEQMSKIDNMLSTSTSSLATQM 110


>gi|218902853|ref|YP_002450687.1| putative flagellar hook-associated protein [Bacillus cereus AH820]
 gi|218537195|gb|ACK89593.1| putative flagellar hook-associated protein [Bacillus cereus AH820]
          Length = 432

 Score = 35.6 bits (80), Expect = 2.2,   Method: Composition-based stats.
 Identities = 7/40 (17%), Positives = 20/40 (50%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            VN+  E  ++    + ++AN + I   +++  +   ++R
Sbjct: 393 GVNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSLFSIIR 432



 Score = 33.7 bits (75), Expect = 8.8,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 30/91 (32%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
          +   SGL      +Q   +N++N  T G       Y     S         G  V+ +GV
Sbjct: 7  NTPLSGLLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGSAGASQGYSPEQKIGYGVQTLGV 66

Query: 69 DQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
          D+ T   +    +   +      Y N  +  
Sbjct: 67 DRITDEVKTKQFNDQLSQLSYYNYMNSTLSR 97


>gi|289523577|ref|ZP_06440431.1| flagellar basal-body rod protein FlgB [Anaerobaculum
           hydrogeniformans ATCC BAA-1850]
 gi|289503269|gb|EFD24433.1| flagellar basal-body rod protein FlgB [Anaerobaculum
           hydrogeniformans ATCC BAA-1850]
          Length = 135

 Score = 35.6 bits (80), Expect = 2.2,   Method: Composition-based stats.
 Identities = 18/110 (16%), Positives = 31/110 (28%), Gaps = 4/110 (3%)

Query: 14  GLAVQSARMQIISENIANARTTGDTPGSDPY----RRKTISFEEVMHGSGGVRVKKIGVD 69
           G+   S R + IS+N+AN  T G       +    R      +             I   
Sbjct: 12  GMKGLSKRFEAISQNVANTNTPGYARSEVTFEDELREALSVSKRPKLPLATTHEAHITNL 71

Query: 70  QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
                      H V           V++ +E + + +    Y A    + 
Sbjct: 72  PRDIKGITPKEHRVVGELARWDGNGVDLDIEMSKLAQARMTYTALASLMS 121


>gi|253575863|ref|ZP_04853197.1| flagellar hook-associated protein FlgK [Paenibacillus sp. oral
           taxon 786 str. D14]
 gi|251844657|gb|EES72671.1| flagellar hook-associated protein FlgK [Paenibacillus sp. oral
           taxon 786 str. D14]
          Length = 523

 Score = 35.6 bits (80), Expect = 2.2,   Method: Composition-based stats.
 Identities = 18/110 (16%), Positives = 34/110 (30%), Gaps = 3/110 (2%)

Query: 27  ENIANA-RTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK-KIGVDQSTFVEEFDPGHPVA 84
            +IANA     D     P    ++S          +     I    +    E +      
Sbjct: 411 SDIANAIAGLRDAIFKFPDALTSLSEGTTDDYFRALTADLGIRASNTERNYENERTMTDN 470

Query: 85  NASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD-LLR 133
                     V++  E ADM    + Y A  + +    +M+   ++ + R
Sbjct: 471 LQILRQSVSGVSMDEELADMIRFQQAYNAAARNMTVVDEMLDRVINSMGR 520


>gi|206890142|ref|YP_002249849.1| flagellar hook basal-body protein FlgG [Thermodesulfovibrio
           yellowstonii DSM 11347]
 gi|206742080|gb|ACI21137.1| flagellar hook basal-body protein FlgG [Thermodesulfovibrio
           yellowstonii DSM 11347]
          Length = 239

 Score = 35.6 bits (80), Expect = 2.2,   Method: Composition-based stats.
 Identities = 11/91 (12%), Positives = 26/91 (28%), Gaps = 10/91 (10%)

Query: 40  GSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
             +P  R  +     +   G    + +   Q+                G ++  NVN + 
Sbjct: 154 DGNPIGRIKLVKLNNLRHVGQSLYEGVEAGQANGQI----------LQGWIENSNVNPMS 203

Query: 100 ETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           E   M +  R +    +      ++    + 
Sbjct: 204 EMVQMIQAIRNFDFTQRVTTNFSELAQRAVS 234


>gi|104782836|ref|YP_609334.1| flagellar hook-associated protein FlgK [Pseudomonas entomophila
          L48]
 gi|95111823|emb|CAK16547.1| flagellar hook-associated protein FlgK [Pseudomonas entomophila
          L48]
          Length = 681

 Score = 35.6 bits (80), Expect = 2.2,   Method: Composition-based stats.
 Identities = 17/96 (17%), Positives = 31/96 (32%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          + +  +I  SGL    + M  +  NIANA     +      + K       +    G  +
Sbjct: 1  MASLINIGMSGLGAAQSGMYTLGNNIANADVESYSRQQIVQKTKGSQQVGQVFIGTGTTL 60

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
            +    ++F+E         +A        V  L 
Sbjct: 61 ADVRRVYNSFLENQLRTTTSLSADASSYLDQVAPLD 96


>gi|49477285|ref|YP_035858.1| flagellar hook-associated protein FlgK [Bacillus thuringiensis
           serovar konkukian str. 97-27]
 gi|118477174|ref|YP_894325.1| flagellar hook-associated protein FlgK [Bacillus thuringiensis str.
           Al Hakam]
 gi|196033487|ref|ZP_03100899.1| putative flagellar hook-associated protein [Bacillus cereus W]
 gi|196038896|ref|ZP_03106203.1| putative flagellar hook-associated protein [Bacillus cereus
           NVH0597-99]
 gi|229090699|ref|ZP_04221932.1| Flagellar hook-associated protein FlgK [Bacillus cereus Rock3-42]
 gi|300117343|ref|ZP_07055133.1| flagellar hook-associated protein FlgK [Bacillus cereus SJ1]
 gi|49328841|gb|AAT59487.1| flagellar hook-associated protein 1 [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|118416399|gb|ABK84818.1| flagellar hook-associated protein 1 [Bacillus thuringiensis str. Al
           Hakam]
 gi|195993921|gb|EDX57877.1| putative flagellar hook-associated protein [Bacillus cereus W]
 gi|196030041|gb|EDX68641.1| putative flagellar hook-associated protein [Bacillus cereus
           NVH0597-99]
 gi|228692641|gb|EEL46367.1| Flagellar hook-associated protein FlgK [Bacillus cereus Rock3-42]
 gi|298725178|gb|EFI65830.1| flagellar hook-associated protein FlgK [Bacillus cereus SJ1]
          Length = 432

 Score = 35.6 bits (80), Expect = 2.2,   Method: Composition-based stats.
 Identities = 7/40 (17%), Positives = 20/40 (50%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            VN+  E  ++    + ++AN + I   +++  +   ++R
Sbjct: 393 GVNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSLFSIIR 432



 Score = 33.7 bits (75), Expect = 9.2,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 30/91 (32%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
          +   SGL      +Q   +N++N  T G       Y     S         G  V+ +GV
Sbjct: 7  NTPLSGLLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGSAGASQGYSPEQKIGYGVQTLGV 66

Query: 69 DQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
          D+ T   +    +   +      Y N  +  
Sbjct: 67 DRITDEVKTKQFNDQLSQLSYYNYMNSTLSR 97


>gi|17989452|ref|NP_542085.1| flagellar basal-body rod protein FLGF [Brucella melitensis bv. 1
          str. 16M]
 gi|256043051|ref|ZP_05445996.1| flagellar basal body rod protein FlgF [Brucella melitensis bv. 1
          str. Rev.1]
 gi|260564283|ref|ZP_05834768.1| flagellar basal body rod protein [Brucella melitensis bv. 1 str.
          16M]
 gi|265989489|ref|ZP_06102046.1| flagellar basal body rod protein FlgF [Brucella melitensis bv. 1
          str. Rev.1]
 gi|17985331|gb|AAL54349.1| flagellar basal-body rod protein flgf [Brucella melitensis bv. 1
          str. 16M]
 gi|260151926|gb|EEW87019.1| flagellar basal body rod protein [Brucella melitensis bv. 1 str.
          16M]
 gi|263000158|gb|EEZ12848.1| flagellar basal body rod protein FlgF [Brucella melitensis bv. 1
          str. Rev.1]
          Length = 173

 Score = 35.6 bits (80), Expect = 2.2,   Method: Composition-based stats.
 Identities = 14/88 (15%), Positives = 25/88 (28%)

Query: 6  ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
           S ++  S L     RM  I+ N+ANA T G       +                     
Sbjct: 4  NSIYVGLSSLITLERRMDAIAHNVANASTVGFRGEGTKFDTIVSDKASDDVSFATAGKSY 63

Query: 66 IGVDQSTFVEEFDPGHPVANASGIVKYP 93
          I  +    ++  +P          + + 
Sbjct: 64 IRTEAGPLIKTDNPLDVAVKGDAWMSFS 91


>gi|30261738|ref|NP_844115.1| flagellar hook-associated protein FlgK [Bacillus anthracis str.
           Ames]
 gi|47526956|ref|YP_018305.1| flagellar hook-associated protein FlgK [Bacillus anthracis str.
           'Ames Ancestor']
 gi|49184566|ref|YP_027818.1| flagellar hook-associated protein FlgK [Bacillus anthracis str.
           Sterne]
 gi|65319005|ref|ZP_00391964.1| COG1256: Flagellar hook-associated protein [Bacillus anthracis str.
           A2012]
 gi|167633324|ref|ZP_02391649.1| putative flagellar hook-associated protein [Bacillus anthracis str.
           A0442]
 gi|167639070|ref|ZP_02397343.1| putative flagellar hook-associated protein [Bacillus anthracis str.
           A0193]
 gi|170686189|ref|ZP_02877411.1| putative flagellar hook-associated protein [Bacillus anthracis str.
           A0465]
 gi|170706527|ref|ZP_02896987.1| putative flagellar hook-associated protein [Bacillus anthracis str.
           A0389]
 gi|177650561|ref|ZP_02933528.1| putative flagellar hook-associated protein [Bacillus anthracis str.
           A0174]
 gi|190566328|ref|ZP_03019246.1| putative flagellar hook-associated protein [Bacillus anthracis
           Tsiankovskii-I]
 gi|229601207|ref|YP_002866138.1| putative flagellar hook-associated protein [Bacillus anthracis str.
           A0248]
 gi|254683226|ref|ZP_05147087.1| flagellar hook-associated protein FlgK [Bacillus anthracis str.
           CNEVA-9066]
 gi|254734579|ref|ZP_05192291.1| flagellar hook-associated protein FlgK [Bacillus anthracis str.
           Western North America USA6153]
 gi|254740987|ref|ZP_05198675.1| flagellar hook-associated protein FlgK [Bacillus anthracis str.
           Kruger B]
 gi|254759766|ref|ZP_05211790.1| flagellar hook-associated protein FlgK [Bacillus anthracis str.
           Australia 94]
 gi|30255966|gb|AAP25601.1| putative flagellar hook-associated protein [Bacillus anthracis str.
           Ames]
 gi|47502104|gb|AAT30780.1| putative flagellar hook-associated protein [Bacillus anthracis str.
           'Ames Ancestor']
 gi|49178493|gb|AAT53869.1| flagellar hook-associated protein, putative [Bacillus anthracis
           str. Sterne]
 gi|167512860|gb|EDR88233.1| putative flagellar hook-associated protein [Bacillus anthracis str.
           A0193]
 gi|167531362|gb|EDR94040.1| putative flagellar hook-associated protein [Bacillus anthracis str.
           A0442]
 gi|170128625|gb|EDS97492.1| putative flagellar hook-associated protein [Bacillus anthracis str.
           A0389]
 gi|170669886|gb|EDT20627.1| putative flagellar hook-associated protein [Bacillus anthracis str.
           A0465]
 gi|172083705|gb|EDT68765.1| putative flagellar hook-associated protein [Bacillus anthracis str.
           A0174]
 gi|190562463|gb|EDV16430.1| putative flagellar hook-associated protein [Bacillus anthracis
           Tsiankovskii-I]
 gi|229265615|gb|ACQ47252.1| putative flagellar hook-associated protein [Bacillus anthracis str.
           A0248]
          Length = 432

 Score = 35.6 bits (80), Expect = 2.2,   Method: Composition-based stats.
 Identities = 7/40 (17%), Positives = 20/40 (50%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            VN+  E  ++    + ++AN + I   +++  +   ++R
Sbjct: 393 GVNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSLFSIIR 432



 Score = 33.7 bits (75), Expect = 9.0,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 30/91 (32%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
          +   SGL      +Q   +N++N  T G       Y     S         G  V+ +GV
Sbjct: 7  NTPLSGLLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGSAGASQGYSPEQKIGYGVQTLGV 66

Query: 69 DQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
          D+ T   +    +   +      Y N  +  
Sbjct: 67 DRITDEVKTKQFNDQLSQLSYYNYMNSTLSR 97


>gi|126668564|ref|ZP_01739518.1| flagellar hook-associated protein [Marinobacter sp. ELB17]
 gi|126626969|gb|EAZ97612.1| flagellar hook-associated protein [Marinobacter sp. ELB17]
          Length = 668

 Score = 35.6 bits (80), Expect = 2.2,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 25/70 (35%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +     I  SG+    A +   + NI NA T G +     +  +T           GV V
Sbjct: 1  MAGLLGIGLSGILGSQAALNTTANNITNANTPGYSRQDVQFGAQTPQRTGAGSIGTGVNV 60

Query: 64 KKIGVDQSTF 73
          + I    + +
Sbjct: 61 ENIRRLANEY 70


>gi|52143720|ref|YP_083109.1| flagellar hook-associated protein FlgK [Bacillus cereus E33L]
 gi|51977189|gb|AAU18739.1| flagellar hook-associated protein 1 [Bacillus cereus E33L]
          Length = 432

 Score = 35.6 bits (80), Expect = 2.2,   Method: Composition-based stats.
 Identities = 7/40 (17%), Positives = 20/40 (50%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            VN+  E  ++    + ++AN + I   +++  +   ++R
Sbjct: 393 GVNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSLFSIIR 432



 Score = 33.7 bits (75), Expect = 9.3,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 30/91 (32%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
          +   SGL      +Q   +N++N  T G       Y     S         G  V+ +GV
Sbjct: 7  NTPLSGLLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGSAGASQGYSPEQKIGYGVQTLGV 66

Query: 69 DQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
          D+ T   +    +   +      Y N  +  
Sbjct: 67 DRITDEVKTKQFNDQLSQLSYYNYMNSTLSR 97


>gi|291277389|ref|YP_003517161.1| putative flagellar basal-body rod protein [Helicobacter mustelae
           12198]
 gi|290964583|emb|CBG40436.1| putative flagellar basal-body rod protein [Helicobacter mustelae
           12198]
          Length = 289

 Score = 35.6 bits (80), Expect = 2.3,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 24/56 (42%), Gaps = 1/56 (1%)

Query: 76  EFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS-HDMMTTTLD 130
             +     +     ++  NVN ++E  ++ ETNRL     + +K    D+ T  + 
Sbjct: 228 RQNLATTESVRQSFLEKSNVNAVIEMTNLIETNRLVDMYSKVLKTHMDDLNTEAIS 283


>gi|316936123|ref|YP_004111105.1| flagellar hook-basal body protein [Rhodopseudomonas palustris
          DX-1]
 gi|315603837|gb|ADU46372.1| flagellar hook-basal body protein [Rhodopseudomonas palustris
          DX-1]
          Length = 422

 Score = 35.6 bits (80), Expect = 2.3,   Method: Composition-based stats.
 Identities = 17/59 (28%), Positives = 26/59 (44%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
            L  +   A S L  QS  + +IS+NIAN++T G    S  + +   +       S G
Sbjct: 1  MSLTGALSSAISALNAQSQSLAMISDNIANSQTVGYKTTSASFSQLVTAASGASTYSSG 59



 Score = 35.2 bits (79), Expect = 2.9,   Method: Composition-based stats.
 Identities = 18/133 (13%), Positives = 41/133 (30%), Gaps = 2/133 (1%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG--G 60
             +    I + G+A        I ++   + T  +   +  Y+    +F           
Sbjct: 290 PAVDLTSIESDGMAYGKLSSIAIGDDGTVSATYSNGKTTTIYKVPVATFAAADQLEAKDN 349

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
                     +  V+        +   G+++    +   E + M    + Y A  Q I  
Sbjct: 350 GMYAATLASGTAVVQLSGTNGAGSIEGGVLEASTSDTNTEFSSMISAQQAYSAASQVISA 409

Query: 121 SHDMMTTTLDLLR 133
            ++M  T +  +R
Sbjct: 410 VNEMYDTLISAIR 422


>gi|228920449|ref|ZP_04083794.1| Flagellar hook-associated protein FlgK [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
 gi|228839079|gb|EEM84375.1| Flagellar hook-associated protein FlgK [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
          Length = 432

 Score = 35.6 bits (80), Expect = 2.3,   Method: Composition-based stats.
 Identities = 7/40 (17%), Positives = 20/40 (50%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            VN+  E  ++    + ++AN + I   +++  +   ++R
Sbjct: 393 GVNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSLFSIIR 432



 Score = 34.5 bits (77), Expect = 5.0,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 30/91 (32%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
          +   SG+      +Q   +N++N  T G       Y     S         G  V+ +GV
Sbjct: 7  NTPLSGMLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGSVGASNGHTPEQRIGYGVQTLGV 66

Query: 69 DQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
          D+ T   +    +   +      Y N  +  
Sbjct: 67 DRITDEVKTKQFNDQLSQLSYYNYMNSTLSR 97


>gi|196247642|ref|ZP_03146344.1| flagellar basal-body rod protein FlgB [Geobacillus sp. G11MC16]
 gi|196212426|gb|EDY07183.1| flagellar basal-body rod protein FlgB [Geobacillus sp. G11MC16]
          Length = 129

 Score = 35.6 bits (80), Expect = 2.3,   Method: Composition-based stats.
 Identities = 26/122 (21%), Positives = 47/122 (38%), Gaps = 10/122 (8%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M    ++ H    GL   S R Q I++NIAN  T G       Y+ K + F+  ++ +  
Sbjct: 1   MSLFSSTIHWIEQGLRYASLRQQAIADNIANVDTPG-------YKAKDVRFQAELNRALQ 53

Query: 61  VRVKKIGVDQSTFVEEFD--PGHPVANASGIVKYPN-VNVLVETADMRETNRLYMANLQT 117
           +  K+   +   F  E +                 N V++  E + + E    Y A ++ 
Sbjct: 54  LEAKRTNPNHFPFRSEQNGKIIVTANANISYNHNSNSVDIDQEMSKLAENQIYYNALIEQ 113

Query: 118 IK 119
           + 
Sbjct: 114 LN 115


>gi|315186992|gb|EFU20749.1| flagellar hook-associated protein FlgK [Spirochaeta thermophila DSM
           6578]
          Length = 624

 Score = 35.6 bits (80), Expect = 2.3,   Method: Composition-based stats.
 Identities = 9/38 (23%), Positives = 17/38 (44%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             VN+  E A M +    Y A+ + I   + M+   ++
Sbjct: 583 SGVNIDEELAQMIKFQHGYAASARFISTFNSMLDLLIN 620


>gi|313682109|ref|YP_004059847.1| flagellar hook-basal body protein [Sulfuricurvum kujiense DSM
          16994]
 gi|313154969|gb|ADR33647.1| flagellar hook-basal body protein [Sulfuricurvum kujiense DSM
          16994]
          Length = 270

 Score = 35.6 bits (80), Expect = 2.3,   Method: Composition-based stats.
 Identities = 12/38 (31%), Positives = 17/38 (44%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGS 41
          +    + A  G+  Q  RM  I+ N+ANA T G     
Sbjct: 1  MQTGYYAATGGMVAQFNRMDTIASNLANANTAGYKRDQ 38


>gi|228920482|ref|ZP_04083827.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
 gi|228839112|gb|EEM84408.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
          Length = 249

 Score = 35.6 bits (80), Expect = 2.3,   Method: Composition-based stats.
 Identities = 9/64 (14%), Positives = 25/64 (39%), Gaps = 1/64 (1%)

Query: 71  STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT-TL 129
           +       P       + +++  NV++  E AD+    ++  A+ + +     +      
Sbjct: 186 AEGNIANLPNGTGIVKNHMLENSNVDMTKEMADLMTDQKMIQASQRVMTSFDKIYEKEAN 245

Query: 130 DLLR 133
           ++LR
Sbjct: 246 EILR 249


>gi|170680262|ref|YP_001742379.1| lateral flagellar hook associated protein 1 [Escherichia coli
           SMS-3-5]
 gi|170517980|gb|ACB16158.1| lateral flagellar hook associated protein 1 [Escherichia coli
           SMS-3-5]
          Length = 458

 Score = 35.6 bits (80), Expect = 2.3,   Method: Composition-based stats.
 Identities = 8/39 (20%), Positives = 20/39 (51%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             V++  E  ++    ++Y ANL+ I    ++  + L++
Sbjct: 418 SGVSMDEEAVNLITYQQIYEANLKVISAGAEIFDSVLEM 456


>gi|148258439|ref|YP_001243024.1| putative flagellar hook-associated protein [Bradyrhizobium sp.
           BTAi1]
 gi|146410612|gb|ABQ39118.1| putative flagellar hook-associated protein [Bradyrhizobium sp.
           BTAi1]
          Length = 599

 Score = 35.6 bits (80), Expect = 2.3,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 18/42 (42%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             K  +VN+  E + +      Y AN + +  + +M+   L 
Sbjct: 557 FSKGASVNIDEEMSRLIALQTAYAANARVLTAAREMIDLLLR 598


>gi|301023269|ref|ZP_07187066.1| flagellar hook-associated protein FlgK [Escherichia coli MS 69-1]
 gi|300397114|gb|EFJ80652.1| flagellar hook-associated protein FlgK [Escherichia coli MS 69-1]
          Length = 547

 Score = 35.6 bits (80), Expect = 2.3,   Method: Composition-based stats.
 Identities = 15/110 (13%), Positives = 35/110 (31%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           + +  + A SGL    A +   S NI++    G T  +    +   +         GV V
Sbjct: 1   MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMTQANSTLGAGGWVGNGVYV 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
             +  +   F+          ++    +Y  ++ +        ++     
Sbjct: 61  SGVQREYDAFITNQLRAAQTQSSGLTARYEQMSKIDNMLSTSTSSLATQM 110


>gi|294084412|ref|YP_003551170.1| flgK flagellar hook-associated protein 1 [Candidatus
           Puniceispirillum marinum IMCC1322]
 gi|292663985|gb|ADE39086.1| FlgK flagellar hook-associated protein 1 [Candidatus
           Puniceispirillum marinum IMCC1322]
          Length = 1402

 Score = 35.6 bits (80), Expect = 2.3,   Method: Composition-based stats.
 Identities = 19/100 (19%), Positives = 29/100 (29%), Gaps = 4/100 (4%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV----MHGSG 59
           + +   I  SGL+     + +  +NIAN  T G             S   V         
Sbjct: 1   MASLFDIGKSGLSSYRQALAVTGQNIANINTDGYKRREANLEEIQGSTGSVNSVPDQSGL 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
           GVRV  +      F+                   N++ L 
Sbjct: 61  GVRVTDVRRSFDEFLLNKARATSSYAEGAEAYSSNISNLE 100


>gi|118477204|ref|YP_894355.1| flagellar basal body rod protein FlgG [Bacillus thuringiensis str.
           Al Hakam]
 gi|225863630|ref|YP_002749008.1| putative flagellar basal-body rod protein [Bacillus cereus 03BB102]
 gi|229183964|ref|ZP_04311179.1| Flagellar basal-body rod protein flgG [Bacillus cereus BGSC 6E1]
 gi|118416429|gb|ABK84848.1| flagellar basal-body rod protein [Bacillus thuringiensis str. Al
           Hakam]
 gi|225789416|gb|ACO29633.1| putative flagellar basal-body rod protein [Bacillus cereus 03BB102]
 gi|228599489|gb|EEK57094.1| Flagellar basal-body rod protein flgG [Bacillus cereus BGSC 6E1]
          Length = 257

 Score = 35.6 bits (80), Expect = 2.3,   Method: Composition-based stats.
 Identities = 10/64 (15%), Positives = 25/64 (39%), Gaps = 1/64 (1%)

Query: 71  STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT-TL 129
           +       P       + +++  NV++  E AD+    R+  A+ + +     +      
Sbjct: 194 AEGNIADLPNGTGLVKNHMLENSNVDMTKEMADLMTDQRMISASQRVMTSFDKIYEKEAN 253

Query: 130 DLLR 133
           ++LR
Sbjct: 254 EILR 257


>gi|114765248|ref|ZP_01444380.1| flagellar hook-associated protein K [Pelagibaca bermudensis
          HTCC2601]
 gi|114542383|gb|EAU45411.1| flagellar hook-associated protein K [Roseovarius sp. HTCC2601]
          Length = 470

 Score = 35.6 bits (80), Expect = 2.3,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 18/41 (43%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSD 42
            LI + + A SG++  S   + +S NIANA          
Sbjct: 1  MSLITALNAARSGMSTSSRWAETVSTNIANANNASYARRET 41


>gi|229096224|ref|ZP_04227197.1| Flagellar hook-associated protein FlgK [Bacillus cereus Rock3-29]
 gi|229102337|ref|ZP_04233045.1| Flagellar hook-associated protein FlgK [Bacillus cereus Rock3-28]
 gi|229115179|ref|ZP_04244589.1| Flagellar hook-associated protein FlgK [Bacillus cereus Rock1-3]
 gi|228668319|gb|EEL23751.1| Flagellar hook-associated protein FlgK [Bacillus cereus Rock1-3]
 gi|228680984|gb|EEL35153.1| Flagellar hook-associated protein FlgK [Bacillus cereus Rock3-28]
 gi|228687184|gb|EEL41089.1| Flagellar hook-associated protein FlgK [Bacillus cereus Rock3-29]
          Length = 432

 Score = 35.6 bits (80), Expect = 2.3,   Method: Composition-based stats.
 Identities = 7/40 (17%), Positives = 20/40 (50%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            VN+  E  ++    + ++AN + I   +++  +   ++R
Sbjct: 393 GVNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSLFSIIR 432



 Score = 34.5 bits (77), Expect = 5.1,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 30/91 (32%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
          +   SG+      +Q   +N++N  T G       Y     S         G  V+ +GV
Sbjct: 7  NTPLSGMLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGSVGASNGHTPEQRIGYGVQTLGV 66

Query: 69 DQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
          D+ T   +    +   +      Y N  +  
Sbjct: 67 DRITDEVKTKQFNDQLSQLSYYNYMNSTLSR 97


>gi|229160702|ref|ZP_04288694.1| Flagellar hook-associated protein FlgK [Bacillus cereus R309803]
 gi|228622717|gb|EEK79551.1| Flagellar hook-associated protein FlgK [Bacillus cereus R309803]
          Length = 432

 Score = 35.6 bits (80), Expect = 2.3,   Method: Composition-based stats.
 Identities = 7/40 (17%), Positives = 20/40 (50%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            VN+  E  ++    + ++AN + I   +++  +   ++R
Sbjct: 393 GVNMEEEMVNLMAFQKYFVANSKAINTMNEVFDSLFSIIR 432



 Score = 34.1 bits (76), Expect = 6.4,   Method: Composition-based stats.
 Identities = 16/91 (17%), Positives = 31/91 (34%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
          +   SG+      +Q   +N++N  T G    +        S   +     G  V+ +GV
Sbjct: 7  NTPLSGMLAAQMGLQTTKQNLSNIHTPGYVRQAVNIASAGASNGHMPAQRIGNGVQTLGV 66

Query: 69 DQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
          D+ T   +    +   +      Y N  +  
Sbjct: 67 DRITDEVKTKQYNDQLSQFSYYAYMNSTLSR 97


>gi|217327976|ref|ZP_03444058.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str.
          TW14588]
 gi|217318403|gb|EEC26829.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str.
          TW14588]
          Length = 372

 Score = 35.6 bits (80), Expect = 2.3,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 4/63 (6%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          +   A SGL   +  + +I  NIAN+ T G   G+  +               GV+V  I
Sbjct: 2  AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFA----DMFAGSKVGLGVKVAGI 57

Query: 67 GVD 69
            D
Sbjct: 58 TQD 60


>gi|218896670|ref|YP_002445081.1| flagellar hook-associated protein FlgK [Bacillus cereus G9842]
 gi|228900319|ref|ZP_04064549.1| Flagellar hook-associated protein FlgK [Bacillus thuringiensis IBL
           4222]
 gi|218546008|gb|ACK98402.1| flagellar hook-associated protein FlgK [Bacillus cereus G9842]
 gi|228859354|gb|EEN03784.1| Flagellar hook-associated protein FlgK [Bacillus thuringiensis IBL
           4222]
          Length = 432

 Score = 35.6 bits (80), Expect = 2.3,   Method: Composition-based stats.
 Identities = 7/40 (17%), Positives = 20/40 (50%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            VN+  E  ++    + ++AN + I   +++  +   ++R
Sbjct: 393 GVNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSLFSIIR 432



 Score = 34.5 bits (77), Expect = 5.2,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 30/91 (32%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
          +   SG+      +Q   +N++N  T G       Y     S         G  V+ +GV
Sbjct: 7  NTPLSGMLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGSVGASNGHTPEQRIGYGVQTLGV 66

Query: 69 DQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
          D+ T   +    +   +      Y N  +  
Sbjct: 67 DRITDEVKTKQFNDQLSQLSYYNYMNSTLSR 97


>gi|206970814|ref|ZP_03231766.1| putative flagellar hook-associated protein [Bacillus cereus AH1134]
 gi|206734450|gb|EDZ51620.1| putative flagellar hook-associated protein [Bacillus cereus AH1134]
          Length = 432

 Score = 35.6 bits (80), Expect = 2.3,   Method: Composition-based stats.
 Identities = 7/40 (17%), Positives = 20/40 (50%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            VN+  E  ++    + ++AN + I   +++  +   ++R
Sbjct: 393 GVNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSLFSIIR 432



 Score = 34.5 bits (77), Expect = 5.2,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 30/91 (32%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
          +   SG+      +Q   +N++N  T G       Y     S         G  V+ +GV
Sbjct: 7  NTPLSGMLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGSVGASNGHTPEQRIGYGVQTLGV 66

Query: 69 DQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
          D+ T   +    +   +      Y N  +  
Sbjct: 67 DRITDEVKTKQFNDQLSQLSYYNYMNSTLSR 97


>gi|54308103|ref|YP_129123.1| flagellar hook-associated protein FlgK [Photobacterium profundum
           SS9]
 gi|46912529|emb|CAG19321.1| hypothetical flagellar hook-associated protein FlgM [Photobacterium
           profundum SS9]
          Length = 626

 Score = 35.6 bits (80), Expect = 2.3,   Method: Composition-based stats.
 Identities = 16/124 (12%), Positives = 43/124 (34%)

Query: 8   AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
             +++  +      + + + +  N                      +    G      + 
Sbjct: 502 FTLSSGAMGGDVFAVNLNAADGNNGNLIKMQDLQAQKIMNDGRSSVIDVYEGLNTEMGVQ 561

Query: 68  VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
              ++ ++E       A  S + +   VN+  E A+M +  + YMA+ + +  ++D   T
Sbjct: 562 KASASRLKEVGLVEKDAAQSRVAEIGGVNMDEEAANMMKFQQAYMASSRIMSVANDTFDT 621

Query: 128 TLDL 131
            L++
Sbjct: 622 LLNI 625


>gi|238796909|ref|ZP_04640413.1| Flagellar hook-associated protein [Yersinia mollaretii ATCC 43969]
 gi|238719169|gb|EEQ10981.1| Flagellar hook-associated protein [Yersinia mollaretii ATCC 43969]
          Length = 547

 Score = 35.6 bits (80), Expect = 2.3,   Method: Composition-based stats.
 Identities = 11/72 (15%), Positives = 27/72 (37%), Gaps = 2/72 (2%)

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKY--PNVNVLVETADMRETNRLYMANLQTIKQ 120
           V  +G   +T            +A    +     V++  E  +++   + Y AN Q ++ 
Sbjct: 476 VSSVGSSMTTLKANAATTAKAHDAIAYQQQAVSGVDMSEEFMNLQLYTQYYQANAQVLQT 535

Query: 121 SHDMMTTTLDLL 132
           +  +  + L + 
Sbjct: 536 ATTIFDSLLSIK 547


>gi|327480021|gb|AEA83331.1| flagellar basal body rod protein FlgF [Pseudomonas stutzeri DSM
           4166]
          Length = 246

 Score = 35.6 bits (80), Expect = 2.3,   Method: Composition-based stats.
 Identities = 8/37 (21%), Positives = 20/37 (54%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
           SG ++  NVN + E   +   +R +  +++ ++ + D
Sbjct: 198 SGFLETSNVNAVSEMTSILALSRQFELHVKMMRTAED 234


>gi|237755436|ref|ZP_04584061.1| flagellar basal-body rod protein FlgF [Sulfurihydrogenibium
           yellowstonense SS-5]
 gi|237692400|gb|EEP61383.1| flagellar basal-body rod protein FlgF [Sulfurihydrogenibium
           yellowstonense SS-5]
          Length = 236

 Score = 35.6 bits (80), Expect = 2.3,   Method: Composition-based stats.
 Identities = 10/66 (15%), Positives = 24/66 (36%)

Query: 68  VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
           V  S +  +           G ++  N+NV+ E  +M   +R +   +   K    +   
Sbjct: 170 VGSSYYQGQEQQTTNFEIKQGYLEGANLNVVKEMVEMINNHRRFDIYMNLAKSLDMLEGK 229

Query: 128 TLDLLR 133
             ++ +
Sbjct: 230 VNEIGK 235


>gi|297583333|ref|YP_003699113.1| flagellar hook-associated protein FlgK [Bacillus selenitireducens
           MLS10]
 gi|297141790|gb|ADH98547.1| flagellar hook-associated protein FlgK [Bacillus selenitireducens
           MLS10]
          Length = 660

 Score = 35.6 bits (80), Expect = 2.3,   Method: Composition-based stats.
 Identities = 5/38 (13%), Positives = 17/38 (44%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            +V++  E   M +    Y A  +++    +++   ++
Sbjct: 616 SSVSLDEEMTMMIQFQHAYNAAARSLTAVDEILDRIIN 653


>gi|324325790|gb|ADY21050.1| flagellar basal body rod protein FlgG [Bacillus thuringiensis
           serovar finitimus YBT-020]
          Length = 257

 Score = 35.6 bits (80), Expect = 2.4,   Method: Composition-based stats.
 Identities = 12/90 (13%), Positives = 31/90 (34%), Gaps = 1/90 (1%)

Query: 45  RRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
            R      +    S  ++ +      +       P       + +++  NV++  E AD+
Sbjct: 168 ARLQTKTVDAEANSRLMQRENKSFTLAEGNIADLPNGTGLVKNHMLENSNVDMTKEMADL 227

Query: 105 RETNRLYMANLQTIKQSHDMMTT-TLDLLR 133
               R+  A+ + +     +      ++LR
Sbjct: 228 MTDQRMISASQRVMTSFDKIYEKEANEILR 257


>gi|89056685|ref|YP_512136.1| flagellar basal body rod protein FlgF [Jannaschia sp. CCS1]
 gi|88866234|gb|ABD57111.1| flagellar basal-body rod protein FlgF [Jannaschia sp. CCS1]
          Length = 240

 Score = 35.6 bits (80), Expect = 2.4,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 16/46 (34%)

Query: 78  DPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
            P        G ++  NV+ + + A M E  R Y      +    +
Sbjct: 182 QPADNARILQGFLEQSNVDPVAQIARMIEVQRAYELGQSFMDAEDN 227


>gi|228907371|ref|ZP_04071229.1| Flagellar hook-associated protein FlgK [Bacillus thuringiensis IBL
           200]
 gi|228852232|gb|EEM97028.1| Flagellar hook-associated protein FlgK [Bacillus thuringiensis IBL
           200]
          Length = 432

 Score = 35.6 bits (80), Expect = 2.4,   Method: Composition-based stats.
 Identities = 7/40 (17%), Positives = 20/40 (50%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            VN+  E  ++    + ++AN + I   +++  +   ++R
Sbjct: 393 GVNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSLFSIIR 432



 Score = 34.5 bits (77), Expect = 5.4,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 30/91 (32%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
          +   SG+      +Q   +N++N  T G       Y     S         G  V+ +GV
Sbjct: 7  NTPLSGMLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGSVGASNGHTPEQRIGYGVQTLGV 66

Query: 69 DQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
          D+ T   +    +   +      Y N  +  
Sbjct: 67 DRITDEVKTKQFNDQLSQLSYYNYMNSTLSR 97


>gi|228914317|ref|ZP_04077932.1| Flagellar hook-associated protein FlgK [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
 gi|228845311|gb|EEM90347.1| Flagellar hook-associated protein FlgK [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
          Length = 420

 Score = 35.6 bits (80), Expect = 2.4,   Method: Composition-based stats.
 Identities = 7/40 (17%), Positives = 20/40 (50%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            VN+  E  ++    + ++AN + I   +++  +   ++R
Sbjct: 381 GVNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSLFSIIR 420


>gi|218704490|ref|YP_002412009.1| flagellar hook-associated protein FlgK [Escherichia coli UMN026]
 gi|293404366|ref|ZP_06648360.1| flgK [Escherichia coli FVEC1412]
 gi|298380146|ref|ZP_06989751.1| flagellar hook-associated protein 1 [Escherichia coli FVEC1302]
 gi|300899601|ref|ZP_07117840.1| flagellar hook-associated protein FlgK [Escherichia coli MS 198-1]
 gi|218431587|emb|CAR12466.1| flagellar hook-filament junction protein 1 [Escherichia coli
           UMN026]
 gi|291428952|gb|EFF01977.1| flgK [Escherichia coli FVEC1412]
 gi|298279844|gb|EFI21352.1| flagellar hook-associated protein 1 [Escherichia coli FVEC1302]
 gi|300356872|gb|EFJ72742.1| flagellar hook-associated protein FlgK [Escherichia coli MS 198-1]
          Length = 547

 Score = 35.6 bits (80), Expect = 2.4,   Method: Composition-based stats.
 Identities = 15/110 (13%), Positives = 35/110 (31%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           + +  + A SGL    A +   S NI++    G T  +    +   +         GV V
Sbjct: 1   MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMTQANSTLGAGGWVGNGVYV 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
             +  +   F+          ++    +Y  ++ +        ++     
Sbjct: 61  SGVQREYDAFITNQLRAAQTQSSGLTARYEQMSKIDNMLSTSTSSLATQM 110


>gi|47565441|ref|ZP_00236482.1| flagellar basal-body rod protein flgF, putative [Bacillus cereus
           G9241]
 gi|47557431|gb|EAL15758.1| flagellar basal-body rod protein flgF, putative [Bacillus cereus
           G9241]
          Length = 257

 Score = 35.6 bits (80), Expect = 2.4,   Method: Composition-based stats.
 Identities = 10/64 (15%), Positives = 25/64 (39%), Gaps = 1/64 (1%)

Query: 71  STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT-TL 129
           +       P       + +++  NV++  E AD+    R+  A+ + +     +      
Sbjct: 194 AEGNIADLPNGTGLVKNHMLENSNVDMTKEMADLMTDQRMISASQRVMTSFDKIYEKEAN 253

Query: 130 DLLR 133
           ++LR
Sbjct: 254 EILR 257


>gi|229109195|ref|ZP_04238794.1| Flagellar hook-associated protein FlgK [Bacillus cereus Rock1-15]
 gi|228674205|gb|EEL29450.1| Flagellar hook-associated protein FlgK [Bacillus cereus Rock1-15]
          Length = 432

 Score = 35.6 bits (80), Expect = 2.4,   Method: Composition-based stats.
 Identities = 13/126 (10%), Positives = 38/126 (30%), Gaps = 18/126 (14%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRK-TISFEEVMHGSGGVRVKKIG 67
            ++   ++ +       +  +A         G    +             S     +KI 
Sbjct: 324 DVSKMKMSAE------TANKLAAVTDDDYKEGLSYKQALDQFIVRVASDKSAVNGYQKIH 377

Query: 68  VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
            D    +++                  VN+  E  ++    + ++AN + I   +++  +
Sbjct: 378 GDLLEGIQQEKMSVE-----------GVNMEEEMVNLMAFQKYFVANSKAITTMNEVFDS 426

Query: 128 TLDLLR 133
              ++R
Sbjct: 427 LFSIIR 432



 Score = 34.1 bits (76), Expect = 5.9,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 30/91 (32%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
          +   SG+      +Q   +N++N  T G       Y     S         G  V+ +GV
Sbjct: 7  NTPLSGMLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGSVGASNGHTPEQRIGYGVQTLGV 66

Query: 69 DQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
          D+ T   +    +   +      Y N  +  
Sbjct: 67 DRITDEVKTKQFNDQLSQLSYYNYMNSTLSR 97


>gi|254511786|ref|ZP_05123853.1| flagellar hook-associated protein FlgK [Rhodobacteraceae
          bacterium KLH11]
 gi|221535497|gb|EEE38485.1| flagellar hook-associated protein FlgK [Rhodobacteraceae
          bacterium KLH11]
          Length = 483

 Score = 35.6 bits (80), Expect = 2.4,   Method: Composition-based stats.
 Identities = 21/71 (29%), Positives = 28/71 (39%), Gaps = 7/71 (9%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            +  + + A  GL   S    ++S NIANA T G       Y R+T+          GV
Sbjct: 1  MNMSTALNNALGGLNAASRGAAVVSGNIANALTPG-------YARRTLELTTSPISGNGV 53

Query: 62 RVKKIGVDQST 72
          RV  I   Q  
Sbjct: 54 RVVGITRHQDP 64



 Score = 33.7 bits (75), Expect = 8.8,   Method: Composition-based stats.
 Identities = 13/61 (21%), Positives = 22/61 (36%)

Query: 71  STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           S         +       IV    V+  VE   + +  + Y AN + +    ++M T L 
Sbjct: 423 SADQRRSFAANAQLEMEKIVAEQGVDSDVELQRLMQIEQAYAANARIVAVVDELMDTLLR 482

Query: 131 L 131
           L
Sbjct: 483 L 483


>gi|182680551|ref|YP_001834697.1| flagellar basal body rod protein FlgB [Beijerinckia indica subsp.
           indica ATCC 9039]
 gi|182636434|gb|ACB97208.1| flagellar basal body rod protein FlgB [Beijerinckia indica subsp.
           indica ATCC 9039]
          Length = 126

 Score = 35.6 bits (80), Expect = 2.4,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 32/111 (28%), Gaps = 4/111 (3%)

Query: 19  SARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFD 78
           + R   I++NIA A     TPG                G          +       +  
Sbjct: 18  TLRQATIAQNIAQAN----TPGFKSVDLLPFEQVYSESGLRMTATSPKHLAADPNEADLT 73

Query: 79  PGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
            GH  A         +V++  E     E +  Y  N    +    M+ T +
Sbjct: 74  AGHTEAGWETTHSGNSVSLEQELMKTGEIHGAYTLNTNIARSFQQMLLTAV 124


>gi|218235346|ref|YP_002366423.1| flagellar hook-associated protein FlgK [Bacillus cereus B4264]
 gi|229069290|ref|ZP_04202580.1| Flagellar hook-associated protein FlgK [Bacillus cereus F65185]
 gi|229078920|ref|ZP_04211472.1| Flagellar hook-associated protein FlgK [Bacillus cereus Rock4-2]
 gi|229178147|ref|ZP_04305518.1| Flagellar hook-associated protein FlgK [Bacillus cereus 172560W]
 gi|218163303|gb|ACK63295.1| putative flagellar hook-associated protein [Bacillus cereus B4264]
 gi|228605277|gb|EEK62727.1| Flagellar hook-associated protein FlgK [Bacillus cereus 172560W]
 gi|228704334|gb|EEL56768.1| Flagellar hook-associated protein FlgK [Bacillus cereus Rock4-2]
 gi|228713777|gb|EEL65662.1| Flagellar hook-associated protein FlgK [Bacillus cereus F65185]
          Length = 432

 Score = 35.6 bits (80), Expect = 2.4,   Method: Composition-based stats.
 Identities = 13/126 (10%), Positives = 38/126 (30%), Gaps = 18/126 (14%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRK-TISFEEVMHGSGGVRVKKIG 67
            ++   ++ +       +  +A         G    +             S     +KI 
Sbjct: 324 DVSKMKMSAE------TANKLAAVTDDDYKEGLSYKQALDQFIVRVASDKSAVNGYQKIH 377

Query: 68  VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
            D    +++                  VN+  E  ++    + ++AN + I   +++  +
Sbjct: 378 GDLLEGIQQEKMSVE-----------GVNMEEEMVNLMAFQKYFVANSKAITTMNEVFDS 426

Query: 128 TLDLLR 133
              ++R
Sbjct: 427 LFSIIR 432



 Score = 34.1 bits (76), Expect = 5.9,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 30/91 (32%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
          +   SG+      +Q   +N++N  T G       Y     S         G  V+ +GV
Sbjct: 7  NTPLSGMLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGSVGASNGHTPEQRIGYGVQTLGV 66

Query: 69 DQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
          D+ T   +    +   +      Y N  +  
Sbjct: 67 DRITDEVKTKQFNDQLSQLSYYNYMNSTLSR 97


>gi|327254560|gb|EGE66176.1| flagellar hook-associated protein FlgK [Escherichia coli STEC_7v]
          Length = 458

 Score = 35.6 bits (80), Expect = 2.4,   Method: Composition-based stats.
 Identities = 8/39 (20%), Positives = 20/39 (51%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             V++  E  ++    ++Y ANL+ I    ++  + L++
Sbjct: 418 SGVSMDEEAVNLITYQQIYEANLKVISAGAEIFDSVLEM 456


>gi|331671810|ref|ZP_08372606.1| flagellar hook-associated protein FlgK [Escherichia coli TA280]
 gi|331070799|gb|EGI42158.1| flagellar hook-associated protein FlgK [Escherichia coli TA280]
          Length = 458

 Score = 35.6 bits (80), Expect = 2.4,   Method: Composition-based stats.
 Identities = 8/39 (20%), Positives = 20/39 (51%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             V++  E  ++    ++Y ANL+ I    ++  + L++
Sbjct: 418 SGVSMDEEAVNLITYQQIYEANLKVISAGAEIFDSVLEM 456


>gi|228938852|ref|ZP_04101452.1| Flagellar hook-associated protein FlgK [Bacillus thuringiensis
           serovar berliner ATCC 10792]
 gi|228971733|ref|ZP_04132354.1| Flagellar hook-associated protein FlgK [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
 gi|228978342|ref|ZP_04138719.1| Flagellar hook-associated protein FlgK [Bacillus thuringiensis
           Bt407]
 gi|228781359|gb|EEM29560.1| Flagellar hook-associated protein FlgK [Bacillus thuringiensis
           Bt407]
 gi|228787823|gb|EEM35781.1| Flagellar hook-associated protein FlgK [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
 gi|228820701|gb|EEM66726.1| Flagellar hook-associated protein FlgK [Bacillus thuringiensis
           serovar berliner ATCC 10792]
 gi|326939352|gb|AEA15248.1| flagellar hook-associated protein FlgK [Bacillus thuringiensis
           serovar chinensis CT-43]
          Length = 432

 Score = 35.6 bits (80), Expect = 2.4,   Method: Composition-based stats.
 Identities = 7/40 (17%), Positives = 20/40 (50%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            VN+  E  ++    + ++AN + I   +++  +   ++R
Sbjct: 393 GVNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSLFSIIR 432



 Score = 34.5 bits (77), Expect = 5.4,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 30/91 (32%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
          +   SG+      +Q   +N++N  T G       Y     S         G  V+ +GV
Sbjct: 7  NTPLSGMLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGSVGASNGHTPEQRIGYGVQTLGV 66

Query: 69 DQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
          D+ T   +    +   +      Y N  +  
Sbjct: 67 DRITDEVKTKQFNDQLSQLSYYNYMNSTLSR 97


>gi|317013797|gb|ADU81233.1| flagellar basal-body rod protein [Helicobacter pylori Gambia94/24]
          Length = 269

 Score = 35.6 bits (80), Expect = 2.5,   Method: Composition-based stats.
 Identities = 11/60 (18%), Positives = 21/60 (35%), Gaps = 1/60 (1%)

Query: 72  TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ-SHDMMTTTLD 130
                       A    +++  NVN + E + + E NR      + +K    DM    ++
Sbjct: 204 QGEGIHQVSDSGALRQSMLEKSNVNAVREMSALIEINRFLDMYSKVLKTHQDDMNAEAIN 263


>gi|283784090|ref|YP_003363955.1| lateral flagellar hook associated protein 1 [Citrobacter rodentium
           ICC168]
 gi|282947544|emb|CBG87097.1| lateral flagellar hook associated protein 1 [Citrobacter rodentium
           ICC168]
          Length = 455

 Score = 35.6 bits (80), Expect = 2.5,   Method: Composition-based stats.
 Identities = 8/41 (19%), Positives = 22/41 (53%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +  +V++  E  ++    ++Y ANL+ I    ++  + L++
Sbjct: 413 QQSSVSMDEEAVNLITYQQIYEANLKVISAGAEIFDSVLEM 453


>gi|229183930|ref|ZP_04311146.1| Flagellar hook-associated protein FlgK [Bacillus cereus BGSC 6E1]
 gi|228599582|gb|EEK57186.1| Flagellar hook-associated protein FlgK [Bacillus cereus BGSC 6E1]
          Length = 420

 Score = 35.6 bits (80), Expect = 2.5,   Method: Composition-based stats.
 Identities = 7/40 (17%), Positives = 20/40 (50%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            VN+  E  ++    + ++AN + I   +++  +   ++R
Sbjct: 381 GVNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSLFSIIR 420


>gi|167948873|ref|ZP_02535947.1| Flagellar basal-body rod protein FlgB [Endoriftia persephone
           'Hot96_1+Hot96_2']
          Length = 127

 Score = 35.6 bits (80), Expect = 2.5,   Method: Composition-based stats.
 Identities = 18/116 (15%), Positives = 38/116 (32%), Gaps = 2/116 (1%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +   + I    L +++ R ++I+ N+ANA T G       + +     +           
Sbjct: 1   MTTPSGIHPQALLLRARRSELIASNLANADTPGYKARDFDFHKVLQQAQGEPVRLRTTHP 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
             I  +Q             +  S  +    V    E +     +  Y A+L+ + 
Sbjct: 61  SHIQDEQGVVPPTQMLYRIPSQPS--LDGNTVETEREQSTFASNSLEYQASLRFLN 114


>gi|321445153|gb|EFX60611.1| hypothetical protein DAPPUDRAFT_342411 [Daphnia pulex]
          Length = 136

 Score = 35.6 bits (80), Expect = 2.5,   Method: Composition-based stats.
 Identities = 25/131 (19%), Positives = 46/131 (35%), Gaps = 3/131 (2%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           L  + +     L ++S R ++++ NIANA T G       +            G      
Sbjct: 5   LTDTLNFQTQALVLRSERQRLLASNIANADTPGYKARDMDFASALREATGAARGGAMAAT 64

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
           +   +               A +   +    V++  E A   + +  Y A L+ I  S  
Sbjct: 65  QAGHISPPAGARSEAKLLWAAPSQTNLDNNTVDMDRERASFADNSIKYEATLRFINSS-- 122

Query: 124 MMTTTLDLLRD 134
            + TTLD ++ 
Sbjct: 123 -VRTTLDSMKS 132


>gi|225377360|ref|ZP_03754581.1| hypothetical protein ROSEINA2194_03008 [Roseburia inulinivorans
          DSM 16841]
 gi|225210785|gb|EEG93139.1| hypothetical protein ROSEINA2194_03008 [Roseburia inulinivorans
          DSM 16841]
          Length = 51

 Score = 35.6 bits (80), Expect = 2.5,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 23/46 (50%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTI 49
          +I   + A +G+  +  R+ +++ N+ANA T G        RR  +
Sbjct: 1  MIKGLYTAYTGMVNEQKRLDVLTNNLANADTNGYKKKGQHRRRLRM 46


>gi|225552251|ref|ZP_03773191.1| flagellar hook-associated protein FlgK [Borrelia sp. SV1]
 gi|225371249|gb|EEH00679.1| flagellar hook-associated protein FlgK [Borrelia sp. SV1]
          Length = 627

 Score = 35.6 bits (80), Expect = 2.5,   Method: Composition-based stats.
 Identities = 13/80 (16%), Positives = 24/80 (30%), Gaps = 7/80 (8%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDP-------YRRKTISFEE 53
          MD   +   I    L      M  +  N++NA   G +            Y  +    ++
Sbjct: 1  MDSTFSGIEIGKRSLFAHKDAMNTVGHNLSNATKPGYSRQRVTMKTAIPLYAPQLNRAKK 60

Query: 54 VMHGSGGVRVKKIGVDQSTF 73
                G+ V+ I   +   
Sbjct: 61 QGQLGQGIVVQSIDRVKDEL 80


>gi|296502373|ref|YP_003664073.1| flagellar basal body rod protein FlgG [Bacillus thuringiensis
           BMB171]
 gi|296323425|gb|ADH06353.1| flagellar basal body rod protein FlgG [Bacillus thuringiensis
           BMB171]
          Length = 246

 Score = 35.6 bits (80), Expect = 2.5,   Method: Composition-based stats.
 Identities = 9/64 (14%), Positives = 25/64 (39%), Gaps = 1/64 (1%)

Query: 71  STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT-TL 129
           +       P       + +++  NV++  E AD+    ++  A+ + +     +      
Sbjct: 183 AEGNIANLPNGTGIVKNHMLENSNVDMTKEMADLMTDQKMIQASQRVMTSFDKIYEKEAN 242

Query: 130 DLLR 133
           ++LR
Sbjct: 243 EILR 246


>gi|270262395|ref|ZP_06190666.1| flagellar hook-associated protein FlgK [Serratia odorifera 4Rx13]
 gi|270043079|gb|EFA16172.1| flagellar hook-associated protein FlgK [Serratia odorifera 4Rx13]
          Length = 548

 Score = 35.6 bits (80), Expect = 2.5,   Method: Composition-based stats.
 Identities = 14/95 (14%), Positives = 29/95 (30%)

Query: 8   AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
            + A SGL      +  +S NI+N    G    +    +             GV V  + 
Sbjct: 6   INTAMSGLNAAQVALSTVSNNISNYNVAGYNRQTAILAQNGGMSTMSGFIGNGVTVTSVN 65

Query: 68  VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETA 102
            + + F+     G      +    +  ++ +    
Sbjct: 66  REYNQFITSQLRGAQSQAGAQNAYFEKISQIDNLL 100



 Score = 34.8 bits (78), Expect = 4.4,   Method: Composition-based stats.
 Identities = 20/118 (16%), Positives = 40/118 (33%), Gaps = 10/118 (8%)

Query: 24  IISENIANARTTGDTPGSDP--------YRRKTISFEEVMHGSGGVRVKKIGVDQSTFVE 75
             S NIA A       G +           +K +  +    G+    V  +G   ++   
Sbjct: 430 TDSANIAAAGKDDSGRGDNENAKKLLDLQTQKLVDGKATFSGAYASLVSSVGNQTASAKV 489

Query: 76  EFDPGHPVANASGIVKYP--NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
                  +       +     VN+  E  ++    + YMAN + I+ +  +  T L++
Sbjct: 490 TATSQGNIVKQLENQQQSISGVNLDEEYGELLRFQQYYMANSKVIQTASTLFDTLLNI 547


>gi|218703531|ref|YP_002411050.1| lateral flagellar hook associated FlgK-like protein [Escherichia
           coli UMN026]
 gi|293403361|ref|ZP_06647452.1| predicted protein [Escherichia coli FVEC1412]
 gi|298378972|ref|ZP_06988853.1| flagellar hook-associated protein 1 FlgK [Escherichia coli
           FVEC1302]
 gi|300899458|ref|ZP_07117706.1| flagellar hook-associated protein FlgK [Escherichia coli MS 198-1]
 gi|218430628|emb|CAR11494.1| Lateral flagellar hook associated protein 1 (FlgK-like)
           [Escherichia coli UMN026]
 gi|291429214|gb|EFF02234.1| predicted protein [Escherichia coli FVEC1412]
 gi|298280085|gb|EFI21589.1| flagellar hook-associated protein 1 FlgK [Escherichia coli
           FVEC1302]
 gi|300356937|gb|EFJ72807.1| flagellar hook-associated protein FlgK [Escherichia coli MS 198-1]
          Length = 458

 Score = 35.6 bits (80), Expect = 2.5,   Method: Composition-based stats.
 Identities = 8/39 (20%), Positives = 20/39 (51%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             V++  E  ++    ++Y ANL+ I    ++  + L++
Sbjct: 418 SGVSMDEEAVNLITYQQIYEANLKVISAGAEIFDSVLEM 456


>gi|313905150|ref|ZP_07838519.1| fagellar hook-basal body protein [Eubacterium cellulosolvens 6]
 gi|313470053|gb|EFR65386.1| fagellar hook-basal body protein [Eubacterium cellulosolvens 6]
          Length = 253

 Score = 35.6 bits (80), Expect = 2.5,   Method: Composition-based stats.
 Identities = 6/42 (14%), Positives = 20/42 (47%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
           +G ++  N +++ +  +M  + R   +  Q +K    +++  
Sbjct: 205 NGYLEASNADMIGQMTEMMSSQRALQSAAQMLKMYDQVLSKA 246


>gi|229069323|ref|ZP_04202613.1| Flagellar basal-body rod protein flgG [Bacillus cereus F65185]
 gi|229078954|ref|ZP_04211506.1| Flagellar basal-body rod protein flgG [Bacillus cereus Rock4-2]
 gi|228704368|gb|EEL56802.1| Flagellar basal-body rod protein flgG [Bacillus cereus Rock4-2]
 gi|228713810|gb|EEL65695.1| Flagellar basal-body rod protein flgG [Bacillus cereus F65185]
          Length = 257

 Score = 35.6 bits (80), Expect = 2.5,   Method: Composition-based stats.
 Identities = 9/64 (14%), Positives = 25/64 (39%), Gaps = 1/64 (1%)

Query: 71  STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT-TL 129
           +       P       + +++  NV++  E AD+    ++  A+ + +     +      
Sbjct: 194 AEGNVANLPNGTGIVKNHMLENSNVDMTKEMADLMTDQKMIQASQRVMTSFDKIYEKEAN 253

Query: 130 DLLR 133
           ++LR
Sbjct: 254 EILR 257


>gi|159045791|ref|YP_001534585.1| flagellar basal body rod protein FlgF [Dinoroseobacter shibae DFL
           12]
 gi|157913551|gb|ABV94984.1| flagellar basal-body rod protein FlgF [Dinoroseobacter shibae DFL
           12]
          Length = 238

 Score = 35.6 bits (80), Expect = 2.5,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 25/62 (40%), Gaps = 1/62 (1%)

Query: 73  FVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD-L 131
                 P    +   G ++  NVN +VE A M E  R Y +    I +  D + T +  L
Sbjct: 177 PNGGVLPAENASVHQGFIEGSNVNPIVEVARMIEVQRRYESAKSFIDKEDDRIKTVIQTL 236

Query: 132 LR 133
            R
Sbjct: 237 GR 238


>gi|312962293|ref|ZP_07776784.1| flagellar basal-body rod protein FlgG [Pseudomonas fluorescens WH6]
 gi|311283220|gb|EFQ61810.1| flagellar basal-body rod protein FlgG [Pseudomonas fluorescens WH6]
          Length = 38

 Score = 35.6 bits (80), Expect = 2.5,   Method: Composition-based stats.
 Identities = 8/32 (25%), Positives = 16/32 (50%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           ++ + E  +M  T R Y  N + I  +  M++
Sbjct: 1   MSTVEEMVNMITTQRAYEMNSKVISTADQMLS 32


>gi|149194279|ref|ZP_01871376.1| flagellar basal-body rod protein [Caminibacter mediatlanticus TB-2]
 gi|149135454|gb|EDM23933.1| flagellar basal-body rod protein [Caminibacter mediatlanticus TB-2]
          Length = 262

 Score = 35.6 bits (80), Expect = 2.5,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 20/41 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
            G ++  NVNV+ E  D+ ETNRL     + +    D +  
Sbjct: 211 QGFIEKSNVNVIKEMTDLIETNRLVEQYQKVMTTFMDDLNK 251


>gi|170021354|ref|YP_001726308.1| flagellar hook-associated protein FlgK [Escherichia coli ATCC 8739]
 gi|169756282|gb|ACA78981.1| flagellar hook-associated protein FlgK [Escherichia coli ATCC 8739]
          Length = 458

 Score = 35.6 bits (80), Expect = 2.5,   Method: Composition-based stats.
 Identities = 8/39 (20%), Positives = 20/39 (51%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             V++  E  ++    ++Y ANL+ I    ++  + L++
Sbjct: 418 SGVSMDEEAVNLITYQQIYEANLKVISAGAEIFDSVLEM 456


>gi|326386927|ref|ZP_08208541.1| flagellar proximal rod protein [Novosphingobium nitrogenifigens DSM
           19370]
 gi|326208607|gb|EGD59410.1| flagellar proximal rod protein [Novosphingobium nitrogenifigens DSM
           19370]
          Length = 118

 Score = 35.6 bits (80), Expect = 2.6,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 38/120 (31%), Gaps = 16/120 (13%)

Query: 1   MDYLIAS-AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
           M  +  S   I    L +++ R+ +++ NIANA T G         R       +   + 
Sbjct: 1   MSIMGDSLFGIHGMALELRAQRLGLLTSNIANAATPG------YKARDIDFASALKSMTQ 54

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
           G    +     + +     P          +    V +  E     E    Y A L  I+
Sbjct: 55  GASNSQAISSSTLYRVPVMPS---------LDGNTVELSTEQTAFAENAVGYEATLNMIQ 105


>gi|323976263|gb|EGB71356.1| flagellar hook protein FlgK [Escherichia coli TW10509]
          Length = 458

 Score = 35.6 bits (80), Expect = 2.6,   Method: Composition-based stats.
 Identities = 8/39 (20%), Positives = 20/39 (51%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             V++  E  ++    ++Y ANL+ I    ++  + L++
Sbjct: 418 SGVSMDEEAVNLITYQQIYEANLKVISAGAEIFDSVLEM 456


>gi|301645421|ref|ZP_07245362.1| flagellar hook-associated protein FlgK [Escherichia coli MS 146-1]
 gi|307136864|ref|ZP_07496220.1| flagellar hook-associated protein FlgK [Escherichia coli H736]
 gi|331640719|ref|ZP_08341866.1| flagellar hook-associated protein FlgK [Escherichia coli H736]
 gi|301076305|gb|EFK91111.1| flagellar hook-associated protein FlgK [Escherichia coli MS 146-1]
 gi|315616821|gb|EFU97438.1| flagellar hook-associated protein FlgK [Escherichia coli 3431]
 gi|331040093|gb|EGI12301.1| flagellar hook-associated protein FlgK [Escherichia coli H736]
          Length = 458

 Score = 35.6 bits (80), Expect = 2.6,   Method: Composition-based stats.
 Identities = 8/39 (20%), Positives = 20/39 (51%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             V++  E  ++    ++Y ANL+ I    ++  + L++
Sbjct: 418 SGVSMDEEAVNLITYQQIYEANLKVISAGAEIFDSVLEM 456


>gi|261341488|ref|ZP_05969346.1| flagellar hook-associated protein FlgK [Enterobacter cancerogenus
          ATCC 35316]
 gi|288316284|gb|EFC55222.1| flagellar hook-associated protein FlgK [Enterobacter cancerogenus
          ATCC 35316]
          Length = 456

 Score = 35.6 bits (80), Expect = 2.6,   Method: Composition-based stats.
 Identities = 18/69 (26%), Positives = 27/69 (39%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          +   +IA SGL      M + S NI+NA T G +             +  M    GV+V+
Sbjct: 1  MNMINIAWSGLQAAQFGMSVTSMNISNALTPGYSRQGIIQSSVVTMGQGGMSAGAGVQVE 60

Query: 65 KIGVDQSTF 73
           I      +
Sbjct: 61 SIRRVSDQY 69


>gi|331645424|ref|ZP_08346528.1| flagellar hook-associated protein FlgK [Escherichia coli M605]
 gi|59889786|emb|CAH19142.1| Lateral flagellar hook associated protein 1 (FlgK-like)
           [Escherichia coli]
 gi|284920050|emb|CBG33107.1| lateral flagellar hook associated protein 1 (FlgK-like)
           [Escherichia coli 042]
 gi|331045586|gb|EGI17712.1| flagellar hook-associated protein FlgK [Escherichia coli M605]
          Length = 458

 Score = 35.6 bits (80), Expect = 2.6,   Method: Composition-based stats.
 Identities = 8/39 (20%), Positives = 20/39 (51%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             V++  E  ++    ++Y ANL+ I    ++  + L++
Sbjct: 418 SGVSMDEEAVNLITYQQIYEANLKVISAGAEIFDSVLEM 456


>gi|188492642|ref|ZP_02999912.1| flagellar hook-associated protein FlgK [Escherichia coli 53638]
 gi|188487841|gb|EDU62944.1| flagellar hook-associated protein FlgK [Escherichia coli 53638]
          Length = 458

 Score = 35.6 bits (80), Expect = 2.6,   Method: Composition-based stats.
 Identities = 8/39 (20%), Positives = 20/39 (51%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             V++  E  ++    ++Y ANL+ I    ++  + L++
Sbjct: 418 SGVSMDEEAVNLITYQQIYEANLKVISAGAEIFDSVLEM 456


>gi|229144385|ref|ZP_04272790.1| Flagellar basal-body rod protein flgG [Bacillus cereus BDRD-ST24]
 gi|228639016|gb|EEK95441.1| Flagellar basal-body rod protein flgG [Bacillus cereus BDRD-ST24]
          Length = 257

 Score = 35.6 bits (80), Expect = 2.6,   Method: Composition-based stats.
 Identities = 9/64 (14%), Positives = 25/64 (39%), Gaps = 1/64 (1%)

Query: 71  STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT-TL 129
           +       P       + +++  NV++  E AD+    ++  A+ + +     +      
Sbjct: 194 AEGNIANLPNGTGIVKNHMLENSNVDMTKEMADLMTDQKMIQASQRVMTSFDKIYEKEAN 253

Query: 130 DLLR 133
           ++LR
Sbjct: 254 EILR 257


>gi|149375037|ref|ZP_01892810.1| Flagellar basal body protein [Marinobacter algicola DG893]
 gi|149360926|gb|EDM49377.1| Flagellar basal body protein [Marinobacter algicola DG893]
          Length = 132

 Score = 35.6 bits (80), Expect = 2.6,   Method: Composition-based stats.
 Identities = 22/112 (19%), Positives = 42/112 (37%), Gaps = 1/112 (0%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
            L  +  I    L  +  R ++++ N+ANA T G       ++      ++ M G G  R
Sbjct: 4   SLDKALGIHQHALEGRIKRAEVLANNLANADTPGYKARDVDFQAMMQKAQDSMSGFGMTR 63

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMAN 114
             +  +D S+   + +  + V +    V    V+   E          Y A+
Sbjct: 64  THESHMDTSSMGADSELLYRVPHQPS-VDGNTVDAQQEQTRFMRNAMDYQAS 114


>gi|146278634|ref|YP_001168793.1| flagellar basal body rod protein FlgB [Rhodobacter sphaeroides ATCC
           17025]
 gi|145556875|gb|ABP71488.1| Flagellar basal body protein-like protein [Rhodobacter sphaeroides
           ATCC 17025]
          Length = 127

 Score = 35.6 bits (80), Expect = 2.6,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 40/114 (35%), Gaps = 8/114 (7%)

Query: 21  RMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPG 80
           R  +I+ N+AN+ T G         R    FE    G  G+R  + G  +S      +P 
Sbjct: 21  RTDVIARNVANSDTPG------YRARDLPDFESYAEGRTGLRGTRAGHLRSAAAVAAEPV 74

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
                 +      +V++  E        + +   L   + S  ++ T   L R 
Sbjct: 75  PAGIMGTASPNGNSVSLEEEMVKAVSARQQHEMALSIYQSSSRLIRT--SLGRS 126


>gi|46205476|ref|ZP_00048498.2| COG4786: Flagellar basal body rod protein [Magnetospirillum
           magnetotacticum MS-1]
          Length = 241

 Score = 35.6 bits (80), Expect = 2.6,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 19/43 (44%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
            G ++  NVN ++E   +    R + +      ++ + +T  +
Sbjct: 192 QGYIEGANVNPILEMTKLIAIQRAFESAATMTSEAENTLTGAV 234


>gi|323171070|gb|EFZ56719.1| flagellar hook-associated protein FlgK [Escherichia coli LT-68]
          Length = 458

 Score = 35.2 bits (79), Expect = 2.6,   Method: Composition-based stats.
 Identities = 8/39 (20%), Positives = 20/39 (51%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             V++  E  ++    ++Y ANL+ I    ++  + L++
Sbjct: 418 SGVSMDEEAVNLITYQQIYEANLKVISAGAEIFDSVLEM 456


>gi|256020234|ref|ZP_05434099.1| flagellar hook-associated protein FlgK [Shigella sp. D9]
 gi|300817263|ref|ZP_07097481.1| flagellar hook-associated protein FlgK [Escherichia coli MS 107-1]
 gi|332281396|ref|ZP_08393809.1| lateral flagellar hook associated protein 1 [Shigella sp. D9]
 gi|300530239|gb|EFK51301.1| flagellar hook-associated protein FlgK [Escherichia coli MS 107-1]
 gi|332103748|gb|EGJ07094.1| lateral flagellar hook associated protein 1 [Shigella sp. D9]
          Length = 458

 Score = 35.2 bits (79), Expect = 2.6,   Method: Composition-based stats.
 Identities = 8/39 (20%), Positives = 20/39 (51%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             V++  E  ++    ++Y ANL+ I    ++  + L++
Sbjct: 418 SGVSMDEEAVNLITYQQIYEANLKVISAGAEIFDSVLEM 456


>gi|255021351|ref|ZP_05293399.1| Flagellar basal-body rod protein flgB [Acidithiobacillus caldus
           ATCC 51756]
 gi|254969214|gb|EET26728.1| Flagellar basal-body rod protein flgB [Acidithiobacillus caldus
           ATCC 51756]
          Length = 137

 Score = 35.2 bits (79), Expect = 2.6,   Method: Composition-based stats.
 Identities = 20/122 (16%), Positives = 42/122 (34%), Gaps = 3/122 (2%)

Query: 1   MDYLIA-SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
           M  L+  +       L V   R Q+++ NIANA T        P+ +   + +    GS 
Sbjct: 1   MTSLLDQTLDPLADALKVSGYRQQLLAANIANANTPNYRAVDIPFAKTLAAVQRGAEGSL 60

Query: 60  GVRVKKIGVDQ--STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
            ++          +               +  +   +V++  E A   + +  Y A++  
Sbjct: 61  PMKTDSTRQFSGIAPGQNLAAFVQYQRGNAVGLDGNSVDMDREQASFLKNSIGYQADVTF 120

Query: 118 IK 119
           + 
Sbjct: 121 LT 122


>gi|322382414|ref|ZP_08056317.1| FlgK-like protein [Paenibacillus larvae subsp. larvae B-3650]
 gi|321153631|gb|EFX46010.1| FlgK-like protein [Paenibacillus larvae subsp. larvae B-3650]
          Length = 472

 Score = 35.2 bits (79), Expect = 2.7,   Method: Composition-based stats.
 Identities = 12/108 (11%), Positives = 31/108 (28%), Gaps = 2/108 (1%)

Query: 23  QIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHP 82
             +++ +A  + T  T           +  +      G    +       +  E      
Sbjct: 360 NTLAKLMAQLKDTKFTFSGAGRGITNSTINDFYGSLVGQLGVQSKEATRQYENEGKLVVQ 419

Query: 83  VANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
                  V    V  L E  +M + N  + A  + +    +++   ++
Sbjct: 420 ADTRRTSV--SGVVELEEMMEMVKYNHSFNAAARFMTTYDEILNKLIN 465


>gi|307945687|ref|ZP_07661023.1| flagellar hook-associated protein FlgK [Roseibium sp. TrichSKD4]
 gi|307771560|gb|EFO30785.1| flagellar hook-associated protein FlgK [Roseibium sp. TrichSKD4]
          Length = 617

 Score = 35.2 bits (79), Expect = 2.7,   Method: Composition-based stats.
 Identities = 7/41 (17%), Positives = 17/41 (41%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
             +   V++  E A +      Y AN + ++  +++    L
Sbjct: 574 YEESYAVDLDEEMAQLVNLQNAYAANARVMQAVNELFDRLL 614


>gi|307637047|gb|ADN79497.1| flagellar basal-body rod protein [Helicobacter pylori 908]
 gi|325995639|gb|ADZ51044.1| Flagellar basal-body rod protein [Helicobacter pylori 2018]
 gi|325997235|gb|ADZ49443.1| Flagellar basal-body rod protein [Helicobacter pylori 2017]
          Length = 269

 Score = 35.2 bits (79), Expect = 2.7,   Method: Composition-based stats.
 Identities = 11/60 (18%), Positives = 21/60 (35%), Gaps = 1/60 (1%)

Query: 72  TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ-SHDMMTTTLD 130
                       A    +++  NVN + E + + E NR      + +K    DM    ++
Sbjct: 204 QGEGIHQVSDSGALRQSMLEKSNVNAVREMSALIEINRFLDMYSKVLKTHQDDMNAEAIN 263


>gi|300936133|ref|ZP_07151072.1| flagellar hook-associated protein FlgK [Escherichia coli MS 21-1]
 gi|300458711|gb|EFK22204.1| flagellar hook-associated protein FlgK [Escherichia coli MS 21-1]
          Length = 458

 Score = 35.2 bits (79), Expect = 2.7,   Method: Composition-based stats.
 Identities = 8/39 (20%), Positives = 20/39 (51%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             V++  E  ++    ++Y ANL+ I    ++  + L++
Sbjct: 418 SGVSMDEEAVNLITYQQIYEANLKVISAGAEIFDSVLEM 456


>gi|300950179|ref|ZP_07164123.1| flagellar hook-associated protein FlgK [Escherichia coli MS 116-1]
 gi|300450464|gb|EFK14084.1| flagellar hook-associated protein FlgK [Escherichia coli MS 116-1]
          Length = 547

 Score = 35.2 bits (79), Expect = 2.7,   Method: Composition-based stats.
 Identities = 16/110 (14%), Positives = 36/110 (32%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           + +  + A SGL    A +   S NI++    G T  +    +   +      G  GV V
Sbjct: 1   MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMEQANSTLGAGGWGGNGVYV 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
             +  +   F+          ++    +Y  ++ +        ++     
Sbjct: 61  SGVQREYDAFITNQLRAAQTQSSGLTARYEQMSKIDNMLSTSTSSLATQM 110


>gi|326792656|ref|YP_004310477.1| flagellar hook-associated protein FlgK [Clostridium lentocellum DSM
           5427]
 gi|326543420|gb|ADZ85279.1| flagellar hook-associated protein FlgK [Clostridium lentocellum DSM
           5427]
          Length = 559

 Score = 35.2 bits (79), Expect = 2.7,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 27/70 (38%), Gaps = 2/70 (2%)

Query: 63  VKKIGVDQSTF--VEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           V  IG D S +  V +      +   +       V+   E A+M +    Y A+ + I  
Sbjct: 488 VTDIGTDGSNYSAVAKSRQTSILNIQNERQAMGGVSQDEEFANMLKYQYAYNASARMITM 547

Query: 121 SHDMMTTTLD 130
              M+ T ++
Sbjct: 548 LDGMLDTIIN 557


>gi|260772280|ref|ZP_05881196.1| flagellar hook-associated protein FlgK [Vibrio metschnikovii CIP
           69.14]
 gi|260611419|gb|EEX36622.1| flagellar hook-associated protein FlgK [Vibrio metschnikovii CIP
           69.14]
          Length = 641

 Score = 35.2 bits (79), Expect = 2.7,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 21/39 (53%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN+  E A+M +    YMA+ + ++ ++D   T L L
Sbjct: 602 SGVNLDEEAANMMKFQHAYMASSRIMQAANDTFNTILQL 640



 Score = 34.5 bits (77), Expect = 4.6,   Method: Composition-based stats.
 Identities = 20/122 (16%), Positives = 36/122 (29%), Gaps = 1/122 (0%)

Query: 11  ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQ 70
           A S L  Q   +     NIAN  T G +  S                  GV V+ +    
Sbjct: 10  AQSVLTAQRQ-LNTTGHNIANVNTEGYSRQSVIQGTNAPRQLGGQTYGMGVHVENVRRSW 68

Query: 71  STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             F  +        +A       N+++L +      + ++     +       +  T  D
Sbjct: 69  DQFAVKELNLATTNHAFNSDTEENLDMLSKLLSSVASKKIPENLNEWFDSVKSLADTPND 128

Query: 131 LL 132
           + 
Sbjct: 129 VG 130


>gi|228933022|ref|ZP_04095885.1| Flagellar hook-associated protein FlgK [Bacillus thuringiensis
           serovar andalousiensis BGSC 4AW1]
 gi|228826623|gb|EEM72394.1| Flagellar hook-associated protein FlgK [Bacillus thuringiensis
           serovar andalousiensis BGSC 4AW1]
          Length = 420

 Score = 35.2 bits (79), Expect = 2.7,   Method: Composition-based stats.
 Identities = 7/40 (17%), Positives = 20/40 (50%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            VN+  E  ++    + ++AN + I   +++  +   ++R
Sbjct: 381 GVNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSLFSIIR 420


>gi|188586014|ref|YP_001917559.1| flagellar basal-body rod protein FlgB [Natranaerobius thermophilus
           JW/NM-WN-LF]
 gi|179350701|gb|ACB84971.1| flagellar basal-body rod protein FlgB [Natranaerobius thermophilus
           JW/NM-WN-LF]
          Length = 134

 Score = 35.2 bits (79), Expect = 2.7,   Method: Composition-based stats.
 Identities = 21/127 (16%), Positives = 46/127 (36%), Gaps = 8/127 (6%)

Query: 12  NSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK-----I 66
            + L   + R ++IS NIAN  T G   G   +  +     +        ++ +     I
Sbjct: 11  GNSLNGTTKRHEVISNNIANVNTPGFKRGRVDFEEQLKEAMKADSKDIEGKITREKHIPI 70

Query: 67  GVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           G   ST   +       +  +      NV+V  E + + + +  + A  + +    + + 
Sbjct: 71  GKVDSTIEPQVRRESDSSMRN---DDNNVDVDTEMSRLTQNSLHHQALTRQLSSEFNKLR 127

Query: 127 TTLDLLR 133
           + +   R
Sbjct: 128 SAIQGGR 134


>gi|117621121|ref|YP_857337.1| flagellar hook-associated protein FlgK [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|117562528|gb|ABK39476.1| flagellar hook-associated protein FlgK [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
          Length = 666

 Score = 35.2 bits (79), Expect = 2.7,   Method: Composition-based stats.
 Identities = 15/110 (13%), Positives = 34/110 (30%), Gaps = 2/110 (1%)

Query: 26  SENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPV-- 83
           +  +A A               T + +   + +    V  +G   S    +         
Sbjct: 557 ANGLALADLQNKDLVRKSSNAGTSNDKMTFNEAYSSLVTGVGNTASQAKSQLKADETKLT 616

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            +         V++  E A++    + Y A+ Q +  +  +  T L  +R
Sbjct: 617 QSRGIFESVSGVSLEEEAANLIRYQQSYAASAQIVSTAKTIFDTLLSSVR 666



 Score = 34.8 bits (78), Expect = 3.6,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 32/91 (35%), Gaps = 5/91 (5%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
            I  SG+  Q   +Q  S NI N  + G         R  I       G+G +  +++ 
Sbjct: 6  LGIGTSGVMAQQRLLQTTSNNIVNVNSQGY-----VRERTLIYTNANGLGTGDMLTERVI 60

Query: 68 VDQSTFVEEFDPGHPVANASGIVKYPNVNVL 98
             +      D     A+++   +  N + L
Sbjct: 61 NAYAQGEVRRDTSAFYASSTRYQQLANTDSL 91


>gi|77359728|ref|YP_339303.1| flagellar hook-associated [Pseudoalteromonas haloplanktis TAC125]
 gi|76874639|emb|CAI85860.1| putative flagellar hook-associated [Pseudoalteromonas
          haloplanktis TAC125]
          Length = 670

 Score = 35.2 bits (79), Expect = 2.7,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 19/40 (47%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
              +IANSG+   +  +Q  S+NIAN  T G       +
Sbjct: 3  FNLLNIANSGIRANTDLLQTTSKNIANVNTDGYVRERTEH 42


>gi|294635619|ref|ZP_06714095.1| flagellar hook-associated protein FlgK [Edwardsiella tarda ATCC
           23685]
 gi|291091002|gb|EFE23563.1| flagellar hook-associated protein FlgK [Edwardsiella tarda ATCC
           23685]
          Length = 552

 Score = 35.2 bits (79), Expect = 2.7,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 18/39 (46%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN+  E  ++    + YMAN Q I+ +  M    L +
Sbjct: 513 SGVNLDEEYGNLVRFQQYYMANSQVIQTATTMFNALLSI 551


>gi|224825783|ref|ZP_03698887.1| flagellar hook-associated protein FlgK [Lutiella nitroferrum 2002]
 gi|224602007|gb|EEG08186.1| flagellar hook-associated protein FlgK [Lutiella nitroferrum 2002]
          Length = 457

 Score = 35.2 bits (79), Expect = 2.7,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 21/39 (53%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN   E  ++ E  ++Y AN++ I  ++ +  +TL +
Sbjct: 418 SGVNSDEEAINLVEFQKMYQANMKVIAVANQLFDSTLAI 456


>gi|170747255|ref|YP_001753515.1| flagellar basal body rod protein FlgF [Methylobacterium
           radiotolerans JCM 2831]
 gi|170653777|gb|ACB22832.1| flagellar basal body rod protein [Methylobacterium radiotolerans
           JCM 2831]
          Length = 246

 Score = 35.2 bits (79), Expect = 2.7,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 18/41 (43%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           ++  NV  ++E   + + NR Y      I +  D+  T + 
Sbjct: 200 LERSNVRPVIEMTRLMDVNRSYAMVSSMISRLDDLRGTAIR 240


>gi|319409190|emb|CBI82834.1| Flagellar basal-body rod protein flgB [Bartonella schoenbuchensis
           R1]
          Length = 128

 Score = 35.2 bits (79), Expect = 2.8,   Method: Composition-based stats.
 Identities = 28/129 (21%), Positives = 40/129 (31%), Gaps = 5/129 (3%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD  +    IAN      + R + I+ N+ANA     TPG      +             
Sbjct: 1   MDS-VNLFDIANKQADWLTVRQKAIASNVANAN----TPGYKARDVQDFPTVLQNQTISM 55

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
                  +D +    E                 NV++  E     E NR    N   +K 
Sbjct: 56  AVTNVRHIDLTDNGMEAQAIRSENIMEITHSGNNVDLEEEMRKGGEVNREMSLNTAIVKA 115

Query: 121 SHDMMTTTL 129
            H MM  T+
Sbjct: 116 FHRMMMVTV 124


>gi|300722675|ref|YP_003711965.1| flagellar hook-filament junction protein 1 [Xenorhabdus
          nematophila ATCC 19061]
 gi|297629182|emb|CBJ89778.1| flagellar biosynthesis; hook-filament junction protein 1
          [Xenorhabdus nematophila ATCC 19061]
          Length = 546

 Score = 35.2 bits (79), Expect = 2.8,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 28/70 (40%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
           + A SG+      M ++  NIAN+++      +    +   +   V     GV V  I 
Sbjct: 6  MNTAMSGINAAQVAMGVVGNNIANSKSADYNRQTTVMTQNNGTMSPVGFVGNGVVVSGIN 65

Query: 68 VDQSTFVEEF 77
           + S F+ + 
Sbjct: 66 REYSEFITQQ 75


>gi|295678057|ref|YP_003606581.1| flagellar basal-body rod protein FlgF [Burkholderia sp. CCGE1002]
 gi|295437900|gb|ADG17070.1| flagellar basal-body rod protein FlgF [Burkholderia sp. CCGE1002]
          Length = 252

 Score = 35.2 bits (79), Expect = 2.8,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 16/43 (37%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           ++  NVN +     M    R +    Q ++ +     +   +L
Sbjct: 207 LEGSNVNPVSAMVSMITNARQFQMQTQLLQNADKNDQSANQIL 249


>gi|260220025|emb|CBA27150.1| hypothetical protein Csp_A00840 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 99

 Score = 35.2 bits (79), Expect = 2.8,   Method: Composition-based stats.
 Identities = 20/127 (15%), Positives = 34/127 (26%), Gaps = 31/127 (24%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           + + + IA SGL      +   + N+AN  T G          +          SGG   
Sbjct: 1   MNSISSIALSGLNAAQTSLNASAHNVANLATEGFKRQETVQTAQ----------SGGGVT 50

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
             +    +                         +  +     +    ++ANL   K    
Sbjct: 51  TSVREASTAGN---------------------ALEQDVVTQLQAKNSFIANLAVFKTQDK 89

Query: 124 MMTTTLD 130
           M    LD
Sbjct: 90  MAGALLD 96


>gi|307721125|ref|YP_003892265.1| hypothetical protein Saut_1205 [Sulfurimonas autotrophica DSM
           16294]
 gi|306979218|gb|ADN09253.1| protein of unknown function DUF1078 domain protein [Sulfurimonas
           autotrophica DSM 16294]
          Length = 101

 Score = 35.2 bits (79), Expect = 2.8,   Method: Composition-based stats.
 Identities = 21/127 (16%), Positives = 33/127 (25%), Gaps = 29/127 (22%)

Query: 8   AHIAN--SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
            +I+N  S +      +   + N+AN  T G  P               M          
Sbjct: 1   MNISNNISSIGAHQTMLNTTANNVANVNTDGFVPKDT-----------RMSNDSNSVRAT 49

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
           I    S                        ++  E  D          N+  I+   +MM
Sbjct: 50  IRETDSNGS----------------AKSQTDLAKEIPDEIIAQDATTVNVNVIRTQDEMM 93

Query: 126 TTTLDLL 132
            T LD+ 
Sbjct: 94  GTLLDIK 100


>gi|306813297|ref|ZP_07447490.1| flagellar hook-associated protein FlgK [Escherichia coli NC101]
 gi|305854060|gb|EFM54499.1| flagellar hook-associated protein FlgK [Escherichia coli NC101]
          Length = 458

 Score = 35.2 bits (79), Expect = 2.8,   Method: Composition-based stats.
 Identities = 8/39 (20%), Positives = 20/39 (51%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             V++  E  ++    ++Y ANL+ I    ++  + L++
Sbjct: 418 SGVSMDEEAVNLITYQQIYEANLKVISAGAEIFDSVLEM 456


>gi|126653433|ref|ZP_01725529.1| flagellar basal-body rod protein [Bacillus sp. B14905]
 gi|126589789|gb|EAZ83922.1| flagellar basal-body rod protein [Bacillus sp. B14905]
          Length = 67

 Score = 35.2 bits (79), Expect = 2.8,   Method: Composition-based stats.
 Identities = 12/64 (18%), Positives = 24/64 (37%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +    +   +G+  Q  R +++S N+ANA T G        R         +  +  + +
Sbjct: 1  MFKGFYTVATGMITQQRRTELLSNNLANANTPGFKADQSTIRSFPDMLMSSIGKTNALPI 60

Query: 64 KKIG 67
           K  
Sbjct: 61 NKQV 64


>gi|299531285|ref|ZP_07044695.1| flagellar basal-body rod protein FlgF [Comamonas testosteroni S44]
 gi|298720692|gb|EFI61639.1| flagellar basal-body rod protein FlgF [Comamonas testosteroni S44]
          Length = 246

 Score = 35.2 bits (79), Expect = 2.8,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 18/43 (41%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           ++  NVN +     M   +R +   ++ ++ +     +   LL
Sbjct: 200 IEGSNVNSVETMVGMIAASRQFEQQMKLLQTAETNDKSASQLL 242


>gi|264676571|ref|YP_003276477.1| flagellar basal-body rod protein FlgF [Comamonas testosteroni
           CNB-2]
 gi|262207083|gb|ACY31181.1| flagellar basal-body rod protein FlgF [Comamonas testosteroni
           CNB-2]
          Length = 246

 Score = 35.2 bits (79), Expect = 2.8,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 18/43 (41%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           ++  NVN +     M   +R +   ++ ++ +     +   LL
Sbjct: 200 IEGSNVNSVETMVGMIAASRQFEQQMKLLQTAETNDKSASQLL 242


>gi|23015641|ref|ZP_00055411.1| COG1749: Flagellar hook protein FlgE [Magnetospirillum
          magnetotacticum MS-1]
          Length = 804

 Score = 35.2 bits (79), Expect = 2.8,   Method: Composition-based stats.
 Identities = 18/59 (30%), Positives = 24/59 (40%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
            L  +     SGLA QS+ M  IS+NI N  TTG       ++        +   S G
Sbjct: 1  MSLYGALFSGVSGLASQSSAMGAISDNITNVNTTGYKGAKVNFQTLVTKQVSLTSYSPG 59


>gi|326939385|gb|AEA15281.1| flagellar basal body rod protein FlgG [Bacillus thuringiensis
           serovar chinensis CT-43]
          Length = 257

 Score = 35.2 bits (79), Expect = 2.8,   Method: Composition-based stats.
 Identities = 9/64 (14%), Positives = 25/64 (39%), Gaps = 1/64 (1%)

Query: 71  STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT-TL 129
           +       P       + +++  NV++  E AD+    ++  A+ + +     +      
Sbjct: 194 AEGNIANLPNGTGIVKNHMLENSNVDMTKEMADLMTDQKMIQASQRVMTSFDKIYEKEAN 253

Query: 130 DLLR 133
           ++LR
Sbjct: 254 EILR 257


>gi|310816851|ref|YP_003964815.1| flagellar hook-associated protein [Ketogulonicigenium vulgare Y25]
 gi|308755586|gb|ADO43515.1| flagellar hook-associated protein [Ketogulonicigenium vulgare Y25]
          Length = 468

 Score = 35.2 bits (79), Expect = 2.8,   Method: Composition-based stats.
 Identities = 8/41 (19%), Positives = 16/41 (39%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
               V+   E   +      Y AN + ++    M+ T L++
Sbjct: 428 AAQGVDTDREMQKLLLIETSYAANAKVLQAVDGMLQTLLEI 468


>gi|303240291|ref|ZP_07326810.1| flagellar basal-body rod protein FlgB [Acetivibrio cellulolyticus
           CD2]
 gi|302592201|gb|EFL61930.1| flagellar basal-body rod protein FlgB [Acetivibrio cellulolyticus
           CD2]
          Length = 137

 Score = 35.2 bits (79), Expect = 2.8,   Method: Composition-based stats.
 Identities = 25/122 (20%), Positives = 43/122 (35%), Gaps = 3/122 (2%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK---IGVDQS 71
           L   + R ++I++NIAN  T G    +  +  +            G R           S
Sbjct: 16  LDATATRNEVIAQNIANVDTPGYKRKTVSFEEQLSDAISKNSSFKGRRTDPRHIAIGGSS 75

Query: 72  TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
               + +     ++    +   NV++  E A M E N  Y   +Q I  S   M + +  
Sbjct: 76  ADEVKINVSEDKSSLDMRLDGNNVDIENEMAQMAENNIRYEVLIQRISGSFSRMKSVIKE 135

Query: 132 LR 133
            R
Sbjct: 136 GR 137


>gi|323191378|gb|EFZ76640.1| flagellar hook-associated protein FlgK [Escherichia coli RN587/1]
          Length = 458

 Score = 35.2 bits (79), Expect = 2.9,   Method: Composition-based stats.
 Identities = 8/39 (20%), Positives = 20/39 (51%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             V++  E  ++    ++Y ANL+ I    ++  + L++
Sbjct: 418 SGVSMDEEAVNLITYQQIYEANLKVISAGAEIFDSVLEM 456


>gi|313650466|gb|EFS14873.1| flagellar hook-associated 1 domain protein [Shigella flexneri 2a
           str. 2457T]
 gi|332758242|gb|EGJ88565.1| flagellar hook-associated protein 1 domain protein [Shigella
           flexneri 4343-70]
 gi|332759634|gb|EGJ89939.1| flagellar hook-associated protein 1 domain protein [Shigella
           flexneri 2747-71]
 gi|332761428|gb|EGJ91712.1| flagellar hook-associated protein 1 domain protein [Shigella
           flexneri K-671]
 gi|332767690|gb|EGJ97883.1| flagella basal body rod family protein [Shigella flexneri 2930-71]
 gi|333005757|gb|EGK25275.1| flagellar hook-associated protein 1 domain protein [Shigella
           flexneri K-218]
 gi|333008286|gb|EGK27760.1| flagellar hook-associated protein 1 domain protein [Shigella
           flexneri K-272]
 gi|333019422|gb|EGK38705.1| flagellar hook-associated protein 1 domain protein [Shigella
           flexneri K-304]
 gi|333019776|gb|EGK39048.1| flagellar hook-associated protein 1 domain protein [Shigella
           flexneri K-227]
          Length = 274

 Score = 35.2 bits (79), Expect = 2.9,   Method: Composition-based stats.
 Identities = 16/110 (14%), Positives = 36/110 (32%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           + +  + A SGL    A +   S NI++    G T  +    +   +         GV V
Sbjct: 1   MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGGWVGNGVYV 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
             +  +  TF+          ++    +Y  ++ +        ++     
Sbjct: 61  SGVQREYDTFITNQLRAAQTQSSGLTARYEQMSKIDNMLSTSTSSLATQM 110


>gi|331666552|ref|ZP_08367426.1| flagellar hook-associated protein FlgK [Escherichia coli TA271]
 gi|331065776|gb|EGI37660.1| flagellar hook-associated protein FlgK [Escherichia coli TA271]
          Length = 458

 Score = 35.2 bits (79), Expect = 2.9,   Method: Composition-based stats.
 Identities = 8/39 (20%), Positives = 20/39 (51%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             V++  E  ++    ++Y ANL+ I    ++  + L++
Sbjct: 418 SGVSMDEEAVNLITYQQIYEANLKVISAGAEIFDSVLEM 456


>gi|307313513|ref|ZP_07593134.1| flagellar hook-associated protein FlgK [Escherichia coli W]
 gi|306906681|gb|EFN37192.1| flagellar hook-associated protein FlgK [Escherichia coli W]
 gi|315059548|gb|ADT73875.1| flagellar hook-filament junction protein 1 [Escherichia coli W]
 gi|323181553|gb|EFZ66973.1| flagellar hook-associated protein FlgK [Escherichia coli 1357]
 gi|323379893|gb|ADX52161.1| flagellar hook-associated protein FlgK [Escherichia coli KO11]
          Length = 458

 Score = 35.2 bits (79), Expect = 2.9,   Method: Composition-based stats.
 Identities = 8/39 (20%), Positives = 20/39 (51%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             V++  E  ++    ++Y ANL+ I    ++  + L++
Sbjct: 418 SGVSMDEEAVNLITYQQIYEANLKVISAGAEIFDSVLEM 456


>gi|238799104|ref|ZP_04642560.1| Flagellar basal-body rod protein flgB [Yersinia mollaretii ATCC
           43969]
 gi|238717051|gb|EEQ08911.1| Flagellar basal-body rod protein flgB [Yersinia mollaretii ATCC
           43969]
          Length = 137

 Score = 35.2 bits (79), Expect = 2.9,   Method: Composition-based stats.
 Identities = 24/132 (18%), Positives = 42/132 (31%), Gaps = 5/132 (3%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTG-DTPGSDPYRRKTISFEEVMHGSGG 60
           D L  +       L +++ R +I+S NIANA T G      D   +     E+      G
Sbjct: 3   DKLDGALRFQQEALNLRAQRQEILSSNIANADTPGFQARDIDFSSQLQKVMEQGRASGTG 62

Query: 61  VRVKKIGVDQSTFVEEFDPG---HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           V +               P             +    V++  E  +  + +  Y  +L  
Sbjct: 63  VSLSLTSARHIPASTVQPPDLDLLFRVPDQPSMDGNTVDMDRERTNFADNSLKYQTDLTV 122

Query: 118 IKQS-HDMMTTT 128
           I      M++  
Sbjct: 123 ISSQIKGMLSVL 134


>gi|260853472|ref|YP_003227363.1| putative lateral flagellar hook-filament junction protein
           [Escherichia coli O26:H11 str. 11368]
 gi|257752121|dbj|BAI23623.1| predicted lateral flagellar hook-filament junction protein
           [Escherichia coli O26:H11 str. 11368]
 gi|323158097|gb|EFZ44196.1| flagellar hook-associated protein FlgK [Escherichia coli EPECa14]
          Length = 458

 Score = 35.2 bits (79), Expect = 2.9,   Method: Composition-based stats.
 Identities = 8/39 (20%), Positives = 20/39 (51%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             V++  E  ++    ++Y ANL+ I    ++  + L++
Sbjct: 418 SGVSMDEEAVNLITYQQIYEANLKVISAGAEIFDSVLEM 456


>gi|146341929|ref|YP_001206977.1| putative flagellar hook-associated protein FlgK [Bradyrhizobium sp.
           ORS278]
 gi|146194735|emb|CAL78760.1| putative flagellar hook-associated protein 1 (HAP1, FlgK protein)
           [Bradyrhizobium sp. ORS278]
          Length = 621

 Score = 35.2 bits (79), Expect = 2.9,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 16/42 (38%)

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
                 VN+  E +++ +    Y AN   +     MM + L 
Sbjct: 577 FQSTAGVNMDSEMSNLIQVQNTYAANAHIMSVVQSMMQSLLQ 618


>gi|332187895|ref|ZP_08389628.1| flagellar basal-body rod protein FlgB [Sphingomonas sp. S17]
 gi|332012056|gb|EGI54128.1| flagellar basal-body rod protein FlgB [Sphingomonas sp. S17]
          Length = 115

 Score = 35.2 bits (79), Expect = 2.9,   Method: Composition-based stats.
 Identities = 23/122 (18%), Positives = 35/122 (28%), Gaps = 16/122 (13%)

Query: 8   AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
             I  + L V+  RM +++ NIANA T G         R       +    GG + + I 
Sbjct: 7   FGIHGAALEVRGQRMGVLASNIANASTPG------FKARDIDFKAALAAVEGGQQDQGIA 60

Query: 68  VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
                                 +    V +  E     E    Y   L  +      +T 
Sbjct: 61  ----------KAMKYRVPLETSLDGNTVELAEEQTAFAENAVQYQTTLSFLNGRISTITR 110

Query: 128 TL 129
            L
Sbjct: 111 AL 112


>gi|296534169|ref|ZP_06896661.1| flagellar hook-associated protein FlgK [Roseomonas cervicalis ATCC
           49957]
 gi|296265505|gb|EFH11638.1| flagellar hook-associated protein FlgK [Roseomonas cervicalis ATCC
           49957]
          Length = 500

 Score = 35.2 bits (79), Expect = 2.9,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 16/40 (40%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            V+   E A+M      Y AN + +     M    LD +R
Sbjct: 461 GVDTDAELANMVALQNAYSANARVMSAVQSMWDALLDAVR 500


>gi|222084859|ref|YP_002543388.1| flagellar basal-body rod protein [Agrobacterium radiobacter K84]
 gi|221722307|gb|ACM25463.1| flagellar basal-body rod protein [Agrobacterium radiobacter K84]
          Length = 244

 Score = 35.2 bits (79), Expect = 2.9,   Method: Composition-based stats.
 Identities = 17/100 (17%), Positives = 34/100 (34%)

Query: 30  ANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGI 89
           A   ++  T   +  +   I         G +R    GV  +   +       +  A G 
Sbjct: 138 APTVSSNGTITQNDKQVGQIGLYTSDVSKGFLRYNNSGVLPTDTPQPVIDRSNIGVAQGY 197

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
           ++  NVN L E  ++ E +R +         S   ++  +
Sbjct: 198 LENSNVNGLREMTELIEVSRAFDNITSLTNSSESTLSEAI 237


>gi|110677662|ref|YP_680669.1| flagellar basal body rod protein FlgF [Roseobacter denitrificans
           OCh 114]
 gi|109453778|gb|ABG29983.1| flagellar basal-body rod protein FlgF, putative [Roseobacter
           denitrificans OCh 114]
          Length = 237

 Score = 35.2 bits (79), Expect = 2.9,   Method: Composition-based stats.
 Identities = 8/44 (18%), Positives = 17/44 (38%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
              V+  NVN +++   M E  R Y      ++   + +   + 
Sbjct: 190 QSFVENSNVNPILQLTRMIEVQRAYELGASFVEAEDERVRQAMR 233


>gi|222147590|ref|YP_002548547.1| flagellar hook-associated protein FlgK [Agrobacterium vitis S4]
 gi|221734578|gb|ACM35541.1| flagellar-associated protein [Agrobacterium vitis S4]
          Length = 484

 Score = 35.2 bits (79), Expect = 3.0,   Method: Composition-based stats.
 Identities = 8/46 (17%), Positives = 20/46 (43%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
                    VN+  E + M +  + Y A+ + +    +M+ + L++
Sbjct: 438 TEAYQNKTGVNLDEELSKMLDIEQSYKASTKLMNAVDEMLKSLLEI 483


>gi|206970637|ref|ZP_03231589.1| putative flagellar basal-body rod protein [Bacillus cereus AH1134]
 gi|206734273|gb|EDZ51443.1| putative flagellar basal-body rod protein [Bacillus cereus AH1134]
          Length = 257

 Score = 35.2 bits (79), Expect = 3.0,   Method: Composition-based stats.
 Identities = 9/64 (14%), Positives = 25/64 (39%), Gaps = 1/64 (1%)

Query: 71  STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT-TL 129
           +       P       + +++  NV++  E AD+    ++  A+ + +     +      
Sbjct: 194 AEGNIANLPNGTGIVKNHMLENSNVDMTKEMADLMTDQKMIQASQRVMTSFDKIYEKEAN 253

Query: 130 DLLR 133
           ++LR
Sbjct: 254 EILR 257


>gi|315928464|gb|EFV07776.1| flagellar hook protein flgE [Campylobacter jejuni subsp. jejuni
          DFVF1099]
          Length = 437

 Score = 35.2 bits (79), Expect = 3.0,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 25/72 (34%), Gaps = 4/72 (5%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR----RKTISFEEVMHGSG 59
          ++ S     SGL      M +   NI+N  TTG       +     +          G G
Sbjct: 1  MMRSLWSGVSGLQAHQVAMDVEGNNISNVNTTGFKYSRADFGTMFSQTVKIATAPTDGRG 60

Query: 60 GVRVKKIGVDQS 71
          G    +IG+  S
Sbjct: 61 GSNPLQIGLGVS 72


>gi|293408373|ref|ZP_06652212.1| flagellar hook-associated protein FlgK [Escherichia coli B354]
 gi|291471551|gb|EFF14034.1| flagellar hook-associated protein FlgK [Escherichia coli B354]
          Length = 458

 Score = 35.2 bits (79), Expect = 3.0,   Method: Composition-based stats.
 Identities = 8/39 (20%), Positives = 20/39 (51%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             V++  E  ++    ++Y ANL+ I    ++  + L++
Sbjct: 418 SGVSMDEEAVNLITYQQIYEANLKVISAGAEIFDSVLEM 456


>gi|77457728|ref|YP_347233.1| flagellar basal body rod protein FlgF [Pseudomonas fluorescens
           Pf0-1]
 gi|77381731|gb|ABA73244.1| flagellar basal-body rod protein [Pseudomonas fluorescens Pf0-1]
          Length = 246

 Score = 35.2 bits (79), Expect = 3.0,   Method: Composition-based stats.
 Identities = 13/70 (18%), Positives = 30/70 (42%), Gaps = 3/70 (4%)

Query: 67  GVDQSTFVEEFDPGHPVANAS---GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
           G+D S + ++  P    AN     G ++  NVN + E   +    + +  +++ +  + D
Sbjct: 175 GLDGSIYTKDGQPAPADANVKLVSGFLESSNVNAVEEMTSVLALAKQFELHVKMMNTAKD 234

Query: 124 MMTTTLDLLR 133
                  +L+
Sbjct: 235 DDQAMARVLQ 244


>gi|257095353|ref|YP_003168994.1| flagellar hook-associated protein FlgK [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257047877|gb|ACV37065.1| flagellar hook-associated protein FlgK [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 681

 Score = 35.2 bits (79), Expect = 3.0,   Method: Composition-based stats.
 Identities = 14/95 (14%), Positives = 25/95 (26%)

Query: 8   AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
              + +G+      +Q    NIANA T G +                     G  V  I 
Sbjct: 6   IGSSLTGINAAQLGLQTTEHNIANASTPGFSRQRTVQASNPGVQSGAGFIGQGTHVATIE 65

Query: 68  VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETA 102
              S F+ +       + +        +  +    
Sbjct: 66  RMYSRFLSDQVNRSQASASELASYSAQIAQIDNML 100


>gi|242238970|ref|YP_002987151.1| flagellar basal body rod protein [Dickeya dadantii Ech703]
 gi|242131027|gb|ACS85329.1| flagellar basal body rod protein [Dickeya dadantii Ech703]
          Length = 251

 Score = 35.2 bits (79), Expect = 3.0,   Method: Composition-based stats.
 Identities = 20/113 (17%), Positives = 34/113 (30%), Gaps = 4/113 (3%)

Query: 24  IISENIANA---RTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPG 80
            IS N   A           +     K +  +      G   +  +    S  V    P 
Sbjct: 136 TISANGTVASLGDGDSPNTVAQVGALKLVKGDSTQLVRGDDGLFHVSPAASQQVGNALPA 195

Query: 81  HPV-ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
            P      G+++  NVN +    DM  + R +   ++ I        +   LL
Sbjct: 196 DPTVRVMPGVLEGSNVNTVESLVDMIGSARRFEMQMKVIASVDQNAESANKLL 248


>gi|228938885|ref|ZP_04101485.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis
           serovar berliner ATCC 10792]
 gi|228971766|ref|ZP_04132387.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
 gi|228978375|ref|ZP_04138752.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis
           Bt407]
 gi|228781392|gb|EEM29593.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis
           Bt407]
 gi|228787856|gb|EEM35814.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
 gi|228820734|gb|EEM66759.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis
           serovar berliner ATCC 10792]
          Length = 249

 Score = 35.2 bits (79), Expect = 3.0,   Method: Composition-based stats.
 Identities = 9/64 (14%), Positives = 25/64 (39%), Gaps = 1/64 (1%)

Query: 71  STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT-TL 129
           +       P       + +++  NV++  E AD+    ++  A+ + +     +      
Sbjct: 186 AEGNIANLPNGTGIVKNHMLENSNVDMTKEMADLMTDQKMIQASQRVMTSFDKIYEKEAN 245

Query: 130 DLLR 133
           ++LR
Sbjct: 246 EILR 249


>gi|15639647|ref|NP_219097.1| flagellar hook-associated protein FlgK [Treponema pallidum subsp.
           pallidum str. Nichols]
 gi|189025885|ref|YP_001933657.1| flagellar hook-associated protein FlgK [Treponema pallidum subsp.
           pallidum SS14]
 gi|3322960|gb|AAC65634.1| flagellar hook-associated protein 1 (flgK) [Treponema pallidum
           subsp. pallidum str. Nichols]
 gi|189018460|gb|ACD71078.1| flagellar hook-associated protein 1 [Treponema pallidum subsp.
           pallidum SS14]
 gi|291060027|gb|ADD72762.1| flagellar hook-associated protein FlgK [Treponema pallidum subsp.
           pallidum str. Chicago]
          Length = 625

 Score = 35.2 bits (79), Expect = 3.0,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 20/38 (52%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             VN+  E AD+ +    Y A+ + I   ++M+ T ++
Sbjct: 584 SGVNIDEELADIIKFQHGYNASARFIAAVNEMLDTVIN 621


>gi|296102902|ref|YP_003613048.1| flagellar hook-associated protein FlgK [Enterobacter cloacae
          subsp. cloacae ATCC 13047]
 gi|295057361|gb|ADF62099.1| flagellar hook-associated protein FlgK [Enterobacter cloacae
          subsp. cloacae ATCC 13047]
          Length = 545

 Score = 35.2 bits (79), Expect = 3.1,   Method: Composition-based stats.
 Identities = 15/96 (15%), Positives = 34/96 (35%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          + +  + A SGL+   A +  +S NI++    G T  +        +         GV V
Sbjct: 1  MSSLINSAMSGLSAAQAALNTVSNNISSYNVAGYTRQTTVLGASNSTLTGGGWVGNGVYV 60

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
            +  +   F+          ++    +Y  ++ + 
Sbjct: 61 SGVQREYDAFITNQLRAAQTQSSGLTTRYQQMSKID 96



 Score = 34.5 bits (77), Expect = 4.8,   Method: Composition-based stats.
 Identities = 14/110 (12%), Positives = 37/110 (33%), Gaps = 2/110 (1%)

Query: 24  IISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPV 83
             + N   +         D    K +   +  + +    V  +G   +      +    V
Sbjct: 435 ASASNGGESDNRNGQKLLDLQNSKVVGGNKTFNDAYASLVSTVGSSTAALKTSSETKANV 494

Query: 84  ANASGIVKYP--NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           A      +     VN+  E  +++   + Y+AN Q ++ +  +    +++
Sbjct: 495 ATQLTKQQQSISGVNLDEEYGNLQRYQQYYLANAQVLQTASTLFDAIINI 544


>gi|241766917|ref|ZP_04764723.1| flagellar basal-body rod protein FlgB [Acidovorax delafieldii 2AN]
 gi|241362621|gb|EER58469.1| flagellar basal-body rod protein FlgB [Acidovorax delafieldii 2AN]
          Length = 147

 Score = 35.2 bits (79), Expect = 3.1,   Method: Composition-based stats.
 Identities = 21/143 (14%), Positives = 41/143 (28%), Gaps = 14/143 (9%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR---RKTISFEEVMHGS 58
           D +        + L +++ R + I+ NIANA T G       +    R+          +
Sbjct: 3   DKMTDRLDFHGNALMLRAERQRAIASNIANADTPGYVARDFNFAETLREATGAGSATSAA 62

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVAN-----------ASGIVKYPNVNVLVETADMRET 107
                       +       P   +                 +    V++  E A+  + 
Sbjct: 63  HLASGGAGTAGTTDPRHIPLPTASLGGGARGTLGYGVQTQPSLDNNTVDLDRERANFVDN 122

Query: 108 NRLYMANLQTIKQSHDMMTTTLD 130
              Y A L+ I      M + + 
Sbjct: 123 AVRYEATLRFINGQAKTMLSAIQ 145


>gi|219684499|ref|ZP_03539442.1| flagellar hook-associated protein FlgK [Borrelia garinii PBr]
 gi|219671861|gb|EED28915.1| flagellar hook-associated protein FlgK [Borrelia garinii PBr]
          Length = 627

 Score = 35.2 bits (79), Expect = 3.1,   Method: Composition-based stats.
 Identities = 13/80 (16%), Positives = 24/80 (30%), Gaps = 7/80 (8%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDP-------YRRKTISFEE 53
          MD   +   I    L      M  +  N++NA   G +            Y  +    ++
Sbjct: 1  MDSTFSGIEIGKRSLFAHKDAMNTVGHNLSNATKPGYSRQRVIMKTEIPLYAPQLNRAKK 60

Query: 54 VMHGSGGVRVKKIGVDQSTF 73
                G+ V+ I   +   
Sbjct: 61 QGQLGQGIVVQSIDRVKDEL 80


>gi|30019815|ref|NP_831446.1| flagellar basal body rod protein FlgG [Bacillus cereus ATCC 14579]
 gi|218235496|ref|YP_002366457.1| flagellar basal body rod protein FlgG [Bacillus cereus B4264]
 gi|218896706|ref|YP_002445117.1| putative flagellar basal-body rod protein [Bacillus cereus G9842]
 gi|228907405|ref|ZP_04071263.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis IBL
           200]
 gi|228952155|ref|ZP_04114247.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis
           serovar kurstaki str. T03a001]
 gi|228958053|ref|ZP_04119788.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis
           serovar pakistani str. T13001]
 gi|229043528|ref|ZP_04191237.1| Flagellar basal-body rod protein flgG [Bacillus cereus AH676]
 gi|229109228|ref|ZP_04238827.1| Flagellar basal-body rod protein flgG [Bacillus cereus Rock1-15]
 gi|229127099|ref|ZP_04256096.1| Flagellar basal-body rod protein flgG [Bacillus cereus BDRD-Cer4]
 gi|229149977|ref|ZP_04278203.1| Flagellar basal-body rod protein flgG [Bacillus cereus m1550]
 gi|29895360|gb|AAP08647.1| Flagellar basal-body rod protein flgG [Bacillus cereus ATCC 14579]
 gi|218163453|gb|ACK63445.1| putative flagellar basal-body rod protein [Bacillus cereus B4264]
 gi|218540813|gb|ACK93207.1| putative flagellar basal-body rod protein [Bacillus cereus G9842]
 gi|228633499|gb|EEK90102.1| Flagellar basal-body rod protein flgG [Bacillus cereus m1550]
 gi|228656215|gb|EEL12056.1| Flagellar basal-body rod protein flgG [Bacillus cereus BDRD-Cer4]
 gi|228674238|gb|EEL29483.1| Flagellar basal-body rod protein flgG [Bacillus cereus Rock1-15]
 gi|228725750|gb|EEL76998.1| Flagellar basal-body rod protein flgG [Bacillus cereus AH676]
 gi|228801570|gb|EEM48452.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis
           serovar pakistani str. T13001]
 gi|228807509|gb|EEM54036.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis
           serovar kurstaki str. T03a001]
 gi|228852266|gb|EEM97062.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis IBL
           200]
          Length = 257

 Score = 35.2 bits (79), Expect = 3.1,   Method: Composition-based stats.
 Identities = 9/64 (14%), Positives = 25/64 (39%), Gaps = 1/64 (1%)

Query: 71  STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT-TL 129
           +       P       + +++  NV++  E AD+    ++  A+ + +     +      
Sbjct: 194 AEGNIANLPNGTGIVKNHMLENSNVDMTKEMADLMTDQKMIQASQRVMTSFDKIYEKEAN 253

Query: 130 DLLR 133
           ++LR
Sbjct: 254 EILR 257


>gi|208434303|ref|YP_002265969.1| flagellar basal-body rod protein [Helicobacter pylori G27]
 gi|208432232|gb|ACI27103.1| flagellar basal-body rod protein [Helicobacter pylori G27]
          Length = 269

 Score = 35.2 bits (79), Expect = 3.1,   Method: Composition-based stats.
 Identities = 11/60 (18%), Positives = 21/60 (35%), Gaps = 1/60 (1%)

Query: 72  TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ-SHDMMTTTLD 130
                       A    +++  NVN + E + + E NR      + +K    DM    ++
Sbjct: 204 QGEGVHQVSDSGALKQYMLEKSNVNAVREMSALIEINRFLDMYSKVLKTHQDDMNAEAIN 263


>gi|114765245|ref|ZP_01444377.1| hypothetical protein 1100011001307_R2601_00410 [Pelagibaca
          bermudensis HTCC2601]
 gi|114542380|gb|EAU45408.1| hypothetical protein R2601_00410 [Roseovarius sp. HTCC2601]
          Length = 249

 Score = 35.2 bits (79), Expect = 3.1,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 30/77 (38%), Gaps = 2/77 (2%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +  S ++A S L     ++ + + NIANA ++G       +       +  + G G   V
Sbjct: 1  MDNSTYVAISKLTALERQLDVTANNIANANSSGFKAERVLFETYLQKDDASLAGEGTNYV 60

Query: 64 --KKIGVDQSTFVEEFD 78
            +   VD +  V    
Sbjct: 61 LDRGSYVDDTPGVVVQT 77


>gi|23016628|ref|ZP_00056382.1| COG1815: Flagellar basal body protein [Magnetospirillum
           magnetotacticum MS-1]
          Length = 157

 Score = 35.2 bits (79), Expect = 3.1,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 49/133 (36%), Gaps = 9/133 (6%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M   +    +A + +   + R ++++ NIANA     TP   P   K + F++V+ G+  
Sbjct: 25  MYDDLGIFKMAKAQMDWIAQRQEVLAGNIANAN----TPRYLPKDLKDLDFKQVLAGTTE 80

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP-----NVNVLVETADMRETNRLYMANL 115
             V     +    V E  P    A               V +  + A + + N  Y A  
Sbjct: 81  PEVGAATTNAKHIVPEVTPSPFKAVTQRRTYESTPDGNAVILEEQMAKLGDANSKYNAAA 140

Query: 116 QTIKQSHDMMTTT 128
              ++   M+ T 
Sbjct: 141 ALFQKYQKMIKTA 153


>gi|328947991|ref|YP_004365328.1| flagellar basal-body rod protein FlgB [Treponema succinifaciens DSM
           2489]
 gi|328448315|gb|AEB14031.1| flagellar basal-body rod protein FlgB [Treponema succinifaciens DSM
           2489]
          Length = 139

 Score = 35.2 bits (79), Expect = 3.1,   Method: Composition-based stats.
 Identities = 18/126 (14%), Positives = 35/126 (27%), Gaps = 7/126 (5%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY-------RRKTISFEE 53
           M+    S  + +  L V+S R Q+ + NIAN+        S  +            +   
Sbjct: 1   MNSFSNSVDLLHRALDVESLRYQVTANNIANSEVANFKRQSVNFESELKKAFVSRDNEHS 60

Query: 54  VMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
               +              + +           S      NV+   E  ++ +    Y  
Sbjct: 61  SFRMATNDARHIQSEVPRDWRDVEPRRVSDYTTSSKANGNNVDAEQEAMNVVQIQMQYRL 120

Query: 114 NLQTIK 119
             Q + 
Sbjct: 121 LTQLMN 126


>gi|293395589|ref|ZP_06639872.1| flagellar hook-associated protein FlgK [Serratia odorifera DSM
           4582]
 gi|291421908|gb|EFE95154.1| flagellar hook-associated protein FlgK [Serratia odorifera DSM
           4582]
          Length = 549

 Score = 35.2 bits (79), Expect = 3.1,   Method: Composition-based stats.
 Identities = 15/95 (15%), Positives = 29/95 (30%)

Query: 8   AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
            + A SGL      +  +S NI+N    G    +    +             GV V  + 
Sbjct: 6   INTAMSGLNAAQVALSTVSNNISNYNVAGYNRQTAILAQNGGMGTMSGFIGNGVTVTSVN 65

Query: 68  VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETA 102
            + + F+     G      +    +  V+ +    
Sbjct: 66  REYNQFITNQLRGAQSQAGAHDAYFEKVSQIDNLL 100


>gi|210134550|ref|YP_002300989.1| flagellar basal-body rod protein [Helicobacter pylori P12]
 gi|210132518|gb|ACJ07509.1| flagellar basal-body rod protein [Helicobacter pylori P12]
          Length = 269

 Score = 35.2 bits (79), Expect = 3.1,   Method: Composition-based stats.
 Identities = 11/60 (18%), Positives = 21/60 (35%), Gaps = 1/60 (1%)

Query: 72  TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ-SHDMMTTTLD 130
                       A    +++  NVN + E + + E NR      + +K    DM    ++
Sbjct: 204 QGEGVHQVSDSGALRQYMLEKSNVNAVREMSALIEINRFLDMYSKVLKTHQDDMNAEAIN 263


>gi|170768131|ref|ZP_02902584.1| flagellar hook-associated protein FlgK [Escherichia albertii
           TW07627]
 gi|170122897|gb|EDS91828.1| flagellar hook-associated protein FlgK [Escherichia albertii
           TW07627]
          Length = 547

 Score = 35.2 bits (79), Expect = 3.1,   Method: Composition-based stats.
 Identities = 15/110 (13%), Positives = 35/110 (31%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           + +  + A SGL    A +   S NI++    G T  +    +   +         GV V
Sbjct: 1   MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQAKSTLGAGGWVGNGVYV 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
             +  +   F+          ++    +Y  ++ +        ++     
Sbjct: 61  SGVQREYDAFITNQLHAAQTQSSGLTSRYEQMSKIDNMLSGSTSSLATQM 110


>gi|85058012|ref|YP_453714.1| flagellar basal-body rod protein FlgF [Sodalis glossinidius str.
           'morsitans']
 gi|84778532|dbj|BAE73309.1| flagellar basal-body rod protein FlgF [Sodalis glossinidius str.
           'morsitans']
          Length = 252

 Score = 35.2 bits (79), Expect = 3.1,   Method: Composition-based stats.
 Identities = 9/47 (19%), Positives = 17/47 (36%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
             G  +  NV+ +    +M    R +   ++ I   +D       LL
Sbjct: 203 TPGAFEGSNVSPVQTMVEMIGNARSFEMQMKVISNVNDNARAGNQLL 249


>gi|148256817|ref|YP_001241402.1| putative flagellar hook-associated protein FlgK [Bradyrhizobium sp.
           BTAi1]
 gi|146408990|gb|ABQ37496.1| putative flagellar hook-associated protein 1 (HAP1, FlgK protein)
           [Bradyrhizobium sp. BTAi1]
          Length = 611

 Score = 35.2 bits (79), Expect = 3.2,   Method: Composition-based stats.
 Identities = 9/38 (23%), Positives = 16/38 (42%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             VN+  E +++ +    Y AN   +     MM + L 
Sbjct: 571 AGVNMDSEMSNLIQVQNTYSANAHIMSVVQSMMQSLLQ 608


>gi|307748585|gb|ADN91855.1| Flagellar hook protein [Campylobacter jejuni subsp. jejuni M1]
          Length = 690

 Score = 35.2 bits (79), Expect = 3.2,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 25/72 (34%), Gaps = 4/72 (5%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR----RKTISFEEVMHGSG 59
          ++ S     SGL      M +   NI+N  TTG       +     +          G G
Sbjct: 1  MMRSLWSGVSGLQAHQVAMDVEGNNISNVNTTGFKYSRADFGTMFSQTVKIATAPTDGRG 60

Query: 60 GVRVKKIGVDQS 71
          G    +IG+  S
Sbjct: 61 GSNPLQIGLGVS 72


>gi|224372658|ref|YP_002607030.1| flagellar basal-body rod protein [Nautilia profundicola AmH]
 gi|223589304|gb|ACM93040.1| flagellar basal-body rod protein [Nautilia profundicola AmH]
          Length = 261

 Score = 35.2 bits (79), Expect = 3.2,   Method: Composition-based stats.
 Identities = 16/97 (16%), Positives = 29/97 (29%), Gaps = 7/97 (7%)

Query: 31  NARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIV 90
           N     +      ++   I     +   G      I    +            +   G +
Sbjct: 161 NGNIYQNNEKVATFKIVKIDNLNTLKKVGDNMFDFIPDTATI-------DTKNSTLQGFL 213

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
           +  NVN + E  D+ ETNRL     + +    D +  
Sbjct: 214 EKSNVNPIREMTDLIETNRLVEQYQKVMTTFMDDLNR 250


>gi|160896082|ref|YP_001561664.1| flagellar basal-body rod protein FlgB [Delftia acidovorans SPH-1]
 gi|160361666|gb|ABX33279.1| flagellar basal-body rod protein FlgB [Delftia acidovorans SPH-1]
          Length = 160

 Score = 35.2 bits (79), Expect = 3.2,   Method: Composition-based stats.
 Identities = 22/133 (16%), Positives = 41/133 (30%), Gaps = 4/133 (3%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
           D +       +  L +++ R + I+ NIANA T G       +R    +           
Sbjct: 26  DKMTERLDFQSKALVLRAERQRAIASNIANADTPGYVARDFNFREALTAVTSGPSPMTLA 85

Query: 62  RVKKIGVDQSTFVEEFDPGHPV----ANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
            V + G                      A   +    V++  E A+  +    Y A L+ 
Sbjct: 86  SVSQGGHIPLPAAASGQSAQSHLGYSVQAQTNMDNNTVDLDRERANFVDNAVRYEATLRF 145

Query: 118 IKQSHDMMTTTLD 130
           +      M + + 
Sbjct: 146 LNGQAKTMLSAIQ 158


>gi|109947349|ref|YP_664577.1| flagellar basal-body rod protein FlgG [Helicobacter acinonychis
           str. Sheeba]
 gi|109714570|emb|CAJ99578.1| flagellar basal-body rod protein FlgG [Helicobacter acinonychis
           str. Sheeba]
          Length = 269

 Score = 35.2 bits (79), Expect = 3.2,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 43/123 (34%), Gaps = 4/123 (3%)

Query: 11  ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVD- 69
           + SGL  Q   M + +  I      G    SD   +       ++  S    +KKIG + 
Sbjct: 142 SRSGLNEQGGIMLMPNTEI-EVDQNGGITFSDNEAQIQAGALALVSFSEPKNLKKIGQNL 200

Query: 70  -QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ-SHDMMTT 127
                          A    +++  NVN + E + + E NR      + +K    DM   
Sbjct: 201 YTYQGEGIHQVSDSNALRQYMLEKSNVNAVREMSALIEINRFLDMYSKVLKTHQDDMNAE 260

Query: 128 TLD 130
            ++
Sbjct: 261 AIN 263


>gi|229132600|ref|ZP_04261448.1| Flagellar basal-body rod protein flgG [Bacillus cereus BDRD-ST196]
 gi|228650832|gb|EEL06819.1| Flagellar basal-body rod protein flgG [Bacillus cereus BDRD-ST196]
          Length = 257

 Score = 35.2 bits (79), Expect = 3.2,   Method: Composition-based stats.
 Identities = 9/64 (14%), Positives = 26/64 (40%), Gaps = 1/64 (1%)

Query: 71  STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT-TL 129
           +       P       + +++  NV++  E AD+  + ++  A+ + +     +      
Sbjct: 194 AEGNLADLPNGTGIVKNHMLENSNVDMTKEMADLMSSQKMIQASQRIMTSFDKIYEKEAN 253

Query: 130 DLLR 133
           ++LR
Sbjct: 254 EILR 257


>gi|192292777|ref|YP_001993382.1| flagellar basal body rod protein FlgB [Rhodopseudomonas palustris
           TIE-1]
 gi|192286526|gb|ACF02907.1| flagellar basal body rod protein FlgB [Rhodopseudomonas palustris
           TIE-1]
          Length = 135

 Score = 35.2 bits (79), Expect = 3.2,   Method: Composition-based stats.
 Identities = 21/118 (17%), Positives = 39/118 (33%), Gaps = 4/118 (3%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFV 74
           +     R ++++ENI+N+ T    P      + T   +      G + + +      T  
Sbjct: 16  MQWHQERQKVLAENISNSDTPNFRPRDLVEPKFTPEGQAAGGPGGSLPLMRTSASHLTPP 75

Query: 75  EEFDPGHPVANASGIVKYP---NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
               P     N  G    P    VN+  E   +      Y A      +S  ++ T +
Sbjct: 76  G-GSPSFSTNNNGGFQTRPAGNAVNLEDEMLKVSSNQMDYAAVTSLYSRSLGLLKTAI 132


>gi|170748110|ref|YP_001754370.1| flagellar basal body rod protein FlgB [Methylobacterium
           radiotolerans JCM 2831]
 gi|170654632|gb|ACB23687.1| flagellar basal body rod protein [Methylobacterium radiotolerans
           JCM 2831]
          Length = 128

 Score = 35.2 bits (79), Expect = 3.2,   Method: Composition-based stats.
 Identities = 26/127 (20%), Positives = 44/127 (34%), Gaps = 9/127 (7%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M  +    ++A+  L   +AR  +IS NIANA T G         R    F +V+  +  
Sbjct: 1   MSPIF-LFNLASRQLQHLTARQAVISGNIANANTPG------YRARDLTPFRDVLDKTVL 53

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPN--VNVLVETADMRETNRLYMANLQTI 118
                             P    A+    V +    V++  +     E +R    N   +
Sbjct: 54  TMAATRPGHLELDEPGARPARASASGGWDVVHSGNSVSIEEQLMKSGEVSRDQALNGSVV 113

Query: 119 KQSHDMM 125
           K  + M+
Sbjct: 114 KAFNRML 120


>gi|326392863|ref|ZP_08214093.1| protein of unknown function DUF1078 domain protein
           [Thermoanaerobacter ethanolicus JW 200]
 gi|325991095|gb|EGD49857.1| protein of unknown function DUF1078 domain protein
           [Thermoanaerobacter ethanolicus JW 200]
          Length = 89

 Score = 35.2 bits (79), Expect = 3.2,   Method: Composition-based stats.
 Identities = 7/38 (18%), Positives = 20/38 (52%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             V++  E  +M +  + Y+A+ + I    +++ T ++
Sbjct: 45  SGVSLDEEMTNMLKYQKSYVASARVITVMDELLDTLIN 82


>gi|317008999|gb|ADU79579.1| flagellar basal-body rod protein [Helicobacter pylori India7]
          Length = 269

 Score = 35.2 bits (79), Expect = 3.2,   Method: Composition-based stats.
 Identities = 11/60 (18%), Positives = 21/60 (35%), Gaps = 1/60 (1%)

Query: 72  TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ-SHDMMTTTLD 130
                       A    +++  NVN + E + + E NR      + +K    DM    ++
Sbjct: 204 QGEGVHQVSDSGALKQYMLEKSNVNAVREMSALIEINRFLDMYSKVLKTHQDDMNAEAIN 263


>gi|254779049|ref|YP_003057154.1| Flagellar basal-body rod protein FlgG (Distal rod protein)
           [Helicobacter pylori B38]
 gi|254000960|emb|CAX28904.1| Flagellar basal-body rod protein FlgG (Distal rod protein)
           [Helicobacter pylori B38]
          Length = 269

 Score = 35.2 bits (79), Expect = 3.2,   Method: Composition-based stats.
 Identities = 11/60 (18%), Positives = 21/60 (35%), Gaps = 1/60 (1%)

Query: 72  TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ-SHDMMTTTLD 130
                       A    +++  NVN + E + + E NR      + +K    DM    ++
Sbjct: 204 QGEGVHQVSDSGALKQYMLEKSNVNAVREMSALIEINRFLDMYSKVLKTHQDDMNAEAIN 263


>gi|237751238|ref|ZP_04581718.1| flagellar basal-body rod protein [Helicobacter bilis ATCC 43879]
 gi|229372604|gb|EEO22995.1| flagellar basal-body rod protein [Helicobacter bilis ATCC 43879]
          Length = 132

 Score = 35.2 bits (79), Expect = 3.2,   Method: Composition-based stats.
 Identities = 24/136 (17%), Positives = 54/136 (39%), Gaps = 21/136 (15%)

Query: 13  SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQST 72
           S L  +S R  +I+ N+AN  T         YR + + FE+++              ++ 
Sbjct: 3   SALDYRSLRQDLIASNMANVDTP-------FYRPRDVHFEDMLAEKASQIFDNKSRAETL 55

Query: 73  FVEEFDPGHPVANASGIVKYP--------------NVNVLVETADMRETNRLYMANLQTI 118
            + +  P H  +  +  +                 +V++ VET++M + + +Y A    +
Sbjct: 56  KLTQALPQHLPSGLADPLTGSLFFRDGHLARNDGNSVDLDVETSEMGKNSVMYQALTSAL 115

Query: 119 KQSHDMMTTTLDLLRD 134
           K+   +    L+  ++
Sbjct: 116 KKHKGIFAYALESSKN 131


>gi|119503641|ref|ZP_01625724.1| Flagellar basal-body rod protein FlgB [marine gamma proteobacterium
           HTCC2080]
 gi|119460703|gb|EAW41795.1| Flagellar basal-body rod protein FlgB [marine gamma proteobacterium
           HTCC2080]
          Length = 133

 Score = 35.2 bits (79), Expect = 3.2,   Method: Composition-based stats.
 Identities = 24/121 (19%), Positives = 40/121 (33%), Gaps = 1/121 (0%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M     +  I+   LA++S RM ++S NIANA T         +R            +  
Sbjct: 1   MAGFDNALGISPQVLALRSQRMNLLSANIANAETPNYKARDIDFRAAMTQASNSQESTQL 60

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPN-VNVLVETADMRETNRLYMANLQTIK 119
              +   +         +        S + +  N V    E A+  E    Y A+L  + 
Sbjct: 61  RATQAKHMTGFESQLGVESDIKYRQPSSLQENGNTVETHREHAEFMENALKYQASLNLLD 120

Query: 120 Q 120
            
Sbjct: 121 S 121


>gi|120554039|ref|YP_958390.1| flagellar hook-associated protein FlgK [Marinobacter aquaeolei
          VT8]
 gi|120323888|gb|ABM18203.1| flagellar hook-associated protein FlgK [Marinobacter aquaeolei
          VT8]
          Length = 688

 Score = 35.2 bits (79), Expect = 3.2,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 21/65 (32%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +     I  SG+    A +   + NI NA T G +     +  +            GV V
Sbjct: 1  MAGLIGIGLSGVLGYQAALNTTANNITNANTPGYSRQEVQFETQEGRRTGAGTIGSGVSV 60

Query: 64 KKIGV 68
            I  
Sbjct: 61 ADIRR 65


>gi|296447447|ref|ZP_06889372.1| flagellar basal-body rod protein FlgF [Methylosinus trichosporium
           OB3b]
 gi|296255067|gb|EFH02169.1| flagellar basal-body rod protein FlgF [Methylosinus trichosporium
           OB3b]
          Length = 240

 Score = 35.2 bits (79), Expect = 3.3,   Method: Composition-based stats.
 Identities = 13/85 (15%), Positives = 24/85 (28%), Gaps = 3/85 (3%)

Query: 33  RTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKY 92
               +  G           +  +  S G     I    +T V +F            V+ 
Sbjct: 141 DGMINQAGRQIGAIGLFMIDGDVKLSRGPGASVIPDKPATAVLDFGRNGVEQGV---VET 197

Query: 93  PNVNVLVETADMRETNRLYMANLQT 117
            NVN + E   +   +R + +    
Sbjct: 198 ANVNPVREMVKLISASRAFESVSSM 222


>gi|222084862|ref|YP_002543391.1| flagellar basal-body rod protein [Agrobacterium radiobacter K84]
 gi|221722310|gb|ACM25466.1| flagellar basal-body rod protein [Agrobacterium radiobacter K84]
          Length = 130

 Score = 35.2 bits (79), Expect = 3.3,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 39/114 (34%), Gaps = 6/114 (5%)

Query: 19  SARMQIISENIANARTTG-DTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEF 77
             R ++++ NIANA T         P++    +    M  +    +      QS  +   
Sbjct: 18  QTRQEVVAGNIANANTPKFRAKDVTPFQAVLDNQNVGMAKTNPAHLSGNEFSQSGDINVE 77

Query: 78  DPGHPVANASGIVKYPN--VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
           +      N    V+     V +  E A   E  R Y  N   +   H MM  T+
Sbjct: 78  E---ASLNQEIGVQESGNTVGLEDELAKSGEIKRQYSLNTALVSSFHRMMLMTV 128


>gi|254755230|ref|ZP_05207264.1| flagellar hook-associated protein FlgK [Bacillus anthracis str.
           Vollum]
          Length = 239

 Score = 35.2 bits (79), Expect = 3.3,   Method: Composition-based stats.
 Identities = 7/40 (17%), Positives = 20/40 (50%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            VN+  E  ++    + ++AN + I   +++  +   ++R
Sbjct: 200 GVNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSLFSIIR 239


>gi|163802597|ref|ZP_02196489.1| flagellar hook-associated protein K [Vibrio sp. AND4]
 gi|159173680|gb|EDP58499.1| flagellar hook-associated protein K [Vibrio sp. AND4]
          Length = 637

 Score = 35.2 bits (79), Expect = 3.3,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 22/39 (56%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN+  E A+M +  + YMA+ + ++ ++D   T L L
Sbjct: 598 SGVNLDEEAANMMKFQQAYMASSRVMQAANDTFNTILQL 636


>gi|163781739|ref|ZP_02176739.1| flagellar basal body rod protein FlgB [Hydrogenivirga sp.
           128-5-R1-1]
 gi|159882959|gb|EDP76463.1| flagellar basal body rod protein FlgB [Hydrogenivirga sp.
           128-5-R1-1]
          Length = 124

 Score = 35.2 bits (79), Expect = 3.3,   Method: Composition-based stats.
 Identities = 21/114 (18%), Positives = 37/114 (32%), Gaps = 12/114 (10%)

Query: 20  ARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDP 79
            R ++I  NIANA     TP       +     + +      R          F      
Sbjct: 19  KRHKVILSNIANAD----TPNYRAKDLQFKDEVDRIPLKTTSRKHIKPSGGEGFKVVEVK 74

Query: 80  GHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            + V N        NV+V  E A + +    Y   ++ I  +   +    +++R
Sbjct: 75  RNLVGNDRN-----NVSVEEEMAKLTQNRIAYEVYMKMISGN---INKLNNIIR 120


>gi|294679032|ref|YP_003579647.1| flagellar basal-body rod protein FlgF [Rhodobacter capsulatus SB
           1003]
 gi|294477852|gb|ADE87240.1| flagellar basal-body rod protein FlgF [Rhodobacter capsulatus SB
           1003]
          Length = 237

 Score = 35.2 bits (79), Expect = 3.4,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 21/55 (38%)

Query: 79  PGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           P        G V+  NV+ + E A M E  R Y      + +  + +   +  L+
Sbjct: 183 PAENARVMQGAVEQSNVDPVREIARMVEVQRAYELGQTFLDREDERIRNVISTLK 237


>gi|157146220|ref|YP_001453539.1| flagellar hook-associated protein FlgK [Citrobacter koseri ATCC
          BAA-895]
 gi|157083425|gb|ABV13103.1| hypothetical protein CKO_01977 [Citrobacter koseri ATCC BAA-895]
          Length = 544

 Score = 35.2 bits (79), Expect = 3.4,   Method: Composition-based stats.
 Identities = 16/96 (16%), Positives = 36/96 (37%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          + +  + A SGL+   A +   S NI++    G T  +    +   +         GV V
Sbjct: 1  MSSLINNAMSGLSAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGGWVGNGVYV 60

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
            +  +  +F+          ++   V+Y  ++ + 
Sbjct: 61 SGVQREYDSFITNQLRAAQNQSSGLTVRYEQMSKID 96


>gi|228964756|ref|ZP_04125863.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis
           serovar sotto str. T04001]
 gi|228795006|gb|EEM42505.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis
           serovar sotto str. T04001]
          Length = 249

 Score = 35.2 bits (79), Expect = 3.4,   Method: Composition-based stats.
 Identities = 9/64 (14%), Positives = 25/64 (39%), Gaps = 1/64 (1%)

Query: 71  STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT-TL 129
           +       P       + +++  NV++  E AD+    ++  A+ + +     +      
Sbjct: 186 AEGNIANLPNGTGIVKNHMLENSNVDMTKEMADLMTDQKMIQASQRVMTSFDKIYEKEAN 245

Query: 130 DLLR 133
           ++LR
Sbjct: 246 EILR 249


>gi|153839997|ref|ZP_01992664.1| flagellar hook-associated protein [Vibrio parahaemolyticus AQ3810]
 gi|149746457|gb|EDM57466.1| flagellar hook-associated protein [Vibrio parahaemolyticus AQ3810]
          Length = 375

 Score = 35.2 bits (79), Expect = 3.4,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 22/39 (56%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN+  E A+M +  + YMA+ + ++ ++D   T L L
Sbjct: 336 AGVNLDEEAANMMKFQQAYMASSRVMQAANDTFNTILQL 374


>gi|254488055|ref|ZP_05101260.1| flagellar hook-associated protein FlgK [Roseobacter sp. GAI101]
 gi|214044924|gb|EEB85562.1| flagellar hook-associated protein FlgK [Roseobacter sp. GAI101]
          Length = 490

 Score = 35.2 bits (79), Expect = 3.4,   Method: Composition-based stats.
 Identities = 8/38 (21%), Positives = 17/38 (44%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            V+   E   +    + + AN + ++   +MM T L +
Sbjct: 453 GVDSDQELQKLLLVEQAFAANARMVQAVDEMMQTLLRI 490


>gi|229178180|ref|ZP_04305551.1| Flagellar basal-body rod protein flgG [Bacillus cereus 172560W]
 gi|228605310|gb|EEK62760.1| Flagellar basal-body rod protein flgG [Bacillus cereus 172560W]
          Length = 257

 Score = 34.8 bits (78), Expect = 3.4,   Method: Composition-based stats.
 Identities = 9/64 (14%), Positives = 25/64 (39%), Gaps = 1/64 (1%)

Query: 71  STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT-TL 129
           +       P       + +++  NV++  E AD+    ++  A+ + +     +      
Sbjct: 194 AEGNIANLPNGTGIVKNHMLENSNVDMTKEMADLMTDQKMIQASQRVMTSFDKIYEKEAN 253

Query: 130 DLLR 133
           ++LR
Sbjct: 254 EILR 257


>gi|197285513|ref|YP_002151385.1| flagellar basal body rod protein FlgB [Proteus mirabilis HI4320]
 gi|227356004|ref|ZP_03840396.1| flagellar basal-body rod protein [Proteus mirabilis ATCC 29906]
 gi|194683000|emb|CAR43449.1| flagellar basal-body rod protein [Proteus mirabilis HI4320]
 gi|227163992|gb|EEI48894.1| flagellar basal-body rod protein [Proteus mirabilis ATCC 29906]
          Length = 137

 Score = 34.8 bits (78), Expect = 3.4,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 48/133 (36%), Gaps = 4/133 (3%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTG-DTPGSDPYRRKTISFEEVMHGSGG 60
           D L  + H     L++++ R +I++ NIANA T G      D       + E    GS G
Sbjct: 3   DKLENTFHFQQEALSLRNKRQEILAANIANADTPGFQARDIDFAAELKKTMENGRTGSHG 62

Query: 61  VRVKKIGVDQSTFVEEFDPGHP---VANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           +++             +               +    V++ +E ++  + +  Y A++  
Sbjct: 63  LQLTMTSERHIPIKPGYRLEADLLYRVPHQTSMDGNTVDMDMERSNFADNSVKYQADVTF 122

Query: 118 IKQSHDMMTTTLD 130
           I      M   L 
Sbjct: 123 INSQVKSMMAVLQ 135


>gi|68164540|gb|AAY87269.1| predicted flagellar hook-associated protein 1 [uncultured
          bacterium BAC17H8]
          Length = 1404

 Score = 34.8 bits (78), Expect = 3.4,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 21/62 (33%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +     I  SGL      + I  +NIAN  T G           + +   V+  S G  +
Sbjct: 1  MANLFDIGRSGLNSYRQGLAITGQNIANINTDGYKRRGAELEELSAAKASVLESSQGSGM 60

Query: 64 KK 65
            
Sbjct: 61 GV 62


>gi|15645706|ref|NP_207883.1| flagellar basal-body rod protein (flgG) [Helicobacter pylori 26695]
 gi|2314244|gb|AAD08138.1| flagellar basal-body rod protein (flgG) [Helicobacter pylori 26695]
          Length = 269

 Score = 34.8 bits (78), Expect = 3.5,   Method: Composition-based stats.
 Identities = 11/60 (18%), Positives = 21/60 (35%), Gaps = 1/60 (1%)

Query: 72  TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ-SHDMMTTTLD 130
                       A    +++  NVN + E + + E NR      + +K    DM    ++
Sbjct: 204 QGEGVHQVSDSGALRQYMLEKSNVNAVREMSALIEINRFLDMYSKVLKTHQDDMNAEAIN 263


>gi|331005470|ref|ZP_08328849.1| hypothetical protein IMCC1989_1994 [gamma proteobacterium IMCC1989]
 gi|330420746|gb|EGG95033.1| hypothetical protein IMCC1989_1994 [gamma proteobacterium IMCC1989]
          Length = 245

 Score = 34.8 bits (78), Expect = 3.5,   Method: Composition-based stats.
 Identities = 7/55 (12%), Positives = 17/55 (30%)

Query: 76  EFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
                   +     ++  N     +  ++ +  R   A  Q I+    M+ T  +
Sbjct: 186 VQKEVELPSIRQSFLEASNSQPAEDMLNLIQLARHIEATQQVIRGYDGMLATVFE 240


>gi|301644994|ref|ZP_07244960.1| flagellar hook-associated protein FlgK [Escherichia coli MS 146-1]
 gi|301076723|gb|EFK91529.1| flagellar hook-associated protein FlgK [Escherichia coli MS 146-1]
          Length = 293

 Score = 34.8 bits (78), Expect = 3.5,   Method: Composition-based stats.
 Identities = 15/110 (13%), Positives = 35/110 (31%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           + +  + A SGL    A +   S NI++    G T  +    +   +         GV V
Sbjct: 1   MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGGWVGNGVYV 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
             +  +   F+          ++    +Y  ++ +        ++     
Sbjct: 61  SGVQREYDAFITNQLRAAQTQSSGLTARYEQMSKIDNMLSTSTSSLATQM 110


>gi|229172385|ref|ZP_04299944.1| Flagellar hook-associated protein FlgK [Bacillus cereus MM3]
 gi|228610856|gb|EEK68119.1| Flagellar hook-associated protein FlgK [Bacillus cereus MM3]
          Length = 432

 Score = 34.8 bits (78), Expect = 3.5,   Method: Composition-based stats.
 Identities = 6/40 (15%), Positives = 20/40 (50%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
            VN+  E  ++    + ++AN + +   +++  +   ++R
Sbjct: 393 GVNMEEEMVNLMAFQKYFVANSKAMTTMNEVFDSLFSIIR 432


>gi|15887904|ref|NP_353585.1| flagellar basal body rod protein FlgF [Agrobacterium tumefaciens
           str. C58]
 gi|2459708|gb|AAB71784.1| FlgF [Agrobacterium tumefaciens]
 gi|15155496|gb|AAK86370.1| flagellar basal body rod protein [Agrobacterium tumefaciens str.
           C58]
          Length = 244

 Score = 34.8 bits (78), Expect = 3.5,   Method: Composition-based stats.
 Identities = 8/50 (16%), Positives = 20/50 (40%)

Query: 80  GHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
            H V    G ++  NVN + +   + + NR + +    ++ +       +
Sbjct: 188 NHEVGVVQGYLEQSNVNGISQMTQLIQVNRAFESISSMMRDTESTFGEGI 237


>gi|260222467|emb|CBA32060.1| hypothetical protein Csp_D30230 [Curvibacter putative symbiont of
          Hydra magnipapillata]
          Length = 188

 Score = 34.8 bits (78), Expect = 3.5,   Method: Composition-based stats.
 Identities = 21/76 (27%), Positives = 29/76 (38%), Gaps = 3/76 (3%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
          S     SGL   S  + +I  NIANA T G       +          +  +GG     I
Sbjct: 2  SFQTGLSGLNSSSKNLDVIGNNIANANTVGMKASRTEFAAL---IATQLGPAGGNLTPGI 58

Query: 67 GVDQSTFVEEFDPGHP 82
          GV   T  ++F  G+ 
Sbjct: 59 GVSVGTVAQQFTQGNI 74


>gi|27380938|ref|NP_772467.1| flagellar basal body rod protein FlgF [Bradyrhizobium japonicum
           USDA 110]
 gi|27354104|dbj|BAC51092.1| flagellar basal-body rod protein [Bradyrhizobium japonicum USDA
           110]
          Length = 253

 Score = 34.8 bits (78), Expect = 3.5,   Method: Composition-based stats.
 Identities = 20/103 (19%), Positives = 31/103 (30%)

Query: 28  NIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANAS 87
           NIA   T     G+            V         K      S                
Sbjct: 144 NIAPDGTVTVLEGTAKTDSIRGKIRMVTFDDPAKLTKLGANLYSAGSANQQVDTKSTVQQ 203

Query: 88  GIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           G ++  NVN + E + M E  R Y A    ++Q  D+  + ++
Sbjct: 204 GYIEKSNVNSVGEMSRMVEVMRSYTAIANLLQQQSDLHKSAIE 246


>gi|84388097|ref|ZP_00990993.1| flagellar hook-associated protein [Vibrio splendidus 12B01]
 gi|84377164|gb|EAP94034.1| flagellar hook-associated protein [Vibrio splendidus 12B01]
          Length = 626

 Score = 34.8 bits (78), Expect = 3.5,   Method: Composition-based stats.
 Identities = 20/122 (16%), Positives = 36/122 (29%), Gaps = 1/122 (0%)

Query: 11  ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQ 70
           A S L  Q   +     NI+NA T G +  S                  GV V+ +    
Sbjct: 10  AQSVLTAQRQ-LNTTGHNISNANTEGYSRQSVIQGVNDPRQYGGQSYGMGVHVENVRRSW 68

Query: 71  STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             F  +         A+      N+++L        + ++     +       +  T  D
Sbjct: 69  DQFAVKELNLSTTNAANKGDTEANLDMLSSMLSSVASKKIPENLNEWFDSVKTLADTPND 128

Query: 131 LL 132
           + 
Sbjct: 129 VG 130


>gi|116872071|ref|YP_848852.1| flagellar basal body rod protein FlgG [Listeria welshimeri serovar
           6b str. SLCC5334]
 gi|116740949|emb|CAK20069.1| flagellar basal-body rod protein, putative [Listeria welshimeri
           serovar 6b str. SLCC5334]
          Length = 259

 Score = 34.8 bits (78), Expect = 3.6,   Method: Composition-based stats.
 Identities = 11/99 (11%), Positives = 31/99 (31%), Gaps = 1/99 (1%)

Query: 30  ANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV-DQSTFVEEFDPGHPVANASG 88
           A A        ++ Y  +  +       +  +     G    +       P       +G
Sbjct: 153 AEANGDLFNADTNQYLGRIGTKFVSADQADSLVKDGEGRLHVNGINTINLPAGQGNIQNG 212

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
           +++  NV++ +E   + +  R+  A+   +     +   
Sbjct: 213 VLETSNVDLGIEMVQLMDNQRMVQASKNVVNMFDKVYDK 251


>gi|90415321|ref|ZP_01223255.1| flagellar basal-body rod protein FlgB [marine gamma proteobacterium
           HTCC2207]
 gi|90332644|gb|EAS47814.1| flagellar basal-body rod protein FlgB [marine gamma proteobacterium
           HTCC2207]
          Length = 128

 Score = 34.8 bits (78), Expect = 3.6,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 43/120 (35%), Gaps = 6/120 (5%)

Query: 1   MDYLIAS-AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
           M  +  +   I    L +++ RM+++S+NIANA T G       ++    + ++      
Sbjct: 1   MMKMFDAAFGIHEKALDLRAKRMEVLSQNIANADTPGFKARDIDFKNVLNNVQQAGSIRT 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
                      +     +            V    V++ VE A   +    Y A L+ I+
Sbjct: 61  THAAHVSQASSAGADMVYT-----VPFGTSVDGNTVDISVEHAKYGKAAAEYQATLRFIE 115


>gi|320535378|ref|ZP_08035492.1| flagellar basal-body rod protein FlgB [Treponema phagedenis F0421]
 gi|320147780|gb|EFW39282.1| flagellar basal-body rod protein FlgB [Treponema phagedenis F0421]
          Length = 136

 Score = 34.8 bits (78), Expect = 3.6,   Method: Composition-based stats.
 Identities = 14/118 (11%), Positives = 33/118 (27%), Gaps = 6/118 (5%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M+  I +  + +  L V + R  + + N+ANA           +  +     +      G
Sbjct: 1   MNSFIKTTDLLHRALDVNALRYTVTANNLANAEVPEFKRTEVSFESELKRALDSEKNKDG 60

Query: 61  VRVKKIGVDQ------STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
              +              +            ++      NV+   E  ++ +    Y 
Sbjct: 61  FFEQATKGSNLLSDEVIDYRSVEPRRVLDYISTVKANGNNVDAEEEAMNILKIQMQYQ 118


>gi|308173580|ref|YP_003920285.1| flagellar component of cell-proximal portion of basal-body rod
           [Bacillus amyloliquefaciens DSM 7]
 gi|307606444|emb|CBI42815.1| flagellar component of cell-proximal portion of basal-body rod
           [Bacillus amyloliquefaciens DSM 7]
 gi|328911721|gb|AEB63317.1| flagellar component of cell-proximal portion of basal-body rod
           [Bacillus amyloliquefaciens LL3]
          Length = 129

 Score = 34.8 bits (78), Expect = 3.6,   Method: Composition-based stats.
 Identities = 20/119 (16%), Positives = 35/119 (29%), Gaps = 4/119 (3%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD    +     + L     + ++I+ NIAN  T         +R         +     
Sbjct: 1   MDLFSGTIQNLENALGRADIKQKVITNNIANIDTPNYKAKKVSFRNLLDQETSNLEAVKT 60

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
                   D          G      +G     NV++  E  D+ E    Y A ++ + 
Sbjct: 61  DYRHVDFTDSGADYSIVSSGDTSYQQNGN----NVDIDKEMTDLAENQINYQALVERMS 115


>gi|288573036|ref|ZP_06391393.1| flagellar basal-body rod protein FlgB [Dethiosulfovibrio
           peptidovorans DSM 11002]
 gi|288568777|gb|EFC90334.1| flagellar basal-body rod protein FlgB [Dethiosulfovibrio
           peptidovorans DSM 11002]
          Length = 131

 Score = 34.8 bits (78), Expect = 3.6,   Method: Composition-based stats.
 Identities = 20/101 (19%), Positives = 32/101 (31%), Gaps = 2/101 (1%)

Query: 21  RMQIISENIANARTTGDTP-GSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDP 79
           R + + +N+ANA T G          +                  K     +  VEE  P
Sbjct: 19  RFRSVGQNLANANTPGYARREVSFEDQLDDIVNGPKRLPMATTDPKHMTTHARSVEEVTP 78

Query: 80  GHPVANASGI-VKYPNVNVLVETADMRETNRLYMANLQTIK 119
                      +   NV+  +E A + ET   Y A  + + 
Sbjct: 79  REDRIPDQLYRLDRNNVDPEIEMAKLAETKMGYEAMTRLVS 119


>gi|269866427|ref|XP_002652270.1| flagellar hook protein flgE [Enterocytozoon bieneusi H348]
 gi|220062840|gb|EED41785.1| flagellar hook protein flgE [Enterocytozoon bieneusi H348]
          Length = 140

 Score = 34.8 bits (78), Expect = 3.6,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 18/39 (46%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          S +I  SGL   + ++ +   NIAN  TTG       + 
Sbjct: 2  SFNIGLSGLYAANKQLDVTGNNIANVATTGFKSSRAEFA 40


>gi|291519600|emb|CBK74821.1| flagellar basal-body rod protein FlgB [Butyrivibrio fibrisolvens
           16/4]
          Length = 132

 Score = 34.8 bits (78), Expect = 3.6,   Method: Composition-based stats.
 Identities = 20/116 (17%), Positives = 34/116 (29%), Gaps = 4/116 (3%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           + +   A         R  +I  N+AN  T G       +           H     R  
Sbjct: 10  VNALDCAAD---ASWRRQTLILNNLANDDTPGYKRKDIEFGSVLKKELMETHERTLDRAV 66

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
            +  D    V+ ++      N S  +   NV+   E  ++      Y A   +I  
Sbjct: 67  NVLDDNGNHVDGYEYI-DYENYSYRLDGNNVDPDTENVELASEQLRYQAYTTSISN 121


>gi|217031579|ref|ZP_03437084.1| hypothetical protein HPB128_21g137 [Helicobacter pylori B128]
 gi|298736702|ref|YP_003729232.1| flagellar basal-body rod protein FlgG [Helicobacter pylori B8]
 gi|216946779|gb|EEC25375.1| hypothetical protein HPB128_21g137 [Helicobacter pylori B128]
 gi|298355896|emb|CBI66768.1| flagellar basal-body rod protein FlgG [Helicobacter pylori B8]
          Length = 269

 Score = 34.8 bits (78), Expect = 3.6,   Method: Composition-based stats.
 Identities = 11/60 (18%), Positives = 21/60 (35%), Gaps = 1/60 (1%)

Query: 72  TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ-SHDMMTTTLD 130
                       A    +++  NVN + E + + E NR      + +K    DM    ++
Sbjct: 204 QGEGVHQVSDSGALRQYMLEKSNVNAVREMSALIEINRFLDMYSKVLKTHQDDMNAEAIN 263


>gi|167464316|ref|ZP_02329405.1| flagellar hook-associated protein FlgK [Paenibacillus larvae subsp.
           larvae BRL-230010]
          Length = 519

 Score = 34.8 bits (78), Expect = 3.6,   Method: Composition-based stats.
 Identities = 12/108 (11%), Positives = 31/108 (28%), Gaps = 2/108 (1%)

Query: 23  QIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHP 82
             +++ +A  + T  T           +  +      G    +       +  E      
Sbjct: 407 NTLAKLMAQLKDTKFTFSGAGRGITNSTINDFYGSLVGQLGVQSKEATRQYENEGKLVVQ 466

Query: 83  VANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
                  V    V  L E  +M + N  + A  + +    +++   ++
Sbjct: 467 ADTRRTSV--SGVVELEEMMEMVKYNHSFNAAARFMTTYDEILNKLIN 512


>gi|221069321|ref|ZP_03545426.1| flagellar basal-body rod protein FlgF [Comamonas testosteroni KF-1]
 gi|220714344|gb|EED69712.1| flagellar basal-body rod protein FlgF [Comamonas testosteroni KF-1]
          Length = 246

 Score = 34.8 bits (78), Expect = 3.6,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 18/43 (41%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           ++  NVN +     M   +R +   ++ ++ +     +   LL
Sbjct: 200 IEGSNVNSVETMVGMIAASRQFEQQMKLLQTAETNDKSASQLL 242


>gi|268680077|ref|YP_003304508.1| hypothetical protein Sdel_1455 [Sulfurospirillum deleyianum DSM
           6946]
 gi|268618108|gb|ACZ12473.1| protein of unknown function DUF1078 domain protein
           [Sulfurospirillum deleyianum DSM 6946]
          Length = 93

 Score = 34.8 bits (78), Expect = 3.6,   Method: Composition-based stats.
 Identities = 17/125 (13%), Positives = 33/125 (26%), Gaps = 33/125 (26%)

Query: 8   AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
             I  + +   S+ M   + N+AN  T            +  +       +         
Sbjct: 1   MQINANAMMAMSSWMGNSAHNVANVNTEEFKATQTTITNQNDAVVAQSAQTQNS------ 54

Query: 68  VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
                                       ++  E  D     R + AN + I+   +M+ T
Sbjct: 55  ---------------------------TDLETEFTDQISLERAFEANTKPIQAQDEMLGT 87

Query: 128 TLDLL 132
            LD+ 
Sbjct: 88  LLDMK 92


>gi|229058421|ref|ZP_04196805.1| Flagellar basal-body rod protein flgG [Bacillus cereus AH603]
 gi|228719930|gb|EEL71520.1| Flagellar basal-body rod protein flgG [Bacillus cereus AH603]
          Length = 257

 Score = 34.8 bits (78), Expect = 3.6,   Method: Composition-based stats.
 Identities = 9/64 (14%), Positives = 26/64 (40%), Gaps = 1/64 (1%)

Query: 71  STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT-TL 129
           +       P       + +++  NV++  E AD+  + ++  A+ + +     +      
Sbjct: 194 AEGNLADLPNGTGIVKNHMLENSNVDMTKEMADLMSSQKMIQASQRIMTSFDKIYEKEAN 253

Query: 130 DLLR 133
           ++LR
Sbjct: 254 EILR 257


>gi|254504490|ref|ZP_05116641.1| Flagella basal body rod protein [Labrenzia alexandrii DFL-11]
 gi|222440561|gb|EEE47240.1| Flagella basal body rod protein [Labrenzia alexandrii DFL-11]
          Length = 246

 Score = 34.8 bits (78), Expect = 3.6,   Method: Composition-based stats.
 Identities = 9/52 (17%), Positives = 21/52 (40%)

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
                  G ++  NV  + +   + E  R Y +  + +K  +D+    + +L
Sbjct: 190 QRFNVVQGALERSNVEGVYQVTQLIEVTRAYESITKMLKDVNDLRQQAIQVL 241


>gi|333004892|gb|EGK24412.1| flagellar hook-associated protein 1 domain protein [Shigella
           flexneri VA-6]
          Length = 274

 Score = 34.8 bits (78), Expect = 3.7,   Method: Composition-based stats.
 Identities = 16/110 (14%), Positives = 36/110 (32%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           + +  + A SGL    A +   S NI++    G T  +    +   +         GV V
Sbjct: 1   MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGGWVGNGVYV 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
             +  +  TF+          ++    +Y  ++ +        ++     
Sbjct: 61  SGVQREYDTFITNQLRAVQTQSSGLTARYEQMSKIDNMLSTSTSSLATQM 110


>gi|308184156|ref|YP_003928289.1| flagellar basal-body rod protein [Helicobacter pylori SJM180]
 gi|308060076|gb|ADO01972.1| flagellar basal-body rod protein [Helicobacter pylori SJM180]
          Length = 269

 Score = 34.8 bits (78), Expect = 3.7,   Method: Composition-based stats.
 Identities = 11/60 (18%), Positives = 21/60 (35%), Gaps = 1/60 (1%)

Query: 72  TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ-SHDMMTTTLD 130
                       A    +++  NVN + E + + E NR      + +K    DM    ++
Sbjct: 204 QGESVHQVSDSGALKQYMLEKSNVNAVREMSALIEINRFLDMYSKVLKTHQDDMNAEAIN 263


>gi|160896078|ref|YP_001561660.1| flagellar basal-body rod protein FlgF [Delftia acidovorans SPH-1]
 gi|160361662|gb|ABX33275.1| flagellar basal-body rod protein FlgF [Delftia acidovorans SPH-1]
          Length = 246

 Score = 34.8 bits (78), Expect = 3.7,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 17/43 (39%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           ++  NVN +     M    R +   ++ ++ +     T   LL
Sbjct: 200 IEGSNVNSVETMVGMIAAARQFETQMRLLQTAETNDKTASQLL 242


>gi|89902478|ref|YP_524949.1| flagellar basal-body rod FlgF [Rhodoferax ferrireducens T118]
 gi|89347215|gb|ABD71418.1| Flagellar basal-body rod FlgF [Rhodoferax ferrireducens T118]
          Length = 246

 Score = 34.8 bits (78), Expect = 3.7,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 19/43 (44%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           ++  NVN +     M +T R +   ++ ++ +     +   LL
Sbjct: 200 LEGSNVNAIEAMVGMIQTARQFETQMRLLQTAESNDRSAAQLL 242


>gi|115523557|ref|YP_780468.1| flagellar basal body rod protein FlgF [Rhodopseudomonas palustris
           BisA53]
 gi|115517504|gb|ABJ05488.1| flagellar basal body rod protein [Rhodopseudomonas palustris
           BisA53]
          Length = 254

 Score = 34.8 bits (78), Expect = 3.7,   Method: Composition-based stats.
 Identities = 20/104 (19%), Positives = 33/104 (31%), Gaps = 1/104 (0%)

Query: 28  NIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVAN-A 86
           NIA         G+            V   +    VK+     S            A   
Sbjct: 144 NIAADGNVSVLEGTATVDSLRGKLRLVNFANAQQLVKEGSNLYSAAGGAAAQQDTKAQVR 203

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            G ++  NVN ++E   M +  R Y      ++Q  ++  T L+
Sbjct: 204 QGFIEKSNVNSVMEMTRMIDVTRAYTQLSAMLQQQGELRRTALE 247


>gi|302669846|ref|YP_003829806.1| flagellar hook-associated protein FlgK1 [Butyrivibrio
          proteoclasticus B316]
 gi|302394319|gb|ADL33224.1| flagellar hook-associated protein FlgK1 [Butyrivibrio
          proteoclasticus B316]
          Length = 557

 Score = 34.8 bits (78), Expect = 3.7,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 20/52 (38%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEE 53
            L+A+ ++  SGL      +   + N+AN  T G T        +     E
Sbjct: 1  MSLMANLYVGQSGLQTSQNALNTTAHNMANVDTEGYTRQQVSQGTRAYQTLE 52


>gi|228958023|ref|ZP_04119759.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar
           pakistani str. T13001]
 gi|228801648|gb|EEM48529.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar
           pakistani str. T13001]
          Length = 166

 Score = 34.8 bits (78), Expect = 3.7,   Method: Composition-based stats.
 Identities = 17/121 (14%), Positives = 37/121 (30%), Gaps = 7/121 (5%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFV 74
           +     +   +S NIANA T G       +  +      +   +         + Q+  +
Sbjct: 43  MNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQMNKSSALYKNNAADLKSNPDLYQTNEM 102

Query: 75  EEFDPGHPVA-------NASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
                            +        +V+V  E  D+ + N+LY  ++  I   + +   
Sbjct: 103 HLPTVNTKNTYAKIQTKSMQTNKDGNSVDVTTEMLDLMKANQLYGISINAINTQYAINQA 162

Query: 128 T 128
            
Sbjct: 163 A 163


>gi|30248323|ref|NP_840393.1| flagellar basal body rod protein FlgF [Nitrosomonas europaea ATCC
           19718]
 gi|30138209|emb|CAD84217.1| Flagella basal body rod protein [Nitrosomonas europaea ATCC 19718]
          Length = 247

 Score = 34.8 bits (78), Expect = 3.7,   Method: Composition-based stats.
 Identities = 9/49 (18%), Positives = 21/49 (42%)

Query: 84  ANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           A   G ++  NVNV+ E   M    R +   ++ ++ +        +++
Sbjct: 195 ALIDGALESSNVNVISEMVKMITLARQFDMQMKMLENAQQNAQQAGEIM 243


>gi|254516995|ref|ZP_05129053.1| flagellar hook-associated protein FlgK [gamma proteobacterium
          NOR5-3]
 gi|219674500|gb|EED30868.1| flagellar hook-associated protein FlgK [gamma proteobacterium
          NOR5-3]
          Length = 639

 Score = 34.8 bits (78), Expect = 3.7,   Method: Composition-based stats.
 Identities = 12/63 (19%), Positives = 18/63 (28%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +    +I  S L      +     NIAN  T G +     +               GV +
Sbjct: 1  MADVLNIGTSALLSLQRAISTTGHNIANVNTEGFSRQRVEFAALEPQLSGAGFVGSGVTI 60

Query: 64 KKI 66
            I
Sbjct: 61 AAI 63


>gi|207092742|ref|ZP_03240529.1| flagellar hook protein FlgE [Helicobacter pylori HPKX_438_AG0C1]
          Length = 646

 Score = 34.8 bits (78), Expect = 3.8,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 16/33 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          ++ S     +G+      + I S NIAN  TTG
Sbjct: 1  MLRSLWSGVNGMQAHQIALDIESNNIANVNTTG 33


>gi|260431757|ref|ZP_05785728.1| flagellar hook-associated protein FlgK [Silicibacter
           lacuscaerulensis ITI-1157]
 gi|260415585|gb|EEX08844.1| flagellar hook-associated protein FlgK [Silicibacter
           lacuscaerulensis ITI-1157]
          Length = 483

 Score = 34.8 bits (78), Expect = 3.8,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 18/57 (31%)

Query: 75  EEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
                         +V    V+   E   M +  + Y AN + I    ++M   L L
Sbjct: 427 RMTFAASLHQQMEQLVAEQGVDSDAELQRMMQIEQAYAANARIISVVDELMEMLLRL 483


>gi|188592114|ref|YP_001796712.1| flagellar basal body rod protein flgb [Cupriavidus taiwanensis LMG
           19424]
 gi|170938488|emb|CAP63475.1| FlgB: Flagellar basal-body rod protein [Cupriavidus taiwanensis LMG
           19424]
          Length = 135

 Score = 34.8 bits (78), Expect = 3.8,   Method: Composition-based stats.
 Identities = 22/133 (16%), Positives = 42/133 (31%), Gaps = 3/133 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           +D L A+       L++++ R  +I+ NIA+A T G       +        E  H + G
Sbjct: 2   IDRLDAALRFQQEALSLRNQRQSVIASNIAHADTPGYKARDFDFSSTLAQTVERGHRNEG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVA---NASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           + +    V              +A        V    V +  E     +    + + L  
Sbjct: 62  MSLSTTSVRHLPAQAPGREEFDLAYRIPLQSSVDGNTVEMDTERVAFADNAVHFESGLTV 121

Query: 118 IKQSHDMMTTTLD 130
           +      M   + 
Sbjct: 122 MNSKIKTMLAAIQ 134


>gi|163785675|ref|ZP_02180209.1| hypothetical protein HG1285_10435 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159879056|gb|EDP73026.1| hypothetical protein HG1285_10435 [Hydrogenivirga sp. 128-5-R1-1]
          Length = 125

 Score = 34.8 bits (78), Expect = 3.8,   Method: Composition-based stats.
 Identities = 21/120 (17%), Positives = 42/120 (35%), Gaps = 9/120 (7%)

Query: 1   MDYLIASAH-IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
           M +L      I+ +  +    R +II  NIANA T    P    + +      ++     
Sbjct: 1   MSFLWNDLDKISETA-SYFLERTKIIQSNIANADTPNYKPKDLVFEKVLNENIQLKKDDP 59

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
                   ++   ++ E             V++       E A + E++ +Y   L+ +K
Sbjct: 60  RHLSPDTKLEIKKYIVEDSYYSGYDKNKVDVEH-------ELAKLSESSIMYKTLLEVMK 112


>gi|159045918|ref|YP_001534712.1| flagellar hook-associated protein FlgK [Dinoroseobacter shibae DFL
           12]
 gi|157913678|gb|ABV95111.1| flagellar hook-associated protein FlgK [Dinoroseobacter shibae DFL
           12]
          Length = 485

 Score = 34.8 bits (78), Expect = 3.8,   Method: Composition-based stats.
 Identities = 8/38 (21%), Positives = 15/38 (39%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            V+   E   +      Y AN + I+   +M+   L +
Sbjct: 448 GVDTDAELQKLLMIETAYAANARVIQTVDEMLDLLLRI 485



 Score = 34.1 bits (76), Expect = 7.1,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 26/65 (40%), Gaps = 7/65 (10%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            + ++   A SGL   S    ++S NIANA T G       Y  + +    V     G 
Sbjct: 1  MSVTSTLGNALSGLTAASKAASVVSSNIANATTEG-------YGVRQVQTTSVSLNGQGS 53

Query: 62 RVKKI 66
           V+ +
Sbjct: 54 GVQVV 58


>gi|317010632|gb|ADU84379.1| flagellar basal-body rod protein [Helicobacter pylori SouthAfrica7]
          Length = 269

 Score = 34.8 bits (78), Expect = 3.8,   Method: Composition-based stats.
 Identities = 11/60 (18%), Positives = 21/60 (35%), Gaps = 1/60 (1%)

Query: 72  TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ-SHDMMTTTLD 130
                       A    +++  NVN + E + + E NR      + +K    DM    ++
Sbjct: 204 QGEGIHQVSDSGALRQYMLEKSNVNAVREMSTLIEINRFLDMYSKVLKTHQDDMNAEAIN 263


>gi|27381995|ref|NP_773524.1| flagellar basal body rod protein FlgF [Bradyrhizobium japonicum
          USDA 110]
 gi|27355165|dbj|BAC52149.1| flagellar basal body rod protein [Bradyrhizobium japonicum USDA
          110]
          Length = 242

 Score = 34.8 bits (78), Expect = 3.8,   Method: Composition-based stats.
 Identities = 12/91 (13%), Positives = 25/91 (27%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          + ++ ++  S       R+Q I+ N+AN  T         +                   
Sbjct: 1  MQSALYVGLSAQVALEKRLQTIANNVANVNTAAFRTDVVKFETVLSKAGANPVAFSSPGD 60

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIVKYPN 94
            I  +     E  +P        G + +  
Sbjct: 61 NIISRETGNITESGNPLDVAVVGQGWLAFAG 91


>gi|220932528|ref|YP_002509436.1| flagellar basal-body rod protein FlgB [Halothermothrix orenii H
           168]
 gi|219993838|gb|ACL70441.1| flagellar basal-body rod protein FlgB [Halothermothrix orenii H
           168]
          Length = 131

 Score = 34.8 bits (78), Expect = 3.9,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 48/135 (35%), Gaps = 13/135 (9%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEV-----M 55
           MD+ +    +   GL   S R + +++NIAN  T         +     S         +
Sbjct: 1   MDFTLDFLKL---GLDGASKRHRALADNIANVDTPNYKRKDVDFVSTLKSIASQNAKLKL 57

Query: 56  HGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANL 115
             +    +   G     F E         N        NV++ VE A++ + N  Y   +
Sbjct: 58  ETTDDGHISGTGSVLKPFKEYRITNTSYRNDGN-----NVDIEVEMAELAKNNLYYNTLV 112

Query: 116 QTIKQSHDMMTTTLD 130
           Q I Q   ++  T+D
Sbjct: 113 QQISQKFKILNETID 127


>gi|254255092|ref|ZP_04948409.1| Flagellar hook-associated protein [Burkholderia dolosa AUO158]
 gi|124899737|gb|EAY71580.1| Flagellar hook-associated protein [Burkholderia dolosa AUO158]
          Length = 446

 Score = 34.8 bits (78), Expect = 3.9,   Method: Composition-based stats.
 Identities = 14/84 (16%), Positives = 30/84 (35%), Gaps = 2/84 (2%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHP--VANASGIVKYPNVNVLVETADMR 105
               E  +  +  + V K+G                   + +  +    VN+  E  ++ 
Sbjct: 360 PGFGEVALGDAYTMLVGKVGSQSQQNQTMLAMAADVRKQSEAAWLATSGVNMDEEAVNIA 419

Query: 106 ETNRLYMANLQTIKQSHDMMTTTL 129
           E  + Y AN++ I  ++ +   TL
Sbjct: 420 EFMQTYSANMKVISVANQLFDVTL 443


>gi|254455211|ref|ZP_05068645.1| flagellar basal body FlaE domain protein [Octadecabacter
           antarcticus 238]
 gi|198263495|gb|EDY87768.1| flagellar basal body FlaE domain protein [Octadecabacter
           antarcticus 238]
          Length = 267

 Score = 34.8 bits (78), Expect = 3.9,   Method: Composition-based stats.
 Identities = 9/81 (11%), Positives = 25/81 (30%)

Query: 48  TISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRET 107
           T +    +   G    +      +            +   G ++  NVN+  E   +   
Sbjct: 185 TFANASSLQQLGLGSFQASQASGAPSFGIAGSEGFGSVQVGKLEASNVNLTTELTSLIRA 244

Query: 108 NRLYMANLQTIKQSHDMMTTT 128
            + +  + + ++   DM+   
Sbjct: 245 QQQFSGSSRILQAYSDMIEKL 265


>gi|95928660|ref|ZP_01311407.1| Flagellar hook-associated protein [Desulfuromonas acetoxidans DSM
          684]
 gi|95135450|gb|EAT17102.1| Flagellar hook-associated protein [Desulfuromonas acetoxidans DSM
          684]
          Length = 465

 Score = 34.8 bits (78), Expect = 3.9,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 28/77 (36%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M  LI + +   +GL V    +++   N+ NA T G +                +    G
Sbjct: 1  MAGLIGALNTGKTGLMVSQKGIEVTGNNLTNASTEGYSRQVLKVSSSPALEHNGIIVGHG 60

Query: 61 VRVKKIGVDQSTFVEEF 77
            V  I   +S FV + 
Sbjct: 61 AVVTAIARQESVFVTKQ 77


>gi|32266906|ref|NP_860938.1| flagellar basal body rod protein FlgB [Helicobacter hepaticus ATCC
           51449]
 gi|32262958|gb|AAP78004.1| flagellar basal body rod protein FlgB [Helicobacter hepaticus ATCC
           51449]
          Length = 144

 Score = 34.8 bits (78), Expect = 3.9,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 52/133 (39%), Gaps = 17/133 (12%)

Query: 14  GLAVQSARMQIISENIANARTTGDTPGSDPYRR------------KTISFEEVMHGSGGV 61
            L  +S R  +I+ N+AN  T    P    + +               S++  +  +   
Sbjct: 16  ALDYRSIRQDMIASNLANVDTPFYRPKDVNFEQYLSRENKKIFGTAPRSYKLELAKTSSK 75

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
            +    +D+ T    +  GH   N        +V++ VET++M + + +Y A    +K+ 
Sbjct: 76  HLDTRRIDKDTATMFWRDGHLAKNDGN-----SVDLDVETSEMGKNSTMYQALTSALKRH 130

Query: 122 HDMMTTTLDLLRD 134
             +    +D  R+
Sbjct: 131 KGIFAYAMDSGRN 143


>gi|308449061|ref|XP_003087842.1| hypothetical protein CRE_07183 [Caenorhabditis remanei]
 gi|308252509|gb|EFO96461.1| hypothetical protein CRE_07183 [Caenorhabditis remanei]
          Length = 716

 Score = 34.8 bits (78), Expect = 4.0,   Method: Composition-based stats.
 Identities = 11/130 (8%), Positives = 38/130 (29%), Gaps = 8/130 (6%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           + +A +A   ++ +  R    + N ANA     +           + +++   +    + 
Sbjct: 172 MNAAALAAYKMSAEDVR---SAINSANANQPKGSFDGPYRTTMLDANDQIRSIADYENLI 228

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
               + +             +    +     +      ++    R    N   I+ +  +
Sbjct: 229 LRWNNGAPIRLRDVAKVIEGSEDRYMAAWAGSQAAILVNV---QR--QPNANVIQVADQI 283

Query: 125 MTTTLDLLRD 134
                +L ++
Sbjct: 284 KQILPELEKN 293


>gi|118588701|ref|ZP_01546109.1| flagellar basal-body rod protein B [Stappia aggregata IAM 12614]
 gi|118438687|gb|EAV45320.1| flagellar basal-body rod protein B [Stappia aggregata IAM 12614]
          Length = 134

 Score = 34.8 bits (78), Expect = 4.0,   Method: Composition-based stats.
 Identities = 20/129 (15%), Positives = 37/129 (28%), Gaps = 5/129 (3%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGD-TPGSDPYRRKTISFEEVMHGSGGV 61
            L  +     S +     R  ++++NIANA T G        Y  K     + ++ S   
Sbjct: 7   PLFQALK---SKMQWHQTRQSVLAQNIANADTPGYMARDVKEYSFKDHIGRQSLNLSTDT 63

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
                        ++                  VN+  +   + E    Y A      + 
Sbjct: 64  TASGHIRGSLGATDKAKIEEDDTFEVTPSGNS-VNLEEQMMHITENQMDYQAATTLYTKG 122

Query: 122 HDMMTTTLD 130
             ++ T L 
Sbjct: 123 LGLIRTALS 131


>gi|32266589|ref|NP_860621.1| flagellar distal rod protein FlgG [Helicobacter hepaticus ATCC
           51449]
 gi|32262640|gb|AAP77687.1| flagellar distal rod protein FlgG [Helicobacter hepaticus ATCC
           51449]
          Length = 277

 Score = 34.8 bits (78), Expect = 4.0,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 20/45 (44%), Gaps = 1/45 (2%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS-HDMMTTTLD 130
            G ++  NVN + E   + ETNRL     + +K    ++    + 
Sbjct: 227 QGFLEKSNVNAVQEMTSLIETNRLVDMYSKVMKSHMDELNAEAIT 271


>gi|75762829|ref|ZP_00742649.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis
           serovar israelensis ATCC 35646]
 gi|228900355|ref|ZP_04064584.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis IBL
           4222]
 gi|74489683|gb|EAO53079.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis
           serovar israelensis ATCC 35646]
 gi|228859242|gb|EEN03673.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis IBL
           4222]
          Length = 259

 Score = 34.8 bits (78), Expect = 4.0,   Method: Composition-based stats.
 Identities = 9/64 (14%), Positives = 25/64 (39%), Gaps = 1/64 (1%)

Query: 71  STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT-TL 129
           +       P       + +++  NV++  E AD+    ++  A+ + +     +      
Sbjct: 196 AEGNIANLPNGTGIVKNHMLENSNVDMTKEMADLMTDQKMIQASQRVMTSFDKIYEKEAN 255

Query: 130 DLLR 133
           ++LR
Sbjct: 256 EILR 259


>gi|85858814|ref|YP_461016.1| flagellar basal-body rod protein [Syntrophus aciditrophicus SB]
 gi|85721905|gb|ABC76848.1| flagellar basal-body rod protein [Syntrophus aciditrophicus SB]
          Length = 128

 Score = 34.8 bits (78), Expect = 4.0,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 47/120 (39%), Gaps = 9/120 (7%)

Query: 1   MDYLIA-SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
           MD+L + +  I +  L  +S R +II  NIAN  +         Y+ K   F+  +  + 
Sbjct: 1   MDFLFSKTIGILSGMLGFRSQRNKIILSNIANMDSPD-------YKPKDYVFKRDLSRAV 53

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP-NVNVLVETADMRETNRLYMANLQTI 118
             R +   +         D      +   +V+   NVN+  E   + E +  Y   ++ +
Sbjct: 54  ADRGQLTLLKTDGKHLPADLNEISDDDFEVVETGKNVNMDTEMTHLAENHLRYNLTVEML 113


>gi|16799765|ref|NP_470033.1| flagellar basal body rod protein FlgG [Listeria innocua Clip11262]
 gi|16413142|emb|CAC95922.1| lin0690 [Listeria innocua Clip11262]
 gi|313620081|gb|EFR91589.1| flagellar basal body rod protein FlgG [Listeria innocua FSL S4-378]
          Length = 259

 Score = 34.8 bits (78), Expect = 4.0,   Method: Composition-based stats.
 Identities = 13/98 (13%), Positives = 31/98 (31%), Gaps = 1/98 (1%)

Query: 30  ANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGI 89
           AN     +   +    R    F         V+  +  +  +       P       +G+
Sbjct: 155 ANGDLY-NAETNQYLGRLGTKFVSADQVDSLVKDGEGRLHVNGINTMNLPAGQGNIQNGV 213

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
           ++  NV++ VE   + +  R+  A+   +     +   
Sbjct: 214 LETSNVDLGVEMVQLMDNQRMVQASKNVVNMFDKVYDK 251


>gi|92114092|ref|YP_574020.1| flagellar hook-associated protein [Chromohalobacter salexigens
          DSM 3043]
 gi|91797182|gb|ABE59321.1| Flagellar hook-associated protein [Chromohalobacter salexigens
          DSM 3043]
          Length = 539

 Score = 34.8 bits (78), Expect = 4.1,   Method: Composition-based stats.
 Identities = 16/83 (19%), Positives = 27/83 (32%), Gaps = 7/83 (8%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          ++   I  SGL+   + +   S N++N  T G       Y R+     E           
Sbjct: 1  MSIFSIGLSGLSAAQSALSTTSNNLSNVYTEG-------YNRQLTILGESYSNGSTGTGV 53

Query: 65 KIGVDQSTFVEEFDPGHPVANAS 87
           +   Q  F       +  AN+ 
Sbjct: 54 SVDEVQRQFNSYVTEQYNDANSQ 76



 Score = 33.7 bits (75), Expect = 8.8,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 18/39 (46%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN+  E A++    + Y AN + I     ++ + L L
Sbjct: 500 SGVNLDEEYANLVRYQQYYQANARVIDVGSQVLDSVLQL 538


>gi|311068139|ref|YP_003973062.1| flagellar basal body rod protein FlgB [Bacillus atrophaeus 1942]
 gi|310868656|gb|ADP32131.1| flagellar basal body rod protein FlgB [Bacillus atrophaeus 1942]
          Length = 129

 Score = 34.8 bits (78), Expect = 4.1,   Method: Composition-based stats.
 Identities = 24/121 (19%), Positives = 45/121 (37%), Gaps = 8/121 (6%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD    +     + L   + + ++I+ NIAN  T       +   +K      +   S  
Sbjct: 1   MDLFSGTIQNLENALGRANVKQKVITNNIANIDT------PNYKAKKVSFQNLLNQESSR 54

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVK--YPNVNVLVETADMRETNRLYMANLQTI 118
           +   K       F +    G  VAN++   +    NV++  E  D+ E    Y A ++ +
Sbjct: 55  LESVKTDYRHVDFSDTGSNGSIVANSNTAYQQNGNNVDIDKEMTDLAENQINYQALVERM 114

Query: 119 K 119
            
Sbjct: 115 S 115


>gi|254474364|ref|ZP_05087750.1| flagellar basal-body rod protein FlgF [Ruegeria sp. R11]
 gi|214028607|gb|EEB69442.1| flagellar basal-body rod protein FlgF [Ruegeria sp. R11]
          Length = 239

 Score = 34.8 bits (78), Expect = 4.1,   Method: Composition-based stats.
 Identities = 10/37 (27%), Positives = 15/37 (40%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
            G ++  NVN + E A M E  R Y      ++    
Sbjct: 190 QGFLEGSNVNAISEVARMVEIQRAYEMGQSFLETEDQ 226


>gi|229058377|ref|ZP_04196761.1| Flagellar basal-body rod protein [Bacillus cereus AH603]
 gi|228719886|gb|EEL71476.1| Flagellar basal-body rod protein [Bacillus cereus AH603]
          Length = 161

 Score = 34.8 bits (78), Expect = 4.1,   Method: Composition-based stats.
 Identities = 19/121 (15%), Positives = 38/121 (31%), Gaps = 7/121 (5%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFV 74
           +     +   +S NIANA T G       +  K      +   +         + Q+  +
Sbjct: 38  MNYLVTKRNTVSSNIANANTPGYKAQDVTFAEKMNMSSALYKKNAADLKSNPDLYQTNVM 97

Query: 75  EEFDPGHPVA-------NASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
                            +        +V+V  E  D+ +TN+LY  ++  I   + +   
Sbjct: 98  HLPTANTKNTYAKIQTKSMQTNKDGNSVDVTTEMLDLMKTNQLYGVSINAINTQYAINQA 157

Query: 128 T 128
            
Sbjct: 158 A 158


>gi|317179250|dbj|BAJ57038.1| flagellar basal-body rod protein [Helicobacter pylori F30]
          Length = 269

 Score = 34.8 bits (78), Expect = 4.2,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 17/39 (43%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSD 42
          +    + A   +A Q  R+ +IS N+AN  T G      
Sbjct: 1  MQNGYYAATGAMAAQFNRLDLISNNLANLNTNGFKRDDA 39


>gi|307823537|ref|ZP_07653766.1| flagellar hook-associated protein FlgK [Methylobacter
          tundripaludum SV96]
 gi|307735522|gb|EFO06370.1| flagellar hook-associated protein FlgK [Methylobacter
          tundripaludum SV96]
          Length = 612

 Score = 34.8 bits (78), Expect = 4.2,   Method: Composition-based stats.
 Identities = 17/81 (20%), Positives = 26/81 (32%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +      + SGL V    ++    NI+N  T G +        K   F    +   GV V
Sbjct: 1  MSGLLATSLSGLLVAQRSLETTQNNISNIHTEGYSRQRVEQGTKPAQFTGDGYVGQGVNV 60

Query: 64 KKIGVDQSTFVEEFDPGHPVA 84
            I      F+ +       A
Sbjct: 61 TNITRSYDQFINKQLSSSLSA 81


>gi|219670132|ref|YP_002460567.1| flagellar basal-body rod protein FlgB [Desulfitobacterium hafniense
           DCB-2]
 gi|219540392|gb|ACL22131.1| flagellar basal-body rod protein FlgB [Desulfitobacterium hafniense
           DCB-2]
          Length = 133

 Score = 34.8 bits (78), Expect = 4.2,   Method: Composition-based stats.
 Identities = 23/134 (17%), Positives = 48/134 (35%), Gaps = 7/134 (5%)

Query: 1   MDYLIAS--AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
           M   + +   +I    L   S R ++++ N+AN  T         +    +   E M  +
Sbjct: 1   MSDWLNTPVINILEKSLDASSLRYKVLANNVANVDTPDFKRSDVDFD---LLLGEAMGQT 57

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVK--YPNVNVLVETADMRETNRLYMANLQ 116
           GG    K+  ++      F+    V +     +    NV++  E  ++ E    Y +  +
Sbjct: 58  GGELPLKVTSERHLQKTGFNSSGVVQDQGTTYRNDGNNVDIDKEMVNVAENGIYYNSVTR 117

Query: 117 TIKQSHDMMTTTLD 130
            I      + T + 
Sbjct: 118 AISAQLSHLRTVIT 131


>gi|311694367|gb|ADP97240.1| flagellar hook-associated protein FlgK [marine bacterium HP15]
          Length = 676

 Score = 34.8 bits (78), Expect = 4.2,   Method: Composition-based stats.
 Identities = 13/70 (18%), Positives = 22/70 (31%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +     I  +G+    A +     NI NA T G +     +  +            GV V
Sbjct: 1  MAGLIGIGLTGILSHQAALNTTGNNITNANTPGYSRQEVLFETQEGQRTGAGTIGSGVNV 60

Query: 64 KKIGVDQSTF 73
            I    + +
Sbjct: 61 ADIRRLANEY 70


>gi|138894737|ref|YP_001125190.1| flagellar basal body rod protein FlgB [Geobacillus
           thermodenitrificans NG80-2]
 gi|134266250|gb|ABO66445.1| Flagellar basal-body rod protein [Geobacillus thermodenitrificans
           NG80-2]
          Length = 129

 Score = 34.8 bits (78), Expect = 4.2,   Method: Composition-based stats.
 Identities = 26/122 (21%), Positives = 45/122 (36%), Gaps = 10/122 (8%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M    ++ H    GL   S R Q I++NIAN  T G        + K I F+  +  +  
Sbjct: 1   MSLFSSTIHWIEQGLRYASLRQQAIADNIANVDTPGC-------KAKDIRFQAELDRALQ 53

Query: 61  VRVKKIGVDQSTFVEEFD--PGHPVANASGIVKYPN-VNVLVETADMRETNRLYMANLQT 117
           +  K+   +   F  E +                 N V++  E + + E    Y A ++ 
Sbjct: 54  LEAKRTNPNHFPFRSEQNGKIIVTANANISYNHNSNSVDIDQEMSKLAENQIYYNALIEQ 113

Query: 118 IK 119
           + 
Sbjct: 114 LN 115


>gi|116250476|ref|YP_766314.1| flagellar basal body rod protein FlgF [Rhizobium leguminosarum bv.
           viciae 3841]
 gi|115255124|emb|CAK06198.1| putative flagella associated protein [Rhizobium leguminosarum bv.
           viciae 3841]
          Length = 244

 Score = 34.8 bits (78), Expect = 4.2,   Method: Composition-based stats.
 Identities = 19/106 (17%), Positives = 33/106 (31%), Gaps = 3/106 (2%)

Query: 28  NIANARTTGDTPGSDPYRRKTISF---EEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVA 84
           N         T G      + I      E     G +R +  G+  +           V 
Sbjct: 133 NTTGGEPAVGTDGIIYQGGRQIGSLGLFEADVSKGYLRYENSGIMTTEQPRAVVDRFNVG 192

Query: 85  NASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
              G ++  NVN + E   + E NR + +    ++ S D     + 
Sbjct: 193 VEQGYLENSNVNAMREITQLIEVNRAFESVSSLMRDSEDSFKEAVQ 238


>gi|239834448|ref|ZP_04682776.1| flagellar basal body rod protein FlgF [Ochrobactrum intermedium LMG
           3301]
 gi|239822511|gb|EEQ94080.1| flagellar basal body rod protein FlgF [Ochrobactrum intermedium LMG
           3301]
          Length = 243

 Score = 34.8 bits (78), Expect = 4.3,   Method: Composition-based stats.
 Identities = 15/113 (13%), Positives = 34/113 (30%), Gaps = 3/113 (2%)

Query: 25  ISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDP---GH 81
           I  N A       + G+       I    +        +   G       +   P    +
Sbjct: 128 IVLNPAGGAPKISSDGAIYQNGAQIGAIGLFTIPADAELTYAGTSGVIPNKPAQPVADDN 187

Query: 82  PVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
            V    G+++  NV+ + E   +   +R +      + Q    ++  + +L  
Sbjct: 188 SVGVVQGMIEGSNVDAMTEMTRLISVSRAFEQVNNLLAQQETTVSEAIKILGS 240


>gi|86747891|ref|YP_484387.1| flagellar hook protein FlgE [Rhodopseudomonas palustris HaA2]
 gi|86570919|gb|ABD05476.1| conserved hypothetical protein [Rhodopseudomonas palustris HaA2]
          Length = 421

 Score = 34.8 bits (78), Expect = 4.3,   Method: Composition-based stats.
 Identities = 13/96 (13%), Positives = 27/96 (28%)

Query: 34  TTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYP 93
           + G+T         T +    +    G          S  ++E             ++  
Sbjct: 323 SNGETIAIYKIPVATFTASAELEAQSGGLYATTAASGSATLQESGANGAGTIYGSELESS 382

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
             +   + + M    + Y A  Q I   + M  T +
Sbjct: 383 TTDTNEQFSSMISAQQAYSAASQVITAVNKMFDTLI 418



 Score = 34.1 bits (76), Expect = 5.9,   Method: Composition-based stats.
 Identities = 15/43 (34%), Positives = 22/43 (51%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY 44
            L  +   A S L  QS+ + +IS+NIAN+ T G    S  +
Sbjct: 1  MSLSGALSSAISALNAQSSALAMISDNIANSSTVGYKTSSASF 43


>gi|85715053|ref|ZP_01046038.1| Flagellar basal body rod protein [Nitrobacter sp. Nb-311A]
 gi|85698250|gb|EAQ36122.1| Flagellar basal body rod protein [Nitrobacter sp. Nb-311A]
          Length = 255

 Score = 34.8 bits (78), Expect = 4.3,   Method: Composition-based stats.
 Identities = 11/53 (20%), Positives = 23/53 (43%)

Query: 78  DPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            P        G ++  NV+ + E + M + +R Y      ++Q  D+  T ++
Sbjct: 196 QPDTKSQIHQGFIERSNVSAVTEMSRMVQVSRAYTQMATLLQQQSDLQRTAIE 248


>gi|261856354|ref|YP_003263637.1| flagellar hook-associated protein FlgK [Halothiobacillus
          neapolitanus c2]
 gi|261836823|gb|ACX96590.1| flagellar hook-associated protein FlgK [Halothiobacillus
          neapolitanus c2]
          Length = 549

 Score = 34.8 bits (78), Expect = 4.3,   Method: Composition-based stats.
 Identities = 13/74 (17%), Positives = 24/74 (32%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +      + +GL      +     NIANA T G +            ++   +   GV+V
Sbjct: 1  MPDLMSNSVTGLLAMQQALATTGNNIANANTPGYSRERVNLASMQAQYQNGSYIGSGVQV 60

Query: 64 KKIGVDQSTFVEEF 77
            +      F+   
Sbjct: 61 ASVTRVYDQFITSQ 74


>gi|325291945|ref|YP_004277809.1| flagellar basal body rod protein FlgF [Agrobacterium sp. H13-3]
 gi|325059798|gb|ADY63489.1| flagellar basal body rod protein FlgF [Agrobacterium sp. H13-3]
          Length = 244

 Score = 34.8 bits (78), Expect = 4.4,   Method: Composition-based stats.
 Identities = 10/63 (15%), Positives = 22/63 (34%)

Query: 67  GVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
           GV            H V    G ++  NVN + +   + + NR + +    ++ +     
Sbjct: 175 GVKPVAPPTPVVNNHEVGVVQGYLEQSNVNGISQMTQLIQVNRAFESISSLMRDTESTFG 234

Query: 127 TTL 129
             +
Sbjct: 235 DAI 237


>gi|149912833|ref|ZP_01901367.1| flagellar basal-body rod protein FlgF, putative [Roseobacter sp.
           AzwK-3b]
 gi|149813239|gb|EDM73065.1| flagellar basal-body rod protein FlgF, putative [Roseobacter sp.
           AzwK-3b]
          Length = 237

 Score = 34.8 bits (78), Expect = 4.4,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 19/57 (33%), Gaps = 8/57 (14%)

Query: 77  FDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA--------NLQTIKQSHDMM 125
             P        G ++  NV+ + + A M E  R Y          N +  +    M+
Sbjct: 180 TKPVEGSRILQGFLEGSNVDPIAQVARMVEVQRAYEMGQSFLENENTRIRETLKTMI 236


>gi|146278770|ref|YP_001168929.1| flagellar hook-associated protein FlgK [Rhodobacter sphaeroides
          ATCC 17025]
 gi|145557011|gb|ABP71624.1| flagellar hook-associated protein FlgK [Rhodobacter sphaeroides
          ATCC 17025]
          Length = 476

 Score = 34.8 bits (78), Expect = 4.4,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 7/67 (10%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            +  +   A SGL V S  ++  + NIANA T G       + R+ +      +G  G 
Sbjct: 1  MSITTALSSALSGLTVTSRGVETAANNIANALTEG-------FARRELEVSARAYGGEGR 53

Query: 62 RVKKIGV 68
           V+ +GV
Sbjct: 54 GVRVVGV 60


>gi|258512706|ref|YP_003186140.1| fagellar hook-basal body protein [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
 gi|257479432|gb|ACV59751.1| fagellar hook-basal body protein [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
          Length = 262

 Score = 34.8 bits (78), Expect = 4.4,   Method: Composition-based stats.
 Identities = 15/106 (14%), Positives = 30/106 (28%), Gaps = 4/106 (3%)

Query: 30  ANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVE----EFDPGHPVAN 85
           A+A +    P       +  + +  +   G      I      +         P    + 
Sbjct: 152 ADAPSMTVAPDGTVQFGRGRTAKLALVEIGEPSSHLIPEGNGLYRLASGGVAVPARNSSV 211

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             G V   NV+     A +      Y  N Q I  ++ ++     +
Sbjct: 212 IQGAVNASNVDETAAMAQLVAAQDFYEENAQAISMANQLLGLADTI 257


>gi|86139478|ref|ZP_01058047.1| flagellar basal-body rod protein; FlgB [Roseobacter sp. MED193]
 gi|85823981|gb|EAQ44187.1| flagellar basal-body rod protein; FlgB [Roseobacter sp. MED193]
          Length = 137

 Score = 34.8 bits (78), Expect = 4.4,   Method: Composition-based stats.
 Identities = 30/126 (23%), Positives = 44/126 (34%), Gaps = 5/126 (3%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           +    IA S  +    R  ++SENIANA     TPG      K            G  V 
Sbjct: 14  LNVFKIAYSMASHAGKRQALVSENIANAD----TPGYHAKDIKPFKEVYAAGPRPGDMVA 69

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPN-VNVLVETADMRETNRLYMANLQTIKQSHD 123
             G   +             +A G     N V++  E  +  E  R +   L   K S +
Sbjct: 70  SRGSHLNGINGSNMDWAVTTSAVGTDPNDNSVSIETEILNGVEVKRQHSRALAIYKSSMN 129

Query: 124 MMTTTL 129
           ++ T+L
Sbjct: 130 ILRTSL 135


>gi|299131784|ref|ZP_07024979.1| flagellar basal-body rod protein FlgF [Afipia sp. 1NLS2]
 gi|298591921|gb|EFI52121.1| flagellar basal-body rod protein FlgF [Afipia sp. 1NLS2]
          Length = 256

 Score = 34.8 bits (78), Expect = 4.5,   Method: Composition-based stats.
 Identities = 11/60 (18%), Positives = 20/60 (33%)

Query: 71  STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
           +                G ++  NVN + E + M E  R Y      ++Q  D+    + 
Sbjct: 190 APANVTGQADTVSTVKEGFIERSNVNAIAEMSRMLEITRTYQNISNLMQQQADLRKNAIQ 249


>gi|241766921|ref|ZP_04764727.1| flagellar basal-body rod protein FlgF [Acidovorax delafieldii 2AN]
 gi|241362625|gb|EER58473.1| flagellar basal-body rod protein FlgF [Acidovorax delafieldii 2AN]
          Length = 246

 Score = 34.8 bits (78), Expect = 4.5,   Method: Composition-based stats.
 Identities = 8/48 (16%), Positives = 19/48 (39%)

Query: 85  NASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
             +G ++  NVN +     M    R +   ++ ++ +     +   LL
Sbjct: 195 MLAGAIEGSNVNAVESMVGMIAAARQFEQQMKLLQTAETNDKSASQLL 242


>gi|114777414|ref|ZP_01452411.1| Flagellar basal-body rod protein FlgB [Mariprofundus ferrooxydans
           PV-1]
 gi|114552196|gb|EAU54698.1| Flagellar basal-body rod protein FlgB [Mariprofundus ferrooxydans
           PV-1]
          Length = 133

 Score = 34.8 bits (78), Expect = 4.5,   Method: Composition-based stats.
 Identities = 19/119 (15%), Positives = 38/119 (31%), Gaps = 1/119 (0%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD L +      S L  +     +++ NIANA T         +       +        
Sbjct: 1   MDMLGSGFQKLESALIAREKVQGVLASNIANADTPNFHADKRSFSDFLSELQTGKSIGAA 60

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
                + +  +              ++ +    NV++  + A M E   +Y   ++ IK
Sbjct: 61  TTTNPMHISDTNEPGLSGSILGQQPSASM-DGNNVDMQQQMASMSENQLMYELTMRLIK 118


>gi|90418400|ref|ZP_01226312.1| flagellar basal-body rod protein FlgF [Aurantimonas manganoxydans
          SI85-9A1]
 gi|90338072|gb|EAS51723.1| flagellar basal-body rod protein FlgF [Aurantimonas manganoxydans
          SI85-9A1]
          Length = 241

 Score = 34.8 bits (78), Expect = 4.5,   Method: Composition-based stats.
 Identities = 13/86 (15%), Positives = 24/86 (27%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +  +  +A S     S R+  I+ N+AN+RTTG       +                   
Sbjct: 1  METALPVALSAQLAMSKRLDTIAHNVANSRTTGFRAEEIKFEELISLSAPEPVSFASEGT 60

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGI 89
                     +  +P     +    
Sbjct: 61 TYFSTRSGEMTQTGNPLDMAVDGDAF 86


>gi|329849688|ref|ZP_08264534.1| flagellar basal-body rod protein FlgB [Asticcacaulis biprosthecum
           C19]
 gi|328841599|gb|EGF91169.1| flagellar basal-body rod protein FlgB [Asticcacaulis biprosthecum
           C19]
          Length = 137

 Score = 34.5 bits (77), Expect = 4.5,   Method: Composition-based stats.
 Identities = 26/129 (20%), Positives = 48/129 (37%), Gaps = 5/129 (3%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTP-GSDPYRRKTISFEEVMHGSGGV 61
            L+ +     S +   S R ++++EN+ANA T G  P    P   + +   E   G+ G+
Sbjct: 7   PLMGALK---SRMGWHSDRQKVVAENVANASTPGFKPHDLSPQDFEKMVRGETPQGNLGL 63

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRL-YMANLQTIKQ 120
            +                   ++  S      N  VL E       +R+ + A +   ++
Sbjct: 64  TMTNTQHMAPATPFSPGAKVVLSPDSETTMDGNAVVLEEQMLRMAESRMQFQAAVGFYEK 123

Query: 121 SHDMMTTTL 129
           S  MM   +
Sbjct: 124 SMAMMRMAV 132


>gi|326795141|ref|YP_004312961.1| KilA, /APSES-type HTH DNA-binding domain [Marinomonas mediterranea
           MMB-1]
 gi|326545905|gb|ADZ91125.1| KilA, /APSES-type HTH DNA-binding domain [Marinomonas mediterranea
           MMB-1]
          Length = 188

 Score = 34.5 bits (77), Expect = 4.5,   Method: Composition-based stats.
 Identities = 13/91 (14%), Positives = 30/91 (32%)

Query: 44  YRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETAD 103
           +  K I   +    S   ++            +F   + +A +    +   V   +E  +
Sbjct: 90  FHLKVIRAFDSAQSSLPKQLPIEHASIPDESLKFQLINNIAQSMRFQQDTVVVPAIELVN 149

Query: 104 MRETNRLYMANLQTIKQSHDMMTTTLDLLRD 134
           M +  R+Y   +  +K    +  T   L + 
Sbjct: 150 MIQAVRMYQMQIAQLKTPDWVNETIETLKQS 180


>gi|323498414|ref|ZP_08103410.1| flagellar hook-associated protein FlgK [Vibrio sinaloensis DSM
           21326]
 gi|323316487|gb|EGA69502.1| flagellar hook-associated protein FlgK [Vibrio sinaloensis DSM
           21326]
          Length = 624

 Score = 34.5 bits (77), Expect = 4.5,   Method: Composition-based stats.
 Identities = 19/122 (15%), Positives = 35/122 (28%), Gaps = 1/122 (0%)

Query: 11  ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQ 70
           + S L  Q   +     NI+NA T G +  S                  GV V+K+    
Sbjct: 10  SQSVLTAQRQ-LNTTGHNISNANTEGYSRQSVIQGTNMPRQFGGETYGMGVHVEKVRRSW 68

Query: 71  STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             F            A  +    N+ +L        + ++     +       +  +  D
Sbjct: 69  DQFAVNELNMSTTNYAHKLDDEANLEMLSNMLSSVSSKKIPENLNEWFDAVKSLADSPND 128

Query: 131 LL 132
           + 
Sbjct: 129 VG 130


>gi|240145383|ref|ZP_04743984.1| flagellar hook-associated protein FlgK [Roseburia intestinalis
           L1-82]
 gi|257202504|gb|EEV00789.1| flagellar hook-associated protein FlgK [Roseburia intestinalis
           L1-82]
          Length = 587

 Score = 34.5 bits (77), Expect = 4.5,   Method: Composition-based stats.
 Identities = 20/107 (18%), Positives = 32/107 (29%), Gaps = 5/107 (4%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE----EVMH 56
           M     S  I  +GL      + + S N+AN  TTG    S  +  +          + +
Sbjct: 1   MANGFGSMFIGVAGLQSSQNALNVTSNNLANLDTTGYVRQSVLFADRDYVTFNTTAAISN 60

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETAD 103
              G+ V    V  S  V         ++            L E  +
Sbjct: 61  QQSGLGVTIGDVVHSRDVFLDRLYRTESSRQSF-YASTSEALTEVQN 106


>gi|213418634|ref|ZP_03351700.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp.
           enterica serovar Typhi str. E01-6750]
          Length = 142

 Score = 34.5 bits (77), Expect = 4.5,   Method: Composition-based stats.
 Identities = 17/99 (17%), Positives = 34/99 (34%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           + +  + A SGL    A +  +S NI N    G T  +    +   +         GV V
Sbjct: 1   MSSLINHAMSGLNAAQAALNTVSNNINNYNVAGYTRQTTILAQANSTLGAGGWIGNGVYV 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETA 102
             +  +   F+     G    ++    +Y  ++ +    
Sbjct: 61  SGVQREYDAFITNQLRGAQNQSSGLTTRYEQMSKIDNLL 99


>gi|154336369|ref|XP_001564420.1| hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904]
 gi|134061455|emb|CAM38482.1| conserved hypothetical protein [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 406

 Score = 34.5 bits (77), Expect = 4.5,   Method: Composition-based stats.
 Identities = 17/136 (12%), Positives = 39/136 (28%), Gaps = 11/136 (8%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISEN---IANARTTGDTPGSDPYRRKTISFEEVMHG 57
           M  L+ +      G+  Q  R+  ++ N   + +A                +  ++    
Sbjct: 264 MSGLLNALD----GVGAQEGRLVFMTTNHVDLLDAALIRPGRADVKIEVGLLDVDQSQRM 319

Query: 58  SGGVRVKKIGVDQSTFVEEFDPGHPVANASG----IVKYPNVNVLVETADMRETNRLYMA 113
                 K        F   F P    A          +   V   V       ++R + A
Sbjct: 320 YRKFFPKATEDMVEAFGRNFPPHVISAAQLQSHLFFHRDDAVAATVALPTFIASSRAFDA 379

Query: 114 NLQTIKQSHDMMTTTL 129
           +++ ++     +  +L
Sbjct: 380 SIEQMRSKKTRLQRSL 395


>gi|238788312|ref|ZP_04632106.1| Flagellar basal-body rod protein flgB [Yersinia frederiksenii ATCC
           33641]
 gi|238723558|gb|EEQ15204.1| Flagellar basal-body rod protein flgB [Yersinia frederiksenii ATCC
           33641]
          Length = 137

 Score = 34.5 bits (77), Expect = 4.5,   Method: Composition-based stats.
 Identities = 25/132 (18%), Positives = 44/132 (33%), Gaps = 5/132 (3%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-G 60
           D L  +       L +++ R +I+S NIANA T G       +  +     E    +G G
Sbjct: 3   DKLDGALRFQQEALNLRAQRQEILSSNIANADTPGFQARDIDFSSQLKKVMEQGRVNGTG 62

Query: 61  VRVKKIGVDQSTFVEEFDPG---HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           V +               P             +    V++  E  +  + +  Y  +L  
Sbjct: 63  VSLSLTSARHIPASTVQPPDLDLLFRVPDQPSLDGNTVDMDRERTNFADNSLKYQTDLTV 122

Query: 118 I-KQSHDMMTTT 128
           +  Q   MM+  
Sbjct: 123 LGGQIKGMMSVL 134


>gi|291539398|emb|CBL12509.1| flagellar hook-associated protein FlgK [Roseburia intestinalis
           XB6B4]
          Length = 587

 Score = 34.5 bits (77), Expect = 4.5,   Method: Composition-based stats.
 Identities = 20/107 (18%), Positives = 32/107 (29%), Gaps = 5/107 (4%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE----EVMH 56
           M     S  I  +GL      + + S N+AN  TTG    S  +  +          + +
Sbjct: 1   MANGFGSMFIGVAGLQSSQNALNVTSNNLANLDTTGYVRQSVLFADRDYVTFNTTAAISN 60

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETAD 103
              G+ V    V  S  V         ++            L E  +
Sbjct: 61  QQSGLGVTIGDVVHSRDVFLDRLYRTESSRQSF-YASTSEALTEVQN 106


>gi|229017031|ref|ZP_04173951.1| Flagellar basal-body rod protein [Bacillus cereus AH1273]
 gi|229023212|ref|ZP_04179723.1| Flagellar basal-body rod protein [Bacillus cereus AH1272]
 gi|228738137|gb|EEL88622.1| Flagellar basal-body rod protein [Bacillus cereus AH1272]
 gi|228744302|gb|EEL94384.1| Flagellar basal-body rod protein [Bacillus cereus AH1273]
          Length = 177

 Score = 34.5 bits (77), Expect = 4.5,   Method: Composition-based stats.
 Identities = 19/121 (15%), Positives = 39/121 (32%), Gaps = 7/121 (5%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV--RVKKIGVDQST 72
           +     +   +S NIANA T G       +  +      +   +         +      
Sbjct: 54  MNYLVTKRNTVSSNIANANTPGYKAQGVTFAEQMNMNNPLFKKNAADLKSNSDLYQTNEM 113

Query: 73  FVEEFDPGHPVANASGIVKYPN-----VNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
            +   +  +  A     +   N     V+V  E  D+ +TN+LY  ++  I   + +   
Sbjct: 114 HLPTANMKNTYAKIQTKLMQTNKDGNSVDVTTEMLDLMKTNQLYGISINAINTQYAINQA 173

Query: 128 T 128
            
Sbjct: 174 A 174


>gi|224373051|ref|YP_002607423.1| flagellar hook FlgE [Nautilia profundicola AmH]
 gi|223588691|gb|ACM92427.1| flagellar hook FlgE [Nautilia profundicola AmH]
          Length = 91

 Score = 34.5 bits (77), Expect = 4.5,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 18/46 (39%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           S  +     N+  E  D     + + A +  IK   +M  T LD+ 
Sbjct: 45  SANISDAGTNLTKELTDQIVIEKGFKAQVPAIKTQDEMTKTLLDIK 90


>gi|148254600|ref|YP_001239185.1| flagellar hook protein FlgE [Bradyrhizobium sp. BTAi1]
 gi|146406773|gb|ABQ35279.1| putative flagellar hook protein FlgE [Bradyrhizobium sp. BTAi1]
          Length = 412

 Score = 34.5 bits (77), Expect = 4.5,   Method: Composition-based stats.
 Identities = 8/44 (18%), Positives = 18/44 (40%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++    +   + ++M    + Y A  Q I   + M  T +  +R
Sbjct: 369 LESSTTDTTGQFSNMISAQQAYSAASQVISAVNKMYDTLISSMR 412


>gi|146341767|ref|YP_001206815.1| flagellar hook protein FlgE [Bradyrhizobium sp. ORS278]
 gi|146194573|emb|CAL78598.1| putative flagellar hook protein FlgE [Bradyrhizobium sp. ORS278]
          Length = 415

 Score = 34.5 bits (77), Expect = 4.6,   Method: Composition-based stats.
 Identities = 18/59 (30%), Positives = 27/59 (45%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
            L  +   A S L  QS+ + +IS+NI+NA TTG    S  + +   +       S G
Sbjct: 1  MSLSGALSSAISALNAQSSSLAMISDNISNADTTGYKTTSGLFEQLVTASSSSKAYSSG 59



 Score = 33.7 bits (75), Expect = 7.9,   Method: Composition-based stats.
 Identities = 7/44 (15%), Positives = 18/44 (40%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           ++    +   + ++M    + Y A  Q +   + M  T +  +R
Sbjct: 372 LESSTTDTTGQFSNMISAQQAYSAASQVVSAVNKMYDTLISSMR 415


>gi|319764545|ref|YP_004128482.1| flagellar hook-associated protein flgk [Alicycliphilus
          denitrificans BC]
 gi|317119106|gb|ADV01595.1| flagellar hook-associated protein FlgK [Alicycliphilus
          denitrificans BC]
          Length = 660

 Score = 34.5 bits (77), Expect = 4.6,   Method: Composition-based stats.
 Identities = 17/95 (17%), Positives = 31/95 (32%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          ++  ++    L      +Q    NIAN  T G +  S   +     F    +   GV V 
Sbjct: 1  MSLLNVGARALLANQVALQTTGHNIANVSTAGYSRQSVAMQTVQGQFTGSGYIGNGVNVA 60

Query: 65 KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
           I  + +  +           A   V+   ++ L 
Sbjct: 61 TILRNHNELLTRQAAAAQAVQAGDSVRAERLSQLQ 95


>gi|253573515|ref|ZP_04850858.1| flagellar basal-body rod protein FlgB [Paenibacillus sp. oral taxon
           786 str. D14]
 gi|251847043|gb|EES75048.1| flagellar basal-body rod protein FlgB [Paenibacillus sp. oral taxon
           786 str. D14]
          Length = 135

 Score = 34.5 bits (77), Expect = 4.6,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 39/120 (32%), Gaps = 2/120 (1%)

Query: 13  SGLAVQSARMQIISENIANARTTGDTPGSD-PYRRKTISFEEVMHGSGGVRVKKIGVDQS 71
           + +   + R  +I+ NIAN  T      S              M    G R         
Sbjct: 14  TAIQAANLRQGVIANNIANVDTPYFKRSSVSFESMLQAEMNGNMPALQGRRTDVRHFVIG 73

Query: 72  TFVEEFDPGHPVANASGIVKYP-NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
              E  +P   V  ++ +     NV++  E   + E    Y A ++ +     M  T ++
Sbjct: 74  PTTEVPEPVVSVDQSTAMNNNQNNVDIDSEMTKLAENQLRYNAYIEQLNYLIKMKRTVVE 133


>gi|268680165|ref|YP_003304596.1| fagellar hook-basal body protein [Sulfurospirillum deleyianum DSM
           6946]
 gi|268618196|gb|ACZ12561.1| fagellar hook-basal body protein [Sulfurospirillum deleyianum DSM
           6946]
          Length = 267

 Score = 34.5 bits (77), Expect = 4.6,   Method: Composition-based stats.
 Identities = 10/35 (28%), Positives = 17/35 (48%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
            G ++  N+N + E   + ETNRL     + +K  
Sbjct: 216 QGFLETSNINPVSEMVGLIETNRLVEMYQKVMKSH 250


>gi|209963558|ref|YP_002296473.1| flagellar hook-associated protein 1 FlgK, putative [Rhodospirillum
           centenum SW]
 gi|209957024|gb|ACI97660.1| flagellar hook-associated protein 1 FlgK, putative [Rhodospirillum
           centenum SW]
          Length = 495

 Score = 34.5 bits (77), Expect = 4.6,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 43/115 (37%), Gaps = 5/115 (4%)

Query: 7   SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
           +   A +GL  Q  +  I+S N+ANA T G T         T++   V     GV V+ +
Sbjct: 6   ALQTALTGLQAQQQKSAILSRNVANATTPGYTRKEV-----TLASLTVGGEGRGVTVQDV 60

Query: 67  GVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
             +    +           A+   +   + V  E+    +  R   + +  ++ +
Sbjct: 61  RRNADAHLARETRTQSSDYAAKAARADALAVYTESIGQPQEERSLSSAVTALETA 115


>gi|119715016|ref|YP_921981.1| flagellar hook-associated protein FlgK [Nocardioides sp. JS614]
 gi|119535677|gb|ABL80294.1| flagellar hook-associated protein FlgK [Nocardioides sp. JS614]
          Length = 466

 Score = 34.5 bits (77), Expect = 4.6,   Method: Composition-based stats.
 Identities = 11/36 (30%), Positives = 17/36 (47%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTG 36
          M    +S + A + L  Q   + + S N+AN  T G
Sbjct: 1  MAGSFSSINTALTALRYQQVALDVASTNVANVGTDG 36


>gi|254702556|ref|ZP_05164384.1| flagellar basal body rod protein FlgF [Brucella suis bv. 3 str.
          686]
 gi|261753134|ref|ZP_05996843.1| flagellar basal body rod protein FlgF [Brucella suis bv. 3 str.
          686]
 gi|261742887|gb|EEY30813.1| flagellar basal body rod protein FlgF [Brucella suis bv. 3 str.
          686]
          Length = 243

 Score = 34.5 bits (77), Expect = 4.6,   Method: Composition-based stats.
 Identities = 14/88 (15%), Positives = 25/88 (28%)

Query: 6  ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
           S ++  S L     RM  I+ N+ANA T G       +                     
Sbjct: 4  NSIYVGLSSLITLERRMDAIAHNVANASTVGFRGEGTKFDTIVSDKASDDVSFATAGKSY 63

Query: 66 IGVDQSTFVEEFDPGHPVANASGIVKYP 93
          I  +    ++  +P          + + 
Sbjct: 64 IRTEAGPLIKTDNPLDVAVKGDAWMSFS 91


>gi|300311349|ref|YP_003775441.1| Flagellar basal-body rod protein FlgB [Herbaspirillum seropedicae
           SmR1]
 gi|300074134|gb|ADJ63533.1| Flagellar basal-body rod FlgB protein [Herbaspirillum seropedicae
           SmR1]
          Length = 142

 Score = 34.5 bits (77), Expect = 4.7,   Method: Composition-based stats.
 Identities = 20/124 (16%), Positives = 39/124 (31%), Gaps = 10/124 (8%)

Query: 14  GLAVQSARMQIISENIANARTTGDTPGSDPYR---------RKTISFEEVMHGSGGVRVK 64
            + +++ R Q+++ NIANA T         +          + T      +  +    V 
Sbjct: 15  AMNLRAQRQQVLASNIANADTPNYKARDVNFADALKNALDNKATAMPPLELARTAATHVP 74

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK-QSHD 123
               +         P        G V    V++ VE  +  +    Y A +  +  Q   
Sbjct: 75  GTAPENGPGSIGGSPLLYRTVTQGSVDGNTVDLDVERNEFVDNGLRYEAGVTAVNGQIKA 134

Query: 124 MMTT 127
           M+  
Sbjct: 135 MLNA 138


>gi|295096219|emb|CBK85309.1| flagellar hook-associated protein FlgK [Enterobacter cloacae subsp.
           cloacae NCTC 9394]
          Length = 546

 Score = 34.5 bits (77), Expect = 4.7,   Method: Composition-based stats.
 Identities = 19/113 (16%), Positives = 41/113 (36%), Gaps = 2/113 (1%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           + +  + A SGL+   + +  +S NI++    G T  +        +         GV V
Sbjct: 1   MSSLINSAMSGLSAAQSALNTVSNNISSYNVAGYTRQTTILGASNSTLTGGGWVGNGVYV 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
             +  +   F+          ++    +Y  ++ + +     +T     ANLQ
Sbjct: 61  SGVQREYDAFITNQLRAAQNQSSGLTTRYQQMSKIDDVLS--DTTNSLSANLQ 111


>gi|291558217|emb|CBL35334.1| fagellar hook-basal body proteins [Eubacterium siraeum V10Sc8a]
          Length = 235

 Score = 34.5 bits (77), Expect = 4.7,   Method: Composition-based stats.
 Identities = 9/38 (23%), Positives = 16/38 (42%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
           +  NV+   E   + ET RL+ A+   +K    +    
Sbjct: 191 EKSNVDANKEITSLMETQRLFEASSAVLKYMDTINGRA 228


>gi|289523318|ref|ZP_06440172.1| flagellar hook-associated protein FlgK [Anaerobaculum
           hydrogeniformans ATCC BAA-1850]
 gi|289503010|gb|EFD24174.1| flagellar hook-associated protein FlgK [Anaerobaculum
           hydrogeniformans ATCC BAA-1850]
          Length = 825

 Score = 34.5 bits (77), Expect = 4.7,   Method: Composition-based stats.
 Identities = 8/37 (21%), Positives = 18/37 (48%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            VN+  E  D+ +  + + A  + I    +M+ T ++
Sbjct: 782 GVNIDEEMMDIVKFQQAFNAMARYITTIDEMLDTIIN 818


>gi|288940410|ref|YP_003442650.1| flagellar basal-body rod protein FlgF [Allochromatium vinosum DSM
           180]
 gi|288895782|gb|ADC61618.1| flagellar basal-body rod protein FlgF [Allochromatium vinosum DSM
           180]
          Length = 246

 Score = 34.5 bits (77), Expect = 4.7,   Method: Composition-based stats.
 Identities = 8/37 (21%), Positives = 20/37 (54%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
           SG+++  NVN +     M E +R +  +++ ++ +  
Sbjct: 198 SGMLETSNVNTVASLTRMIELSRAFETHIKMMETASS 234


>gi|291534844|emb|CBL07956.1| flagellar hook-associated protein FlgK [Roseburia intestinalis
           M50/1]
          Length = 589

 Score = 34.5 bits (77), Expect = 4.7,   Method: Composition-based stats.
 Identities = 20/107 (18%), Positives = 32/107 (29%), Gaps = 5/107 (4%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFE----EVMH 56
           M     S  I  +GL      + + S N+AN  TTG    S  +  +          + +
Sbjct: 1   MANGFGSMFIGVAGLQSSQNALNVTSNNLANLDTTGYVRQSVLFADRDYVTFNTTAAISN 60

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETAD 103
              G+ V    V  S  V         ++            L E  +
Sbjct: 61  QQSGLGVTIGDVVHSRDVFLDRLYRTESSRQSF-YASTSEALTEVQN 106


>gi|227815506|ref|YP_002815515.1| putative flagellar hook-associated protein [Bacillus anthracis
          str. CDC 684]
 gi|254755229|ref|ZP_05207263.1| flagellar hook-associated protein FlgK [Bacillus anthracis str.
          Vollum]
 gi|227007620|gb|ACP17363.1| putative flagellar hook-associated protein [Bacillus anthracis
          str. CDC 684]
          Length = 214

 Score = 34.5 bits (77), Expect = 4.7,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 30/91 (32%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
          +   SGL      +Q   +N++N  T G       Y     S         G  V+ +GV
Sbjct: 7  NTPLSGLLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGSAGASQGYSPEQKIGYGVQTLGV 66

Query: 69 DQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
          D+ T   +    +   +      Y N  +  
Sbjct: 67 DRITDEVKTKQFNDQLSQLSYYNYMNSTLSR 97


>gi|11386808|sp|P57423|FLGF_BUCAI RecName: Full=Flagellar basal-body rod protein flgF
 gi|25403600|pir||F84969 flagellar basal-body rod protein flgF [imported] - Buchnera sp.
           (strain APS)
 gi|10039012|dbj|BAB13046.1| flagellar basal-body rod protein flgF [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
          Length = 244

 Score = 34.5 bits (77), Expect = 4.8,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 16/46 (34%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            SG+++  NVN      +M    R +   ++ I            L
Sbjct: 194 QSGMLEESNVNASKNMIEMISNARQFEMQMKMISMCDQNAEYANQL 239


>gi|226944498|ref|YP_002799571.1| flagellar hook-associated protein [Azotobacter vinelandii DJ]
 gi|226719425|gb|ACO78596.1| flagellar hook-associated protein [Azotobacter vinelandii DJ]
          Length = 541

 Score = 34.5 bits (77), Expect = 4.8,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 13/38 (34%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSD 42
          ++   I  SGL      +   S NI N  T G      
Sbjct: 1  MSIFSIGVSGLNAAQVALSTTSNNITNVYTDGYNRQVT 38


>gi|260568536|ref|ZP_05839005.1| flagellar basal body rod protein [Brucella suis bv. 4 str. 40]
 gi|260155201|gb|EEW90282.1| flagellar basal body rod protein [Brucella suis bv. 4 str. 40]
          Length = 202

 Score = 34.5 bits (77), Expect = 4.8,   Method: Composition-based stats.
 Identities = 14/88 (15%), Positives = 25/88 (28%)

Query: 6  ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
           S ++  S L     RM  I+ N+ANA T G       +                     
Sbjct: 4  NSIYVGLSSLITLERRMDAIAHNVANASTVGFRGEGTKFDTIVSDKASDDVSFATAGKSY 63

Query: 66 IGVDQSTFVEEFDPGHPVANASGIVKYP 93
          I  +    ++  +P          + + 
Sbjct: 64 IRTEAGPLIKTDNPLDVAVKGDAWMSFS 91


>gi|221640803|ref|YP_002527065.1| flagellar hook-associated protein FlgK [Rhodobacter sphaeroides
           KD131]
 gi|332559781|ref|ZP_08414103.1| FlgK2 [Rhodobacter sphaeroides WS8N]
 gi|221161584|gb|ACM02564.1| Flagellar hook-associated protein FlgK [Rhodobacter sphaeroides
           KD131]
 gi|332277493|gb|EGJ22808.1| FlgK2 [Rhodobacter sphaeroides WS8N]
          Length = 481

 Score = 34.5 bits (77), Expect = 4.8,   Method: Composition-based stats.
 Identities = 8/38 (21%), Positives = 16/38 (42%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            V+   E   +    R Y AN + +    D++   L++
Sbjct: 444 GVDTDREMEQLLLLERAYAANAKVVTACDDLLQYLLEM 481


>gi|163850060|ref|YP_001638103.1| flagellar basal body rod protein FlgB [Methylobacterium extorquens
           PA1]
 gi|218528663|ref|YP_002419479.1| flagellar basal body rod protein FlgB [Methylobacterium
           chloromethanicum CM4]
 gi|240137194|ref|YP_002961663.1| Flagellar basal-body rod protein flgB [Methylobacterium extorquens
           AM1]
 gi|254559206|ref|YP_003066301.1| flagellar basal-body rod protein flgB [Methylobacterium extorquens
           DM4]
 gi|163661665|gb|ABY29032.1| flagellar basal body rod protein [Methylobacterium extorquens PA1]
 gi|218520966|gb|ACK81551.1| flagellar basal body rod protein [Methylobacterium chloromethanicum
           CM4]
 gi|240007160|gb|ACS38386.1| Flagellar basal-body rod protein flgB [Methylobacterium extorquens
           AM1]
 gi|254266484|emb|CAX22248.1| Flagellar basal-body rod protein flgB [Methylobacterium extorquens
           DM4]
          Length = 129

 Score = 34.5 bits (77), Expect = 4.8,   Method: Composition-based stats.
 Identities = 18/113 (15%), Positives = 36/113 (31%), Gaps = 10/113 (8%)

Query: 20  ARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDP 79
            R   I+ N+ANA T G       Y+ + +     +    G+ +               P
Sbjct: 20  TRQATIAGNVANANTPG-------YKARDVMPFAQVLARTGLDMASTATSHLGTQGTGIP 72

Query: 80  GH---PVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
                P      +     V++  E     + +R +  +   +K  H M+   +
Sbjct: 73  VREAKPTETWEVLQSSSAVSLEQEMLKAGDVSRQHNLDTAVVKSFHRMLMAAV 125


>gi|146311252|ref|YP_001176326.1| flagellar hook-associated protein FlgK [Enterobacter sp. 638]
 gi|145318128|gb|ABP60275.1| flagellar hook-associated protein FlgK [Enterobacter sp. 638]
          Length = 546

 Score = 34.5 bits (77), Expect = 4.8,   Method: Composition-based stats.
 Identities = 15/96 (15%), Positives = 33/96 (34%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          + +  + A SGL+   A +  +S NI++    G T  +        +         GV V
Sbjct: 1  MSSLINSAMSGLSAAQASLNTVSNNISSYNVAGYTRQTTVLGAANSTLTGGGWVGNGVYV 60

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
            +  +   F+          ++    +Y  +  + 
Sbjct: 61 NGVQREYDAFITNQLRAAQNQSSGLTTRYQQMAKID 96


>gi|77464882|ref|YP_354386.1| flagellar hook-associated protein FlgK [Rhodobacter sphaeroides
           2.4.1]
 gi|77389300|gb|ABA80485.1| putative flagellar hook protein [Rhodobacter sphaeroides 2.4.1]
          Length = 481

 Score = 34.5 bits (77), Expect = 4.8,   Method: Composition-based stats.
 Identities = 8/38 (21%), Positives = 16/38 (42%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            V+   E   +    R Y AN + +    D++   L++
Sbjct: 444 GVDTDREMEQLLLLERAYAANAKVVTACDDLLQYLLEM 481


>gi|307721136|ref|YP_003892276.1| flagellar hook-basal body protein [Sulfurimonas autotrophica DSM
          16294]
 gi|306979229|gb|ADN09264.1| flagellar hook-basal body protein [Sulfurimonas autotrophica DSM
          16294]
          Length = 273

 Score = 34.5 bits (77), Expect = 4.9,   Method: Composition-based stats.
 Identities = 9/38 (23%), Positives = 17/38 (44%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGS 41
          +    + + +G+  Q  R+  I+ N+AN  T G     
Sbjct: 1  MQTGYYSSAAGMVTQFNRLDTIANNLANVNTNGFKEDQ 38


>gi|296133052|ref|YP_003640299.1| flagellar basal-body rod protein FlgB [Thermincola sp. JR]
 gi|296031630|gb|ADG82398.1| flagellar basal-body rod protein FlgB [Thermincola potens JR]
          Length = 138

 Score = 34.5 bits (77), Expect = 4.9,   Method: Composition-based stats.
 Identities = 19/117 (16%), Positives = 37/117 (31%), Gaps = 2/117 (1%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG--VR 62
             +  +    L   S R + I+ N+AN  T G       +  +            G    
Sbjct: 8   SDTMGLLQRALDAASMRNEAIANNMANVDTPGYKRVDVAFEEELKKAMAANGRLQGLTSD 67

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
            + I +     +E         + +      NV++  ETA + +   +Y   +  I 
Sbjct: 68  PRHIPIGGKKPIEINPRFVRDTDTTMRNDDNNVDIDKETAALAKNQIMYEFLINGIN 124


>gi|302384100|ref|YP_003819923.1| flagellar basal body rod protein [Brevundimonas subvibrioides ATCC
           15264]
 gi|302194728|gb|ADL02300.1| flagellar basal body rod protein [Brevundimonas subvibrioides ATCC
           15264]
          Length = 134

 Score = 34.5 bits (77), Expect = 4.9,   Method: Composition-based stats.
 Identities = 18/108 (16%), Positives = 37/108 (34%), Gaps = 1/108 (0%)

Query: 21  RMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPG 80
           R +++++N+ANA T G     D       +      G  G+         +         
Sbjct: 22  RQRVVAQNVANADTPGY-VARDLKAPTDFAAAMRQGGGLGMARTNAAHLTTGAPVARFTS 80

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
               ++   +   +V V  +   M E+   Y A +   ++S  M+   
Sbjct: 81  SASPDSETTLDGNSVVVEEQMLKMAESRMAYDAAIGLYQKSMSMLRMA 128


>gi|226327749|ref|ZP_03803267.1| hypothetical protein PROPEN_01622 [Proteus penneri ATCC 35198]
 gi|225203453|gb|EEG85807.1| hypothetical protein PROPEN_01622 [Proteus penneri ATCC 35198]
          Length = 136

 Score = 34.5 bits (77), Expect = 4.9,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 48/133 (36%), Gaps = 4/133 (3%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTG-DTPGSDPYRRKTISFEEVMHGSGG 60
           D L  + H     L++++ R +I++ NIANA T G      D       + E    GS G
Sbjct: 3   DKLENTFHFQQEALSIRNKRQEILAANIANADTPGFQARDIDFASELKKTIENGRTGSHG 62

Query: 61  VRVKKIGVDQSTFVEEFDPGHP---VANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           +++             +               +    V++ +E ++  + +  Y A++  
Sbjct: 63  MQLAMTSERHIPIKPGYRLEADLLYRVPHQTAMDGNTVDMDMERSNFADNSLKYQADVTF 122

Query: 118 IKQSHDMMTTTLD 130
           I      M   L 
Sbjct: 123 INSQVKSMMAVLQ 135


>gi|238782789|ref|ZP_04626818.1| Flagellar basal-body rod protein flgB [Yersinia bercovieri ATCC
           43970]
 gi|238716212|gb|EEQ08195.1| Flagellar basal-body rod protein flgB [Yersinia bercovieri ATCC
           43970]
          Length = 135

 Score = 34.5 bits (77), Expect = 4.9,   Method: Composition-based stats.
 Identities = 18/130 (13%), Positives = 40/130 (30%), Gaps = 5/130 (3%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           +D L  +       L + + R  I++ NIAN  T G       + ++  +  +      G
Sbjct: 2   IDKLDNAFRFQQDALRLLTQRQDILASNIANVDTPGYLARDIDFSQQLKTAVDRSAPEKG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPN----VNVLVETADMRETNRLYMANLQ 116
                +         +              +       V++  E  +  + +  Y ++L 
Sbjct: 62  SLSLGLTSGAHIAGMKSRMNDSQLLYRIPDQPSADGNTVDMDRERINFADNSMKYQSSLT 121

Query: 117 TIKQS-HDMM 125
            +      MM
Sbjct: 122 ILSTQIKSMM 131


>gi|329890583|ref|ZP_08268926.1| flagellar basal body rod protein FlgB [Brevundimonas diminuta ATCC
           11568]
 gi|328845884|gb|EGF95448.1| flagellar basal body rod protein FlgB [Brevundimonas diminuta ATCC
           11568]
          Length = 134

 Score = 34.5 bits (77), Expect = 5.0,   Method: Composition-based stats.
 Identities = 20/108 (18%), Positives = 39/108 (36%), Gaps = 7/108 (6%)

Query: 21  RMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG---VRVKKIGVDQSTFVEEF 77
           R ++I++N+AN+     TPG      KT +       +GG   +                
Sbjct: 22  RQRVIAQNVANSD----TPGYVARDLKTPTDFAEAMRTGGGLRMTTTNARHISPPGQAAR 77

Query: 78  DPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
                  ++   +   +V V  +   M E+   Y A +   ++S  M+
Sbjct: 78  FEATRAPDSETTLDGNSVVVEEQMLKMAESRMAYDAAIGFYQKSMQMI 125


>gi|313905162|ref|ZP_07838531.1| flagellar hook-associated protein FlgK [Eubacterium cellulosolvens
           6]
 gi|313470065|gb|EFR65398.1| flagellar hook-associated protein FlgK [Eubacterium cellulosolvens
           6]
          Length = 668

 Score = 34.5 bits (77), Expect = 5.0,   Method: Composition-based stats.
 Identities = 8/40 (20%), Positives = 17/40 (42%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
             V++  E A+M      Y A  + +    + + T L++ 
Sbjct: 628 SGVSLDEEAANMMSYVTSYNAAARLMTTIDETLQTLLNIK 667


>gi|253990130|ref|YP_003041486.1| flagellar basal body rod protein FlgB [Photorhabdus asymbiotica
           subsp. asymbiotica ATCC 43949]
 gi|211639033|emb|CAR67647.1| flagellar basal-body rod protein flgb (putative proximal rod
           protein) [Photorhabdus asymbiotica subsp. asymbiotica
           ATCC 43949]
 gi|253781580|emb|CAQ84743.1| flagellar basal-body rod protein flgb (putative proximal rod
           protein) [Photorhabdus asymbiotica]
          Length = 137

 Score = 34.5 bits (77), Expect = 5.0,   Method: Composition-based stats.
 Identities = 29/133 (21%), Positives = 50/133 (37%), Gaps = 4/133 (3%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR---RKTISFEEVMHGS 58
           D L A+ H     L+++S R +I+S NIANA T G       +    +KTI+   V    
Sbjct: 3   DKLDAAFHFQQEALSLRSRRQEILSANIANADTPGYQARDIDFAAQLKKTIAHGRVTGNG 62

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPN-VNVLVETADMRETNRLYMANLQT 117
            G+ +           +  +               N V++ +E ++  + +  Y A L  
Sbjct: 63  IGLTLTSDRHIPIQPQKRMEMDLLYRVPYQPAMDGNTVDMDMERSNFMDNSLKYQAELTA 122

Query: 118 IKQSHDMMTTTLD 130
                  M + L 
Sbjct: 123 TSSQVKSMMSVLQ 135


>gi|149195180|ref|ZP_01872271.1| flagellar basal-body rod protein B [Caminibacter mediatlanticus
           TB-2]
 gi|149134732|gb|EDM23217.1| flagellar basal-body rod protein B [Caminibacter mediatlanticus
           TB-2]
          Length = 142

 Score = 34.5 bits (77), Expect = 5.0,   Method: Composition-based stats.
 Identities = 31/143 (21%), Positives = 52/143 (36%), Gaps = 16/143 (11%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY-----------RRKTISF 51
            +  S  I    L  +  R  +I+ NIANA T    P    +             K    
Sbjct: 4   EISKSFGIMEQALHYRKIRQDMIASNIANADTPFYRPKDIRFEDALQEEINKKFNKPSKK 63

Query: 52  EEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
            E+   +      K   D    +  F  GH   N        +V++ VET +M + N  Y
Sbjct: 64  LELAKTNPMHLEPKDIEDSYKPIVFFRDGHLARNDGN-----SVDIDVETTEMAKNNIAY 118

Query: 112 MANLQTIKQSHDMMTTTLDLLRD 134
            A +Q +K+  ++    +D  ++
Sbjct: 119 NATIQALKKDIEIFKAVIDSSKN 141


>gi|89902474|ref|YP_524945.1| flagellar basal-body rod protein FlgB [Rhodoferax ferrireducens
           T118]
 gi|89347211|gb|ABD71414.1| flagellar basal-body rod protein FlgB [Rhodoferax ferrireducens
           T118]
          Length = 150

 Score = 34.5 bits (77), Expect = 5.0,   Method: Composition-based stats.
 Identities = 22/148 (14%), Positives = 46/148 (31%), Gaps = 19/148 (12%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           +  + +        L +++ R ++I+ NIANA T G       + +  +        S G
Sbjct: 2   ITNMTSGLDFQAKALVLRAERQRVIASNIANADTPGYVARDLNF-KDAMLQATGADSSSG 60

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGI------------------VKYPNVNVLVETA 102
           +R                P H   +                      +   +V++  E A
Sbjct: 61  LRTGNSNSQGGGANGMTHPHHIALSGGAGASLGGSSHLAYTVQSQPSLDGNSVDLDRERA 120

Query: 103 DMRETNRLYMANLQTIKQSHDMMTTTLD 130
           +  +    Y A L+ I      + + + 
Sbjct: 121 NFTDNAVRYEATLRFINGQSKTLLSAIQ 148


>gi|23499891|ref|NP_699331.1| flagellar basal body rod protein FlgF [Brucella suis 1330]
 gi|148558748|ref|YP_001257194.1| flagellar basal body rod protein FlgF [Brucella ovis ATCC 25840]
 gi|163844323|ref|YP_001621978.1| flagellar basal body rod protein FlgF [Brucella suis ATCC 23445]
 gi|225628603|ref|ZP_03786637.1| flagellar basal body rod protein FlgF [Brucella ceti str. Cudo]
 gi|254699439|ref|ZP_05161267.1| flagellar basal body rod protein FlgF [Brucella suis bv. 5 str.
          513]
 gi|254706314|ref|ZP_05168142.1| flagellar basal body rod protein FlgF [Brucella pinnipedialis
          M163/99/10]
 gi|254711394|ref|ZP_05173205.1| flagellar basal body rod protein FlgF [Brucella pinnipedialis
          B2/94]
 gi|254711993|ref|ZP_05173804.1| flagellar basal body rod protein FlgF [Brucella ceti M644/93/1]
 gi|254715063|ref|ZP_05176874.1| flagellar basal body rod protein FlgF [Brucella ceti M13/05/1]
 gi|256029976|ref|ZP_05443590.1| flagellar basal body rod protein FlgF [Brucella pinnipedialis
          M292/94/1]
 gi|256158141|ref|ZP_05456057.1| flagellar basal body rod protein FlgF [Brucella ceti M490/95/1]
 gi|256252908|ref|ZP_05458444.1| flagellar basal body rod protein FlgF [Brucella ceti B1/94]
 gi|261216770|ref|ZP_05931051.1| flagellar basal body rod protein FlgF [Brucella ceti M13/05/1]
 gi|261219997|ref|ZP_05934278.1| flagellar basal body rod protein FlgF [Brucella ceti B1/94]
 gi|261313761|ref|ZP_05952958.1| flagellar basal body rod protein FlgF [Brucella pinnipedialis
          M163/99/10]
 gi|261319000|ref|ZP_05958197.1| flagellar basal body rod protein FlgF [Brucella pinnipedialis
          B2/94]
 gi|261319637|ref|ZP_05958834.1| flagellar basal body rod protein FlgF [Brucella ceti M644/93/1]
 gi|261749890|ref|ZP_05993599.1| flagellar basal body rod protein FlgF [Brucella suis bv. 5 str.
          513]
 gi|265986997|ref|ZP_06099554.1| flagellar basal body rod protein FlgF [Brucella pinnipedialis
          M292/94/1]
 gi|265996658|ref|ZP_06109215.1| flagellar basal body rod protein FlgF [Brucella ceti M490/95/1]
 gi|294853152|ref|ZP_06793824.1| flagellar basal-body rod protein FlgF [Brucella sp. NVSL 07-0026]
 gi|23463466|gb|AAN33336.1| flagellar basal-body rod protein FlgF [Brucella suis 1330]
 gi|148370033|gb|ABQ62905.1| flagellar basal-body rod protein FlgF [Brucella ovis ATCC 25840]
 gi|163675046|gb|ABY39156.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
 gi|225616449|gb|EEH13497.1| flagellar basal body rod protein FlgF [Brucella ceti str. Cudo]
 gi|260918581|gb|EEX85234.1| flagellar basal body rod protein FlgF [Brucella ceti B1/94]
 gi|260921859|gb|EEX88427.1| flagellar basal body rod protein FlgF [Brucella ceti M13/05/1]
 gi|261292327|gb|EEX95823.1| flagellar basal body rod protein FlgF [Brucella ceti M644/93/1]
 gi|261298223|gb|EEY01720.1| flagellar basal body rod protein FlgF [Brucella pinnipedialis
          B2/94]
 gi|261302787|gb|EEY06284.1| flagellar basal body rod protein FlgF [Brucella pinnipedialis
          M163/99/10]
 gi|261739643|gb|EEY27569.1| flagellar basal body rod protein FlgF [Brucella suis bv. 5 str.
          513]
 gi|262550955|gb|EEZ07116.1| flagellar basal body rod protein FlgF [Brucella ceti M490/95/1]
 gi|264659194|gb|EEZ29455.1| flagellar basal body rod protein FlgF [Brucella pinnipedialis
          M292/94/1]
 gi|294818807|gb|EFG35807.1| flagellar basal-body rod protein FlgF [Brucella sp. NVSL 07-0026]
          Length = 243

 Score = 34.5 bits (77), Expect = 5.0,   Method: Composition-based stats.
 Identities = 14/88 (15%), Positives = 25/88 (28%)

Query: 6  ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
           S ++  S L     RM  I+ N+ANA T G       +                     
Sbjct: 4  NSIYVGLSSLITLERRMDAIAHNVANASTVGFRGEGTKFDTIVSDKASDDVSFATAGKSY 63

Query: 66 IGVDQSTFVEEFDPGHPVANASGIVKYP 93
          I  +    ++  +P          + + 
Sbjct: 64 IRTEAGPLIKTDNPLDVAVKGDAWMSFS 91


>gi|62317080|ref|YP_222933.1| flagellar basal body rod protein FlgF [Brucella abortus bv. 1
          str. 9-941]
 gi|83269073|ref|YP_418364.1| flagellar basal body rod protein FlgF [Brucella melitensis biovar
          Abortus 2308]
 gi|189022347|ref|YP_001932088.1| flagellar basal body rod protein FlgF [Brucella abortus S19]
 gi|225685989|ref|YP_002733961.1| flagellar basal body rod protein FlgF [Brucella melitensis ATCC
          23457]
 gi|237816642|ref|ZP_04595634.1| flagellar basal body rod protein FlgF [Brucella abortus str. 2308
          A]
 gi|254691431|ref|ZP_05154685.1| flagellar basal body rod protein FlgF [Brucella abortus bv. 6
          str. 870]
 gi|254695270|ref|ZP_05157098.1| flagellar basal body rod protein FlgF [Brucella abortus bv. 3
          str. Tulya]
 gi|254698369|ref|ZP_05160197.1| flagellar basal body rod protein FlgF [Brucella abortus bv. 2
          str. 86/8/59]
 gi|254731814|ref|ZP_05190392.1| flagellar basal body rod protein FlgF [Brucella abortus bv. 4
          str. 292]
 gi|256256617|ref|ZP_05462153.1| flagellar basal body rod protein FlgF [Brucella abortus bv. 9
          str. C68]
 gi|256262885|ref|ZP_05465417.1| flagellar basal body rod protein [Brucella melitensis bv. 2 str.
          63/9]
 gi|260544321|ref|ZP_05820142.1| flagellar basal body rod protein [Brucella abortus NCTC 8038]
 gi|260757049|ref|ZP_05869397.1| flagellar basal body rod protein FlgF [Brucella abortus bv. 6
          str. 870]
 gi|260759580|ref|ZP_05871928.1| flagellar basal body rod protein FlgF [Brucella abortus bv. 4
          str. 292]
 gi|260762824|ref|ZP_05875156.1| flagellar basal body rod protein FlgF [Brucella abortus bv. 2
          str. 86/8/59]
 gi|260882859|ref|ZP_05894473.1| flagellar basal body rod protein FlgF [Brucella abortus bv. 9
          str. C68]
 gi|261215636|ref|ZP_05929917.1| flagellar basal body rod protein FlgF [Brucella abortus bv. 3
          str. Tulya]
 gi|297249974|ref|ZP_06933675.1| flagellar basal-body rod protein FlgF [Brucella abortus bv. 5
          str. B3196]
 gi|62197273|gb|AAX75572.1| FlgF, flagellar basal-body rod protein FlgF [Brucella abortus bv.
          1 str. 9-941]
 gi|82939347|emb|CAJ12294.1| Flagellar basal body rod protein [Brucella melitensis biovar
          Abortus 2308]
 gi|189020921|gb|ACD73642.1| Flagellar basal body rod protein [Brucella abortus S19]
 gi|225642094|gb|ACO02007.1| flagellar basal body rod protein [Brucella melitensis ATCC 23457]
 gi|237787455|gb|EEP61671.1| flagellar basal body rod protein FlgF [Brucella abortus str. 2308
          A]
 gi|260097592|gb|EEW81466.1| flagellar basal body rod protein [Brucella abortus NCTC 8038]
 gi|260669898|gb|EEX56838.1| flagellar basal body rod protein FlgF [Brucella abortus bv. 4
          str. 292]
 gi|260673245|gb|EEX60066.1| flagellar basal body rod protein FlgF [Brucella abortus bv. 2
          str. 86/8/59]
 gi|260677157|gb|EEX63978.1| flagellar basal body rod protein FlgF [Brucella abortus bv. 6
          str. 870]
 gi|260872387|gb|EEX79456.1| flagellar basal body rod protein FlgF [Brucella abortus bv. 9
          str. C68]
 gi|260917243|gb|EEX84104.1| flagellar basal body rod protein FlgF [Brucella abortus bv. 3
          str. Tulya]
 gi|263092722|gb|EEZ16931.1| flagellar basal body rod protein [Brucella melitensis bv. 2 str.
          63/9]
 gi|297173843|gb|EFH33207.1| flagellar basal-body rod protein FlgF [Brucella abortus bv. 5
          str. B3196]
 gi|326410315|gb|ADZ67379.1| flagellar basal body rod protein FlgF [Brucella melitensis M28]
 gi|326553608|gb|ADZ88247.1| flagellar basal body rod protein FlgF [Brucella melitensis M5-90]
          Length = 243

 Score = 34.5 bits (77), Expect = 5.0,   Method: Composition-based stats.
 Identities = 14/88 (15%), Positives = 25/88 (28%)

Query: 6  ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
           S ++  S L     RM  I+ N+ANA T G       +                     
Sbjct: 4  NSIYVGLSSLITLERRMDAIAHNVANASTVGFRGEGTKFDTIVSDKASDDVSFATAGKSY 63

Query: 66 IGVDQSTFVEEFDPGHPVANASGIVKYP 93
          I  +    ++  +P          + + 
Sbjct: 64 IRTEAGPLIKTDNPLDVAVKGDAWMSFS 91


>gi|330826761|ref|YP_004390064.1| flagellar hook-associated protein FlgK [Alicycliphilus
          denitrificans K601]
 gi|329312133|gb|AEB86548.1| flagellar hook-associated protein FlgK [Alicycliphilus
          denitrificans K601]
          Length = 660

 Score = 34.5 bits (77), Expect = 5.0,   Method: Composition-based stats.
 Identities = 16/95 (16%), Positives = 31/95 (32%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          ++  ++    L      +Q    NIAN  T G +  S   +     F    +   GV V 
Sbjct: 1  MSLLNVGARALLANQVALQTTGHNIANVSTAGYSRQSVAMQTVQGQFTGSGYIGNGVNVA 60

Query: 65 KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
           I  + +  +           +   V+   ++ L 
Sbjct: 61 TILRNHNELLTRQAAAAQAVQSGDSVRAERLSQLQ 95


>gi|288574709|ref|ZP_06393066.1| flagellar hook-associated protein FlgK [Dethiosulfovibrio
           peptidovorans DSM 11002]
 gi|288570450|gb|EFC92007.1| flagellar hook-associated protein FlgK [Dethiosulfovibrio
           peptidovorans DSM 11002]
          Length = 856

 Score = 34.5 bits (77), Expect = 5.0,   Method: Composition-based stats.
 Identities = 6/41 (14%), Positives = 18/41 (43%), Gaps = 1/41 (2%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD-LLR 133
            VN+  E   + +  + + A  + +    +M+   ++ + R
Sbjct: 813 GVNIDEEMMQIMQFQQSFNAISRYVTTLDEMLDRVINGMGR 853


>gi|209521590|ref|ZP_03270288.1| flagellar basal-body rod protein FlgF [Burkholderia sp. H160]
 gi|209497973|gb|EDZ98130.1| flagellar basal-body rod protein FlgF [Burkholderia sp. H160]
          Length = 252

 Score = 34.5 bits (77), Expect = 5.0,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 16/43 (37%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           ++  NVN +     M    R +    Q ++ +     +   LL
Sbjct: 207 LEGSNVNPVNAMVSMITNARQFQMQTQLLENADKNDQSANQLL 249


>gi|313624924|gb|EFR94832.1| flagellar basal body rod protein FlgG [Listeria innocua FSL J1-023]
          Length = 259

 Score = 34.5 bits (77), Expect = 5.1,   Method: Composition-based stats.
 Identities = 13/98 (13%), Positives = 31/98 (31%), Gaps = 1/98 (1%)

Query: 30  ANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGI 89
           AN     +   +    R    F         V+  +  +  +       P       +G+
Sbjct: 155 ANGDLY-NAETNQYLGRLGTKFVSANQVDNLVKDGEGRLHVNGINTMNLPAGQGNIQNGV 213

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
           ++  NV++ VE   + +  R+  A+   +     +   
Sbjct: 214 LETSNVDLGVEMVQLMDNQRMVQASKNVVNMFDKVYDK 251


>gi|108562780|ref|YP_627096.1| flagellar basal-body rod protein [Helicobacter pylori HPAG1]
 gi|107836553|gb|ABF84422.1| flagellar basal-body rod protein [Helicobacter pylori HPAG1]
          Length = 269

 Score = 34.5 bits (77), Expect = 5.1,   Method: Composition-based stats.
 Identities = 11/60 (18%), Positives = 21/60 (35%), Gaps = 1/60 (1%)

Query: 72  TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ-SHDMMTTTLD 130
                       A    +++  NVN + E + + E NR      + +K    DM    ++
Sbjct: 204 QGEGIHQVSDSGALRQYMLEKSNVNAVREMSALIEINRFLDMYSKVLKTHQDDMNAEAIN 263


>gi|126463724|ref|YP_001044838.1| flagellar hook-associated protein FlgK [Rhodobacter sphaeroides
           ATCC 17029]
 gi|126105388|gb|ABN78066.1| flagellar hook-associated protein FlgK [Rhodobacter sphaeroides
           ATCC 17029]
          Length = 481

 Score = 34.5 bits (77), Expect = 5.1,   Method: Composition-based stats.
 Identities = 8/38 (21%), Positives = 16/38 (42%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            V+   E   +    R Y AN + +    D++   L++
Sbjct: 444 GVDTDREMEQLLLLERAYAANAKVVTACDDLLQYLLEM 481


>gi|288958674|ref|YP_003449015.1| flagellar basal-body rod protein [Azospirillum sp. B510]
 gi|288910982|dbj|BAI72471.1| flagellar basal-body rod protein [Azospirillum sp. B510]
          Length = 240

 Score = 34.5 bits (77), Expect = 5.1,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 1/48 (2%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD-LLR 133
            G+++  NV  +VE   M +  R YM+  + I   H+ + T +  L R
Sbjct: 191 QGLLEGSNVKPVVEMTQMIDIQRQYMSAQKMIDNEHERIRTMIQRLGR 238


>gi|291277449|ref|YP_003517221.1| putative flagellar basal-body rod protein [Helicobacter mustelae
           12198]
 gi|290964643|emb|CBG40497.1| putative flagellar basal-body rod protein [Helicobacter mustelae
           12198]
          Length = 146

 Score = 34.5 bits (77), Expect = 5.2,   Method: Composition-based stats.
 Identities = 26/127 (20%), Positives = 49/127 (38%), Gaps = 6/127 (4%)

Query: 14  GLAVQSARMQIISENIANARTTGDTPGSDPY-----RRKTISFEEVMHGSGGVRVKKIGV 68
            L  +S R  +I+ NIAN  T    P    +     + K   F+   H    +       
Sbjct: 19  ALDYRSMRQDLIASNIANVDTPFYRPKDIDFEHYLAQEKARIFDNKPHLELEMAQTSKNH 78

Query: 69  DQSTFVEEFDPGHPVANASGIVKYPN-VNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
            +    + + P     +        N V++ VET++M + + +Y A    +K+   + T 
Sbjct: 79  LKGGDTQSYRPTTFFRDGHLARNDGNSVDLDVETSEMGKNSIMYQALTTALKKHRGIFTY 138

Query: 128 TLDLLRD 134
            +D  R+
Sbjct: 139 AIDSGRN 145


>gi|222095367|ref|YP_002529427.1| flagellar basal body rod protein flgb [Bacillus cereus Q1]
 gi|221239425|gb|ACM12135.1| flagellar basal-body rod protein FlgB [Bacillus cereus Q1]
          Length = 172

 Score = 34.5 bits (77), Expect = 5.2,   Method: Composition-based stats.
 Identities = 17/121 (14%), Positives = 37/121 (30%), Gaps = 7/121 (5%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFV 74
           +     +   +S NIANA T G       +  +      +   +         + Q+  +
Sbjct: 49  MNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQMNKSSALYKSNTADLKTNADLYQTNEM 108

Query: 75  EEFDPGHPVA-------NASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
                            +        +V+V  E  D+ + N+LY  ++  I   + +   
Sbjct: 109 HLPTVNAKNTYAKIQTKSMQTNKDGNSVDVTTEMLDLMKANQLYGISINAINTQYAINQA 168

Query: 128 T 128
            
Sbjct: 169 A 169


>gi|149201615|ref|ZP_01878589.1| FlgK flagellar hook-associated protein 1 [Roseovarius sp. TM1035]
 gi|149144663|gb|EDM32692.1| FlgK flagellar hook-associated protein 1 [Roseovarius sp. TM1035]
          Length = 1335

 Score = 34.5 bits (77), Expect = 5.2,   Method: Composition-based stats.
 Identities = 18/96 (18%), Positives = 29/96 (30%), Gaps = 8/96 (8%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          ++    I   G+      + +  ENIAN  T G         R+  +  + +   GGV V
Sbjct: 1  MVDLMDIGRGGVLAYRTALGVTGENIANVDTAG--------YRRRDAVMQEVGVGGGVDV 52

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
            I       V            +      +V  L 
Sbjct: 53 VDIRRAFDGLVAARSRDAQSTLGAAETHLSHVQALE 88


>gi|116694216|ref|YP_728427.1| flagellar basal body rod protein FlgB [Ralstonia eutropha H16]
 gi|113528715|emb|CAJ95062.1| flagellar basal body protein [Ralstonia eutropha H16]
          Length = 135

 Score = 34.5 bits (77), Expect = 5.2,   Method: Composition-based stats.
 Identities = 22/133 (16%), Positives = 42/133 (31%), Gaps = 3/133 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           +D L A+       L++++ R  +I+ NIA+A T G       +        E  H + G
Sbjct: 2   IDRLDAALRFQQEALSLRNQRQSVIASNIAHADTPGYKARDFDFSSTLAQSVERGHRNEG 61

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVA---NASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           + +    V              +A        V    V +  E     +    + + L  
Sbjct: 62  MSLSTTSVRHLPAQAPGREEFDLAYRIPLQSSVDGNTVEMDAERVAFADNAVHFESGLTV 121

Query: 118 IKQSHDMMTTTLD 130
           +      M   + 
Sbjct: 122 MNSKIKTMLAAIQ 134


>gi|224373714|ref|YP_002608086.1| flagellar basal body rod protein FlgB [Nautilia profundicola AmH]
 gi|223588710|gb|ACM92446.1| flagellar basal-body rod protein FlgB [Nautilia profundicola AmH]
          Length = 143

 Score = 34.5 bits (77), Expect = 5.3,   Method: Composition-based stats.
 Identities = 29/144 (20%), Positives = 52/144 (36%), Gaps = 17/144 (11%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPG------------SDPYRRKTIS 50
            +  S  I    L  +  R  +I+ NIANA T    P                +  +T  
Sbjct: 4   EISKSFDILEKSLHYRKIRQDMIASNIANADTPYYRPKDIRFEEALQAEVDKKFNIRTAP 63

Query: 51  FEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRL 110
             E+     G          +  +  +  GH   N        +V++ VET +M + N  
Sbjct: 64  KLELAKTEPGHMAAPDESSDAKPIVFYRDGHLARNDGN-----SVDIDVETTEMAKNNIA 118

Query: 111 YMANLQTIKQSHDMMTTTLDLLRD 134
           Y A +Q +++  D+    +D  ++
Sbjct: 119 YNAAIQALRKDIDIFKAVIDSSKN 142


>gi|222112279|ref|YP_002554543.1| flagellar hook-associated protein flgk [Acidovorax ebreus TPSY]
 gi|221731723|gb|ACM34543.1| flagellar hook-associated protein FlgK [Acidovorax ebreus TPSY]
          Length = 672

 Score = 34.5 bits (77), Expect = 5.3,   Method: Composition-based stats.
 Identities = 15/88 (17%), Positives = 28/88 (31%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          ++  ++    L      +Q    NIAN  T G +  +         F    +   GV+V 
Sbjct: 1  MSLLNVGARALLANQVALQTTGHNIANVSTAGYSRQNVAMETVQGQFTGSGYIGNGVQVA 60

Query: 65 KIGVDQSTFVEEFDPGHPVANASGIVKY 92
           I  + +  +           A   V+ 
Sbjct: 61 TILRNHNELLTRQAAAAQAVQAGDTVRA 88


>gi|121607560|ref|YP_995367.1| flagellar basal-body rod protein FlgF [Verminephrobacter eiseniae
           EF01-2]
 gi|121552200|gb|ABM56349.1| flagellar basal-body rod protein FlgF [Verminephrobacter eiseniae
           EF01-2]
          Length = 246

 Score = 34.5 bits (77), Expect = 5.3,   Method: Composition-based stats.
 Identities = 13/101 (12%), Positives = 25/101 (24%), Gaps = 4/101 (3%)

Query: 32  ARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVK 91
           +      P     R K  +         G                          +G ++
Sbjct: 146 SAKVAGQPAQTVGRLKLATPGAEDPLQRGGDGLFRTASGEPLPS----DADARMLAGALE 201

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
             NVN +     M    R +   +Q ++ +     +   LL
Sbjct: 202 GSNVNPVECMVGMIAAARQFEQQMQLLQTAQTNDKSASRLL 242


>gi|160878463|ref|YP_001557431.1| flagellar hook-associated protein FlgK [Clostridium
          phytofermentans ISDg]
 gi|160427129|gb|ABX40692.1| flagellar hook-associated protein FlgK [Clostridium
          phytofermentans ISDg]
          Length = 620

 Score = 34.5 bits (77), Expect = 5.3,   Method: Composition-based stats.
 Identities = 11/50 (22%), Positives = 18/50 (36%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISF 51
            L++S ++  SGL V    +     N+AN  T G        +      
Sbjct: 1  MSLMSSLYVGVSGLQVSQNGLNTTGHNLANVETEGYVRQQTVLQTSQYRT 50


>gi|92116937|ref|YP_576666.1| flagellar basal body rod protein FlgF [Nitrobacter hamburgensis
           X14]
 gi|91799831|gb|ABE62206.1| flagellar basal body rod protein [Nitrobacter hamburgensis X14]
          Length = 255

 Score = 34.5 bits (77), Expect = 5.3,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 23/53 (43%)

Query: 78  DPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            P        G ++  NVN + E + M E +R Y      ++Q  D+  + ++
Sbjct: 196 RPDTSARVHQGFIEKSNVNAVTEMSRMVEVSRAYTQMATLLQQQSDLQRSAIE 248


>gi|269138579|ref|YP_003295279.1| flagellar basal-body rod protein [Edwardsiella tarda EIB202]
 gi|267984239|gb|ACY84068.1| flagellar basal-body rod protein [Edwardsiella tarda EIB202]
 gi|304558589|gb|ADM41253.1| Flagellar basal-body rod protein FlgB [Edwardsiella tarda FL6-60]
          Length = 137

 Score = 34.5 bits (77), Expect = 5.3,   Method: Composition-based stats.
 Identities = 23/132 (17%), Positives = 43/132 (32%), Gaps = 5/132 (3%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
           D L A+       L +++ R +I++ NIANA T G       +  +     E     G  
Sbjct: 3   DKLDAAFRFQQEALNLRAQRQEILAANIANADTPGYQARDIDFASQLSRVLEQGRPDGSG 62

Query: 62  RVKKIGVDQSTFVEEFDPGH----PVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
               +   +    +   P              +    V++  E     + +  Y  +L  
Sbjct: 63  IALSLTSSRHIPAQTLQPPSLDLLFRVPDQPSLDGNTVDMDRERTQFADNSLRYQTDLTV 122

Query: 118 IK-QSHDMMTTT 128
           +  Q   MM+  
Sbjct: 123 LSGQIKSMMSVL 134


>gi|228952123|ref|ZP_04114218.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
 gi|229043497|ref|ZP_04191207.1| Flagellar basal-body rod protein [Bacillus cereus AH676]
 gi|229109200|ref|ZP_04238799.1| Flagellar basal-body rod protein [Bacillus cereus Rock1-15]
 gi|229127069|ref|ZP_04256068.1| Flagellar basal-body rod protein [Bacillus cereus BDRD-Cer4]
 gi|229144355|ref|ZP_04272761.1| Flagellar basal-body rod protein [Bacillus cereus BDRD-ST24]
 gi|228639142|gb|EEK95566.1| Flagellar basal-body rod protein [Bacillus cereus BDRD-ST24]
 gi|228656422|gb|EEL12261.1| Flagellar basal-body rod protein [Bacillus cereus BDRD-Cer4]
 gi|228674210|gb|EEL29455.1| Flagellar basal-body rod protein [Bacillus cereus Rock1-15]
 gi|228725875|gb|EEL77122.1| Flagellar basal-body rod protein [Bacillus cereus AH676]
 gi|228807655|gb|EEM54179.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
          Length = 147

 Score = 34.5 bits (77), Expect = 5.3,   Method: Composition-based stats.
 Identities = 17/121 (14%), Positives = 37/121 (30%), Gaps = 7/121 (5%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFV 74
           +     +   +S NIANA T G       +  +      +   +         + Q+  +
Sbjct: 24  MNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQMNKSSALYKNNAADLKSNPDLYQTNEM 83

Query: 75  EEFDPGHPVA-------NASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
                            +        +V+V  E  D+ + N+LY  ++  I   + +   
Sbjct: 84  HLPTVNTKNTYAKIQTKSMQTNKDGNSVDVTTEMLDLMKANQLYGISINAINTQYAINQA 143

Query: 128 T 128
            
Sbjct: 144 A 144


>gi|229149945|ref|ZP_04278173.1| Flagellar basal-body rod protein [Bacillus cereus m1550]
 gi|228633626|gb|EEK90227.1| Flagellar basal-body rod protein [Bacillus cereus m1550]
          Length = 147

 Score = 34.5 bits (77), Expect = 5.3,   Method: Composition-based stats.
 Identities = 17/121 (14%), Positives = 37/121 (30%), Gaps = 7/121 (5%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFV 74
           +     +   +S NIANA T G       +  +      +   +         + Q+  +
Sbjct: 24  MNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQMNKSSALYKNNAADLKSNPDLYQTNEM 83

Query: 75  EEFDPGHPVA-------NASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
                            +        +V+V  E  D+ + N+LY  ++  I   + +   
Sbjct: 84  HLPTVNTKNTYAKIQTKSMQTNKDGNSVDVTTEMLDLMKANQLYGISINAINTQYAINQA 143

Query: 128 T 128
            
Sbjct: 144 A 144


>gi|319787124|ref|YP_004146599.1| flagellar basal-body rod protein FlgB [Pseudoxanthomonas
          suwonensis 11-1]
 gi|317465636|gb|ADV27368.1| flagellar basal-body rod protein FlgB [Pseudoxanthomonas
          suwonensis 11-1]
          Length = 139

 Score = 34.5 bits (77), Expect = 5.3,   Method: Composition-based stats.
 Identities = 16/87 (18%), Positives = 34/87 (39%), Gaps = 7/87 (8%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
          + + +   +    L ++  RM++I+ N+ANA T G       Y+ + + F   +  +   
Sbjct: 3  NPISSYMGVHADALPLREQRMKLIASNLANADTPG-------YKAQDLDFNAALDAATRS 55

Query: 62 RVKKIGVDQSTFVEEFDPGHPVANASG 88
          R   +           +     A A+G
Sbjct: 56 RTGGVANGPGVPAATHESHLQDAIATG 82


>gi|285018722|ref|YP_003376433.1| hypothetical protein XALc_1955 [Xanthomonas albilineans GPE PC73]
 gi|283473940|emb|CBA16441.1| hypothetical protein XALc_1955 [Xanthomonas albilineans]
          Length = 102

 Score = 34.5 bits (77), Expect = 5.3,   Method: Composition-based stats.
 Identities = 20/119 (16%), Positives = 42/119 (35%), Gaps = 31/119 (26%)

Query: 14  GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTF 73
           G+   ++ +Q+ + NIAN  T G       ++R      E    +GG  V ++ V     
Sbjct: 14  GMRAAASGLQVRANNIANLATDG-------FQRAVPVDHE---SAGGGVVSQVQVAD--- 60

Query: 74  VEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
                                 +++ +          + AN + ++ + D +   LD+L
Sbjct: 61  ------------------GQGSDMVDDMVGGLSARNAFQANARVLRAADDSLGHLLDVL 101


>gi|126734106|ref|ZP_01749853.1| flagellar basal-body rod protein FlgF, putative [Roseobacter sp.
           CCS2]
 gi|126716972|gb|EBA13836.1| flagellar basal-body rod protein FlgF, putative [Roseobacter sp.
           CCS2]
          Length = 238

 Score = 34.5 bits (77), Expect = 5.3,   Method: Composition-based stats.
 Identities = 10/62 (16%), Positives = 23/62 (37%)

Query: 72  TFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
                F+         G ++  NVN +++   M E  R Y      + +  + + + +  
Sbjct: 176 DARGGFEAAPDGRMLQGFLEGSNVNPILQIGRMIEVQRAYELGQSFLDKEDERIRSVIQA 235

Query: 132 LR 133
           +R
Sbjct: 236 IR 237


>gi|322832570|ref|YP_004212597.1| flagellar hook-associated protein FlgK [Rahnella sp. Y9602]
 gi|321167771|gb|ADW73470.1| flagellar hook-associated protein FlgK [Rahnella sp. Y9602]
          Length = 550

 Score = 34.5 bits (77), Expect = 5.4,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 25/70 (35%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
           + A SGL    A +     NIAN    G    +    +         +   GV V  + 
Sbjct: 6  INTAMSGLNAAQAALSTTGNNIANVSVAGYNRQTAIITQSNGISTPAGYIGNGVTVTGVN 65

Query: 68 VDQSTFVEEF 77
           + ++FV + 
Sbjct: 66 REYNSFVVKQ 75


>gi|313904267|ref|ZP_07837645.1| flagellar basal-body rod protein FlgB [Eubacterium cellulosolvens
           6]
 gi|313470817|gb|EFR66141.1| flagellar basal-body rod protein FlgB [Eubacterium cellulosolvens
           6]
          Length = 131

 Score = 34.5 bits (77), Expect = 5.4,   Method: Composition-based stats.
 Identities = 19/102 (18%), Positives = 33/102 (32%), Gaps = 1/102 (0%)

Query: 20  ARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDP 79
            R  I   NIAN  T         +   T++    +   G VR  +              
Sbjct: 21  QRQNITVNNIANVDTPKFKSQYLTFE-DTLASRIRLAKKGTVRAGEADEIDRAIRHTTAT 79

Query: 80  GHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
            H   N +  +   NV++  E   + +T   Y   + ++  S
Sbjct: 80  VHTTDNETSRLDGNNVDMDQEQVSLAKTAYEYQMLVNSVSNS 121


>gi|126668555|ref|ZP_01739509.1| flagellar basal-body rod protein B [Marinobacter sp. ELB17]
 gi|126626960|gb|EAZ97603.1| flagellar basal-body rod protein B [Marinobacter sp. ELB17]
          Length = 136

 Score = 34.5 bits (77), Expect = 5.4,   Method: Composition-based stats.
 Identities = 18/128 (14%), Positives = 38/128 (29%), Gaps = 3/128 (2%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR---RKTISFEEVMHGSGGVR 62
           ++  I    L  +  R +I++ N+ANA T G       ++   ++  S       +    
Sbjct: 7   SALGIHQYALQARVQRAEILANNLANADTPGFKARDIDFQAIMKRAQSNASGFGMNTTNS 66

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSH 122
                   +      +           V    V+   E +        Y A+ Q +    
Sbjct: 67  GHITEGGGAPGSLGDNDLLYRTPHQPSVDGNTVDAQQEQSRFMRNAMDYQASFQFLSSKF 126

Query: 123 DMMTTTLD 130
             ++  L 
Sbjct: 127 SGISKALT 134


>gi|114330367|ref|YP_746589.1| flagellar hook-associated protein FlgK [Nitrosomonas eutropha C91]
 gi|114307381|gb|ABI58624.1| flagellar hook-associated protein FlgK [Nitrosomonas eutropha C91]
          Length = 467

 Score = 34.5 bits (77), Expect = 5.4,   Method: Composition-based stats.
 Identities = 9/40 (22%), Positives = 21/40 (52%)

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
              VN+  E A++    R++ A+ + I+ S+ +  + L +
Sbjct: 428 LSGVNLEEEAANLLRYQRMFQASSKVIEISNSLFDSLLRI 467



 Score = 33.7 bits (75), Expect = 7.9,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 21/61 (34%)

Query: 6  ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
          +  ++  SGL      +   S NI+NA T G           T           GV+V  
Sbjct: 4  SIMNVGVSGLQAAQTALLTTSHNISNATTPGYNRQQAIQSTNTPLPHSNGFIGRGVQVST 63

Query: 66 I 66
          +
Sbjct: 64 V 64


>gi|228964720|ref|ZP_04125827.1| Flagellar hook-associated protein FlgK [Bacillus thuringiensis
          serovar sotto str. T04001]
 gi|228794970|gb|EEM42469.1| Flagellar hook-associated protein FlgK [Bacillus thuringiensis
          serovar sotto str. T04001]
          Length = 287

 Score = 34.5 bits (77), Expect = 5.4,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 30/91 (32%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
          +   SG+      +Q   +N++N  T G       Y     S         G  V+ +GV
Sbjct: 7  NTPLSGMLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGSVGASNGHTPEQRIGYGVQTLGV 66

Query: 69 DQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
          D+ T   +    +   +      Y N  +  
Sbjct: 67 DRITDEVKTKQFNDQLSQLSYYNYMNSTLSR 97


>gi|213421023|ref|ZP_03354089.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp.
           enterica serovar Typhi str. E01-6750]
          Length = 301

 Score = 34.5 bits (77), Expect = 5.4,   Method: Composition-based stats.
 Identities = 8/39 (20%), Positives = 21/39 (53%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN+  E  +++   + Y+AN Q ++ ++ +    L++
Sbjct: 262 SGVNLDEEYGNLQRYQQYYLANAQVLQTANALFDALLNI 300


>gi|167630286|ref|YP_001680785.1| flagellar basal-body rod protein flgb, putative [Heliobacterium
          modesticaldum Ice1]
 gi|167593026|gb|ABZ84774.1| flagellar basal-body rod protein flgb, putative [Heliobacterium
          modesticaldum Ice1]
          Length = 137

 Score = 34.5 bits (77), Expect = 5.4,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 27/64 (42%), Gaps = 7/64 (10%)

Query: 14 GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTF 73
          GL   S R Q+I++N+AN  T G       Y+RK + FE+ +          +   +S  
Sbjct: 16 GLDAASTRHQVIADNLANVDTPG-------YKRKEVQFEDELAAVIDREASGMTGKRSDP 68

Query: 74 VEEF 77
              
Sbjct: 69 RHIP 72


>gi|253998491|ref|YP_003050554.1| flagellar basal-body rod protein FlgB [Methylovorus sp. SIP3-4]
 gi|313200566|ref|YP_004039224.1| flagellar basal-body rod protein flgb [Methylovorus sp. MP688]
 gi|253985170|gb|ACT50027.1| flagellar basal-body rod protein FlgB [Methylovorus sp. SIP3-4]
 gi|312439882|gb|ADQ83988.1| flagellar basal-body rod protein FlgB [Methylovorus sp. MP688]
          Length = 142

 Score = 34.5 bits (77), Expect = 5.5,   Method: Composition-based stats.
 Identities = 30/134 (22%), Positives = 43/134 (32%), Gaps = 20/134 (14%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGD---------------TPGSDPYR 45
           M+ L A+     S L V++ R ++I+ NIANA T                  +    P  
Sbjct: 1   MNRLDAALAFQQSALRVRAQRQELIAANIANADTPNYKARDINFNDALNNALSGNDTPGS 60

Query: 46  RKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
              +S     H SG                 F P        G V    V++ VE     
Sbjct: 61  GLDVSKTSSAHLSGDPTSVDYVPTGKPGEPMFRPL-----IQGSVDGNTVDMDVERNQFT 115

Query: 106 ETNRLYMANLQTIK 119
           +    Y A+L  I 
Sbjct: 116 DNAIRYEASLNMIN 129


>gi|168333624|ref|ZP_02691884.1| flagellar hook-associated protein FlgK [Epulopiscium sp. 'N.t.
           morphotype B']
          Length = 544

 Score = 34.5 bits (77), Expect = 5.5,   Method: Composition-based stats.
 Identities = 5/38 (13%), Positives = 16/38 (42%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             V+   E  ++ + N  Y  + + +    ++   T++
Sbjct: 502 SGVDNNEEFMNLIKYNMAYQISAKVMSTLDNIYDITIN 539


>gi|75760642|ref|ZP_00740670.1| Flagellar hook-associated protein 1 [Bacillus thuringiensis
          serovar israelensis ATCC 35646]
 gi|74491856|gb|EAO55044.1| Flagellar hook-associated protein 1 [Bacillus thuringiensis
          serovar israelensis ATCC 35646]
          Length = 208

 Score = 34.5 bits (77), Expect = 5.5,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 30/91 (32%)

Query: 9  HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
          +   SG+      +Q   +N++N  T G       Y     S         G  V+ +GV
Sbjct: 7  NTPLSGMLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGSVGASNGHTPEQRIGYGVQTLGV 66

Query: 69 DQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
          D+ T   +    +   +      Y N  +  
Sbjct: 67 DRITDEVKTKQFNDQLSQLSYYNYMNSTLSR 97


>gi|260574406|ref|ZP_05842410.1| flagellar basal body rod protein [Rhodobacter sp. SW2]
 gi|259023302|gb|EEW26594.1| flagellar basal body rod protein [Rhodobacter sp. SW2]
          Length = 126

 Score = 34.5 bits (77), Expect = 5.6,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 36/109 (33%), Gaps = 6/109 (5%)

Query: 21  RMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPG 80
           R ++I+ N+ANA T G      P         E      G          +       P 
Sbjct: 21  RQEVIARNVANADTPGFKAQDLPDFA------ETYQAGEGAMRATRPGHITAPDLASLPV 74

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
              AN S       V++  E     E  + +   L   + S D++ T+L
Sbjct: 75  PRTANGSASPNGNTVSLESEMVKAVEVRQQHDMALAIYRNSSDILRTSL 123


>gi|261409644|ref|YP_003245885.1| flagellar hook-associated protein FlgK [Paenibacillus sp. Y412MC10]
 gi|261286107|gb|ACX68078.1| flagellar hook-associated protein FlgK [Paenibacillus sp. Y412MC10]
          Length = 520

 Score = 34.5 bits (77), Expect = 5.6,   Method: Composition-based stats.
 Identities = 4/38 (10%), Positives = 15/38 (39%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             V++  E +++ +    Y A  + +      +   ++
Sbjct: 476 SGVSLDEEMSNLIKLQHSYGAASRFMTTVDQNLDKIIN 513



 Score = 33.7 bits (75), Expect = 9.4,   Method: Composition-based stats.
 Identities = 17/88 (19%), Positives = 22/88 (25%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
          M         A   L  Q A M     NIANA T G +                M+    
Sbjct: 1  MVSTFHGIETAKRSLFAQMAGMNTTGHNIANASTPGYSRQVVGLIASRPLAMPGMYNQIS 60

Query: 61 VRVKKIGVDQSTFVEEFDPGHPVANASG 88
                GV+ +      D        + 
Sbjct: 61 PGQLGTGVEVNYIKRVRDQFLDQQYWNA 88


>gi|209884527|ref|YP_002288384.1| flagellar basal body rod protein [Oligotropha carboxidovorans OM5]
 gi|209872723|gb|ACI92519.1| flagellar basal body rod protein [Oligotropha carboxidovorans OM5]
          Length = 255

 Score = 34.5 bits (77), Expect = 5.6,   Method: Composition-based stats.
 Identities = 11/61 (18%), Positives = 20/61 (32%)

Query: 70  QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
            +                G ++  NVN + E + M E  R Y      ++Q  D+    +
Sbjct: 188 TAPANVTGQDDTVSTVKQGFIERSNVNAIAEMSRMLEITRTYQNISNLMQQQADLRKNAI 247

Query: 130 D 130
            
Sbjct: 248 Q 248


>gi|167750706|ref|ZP_02422833.1| hypothetical protein EUBSIR_01684 [Eubacterium siraeum DSM 15702]
 gi|167656385|gb|EDS00515.1| hypothetical protein EUBSIR_01684 [Eubacterium siraeum DSM 15702]
          Length = 235

 Score = 34.5 bits (77), Expect = 5.6,   Method: Composition-based stats.
 Identities = 9/38 (23%), Positives = 16/38 (42%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
           +  NV+   E   + ET RL+ A+   +K    +    
Sbjct: 191 EKSNVDANKEITSLMETQRLFEASSAVLKYMDTINGRA 228


>gi|163742543|ref|ZP_02149929.1| flagellar basal-body rod protein FlgF [Phaeobacter gallaeciensis
           2.10]
 gi|161384128|gb|EDQ08511.1| flagellar basal-body rod protein FlgF [Phaeobacter gallaeciensis
           2.10]
          Length = 238

 Score = 34.5 bits (77), Expect = 5.6,   Method: Composition-based stats.
 Identities = 10/49 (20%), Positives = 20/49 (40%), Gaps = 1/49 (2%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL-DLLRD 134
            G ++  NVN + + A M E  R Y      ++     +   + +L + 
Sbjct: 190 QGFLEGSNVNAISQLARMVEIQRAYEMGQSFLETEDQRVRNAIKNLTKS 238


>gi|330826756|ref|YP_004390059.1| flagellar basal-body rod protein FlgF [Alicycliphilus denitrificans
           K601]
 gi|329312128|gb|AEB86543.1| flagellar basal-body rod protein FlgF [Alicycliphilus denitrificans
           K601]
          Length = 246

 Score = 34.5 bits (77), Expect = 5.6,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 18/43 (41%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           ++  NVN +     M    R +   ++ ++ + +   T   LL
Sbjct: 200 LEGSNVNPVESMVGMIAAARQFEQQMRLLQTAENDDKTASQLL 242


>gi|256059629|ref|ZP_05449826.1| flagellar basal body rod protein FlgF [Brucella neotomae 5K33]
 gi|261323599|ref|ZP_05962796.1| flagellar basal body rod protein FlgF [Brucella neotomae 5K33]
 gi|261299579|gb|EEY03076.1| flagellar basal body rod protein FlgF [Brucella neotomae 5K33]
          Length = 243

 Score = 34.5 bits (77), Expect = 5.6,   Method: Composition-based stats.
 Identities = 14/88 (15%), Positives = 25/88 (28%)

Query: 6  ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
           S ++  S L     RM  I+ N+ANA T G       +                     
Sbjct: 4  NSIYVGLSSLITLERRMDAIAHNVANASTVGFRGEGTKFDTIVSDKASDDVSFATAGKSY 63

Query: 66 IGVDQSTFVEEFDPGHPVANASGIVKYP 93
          I  +    ++  +P          + + 
Sbjct: 64 IRTEAGPLIKTDNPLDVAVKGDAWMSFS 91


>gi|217965220|ref|YP_002350898.1| flagellar basal body rod protein [Listeria monocytogenes HCC23]
 gi|290893977|ref|ZP_06556952.1| flagellar basal body rod protein FlgG [Listeria monocytogenes FSL
           J2-071]
 gi|217334490|gb|ACK40284.1| flagellar basal body rod protein [Listeria monocytogenes HCC23]
 gi|290556423|gb|EFD89962.1| flagellar basal body rod protein FlgG [Listeria monocytogenes FSL
           J2-071]
 gi|307570221|emb|CAR83400.1| flagellar basal-body rod protein, putative [Listeria monocytogenes
           L99]
          Length = 259

 Score = 34.5 bits (77), Expect = 5.6,   Method: Composition-based stats.
 Identities = 14/98 (14%), Positives = 30/98 (30%), Gaps = 1/98 (1%)

Query: 30  ANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGI 89
           AN        G     R    F         V+  +  +  +       P       +G+
Sbjct: 155 ANGDLYNAETGQ-YLGRLGTKFVSANQADSLVKDGEGRLHVNGINTMNLPAGQGIIQNGV 213

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
           ++  NV++ VE   + +  R+  A+   +     +   
Sbjct: 214 IETSNVDLGVEMVQLMDNQRMVQASKNVVNMFDKVYDK 251


>gi|163738061|ref|ZP_02145477.1| hypothetical protein RGBS107_06604 [Phaeobacter gallaeciensis
           BS107]
 gi|161388677|gb|EDQ13030.1| hypothetical protein RGBS107_06604 [Phaeobacter gallaeciensis
           BS107]
          Length = 238

 Score = 34.5 bits (77), Expect = 5.6,   Method: Composition-based stats.
 Identities = 10/49 (20%), Positives = 20/49 (40%), Gaps = 1/49 (2%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL-DLLRD 134
            G ++  NVN + + A M E  R Y      ++     +   + +L + 
Sbjct: 190 QGFLEGSNVNAISQLARMVEIQRAYEMGQSFLETEDQRVRNAIKNLTKS 238


>gi|149375027|ref|ZP_01892800.1| Flagellar hook-associated protein [Marinobacter algicola DG893]
 gi|149360916|gb|EDM49367.1| Flagellar hook-associated protein [Marinobacter algicola DG893]
          Length = 682

 Score = 34.5 bits (77), Expect = 5.6,   Method: Composition-based stats.
 Identities = 12/70 (17%), Positives = 24/70 (34%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +    +I  +G+    A +     NI NA T G +     +  ++           GV +
Sbjct: 1  MAGLINIGLTGILGHQAALNTTGNNITNANTPGYSRQEVQFETQSAQRTGAGSVGTGVSI 60

Query: 64 KKIGVDQSTF 73
            I    + +
Sbjct: 61 TNIRRLANEY 70


>gi|46906933|ref|YP_013322.1| flagellar basal body rod protein FlgG [Listeria monocytogenes
           serotype 4b str. F2365]
 gi|46880199|gb|AAT03499.1| putative flagellar basal-body rod protein [Listeria monocytogenes
           serotype 4b str. F2365]
          Length = 259

 Score = 34.5 bits (77), Expect = 5.6,   Method: Composition-based stats.
 Identities = 14/98 (14%), Positives = 30/98 (30%), Gaps = 1/98 (1%)

Query: 30  ANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGI 89
           AN        G     R    F         V+  +  +  +       P       +G+
Sbjct: 155 ANGDLYNAETGQ-YLGRLGTKFVSANQADSLVKDGEGRLHVNGINTMNLPAGQGIIQNGV 213

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
           ++  NV++ VE   + +  R+  A+   +     +   
Sbjct: 214 IETSNVDLGVEMVQLMDNQRMVQASKNVVNMFDKVYDK 251


>gi|226223313|ref|YP_002757420.1| flagellar hook-basal body protein FlgG [Listeria monocytogenes
           Clip81459]
 gi|225875775|emb|CAS04478.1| Putative flagellar hook-basal body protein FlgG [Listeria
           monocytogenes serotype 4b str. CLIP 80459]
          Length = 259

 Score = 34.5 bits (77), Expect = 5.7,   Method: Composition-based stats.
 Identities = 14/98 (14%), Positives = 30/98 (30%), Gaps = 1/98 (1%)

Query: 30  ANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGI 89
           AN        G     R    F         V+  +  +  +       P       +G+
Sbjct: 155 ANGDLYNAETGQ-YLGRLGTKFVSANQADSLVKDGEGRIHVNGINTMNLPAGQGIIQNGV 213

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
           ++  NV++ VE   + +  R+  A+   +     +   
Sbjct: 214 IETSNVDLGVEMVQLMDNQRMVQASKNVVNMFDKVYDK 251


>gi|197104382|ref|YP_002129759.1| flagellar basal-body rod protein FlgF [Phenylobacterium zucineum
           HLK1]
 gi|196477802|gb|ACG77330.1| flagellar basal-body rod protein FlgF [Phenylobacterium zucineum
           HLK1]
          Length = 245

 Score = 34.5 bits (77), Expect = 5.7,   Method: Composition-based stats.
 Identities = 11/54 (20%), Positives = 22/54 (40%)

Query: 77  FDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             P        G+++  NV  ++E   M E +R Y    + I    D+   +++
Sbjct: 186 PQPAAEARLRQGMLEGSNVQAILEITRMVEVSRAYERTNRMIDSEADLSRRSVE 239


>gi|28952051|ref|NP_240160.2| flagellar basal body rod protein FlgF [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|219681700|ref|YP_002468086.1| flagellar basal-body rod protein FlgF [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
 gi|219682255|ref|YP_002468639.1| flagellar basal-body rod protein FlgF [Buchnera aphidicola str.
           Tuc7 (Acyrthosiphon pisum)]
 gi|257471396|ref|ZP_05635395.1| flagellar basal-body rod protein FlgF [Buchnera aphidicola str.
           LSR1 (Acyrthosiphon pisum)]
 gi|219621988|gb|ACL30144.1| flagellar basal-body rod protein FlgF [Buchnera aphidicola str.
           Tuc7 (Acyrthosiphon pisum)]
 gi|219624543|gb|ACL30698.1| flagellar basal-body rod protein FlgF [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
 gi|311086650|gb|ADP66731.1| flagellar basal body rod protein FlgF [Buchnera aphidicola str.
           TLW03 (Acyrthosiphon pisum)]
 gi|311087236|gb|ADP67316.1| flagellar basal body rod protein FlgF [Buchnera aphidicola str.
           JF99 (Acyrthosiphon pisum)]
 gi|311087755|gb|ADP67834.1| flagellar basal body rod protein FlgF [Buchnera aphidicola str.
           JF98 (Acyrthosiphon pisum)]
          Length = 252

 Score = 34.5 bits (77), Expect = 5.7,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 16/46 (34%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
            SG+++  NVN      +M    R +   ++ I            L
Sbjct: 202 QSGMLEESNVNASKNMIEMISNARQFEMQMKMISMCDQNAEYANQL 247


>gi|256111963|ref|ZP_05452914.1| flagellar basal body rod protein FlgF [Brucella melitensis bv. 3
          str. Ether]
 gi|265993412|ref|ZP_06105969.1| flagellar basal body rod protein FlgF [Brucella melitensis bv. 3
          str. Ether]
 gi|262764282|gb|EEZ10314.1| flagellar basal body rod protein FlgF [Brucella melitensis bv. 3
          str. Ether]
          Length = 243

 Score = 34.5 bits (77), Expect = 5.8,   Method: Composition-based stats.
 Identities = 14/88 (15%), Positives = 25/88 (28%)

Query: 6  ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
           S ++  S L     RM  I+ N+ANA T G       +                     
Sbjct: 4  NSIYVGLSSLITLERRMDAIAHNVANASTVGFRGEGTKFDTIVSDKASDDLSFATAGKSY 63

Query: 66 IGVDQSTFVEEFDPGHPVANASGIVKYP 93
          I  +    ++  +P          + + 
Sbjct: 64 IRTEAGPLIKTDNPLDVAVKGDAWMSFS 91


>gi|255021355|ref|ZP_05293403.1| Flagellar basal-body rod protein flgF [Acidithiobacillus caldus
           ATCC 51756]
 gi|254969218|gb|EET26732.1| Flagellar basal-body rod protein flgF [Acidithiobacillus caldus
           ATCC 51756]
          Length = 246

 Score = 34.5 bits (77), Expect = 5.8,   Method: Composition-based stats.
 Identities = 8/47 (17%), Positives = 18/47 (38%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
            SG ++  NVN +     M + +R +    + ++           +L
Sbjct: 197 ESGALEGSNVNPIHAMVQMLQDSRQFEMQTKLMQTISQDRDAANQIL 243


>gi|229160734|ref|ZP_04288726.1| Flagellar basal-body rod protein flgG [Bacillus cereus R309803]
 gi|228622749|gb|EEK79583.1| Flagellar basal-body rod protein flgG [Bacillus cereus R309803]
          Length = 257

 Score = 34.5 bits (77), Expect = 5.8,   Method: Composition-based stats.
 Identities = 9/64 (14%), Positives = 26/64 (40%), Gaps = 1/64 (1%)

Query: 71  STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT-TL 129
           +       P       + +++  NV++  E AD+  + ++  A+ + +     +      
Sbjct: 194 AEGNIADLPNGTGIVKNHMLENSNVDMTKEMADLMASQKMIQASQRIMTSFDKIYEKEAN 253

Query: 130 DLLR 133
           ++LR
Sbjct: 254 EILR 257


>gi|254437430|ref|ZP_05050924.1| conserved domain protein [Octadecabacter antarcticus 307]
 gi|198252876|gb|EDY77190.1| conserved domain protein [Octadecabacter antarcticus 307]
          Length = 1436

 Score = 34.5 bits (77), Expect = 5.8,   Method: Composition-based stats.
 Identities = 9/33 (27%), Positives = 15/33 (45%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTG 36
          + +   I  S +  Q   + +  +NI NA T G
Sbjct: 1  MASLFEIGRSAINAQRQALNVTGQNIVNANTEG 33


>gi|161620214|ref|YP_001594100.1| flagellar basal body rod protein FlgF [Brucella canis ATCC 23365]
 gi|161337025|gb|ABX63329.1| flagellar basal body rod protein [Brucella canis ATCC 23365]
          Length = 233

 Score = 34.5 bits (77), Expect = 5.8,   Method: Composition-based stats.
 Identities = 14/88 (15%), Positives = 25/88 (28%)

Query: 6  ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
           S ++  S L     RM  I+ N+ANA T G       +                     
Sbjct: 4  NSIYVGLSSLITLERRMDAIAHNVANASTVGFRGEGTKFDTIVSDKASDDVSFATAGKSY 63

Query: 66 IGVDQSTFVEEFDPGHPVANASGIVKYP 93
          I  +    ++  +P          + + 
Sbjct: 64 IRTEAGPLIKTDNPLDVAVKGDAWMSFS 91


>gi|197120202|ref|YP_002140629.1| flagellar basal body rod protein FlgB [Geobacter bemidjiensis Bem]
 gi|197089562|gb|ACH40833.1| flagellar basal body rod protein FlgB [Geobacter bemidjiensis Bem]
          Length = 139

 Score = 34.5 bits (77), Expect = 5.8,   Method: Composition-based stats.
 Identities = 22/112 (19%), Positives = 37/112 (33%), Gaps = 13/112 (11%)

Query: 15  LAVQSARMQIISENIANARTTGDTP-GSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTF 73
           L +++ R  +I+ N+AN  T G TP       R   + ++    +     + I       
Sbjct: 18  LDLRAKRQSVIASNLANVETPGYTPSDLSFEGRLKDALKQGATPTATPHPRHI-----PL 72

Query: 74  VEEFDPGHPVANASGIVKYPN-------VNVLVETADMRETNRLYMANLQTI 118
                    V      V   N       V +  E   M E   +Y A +Q +
Sbjct: 73  KGASVSLDRVQGDLVQVTGSNMGPDGNGVELESEMGRMAENQIMYNATVQLL 124


>gi|37525838|ref|NP_929182.1| flagellar basal body rod protein FlgB [Photorhabdus luminescens
           subsp. laumondii TTO1]
 gi|36785267|emb|CAE14208.1| Flagellar basal-body rod protein FlgB (Putative proximal rod
           protein) [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 137

 Score = 34.5 bits (77), Expect = 5.8,   Method: Composition-based stats.
 Identities = 29/133 (21%), Positives = 49/133 (36%), Gaps = 4/133 (3%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR---RKTISFEEVMHGS 58
           D L A+ H     L+++S R +I+S NIANA T G       +    +KTI+   V    
Sbjct: 3   DKLDAAFHFQQEALSLRSRRQEILSANIANADTPGYQARDIDFATQLKKTIAHGRVTGNG 62

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPN-VNVLVETADMRETNRLYMANLQT 117
            G+ +           +  +               N V++ +E ++  + +  Y A L  
Sbjct: 63  IGLTLTSDRHIPIQPQKRMEMDLLYRVPYQPAMDGNTVDMDMERSNFMDNSLKYQAELTA 122

Query: 118 IKQSHDMMTTTLD 130
                  M   L 
Sbjct: 123 TSSQVKSMMAVLQ 135


>gi|47091645|ref|ZP_00229441.1| flagellar basal-body rod protein, putative [Listeria monocytogenes
           str. 4b H7858]
 gi|254824038|ref|ZP_05229039.1| flagellar basal body rod protein FlgG [Listeria monocytogenes FSL
           J1-194]
 gi|254932038|ref|ZP_05265397.1| flagellar basal body rod protein FlgG [Listeria monocytogenes
           HPB2262]
 gi|47019964|gb|EAL10701.1| flagellar basal-body rod protein, putative [Listeria monocytogenes
           str. 4b H7858]
 gi|293583591|gb|EFF95623.1| flagellar basal body rod protein FlgG [Listeria monocytogenes
           HPB2262]
 gi|293593267|gb|EFG01028.1| flagellar basal body rod protein FlgG [Listeria monocytogenes FSL
           J1-194]
 gi|328467251|gb|EGF38331.1| flagellar basal body rod protein FlgG [Listeria monocytogenes 1816]
 gi|328475645|gb|EGF46394.1| flagellar basal body rod protein FlgG [Listeria monocytogenes 220]
 gi|332311107|gb|EGJ24202.1| Flagellar basal body rod protein [Listeria monocytogenes str. Scott
           A]
          Length = 259

 Score = 34.5 bits (77), Expect = 5.8,   Method: Composition-based stats.
 Identities = 14/98 (14%), Positives = 30/98 (30%), Gaps = 1/98 (1%)

Query: 30  ANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGI 89
           AN        G     R    F         V+  +  +  +       P       +G+
Sbjct: 155 ANGDLYNAETGQ-YLGRLGTKFVSANQADSLVKDGEGRLHVNGINTMNLPAGQGIIQNGV 213

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
           ++  NV++ VE   + +  R+  A+   +     +   
Sbjct: 214 IETSNVDLGVEMVQLMDNQRMVQASKNVVNMFDKVYDK 251


>gi|319944138|ref|ZP_08018416.1| flagellar basal-body rod protein FlgB [Lautropia mirabilis ATCC
           51599]
 gi|319742632|gb|EFV95041.1| flagellar basal-body rod protein FlgB [Lautropia mirabilis ATCC
           51599]
          Length = 154

 Score = 34.1 bits (76), Expect = 5.9,   Method: Composition-based stats.
 Identities = 21/146 (14%), Positives = 39/146 (26%), Gaps = 19/146 (13%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +  +       L ++++R + I+ NIANA T         +         +     G   
Sbjct: 7   MTDALDFHGRALQLRASRQETIASNIANADTPNFKAKDFDFGAALREASGMPASDAGSSA 66

Query: 64  KKIGVDQSTFVEEFDPGHPVANASG------------IVKYPN-------VNVLVETADM 104
                +           H      G             V           V++  E A  
Sbjct: 67  ALPAAEGGLSTVALARTHRGHQQLGGALKSGGKPDLKYVHPEQPSMDGNTVDLNRERAQF 126

Query: 105 RETNRLYMANLQTIKQSHDMMTTTLD 130
            +    Y A+L+ +      M T + 
Sbjct: 127 SQNAVGYEASLRFLNGRIKTMMTAIR 152


>gi|2916790|emb|CAA11956.1| flagellar basal-body rod protein [Sinorhizobium meliloti]
          Length = 229

 Score = 34.1 bits (76), Expect = 5.9,   Method: Composition-based stats.
 Identities = 11/78 (14%), Positives = 22/78 (28%), Gaps = 1/78 (1%)

Query: 54  VMHGSGGVRVKKIGVDQSTFVEEFDPGHPV-ANASGIVKYPNVNVLVETADMRETNRLYM 112
               S G        D      E            G ++  NVN + E + +    R + 
Sbjct: 146 EADFSKGFMRYDNSSDMPAAQPEPVVDRFDVGVMQGFLEESNVNAIQEMSQLIMITRAFD 205

Query: 113 ANLQTIKQSHDMMTTTLD 130
                ++ S   +   ++
Sbjct: 206 NVTALMRDSEGSLDKAIE 223


>gi|171059411|ref|YP_001791760.1| flagellar basal-body rod protein FlgF [Leptothrix cholodnii SP-6]
 gi|170776856|gb|ACB34995.1| flagellar basal-body rod protein FlgF [Leptothrix cholodnii SP-6]
          Length = 241

 Score = 34.1 bits (76), Expect = 6.0,   Method: Composition-based stats.
 Identities = 7/47 (14%), Positives = 18/47 (38%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
             G ++  NV+ +     M    R +   +++++ +         LL
Sbjct: 192 QDGALEGSNVSAIETMVAMISAARQFEQQMKSMQTTEQDEKQAAQLL 238


>gi|146341903|ref|YP_001206951.1| flagellar basal body rod protein FlgF [Bradyrhizobium sp. ORS278]
 gi|146194709|emb|CAL78734.1| putative flagellar basal-body rod protein (flgF or flgG)
           [Bradyrhizobium sp. ORS278]
          Length = 254

 Score = 34.1 bits (76), Expect = 6.0,   Method: Composition-based stats.
 Identities = 9/54 (16%), Positives = 20/54 (37%)

Query: 77  FDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
                      G ++  NV+ + E + M E  R Y      ++   D+  + ++
Sbjct: 194 PQQDTKSTVQQGYIEKSNVSAVGEMSKMVEVMRAYTQVANMLQVQSDLRKSAIE 247


>gi|85058008|ref|YP_453710.1| flagellar basal-body rod protein FlgB [Sodalis glossinidius str.
           'morsitans']
 gi|84778528|dbj|BAE73305.1| flagellar basal-body rod protein FlgB [Sodalis glossinidius str.
           'morsitans']
          Length = 137

 Score = 34.1 bits (76), Expect = 6.0,   Method: Composition-based stats.
 Identities = 23/120 (19%), Positives = 41/120 (34%), Gaps = 5/120 (4%)

Query: 14  GLAVQSARMQIISENIANARTTGDTPGSDPYRRK-TISFEEVMHGSGGVRVKKIGVDQST 72
            L + + R  +++ NIANA T G      P+ R+   + E+    S  + +         
Sbjct: 15  ALNILNRRQDVLAANIANADTPGYQARDIPFTRELRRAIEQGQQRSNNLSLSLTSRQHIP 74

Query: 73  FVEEFDPGHPVA---NASGIVKYPNVNVLVETADMRETNRLYMANLQTIK-QSHDMMTTT 128
                   H +              V++  E  +  +    Y A+L  I  Q   MM+  
Sbjct: 75  AEGVAHADHSLLYRIPDQPSADGNTVDMDRERVNFADNGMKYQASLSFINGQIKSMMSVL 134


>gi|30261742|ref|NP_844119.1| flagellar basal body rod protein FlgB [Bacillus anthracis str.
           Ames]
 gi|47526962|ref|YP_018311.1| flagellar basal body rod protein FlgB [Bacillus anthracis str.
           'Ames Ancestor']
 gi|49184572|ref|YP_027824.1| flagellar basal body rod protein FlgB [Bacillus anthracis str.
           Sterne]
 gi|65319011|ref|ZP_00391970.1| COG1815: Flagellar basal body protein [Bacillus anthracis str.
           A2012]
 gi|165869479|ref|ZP_02214138.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str.
           A0488]
 gi|167633168|ref|ZP_02391493.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str.
           A0442]
 gi|167639175|ref|ZP_02397448.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str.
           A0193]
 gi|170686191|ref|ZP_02877413.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str.
           A0465]
 gi|170706512|ref|ZP_02896972.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str.
           A0389]
 gi|177650628|ref|ZP_02933595.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str.
           A0174]
 gi|190566366|ref|ZP_03019284.1| flagellar basal-body rod protein FlgB [Bacillus anthracis
           Tsiankovskii-I]
 gi|227815499|ref|YP_002815508.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str. CDC
           684]
 gi|229601762|ref|YP_002866142.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str.
           A0248]
 gi|254683232|ref|ZP_05147093.1| flagellar basal body rod protein FlgB [Bacillus anthracis str.
           CNEVA-9066]
 gi|254723820|ref|ZP_05185606.1| flagellar basal body rod protein FlgB [Bacillus anthracis str.
           A1055]
 gi|254734584|ref|ZP_05192296.1| flagellar basal body rod protein FlgB [Bacillus anthracis str.
           Western North America USA6153]
 gi|254740993|ref|ZP_05198681.1| flagellar basal body rod protein FlgB [Bacillus anthracis str.
           Kruger B]
 gi|254755236|ref|ZP_05207270.1| flagellar basal body rod protein FlgB [Bacillus anthracis str.
           Vollum]
 gi|254759772|ref|ZP_05211796.1| flagellar basal body rod protein FlgB [Bacillus anthracis str.
           Australia 94]
 gi|30255970|gb|AAP25605.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str.
           Ames]
 gi|47502110|gb|AAT30786.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str.
           'Ames Ancestor']
 gi|49178499|gb|AAT53875.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str.
           Sterne]
 gi|164714919|gb|EDR20437.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str.
           A0488]
 gi|167512965|gb|EDR88338.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str.
           A0193]
 gi|167531206|gb|EDR93884.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str.
           A0442]
 gi|170128610|gb|EDS97477.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str.
           A0389]
 gi|170669888|gb|EDT20629.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str.
           A0465]
 gi|172083772|gb|EDT68832.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str.
           A0174]
 gi|190562501|gb|EDV16468.1| flagellar basal-body rod protein FlgB [Bacillus anthracis
           Tsiankovskii-I]
 gi|227006070|gb|ACP15813.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str. CDC
           684]
 gi|229266170|gb|ACQ47807.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str.
           A0248]
          Length = 135

 Score = 34.1 bits (76), Expect = 6.0,   Method: Composition-based stats.
 Identities = 17/121 (14%), Positives = 37/121 (30%), Gaps = 7/121 (5%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFV 74
           +     +   +S NIANA T G       +  +      +   +         + Q+  +
Sbjct: 12  MNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQMNKSSALYKNNAADLKSNPDLYQTNEM 71

Query: 75  EEFDPGHPVA-------NASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
                            +        +V+V  E  D+ + N+LY  ++  I   + +   
Sbjct: 72  HVPTVNTKNTYAKIQTKSMQTNKDGNSVDVTTEMLDLMKANQLYGISINAINTQYAINQA 131

Query: 128 T 128
            
Sbjct: 132 A 132


>gi|313610153|gb|EFR85462.1| flagellar basal body rod protein FlgG [Listeria monocytogenes FSL
           F2-208]
          Length = 238

 Score = 34.1 bits (76), Expect = 6.1,   Method: Composition-based stats.
 Identities = 14/98 (14%), Positives = 31/98 (31%), Gaps = 1/98 (1%)

Query: 30  ANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGI 89
           AN     +   S    R    F         V+  +  +  +       P       +G+
Sbjct: 134 ANGDLY-NAETSQYLGRLGTKFVSANQADSLVKDGEGRLHVNGINTMNLPAGQGIIQNGV 192

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
           ++  NV++ VE   + +  R+  A+   +     +   
Sbjct: 193 IETSNVDLGVEMVQLMDNQRMVQASKNVVNMFDKVYDK 230


>gi|218549199|ref|YP_002382990.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia fergusonii ATCC 35469]
 gi|218356740|emb|CAQ89368.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia fergusonii ATCC 35469]
 gi|324113868|gb|EGC07842.1| flagellar basal-body rod protein FlgB [Escherichia fergusonii B253]
 gi|325497619|gb|EGC95478.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia fergusonii ECD227]
          Length = 163

 Score = 34.1 bits (76), Expect = 6.1,   Method: Composition-based stats.
 Identities = 24/132 (18%), Positives = 41/132 (31%), Gaps = 5/132 (3%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTG-DTPGSDPYRRKTISFEEVMHGSGG 60
           D L A+       L +++ R ++++ NIANA T G      D             + + G
Sbjct: 28  DRLDAALRFQQEALNLRAQRQEVLAANIANADTPGYQARDLDFASELKKIMVRGRNEAQG 87

Query: 61  VRVKKIGVDQSTFVEEFDPGHP---VANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           V +               PG            +    V++  E     + +  Y   L  
Sbjct: 88  VSLTLTSTQHIPAQALTAPGAELLYRVPDQPSLDGNTVDMDRERTQFADNSLRYQMGLTV 147

Query: 118 I-KQSHDMMTTT 128
           +  Q   MM   
Sbjct: 148 LGGQIKSMMNVL 159


>gi|119477947|ref|ZP_01618047.1| flagellar hook-associated protein K [marine gamma proteobacterium
          HTCC2143]
 gi|119448860|gb|EAW30102.1| flagellar hook-associated protein K [marine gamma proteobacterium
          HTCC2143]
          Length = 676

 Score = 34.1 bits (76), Expect = 6.1,   Method: Composition-based stats.
 Identities = 13/95 (13%), Positives = 28/95 (29%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
          ++  ++  S L      +Q+   NI+NA     +        +        +   G  V 
Sbjct: 1  MSLLNVGISALTTNQKLLQVTGNNISNAGVESYSRQRAEVSTRPEQLLGGSYQGTGNTVD 60

Query: 65 KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
           I      F+         + +S      N+  + 
Sbjct: 61 NISRVVDQFLITQIQLDTSSRSSLEAFARNMEQVD 95


>gi|297516687|ref|ZP_06935073.1| flagellar hook-associated protein FlgK [Escherichia coli OP50]
          Length = 247

 Score = 34.1 bits (76), Expect = 6.2,   Method: Composition-based stats.
 Identities = 15/110 (13%), Positives = 34/110 (30%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           +    + A SGL    A +   S NI++    G T  +    +   +         GV V
Sbjct: 1   MSNLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGGWVGNGVYV 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
             +  +   F+          ++    +Y  ++ +        ++     
Sbjct: 61  SGVQREYDAFITNQLRAAQTQSSGLTARYEQMSKIDNMLSTSTSSLATQM 110


>gi|317129212|ref|YP_004095494.1| flagellar basal-body rod protein FlgB [Bacillus cellulosilyticus
           DSM 2522]
 gi|315474160|gb|ADU30763.1| flagellar basal-body rod protein FlgB [Bacillus cellulosilyticus
           DSM 2522]
          Length = 134

 Score = 34.1 bits (76), Expect = 6.2,   Method: Composition-based stats.
 Identities = 17/99 (17%), Positives = 31/99 (31%)

Query: 13  SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQST 72
           + L+    R   I++NIAN  T         +  +  S       +      +     S 
Sbjct: 14  TALSASMTRHNTIAQNIANVDTPNYKAKKAVFSHELNSAMNNQRLAANRTDARHIEFSSR 73

Query: 73  FVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
              +        N        NV+V +E A++ +    Y
Sbjct: 74  NSTDEVQVIERNNTQYNHNGNNVDVDLEMAELAKNQIYY 112


>gi|121596118|ref|YP_988014.1| flagellar basal-body rod protein FlgF [Acidovorax sp. JS42]
 gi|222112273|ref|YP_002554537.1| flagellar basal-body rod protein flgf [Acidovorax ebreus TPSY]
 gi|120608198|gb|ABM43938.1| flagellar basal-body rod protein FlgF [Acidovorax sp. JS42]
 gi|221731717|gb|ACM34537.1| flagellar basal-body rod protein FlgF [Acidovorax ebreus TPSY]
          Length = 246

 Score = 34.1 bits (76), Expect = 6.2,   Method: Composition-based stats.
 Identities = 12/106 (11%), Positives = 28/106 (26%), Gaps = 1/106 (0%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTIS-FEEVMHGSGGVR 62
           +    + + +G    + R  +++ N+ANA TTG       +R   +              
Sbjct: 1   MDRIIYTSMTGANAAAHRQAVLANNLANASTTGFRAEMSNFRSVPLQGGGSTTRVFALEA 60

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                           P   +A  +       ++ +          
Sbjct: 61  TSGHVDTPGPAQTTGRPLDAMAVGNAWFAVQGLDGVETYTRAGSFQ 106


>gi|39936949|ref|NP_949225.1| flagellar basal body rod protein FlgB [Rhodopseudomonas palustris
           CGA009]
 gi|39650806|emb|CAE29329.1| possible flagellar basal-body rod protein FlgB [Rhodopseudomonas
           palustris CGA009]
          Length = 168

 Score = 34.1 bits (76), Expect = 6.2,   Method: Composition-based stats.
 Identities = 21/118 (17%), Positives = 39/118 (33%), Gaps = 4/118 (3%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFV 74
           +     R ++++ENI+N+ T    P      + T   +      G + + +      T  
Sbjct: 49  MQWHQERQKVLAENISNSDTPNFRPRDLVEPKFTPEGQAAGGPGGSLPLMRTSASHLTPP 108

Query: 75  EEFDPGHPVANASGIVKYP---NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
               P     N  G    P    VN+  E   +      Y A      +S  ++ T +
Sbjct: 109 G-GSPSFSTNNNGGFQTRPAGNAVNLEDEMLKVSSNQMDYAAVTSLYSRSLGLLKTAI 165


>gi|254853114|ref|ZP_05242462.1| flagellar basal body rod protein FlgG [Listeria monocytogenes FSL
           R2-503]
 gi|300764493|ref|ZP_07074486.1| flagellar basal-body rod protein [Listeria monocytogenes FSL
           N1-017]
 gi|258606464|gb|EEW19072.1| flagellar basal body rod protein FlgG [Listeria monocytogenes FSL
           R2-503]
 gi|300514847|gb|EFK41901.1| flagellar basal-body rod protein [Listeria monocytogenes FSL
           N1-017]
          Length = 259

 Score = 34.1 bits (76), Expect = 6.2,   Method: Composition-based stats.
 Identities = 14/98 (14%), Positives = 30/98 (30%), Gaps = 1/98 (1%)

Query: 30  ANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGI 89
           AN        G     R    F         V+  +  +  +       P       +G+
Sbjct: 155 ANGNLYNAETGQ-YLGRLGTKFVSANQADSLVKDGEGRLHVNGINTMNLPAGQGIIQNGV 213

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
           ++  NV++ VE   + +  R+  A+   +     +   
Sbjct: 214 IETSNVDLGVEMVQLMDNQRMVQASKNVVNMFDKVYDK 251


>gi|121533766|ref|ZP_01665593.1| flagellar basal-body rod protein FlgB [Thermosinus carboxydivorans
           Nor1]
 gi|121307757|gb|EAX48672.1| flagellar basal-body rod protein FlgB [Thermosinus carboxydivorans
           Nor1]
          Length = 164

 Score = 34.1 bits (76), Expect = 6.3,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 41/113 (36%), Gaps = 3/113 (2%)

Query: 21  RMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPG 80
           R ++IS NIAN  T G       +  +         G      + I      F  E    
Sbjct: 54  RHKVISNNIANVNTPGFKRSEVHFEEQLKQALNAKSGLSRTHQRHIAAKGDDFSVEVITV 113

Query: 81  HPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  A  +      NV++  E A+M + N  Y A  Q + +    + + ++  R
Sbjct: 114 NNTAYRA---DGNNVDIDFEMAEMAKNNIYYDAVAQQLNRYFSNLKSVINEGR 163


>gi|319764540|ref|YP_004128477.1| flagellar basal-body rod protein flgf [Alicycliphilus denitrificans
           BC]
 gi|317119101|gb|ADV01590.1| flagellar basal-body rod protein FlgF [Alicycliphilus denitrificans
           BC]
          Length = 246

 Score = 34.1 bits (76), Expect = 6.3,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 18/43 (41%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           ++  NVN +     M    R +   ++ ++ + +   T   LL
Sbjct: 200 LEGSNVNPVESMVGMIAAARQFEQQMRLLQTAENDDKTASQLL 242


>gi|326791546|ref|YP_004309367.1| flagellar basal-body rod protein FlgB [Clostridium lentocellum DSM
           5427]
 gi|326542310|gb|ADZ84169.1| flagellar basal-body rod protein FlgB [Clostridium lentocellum DSM
           5427]
          Length = 122

 Score = 34.1 bits (76), Expect = 6.4,   Method: Composition-based stats.
 Identities = 25/132 (18%), Positives = 47/132 (35%), Gaps = 10/132 (7%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             + +   + N+ ++    R  IISENI+N  T G        R+       +       
Sbjct: 1   MNIFSDIDLMNTAISATMLRKGIISENISNVDTPG------YKRKDVRFETILEKEIKKG 54

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
               + +               AN+S  +   NV++ VE A+  + +  Y A +  +   
Sbjct: 55  GTAGLNLKDIEPEI----YTDYANSSYRLDGNNVDIDVEMAEEAKVSARYNALVTRVNSQ 110

Query: 122 HDMMTTTLDLLR 133
               +T L  L+
Sbjct: 111 LGRFSTVLQNLK 122


>gi|285018212|ref|YP_003375923.1| flagellar basal body protein [Xanthomonas albilineans GPE PC73]
 gi|283473430|emb|CBA15935.1| probable flagellar basal body protein [Xanthomonas albilineans]
          Length = 132

 Score = 34.1 bits (76), Expect = 6.4,   Method: Composition-based stats.
 Identities = 21/134 (15%), Positives = 43/134 (32%), Gaps = 11/134 (8%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTP-----GSDPYRRKTISFEEVMH 56
           + + +   +    L ++  RM++I+ NI+N  T G         +     +       + 
Sbjct: 3   NPISSYFGVHGDALPLREQRMKLIASNISNVDTPGYKAQDLDFDAAMRAAQGQREGTQLE 62

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQ 116
            +    +   G   + F    +   P  + +       V+   E A        Y A+L 
Sbjct: 63  VTDSRHIAVGGDGLNPFQITRESSQPNLDGNT------VDPDAERAAYGRAALEYRASLS 116

Query: 117 TIKQSHDMMTTTLD 130
            I      M T + 
Sbjct: 117 FIDSKVRTMLTAIT 130


>gi|71278001|ref|YP_268219.1| flagellar basal-body rod protein FlgB [Colwellia psychrerythraea
           34H]
 gi|71143741|gb|AAZ24214.1| flagellar basal-body rod protein FlgB [Colwellia psychrerythraea
           34H]
          Length = 132

 Score = 34.1 bits (76), Expect = 6.4,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 40/114 (35%), Gaps = 2/114 (1%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
               +   G+ ++S R ++I+ NIANA T G       + +                  K
Sbjct: 7   KGFQLHTQGMLIRSQRAEVIASNIANADTPGYKAKGLDFNQALAQAANKQKMGMSRTNDK 66

Query: 66  IGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
               ++      D   P    +G      V+V VE     + +  Y A++Q + 
Sbjct: 67  HFDIRTELNNSVDYRVPNNPDTG--DGNTVDVQVERNLYLKNSMEYQASIQFLN 118


>gi|205375049|ref|ZP_03227840.1| flagellar hook-associated protein FlgK [Bacillus coahuilensis m4-4]
          Length = 511

 Score = 34.1 bits (76), Expect = 6.4,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 20/42 (47%), Gaps = 1/42 (2%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD-LLR 133
             V++  E  +M +    Y A  + I  + +++ T ++ + R
Sbjct: 467 SQVSLDEEMTNMVQYQHAYNAAARMISLTDELLDTIINGMGR 508


>gi|297617135|ref|YP_003702294.1| flagellar basal-body rod protein FlgB [Syntrophothermus lipocalidus
           DSM 12680]
 gi|297144972|gb|ADI01729.1| flagellar basal-body rod protein FlgB [Syntrophothermus lipocalidus
           DSM 12680]
          Length = 138

 Score = 34.1 bits (76), Expect = 6.5,   Method: Composition-based stats.
 Identities = 20/127 (15%), Positives = 43/127 (33%), Gaps = 1/127 (0%)

Query: 8   AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
            ++    L     R ++I+ N+AN  T G       +  +  +  +       ++     
Sbjct: 11  INVLEKALDGAMLRQKVIANNLANVDTPGYKAMEVTFEEQLKNSMKEAGSEYNLKTTHPR 70

Query: 68  VDQSTFVEEFDPGHPVANASGIVKYPN-VNVLVETADMRETNRLYMANLQTIKQSHDMMT 126
             Q   +  F  G  VA         N V++  E A + +    Y A   ++ +   ++ 
Sbjct: 71  HLQIPNISSFQVGINVAEGYTFRNDGNSVDIDREMARLSKNVVYYNAVSTSMSEEFKLLR 130

Query: 127 TTLDLLR 133
             +   R
Sbjct: 131 MAITEGR 137


>gi|261339382|ref|ZP_05967240.1| flagellar hook-associated protein FlgK [Enterobacter cancerogenus
          ATCC 35316]
 gi|288318183|gb|EFC57121.1| flagellar hook-associated protein FlgK [Enterobacter cancerogenus
          ATCC 35316]
          Length = 547

 Score = 34.1 bits (76), Expect = 6.5,   Method: Composition-based stats.
 Identities = 15/96 (15%), Positives = 35/96 (36%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          + +  + A SGL+   A +  +S NI++    G T  +        +         GV V
Sbjct: 1  MSSLINSAMSGLSAAQAALNTVSNNISSYNVAGYTRQTTILGASNSTLTGGGWVGNGVYV 60

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLV 99
            +  +  +F+          ++    +Y  ++ + 
Sbjct: 61 SGVQREYDSFITNQLRAAQNQSSGLTTRYQQMSKID 96



 Score = 34.1 bits (76), Expect = 7.5,   Method: Composition-based stats.
 Identities = 13/102 (12%), Positives = 36/102 (35%), Gaps = 2/102 (1%)

Query: 32  ARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVK 91
           +         D    K +   +  + +    V  +G   ++          VA      +
Sbjct: 445 SDNRNGKALVDLQNSKVVGGNKTFNDAYAALVSTVGSTTASLKTSSQTKANVATQLSNQQ 504

Query: 92  YP--NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
                VN+  E  +++   + Y+AN Q ++ ++ +    +++
Sbjct: 505 QSISGVNLDEEYGNLQRYQQYYLANAQVLQTANTLFDALINI 546


>gi|196039148|ref|ZP_03106455.1| flagellar basal-body rod protein FlgB [Bacillus cereus NVH0597-99]
 gi|196030293|gb|EDX68893.1| flagellar basal-body rod protein FlgB [Bacillus cereus NVH0597-99]
          Length = 135

 Score = 34.1 bits (76), Expect = 6.5,   Method: Composition-based stats.
 Identities = 18/121 (14%), Positives = 38/121 (31%), Gaps = 7/121 (5%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFV 74
           +     +   +S NIANA T G       +  +      +   +        G+ Q+  +
Sbjct: 12  MNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQMNKSSALYKNNAADLKSNPGLYQTNEM 71

Query: 75  EEFDPGHPVA-------NASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
                            +        +V+V  E  D+ + N+LY  ++  I   + +   
Sbjct: 72  HLPTVNTKNTYAKIQTKSMQTNKDGNSVDVTTEMLDLMKANQLYGISINAINTQYAINQA 131

Query: 128 T 128
            
Sbjct: 132 A 132


>gi|224437871|ref|ZP_03658818.1| flagellar basal body rod protein FlgB [Helicobacter cinaedi CCUG
           18818]
 gi|313144320|ref|ZP_07806513.1| flagellar basal body rod protein FlgB [Helicobacter cinaedi CCUG
           18818]
 gi|313129351|gb|EFR46968.1| flagellar basal body rod protein FlgB [Helicobacter cinaedi CCUG
           18818]
          Length = 144

 Score = 34.1 bits (76), Expect = 6.6,   Method: Composition-based stats.
 Identities = 23/141 (16%), Positives = 50/141 (35%), Gaps = 7/141 (4%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGS----DPYRRKTISFEEVMH 56
           +  +  +  +    L  +S R  +I+ NIAN  T    P          R+         
Sbjct: 3   IADISKAYSVVYKALDYRSIRQDMIASNIANVDTPFYRPKDVNFEQYLARENKRIFGTGE 62

Query: 57  GSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPN---VNVLVETADMRETNRLYMA 113
            S  + + K                 +    G +   +   V++ VET++M + + +Y A
Sbjct: 63  RSYKLDIAKTAKGHLDSRRNVKDSATMFWRDGHLAKNDGNSVDLDVETSEMGKNSTMYQA 122

Query: 114 NLQTIKQSHDMMTTTLDLLRD 134
               +++   + +  +D  R+
Sbjct: 123 LTSALRRHKGIFSYAMDSGRN 143


>gi|114765224|ref|ZP_01444356.1| Flagellar basal-body rod protein FlgB [Pelagibaca bermudensis
           HTCC2601]
 gi|114542359|gb|EAU45387.1| Flagellar basal-body rod protein FlgB [Roseovarius sp. HTCC2601]
          Length = 133

 Score = 34.1 bits (76), Expect = 6.6,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 43/126 (34%), Gaps = 1/126 (0%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           ++   +A+  +    AR  +ISEN+ANA T              +   + M G      +
Sbjct: 6   MSFFQLASQRMTWLGARQAVISENVANADTPDYKAKKVSGFDAMLENADAMQGLKVTDTR 65

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
            I     T           A   G +    V +  +T D  E    Y    +  ++ H +
Sbjct: 66  HITSSGETPNGVRVTADEDA-WEGSIDGNTVALEQQTIDAAEVAGSYRLAAELYRRGHSL 124

Query: 125 MTTTLD 130
           +T  + 
Sbjct: 125 LTIAVT 130


>gi|228964726|ref|ZP_04125833.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar
           sotto str. T04001]
 gi|228794976|gb|EEM42475.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar
           sotto str. T04001]
          Length = 152

 Score = 34.1 bits (76), Expect = 6.6,   Method: Composition-based stats.
 Identities = 18/121 (14%), Positives = 38/121 (31%), Gaps = 7/121 (5%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFV 74
           +     +   +S NIANA T G       +  +      +   +         + Q+  +
Sbjct: 29  MNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQMNKSSALYKNNAADLKSNPDLYQTNEM 88

Query: 75  EEFDPGHPVA-------NASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
                            +        +V+V  E  D+ +TN+LY  ++  I   + +   
Sbjct: 89  HLPTVNTKNTYAKIQTKSMQTNKDGNSVDVTTEMLDLMKTNQLYGISVNAINTQYAINQA 148

Query: 128 T 128
            
Sbjct: 149 A 149


>gi|86356309|ref|YP_468201.1| flagellar basal body rod protein FlgB [Rhizobium etli CFN 42]
 gi|86280411|gb|ABC89474.1| flagellar basal-body rod protein [Rhizobium etli CFN 42]
          Length = 130

 Score = 34.1 bits (76), Expect = 6.6,   Method: Composition-based stats.
 Identities = 19/113 (16%), Positives = 34/113 (30%), Gaps = 2/113 (1%)

Query: 19  SARMQIISENIANARTTG-DTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEF 77
           + R Q+++ NIANA T         P+       +  M  +            S  ++  
Sbjct: 18  TIRQQVVAGNIANANTPKFRAKDVTPFDAVLDRSDITMARTNPAHFSGNDFSDSGDIDV- 76

Query: 78  DPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
                            V +  E +   +  R Y  N   +   + MM  T+ 
Sbjct: 77  KEAALDQEIGIQESGNTVGLAEELSKSGDIKRQYDLNTSLVSSFNRMMLMTVR 129


>gi|324113877|gb|EGC07851.1| flagellar hook protein FlgK [Escherichia fergusonii B253]
          Length = 548

 Score = 34.1 bits (76), Expect = 6.7,   Method: Composition-based stats.
 Identities = 15/99 (15%), Positives = 34/99 (34%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           + +  + A SGL+   A +   S NI++    G T  +    +   +         GV V
Sbjct: 1   MSSLINNAMSGLSAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGGWVGNGVYV 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETA 102
             +  +   F+          ++    +Y  ++ +    
Sbjct: 61  SGVQREYDAFITNQLRAAQTQSSGLTTRYEQMSKIDNLL 99


>gi|313200562|ref|YP_004039220.1| flagellar basal-body rod protein flgf [Methylovorus sp. MP688]
 gi|312439878|gb|ADQ83984.1| flagellar basal-body rod protein FlgF [Methylovorus sp. MP688]
          Length = 246

 Score = 34.1 bits (76), Expect = 6.7,   Method: Composition-based stats.
 Identities = 7/42 (16%), Positives = 18/42 (42%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           ++  NVNV+    +M    R +   ++ ++ + +       L
Sbjct: 201 LEGSNVNVVDAMVNMISLARQFETQMKLLENAENNANKASQL 242


>gi|124268253|ref|YP_001022257.1| flagellar basal body and hook protein [Methylibium petroleiphilum
           PM1]
 gi|124261028|gb|ABM96022.1| flagellar basal body and hook protein [Methylibium petroleiphilum
           PM1]
          Length = 242

 Score = 34.1 bits (76), Expect = 6.8,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 17/43 (39%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           ++  NVN +     M    R + + ++ ++ +         LL
Sbjct: 196 LEGSNVNPIENMVAMIAAARQFESQMKMLQTAEGDEKAASQLL 238


>gi|85710170|ref|ZP_01041235.1| flagellar hook-associated protein 1 [Erythrobacter sp. NAP1]
 gi|85688880|gb|EAQ28884.1| flagellar hook-associated protein 1 [Erythrobacter sp. NAP1]
          Length = 452

 Score = 34.1 bits (76), Expect = 6.9,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 20/42 (47%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +    V++  E A +    + + AN + I+ + ++  T L L
Sbjct: 410 LSETGVDLDAEAASLIRLQQAFEANSRVIQVASELFDTILGL 451


>gi|121601960|ref|YP_989403.1| flagellar basal body rod protein FlgB [Bartonella bacilliformis
           KC583]
 gi|120614137|gb|ABM44738.1| flagellar basal-body rod protein FlgB [Bartonella bacilliformis
           KC583]
          Length = 128

 Score = 34.1 bits (76), Expect = 6.9,   Method: Composition-based stats.
 Identities = 25/130 (19%), Positives = 40/130 (30%), Gaps = 5/130 (3%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD  +    +A+      S R + ++ N+ANA     TPG      +  +          
Sbjct: 1   MDP-VNLFDLASKQAEWLSVRQKAVASNVANAN----TPGYQARDVQNFTDIVQNKAISM 55

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
                  +D +    E     P           NVN+  E +      R    N   +K 
Sbjct: 56  KVTHVQHMDLTENGMEAQVIRPDNAGGVTHSGNNVNLEEEMSKGAAIGREMSLNTAIVKA 115

Query: 121 SHDMMTTTLD 130
            H M   T+ 
Sbjct: 116 FHRMTMLTVR 125


>gi|289670506|ref|ZP_06491581.1| flagellar hook protein FlgE [Xanthomonas campestris pv.
          musacearum NCPPB4381]
          Length = 142

 Score = 34.1 bits (76), Expect = 7.0,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 18/39 (46%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
            + + SG+   +A + + S NIAN  TTG       + 
Sbjct: 2  GFNTSLSGINAANADLNVTSNNIANVNTTGFKESRAEFA 40


>gi|253688975|ref|YP_003018165.1| flagellar basal-body rod protein FlgB [Pectobacterium carotovorum
           subsp. carotovorum PC1]
 gi|251755553|gb|ACT13629.1| flagellar basal-body rod protein FlgB [Pectobacterium carotovorum
           subsp. carotovorum PC1]
          Length = 138

 Score = 34.1 bits (76), Expect = 7.0,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 47/132 (35%), Gaps = 5/132 (3%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-G 60
           D L AS       L +++ R +I++ NIANA T G       +  +     E    +G G
Sbjct: 3   DKLDASLRFQQEALNLRAQRQEILAANIANADTPGYQARDIDFASQLSKTMEQGRVNGTG 62

Query: 61  VRVKKIGVDQSTFVEEFDPGHP---VANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           + +K   V          P             +    V++  E  +  + +  Y  +L  
Sbjct: 63  IALKTTSVRHIPAQNFQPPELDLLYRVPDQPALDGNTVDMDRERTNFADNSLKYQTSLTV 122

Query: 118 I-KQSHDMMTTT 128
           +  Q   MM+  
Sbjct: 123 LGGQIKGMMSVL 134


>gi|218549190|ref|YP_002382981.1| flagellar hook-associated protein FlgK [Escherichia fergusonii ATCC
           35469]
 gi|218356731|emb|CAQ89359.1| flagellar hook-filament junction protein 1 [Escherichia fergusonii
           ATCC 35469]
          Length = 548

 Score = 34.1 bits (76), Expect = 7.0,   Method: Composition-based stats.
 Identities = 15/99 (15%), Positives = 34/99 (34%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           + +  + A SGL+   A +   S NI++    G T  +    +   +         GV V
Sbjct: 1   MSSLINNAMSGLSAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGGWVGNGVYV 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETA 102
             +  +   F+          ++    +Y  ++ +    
Sbjct: 61  SGVQREYDAFITNQLRAAQTQSSGLTTRYEQMSKIDNLL 99


>gi|117928046|ref|YP_872597.1| flagellar basal-body rod protein [Acidothermus cellulolyticus 11B]
 gi|117648509|gb|ABK52611.1| flagellar basal-body rod protein [Acidothermus cellulolyticus 11B]
          Length = 125

 Score = 34.1 bits (76), Expect = 7.0,   Method: Composition-based stats.
 Identities = 21/125 (16%), Positives = 46/125 (36%), Gaps = 20/125 (16%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
             +  ++ +GL+    R + +++N+AN  T         +        +    SG     
Sbjct: 18  TQALEVSIAGLSA---RQRALADNVANIDTPNFLAKRVVF----EDSLKAAIASGDPGAA 70

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
           +I    S      +P +   N        NVN+  ET    +T   Y  +++ +   + +
Sbjct: 71  QITTLTS-----LEPTNTNGN--------NVNLDEETVSAIDTGLKYQTDIEALTAKYQL 117

Query: 125 MTTTL 129
           + T +
Sbjct: 118 LKTAI 122


>gi|258514000|ref|YP_003190222.1| flagellar basal-body rod protein FlgB [Desulfotomaculum acetoxidans
           DSM 771]
 gi|257777705|gb|ACV61599.1| flagellar basal-body rod protein FlgB [Desulfotomaculum acetoxidans
           DSM 771]
          Length = 134

 Score = 34.1 bits (76), Expect = 7.1,   Method: Composition-based stats.
 Identities = 21/121 (17%), Positives = 34/121 (28%), Gaps = 1/121 (0%)

Query: 1   MDYLIA-SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG 59
           MD     S  +    +   S R ++I+ NIAN  T G    S  +               
Sbjct: 1   MDLFNNKSLRLLEKAIDAGSLRQRVIANNIANINTPGFKKSSVAFESILKKNLNTGRIPL 60

Query: 60  GVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
                +      +              S      NV+V  E   +      Y A++Q + 
Sbjct: 61  KYSDSRHFGAADSLDAINPTVVKENTTSMRSDGNNVDVEQEMVRLVLNTINYNADIQELN 120

Query: 120 Q 120
            
Sbjct: 121 N 121


>gi|315281336|ref|ZP_07869982.1| flagellar basal body rod protein FlgG [Listeria marthii FSL S4-120]
 gi|313615012|gb|EFR88510.1| flagellar basal body rod protein FlgG [Listeria marthii FSL S4-120]
          Length = 152

 Score = 34.1 bits (76), Expect = 7.2,   Method: Composition-based stats.
 Identities = 13/98 (13%), Positives = 31/98 (31%), Gaps = 1/98 (1%)

Query: 30  ANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGI 89
           AN     +   +    R    F         V+  +  +  +       P       +G+
Sbjct: 48  ANGDLY-NAETNQYLGRLGTKFVSANQADSLVKDGEGRLHVNGVNTMNLPAGQGIIQNGV 106

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
           ++  NV++ VE   + +  R+  A+   +     +   
Sbjct: 107 IETSNVDLGVEMVQLMDNQRMVQASKNVVNMFDKVYDK 144


>gi|253998487|ref|YP_003050550.1| flagellar basal-body rod protein FlgF [Methylovorus sp. SIP3-4]
 gi|253985166|gb|ACT50023.1| flagellar basal-body rod protein FlgF [Methylovorus sp. SIP3-4]
          Length = 246

 Score = 34.1 bits (76), Expect = 7.2,   Method: Composition-based stats.
 Identities = 7/42 (16%), Positives = 18/42 (42%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           ++  NVNV+    +M    R +   ++ ++ + +       L
Sbjct: 201 LEGSNVNVVDAMVNMISLARQFETQMKLLENAENNANKASQL 242


>gi|257866375|ref|ZP_05646028.1| flagellar basal-body rod protein FlgB [Enterococcus casseliflavus
           EC30]
 gi|257873109|ref|ZP_05652762.1| flagellar basal-body rod protein FlgB [Enterococcus casseliflavus
           EC10]
 gi|257875988|ref|ZP_05655641.1| flagellar basal-body rod protein FlgB [Enterococcus casseliflavus
           EC20]
 gi|257800333|gb|EEV29361.1| flagellar basal-body rod protein FlgB [Enterococcus casseliflavus
           EC30]
 gi|257807273|gb|EEV36095.1| flagellar basal-body rod protein FlgB [Enterococcus casseliflavus
           EC10]
 gi|257810154|gb|EEV38974.1| flagellar basal-body rod protein FlgB [Enterococcus casseliflavus
           EC20]
          Length = 120

 Score = 34.1 bits (76), Expect = 7.2,   Method: Composition-based stats.
 Identities = 24/127 (18%), Positives = 44/127 (34%), Gaps = 8/127 (6%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           ++ +  +  + + V + R ++IS NIAN  T G       +       ++ +  SG    
Sbjct: 1   MLDTYDLLKTAMNVSAQRAELISSNIANVNTDGYKAKRIVF---ESELKQALASSGTDAA 57

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHD 123
            +  V Q       +    + +        NV++ VE  D       Y A    +     
Sbjct: 58  TEASVSQVKPKITENATTSIKDNGN-----NVDLEVEMLDQAANGLYYSALTAQVNGRLQ 112

Query: 124 MMTTTLD 130
           MM   L 
Sbjct: 113 MMNLVLS 119


>gi|229121295|ref|ZP_04250526.1| Flagellar basal-body rod protein [Bacillus cereus 95/8201]
 gi|228662140|gb|EEL17749.1| Flagellar basal-body rod protein [Bacillus cereus 95/8201]
          Length = 135

 Score = 34.1 bits (76), Expect = 7.2,   Method: Composition-based stats.
 Identities = 17/121 (14%), Positives = 37/121 (30%), Gaps = 7/121 (5%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFV 74
           +     +   +S NIANA T G       +  +      +   +         + Q+  +
Sbjct: 12  MNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQINKSSALYKNNAADLKGNPDLYQTNEM 71

Query: 75  EEFDPGHPVA-------NASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
                            +        +V+V  E  D+ + N+LY  ++  I   + +   
Sbjct: 72  HLPTVNTKNTYAKIQTKSMQTNKDGNSVDVTTEMLDLMKANQLYGISINAINTQYAINQA 131

Query: 128 T 128
            
Sbjct: 132 A 132


>gi|251799725|ref|YP_003014456.1| flagellar hook-associated protein FlgK [Paenibacillus sp. JDR-2]
 gi|247547351|gb|ACT04370.1| flagellar hook-associated protein FlgK [Paenibacillus sp. JDR-2]
          Length = 518

 Score = 34.1 bits (76), Expect = 7.2,   Method: Composition-based stats.
 Identities = 13/113 (11%), Positives = 38/113 (33%), Gaps = 5/113 (4%)

Query: 24  IISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPV 83
           +++ N  N+     +   D       +    + G     V ++GV              +
Sbjct: 405 VVAGN--NSMAVLMSQARDTKFAFDATDNNTISGFFRAVVGQLGVQSKEMQRLQTNQQTI 462

Query: 84  ANASGIVKYP--NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD-LLR 133
            +     +     V++  E +D+ +    Y A+ + +    + +   ++ + R
Sbjct: 463 VDQVDSRRMSVSGVSLDEEMSDLVKFQHAYNASARVMTVIDETLDRIINSMGR 515


>gi|37679153|ref|NP_933762.1| flagellar hook-associated protein FlgK [Vibrio vulnificus YJ016]
 gi|320157103|ref|YP_004189482.1| flagellar hook-associated protein FlgK [Vibrio vulnificus MO6-24/O]
 gi|37197895|dbj|BAC93733.1| flagellar hook-associated protein FlgK [Vibrio vulnificus YJ016]
 gi|319932415|gb|ADV87279.1| flagellar hook-associated protein FlgK [Vibrio vulnificus MO6-24/O]
          Length = 638

 Score = 34.1 bits (76), Expect = 7.2,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 21/39 (53%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN+  E A+M    + YMA+ + ++ ++D   T L L
Sbjct: 599 SGVNLDEEAANMMRFQQAYMASSRIMQAANDTFNTILQL 637


>gi|330893070|gb|EGH25731.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv.
          mori str. 301020]
          Length = 202

 Score = 34.1 bits (76), Expect = 7.3,   Method: Composition-based stats.
 Identities = 12/33 (36%), Positives = 17/33 (51%)

Query: 13 SGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          +GLA Q   +  IS N+AN  TTG       ++
Sbjct: 22 TGLAAQDTNLTTISNNLANVSTTGFKSDRAEFQ 54


>gi|227820852|ref|YP_002824822.1| flagellar basal body rod protein FlgF [Sinorhizobium fredii NGR234]
 gi|227339851|gb|ACP24069.1| Flagellar basal-body rod protein FlgF [Sinorhizobium fredii NGR234]
          Length = 241

 Score = 34.1 bits (76), Expect = 7.3,   Method: Composition-based stats.
 Identities = 11/69 (15%), Positives = 22/69 (31%), Gaps = 5/69 (7%)

Query: 66  IGVDQSTFVEEFDPGH-----PVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQ 120
           +  D S  +    P        V    G ++  NVN + E   +    R +      ++ 
Sbjct: 166 VRYDNSAVMPAAQPEPVVDRFDVGVMQGFLEESNVNAVQEMTQLIMVTRAFDNVTALMRD 225

Query: 121 SHDMMTTTL 129
           S   +   +
Sbjct: 226 SEGSLEEAI 234


>gi|253681456|ref|ZP_04862253.1| flagellar basal-body rod protein FlgB [Clostridium botulinum D str.
           1873]
 gi|253561168|gb|EES90620.1| flagellar basal-body rod protein FlgB [Clostridium botulinum D str.
           1873]
          Length = 134

 Score = 34.1 bits (76), Expect = 7.3,   Method: Composition-based stats.
 Identities = 29/136 (21%), Positives = 55/136 (40%), Gaps = 10/136 (7%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           M     +  +    L   + R  +I+ NIAN  T G       Y+R  ++FE+ +  S  
Sbjct: 6   MSESQKNYDLIKQSLKATAKRKNVINNNIANFNTKG-------YKRSYVTFEDSLKESKD 58

Query: 61  VRVKKIGVDQ-STFVEEFDPGHPVANASGIVKY--PNVNVLVETADMRETNRLYMANLQT 117
               KI  D+   + ++F   +   + S  +K    NV+V  E  ++      Y A + T
Sbjct: 59  KLDLKITNDKHIAYKKKFGEINVKKDESDSMKMDGNNVDVDNEMTNLAANTLEYNALITT 118

Query: 118 IKQSHDMMTTTLDLLR 133
           +  +  +    ++  R
Sbjct: 119 LNSTLSLKRYIINGGR 134


>gi|229166584|ref|ZP_04294336.1| Flagellar basal-body rod protein [Bacillus cereus AH621]
 gi|228616838|gb|EEK73911.1| Flagellar basal-body rod protein [Bacillus cereus AH621]
          Length = 161

 Score = 34.1 bits (76), Expect = 7.3,   Method: Composition-based stats.
 Identities = 18/121 (14%), Positives = 38/121 (31%), Gaps = 7/121 (5%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFV 74
           +     +   +S NIANA T G       +  +      +   +         + Q+  +
Sbjct: 38  MNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQMNMSSALYKKNAADLKSNPDLYQTNVM 97

Query: 75  EEFDPGHPVA-------NASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
                            +        +V+V  E  D+ +TN+LY  ++  I   + +   
Sbjct: 98  HLPTANTKNTYAKIQTKSMQTNKDGNSVDVTTEMLDLMKTNQLYGVSINAINTQYAINQA 157

Query: 128 T 128
            
Sbjct: 158 A 158


>gi|188527163|ref|YP_001909850.1| flagellar basal-body rod protein (flgG) [Helicobacter pylori
          Shi470]
 gi|188143403|gb|ACD47820.1| flagellar basal-body rod protein (flgG) [Helicobacter pylori
          Shi470]
          Length = 269

 Score = 34.1 bits (76), Expect = 7.3,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 16/39 (41%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSD 42
          +    + A   +A Q  R+ + S N+AN  T G      
Sbjct: 1  MQNGYYAATGAMAAQFNRLDLTSNNLANLNTNGFKRDDA 39


>gi|167648226|ref|YP_001685889.1| hypothetical protein Caul_4270 [Caulobacter sp. K31]
 gi|167350656|gb|ABZ73391.1| protein of unknown function DUF1078 domain protein [Caulobacter sp.
           K31]
          Length = 77

 Score = 34.1 bits (76), Expect = 7.3,   Method: Composition-based stats.
 Identities = 7/37 (18%), Positives = 15/37 (40%)

Query: 95  VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +++  E  +       + AN    K + +M    LD+
Sbjct: 39  IDLAHEAVEQISAKTDFKANAAVAKTADEMTGALLDI 75


>gi|120613066|ref|YP_972744.1| flagellar hook-associated protein FlgK [Acidovorax citrulli
           AAC00-1]
 gi|120591530|gb|ABM34970.1| flagellar hook-associated protein FlgK [Acidovorax citrulli
           AAC00-1]
          Length = 642

 Score = 34.1 bits (76), Expect = 7.3,   Method: Composition-based stats.
 Identities = 16/100 (16%), Positives = 32/100 (32%), Gaps = 6/100 (6%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           ++  ++    L      +Q    NIAN  T G +      R+           +GG  + 
Sbjct: 1   MSLLNVGARALLANQVALQTTGHNIANVNTAGYS------RQTLSLQTVQGQFTGGGYIG 54

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
           +    Q+      +     A A+  V+  +       + M
Sbjct: 55  QGVDVQTILRNHNELLTRQAAAADSVQASDKTRAERLSQM 94


>gi|325497610|gb|EGC95469.1| flagellar hook-associated protein FlgK [Escherichia fergusonii
           ECD227]
          Length = 548

 Score = 34.1 bits (76), Expect = 7.4,   Method: Composition-based stats.
 Identities = 15/99 (15%), Positives = 34/99 (34%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           + +  + A SGL+   A +   S NI++    G T  +    +   +         GV V
Sbjct: 1   MSSLINNAMSGLSAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGGWVGNGVYV 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETA 102
             +  +   F+          ++    +Y  ++ +    
Sbjct: 61  SGVQREYDAFITNQLRAAQTQSSGLTTRYEQMSKIDNLL 99


>gi|302670715|ref|YP_003830675.1| flagellar basal-body rod protein FlgB [Butyrivibrio proteoclasticus
           B316]
 gi|302395188|gb|ADL34093.1| flagellar basal-body rod protein FlgB [Butyrivibrio proteoclasticus
           B316]
          Length = 131

 Score = 34.1 bits (76), Expect = 7.5,   Method: Composition-based stats.
 Identities = 17/111 (15%), Positives = 32/111 (28%), Gaps = 3/111 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
                  ++ +        R ++I+ NIAN  T G       +       E  +  S  V
Sbjct: 4   SNAFDYINVLDKAADASWLRNEVIANNIANVDTPGYKRQDLNF---EDELERALGNSRYV 60

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYM 112
            +                 +  +N S  +   NV++  E   +      Y 
Sbjct: 61  TMDAKVAGLKERELRPRVINDYSNFSYRLDKNNVDIDTENVTLAANQIKYQ 111


>gi|229166627|ref|ZP_04294379.1| Flagellar basal-body rod protein flgG [Bacillus cereus AH621]
 gi|228616881|gb|EEK73954.1| Flagellar basal-body rod protein flgG [Bacillus cereus AH621]
          Length = 259

 Score = 34.1 bits (76), Expect = 7.5,   Method: Composition-based stats.
 Identities = 9/64 (14%), Positives = 25/64 (39%), Gaps = 1/64 (1%)

Query: 71  STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT-TL 129
           +       P       + +++  NV++  E AD+    ++  A+ + +     +      
Sbjct: 196 AEGNIADLPNGTGIVKNHMLENSNVDMTKEMADLMTNQKMIQASQRIMTSFDKIYEKEAN 255

Query: 130 DLLR 133
           ++LR
Sbjct: 256 EILR 259


>gi|27363699|ref|NP_759227.1| flagellar hook-associated protein FlgK [Vibrio vulnificus CMCP6]
 gi|27359815|gb|AAO08754.1| flagellar hook-associated protein FlgK [Vibrio vulnificus CMCP6]
          Length = 638

 Score = 34.1 bits (76), Expect = 7.5,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 21/39 (53%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             VN+  E A+M    + YMA+ + ++ ++D   T L L
Sbjct: 599 SGVNLDEEAANMMRFQQAYMASSRIMQAANDTFNTILQL 637


>gi|239834445|ref|ZP_04682773.1| flagellar basal-body rod protein FlgB [Ochrobactrum intermedium LMG
           3301]
 gi|239822508|gb|EEQ94077.1| flagellar basal-body rod protein FlgB [Ochrobactrum intermedium LMG
           3301]
          Length = 126

 Score = 34.1 bits (76), Expect = 7.5,   Method: Composition-based stats.
 Identities = 21/120 (17%), Positives = 33/120 (27%), Gaps = 4/120 (3%)

Query: 8   AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
             +A       S R   ++ N+ANA T       D      +  +  +  +    +    
Sbjct: 7   FDLAARQAQWLSVRQATVAGNVANANTPDFR-ARDVQPFADVLDKTQLTMAATSPLHLEA 65

Query: 68  VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
                      P               V+V  E     E  R Y  N   +K  H MM +
Sbjct: 66  EADGIAGARLRPDDITEQTHS---GNTVDVEQEMMKAGEIAREYSLNTSIVKAFHRMMLS 122


>gi|203284102|ref|YP_002221842.1| flagellar hook-associated protein [Borrelia duttonii Ly]
 gi|201083545|gb|ACH93136.1| flagellar hook-associated protein [Borrelia duttonii Ly]
          Length = 627

 Score = 34.1 bits (76), Expect = 7.5,   Method: Composition-based stats.
 Identities = 13/80 (16%), Positives = 22/80 (27%), Gaps = 7/80 (8%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGS-------DPYRRKTISFEE 53
          MD   +   I    L      M  +  N+ NA   G +            Y  +     +
Sbjct: 1  MDSTFSGIEIGKKSLFAHKDAMNTVGHNLTNATKPGYSRQRIIMKTEMPIYAPQLNRANK 60

Query: 54 VMHGSGGVRVKKIGVDQSTF 73
                G+ V+ I   +   
Sbjct: 61 AGQLGQGIMVQSIERIRDEL 80


>gi|317130315|ref|YP_004096597.1| flagellar hook-associated protein FlgK [Bacillus cellulosilyticus
           DSM 2522]
 gi|315475263|gb|ADU31866.1| flagellar hook-associated protein FlgK [Bacillus cellulosilyticus
           DSM 2522]
          Length = 550

 Score = 34.1 bits (76), Expect = 7.6,   Method: Composition-based stats.
 Identities = 7/37 (18%), Positives = 16/37 (43%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            V++  E  +M +    Y A  + I    +M+   ++
Sbjct: 507 GVSLDEEMTNMIQFQHAYNAAARNITMIDEMLDIIIN 543


>gi|227112518|ref|ZP_03826174.1| flagellar basal body rod protein FlgB [Pectobacterium carotovorum
           subsp. brasiliensis PBR1692]
 gi|227328335|ref|ZP_03832359.1| flagellar basal body rod protein FlgB [Pectobacterium carotovorum
           subsp. carotovorum WPP14]
          Length = 138

 Score = 34.1 bits (76), Expect = 7.6,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 48/132 (36%), Gaps = 5/132 (3%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG-G 60
           D L AS       L +++ R +I++ NIANA T G       +  +     E    +G G
Sbjct: 3   DKLDASLRFQQEALNLRAQRQEILAANIANADTPGYQARDIDFASQLSKTMEQGRVNGTG 62

Query: 61  VRVKKIGVDQSTFVEEFDPGHP---VANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
           + +K   V          P             +    V++  E  +  + +  Y ++L  
Sbjct: 63  IALKTTSVRHIPAQNFQPPELDLLYRVPDQPALDGNTVDMDRERTNFADNSLKYQSSLTV 122

Query: 118 I-KQSHDMMTTT 128
           +  Q   MM+  
Sbjct: 123 LGGQIKGMMSVL 134


>gi|221636051|ref|YP_002523927.1| flagellar basal-body rod protein FlgB [Thermomicrobium roseum DSM
           5159]
 gi|221157824|gb|ACM06942.1| flagellar basal-body rod protein FlgB [Thermomicrobium roseum DSM
           5159]
          Length = 138

 Score = 34.1 bits (76), Expect = 7.6,   Method: Composition-based stats.
 Identities = 20/128 (15%), Positives = 40/128 (31%), Gaps = 3/128 (2%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR--RKTISFEEVMHGS 58
           M   I    +    L   + R Q+ + N+ANA T G    +  +    + +         
Sbjct: 1   MAGTIDPIGVLARTLDALALRQQVTASNVANAETPGFRGQAVRFEDLLQAMLNGTFARLP 60

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIV-KYPNVNVLVETADMRETNRLYMANLQT 117
                 +     ++      P       +       NV++  E   + ET   Y A  + 
Sbjct: 61  LVRTDSRHIAVTASSPSALQPEVVELTGTRYRPDGNNVDIEREMGLLAETTLRYSAVSEV 120

Query: 118 IKQSHDMM 125
           + +   M+
Sbjct: 121 LARRLAML 128


>gi|203287640|ref|YP_002222655.1| flagellar hook-associated protein [Borrelia recurrentis A1]
 gi|201084860|gb|ACH94434.1| flagellar hook-associated protein [Borrelia recurrentis A1]
          Length = 627

 Score = 34.1 bits (76), Expect = 7.6,   Method: Composition-based stats.
 Identities = 13/80 (16%), Positives = 22/80 (27%), Gaps = 7/80 (8%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGS-------DPYRRKTISFEE 53
          MD   +   I    L      M  +  N+ NA   G +            Y  +     +
Sbjct: 1  MDSTFSGIEIGKKSLFAHKDAMNTVGHNLTNATKPGYSRQRIIMKTEMPIYAPQLNRANK 60

Query: 54 VMHGSGGVRVKKIGVDQSTF 73
                G+ V+ I   +   
Sbjct: 61 AGQLGQGIMVQSIERIRDEL 80


>gi|162661125|gb|EDQ48677.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 515

 Score = 34.1 bits (76), Expect = 7.6,   Method: Composition-based stats.
 Identities = 17/92 (18%), Positives = 32/92 (34%), Gaps = 1/92 (1%)

Query: 14  GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTF 73
            L +++ R+ II+ NIANA T G       ++         M          I   +   
Sbjct: 396 ALKIRTQRLAIIASNIANADTPGYQAKDLDFKEALERSNATMLSVSSTSKGHIPSSEMKS 455

Query: 74  VEEFDPGHPVANASGIVKYPNVNVLVETADMR 105
           + +       A+ +  +    V++  E A   
Sbjct: 456 IYDTQVAFRPASQNS-LDRNTVDLDQERASFI 486


>gi|150395479|ref|YP_001325946.1| flagellar basal body rod protein FlgF [Sinorhizobium medicae
           WSM419]
 gi|150026994|gb|ABR59111.1| flagellar basal body rod protein [Sinorhizobium medicae WSM419]
          Length = 241

 Score = 34.1 bits (76), Expect = 7.6,   Method: Composition-based stats.
 Identities = 7/45 (15%), Positives = 18/45 (40%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             G ++  NVN + E + +    R +      ++ S   +   ++
Sbjct: 191 MQGFLEESNVNAVQEMSQLIMITRAFDNVTALMRDSEGSIDKAIE 235


>gi|331667482|ref|ZP_08368346.1| flagellar hook-associated protein 1 (HAP1) [Escherichia coli TA271]
 gi|331065067|gb|EGI36962.1| flagellar hook-associated protein 1 (HAP1) [Escherichia coli TA271]
          Length = 218

 Score = 33.7 bits (75), Expect = 7.7,   Method: Composition-based stats.
 Identities = 15/110 (13%), Positives = 35/110 (31%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           + +  + A SGL    A +   S NI++    G T  +    +   +         GV V
Sbjct: 1   MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGGWVGNGVYV 60

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMA 113
             +  +   F+          ++    +Y  ++ +        ++     
Sbjct: 61  SGVQREYDAFITNQLRAAQTQSSGLTARYEQMSKIDNMLSTSTSSLATQM 110


>gi|183220164|ref|YP_001838160.1| flagellar basal body rod protein FlgB [Leptospira biflexa serovar
           Patoc strain 'Patoc 1 (Paris)']
 gi|189910284|ref|YP_001961839.1| flagellar basal body rod protein FlgB [Leptospira biflexa serovar
           Patoc strain 'Patoc 1 (Ames)']
 gi|167774960|gb|ABZ93261.1| Endoflagellar proximal basal body rod protein [Leptospira biflexa
           serovar Patoc strain 'Patoc 1 (Ames)']
 gi|167778586|gb|ABZ96884.1| Flagellar basal-body rod protein FlgB [Leptospira biflexa serovar
           Patoc strain 'Patoc 1 (Paris)']
          Length = 143

 Score = 33.7 bits (75), Expect = 7.7,   Method: Composition-based stats.
 Identities = 18/125 (14%), Positives = 38/125 (30%), Gaps = 8/125 (6%)

Query: 14  GLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTF 73
           GL   + R ++I++NIANA           +        E         V     +    
Sbjct: 17  GLGAATQRRKVITDNIANADVPNFKRSEVVFESMLKRAIESEKIEKEKAVPTKISNDRHI 76

Query: 74  VEEFDPGHPVANASGIVKY--------PNVNVLVETADMRETNRLYMANLQTIKQSHDMM 125
                  +  A     + Y         NV++  E  +  +    Y   +  + Q++ ++
Sbjct: 77  EFFKPLDYRDAKPKTNLDYLTTMRPDGNNVDIEKEVVEANQNQMSYSLMIDRLNQNNRLL 136

Query: 126 TTTLD 130
              + 
Sbjct: 137 NIVMR 141


>gi|89902483|ref|YP_524954.1| flagellar hook-associated protein [Rhodoferax ferrireducens T118]
 gi|89347220|gb|ABD71423.1| Flagellar hook-associated protein [Rhodoferax ferrireducens T118]
          Length = 644

 Score = 33.7 bits (75), Expect = 7.7,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 26/75 (34%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +     +    L      +Q    NIAN  T G +  S   +  T  F    +   GV +
Sbjct: 1  MSGLLSVGTRALQANQVMLQTAGNNIANVNTPGYSRQSAVLQTSTGQFTGGGYIGKGVDI 60

Query: 64 KKIGVDQSTFVEEFD 78
          + I  + S F+    
Sbjct: 61 QTIQRNFSAFLTRQS 75



 Score = 33.7 bits (75), Expect = 8.1,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 20/41 (48%)

Query: 93  PNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
             VN+  E A + +  + Y A+ + ++ +  +  T +  LR
Sbjct: 604 SGVNLDEEAAKLLQYQQAYQASAKMMQIAQGIFDTLIQTLR 644


>gi|84624628|ref|YP_452000.1| hypothetical protein XOO_2971 [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|84368568|dbj|BAE69726.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF
           311018]
          Length = 98

 Score = 33.7 bits (75), Expect = 7.7,   Method: Composition-based stats.
 Identities = 22/128 (17%), Positives = 48/128 (37%), Gaps = 31/128 (24%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
           ++ + IA+SG+ V + R Q+ + N+A     G        +R++++     +G     V 
Sbjct: 1   MSISSIASSGMQVAALRQQVAASNVARLPVDGS-------QRQSVAASTQANGGVAANVV 53

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
            +  D S                            +  +       + AN   +++S +M
Sbjct: 54  NVSADPSAP------------------------ATDLVEGVSARNDFQANANVLRRSDEM 89

Query: 125 MTTTLDLL 132
           + + LD+L
Sbjct: 90  LGSLLDVL 97


>gi|288958563|ref|YP_003448904.1| flagellar hook-associated protein 1 [Azospirillum sp. B510]
 gi|288910871|dbj|BAI72360.1| flagellar hook-associated protein 1 [Azospirillum sp. B510]
          Length = 465

 Score = 33.7 bits (75), Expect = 7.8,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 17/38 (44%)

Query: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDT 38
          M  L+++   A + L      + ++S NIA A     T
Sbjct: 1  MSSLLSALQTATASLRAVQTNVSVVSGNIAKANDPTRT 38


>gi|291288219|ref|YP_003505035.1| flagellar basal-body rod protein FlgB [Denitrovibrio acetiphilus
           DSM 12809]
 gi|290885379|gb|ADD69079.1| flagellar basal-body rod protein FlgB [Denitrovibrio acetiphilus
           DSM 12809]
          Length = 136

 Score = 33.7 bits (75), Expect = 7.8,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 43/135 (31%), Gaps = 13/135 (9%)

Query: 1   MDYLIASAHIA--NSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGS 58
           M  +     I    +GL   S +  +I+ENIAN  T G       Y+ + + F +VM   
Sbjct: 1   MQGIFERMKIDTLATGLRTASVKNGVIAENIANKDTPG-------YKAQDLEFYDVMDEV 53

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
            G   K       T  +   P     + S  V   N   +    D  + N  Y       
Sbjct: 54  LGTGKK--LPLTRTNEKHLPPAGRGVDPSSFVYQQNNPSVRN--DGNDVNVDYEMTQMAE 109

Query: 119 KQSHDMMTTTLDLLR 133
                 M   +   +
Sbjct: 110 NTIRYNMMADMTAGK 124


>gi|32490795|ref|NP_871049.1| hypothetical protein WGLp046 [Wigglesworthia glossinidia
          endosymbiont of Glossina brevipalpis]
 gi|25166001|dbj|BAC24192.1| flgK [Wigglesworthia glossinidia endosymbiont of Glossina
          brevipalpis]
          Length = 545

 Score = 33.7 bits (75), Expect = 7.8,   Method: Composition-based stats.
 Identities = 10/73 (13%), Positives = 22/73 (30%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +     +A + L      +  I +NIAN+ ++                    +   G   
Sbjct: 1  MFNLYRLAGNALKAGEIALDTIGKNIANSTSSSYHKEKAILSASEGKLISEGYIGNGAHY 60

Query: 64 KKIGVDQSTFVEE 76
           ++   Q   + E
Sbjct: 61 NRLTRIQDELMSE 73


>gi|83816398|ref|YP_446735.1| flagellar hook-associated protein FlgK [Salinibacter ruber DSM
          13855]
 gi|83757792|gb|ABC45905.1| flagellar hook-associated protein FlgK [Salinibacter ruber DSM
          13855]
          Length = 600

 Score = 33.7 bits (75), Expect = 7.9,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 27/71 (38%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
            I ++ L     ++   S+NIANA + G          ++++   +   +G   V   G
Sbjct: 7  FDIGSTSLRAVGEKIDATSQNIANAESEGYRRRRVSLSSRSVAATGLYASNGAQDVTSSG 66

Query: 68 VDQSTFVEEFD 78
          V    F    D
Sbjct: 67 VGVEQFERVRD 77


>gi|313639076|gb|EFS04057.1| flagellar basal body rod protein FlgG [Listeria seeligeri FSL
           S4-171]
          Length = 239

 Score = 33.7 bits (75), Expect = 7.9,   Method: Composition-based stats.
 Identities = 12/99 (12%), Positives = 30/99 (30%), Gaps = 1/99 (1%)

Query: 30  ANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV-DQSTFVEEFDPGHPVANASG 88
           A A        ++ Y  +  +          +     G    +       P       +G
Sbjct: 133 AEANGDLYNAETNAYLGRLGTRFVSADQVDNLAKDGEGRLHVNGTNTMNLPAGQGIIQNG 192

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
           +++  NV++ VE   + +  R+  A+   +     +   
Sbjct: 193 VLETSNVDLGVEMVQLMDNQRMVQASKNIVNMFDKVYDK 231


>gi|327193033|gb|EGE59945.1| flagellar basal-body rod protein [Rhizobium etli CNPAF512]
          Length = 130

 Score = 33.7 bits (75), Expect = 8.0,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 40/114 (35%), Gaps = 4/114 (3%)

Query: 19  SARMQIISENIANARTTG-DTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEF 77
           + R Q+++ NIANA T         P+       +  M  +        G D S   +  
Sbjct: 18  TIRQQVVAGNIANANTPKFRAKDVTPFDAVLDKSDITMTRTNPAHFS--GNDFSETGDID 75

Query: 78  DPGHPVANASGIVKYPN-VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
                +    GI +  N V +  E +   +  R Y  N   +   + MM  T+ 
Sbjct: 76  VKDAALDQEIGIQESGNTVGLAEELSKSGDIKRQYDLNTSLVSSFNRMMLMTVR 129


>gi|326386931|ref|ZP_08208545.1| Flagellar basal-body rod FlgF [Novosphingobium nitrogenifigens DSM
           19370]
 gi|326208611|gb|EGD59414.1| Flagellar basal-body rod FlgF [Novosphingobium nitrogenifigens DSM
           19370]
          Length = 247

 Score = 33.7 bits (75), Expect = 8.0,   Method: Composition-based stats.
 Identities = 17/104 (16%), Positives = 36/104 (34%), Gaps = 5/104 (4%)

Query: 29  IANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASG 88
           +AN     D P +   R K  S+       G   + ++    +   +E       A    
Sbjct: 145 LANDPANPDQPPNAVGRIKLASYTGSQIEKGLDGLFRVVGGGALPADENAKLVSGA---- 200

Query: 89  IVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
            ++  NV+      +M E  RL+    + +  + +    +  L+
Sbjct: 201 -LEKSNVDPTSVLVEMVEAQRLFDMRTKVVSTARENDEKSTSLM 243


>gi|297538897|ref|YP_003674666.1| flagellar basal-body rod protein FlgF [Methylotenera sp. 301]
 gi|297258244|gb|ADI30089.1| flagellar basal-body rod protein FlgF [Methylotenera sp. 301]
          Length = 246

 Score = 33.7 bits (75), Expect = 8.0,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 18/43 (41%)

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLL 132
           ++  NVNV+     M    R +   ++ ++ + +       LL
Sbjct: 201 LESSNVNVIDAMVSMISLARQFETQMKLMQSAENNANKASQLL 243


>gi|221635614|ref|YP_002523490.1| flagellin [Thermomicrobium roseum DSM 5159]
 gi|221157667|gb|ACM06785.1| flagellin [Thermomicrobium roseum DSM 5159]
          Length = 402

 Score = 33.7 bits (75), Expect = 8.0,   Method: Composition-based stats.
 Identities = 21/132 (15%), Positives = 41/132 (31%), Gaps = 20/132 (15%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
           D  I +   + SGL          ++N+ NA     +  ++           + H    +
Sbjct: 291 DSAITAFSTSLSGLNSAQV---TAAQNLINALDGAISYVNEVRSYLGAVQNRLEHAIANL 347

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
            V+   +  S                      +V++  E         L  A +  + Q+
Sbjct: 348 GVQHENLTASESRIR-----------------DVDMAKEMVIFTRNQILQQAGVAVLSQA 390

Query: 122 HDMMTTTLDLLR 133
           + M  + L LLR
Sbjct: 391 NAMPQSVLQLLR 402


>gi|103488393|ref|YP_617954.1| flagellar hook-associated protein [Sphingopyxis alaskensis
          RB2256]
 gi|98978470|gb|ABF54621.1| Flagellar hook-associated protein [Sphingopyxis alaskensis
          RB2256]
          Length = 441

 Score = 33.7 bits (75), Expect = 8.0,   Method: Composition-based stats.
 Identities = 13/35 (37%), Positives = 17/35 (48%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDT 38
          +     I  SGL   S  +  I +NIANA+T G  
Sbjct: 1  MSDLLGIGYSGLKAYSRALSTIGDNIANAQTPGYA 35


>gi|328545508|ref|YP_004305617.1| flagellar basal-body rod protein B [polymorphum gilvum SL003B-26A1]
 gi|326415249|gb|ADZ72312.1| Flagellar basal-body rod protein B [Polymorphum gilvum SL003B-26A1]
          Length = 126

 Score = 33.7 bits (75), Expect = 8.0,   Method: Composition-based stats.
 Identities = 22/112 (19%), Positives = 33/112 (29%), Gaps = 6/112 (5%)

Query: 19  SARMQIISENIANARTTG-DTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEF 77
           S R   I+ENIAN+ T G       P+          M  + G  +            E 
Sbjct: 18  SVRQATIAENIANSDTPGFAARDVVPFASVFDQTRLAMTATHGAHMGGAAEQAEPAEVE- 76

Query: 78  DPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
                           +V++  E     E  R +  N    K  H M   ++
Sbjct: 77  ----KSETWQVTHSGNSVSLEQELMKAGEVARSHALNTSLAKSFHRMYLASV 124


>gi|295700205|ref|YP_003608098.1| fagellar hook-basal body protein [Burkholderia sp. CCGE1002]
 gi|295439418|gb|ADG18587.1| fagellar hook-basal body protein [Burkholderia sp. CCGE1002]
          Length = 383

 Score = 33.7 bits (75), Expect = 8.0,   Method: Composition-based stats.
 Identities = 19/75 (25%), Positives = 24/75 (32%), Gaps = 3/75 (4%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY---RRKTISFEEVMHGSGGVRV 63
          S     SGL   S  + +I  NIANA T G   G+  +       +          GV  
Sbjct: 2  SYQTGLSGLHAASNDLDVIGNNIANAHTVGFKQGTAVFSDMYANAMLGATNNQIGIGVAT 61

Query: 64 KKIGVDQSTFVEEFD 78
            I  D S       
Sbjct: 62 SAIVRDFSEGTPTQT 76


>gi|51598554|ref|YP_072742.1| flagellar basal body rod protein FlgB [Borrelia garinii PBi]
 gi|51573125|gb|AAU07150.1| flagellar basal-body rod protein [Borrelia garinii PBi]
          Length = 135

 Score = 33.7 bits (75), Expect = 8.0,   Method: Composition-based stats.
 Identities = 21/119 (17%), Positives = 39/119 (32%), Gaps = 11/119 (9%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTG--------DTPGSDPYRRKTISFE 52
           M+    S   ++  L V S R  +IS+NIAN  T          ++     +  K  +  
Sbjct: 1   MNDFERSIDFSHRYLDVLSLRQGVISDNIANVDTPNFKRSRISFESELEKAFLNKGKNDL 60

Query: 53  EVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLY 111
            ++  S          + S         H     +      NV++  E   + +   +Y
Sbjct: 61  SLIKSSDKHLSGLKNPEYSDVKPHRVLDHFSTMNNN---GNNVDIDSEIKALVQNQMMY 116


>gi|209547922|ref|YP_002279839.1| flagellar basal body rod protein FlgF [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209533678|gb|ACI53613.1| flagellar basal body rod protein [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 244

 Score = 33.7 bits (75), Expect = 8.1,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 19/45 (42%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             G ++  NVN + E   + E NR + +    ++ S D     + 
Sbjct: 194 EQGYLENSNVNAMREITQLIEVNRAFESVSSLMRDSEDSFKEAVQ 238



 Score = 33.7 bits (75), Expect = 8.6,   Method: Composition-based stats.
 Identities = 9/54 (16%), Positives = 23/54 (42%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG 57
          + +  +++ S       R+  I++N+AN  TTG       +     + +  ++ 
Sbjct: 1  MQSGLYVSLSSQMALEKRLNTIADNMANVNTTGFRATEVKFDEMVAATKNKLNT 54


>gi|293395580|ref|ZP_06639863.1| flagellar basal-body rod protein FlgB [Serratia odorifera DSM 4582]
 gi|291421899|gb|EFE95145.1| flagellar basal-body rod protein FlgB [Serratia odorifera DSM 4582]
          Length = 137

 Score = 33.7 bits (75), Expect = 8.2,   Method: Composition-based stats.
 Identities = 23/132 (17%), Positives = 44/132 (33%), Gaps = 5/132 (3%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
           D L A+       L +++ R +I++ NIANA T G       +  +          SG  
Sbjct: 3   DKLDAALRFGQEALNLRAQRQEILAGNIANADTPGYQARDIDFASQLNKVMAQGRASGSG 62

Query: 62  RVKKIGVDQSTFVEEFDPGH----PVANASGIVKYPNVNVLVETADMRETNRLYMANLQT 117
               +   +    +   P              +    V++  E  +  + +  Y  +L  
Sbjct: 63  VALSLTSARHIPAQNLQPPQLDLLFRVPDQPSIDGNTVDMDRERTNFADNSLKYQTDLTL 122

Query: 118 IK-QSHDMMTTT 128
           +  Q   MM+  
Sbjct: 123 LNGQIKGMMSVL 134


>gi|255021354|ref|ZP_05293402.1| Flagellar hook protein flgE [Acidithiobacillus caldus ATCC 51756]
 gi|254969217|gb|EET26731.1| Flagellar hook protein flgE [Acidithiobacillus caldus ATCC 51756]
          Length = 419

 Score = 33.7 bits (75), Expect = 8.2,   Method: Composition-based stats.
 Identities = 19/95 (20%), Positives = 30/95 (31%), Gaps = 7/95 (7%)

Query: 5  IASAHIANSGLAVQSARMQIISENIANARTTGDTP-----GSDPYRRKTISFEEVMHGSG 59
          + +   A SGL   +  +Q++  NI+NA T G                  S         
Sbjct: 1  MGAFSTALSGLQAANTDLQVLGNNISNANTVGFKSSNAEFADAYGAALVGSAPTYGQVGI 60

Query: 60 GVRVKKIGV--DQSTFVEEFDPGHPVANASGIVKY 92
          G RV  +     Q       +P     N +G  + 
Sbjct: 61 GTRVMTVAQQFTQGNIQTTNNPLDVAINGNGFFQL 95


>gi|188997558|ref|YP_001931809.1| flagellar basal body rod protein [Sulfurihydrogenibium sp. YO3AOP1]
 gi|188932625|gb|ACD67255.1| flagellar basal body rod protein [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 236

 Score = 33.7 bits (75), Expect = 8.2,   Method: Composition-based stats.
 Identities = 9/66 (13%), Positives = 24/66 (36%)

Query: 68  VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
           V  S +  +           G ++  N+N++ E  +M   +R +   +   K    +   
Sbjct: 170 VGNSYYQGQEQQITNFEIKQGYLEGANLNIVKEMVEMINNHRRFDIYMNLAKYLDMLEGK 229

Query: 128 TLDLLR 133
             ++ +
Sbjct: 230 VNEIGK 235


>gi|121607564|ref|YP_995371.1| flagellar basal-body rod protein FlgB [Verminephrobacter eiseniae
           EF01-2]
 gi|121552204|gb|ABM56353.1| flagellar basal-body rod protein FlgB [Verminephrobacter eiseniae
           EF01-2]
          Length = 141

 Score = 33.7 bits (75), Expect = 8.2,   Method: Composition-based stats.
 Identities = 26/138 (18%), Positives = 47/138 (34%), Gaps = 15/138 (10%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
           D +        + L +++ R + I+ NIANA T G       +     +  EV     G+
Sbjct: 3   DKMTGQLGFHGAALVLRAQRQRTIASNIANADTPGYAARDFKFG---DALREVAGMGSGL 59

Query: 62  RVKKIG-VDQSTFVEEFDPGHPVANASGI----------VKYPNVNVLVETADMRETNRL 110
            ++  G  D         PG   A+  G           +    V++  E A   +    
Sbjct: 60  ALRGAGSTDPRHIPLPALPGSASADRQGASGYAVQTAPSLDNSTVDMDRERASFVDNAVR 119

Query: 111 YMANLQTIK-QSHDMMTT 127
           Y   L+ +  +   M+  
Sbjct: 120 YETTLRFLNGRVKTMLGA 137


>gi|89895708|ref|YP_519195.1| hypothetical protein DSY2962 [Desulfitobacterium hafniense Y51]
 gi|89335156|dbj|BAE84751.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 129

 Score = 33.7 bits (75), Expect = 8.3,   Method: Composition-based stats.
 Identities = 19/126 (15%), Positives = 37/126 (29%), Gaps = 1/126 (0%)

Query: 5   IASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVK 64
               +I    L   S R ++++ N+AN  T         +            G   ++V 
Sbjct: 3   TPVINILEKSLDASSLRYKVLANNVANVDTPDFKRSDVDFDLLLGEAMGQTGGELPLKVT 62

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
                Q T  +                  NV++  E  ++ E    Y +  + I      
Sbjct: 63  SERHLQKTGFDSSGVVQAQGTTYRN-DGNNVDIDKEMVNVAENGIYYNSVTRAISAQLSH 121

Query: 125 MTTTLD 130
           + T + 
Sbjct: 122 LRTVIT 127


>gi|85706143|ref|ZP_01037238.1| flagellar hook-associated protein [Roseovarius sp. 217]
 gi|85669307|gb|EAQ24173.1| flagellar hook-associated protein [Roseovarius sp. 217]
          Length = 459

 Score = 33.7 bits (75), Expect = 8.3,   Method: Composition-based stats.
 Identities = 11/51 (21%), Positives = 21/51 (41%), Gaps = 1/51 (1%)

Query: 82  PVANASGIVKYPN-VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
             A     ++  N V+   E   +    + + AN + I+   DM+ T L +
Sbjct: 409 GQATEFRTLELANGVDSDAELQRLLLVEQAFGANARMIQTIDDMLDTLLRI 459


>gi|332994165|gb|AEF04220.1| flagellar basal-body rod protein FlgB [Alteromonas sp. SN2]
          Length = 143

 Score = 33.7 bits (75), Expect = 8.3,   Method: Composition-based stats.
 Identities = 30/126 (23%), Positives = 44/126 (34%), Gaps = 8/126 (6%)

Query: 13  SGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSG--------GVRVK 64
           S LA+++ RM++IS N+ANA T G       + +   S      G              K
Sbjct: 14  SALAIRTDRMEVISGNLANANTPGYKAKDIDFNKAMESAMSAQDGQHKLGGGSLVRTHDK 73

Query: 65  KIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDM 124
            IG D S+    F+  + +           V V  E     +    Y A L+ I      
Sbjct: 74  HIGGDVSSVASNFEMQYRIPTQPDTGDGNTVEVQAERNRFLDNGLRYQATLEFINGKVKG 133

Query: 125 MTTTLD 130
           M   L 
Sbjct: 134 MKKALS 139


>gi|330880522|gb|EGH14671.1| flagellar hook protein FlgE [Pseudomonas syringae pv. glycinea
          str. race 4]
          Length = 390

 Score = 33.7 bits (75), Expect = 8.3,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 17/39 (43%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYR 45
          S +I  SGL   +  + +   NIAN  TTG       + 
Sbjct: 2  SFNIGLSGLYAANKSLDVTGNNIANVATTGFKSSRAEFA 40


>gi|227871683|ref|ZP_03990096.1| flagellar hook-associated protein FlgK [Oribacterium sinus F0268]
 gi|227842482|gb|EEJ52699.1| flagellar hook-associated protein FlgK [Oribacterium sinus F0268]
          Length = 594

 Score = 33.7 bits (75), Expect = 8.3,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 20/43 (46%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +   V++  E A+M   +  Y A  + +   +D + T L + R
Sbjct: 552 QLSGVSLDEEAANMMTYSSSYNAAARLMTTLNDTLETLLAIGR 594


>gi|218290051|ref|ZP_03494218.1| protein of unknown function DUF1078 domain protein
           [Alicyclobacillus acidocaldarius LAA1]
 gi|218239885|gb|EED07073.1| protein of unknown function DUF1078 domain protein
           [Alicyclobacillus acidocaldarius LAA1]
          Length = 262

 Score = 33.7 bits (75), Expect = 8.3,   Method: Composition-based stats.
 Identities = 10/56 (17%), Positives = 18/56 (32%)

Query: 76  EFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
              P    +   G V   NV+     A +      Y  N Q I  ++ ++     +
Sbjct: 202 VAVPARNSSVIQGAVNASNVDETAAMAQLVAAQDFYEENAQAISMANQLLGLADTI 257


>gi|316932833|ref|YP_004107815.1| flagellar basal body rod protein [Rhodopseudomonas palustris DX-1]
 gi|315600547|gb|ADU43082.1| flagellar basal body rod protein [Rhodopseudomonas palustris DX-1]
          Length = 136

 Score = 33.7 bits (75), Expect = 8.4,   Method: Composition-based stats.
 Identities = 18/119 (15%), Positives = 36/119 (30%), Gaps = 5/119 (4%)

Query: 15  LAVQSARMQIISENIANARTTGDTP----GSDPYRRKTISFEEVMHGSGGVRVKKIGVDQ 70
           +     R +++++NIAN+ T G  P              +    +     +R   + +  
Sbjct: 16  MQWHQQRQRVLADNIANSDTPGFKPLDLVAPTFDPSGRPTAGSPVGSLPMMRTSAVHIAP 75

Query: 71  STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
           S    E                  VN+  E   +      Y A      +S  ++ T +
Sbjct: 76  SGG-TESFSQDRRGGMQTRPAGNAVNLEDEMLKVSSNQGGYAAATALYTRSLGVLKTAI 133


>gi|15887920|ref|NP_353601.1| flagellar hook-associated protein FlgK [Agrobacterium tumefaciens
           str. C58]
 gi|15155516|gb|AAK86386.1| flagellar hook associated protein [Agrobacterium tumefaciens str.
           C58]
          Length = 492

 Score = 33.7 bits (75), Expect = 8.4,   Method: Composition-based stats.
 Identities = 7/47 (14%), Positives = 21/47 (44%)

Query: 87  SGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
                   V++  E + + +  + Y A  + +    +M+ + +D++R
Sbjct: 446 KSYSNNTAVSLDEELSLLMDIEQSYKAATKLVTTVDEMLKSLMDMVR 492


>gi|307318906|ref|ZP_07598337.1| flagellar basal-body rod protein FlgF [Sinorhizobium meliloti AK83]
 gi|306895320|gb|EFN26075.1| flagellar basal-body rod protein FlgF [Sinorhizobium meliloti AK83]
          Length = 241

 Score = 33.7 bits (75), Expect = 8.5,   Method: Composition-based stats.
 Identities = 7/45 (15%), Positives = 18/45 (40%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             G ++  NVN + E + +    R +      ++ S   +   ++
Sbjct: 191 MQGFLEESNVNAIQEMSQLIMITRAFDNVTALMRDSEGSLDKAIE 235


>gi|209547925|ref|YP_002279842.1| flagellar basal body rod protein FlgB [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209533681|gb|ACI53616.1| flagellar basal-body rod protein [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 130

 Score = 33.7 bits (75), Expect = 8.5,   Method: Composition-based stats.
 Identities = 20/115 (17%), Positives = 38/115 (33%), Gaps = 6/115 (5%)

Query: 19  SARMQIISENIANARTTG-DTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEF 77
           + R Q+++ NIANA T         P+       +  M  +    +       S  ++  
Sbjct: 18  TIRQQVVAGNIANANTPKFRAKDVTPFDAVLDKSDITMARTNPAHLSGNDFSASGDIDV- 76

Query: 78  DPGHPVANASGIVKYPN--VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
                  +    V+     V +  E +   +  R Y  N   +   + MM  T+ 
Sbjct: 77  --KDASLDQEIGVQESGNTVGLAEELSKSGDIKRQYDLNTSLVSSFNRMMLMTVR 129


>gi|90418364|ref|ZP_01226276.1| putative flagellar hook-associated protein FlgK [Aurantimonas
           manganoxydans SI85-9A1]
 gi|90338036|gb|EAS51687.1| putative flagellar hook-associated protein FlgK [Aurantimonas
           manganoxydans SI85-9A1]
          Length = 499

 Score = 33.7 bits (75), Expect = 8.5,   Method: Composition-based stats.
 Identities = 8/40 (20%), Positives = 17/40 (42%)

Query: 92  YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDL 131
              +N+  E   + +  R Y A+ + I     M+ + L +
Sbjct: 459 ATGINIDDEMTRLLDLERSYQASSKLISTVGQMIDSLLAI 498


>gi|241203103|ref|YP_002974199.1| flagellar basal body rod protein FlgB [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240856993|gb|ACS54660.1| flagellar basal body rod protein FlgB [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 130

 Score = 33.7 bits (75), Expect = 8.5,   Method: Composition-based stats.
 Identities = 20/115 (17%), Positives = 38/115 (33%), Gaps = 6/115 (5%)

Query: 19  SARMQIISENIANARTTG-DTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEF 77
           + R Q+++ NIANA T         P+     +    M  +    +       S  ++  
Sbjct: 18  TIRQQVVAGNIANANTPKFHAKDVTPFDAVLDNSNINMARTNPAHLSGNDFSDSGDIDV- 76

Query: 78  DPGHPVANASGIVKYPN--VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
                  +    V+     V +  E +   +  R Y  N   +   + MM  T+ 
Sbjct: 77  --KDAALDQEIGVQESGNTVGLAEELSKSGDIKRQYDLNTSLVSSFNRMMLMTVR 129


>gi|52080220|ref|YP_079011.1| flagellar basal body rod protein FlgB [Bacillus licheniformis ATCC
           14580]
 gi|52785597|ref|YP_091426.1| flagellar basal body rod protein FlgB [Bacillus licheniformis ATCC
           14580]
 gi|319646001|ref|ZP_08000231.1| FlgB protein [Bacillus sp. BT1B_CT2]
 gi|52003431|gb|AAU23373.1| flagellar basal-body rod protein [Bacillus licheniformis ATCC
           14580]
 gi|52348099|gb|AAU40733.1| FlgB [Bacillus licheniformis ATCC 14580]
 gi|317391751|gb|EFV72548.1| FlgB protein [Bacillus sp. BT1B_CT2]
          Length = 129

 Score = 33.7 bits (75), Expect = 8.5,   Method: Composition-based stats.
 Identities = 18/119 (15%), Positives = 37/119 (31%), Gaps = 4/119 (3%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD    + H     L   + + ++I+ N+AN  T         ++         ++    
Sbjct: 1   MDIFSGTIHRLEGALNQANIKQKVITNNLANVDTPNYKAKKVSFKNVLNEESSRINAIKT 60

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
                               +     +G     NV+V  E ++M +    Y A ++ I 
Sbjct: 61  DYRHIDFKGNEPNYSVVSRKNTTYQENGN----NVDVDQEMSEMAKNQIQYQALVERIS 115


>gi|170748127|ref|YP_001754387.1| flagellar basal body rod protein [Methylobacterium radiotolerans
          JCM 2831]
 gi|170654649|gb|ACB23704.1| flagellar basal body rod protein [Methylobacterium radiotolerans
          JCM 2831]
          Length = 246

 Score = 33.7 bits (75), Expect = 8.6,   Method: Composition-based stats.
 Identities = 10/88 (11%), Positives = 23/88 (26%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          + +S ++  S       R+  ++ N+AN  T G       +                   
Sbjct: 1  MQSSLYVTLSAQMALEQRLNTVAANVANLGTVGYRAEEVKFETILSQAGHRDVAFATPGE 60

Query: 64 KKIGVDQSTFVEEFDPGHPVANASGIVK 91
            +       ++   P        G + 
Sbjct: 61 TFLSRKAGPLIKTDSPLDVGLQGDGWLA 88


>gi|15964409|ref|NP_384762.1| flagellar basal body rod protein FlgF [Sinorhizobium meliloti 1021]
 gi|307311551|ref|ZP_07591192.1| flagellar basal-body rod protein FlgF [Sinorhizobium meliloti
           BL225C]
 gi|17380373|sp|O54248|FLGF_RHIME RecName: Full=Flagellar basal-body rod protein flgF
 gi|15073586|emb|CAC45228.1| Flagellar basal-body rod protein [Sinorhizobium meliloti 1021]
 gi|306899568|gb|EFN30197.1| flagellar basal-body rod protein FlgF [Sinorhizobium meliloti
           BL225C]
          Length = 241

 Score = 33.7 bits (75), Expect = 8.6,   Method: Composition-based stats.
 Identities = 7/45 (15%), Positives = 18/45 (40%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             G ++  NVN + E + +    R +      ++ S   +   ++
Sbjct: 191 MQGFLEESNVNAIQEMSQLIMITRAFDNVTALMRDSEGSLDKAIE 235


>gi|306846298|ref|ZP_07478859.1| flagellar basal body rod protein FlgF [Brucella sp. BO1]
 gi|306273293|gb|EFM55162.1| flagellar basal body rod protein FlgF [Brucella sp. BO1]
          Length = 243

 Score = 33.7 bits (75), Expect = 8.7,   Method: Composition-based stats.
 Identities = 13/88 (14%), Positives = 24/88 (27%)

Query: 6  ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
           S ++  S L     RM  I+ N+AN  T G       +                     
Sbjct: 4  NSIYVGLSSLITLERRMDAIAHNVANVSTVGFRGEGTKFDTIVSDKASDDVSFATAGKSY 63

Query: 66 IGVDQSTFVEEFDPGHPVANASGIVKYP 93
          I  +    ++  +P          + + 
Sbjct: 64 IRTEAGPLIKTDNPLDVAVKGDAWMSFS 91


>gi|301053310|ref|YP_003791521.1| flagellar basal-body rod protein [Bacillus anthracis CI]
 gi|300375479|gb|ADK04383.1| flagellar basal-body rod protein [Bacillus cereus biovar anthracis
           str. CI]
          Length = 243

 Score = 33.7 bits (75), Expect = 8.7,   Method: Composition-based stats.
 Identities = 9/64 (14%), Positives = 25/64 (39%), Gaps = 1/64 (1%)

Query: 71  STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT-TL 129
           +       P       + +++  NV++  E AD+    ++  A+ + +     +      
Sbjct: 180 AEGNIADLPNGVGTVKNYMLENSNVDMTKEMADLMTDQKMISASQRVMTSFDKIYEKEAN 239

Query: 130 DLLR 133
           ++LR
Sbjct: 240 EILR 243


>gi|228938857|ref|ZP_04101457.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar
           berliner ATCC 10792]
 gi|228971738|ref|ZP_04132359.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228978347|ref|ZP_04138724.1| Flagellar basal-body rod protein [Bacillus thuringiensis Bt407]
 gi|228781364|gb|EEM29565.1| Flagellar basal-body rod protein [Bacillus thuringiensis Bt407]
 gi|228787828|gb|EEM35786.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228820706|gb|EEM66731.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar
           berliner ATCC 10792]
          Length = 147

 Score = 33.7 bits (75), Expect = 8.7,   Method: Composition-based stats.
 Identities = 18/121 (14%), Positives = 38/121 (31%), Gaps = 7/121 (5%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFV 74
           +     +   +S NIANA T G       +  +      +   +         + Q+  +
Sbjct: 24  MNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQMNKSSALYKNNAADLKSNPDLYQTNEM 83

Query: 75  EEFDPGHPVA-------NASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
                            +        +V+V  E  D+ +TN+LY  ++  I   + +   
Sbjct: 84  HLPTVNTKNTYAKIQTKSMQTNKDGNSVDVTTEMLDLMKTNQLYGISVNAINTQYAINQA 143

Query: 128 T 128
            
Sbjct: 144 A 144


>gi|325922824|ref|ZP_08184552.1| hypothetical protein XGA_3583 [Xanthomonas gardneri ATCC 19865]
 gi|325546711|gb|EGD17837.1| hypothetical protein XGA_3583 [Xanthomonas gardneri ATCC 19865]
          Length = 98

 Score = 33.7 bits (75), Expect = 8.8,   Method: Composition-based stats.
 Identities = 19/123 (15%), Positives = 36/123 (29%), Gaps = 31/123 (25%)

Query: 10  IANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVD 69
           IA+SG+ V   R Q+ + N+A            P              + G     +   
Sbjct: 6   IASSGMQVAVLRQQVAASNMA----------RQPVDGSPRQAVAASTQANGGVAASVVDA 55

Query: 70  QSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
            S                            +  +       + AN   +++S +M+ + L
Sbjct: 56  SSDP---------------------SAPATDLVEGLSARNDFQANATALRRSDEMLGSLL 94

Query: 130 DLL 132
           D+L
Sbjct: 95  DVL 97


>gi|254720629|ref|ZP_05182440.1| flagellar basal body rod protein FlgF [Brucella sp. 83/13]
 gi|265985673|ref|ZP_06098408.1| flagellar basal body rod protein FlgF [Brucella sp. 83/13]
 gi|306837353|ref|ZP_07470232.1| flagellar basal body rod protein FlgF [Brucella sp. NF 2653]
 gi|264664265|gb|EEZ34526.1| flagellar basal body rod protein FlgF [Brucella sp. 83/13]
 gi|306407545|gb|EFM63745.1| flagellar basal body rod protein FlgF [Brucella sp. NF 2653]
          Length = 243

 Score = 33.7 bits (75), Expect = 8.8,   Method: Composition-based stats.
 Identities = 13/88 (14%), Positives = 24/88 (27%)

Query: 6  ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
           S ++  S L     RM  I+ N+AN  T G       +                     
Sbjct: 4  NSIYVGLSSLITLERRMDAIAHNVANVSTVGFRGEGTKFDTIVSDKASDDVSFATAGKSY 63

Query: 66 IGVDQSTFVEEFDPGHPVANASGIVKYP 93
          I  +    ++  +P          + + 
Sbjct: 64 IRTEAGPLIKTDNPLDVAVKGDAWMSFS 91


>gi|229155314|ref|ZP_04283425.1| Flagellar basal-body rod protein [Bacillus cereus ATCC 4342]
 gi|228628239|gb|EEK84955.1| Flagellar basal-body rod protein [Bacillus cereus ATCC 4342]
          Length = 135

 Score = 33.7 bits (75), Expect = 8.8,   Method: Composition-based stats.
 Identities = 17/121 (14%), Positives = 37/121 (30%), Gaps = 7/121 (5%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFV 74
           +     +   +S NIANA T G       +  +      +   +         + Q+  +
Sbjct: 12  MNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQMNKSSALYKNNAADLKGNPDLYQTNEM 71

Query: 75  EEFDPGHPVA-------NASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
                            +        +V+V  E  D+ + N+LY  ++  I   + +   
Sbjct: 72  HLPTVNTKNTYAKIQTKSMQTNKDGNSVDVTTEMLDLMKANQLYGISINAINTQYAINQA 131

Query: 128 T 128
            
Sbjct: 132 A 132


>gi|260428994|ref|ZP_05782971.1| flagellar basal body rod protein FlgB [Citreicella sp. SE45]
 gi|260419617|gb|EEX12870.1| flagellar basal body rod protein FlgB [Citreicella sp. SE45]
          Length = 125

 Score = 33.7 bits (75), Expect = 8.8,   Method: Composition-based stats.
 Identities = 20/128 (15%), Positives = 39/128 (30%), Gaps = 16/128 (12%)

Query: 4   LIASAHIANSGLAVQS---ARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           +  S  +  + +A+      +  I S+N+ANA   G      P   +T+        +  
Sbjct: 1   MFQSLDVFRTAMALARHSGLQQAISSQNVANADAPGYRGLEIPDFAETLRQPLTGQRATR 60

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRL-------YMA 113
                  +                N +       V++  E     E +R        Y +
Sbjct: 61  ATHLNGALQDGLPEPHTRRATVDPNGNT------VSLETEMVTAVEASRAHNKALSIYRS 114

Query: 114 NLQTIKQS 121
           NL  ++ S
Sbjct: 115 NLTLLRAS 122


>gi|154686034|ref|YP_001421195.1| flagellar basal body rod protein FlgB [Bacillus amyloliquefaciens
           FZB42]
 gi|154351885|gb|ABS73964.1| FlgB [Bacillus amyloliquefaciens FZB42]
          Length = 129

 Score = 33.7 bits (75), Expect = 8.8,   Method: Composition-based stats.
 Identities = 20/121 (16%), Positives = 42/121 (34%), Gaps = 8/121 (6%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60
           MD    +     + L     + ++++ NIAN  T       +   +K      +   +  
Sbjct: 1   MDLFSGTIQNLENALGRADIKQKVLTNNIANIDT------PNYKAKKVSFRNLLDQETSN 54

Query: 61  VRVKKIGVDQSTFVEEFDPGHPVANASGIVK--YPNVNVLVETADMRETNRLYMANLQTI 118
           +   K       F    D    V+++    +    NV++  E  D+ E    Y A ++ +
Sbjct: 55  LEAVKTDYRHVDFTGSGDDYSIVSSSDTSYQQNGNNVDIDKEMTDLAENQINYQALVERM 114

Query: 119 K 119
            
Sbjct: 115 S 115


>gi|90422625|ref|YP_530995.1| flagellar hook-associated protein FlgK [Rhodopseudomonas palustris
           BisB18]
 gi|90104639|gb|ABD86676.1| Flagellar hook-associated protein [Rhodopseudomonas palustris
           BisB18]
          Length = 490

 Score = 33.7 bits (75), Expect = 8.8,   Method: Composition-based stats.
 Identities = 10/36 (27%), Positives = 15/36 (41%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
            VN+  E   M +  R Y A+ + I     M+   L
Sbjct: 451 GVNMDDEMTFMLQVERTYSASSKLISAVDQMLKDLL 486


>gi|312126816|ref|YP_003991690.1| flagellar basal-body rod protein flgb [Caldicellulosiruptor
           hydrothermalis 108]
 gi|311776835|gb|ADQ06321.1| flagellar basal-body rod protein FlgB [Caldicellulosiruptor
           hydrothermalis 108]
          Length = 132

 Score = 33.7 bits (75), Expect = 8.9,   Method: Composition-based stats.
 Identities = 18/110 (16%), Positives = 32/110 (29%), Gaps = 5/110 (4%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY--RRKTISFEEVMHGS 58
           M  +     +    L     R +IIS NIANA T G       +    +    +E     
Sbjct: 1   MINMFDKIDLYKKALDWAWKRNEIISNNIANADTPGYKAKDLNFEAYLQRSLNQEEGLQL 60

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETN 108
                + I    S           +      +    V++  E   + + +
Sbjct: 61  FTTNERHIKESSSPDNSIEVLDSSLQMR---LDQNTVDIEQEMGKLLQNS 107


>gi|294508671|ref|YP_003572730.1| flagellar hook associated protein 1 [Salinibacter ruber M8]
 gi|294345000|emb|CBH25778.1| flagellar hook associated protein 1 [Salinibacter ruber M8]
          Length = 465

 Score = 33.7 bits (75), Expect = 8.9,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 27/71 (38%)

Query: 8  AHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
            I ++ L     ++   S+NIANA + G          ++++   +   +G   V   G
Sbjct: 7  FDIGSTSLRAVGEKIDATSQNIANAESEGYRRRRVSLSSRSVAATGLYASNGAQDVTSSG 66

Query: 68 VDQSTFVEEFD 78
          V    F    D
Sbjct: 67 VGVEQFERVRD 77


>gi|119477956|ref|ZP_01618056.1| Flagellar basal body protein [marine gamma proteobacterium
           HTCC2143]
 gi|119448869|gb|EAW30111.1| Flagellar basal body protein [marine gamma proteobacterium
           HTCC2143]
          Length = 134

 Score = 33.7 bits (75), Expect = 8.9,   Method: Composition-based stats.
 Identities = 16/117 (13%), Positives = 33/117 (28%)

Query: 3   YLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVR 62
               +  I    L V++ R ++++ N+ NA T         ++    S       S G+ 
Sbjct: 4   SFQNALGIHEKALHVRTMRAEVLANNLVNADTPNFKARDIDFKSALNSEMSSQSASRGMV 63

Query: 63  VKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
                                      +    V   VE +   +    + A+ Q + 
Sbjct: 64  ATNSRHIGGASQSYQPELLYRTPLQPSLDGNTVEEQVEMSRFSKNMMDFQASFQLLN 120


>gi|121997322|ref|YP_001002109.1| flagellar basal-body rod protein FlgB [Halorhodospira halophila
           SL1]
 gi|121588727|gb|ABM61307.1| flagellar basal-body rod protein FlgB [Halorhodospira halophila
           SL1]
          Length = 135

 Score = 33.7 bits (75), Expect = 8.9,   Method: Composition-based stats.
 Identities = 20/116 (17%), Positives = 39/116 (33%), Gaps = 2/116 (1%)

Query: 6   ASAHIANSGLAVQSARMQIISENIANARTTGDTP-GSDPYRRKTISFEEVMHGSGGVRVK 64
            +  +    + ++  R ++++ NIANA T G      D       + E           +
Sbjct: 7   QAFSVPEQAMRLRGERNELLASNIANADTPGYKARDMDFREAMRQASEPQPQPLQATSPQ 66

Query: 65  KIGVDQSTFVEEFDPGHPVANA-SGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
            +    S+ +   DP        +  +    V + VE A   E    Y A +  + 
Sbjct: 67  HVQPPPSSSMAAGDPKSLYREPHAASLDGNTVEMHVEQAKFAENAVNYQAAVDFLN 122


>gi|255023259|ref|ZP_05295245.1| flagellar basal body rod protein FlgG [Listeria monocytogenes FSL
           J1-208]
          Length = 251

 Score = 33.7 bits (75), Expect = 9.0,   Method: Composition-based stats.
 Identities = 13/98 (13%), Positives = 31/98 (31%), Gaps = 1/98 (1%)

Query: 30  ANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGI 89
           AN     +   +    R    F         V+  +  +  +       P       +G+
Sbjct: 147 ANGDLY-NAETNQYLGRLGTKFVSANQADSLVKDGEGRLHVNGINTMNLPAGQGIIQNGV 205

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
           ++  NV++ VE   + +  R+  A+   +     +   
Sbjct: 206 IETSNVDLGVEMVQLMDNQRMVQASKNVVNMFDKVYDK 243


>gi|213419605|ref|ZP_03352671.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Typhi str. E01-6750]
          Length = 29

 Score = 33.7 bits (75), Expect = 9.0,   Method: Composition-based stats.
 Identities = 6/29 (20%), Positives = 12/29 (41%)

Query: 103 DMRETNRLYMANLQTIKQSHDMMTTTLDL 131
           +M +  R Y  N + +  +  M+     L
Sbjct: 1   NMIQVQRAYEINSKAVSTTDQMLQKLTQL 29


>gi|327193031|gb|EGE59943.1| flagellar basal-body rod protein [Rhizobium etli CNPAF512]
          Length = 244

 Score = 33.7 bits (75), Expect = 9.1,   Method: Composition-based stats.
 Identities = 9/54 (16%), Positives = 23/54 (42%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG 57
          + +  +++ S       R+  I++N+AN  TTG       +     + +  ++ 
Sbjct: 1  MQSGLYVSLSSQMALEKRLNTIADNMANVNTTGFRATEVKFDEMVAATKNKLNT 54


>gi|325274804|ref|ZP_08140831.1| flagellar basal body rod protein FlgC [Pseudomonas sp. TJI-51]
 gi|324100049|gb|EGB97868.1| flagellar basal body rod protein FlgC [Pseudomonas sp. TJI-51]
          Length = 38

 Score = 33.7 bits (75), Expect = 9.2,   Method: Composition-based stats.
 Identities = 13/36 (36%), Positives = 21/36 (58%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGD 37
            L +  +IA SG++ Q+ R+  ++ NIANA T   
Sbjct: 3  MSLSSVFNIAGSGMSAQNTRLNTVASNIANAETVSS 38


>gi|256014918|ref|YP_003104927.1| flagellar basal-body rod protein FlgF [Brucella microti CCM 4915]
 gi|255997578|gb|ACU49265.1| flagellar basal-body rod protein FlgF [Brucella microti CCM 4915]
          Length = 243

 Score = 33.7 bits (75), Expect = 9.2,   Method: Composition-based stats.
 Identities = 13/88 (14%), Positives = 24/88 (27%)

Query: 6  ASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKK 65
           S ++  S L     RM  I+ N+AN  T G       +                     
Sbjct: 4  NSIYVGLSSLITLERRMDAIAHNVANVSTVGFRGEGTKFDTIVSDKASDDVSFATAGKSY 63

Query: 66 IGVDQSTFVEEFDPGHPVANASGIVKYP 93
          I  +    ++  +P          + + 
Sbjct: 64 IRTEAGPLIKTDNPLDVAVKGDAWMSFS 91


>gi|298530765|ref|ZP_07018167.1| protein of unknown function DUF1078 domain protein
           [Desulfonatronospira thiodismutans ASO3-1]
 gi|298510139|gb|EFI34043.1| protein of unknown function DUF1078 domain protein
           [Desulfonatronospira thiodismutans ASO3-1]
          Length = 124

 Score = 33.7 bits (75), Expect = 9.2,   Method: Composition-based stats.
 Identities = 23/125 (18%), Positives = 43/125 (34%), Gaps = 8/125 (6%)

Query: 11  ANSGLAVQS---ARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIG 67
           + SG+        R Q  + N+AN  T G  P      R  +       G   + V+K+ 
Sbjct: 4   SISGMGAFQSFGLRQQASAHNVANVNTRGFEP-----SRVVLEEAPEHQGVRPLSVEKVR 58

Query: 68  VDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
                   E             ++  N +++ E   M++    Y A+    +   DM+  
Sbjct: 59  DQALEHAREMQEDEAARVQEQALRPSNTDLISELVVMQQNEAAYAASAAATRTQSDMLGH 118

Query: 128 TLDLL 132
            +D+ 
Sbjct: 119 VMDMK 123


>gi|218673219|ref|ZP_03522888.1| flagellar basal body rod protein FlgF [Rhizobium etli GR56]
          Length = 244

 Score = 33.7 bits (75), Expect = 9.2,   Method: Composition-based stats.
 Identities = 9/54 (16%), Positives = 23/54 (42%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG 57
          + +  +++ S       R+  I++N+AN  TTG       +     + +  ++ 
Sbjct: 1  MQSGLYVSLSSQMALEKRLNTIADNMANVNTTGFRATEVKFDEMVAATKNKLNT 54


>gi|119899021|ref|YP_934234.1| flagellar hook-filament junction protein 1 [Azoarcus sp. BH72]
 gi|119671434|emb|CAL95347.1| flagellar hook-filament junction protein 1 [Azoarcus sp. BH72]
          Length = 663

 Score = 33.7 bits (75), Expect = 9.2,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 16/43 (37%)

Query: 91  KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
               VN+  E A++      Y +  + +  +  +    L + R
Sbjct: 621 ALSGVNLDEEAANLVRYQMAYQSAARVMNVAQTLFDELLAIGR 663


>gi|89056665|ref|YP_512116.1| flagellar hook-associated protein FlgK [Jannaschia sp. CCS1]
 gi|88866214|gb|ABD57091.1| flagellar hook-associated protein FlgK putative [Jannaschia sp.
          CCS1]
          Length = 487

 Score = 33.7 bits (75), Expect = 9.2,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 30/71 (42%), Gaps = 7/71 (9%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            + ++   A SGL   +    I+S N+ANA T G       Y  + +       G+ G 
Sbjct: 1  MSISSTLSSALSGLTASARAADIVSSNLANAMTEG-------YAVRRLDLAARQTGNDGA 53

Query: 62 RVKKIGVDQST 72
           V+ +GV +  
Sbjct: 54 GVRIVGVTRQE 64


>gi|23009955|ref|ZP_00050813.1| COG1815: Flagellar basal body protein [Magnetospirillum
           magnetotacticum MS-1]
          Length = 138

 Score = 33.7 bits (75), Expect = 9.2,   Method: Composition-based stats.
 Identities = 21/110 (19%), Positives = 33/110 (30%), Gaps = 5/110 (4%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGS--DPYRRKTISFEEVMHGSGGVRVKKIGVDQST 72
           +    AR  +++EN+ANA   G  P    +P R        +    GG  + +       
Sbjct: 16  MQWHQARQALLAENVANADMPGFRPRDLAEPSRSSAGLAAPLGAAIGGDGLARTDTRHIG 75

Query: 73  FVEEFDPGHPVANASGIVKYP---NVNVLVETADMRETNRLYMANLQTIK 119
              E  P        G    P    VN+  E     +    Y       +
Sbjct: 76  LSAESGPNADPRRFKGFEVRPSGNGVNLEEEMMKAGDNQSDYQLVASLYQ 125


>gi|332531619|ref|ZP_08407516.1| flagellar basal-body rod protein FlgF [Hylemonella gracilis ATCC
          19624]
 gi|332038982|gb|EGI75411.1| flagellar basal-body rod protein FlgF [Hylemonella gracilis ATCC
          19624]
          Length = 246

 Score = 33.7 bits (75), Expect = 9.3,   Method: Composition-based stats.
 Identities = 13/85 (15%), Positives = 21/85 (24%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
          +    + A +G      R  ++S N+AN  T G       YR   +  E        +  
Sbjct: 1  MDRIIYTAMTGANAAQHRQSVLSNNLANVSTNGFRAELSTYRAVPLRGEGATTRVFALEA 60

Query: 64 KKIGVDQSTFVEEFDPGHPVANASG 88
               D                   
Sbjct: 61 TAGQRDAPGPSMRTGRDLDAMPQQS 85



 Score = 33.7 bits (75), Expect = 9.4,   Method: Composition-based stats.
 Identities = 11/63 (17%), Positives = 21/63 (33%), Gaps = 1/63 (1%)

Query: 71  STFVEEFDPGHPVANASGIV-KYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTL 129
                   P    A     V +  NVN +     M +T R +   ++ ++ +     +  
Sbjct: 180 RPVSGGQLPSDTNARMDVGVLEGSNVNAVETMVGMIQTARQFEQQMRMLQTAESDDRSAA 239

Query: 130 DLL 132
            LL
Sbjct: 240 KLL 242


>gi|253997380|ref|YP_003049444.1| flagellar basal body rod protein [Methylotenera mobilis JLW8]
 gi|253984059|gb|ACT48917.1| flagellar basal body rod protein [Methylotenera mobilis JLW8]
          Length = 99

 Score = 33.7 bits (75), Expect = 9.3,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 38/121 (31%), Gaps = 30/121 (24%)

Query: 9   HIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGV 68
            I  SG+    AR+ + + NIAN  T   T              +     GG RV  I  
Sbjct: 4   SIPLSGMNAAQARLDVAANNIANLSTDNFT---------RKEVVQADLPGGGTRVADIKS 54

Query: 69  DQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTT 128
                                      N+  +  +  +    YM NL   K ++DM+  T
Sbjct: 55  A---------------------AQAGSNLEADMVEQLQARNTYMTNLSVFKSNNDMLMGT 93

Query: 129 L 129
           +
Sbjct: 94  I 94


>gi|229172418|ref|ZP_04299977.1| Flagellar basal-body rod protein flgG [Bacillus cereus MM3]
 gi|228610889|gb|EEK68152.1| Flagellar basal-body rod protein flgG [Bacillus cereus MM3]
          Length = 257

 Score = 33.7 bits (75), Expect = 9.3,   Method: Composition-based stats.
 Identities = 9/64 (14%), Positives = 25/64 (39%), Gaps = 1/64 (1%)

Query: 71  STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT-TL 129
           +       P       + +++  NV++  E AD+    ++  A+ + +     +      
Sbjct: 194 AEGNIADLPNGVGTVKNHMLENSNVDMTKEMADLMTDQKMISASQRVMTSFDKIYEKEAN 253

Query: 130 DLLR 133
           ++LR
Sbjct: 254 EILR 257


>gi|190890357|ref|YP_001976899.1| flagellar basal-body rod protein [Rhizobium etli CIAT 652]
 gi|190695636|gb|ACE89721.1| flagellar basal-body rod protein [Rhizobium etli CIAT 652]
          Length = 244

 Score = 33.7 bits (75), Expect = 9.3,   Method: Composition-based stats.
 Identities = 9/54 (16%), Positives = 23/54 (42%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG 57
          + +  +++ S       R+  I++N+AN  TTG       +     + +  ++ 
Sbjct: 1  MQSGLYVSLSSQMALEKRLNTIADNMANVNTTGFRATEVKFDEMVAATKNKLNT 54


>gi|241203100|ref|YP_002974196.1| flagellar basal body rod protein FlgF [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240856990|gb|ACS54657.1| flagellar basal-body rod protein FlgF [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 244

 Score = 33.7 bits (75), Expect = 9.4,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 19/45 (42%)

Query: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             G ++  NVN + E   + E NR + +    ++ S D     + 
Sbjct: 194 EQGYLENSNVNAMREITQLIEVNRAFESVSSLMRDSEDSFKEAVQ 238


>gi|148976400|ref|ZP_01813106.1| flagellar hook-associated protein K [Vibrionales bacterium SWAT-3]
 gi|145964223|gb|EDK29479.1| flagellar hook-associated protein K [Vibrionales bacterium SWAT-3]
          Length = 626

 Score = 33.7 bits (75), Expect = 9.4,   Method: Composition-based stats.
 Identities = 20/122 (16%), Positives = 35/122 (28%), Gaps = 1/122 (0%)

Query: 11  ANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQ 70
           A S L  Q   +     NI+NA T G +  S                  GV V+ +    
Sbjct: 10  AQSVLTAQRQ-LNTTGHNISNANTEGYSRQSVIQGVNDPRQYGGQTYGMGVHVENVRRSW 68

Query: 71  STFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
             F            A+      N+++L        + ++     +       +  T  D
Sbjct: 69  DQFAVNELNLSTTNAANKGDTQGNLDMLSNMLSSVASKKIPENLNEWFDSVKTLADTPND 128

Query: 131 LL 132
           + 
Sbjct: 129 VG 130


>gi|220929471|ref|YP_002506380.1| flagellar basal-body rod protein FlgB [Clostridium cellulolyticum
           H10]
 gi|219999799|gb|ACL76400.1| flagellar basal-body rod protein FlgB [Clostridium cellulolyticum
           H10]
          Length = 137

 Score = 33.7 bits (75), Expect = 9.5,   Method: Composition-based stats.
 Identities = 21/120 (17%), Positives = 46/120 (38%), Gaps = 2/120 (1%)

Query: 16  AVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVE 75
           +    R ++IS+N+AN  T         + +      +     G    ++    +S  +E
Sbjct: 17  SASWTRNEVISQNLANIDTPNYKRKDVTFEQYLNDSLDSRKLEGITTDERHIPIKSKNIE 76

Query: 76  EFDPGHPVANASGIVK--YPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133
           +  P   + N+   ++    NV+V  E A + +    Y   +Q I  +   + + +   R
Sbjct: 77  KVKPEITLDNSDTSMRIDGNNVDVDSEMAYLAKNTIQYNTLIQMINSNFSRIKSVISEGR 136


>gi|329898292|ref|ZP_08272375.1| Flagellar basal-body rod protein FlgB [gamma proteobacterium
           IMCC3088]
 gi|328920857|gb|EGG28300.1| Flagellar basal-body rod protein FlgB [gamma proteobacterium
           IMCC3088]
          Length = 124

 Score = 33.7 bits (75), Expect = 9.6,   Method: Composition-based stats.
 Identities = 22/116 (18%), Positives = 43/116 (37%), Gaps = 5/116 (4%)

Query: 4   LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRV 63
           + +   +    L ++S R+Q++++NIANA T G       +++             G  V
Sbjct: 1   MNSIFGVHEQALVLKSQRLQVLAKNIANADTPGFKARDVDFKQ-----VLAAQAGFGSLV 55

Query: 64  KKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIK 119
                   T +   D        +  +    V +  E A   E    Y A+L+ ++
Sbjct: 56  TTHKRHLKTALSNQDGLVYTNPYNAGLDGNTVEISAEQAKYGEAAIEYRASLEFLQ 111


>gi|255522321|ref|ZP_05389558.1| flagellar basal body rod protein FlgG [Listeria monocytogenes FSL
           J1-175]
          Length = 107

 Score = 33.7 bits (75), Expect = 9.6,   Method: Composition-based stats.
 Identities = 14/98 (14%), Positives = 30/98 (30%), Gaps = 1/98 (1%)

Query: 30  ANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGI 89
           AN        G     R    F         V+  +  +  +       P       +G+
Sbjct: 3   ANGDLYNAETGQ-YLGRLGTKFVSANQADSLVKDGEGRLHVNGINTMNLPAGQGIIQNGV 61

Query: 90  VKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
           ++  NV++ VE   + +  R+  A+   +     +   
Sbjct: 62  IETSNVDLGVEMVQLMDNQRMVQASKNVVNMFDKVYDK 99


>gi|218461633|ref|ZP_03501724.1| flagellar basal body rod protein FlgF [Rhizobium etli Kim 5]
          Length = 244

 Score = 33.7 bits (75), Expect = 9.6,   Method: Composition-based stats.
 Identities = 9/54 (16%), Positives = 23/54 (42%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHG 57
          + +  +++ S       R+  I++N+AN  TTG       +     + +  ++ 
Sbjct: 1  MQSGLYVSLSSQMALEKRLNTIADNMANVNTTGFRATEVKFDEMVAATKNKLNT 54


>gi|190890360|ref|YP_001976902.1| flagellar basal-body rod protein [Rhizobium etli CIAT 652]
 gi|190695639|gb|ACE89724.1| flagellar basal-body rod protein [Rhizobium etli CIAT 652]
          Length = 130

 Score = 33.7 bits (75), Expect = 9.6,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 40/114 (35%), Gaps = 4/114 (3%)

Query: 19  SARMQIISENIANARTTG-DTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEF 77
           + R Q+++ NIANA T         P+       +  M  +        G D S   +  
Sbjct: 18  TIRQQVVAGNIANANTPKFRAKDVTPFDAVLDKSDITMARTNPAHFS--GNDFSETGDID 75

Query: 78  DPGHPVANASGIVKYPN-VNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
                +    GI +  N V +  E +   +  R Y  N   +   + MM  T+ 
Sbjct: 76  VKDAALDQEIGIQESGNTVGLAEELSKSGDIKRQYDLNTSLVSSFNRMMLMTVR 129


>gi|228984827|ref|ZP_04144999.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|228775025|gb|EEM23419.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
          Length = 135

 Score = 33.7 bits (75), Expect = 9.7,   Method: Composition-based stats.
 Identities = 17/121 (14%), Positives = 37/121 (30%), Gaps = 7/121 (5%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFV 74
           +     +   +S NIANA T G       +  +      +   +         + Q+  +
Sbjct: 12  MNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQMNKSSALYKNNAADLKSNPDLYQTNEM 71

Query: 75  EEFDPGHPVA-------NASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
                            +        +V+V  E  D+ + N+LY  ++  I   + +   
Sbjct: 72  HLPTVNTKNTYAKIQTKSMQTNKDGNSVDVTTEMLDLMKANQLYGISINAINTQYAINQA 131

Query: 128 T 128
            
Sbjct: 132 A 132


>gi|308063216|gb|ADO05103.1| flagellar basal-body rod protein [Helicobacter pylori Sat464]
          Length = 269

 Score = 33.7 bits (75), Expect = 9.8,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 15/39 (38%)

Query: 4  LIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSD 42
          +    + A   +  Q  R+ + S N+AN  T G      
Sbjct: 1  MQNGYYAATGAMVAQFNRLDLTSNNLANLNTNGFKRDDA 39


>gi|294084421|ref|YP_003551179.1| flagellar basal-body rod protein FlgB [Candidatus Puniceispirillum
           marinum IMCC1322]
 gi|292663994|gb|ADE39095.1| flagellar basal-body rod protein FlgB [Candidatus Puniceispirillum
           marinum IMCC1322]
          Length = 128

 Score = 33.7 bits (75), Expect = 9.8,   Method: Composition-based stats.
 Identities = 23/132 (17%), Positives = 48/132 (36%), Gaps = 8/132 (6%)

Query: 1   MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPY--RRKTISFEEVMHGS 58
           M  +     + ++ L+++S R  I++ NIANA T         +      ++    M GS
Sbjct: 1   MKGIGDYLQVHSAALSLRSKRNDILASNIANAATPNFKARDINFEDEISRVAGYGTMDGS 60

Query: 59  GGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTI 118
               ++     +   V    P +P  + +       V + VE  +  E    Y  +L  +
Sbjct: 61  DARHIRTAVNGRPDQVLYRQPLNPSLDGNT------VELNVEQMEFSENVMRYQTSLTFL 114

Query: 119 KQSHDMMTTTLD 130
                 + + + 
Sbjct: 115 NNRITGLMSAIR 126


>gi|51894116|ref|YP_076807.1| flagellar hook-associated protein [Symbiobacterium thermophilum IAM
           14863]
 gi|51857805|dbj|BAD41963.1| flagellar hook-associated protein [Symbiobacterium thermophilum IAM
           14863]
          Length = 558

 Score = 33.7 bits (75), Expect = 9.8,   Method: Composition-based stats.
 Identities = 7/37 (18%), Positives = 17/37 (45%)

Query: 94  NVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLD 130
            V++  E A M    + + A  + +    +M+ T ++
Sbjct: 519 GVSIDEEIALMTAEQKAFAAVARVLTVLDEMLQTLIN 555


>gi|254503455|ref|ZP_05115606.1| hypothetical protein SADFL11_3494 [Labrenzia alexandrii DFL-11]
 gi|222439526|gb|EEE46205.1| hypothetical protein SADFL11_3494 [Labrenzia alexandrii DFL-11]
          Length = 129

 Score = 33.7 bits (75), Expect = 9.9,   Method: Composition-based stats.
 Identities = 15/129 (11%), Positives = 32/129 (24%), Gaps = 3/129 (2%)

Query: 2   DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
             L  +     S +     R  +++ENIAN+ +                      G    
Sbjct: 1   MPLFQALK---SKMQWHQTRQGVLAENIANSDSPEFEARDVKAYSFDDHIGREAFGLTTE 57

Query: 62  RVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQS 121
           R     +                +         VN+  +   + +    + A      + 
Sbjct: 58  RTSVAHISGMIGSGIGGKAERRDSFEITPSGNAVNLEEQMMKITQNQMDFQAATTLYTKG 117

Query: 122 HDMMTTTLD 130
             ++ T L 
Sbjct: 118 LGLIRTALS 126


>gi|254464939|ref|ZP_05078350.1| flagellar hook-associated protein FlgK [Rhodobacterales bacterium
          Y4I]
 gi|206685847|gb|EDZ46329.1| flagellar hook-associated protein FlgK [Rhodobacterales bacterium
          Y4I]
          Length = 482

 Score = 33.7 bits (75), Expect = 9.9,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 31/71 (43%), Gaps = 7/71 (9%)

Query: 2  DYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGV 61
            + ++ + A +GL+      Q+++EN+ANA T G       Y R+ +       G  GV
Sbjct: 1  MSIYSALNSAMTGLSAAGRSSQVVAENLANALTPG-------YTRRVLDLNSPGAGVPGV 53

Query: 62 RVKKIGVDQST 72
          R+  +      
Sbjct: 54 RIGDVQRLNDP 64


>gi|167469720|ref|ZP_02334424.1| flagellar hook protein FlgE [Yersinia pestis FV-1]
          Length = 73

 Score = 33.7 bits (75), Expect = 9.9,   Method: Composition-based stats.
 Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 4/63 (6%)

Query: 7  SAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKI 66
              A SG+   S+ + +I  NIAN+ T+G   GS  +               GV+V  I
Sbjct: 2  GFSQAVSGMNAASSNLDVIGNNIANSATSGFKAGSVSFA----DMFAGSQTGMGVKVAGI 57

Query: 67 GVD 69
            D
Sbjct: 58 TQD 60


>gi|254294559|ref|YP_003060582.1| flagellar hook-associated protein FlgK [Hirschia baltica ATCC
           49814]
 gi|254043090|gb|ACT59885.1| flagellar hook-associated protein FlgK [Hirschia baltica ATCC
           49814]
          Length = 714

 Score = 33.3 bits (74), Expect = 10.0,   Method: Composition-based stats.
 Identities = 14/87 (16%), Positives = 28/87 (32%), Gaps = 2/87 (2%)

Query: 45  RRKTISFEEVMHGSGGVRVKKIGVDQSTFVEEFDPGHPVANASGIVKYPNVNVLVETADM 104
             +  S  +      G    +    +            VA     V+   V++  E   M
Sbjct: 629 AAQKTSINDYAARLAGAAGARATASEQALNSAETVRTEVAMRRESVEG--VSIDEELVKM 686

Query: 105 RETNRLYMANLQTIKQSHDMMTTTLDL 131
            +  + Y +  + ++ + DM  T L L
Sbjct: 687 TQYQQAYNSASRMMQAASDMFDTLLRL 713


>gi|228920454|ref|ZP_04083799.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|229178152|ref|ZP_04305523.1| Flagellar basal-body rod protein [Bacillus cereus 172560W]
 gi|228605282|gb|EEK62732.1| Flagellar basal-body rod protein [Bacillus cereus 172560W]
 gi|228839084|gb|EEM84380.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 138

 Score = 33.3 bits (74), Expect = 10.0,   Method: Composition-based stats.
 Identities = 17/121 (14%), Positives = 37/121 (30%), Gaps = 7/121 (5%)

Query: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFV 74
           +     +   +S NIANA T G       +  +      +   +         + Q+  +
Sbjct: 15  MNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQMNKSSALYKNNAADLKSNPDLYQTNEM 74

Query: 75  EEFDPGHPVA-------NASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTT 127
                            +        +V+V  E  D+ + N+LY  ++  I   + +   
Sbjct: 75  HLPTVNTKNTYAKIQTKSMQTNKDGNSVDVTTEMLDLMKANQLYGISVNAINTQYAINQA 134

Query: 128 T 128
            
Sbjct: 135 A 135


  Database: nr
    Posted date:  May 22, 2011 12:22 AM
  Number of letters in database: 999,999,966
  Number of sequences in database:  2,987,313
  
  Database: /data/usr2/db/fasta/nr.01
    Posted date:  May 22, 2011 12:30 AM
  Number of letters in database: 999,999,796
  Number of sequences in database:  2,903,041
  
  Database: /data/usr2/db/fasta/nr.02
    Posted date:  May 22, 2011 12:36 AM
  Number of letters in database: 999,999,281
  Number of sequences in database:  2,904,016
  
  Database: /data/usr2/db/fasta/nr.03
    Posted date:  May 22, 2011 12:41 AM
  Number of letters in database: 999,999,960
  Number of sequences in database:  2,935,328
  
  Database: /data/usr2/db/fasta/nr.04
    Posted date:  May 22, 2011 12:46 AM
  Number of letters in database: 842,794,627
  Number of sequences in database:  2,394,679
  
Lambda     K      H
   0.307    0.117    0.314 

Lambda     K      H
   0.267   0.0356    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 844,898,512
Number of Sequences: 14124377
Number of extensions: 19860911
Number of successful extensions: 102074
Number of sequences better than 10.0: 6401
Number of HSP's better than 10.0 without gapping: 5759
Number of HSP's successfully gapped in prelim test: 642
Number of HSP's that attempted gapping in prelim test: 90753
Number of HSP's gapped (non-prelim): 10786
length of query: 134
length of database: 4,842,793,630
effective HSP length: 99
effective length of query: 35
effective length of database: 3,444,480,307
effective search space: 120556810745
effective search space used: 120556810745
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.2 bits)
S2: 75 (33.7 bits)