HHsearch alignment for GI: 254780381 and conserved domain: COG1749
>COG1749 FlgE Flagellar hook protein FlgE [Cell motility and secretion].
Probab=97.57 E-value=2.1e-05 Score=48.01 Aligned_cols=43 Identities=21% Similarity=0.227 Sum_probs=39.9
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 6447652008999999999999999999999999999999636
Q gi|254780381|r 87 VQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVR 129 (130)
Q Consensus 87 ~~~dgn~Vdl~~Em~~~~~~~~~Y~a~~~~~~~~~~~~~~al~ 129 (130)
T Consensus 378 gaLE~SNVDls~EltnmIvaQR~YqANsK~i~T~D~mlq~lvn 420 (423)
T COG1749 378 GALEMSNVDLAKELTNLIVAQRGYQANAKVITTSDQMLQTLVN 420 (423)
T ss_pred CCCEECCCHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHH
T ss_conf 6332112118999999888665044455068605899999986