HHsearch alignment for GI: 254780381 and conserved domain: PRK05680

>PRK05680 flgB flagellar basal body rod protein FlgB; Reviewed.
Probab=100.00  E-value=1.9e-35  Score=207.99  Aligned_cols=123  Identities=26%  Similarity=0.398  Sum_probs=103.2

Q ss_pred             CHH-HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH---------HCCCCCCCCCCCCCCCCC
Q ss_conf             601-4899999999999999999996310013777653322105676654432---------113466511345666555
Q gi|254780381|r    2 QPI-TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFL---------MARTHETHLKESDSSGLH   71 (130)
Q Consensus         2 ~~~-~~f~~~~~~l~~~~~R~~via~NIANadTPgYk~~dv~~F~~~l~~~~~---------~~~~~~~~~~~~~~~~~~   71 (130)
T Consensus         3 ~~~~~~~~~l~~aLd~~~~Rq~via~NIANadTPgYKa~dv-~Fe~~L~~a~~~~~~~~~~~l~~T~~~Hi~~~~~~~--   79 (137)
T PRK05680          3 DSFDKALGFQQEALNLRAQRQEVIANNIANADTPGYKARDI-DFESVLAKAMSGRQSGGGLALARTSERHIPAQATTS--   79 (137)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC-CHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC--
T ss_conf             48999999999999999999999986020268999886627-799999999842566677654557833247777888--


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             55576777765887764476520089999999999999999999999999999996369
Q gi|254780381|r   72 WNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVRG  130 (130)
Q Consensus        72 ~~~~~~~~~~~~~~~~~~dgn~Vdl~~Em~~~~~~~~~Y~a~~~~~~~~~~~~~~al~G  130 (130)
T Consensus        80 ---~~~~~~~~~~~~~~~DGN~Vdle~Em~~~a~N~l~Y~a~~~~l~~~~~~l~~aI~g  135 (137)
T PRK05680         80 ---SKAELLYRDPHQPSNDGNTVDMDVERTEFAKNSLMYQALLTALNGKFKGLMSVLQG  135 (137)
T ss_pred             ---CCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             ---87632442798647899860879999999999999999999999999999999865