HHsearch alignment for GI: 254780381 and conserved domain: PRK05841
>PRK05841 flgE flagellar hook protein FlgE; Validated.
Probab=98.57 E-value=3.9e-08 Score=62.54 Aligned_cols=43 Identities=28% Similarity=0.313 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 99999999999999999631001377765332210567665443
Q gi|254780381|r 9 IASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNF 52 (130)
Q Consensus 9 ~~~~~l~~~~~R~~via~NIANadTPgYk~~dv~~F~~~l~~~~ 52 (130)
T Consensus 7 sGVSGL~a~~~~ldvIgNNIANvnT~GfK~sr~-~F~dl~sq~~ 49 (605)
T PRK05841 7 NAYSGIKTHQFGIDSLSNNIANVNTLGYRSNDP-EFKTLFSSHL 49 (605)
T ss_pred HHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCC-CHHHHHHHHH
T ss_conf 999999998754423302434167621155535-3787665430