HHsearch alignment for GI: 254780381 and conserved domain: PRK06665
>PRK06665 flgK flagellar hook-associated protein FlgK; Validated.
Probab=98.46 E-value=1.7e-07 Score=59.12 Aligned_cols=44 Identities=20% Similarity=0.318 Sum_probs=37.2
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
Q ss_conf 601489999999999999999999631001377765332210567
Q gi|254780381|r 2 QPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFET 46 (130)
Q Consensus 2 ~~~~~f~~~~~~l~~~~~R~~via~NIANadTPgYk~~dv~~F~~ 46 (130)
T Consensus 3 s~F~~L~ig~sgL~a~Q~aL~ttg~NIANvnT~GYsRQ~v~-~~a 46 (628)
T PRK06665 3 STFSGIEIGKRSLFAHKQAMQTTGHNISNASKPGYSRQRVT-MKT 46 (628)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEE-EEC
T ss_conf 52426999999999999999988576641799880521766-412