HHsearch alignment for GI: 254780381 and conserved domain: PRK06797

>PRK06797 flgB flagellar basal body rod protein FlgB; Reviewed.
Probab=100.00  E-value=1.7e-34  Score=202.90  Aligned_cols=118  Identities=25%  Similarity=0.399  Sum_probs=97.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH--------------HHCCCCCCCCCCCCCCCC
Q ss_conf             489999999999999999999631001377765332210567665443--------------211346651134566655
Q gi|254780381|r    5 TFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNF--------------LMARTHETHLKESDSSGL   70 (130)
Q Consensus         5 ~~f~~~~~~l~~~~~R~~via~NIANadTPgYk~~dv~~F~~~l~~~~--------------~~~~~~~~~~~~~~~~~~   70 (130)
T Consensus         3 ~~~~~~g~~Ld~r~~Rq~viAsNIANadTPgYKarDv-~Fe~~L~~a~~~~~~~~~~~~~~~~l~~T~~~Hl~~~~~~~~   81 (135)
T PRK06797          3 DLVSDVGHYMNYLVTKRNTVSSNIANANTPGYKAQDV-TFAEQMNKSSALYKSNAADLKSNPDLYQTNEMHLPTVNTKNT   81 (135)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC-CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCCC
T ss_conf             2899999998899999999986102478999864338-799999998876530111235677635477655688778887


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             555576777765887764476520089999999999999999999999999999996369
Q gi|254780381|r   71 HWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVRG  130 (130)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~dgn~Vdl~~Em~~~~~~~~~Y~a~~~~~~~~~~~~~~al~G  130 (130)
T Consensus        82 ~~~------~~~~~~~~~~DGNtVD~d~Em~~~a~N~l~Yqas~~~Ln~k~s-l~~AirG  134 (135)
T PRK06797         82 YAK------IQTKSMQTNKDGNSVDVTTEMLDLMKANQLYGISINAINTQYA-INQAARG  134 (135)
T ss_pred             CCE------EECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCH-HHHHHCC
T ss_conf             743------6558998489997557899999999999999999999825541-8888647