HHsearch alignment for GI: 254780381 and conserved domain: PRK07521
>PRK07521 flgK flagellar hook-associated protein FlgK; Validated.
Probab=98.84 E-value=3.1e-09 Score=68.34 Aligned_cols=42 Identities=33% Similarity=0.372 Sum_probs=38.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 960148999999999999999999963100137776533221
Q gi|254780381|r 1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDIS 42 (130)
Q Consensus 1 m~~~~~f~~~~~~l~~~~~R~~via~NIANadTPgYk~~dv~ 42 (130)
T Consensus 1 Msl~s~lnia~sgL~a~Q~al~vtg~NIANanT~GYsRQ~v~ 42 (482)
T PRK07521 1 MSLSSALNTAQSGLTATSRQTSVVSRNIANALTPGYSRRTAS 42 (482)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEE
T ss_conf 976789999999999999999988563530799882413778