HHsearch alignment for GI: 254780381 and conserved domain: PRK08471
>PRK08471 flgK flagellar hook-associated protein FlgK; Validated.
Probab=98.58 E-value=5.7e-08 Score=61.64 Aligned_cols=41 Identities=15% Similarity=0.146 Sum_probs=35.8
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 60148999999999999999999963100137776533221
Q gi|254780381|r 2 QPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDIS 42 (130)
Q Consensus 2 ~~~~~f~~~~~~l~~~~~R~~via~NIANadTPgYk~~dv~ 42 (130)
T Consensus 3 s~fs~Lnia~sGL~a~Q~aL~vtg~NIANanT~GYsRQ~v~ 43 (612)
T PRK08471 3 GIFSSLNTGYTGLQAHQVQVSVTGNNISNASSEFYTRQRVV 43 (612)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEE
T ss_conf 05658999999999999999998676740789981501677