HHsearch alignment for GI: 254780381 and conserved domain: PRK12619

>PRK12619 flgB flagellar basal body rod protein FlgB; Provisional.
Probab=100.00  E-value=2e-33  Score=197.20  Aligned_cols=120  Identities=20%  Similarity=0.352  Sum_probs=101.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH-----HCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             014899999999999999999996310013777653322105676654432-----113466511345666555555767
Q gi|254780381|r    3 PITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETILNQNFL-----MARTHETHLKESDSSGLHWNAHVI   77 (130)
Q Consensus         3 ~~~~f~~~~~~l~~~~~R~~via~NIANadTPgYk~~dv~~F~~~l~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~   77 (130)
T Consensus         5 ~d~~~gi~~~aL~~r~~Rq~via~NIANadTPgYKakdv-~Fe~~L~~a~~~~~~~l~~t~~~Hi~~~~~-------~~~   76 (130)
T PRK12619          5 LDSYFGIHAKALIARDQRASVLANNIANVNTPNFKARDV-DFNEVLTATMAGNSQQLRVTSDQHINTNAD-------FMT   76 (130)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC-CHHHHHHHHHCCCCCCCCCCCCCCCCCCCC-------CCC
T ss_conf             887866779999999999999986232168999864448-899999998736876654478020478777-------666


Q ss_pred             CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             77765887764476520089999999999999999999999999999996369
Q gi|254780381|r   78 EAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVRG  130 (130)
Q Consensus        78 ~~~~~~~~~~~~dgn~Vdl~~Em~~~~~~~~~Y~a~~~~~~~~~~~~~~al~G  130 (130)
T Consensus        77 ~~~~r~~~~~~~DGNtVDid~Ema~~a~N~l~Yqa~~~~l~~k~~~l~~aIkG  129 (130)
T PRK12619         77 HLKYRMTHHASLDGNTVDKDMETTEFARNALNYQASLSFLNGKIKSMLTALKG  129 (130)
T ss_pred             CCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             51012688768999742579999999999999999999999999999998658