HHsearch alignment for GI: 254780381 and conserved domain: PRK12643

>PRK12643 flgF flagellar basal body rod protein FlgF; Reviewed.
Probab=98.57  E-value=4.3e-08  Score=62.29  Aligned_cols=44  Identities=32%  Similarity=0.429  Sum_probs=34.3

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH
Q ss_conf             96014899999999999999999996310013777653322105676
Q gi|254780381|r    1 MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETI   47 (130)
Q Consensus         1 m~~~~~f~~~~~~l~~~~~R~~via~NIANadTPgYk~~dv~~F~~~   47 (130)
T Consensus         1 Mdr~iY--tA~sg~~~~~~~~~viaNNLANvnT~GFK~~~-~~~~~~   44 (209)
T PRK12643          1 MDHAIY--TAMGAARQSLELQAVTANNLANASTPGFRAQL-AAMRAV   44 (209)
T ss_pred             CCHHHH--HHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCH-HHHHCC
T ss_conf             926899--99999999999888998887747876443104-534231