HHsearch alignment for GI: 254780381 and conserved domain: PRK12715
>PRK12715 flgK flagellar hook-associated protein FlgK; Provisional.
Probab=98.58 E-value=4.4e-08 Score=62.25 Aligned_cols=42 Identities=26% Similarity=0.392 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
Q ss_conf 1489999999999999999999631001377765332210567
Q gi|254780381|r 4 ITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFET 46 (130)
Q Consensus 4 ~~~f~~~~~~l~~~~~R~~via~NIANadTPgYk~~dv~~F~~ 46 (130)
T Consensus 1 ~sllnig~sgL~a~Q~al~vt~~NIAN~nT~GYsRq~v~-~~~ 42 (649)
T PRK12715 1 MSILNIAYSGLNAFQRALDVTGNNIANFKTRGYSRQSIQ-FTP 42 (649)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE-EEC
T ss_conf 976889999999999999887052552689980414666-422