HHsearch alignment of GI: 254780381 and MMDB domain: 1ucu_A_1-40_455-494

>1ucu_A (A:1-40,A:455-494) Phase 1 flagellin; flagellar filament, cryo-electron microscopy, helical reconstruction, structural protein; 4.00A {Salmonella typhimurium}
Probab=90.07  E-value=0.94  Score=22.84  Aligned_cols=38  Identities=13%  Similarity=0.198  Sum_probs=34.3

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             52008999999999999999999999999999999636
Q gi|254780381|r   92 NTVGITNELYKSGHIKYLYELNTKLIKKLNSMVMHVVR  129 (130)
Q Consensus        92 n~Vdl~~Em~~~~~~~~~Y~a~~~~~~~~~~~~~~al~  129 (130)
                      -.+|+..||+++.+.++..|+...++.....+=+.+++
T Consensus        40 ADaD~A~E~~~~tk~qIL~Qa~~amLaQAN~~pq~vl~   77 (80)
T 1ucu_A           40 ADSDYATEVSNMSRAQILQQAGTSVLAQANQVPQNVLS   77 (80)
T ss_dssp             SCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
T ss_conf             21319999999999999999999999997416789998