BLAST/PSIBLAST alignment of GI: 254780381 and GI: 116250479 at iteration 1
>gi|116250479|ref|YP_766317.1| flagellar basal body rod protein FlgB [Rhizobium leguminosarum bv. viciae 3841] Length = 130
>gi|115255127|emb|CAK06201.1| putative flagellar basal-body rod protein [Rhizobium leguminosarum bv. viciae 3841] Length = 130
 Score =  131 bits (330), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 66/130 (50%), Positives = 87/130 (66%), Gaps = 2/130 (1%)

Query: 1   MQPITFFQIASQHANWLSERQKIVSENIANASTPNYRAKDISSFETIL-NQNFLMARTHE 59
           MQPI  F +AS+ A WL+ RQ++V+ NIANA+TP +RAKD++ F+ +L N N  MART+ 
Sbjct: 1   MQPIQLFDLASRQAEWLTIRQQVVAGNIANANTPKFRAKDVTPFDAVLDNSNINMARTNP 60

Query: 60  THLKESDSSGLHWNAHVIEAPLDQTTGVQVSGNTVGITNELYKSGHIKYLYELNTKLIKK 119
            HL  +D S    +  V +A LDQ  GVQ SGNTVG+  EL KSG IK  Y+LNT L+  
Sbjct: 61  AHLSGNDFSD-SGDIDVKDAALDQEIGVQESGNTVGLAEELSKSGDIKRQYDLNTSLVSS 119

Query: 120 LNSMVMHVVR 129
            N M++  VR
Sbjct: 120 FNRMMLMTVR 129