HHsearch alignment for GI: 254780382 and conserved domain: COG1200

Probab=95.53  E-value=0.0068  Score=37.54  Aligned_cols=87  Identities=18%  Similarity=0.353  Sum_probs=67.4

Q ss_pred             HHHHHHCCCCCCCCCEEEEEECCC----CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEHHHH-H
Q ss_conf             444321012234565067762134----43222222222233222223454203332344442013552388884664-6
Q gi|254780382|r  232 CALLQQLLQSQDTMKNGIIFCNQK----KNVVNLCHSLEKQGFSVCAIHGNIDQRSRMKILSNFKEGTIQLMVASDLA-A  306 (465)
Q Consensus       232 ~~~l~~l~~~~~~~~k~iIF~~t~----~~~~~l~~~L~~~g~~v~~lhg~l~~~~R~~~~~~F~~g~~~vLV~Td~~-~  306 (465)
T Consensus       298 vVA~laml~ai~~G~Q~ALMAPTEILA~QH~~~~~~~l~~~~i~V~lLtG~~kgk~r~~~l~~l~~G~~~ivVGTHALiQ  377 (677)
T COG1200         298 VVALLAMLAAIEAGYQAALMAPTEILAEQHYESLRKWLEPLGIRVALLTGSLKGKARKEILEQLASGEIDIVVGTHALIQ  377 (677)
T ss_pred             HHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHCCCCCEEEECCHHHH
T ss_conf             99999999998728816886637999999999999876651974898644665067999999874799897997221220


Q ss_pred             HHHCCCCCCEEE
Q ss_conf             440788765002
Q gi|254780382|r  307 RGLDIPDVGHVF  318 (465)
Q Consensus       307 ~GiDip~v~~VI  318 (465)
T Consensus       378 d~V~F~~LgLVI  389 (677)
T COG1200         378 DKVEFHNLGLVI  389 (677)
T ss_pred             CCEEECCEEEEE
T ss_conf             450442023899