HHsearch alignment for GI: 254780382 and conserved domain: COG1484
>COG1484 DnaC DNA replication protein [DNA replication, recombination, and repair].
Probab=94.23 E-value=0.16 Score=28.62 Aligned_cols=69 Identities=14% Similarity=0.198 Sum_probs=39.4
Q ss_pred HCCCCCCCHHHHHHHHHHH-------CCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHH
Q ss_conf 7879878989999999997-------699799982798517899999999998606521478279998285899999999
Q gi|254780382|r 18 DAGYVKPTPIQIKTIPLVL-------QRHDVCGIAQTGTGKTASFVLPMLTILEKGRARVRMPRTLILEPTRELAAQVAD 90 (465)
Q Consensus 18 ~~~~~~pt~iQ~~~i~~~l-------~g~dvi~~apTGsGKT~~~~lp~l~~l~~~~~~~~~~~~lil~PtreLa~Qi~~ 90 (465)
T Consensus 78 ~~d~~~~~~~~~~~l~~~~~~~~~~~~~~nl~l~G~~G~GKthLa~-Ai~~~l~~-----~g~s-v~f~~~~el~~~Lk~ 150 (254)
T COG1484 78 EFDFEFQPGIDKKALEDLASLVEFFERGENLVLLGPPGVGKTHLAI-AIGNELLK-----AGIS-VLFITAPDLLSKLKA 150 (254)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHH-HHHHHHHH-----CCCE-EEEEEHHHHHHHHHH
T ss_conf 3023588556699999999999873258828998999987999999-99999998-----3984-999885999999999
Q ss_pred HHH
Q ss_conf 987
Q gi|254780382|r 91 NFE 93 (465)
Q Consensus 91 ~~~ 93 (465)
T Consensus 151 ~~~ 153 (254)
T COG1484 151 AFD 153 (254)
T ss_pred HHH
T ss_conf 874