HHsearch alignment for GI: 254780382 and conserved domain: COG3587
>COG3587 Restriction endonuclease [Defense mechanisms].
Probab=97.97 E-value=7.4e-06 Score=56.66 Aligned_cols=73 Identities=18% Similarity=0.308 Sum_probs=54.3
Q ss_pred CCCEEEEEHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHCCCCC--CCCEEE-----------EEEECHHHHHHHHHH
Q ss_conf 5523888846646440788765002002467789988752102458--885399-----------997788899999999
Q gi|254780382|r 294 GTIQLMVASDLAARGLDIPDVGHVFNFDVPNRAENYIHRIGRTGRA--GRHGKA-----------FTLVAKEDIKHIDAI 360 (465)
Q Consensus 294 g~~~vLV~Td~~~~GiDip~v~~VI~~d~P~~~~~y~hR~GR~gR~--g~~G~~-----------i~~~~~~d~~~~~~i 360 (465)
T Consensus 482 ~plRFIFS~waLrEGWDNPNVFtIckL~~S~SeiSK~QeVGRGLRLaVNe~G~RV~~~~~~~n~L~vlv~~sek~Fv~~L 561 (985)
T COG3587 482 EPLRFIFSKWALREGWDNPNVFTICKLRSSGSEISKLQEVGRGLRLAVNENGERVTKDFDFPNELTVLVNESEKDFVKAL 561 (985)
T ss_pred CCCEEEEEHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHCCCEEEEECCCCCEECCCCCCCCEEEEEECCCHHHHHHHH
T ss_conf 85001222657761378998368998648876047888863451532345666001121454326998163179999999
Q ss_pred HHHHCC
Q ss_conf 999623
Q gi|254780382|r 361 EKLIEK 366 (465)
Q Consensus 361 ~~~~~~ 366 (465)
T Consensus 562 qkEI~~ 567 (985)
T COG3587 562 QKEIND 567 (985)
T ss_pred HHHHHH
T ss_conf 999877