HHsearch alignment for GI: 254780382 and conserved domain: PRK00149
>PRK00149 dnaA chromosomal replication initiation protein; Reviewed.
Probab=94.27 E-value=0.11 Score=29.70 Aligned_cols=121 Identities=16% Similarity=0.262 Sum_probs=53.7
Q ss_pred EEECCCHHHHHHHHHHHHH-HCCCCCCCCCCCCCCCCCCCCC-------CCCCC--HHHHHHCCCCHHHH----HHHCCC
Q ss_conf 9982858999999999874-1023332210000122222222-------22210--11221022102333----320000
Q gi|254780382|r 76 LILEPTRELAAQVADNFEK-YGKNYNLTVALLIGGIPFEAQN-------KKLER--GADVLICTPGRILD----HFNRGK 141 (465)
Q Consensus 76 lil~PtreLa~Qi~~~~~~-~~~~~~l~~~~~~gg~~~~~~~-------~~l~~--~~~IiV~TP~rl~~----~l~~~~ 141 (465)
T Consensus 121 FVvG~sN~lA~aAA~~Va~~pg~--~yNPLfIyG~~GlGKTHLl~AIgn~~~~~~p~~~v~Y~tae~F~~~~v~al~~~~ 198 (447)
T PRK00149 121 FVVGKSNRLAHAAALAVAENPGK--AYNPLFIYGGVGLGKTHLLHAIGNYILEKNPNAKVVYVSSEKFTNDFVKALRNNA 198 (447)
T ss_pred CEECCCCHHHHHHHHHHHHCCCC--CCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHCCC
T ss_conf 22269859999999999837676--7785589779988788999999999998589972899549999999999985186
Q ss_pred C-----CCCCCEEECCCCCCCCCCCC-CHHHHHHHHH-HHCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 0-----01210010255100000001-0035788754-31022222333432112222111122
Q gi|254780382|r 142 L-----LMNNIEILVIDEADRMLDMG-FIPYIQNITS-LVPFTRQTLLFSATMTDELQKVSENF 198 (465)
Q Consensus 142 ~-----~l~~~~~lViDEah~l~~~g-f~~~i~~i~~-~~~~~~q~i~~SAT~~~~v~~l~~~~ 198 (465)
T Consensus 199 ~~~Fr~~yr~~DvLliDDiqfl~gk~~tqeeff~~fn~l~~~~kqiv~tsd~~P~~l~~l~~rL 262 (447)
T PRK00149 199 MEEFKEKYRSVDVLLIDDIQFLAGKEKTQEEFFHTFNALHENNKQIVITSDRPPKELEGLEDRL 262 (447)
T ss_pred HHHHHHHHHCCCEEEECHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHCCCCCHHH
T ss_conf 9999999972885432148886055779999999999999849968995788967656511778