HHsearch alignment for GI: 254780382 and conserved domain: PRK02362

>PRK02362 ski2-like helicase; Provisional.
Probab=100.00  E-value=0  Score=362.26  Aligned_cols=337  Identities=20%  Similarity=0.302  Sum_probs=245.0

Q ss_pred             CCHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHH-HHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEC
Q ss_conf             9843669888999999978798789899999999-976997999827985178999999999986065214782799982
Q gi|254780382|r    1 MDFADLGLSPKVVCAVLDAGYVKPTPIQIKTIPL-VLQRHDVCGIAQTGTGKTASFVLPMLTILEKGRARVRMPRTLILE   79 (465)
Q Consensus         1 ~~f~~l~l~~~l~~~l~~~~~~~pt~iQ~~~i~~-~l~g~dvi~~apTGsGKT~~~~lp~l~~l~~~~~~~~~~~~lil~   79 (465)
T Consensus         1 m~i~~l~LP~~~~~~~~~~gI~~Lyp~Q~eal~~gl~~g~NlvvsaPTgsGKTlvAElail~~l~~g------~k~vYi~   74 (736)
T PRK02362          1 MKIADLPLPDGVIDFYEGSGIEELYPPQAEAVEAGLLEGKNLLAAIPTASGKTLLAELAMLKAIAEG------GKALYIV   74 (736)
T ss_pred             CCHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHC------CEEEEEC
T ss_conf             9633239998999999976997578999999986435698189979999858999999999999839------9799985


Q ss_pred             CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHCCCCCCCCCEEECCCCCCCCC
Q ss_conf             85899999999987410233322100001222222222221011221022102333320000001210010255100000
Q gi|254780382|r   80 PTRELAAQVADNFEKYGKNYNLTVALLIGGIPFEAQNKKLERGADVLICTPGRILDHFNRGKLLMNNIEILVIDEADRML  159 (465)
Q Consensus        80 PtreLa~Qi~~~~~~~~~~~~l~~~~~~gg~~~~~~~~~l~~~~~IiV~TP~rl~~~l~~~~~~l~~~~~lViDEah~l~  159 (465)
T Consensus        75 P~kALa~EK~~~~~~~~-~~gi~V~~~tGd~~~~~~--~l-~~~dIiV~T~EK~dsl~r~~~~~l~~v~lVViDEiHli~  150 (736)
T PRK02362         75 PLRALASEKFEEFSEFS-ELGLRVGISTGDYDRRDE--YL-GRNDIIVATSEKTDSLLRNGAPWIDDISCVVADEVHLID  150 (736)
T ss_pred             CHHHHHHHHHHHHHHHH-CCCCEEEEEECCCCCCHH--HC-CCCCEEEECHHHHHHHHHCCCHHHHCCCEEEEECCEEEC
T ss_conf             87999999999999874-579989998089887831--43-689999999799999984481676508989981767866


Q ss_pred             CCCCHHHHHHHHH---HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-----CCCCC-----
Q ss_conf             0010035788754---3102222233343211222211112222210013444321234642111-----11222-----
Q gi|254780382|r  160 DMGFIPYIQNITS---LVPFTRQTLLFSATMTDELQKVSENFLQNPKRIEVNTPSSTAETIEHCF-----VATYA-----  226 (465)
Q Consensus       160 ~~gf~~~i~~i~~---~~~~~~q~i~~SAT~~~~v~~l~~~~l~~~~~i~v~~~~~~~~~i~~~~-----~~~~~-----  226 (465)
T Consensus       151 d~~RG~~lE~~lskl~~~~~~iqiIgLSATl~N~-~~la~WL-~a~~-~~--s~~RPV-~L~~~v~~~~~~~~~~~~~~~  224 (736)
T PRK02362        151 SPNRGPTLEVTLAKLRRLNPDMQVIALSATIGNA-DELAAWL-DAEL-VD--SEWRPV-DLREGVFYGGAIHFKDTEREL  224 (736)
T ss_pred             CCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCH-HHHHHHH-CCCC-CC--CCCCCC-CCEEEEEECCEECCCCCCCHH
T ss_conf             8872499999999997338774389862455899-9999983-8862-15--898886-755656507701035100300


Q ss_pred             CCCHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCC------------------------------------CC
Q ss_conf             211024443210122345650677621344322222222223------------------------------------32
Q gi|254780382|r  227 QYSKKCALLQQLLQSQDTMKNGIIFCNQKKNVVNLCHSLEKQ------------------------------------GF  270 (465)
Q Consensus       227 ~~~~k~~~l~~l~~~~~~~~k~iIF~~t~~~~~~l~~~L~~~------------------------------------g~  270 (465)
T Consensus       225 ~~~~~~~~~~l~~~~~~~~~~~LVF~~SR~~~e~~A~~la~~~~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~L~~~l~~  304 (736)
T PRK02362        225 EVPSKDEDLNLVLDTLDEGGQCLVFVSSRRNAEAFAKRAASALKKALSAEEREALAGIAEEIREVSETDTSKVLADCVRS  304 (736)
T ss_pred             CCCCCCHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHC
T ss_conf             02564058999999997399069998249999999999987524215756688999999999734442035999999960


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEHHHHHHHHCCCCCCEEEE----EC-----CCCCHHHHHHHHHCCCCCC-
Q ss_conf             2222345420333234444201355238888466464407887650020----02-----4677899887521024588-
Q gi|254780382|r  271 SVCAIHGNIDQRSRMKILSNFKEGTIQLMVASDLAARGLDIPDVGHVFN----FD-----VPNRAENYIHRIGRTGRAG-  340 (465)
Q Consensus       271 ~v~~lhg~l~~~~R~~~~~~F~~g~~~vLV~Td~~~~GiDip~v~~VI~----~d-----~P~~~~~y~hR~GR~gR~g-  340 (465)
T Consensus       305 GVafHHAGL~~~~R~lVE~~Fr~g~Ikvl~aTsTLA~GVNLPAr~VIi~~~~~~~~~~g~~~l~~~e~~QM~GRAGRpg~  384 (736)
T PRK02362        305 GAAFHHAGLSREHRELVEEGFRDGLIKVISSTPTLAAGLNLPARRVIIRDYRRYDSGAGMQPIPVLEYHQMAGRAGRPRL  384 (736)
T ss_pred             CEEEECCCCCHHHHHHHHHHHHCCCCCEEEECCHHHCCCCCCEEEEEEECCEEECCCCCCEECCHHHHHHHHHHCCCCCC
T ss_conf             94851599998999999999987998389725166505578526999804367369888336889999999852489988


Q ss_pred             -CCEEEEEEECHHH
Q ss_conf             -8539999778889
Q gi|254780382|r  341 -RHGKAFTLVAKED  353 (465)
Q Consensus       341 -~~G~~i~~~~~~d  353 (465)
T Consensus       385 D~~G~aili~~~~~  398 (736)
T PRK02362        385 DPYGEAVLLAKSYD  398 (736)
T ss_pred             CCCCEEEEEECCHH
T ss_conf             98862999967827