HHsearch alignment for GI: 254780382 and conserved domain: PRK05580

>PRK05580 primosome assembly protein PriA; Validated.
Probab=96.37  E-value=0.0025  Score=40.32  Aligned_cols=77  Identities=12%  Similarity=0.179  Sum_probs=50.1

Q ss_pred             CCCCCEEEEEECCCCCCCCCCCCCCC-CCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEHHHHHHHHCCCCCCEEEE
Q ss_conf             34565067762134432222222222-3322222345420333234444201355238888466464407887650020
Q gi|254780382|r  242 QDTMKNGIIFCNQKKNVVNLCHSLEK-QGFSVCAIHGNIDQRSRMKILSNFKEGTIQLMVASDLAARGLDIPDVGHVFN  319 (465)
Q Consensus       242 ~~~~~k~iIF~~t~~~~~~l~~~L~~-~g~~v~~lhg~l~~~~R~~~~~~F~~g~~~vLV~Td~~~~GiDip~v~~VI~  319 (465)
T Consensus       211 l~~GkqvLiLvPEI~lt~q~~~rl~~~fg~~v~v~HS~ls~~eR~~~w~~i~~G~~~IVIGtRSAv-FaP~~nLgLIIV  288 (699)
T PRK05580        211 LAQGKQALVLVPEIALTPQLLARFRARFGARVAVLHSGLSDGERYRAWLAALRGEARVVIGTRSAL-FAPFKNLGLIIV  288 (699)
T ss_pred             HHCCCCEEEEECCHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCEE-ECCCCCCCEEEE
T ss_conf             973997899917678789999999987099579964889857999999999769971999736011-065789848999