HHsearch alignment for GI: 254780382 and conserved domain: PRK05707
>PRK05707 DNA polymerase III subunit delta'; Validated.
Probab=95.36 E-value=0.13 Score=29.24 Aligned_cols=135 Identities=11% Similarity=0.004 Sum_probs=60.3
Q ss_pred CCCHHHHHHHHHHHC-CC---CEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHC--
Q ss_conf 789899999999976-99---799982798517899999999998606521478279998285899999999987410--
Q gi|254780382|r 23 KPTPIQIKTIPLVLQ-RH---DVCGIAQTGTGKTASFVLPMLTILEKGRARVRMPRTLILEPTRELAAQVADNFEKYG-- 96 (465)
Q Consensus 23 ~pt~iQ~~~i~~~l~-g~---dvi~~apTGsGKT~~~~lp~l~~l~~~~~~~~~~~~lil~PtreLa~Qi~~~~~~~~-- 96 (465)
T Consensus 3 ~~yPW~~~~w~~l~~~~rl~HA~Lf~G~~G~GK~~l-A~~~A~~LlC~~~~~~~~-----Cg~-------C~sC~~~~~~ 69 (328)
T PRK05707 3 EIYPWQQSLWQQLAGRGRHAHAYLLHGPAGIGKRAL-AERLAAFLLCEAPQGGGA-----CGS-------CKGCQLLAAG 69 (328)
T ss_pred CCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCHHHH-HHHHHHHHHCCCCCCCCC-----CCC-------CHHHHHHHCC
T ss_conf 676674899999997798220464479998679999-999999984899999899-----988-------8899998758
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHCC
Q ss_conf 23332210000122222222222101122102210233332000000121001025510000000100357887543102
Q gi|254780382|r 97 KNYNLTVALLIGGIPFEAQNKKLERGADVLICTPGRILDHFNRGKLLMNNIEILVIDEADRMLDMGFIPYIQNITSLVPF 176 (465)
Q Consensus 97 ~~~~l~~~~~~gg~~~~~~~~~l~~~~~IiV~TP~rl~~~l~~~~~~l~~~~~lViDEah~l~~~gf~~~i~~i~~~~~~ 176 (465)
T Consensus 70 ~HPD~~~i~pe~~------~~------~I~IdqIR~l~~~~~~~~-~~g~~KV~iI~~Ae~m~~~A-aNALLKtLEEPp~ 135 (328)
T PRK05707 70 SHPDNFVLEPEEA------DK------PIKVDQVRELVSFVVQTA-QLGGRKVVLIEPAEAMNRNA-ANALLKSLEEPSG 135 (328)
T ss_pred CCCCEEEEECCCC------CC------CCCHHHHHHHHHHHHHCC-CCCCCEEEEEEHHHHHCHHH-HHHHHHHHHCCCC
T ss_conf 9998799842666------77------697999999999983176-67895799950287738999-9999998507898
Q ss_pred CCCCCCCC
Q ss_conf 22223334
Q gi|254780382|r 177 TRQTLLFS 184 (465)
Q Consensus 177 ~~q~i~~S 184 (465)
T Consensus 136 ~t~fiL~t 143 (328)
T PRK05707 136 QTVLLLIS 143 (328)
T ss_pred CEEEEEEE
T ss_conf 75999860