HHsearch alignment for GI: 254780382 and conserved domain: PRK05707

>PRK05707 DNA polymerase III subunit delta'; Validated.
Probab=95.36  E-value=0.13  Score=29.24  Aligned_cols=135  Identities=11%  Similarity=0.004  Sum_probs=60.3

Q ss_pred             CCCHHHHHHHHHHHC-CC---CEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHC--
Q ss_conf             789899999999976-99---799982798517899999999998606521478279998285899999999987410--
Q gi|254780382|r   23 KPTPIQIKTIPLVLQ-RH---DVCGIAQTGTGKTASFVLPMLTILEKGRARVRMPRTLILEPTRELAAQVADNFEKYG--   96 (465)
Q Consensus        23 ~pt~iQ~~~i~~~l~-g~---dvi~~apTGsGKT~~~~lp~l~~l~~~~~~~~~~~~lil~PtreLa~Qi~~~~~~~~--   96 (465)
T Consensus         3 ~~yPW~~~~w~~l~~~~rl~HA~Lf~G~~G~GK~~l-A~~~A~~LlC~~~~~~~~-----Cg~-------C~sC~~~~~~   69 (328)
T PRK05707          3 EIYPWQQSLWQQLAGRGRHAHAYLLHGPAGIGKRAL-AERLAAFLLCEAPQGGGA-----CGS-------CKGCQLLAAG   69 (328)
T ss_pred             CCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCHHHH-HHHHHHHHHCCCCCCCCC-----CCC-------CHHHHHHHCC
T ss_conf             676674899999997798220464479998679999-999999984899999899-----988-------8899998758


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHCC
Q ss_conf             23332210000122222222222101122102210233332000000121001025510000000100357887543102
Q gi|254780382|r   97 KNYNLTVALLIGGIPFEAQNKKLERGADVLICTPGRILDHFNRGKLLMNNIEILVIDEADRMLDMGFIPYIQNITSLVPF  176 (465)
Q Consensus        97 ~~~~l~~~~~~gg~~~~~~~~~l~~~~~IiV~TP~rl~~~l~~~~~~l~~~~~lViDEah~l~~~gf~~~i~~i~~~~~~  176 (465)
T Consensus        70 ~HPD~~~i~pe~~------~~------~I~IdqIR~l~~~~~~~~-~~g~~KV~iI~~Ae~m~~~A-aNALLKtLEEPp~  135 (328)
T PRK05707         70 SHPDNFVLEPEEA------DK------PIKVDQVRELVSFVVQTA-QLGGRKVVLIEPAEAMNRNA-ANALLKSLEEPSG  135 (328)
T ss_pred             CCCCEEEEECCCC------CC------CCCHHHHHHHHHHHHHCC-CCCCCEEEEEEHHHHHCHHH-HHHHHHHHHCCCC
T ss_conf             9998799842666------77------697999999999983176-67895799950287738999-9999998507898


Q ss_pred             CCCCCCCC
Q ss_conf             22223334
Q gi|254780382|r  177 TRQTLLFS  184 (465)
Q Consensus       177 ~~q~i~~S  184 (465)
T Consensus       136 ~t~fiL~t  143 (328)
T PRK05707        136 QTVLLLIS  143 (328)
T ss_pred             CEEEEEEE
T ss_conf             75999860