HHsearch alignment for GI: 254780382 and conserved domain: PRK06995

Probab=96.78  E-value=0.012  Score=35.98  Aligned_cols=84  Identities=19%  Similarity=0.328  Sum_probs=38.2

Q ss_pred             EEECCCCCCHHHHH-HHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             99827985178999-99999998606521478279998285899999999987410233322100001222222222221
Q gi|254780382|r   42 CGIAQTGTGKTASF-VLPMLTILEKGRARVRMPRTLILEPTRELAAQVADNFEKYGKNYNLTVALLIGGIPFEAQNKKLE  120 (465)
Q Consensus        42 i~~apTGsGKT~~~-~lp~l~~l~~~~~~~~~~~~lil~PtreLa~Qi~~~~~~~~~~~~l~~~~~~gg~~~~~~~~~l~  120 (465)
T Consensus       180 alVGPTGVGKTTTiAKLAAr~~l~~g~~----kVaLIT~DTYRIgA--vEQLktYa~IlgvPv~v---------------  238 (404)
T PRK06995        180 ALVGPTGVGKTTTTAKLAARCVMRHGAS----KVALLTTDSYRIGG--HEQLRIYGKILGVPVHA---------------  238 (404)
T ss_pred             EEECCCCCCHHHHHHHHHHHHHHHHCCC----CEEEEECCCCCHHH--HHHHHHHHHHCCCEEEE---------------
T ss_conf             9866888763758999999999983898----37999768754789--99999999875955999---------------


Q ss_pred             CHHHHHHCCCCHHHHHHHCCCCCCCCCEEECCCCCC
Q ss_conf             011221022102333320000001210010255100
Q gi|254780382|r  121 RGADVLICTPGRILDHFNRGKLLMNNIEILVIDEAD  156 (465)
Q Consensus       121 ~~~~IiV~TP~rl~~~l~~~~~~l~~~~~lViDEah  156 (465)
T Consensus       239 ------v~~~~eL~~aL~~----l~~~dlILIDTaG  264 (404)
T PRK06995        239 ------VKDAADLRLALAE----LRNKHIVLIDTVG  264 (404)
T ss_pred             ------ECCHHHHHHHHHH----HCCCCEEEEECCC
T ss_conf             ------5999999999997----0899999980999