HHsearch alignment for GI: 254780382 and conserved domain: PRK07246
>PRK07246 bifunctional ATP-dependent DNA helicase/DNA polymerase III subunit epsilon; Validated.
Probab=99.85 E-value=4e-20 Score=148.69 Aligned_cols=117 Identities=15% Similarity=0.182 Sum_probs=76.7
Q ss_pred CCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEHHHHHHHHCCCC--CCEEEEEC
Q ss_conf 5650677621344322222222223322222345420333234444201355238888466464407887--65002002
Q gi|254780382|r 244 TMKNGIIFCNQKKNVVNLCHSLEKQGFSVCAIHGNIDQRSRMKILSNFKEGTIQLMVASDLAARGLDIPD--VGHVFNFD 321 (465)
Q Consensus 244 ~~~k~iIF~~t~~~~~~l~~~L~~~g~~v~~lhg~l~~~~R~~~~~~F~~g~~~vLV~Td~~~~GiDip~--v~~VI~~d 321 (465)
T Consensus 646 ~~g~~LVLFTS~~~l~~v~~~L~~~~~~~L~-Qg--~~gs~~~l~~rF~~~~~siLlGt~SFWEGVDlpG~~L~~vVI~k 722 (820)
T PRK07246 646 EGQPILVLFNSKKHLLAVSDYLDQWQVSHLA-QE--KNGTAYNIKKRFDRGEQTILLGLGSFWEGVDFIQADRMIEVITR 722 (820)
T ss_pred CCCCEEEEECHHHHHHHHHHHHHHCCCCEEE-EC--CCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEEEEEEE
T ss_conf 4999999953099999999998537997788-67--97679999999984899699976676466448998779999886
Q ss_pred CC----CCH--------------------------HHHHHHHHCCCCCC-CCEEEEEEECHH--HHHHHHHHHHHH
Q ss_conf 46----778--------------------------99887521024588-853999977888--999999999996
Q gi|254780382|r 322 VP----NRA--------------------------ENYIHRIGRTGRAG-RHGKAFTLVAKE--DIKHIDAIEKLI 364 (465)
Q Consensus 322 ~P----~~~--------------------------~~y~hR~GR~gR~g-~~G~~i~~~~~~--d~~~~~~i~~~~ 364 (465)
T Consensus 723 LPF~~P~dPl~~a~~~~l~~~G~npF~~~~LP~AvlrlkQg~GRLIRs~~DrGvvv-IlD~Rl~tk~YGk~fl~sL 797 (820)
T PRK07246 723 LPFDNPEDPFVKKMSQYLLEEGKNPFYDYFLPMTILRLKQAIGRTMRREDQKSAVI-ILDRRLLTKSYGQVILESL 797 (820)
T ss_pred CCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEE-EECCCCCCCHHHHHHHHHC
T ss_conf 99999980999999999998289952562299999999995703676799868999-9888655786789999868