HHsearch alignment for GI: 254780382 and conserved domain: PRK08727

Probab=94.84  E-value=0.1  Score=29.98  Aligned_cols=52  Identities=21%  Similarity=0.268  Sum_probs=25.1

Q ss_pred             CCHHHCCCCHHHHHHHHHCCC-CCCCHHHHHHHHHHHCCC--C-EEEECCCCCCHHH
Q ss_conf             984366988899999997879-878989999999997699--7-9998279851789
Q gi|254780382|r    1 MDFADLGLSPKVVCAVLDAGY-VKPTPIQIKTIPLVLQRH--D-VCGIAQTGTGKTA   53 (465)
Q Consensus         1 ~~f~~l~l~~~l~~~l~~~~~-~~pt~iQ~~~i~~~l~g~--d-vi~~apTGsGKT~   53 (465)
T Consensus         1 m~~~QLpL~l~~~~~~tfdnFi~~~n~-~~a~l~~~~~~~~~~~lyl~G~~GsGKTH   56 (233)
T PRK08727          1 MSVPQLPLALRAPSDQRFDSYIAAPDG-LLAQLQALAAGQSSDWLYLSGPAGTGKTH   56 (233)
T ss_pred             CCCCCCCCCCCCCCCCCHHHCCCCCHH-HHHHHHHHHCCCCCCEEEEECCCCCCHHH
T ss_conf             980104788999972242120678559-99999987438888989998999998899