HHsearch alignment for GI: 254780382 and conserved domain: PRK09111
>PRK09111 DNA polymerase III subunits gamma and tau; Validated.
Probab=92.58 E-value=0.15 Score=28.85 Aligned_cols=99 Identities=15% Similarity=0.147 Sum_probs=42.8
Q ss_pred CEEEECCCCCCHHHHHHHHHHHHHHCCCC-CCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 79998279851789999999999860652-14782799982858999999999874102333221000012222222222
Q gi|254780382|r 40 DVCGIAQTGTGKTASFVLPMLTILEKGRA-RVRMPRTLILEPTRELAAQVADNFEKYGKNYNLTVALLIGGIPFEAQNKK 118 (465)
Q Consensus 40 dvi~~apTGsGKT~~~~lp~l~~l~~~~~-~~~~~~~lil~PtreLa~Qi~~~~~~~~~~~~l~~~~~~gg~~~~~~~~~ 118 (465)
T Consensus 47 a~l~~g~rg~gktt~ari~-a~~lnc~~~~~~~~~~-~~~c~~-------c~~c~~i~~~~~~d~~e~daas-------- 109 (600)
T PRK09111 47 AFMLTGVRGVGKTTTARIL-ARALNYKGPDGVGGPT-IDPCGV-------GEHCQAIMEGRHVDVIEMDAAS-------- 109 (600)
T ss_pred EEEEECCCCCCHHHHHHHH-HHHHCCCCCCCCCCCC-CCCCCC-------CHHHHHHHCCCCCCEEEEECCC--------
T ss_conf 4764578987899999999-9996698876668998-898998-------8658988668998758851554--------
Q ss_pred CCCHHHHHHCCCCHHHHHHHCCC--CCCCCCEEECCCCCCCCCCCCC
Q ss_conf 21011221022102333320000--0012100102551000000010
Q gi|254780382|r 119 LERGADVLICTPGRILDHFNRGK--LLMNNIEILVIDEADRMLDMGF 163 (465)
Q Consensus 119 l~~~~~IiV~TP~rl~~~l~~~~--~~l~~~~~lViDEah~l~~~gf 163 (465)
T Consensus 110 -~~~v~~-------~r~~~~~~~~~p~~~~~kv~iidevhmls~~af 148 (600)
T PRK09111 110 -HTGVDD-------IREIIESVRYRPVSARYKVYIIDEVHMLSTAAF 148 (600)
T ss_pred -CCCHHH-------HHHHHHHHCCCCCCCCEEEEEEECCCCCCHHHH
T ss_conf -578889-------999998605388777546999600110579999