HHsearch alignment for GI: 254780382 and conserved domain: PRK09112
>PRK09112 DNA polymerase III subunit delta'; Validated.
Probab=94.67 E-value=0.16 Score=28.74 Aligned_cols=142 Identities=19% Similarity=0.190 Sum_probs=57.4
Q ss_pred HHHHHHHHH----CCC---CEEEECCCCCCHHH-HHHHHHHHHHHCCCCCCCCCE-EEEECCCHHHHHHHHHHHHHHCCC
Q ss_conf 999999997----699---79998279851789-999999999860652147827-999828589999999998741023
Q gi|254780382|r 28 QIKTIPLVL----QRH---DVCGIAQTGTGKTA-SFVLPMLTILEKGRARVRMPR-TLILEPTRELAAQVADNFEKYGKN 98 (465)
Q Consensus 28 Q~~~i~~~l----~g~---dvi~~apTGsGKT~-~~~lp~l~~l~~~~~~~~~~~-~lil~PtreLa~Qi~~~~~~~~~~ 98 (465)
T Consensus 28 q~~~~~~L~~a~~~gRl~HA~Lf~GP~GiGKaTlA~~~A--~~Ll~~~~~~~~~~~~~~pd~~~~~~r~i~~-----g~h 100 (352)
T PRK09112 28 HEEARAFLAQAYREGRLHHALLFEGPEGIGKATLAFHLA--NHILSHPDPNEAPETLADPDPASPLWRQIAQ-----GAH 100 (352)
T ss_pred HHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHH--HHHHCCCCCCCCCCCCCCCCCCCHHHHHHHC-----CCC
T ss_conf 699999999999849965246535899808999999999--9986699866686556788878778999974-----899
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHCCCC
Q ss_conf 33221000012222222222210112210221023333200000012100102551000000010035788754310222
Q gi|254780382|r 99 YNLTVALLIGGIPFEAQNKKLERGADVLICTPGRILDHFNRGKLLMNNIEILVIDEADRMLDMGFIPYIQNITSLVPFTR 178 (465)
Q Consensus 99 ~~l~~~~~~gg~~~~~~~~~l~~~~~IiV~TP~rl~~~l~~~~~~l~~~~~lViDEah~l~~~gf~~~i~~i~~~~~~~~ 178 (465)
T Consensus 101 pdl~--~i~r~~d--~k~~~~~~--~I~vd~iR~l~~~~~~~~-~~~~~kv~Iid~ad~m~~~a-aNALLK~LEEPp~~~ 172 (352)
T PRK09112 101 PNLL--HLTRPFD--EKTGKFKT--AITVDEIRRVTHFLSQTS-GDGNWRIVIIDPADDMNRNA-ANAILKTLEEPPARA 172 (352)
T ss_pred CCEE--EEECCCC--HHHHHHHC--CCCHHHHHHHHHHHCCCC-CCCCEEEEEECCHHHHHHHH-HHHHHHHHHCCCCCE
T ss_conf 9956--5534322--02145433--577799999999845488-66880699981878746999-999999853489874
Q ss_pred CCCCCC
Q ss_conf 223334
Q gi|254780382|r 179 QTLLFS 184 (465)
Q Consensus 179 q~i~~S 184 (465)
T Consensus 173 ~fiLit 178 (352)
T PRK09112 173 LFILIS 178 (352)
T ss_pred EEEEEE
T ss_conf 899886