HHsearch alignment for GI: 254780382 and conserved domain: PRK09112

>PRK09112 DNA polymerase III subunit delta'; Validated.
Probab=94.67  E-value=0.16  Score=28.74  Aligned_cols=142  Identities=19%  Similarity=0.190  Sum_probs=57.4

Q ss_pred             HHHHHHHHH----CCC---CEEEECCCCCCHHH-HHHHHHHHHHHCCCCCCCCCE-EEEECCCHHHHHHHHHHHHHHCCC
Q ss_conf             999999997----699---79998279851789-999999999860652147827-999828589999999998741023
Q gi|254780382|r   28 QIKTIPLVL----QRH---DVCGIAQTGTGKTA-SFVLPMLTILEKGRARVRMPR-TLILEPTRELAAQVADNFEKYGKN   98 (465)
Q Consensus        28 Q~~~i~~~l----~g~---dvi~~apTGsGKT~-~~~lp~l~~l~~~~~~~~~~~-~lil~PtreLa~Qi~~~~~~~~~~   98 (465)
T Consensus        28 q~~~~~~L~~a~~~gRl~HA~Lf~GP~GiGKaTlA~~~A--~~Ll~~~~~~~~~~~~~~pd~~~~~~r~i~~-----g~h  100 (352)
T PRK09112         28 HEEARAFLAQAYREGRLHHALLFEGPEGIGKATLAFHLA--NHILSHPDPNEAPETLADPDPASPLWRQIAQ-----GAH  100 (352)
T ss_pred             HHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHH--HHHHCCCCCCCCCCCCCCCCCCCHHHHHHHC-----CCC
T ss_conf             699999999999849965246535899808999999999--9986699866686556788878778999974-----899


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHCCCC
Q ss_conf             33221000012222222222210112210221023333200000012100102551000000010035788754310222
Q gi|254780382|r   99 YNLTVALLIGGIPFEAQNKKLERGADVLICTPGRILDHFNRGKLLMNNIEILVIDEADRMLDMGFIPYIQNITSLVPFTR  178 (465)
Q Consensus        99 ~~l~~~~~~gg~~~~~~~~~l~~~~~IiV~TP~rl~~~l~~~~~~l~~~~~lViDEah~l~~~gf~~~i~~i~~~~~~~~  178 (465)
T Consensus       101 pdl~--~i~r~~d--~k~~~~~~--~I~vd~iR~l~~~~~~~~-~~~~~kv~Iid~ad~m~~~a-aNALLK~LEEPp~~~  172 (352)
T PRK09112        101 PNLL--HLTRPFD--EKTGKFKT--AITVDEIRRVTHFLSQTS-GDGNWRIVIIDPADDMNRNA-ANAILKTLEEPPARA  172 (352)
T ss_pred             CCEE--EEECCCC--HHHHHHHC--CCCHHHHHHHHHHHCCCC-CCCCEEEEEECCHHHHHHHH-HHHHHHHHHCCCCCE
T ss_conf             9956--5534322--02145433--577799999999845488-66880699981878746999-999999853489874


Q ss_pred             CCCCCC
Q ss_conf             223334
Q gi|254780382|r  179 QTLLFS  184 (465)
Q Consensus       179 q~i~~S  184 (465)
T Consensus       173 ~fiLit  178 (352)
T PRK09112        173 LFILIS  178 (352)
T ss_pred             EEEEEE
T ss_conf             899886