HHsearch alignment for GI: 254780382 and conserved domain: PRK09302
>PRK09302 circadian clock protein KaiC; Reviewed.
Probab=93.30 E-value=0.2 Score=28.12 Aligned_cols=55 Identities=22% Similarity=0.278 Sum_probs=31.2
Q ss_pred CCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCC
Q ss_conf 6997999827985178999999999986065214782799982858999999999874102
Q gi|254780382|r 37 QRHDVCGIAQTGTGKTASFVLPMLTILEKGRARVRMPRTLILEPTRELAAQVADNFEKYGK 97 (465)
Q Consensus 37 ~g~dvi~~apTGsGKT~~~~lp~l~~l~~~~~~~~~~~~lil~PtreLa~Qi~~~~~~~~~ 97 (465)
T Consensus 23 ~g~~~LV~G~pGsGKTt-l---a~QfL~~Ga~~-~GE~~lyit-l~E~~~~l~~~~~~~g~ 77 (501)
T PRK09302 23 KGRPTLVSGTAGTGKTL-F---ALQFLHNGIKS-FGEPGVFVT-FEESPEDIIRNVASFGW 77 (501)
T ss_pred CCCEEEEEECCCCCHHH-H---HHHHHHHHHHH-CCCCEEEEE-CCCCHHHHHHHHHHCCC
T ss_conf 99779998389999999-9---99999999885-599789998-57999999999998499