HHsearch alignment for GI: 254780382 and conserved domain: PRK12422
>PRK12422 chromosomal replication initiation protein; Provisional.
Probab=91.99 E-value=0.47 Score=25.68 Aligned_cols=123 Identities=15% Similarity=0.281 Sum_probs=58.1
Q ss_pred EEECCCHHHHHHHHHHHHH-HCCC--CCCCCCCCCCCCCCCCCC------CC-CCCHHHHHHCCCCHHHH----HHHCCC
Q ss_conf 9982858999999999874-1023--332210000122222222------22-21011221022102333----320000
Q gi|254780382|r 76 LILEPTRELAAQVADNFEK-YGKN--YNLTVALLIGGIPFEAQN------KK-LERGADVLICTPGRILD----HFNRGK 141 (465)
Q Consensus 76 lil~PtreLa~Qi~~~~~~-~~~~--~~l~~~~~~gg~~~~~~~------~~-l~~~~~IiV~TP~rl~~----~l~~~~ 141 (465)
T Consensus 113 FVvG~~N~lA~~aa~~va~~~~~~~g~~yNPLfIyG~~GlGKTHLL~AIgn~i~~~~~kV~Yvtae~F~~~~v~ai~~~~ 192 (455)
T PRK12422 113 FLVTPENDLPFRILQEFAKVSEQGKGFPFNPIYLFGPEGSGKTHLMQAAVSALRESGGKILYVSSELFTEHLVSAIRSGE 192 (455)
T ss_pred EEECCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHCCC
T ss_conf 33158609999999999837553588767875887899997899999999985379986999749999999999997588
Q ss_pred C-----CCCCCEEECCCCCCCCCCCC-CHHHHHHHHH-HHCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 0-----01210010255100000001-0035788754-31022222333432112222111122
Q gi|254780382|r 142 L-----LMNNIEILVIDEADRMLDMG-FIPYIQNITS-LVPFTRQTLLFSATMTDELQKVSENF 198 (465)
Q Consensus 142 ~-----~l~~~~~lViDEah~l~~~g-f~~~i~~i~~-~~~~~~q~i~~SAT~~~~v~~l~~~~ 198 (465)
T Consensus 193 ~~~Fr~~yr~~DvLLIDDIQfl~gK~~tqeEff~tfN~L~~~~KQIVitsDr~P~el~~l~~RL 256 (455)
T PRK12422 193 MQRFRSFYRNVDALFIEDIEVFSGKGATQEEFFHTFNSLHTEGKLIVISSSYAPGDLKAMEERL 256 (455)
T ss_pred HHHHHHHHHCCCEEEEEHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHH
T ss_conf 9999999963887763147887284889999999999999859969996898957651268999