HHsearch alignment for GI: 254780382 and conserved domain: PRK13104
>PRK13104 secA preprotein translocase subunit SecA; Reviewed.
Probab=99.81 E-value=1.4e-18 Score=138.67 Aligned_cols=322 Identities=17% Similarity=0.225 Sum_probs=185.0
Q ss_pred CCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCC
Q ss_conf 87987898999999999769979998279851789999999999860652147827999828589999999998741023
Q gi|254780382|r 19 AGYVKPTPIQIKTIPLVLQRHDVCGIAQTGTGKTASFVLPMLTILEKGRARVRMPRTLILEPTRELAAQVADNFEKYGKN 98 (465)
Q Consensus 19 ~~~~~pt~iQ~~~i~~~l~g~dvi~~apTGsGKT~~~~lp~l~~l~~~~~~~~~~~~lil~PtreLa~Qi~~~~~~~~~~ 98 (465)
T Consensus 79 lg~r-~~dvQl~gg~~lh~g~--iaEM~TGEGKTL~atlp~ylnal~g~------gvhvvTvNdYLA~RDae~m~~~y~~ 149 (896)
T PRK13104 79 LGLR-HFDVQLIGGMVLHEGN--IAEMRTGEGKTLVATLPAYLNAISGR------GVHIVTVNDYLAKRDSQWMKPIYEF 149 (896)
T ss_pred CCCC-CCHHHHHHHHHHHCCC--EEEECCCCCHHHHHHHHHHHHHHCCC------CEEEECCCHHHHHHHHHHHHHHHHH
T ss_conf 3897-6479999899984585--14651788559999999999875599------7199726535446449999999998
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHH-HHHHHCCC------CCCCCCEEECCCCCCCCC-CCC--------
Q ss_conf 33221000012222222222210112210221023-33320000------001210010255100000-001--------
Q gi|254780382|r 99 YNLTVALLIGGIPFEAQNKKLERGADVLICTPGRI-LDHFNRGK------LLMNNIEILVIDEADRML-DMG-------- 162 (465)
Q Consensus 99 ~~l~~~~~~gg~~~~~~~~~l~~~~~IiV~TP~rl-~~~l~~~~------~~l~~~~~lViDEah~l~-~~g-------- 162 (465)
T Consensus 150 lGltvg~i~~~~~~~~--r~~aY~~DitY~Tn~e~gFDyLrDnm~~~~~~~vqr~~~~aivDEvDSiLiDEArtPLiisg 227 (896)
T PRK13104 150 LGLTVGVIYPDMSHKE--KQEAYKADIVYGTNNEYGFDYLRDNMAFSLTDKVQRELNFAIVDEVDSILIDEARTPLIISG 227 (896)
T ss_pred HCCEEEEECCCCCHHH--HHHHHCCCEEEECCCCCCCCCCCCCHHCCHHHHCCCCCCEEEEECHHHHHHHCCCCCEEECC
T ss_conf 1976734189999799--99971499379678654152357211138476256677647874223543213568747527
Q ss_pred -------CHHHHHHHHHHHCC--------------CCCCCCCCCC--------------C-C-CC------------CCC
Q ss_conf -------00357887543102--------------2222333432--------------1-1-22------------221
Q gi|254780382|r 163 -------FIPYIQNITSLVPF--------------TRQTLLFSAT--------------M-T-DE------------LQK 193 (465)
Q Consensus 163 -------f~~~i~~i~~~~~~--------------~~q~i~~SAT--------------~-~-~~------------v~~ 193 (465)
T Consensus 228 ~~~~~~~~y~~~~~~~~~l~~~~~~~~~~dy~~de~~~~v~lt~~G~~~~e~~l~~~~~~~~~~~ly~~~~~~~~~~v~~ 307 (896)
T PRK13104 228 AAEDSSELYIKINSLIPQLKKQEEEGDEGDYTIDEKQKQAHLTDAGHLHIEELLTKAKLLDPGESLYHASNIMLMHHVNA 307 (896)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 88764489999999999998622116777779874776456835467999999745213577665355134589987889
Q ss_pred -CC-C-CCCCCCCC------------------------------------CCCCCCCCCCCCCC-CCC------------
Q ss_conf -11-1-22222100------------------------------------13444321234642-111------------
Q gi|254780382|r 194 -VS-E-NFLQNPKR------------------------------------IEVNTPSSTAETIE-HCF------------ 221 (465)
Q Consensus 194 -l~-~-~~l~~~~~------------------------------------i~v~~~~~~~~~i~-~~~------------ 221 (465)
T Consensus 308 al~A~~l~~~d~~YiV~d~~v~ivDe~TGR~m~grr~s~GlhQaiEaKE~v~i~~e~~t~a~iT~Qn~Fr~y~klsGMTG 387 (896)
T PRK13104 308 ALKAHAMFHRDIDYIVKDNQVVIVDEHTGRTMPGRRWSEGLHQAVEAKEGVPIQNENQTLASITFQNFFRMYNKLSGMTG 387 (896)
T ss_pred HHHHHHHHHCCCCEEEECCEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEHHHHHHHCCHHCCCCC
T ss_conf 99999999669848998894999868888778898165368999998728877888722477759998854504226756
Q ss_pred ---------------------------------CCCCCCCCHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCC
Q ss_conf ---------------------------------11222211024443210122345650677621344322222222223
Q gi|254780382|r 222 ---------------------------------VATYAQYSKKCALLQQLLQSQDTMKNGIIFCNQKKNVVNLCHSLEKQ 268 (465)
Q Consensus 222 ---------------------------------~~~~~~~~~k~~~l~~l~~~~~~~~k~iIF~~t~~~~~~l~~~L~~~ 268 (465)
T Consensus 388 Ta~te~~Ef~~iY~l~Vv~IPtn~p~~R~d~~d~vy~t~~~K~~Av~~ei~~~~~~gqPVLvGT~sve~SE~ls~~L~~~ 467 (896)
T PRK13104 388 TADTEAYEFQQIYNLEVVVIPTNRSMIRKDEADLVYLTQADKFQAIIEDVRECGVRRQPVLVGTVSIEASEFLSQLLKKE 467 (896)
T ss_pred CCHHHHHHHHHHHCCCEEECCCCCCCEEECCCCEEECCHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHC
T ss_conf 76768999999868876985899996123799869728999999999999999975997899348579899999999986
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHCCC-CCEEEEEHHHHHHHHCC---CCC------------------------------
Q ss_conf 32222234542033323444420135-52388884664644078---876------------------------------
Q gi|254780382|r 269 GFSVCAIHGNIDQRSRMKILSNFKEG-TIQLMVASDLAARGLDI---PDV------------------------------ 314 (465)
Q Consensus 269 g~~v~~lhg~l~~~~R~~~~~~F~~g-~~~vLV~Td~~~~GiDi---p~v------------------------------ 314 (465)
T Consensus 468 gi~h~VLNAk~~~~E-A~Iia~--AG~~gaVTIATNMAGRGTDI~LGg~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~v 544 (896)
T PRK13104 468 NIKHQVLNAKFHEKE-AQIIAE--AGRPGAVTIATNMAGRGTDIVLGGSLAADLANLPADASEQEKEAVKKEWQKRHDEV 544 (896)
T ss_pred CCCHHHHCCCCHHHH-HHHHHH--CCCCCCEEECCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 992465267874789-999983--38999689716556888582178751244430565511667999999999853344
Q ss_pred -----CEEEEECCCCCHHHHHHHHHCCCCCCCCEEEEEEECHHHH
Q ss_conf -----5002002467789988752102458885399997788899
Q gi|254780382|r 315 -----GHVFNFDVPNRAENYIHRIGRTGRAGRHGKAFTLVAKEDI 354 (465)
Q Consensus 315 -----~~VI~~d~P~~~~~y~hR~GR~gR~g~~G~~i~~~~~~d~ 354 (465)
T Consensus 545 ~~~GGL~VigterhesrRiD~QLrGRaGRQGDPG~s~F~lSleDd 589 (896)
T PRK13104 545 IAAGGLRIIGSERHESRRIDNQLRGRAGRQGDPGSSRFYLSLEDN 589 (896)
T ss_pred HHCCCEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCEEEEECCHH
T ss_conf 205872898604331246777860532456899863266533379