HHsearch alignment for GI: 254780382 and conserved domain: PRK13107
>PRK13107 preprotein translocase subunit SecA; Reviewed.
Probab=99.79 E-value=5.7e-18 Score=134.84 Aligned_cols=322 Identities=18% Similarity=0.237 Sum_probs=184.0
Q ss_pred CCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCC
Q ss_conf 87987898999999999769979998279851789999999999860652147827999828589999999998741023
Q gi|254780382|r 19 AGYVKPTPIQIKTIPLVLQRHDVCGIAQTGTGKTASFVLPMLTILEKGRARVRMPRTLILEPTRELAAQVADNFEKYGKN 98 (465)
Q Consensus 19 ~~~~~pt~iQ~~~i~~~l~g~dvi~~apTGsGKT~~~~lp~l~~l~~~~~~~~~~~~lil~PtreLa~Qi~~~~~~~~~~ 98 (465)
T Consensus 79 lg~r-~ydvQl~gg~~Lh~G~--iaEM~TGEGKTL~atlp~ylnal~g~------gvhvvTvNdYLA~RDae~m~~vy~~ 149 (908)
T PRK13107 79 FEMR-HFDVQLLGGMVLDSNR--IAEMRTGEGKTLTATLPAYLNALTGK------GVHVITVNDYLARRDAENNRPLFEF 149 (908)
T ss_pred CCCC-CCHHHHHHHHHHHCCC--EEEECCCCCHHHHHHHHHHHHHHCCC------CEEEECCCHHHHHHHHHHHHHHHHH
T ss_conf 3897-5479999899984695--14651788559999999999875599------7099726535547549999999998
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHH-HHHHHCCC------CCCCCCEEECCCCCCCCC-CC--------C
Q ss_conf 33221000012222222222210112210221023-33320000------001210010255100000-00--------1
Q gi|254780382|r 99 YNLTVALLIGGIPFEAQNKKLERGADVLICTPGRI-LDHFNRGK------LLMNNIEILVIDEADRML-DM--------G 162 (465)
Q Consensus 99 ~~l~~~~~~gg~~~~~~~~~l~~~~~IiV~TP~rl-~~~l~~~~------~~l~~~~~lViDEah~l~-~~--------g 162 (465)
T Consensus 150 lGlsvg~i~~~~~~~e--r~~aY~~DitY~Tn~e~gFDYLRDnm~~~~~~~vqr~~~~aivDEvDSiLIDEArtPLIISg 227 (908)
T PRK13107 150 LGLTVGINVAGLGQQE--KKAAYNADITYGTNNEFGFDYLRDNMAFSPQERVQRPLHYALIDEVDSILIDEARTPLIISG 227 (908)
T ss_pred HCCEEEECCCCCCHHH--HHHHCCCCCEEECCCCCCCCCCCCCCCCCHHHHCCCCCCEEEEECHHHHHHHCCCCCEEECC
T ss_conf 1975733179999699--99845688645357642342357430157587535677648874223543213568757517
Q ss_pred -------CHHHHHHHHHHH-C------------------CCCCCCCCCCCCCCCCC-------------CC---------
Q ss_conf -------003578875431-0------------------22222333432112222-------------11---------
Q gi|254780382|r 163 -------FIPYIQNITSLV-P------------------FTRQTLLFSATMTDELQ-------------KV--------- 194 (465)
Q Consensus 163 -------f~~~i~~i~~~~-~------------------~~~q~i~~SAT~~~~v~-------------~l--------- 194 (465)
T Consensus 228 ~~~~~~~~y~~~~~~v~~l~~~~~~~~~~~~~~~dy~~dek~~~v~lt~~G~~~~e~~~~~~~~~~~~~~ly~~~~~~~~ 307 (908)
T PRK13107 228 AAEDSSELYIKINTLIPNLIRQDKEDTEEYVGEGDYSIDEKAKQVHFTERGQEKVENLLIERGMLAEGDSLYSAANISLL 307 (908)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEEECHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
T ss_conf 88754288999999999999987642220166667688437773776051799999987656765565432670010677
Q ss_pred --------CCC-CCCCCCC------------------------------------CCCCCCCCCCCCCC-CCC-------
Q ss_conf --------112-2222100------------------------------------13444321234642-111-------
Q gi|254780382|r 195 --------SEN-FLQNPKR------------------------------------IEVNTPSSTAETIE-HCF------- 221 (465)
Q Consensus 195 --------~~~-~l~~~~~------------------------------------i~v~~~~~~~~~i~-~~~------- 221 (465)
T Consensus 308 ~~v~~aL~A~~l~~~d~dYiV~d~~v~ivDe~TGR~m~gRr~s~GLHQaiEaKE~v~i~~e~~t~A~iT~Qn~Fr~y~kl 387 (908)
T PRK13107 308 HHVNAALRAHTLFEKDVDYIVQDNEVIIVDEHTGRTMPGRRWSEGLHQAVEAKEGVHIQNENQTLASITFQNYFRQYEKL 387 (908)
T ss_pred HHHHHHHHHHHHHHCCCCEEEECCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEHHHHHHHCHHH
T ss_conf 77999999999985798689978968997478787788981652689999987499778887214777599888445152
Q ss_pred --------------------------------------CCCCCCCCHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCC
Q ss_conf --------------------------------------112222110244432101223456506776213443222222
Q gi|254780382|r 222 --------------------------------------VATYAQYSKKCALLQQLLQSQDTMKNGIIFCNQKKNVVNLCH 263 (465)
Q Consensus 222 --------------------------------------~~~~~~~~~k~~~l~~l~~~~~~~~k~iIF~~t~~~~~~l~~ 263 (465)
T Consensus 388 sGMTGTA~te~~Ef~~iY~l~Vv~iPtn~p~~R~d~~d~vy~t~~~K~~Av~~ei~~~~~~gqPVLvGT~sve~SE~ls~ 467 (908)
T PRK13107 388 AGMTGTADTEAFEFQHIYGLDTVVVPTNRPMVRKDMADLVYLTADEKYQAIIKDIKDCRERGQPVLVGTVSIEQSELLAR 467 (908)
T ss_pred CCCCCCCHHHHHHHHHHHCCCEEECCCCCCCEEEECCCEEECCHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH
T ss_conf 17756757689999998688669847999850250898697589999999999999999759988995052899999999
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC-CCEEEEEHHHHHHHHCCCC-----------------------------
Q ss_conf 2222332222234542033323444420135-5238888466464407887-----------------------------
Q gi|254780382|r 264 SLEKQGFSVCAIHGNIDQRSRMKILSNFKEG-TIQLMVASDLAARGLDIPD----------------------------- 313 (465)
Q Consensus 264 ~L~~~g~~v~~lhg~l~~~~R~~~~~~F~~g-~~~vLV~Td~~~~GiDip~----------------------------- 313 (465)
T Consensus 468 ~L~~~gi~h~VLNAk~h~~E-A~Iia~--AG~~gaVTIATNMAGRGTDI~LGGn~~~~~~~~~~~~~~~~~~~~~~~~~~ 544 (908)
T PRK13107 468 LMVKEKIPHEVLNAKFHERE-AEIVAQ--AGRTGAVTIATNMAGRGTDIVLGGNWNMEIEALENPTAEQKAKIKADWQIR 544 (908)
T ss_pred HHHHCCCCCCEECCCCHHHH-HHHHHH--CCCCCCEEEECCCCCCCCCEECCCCCHHHHHHCCCCCHHHHHHHHHHHHHH
T ss_conf 99746785301048876889-999995--499998798333678986842588620213320286487899999999886
Q ss_pred ---C-----CEEEEECCCCCHHHHHHHHHCCCCCCCCEEEEEEECHHHH
Q ss_conf ---6-----5002002467789988752102458885399997788899
Q gi|254780382|r 314 ---V-----GHVFNFDVPNRAENYIHRIGRTGRAGRHGKAFTLVAKEDI 354 (465)
Q Consensus 314 ---v-----~~VI~~d~P~~~~~y~hR~GR~gR~g~~G~~i~~~~~~d~ 354 (465)
T Consensus 545 ~~~V~~~GGL~VigterhesrRiDnQLrGRsgRQGDpG~srFflSLEDd 593 (908)
T PRK13107 545 HDEVVAAGGLHILGTERHESRRIDNQLRGRAGRQGDAGSSRFYLSMEDS 593 (908)
T ss_pred HHHHHHCCCEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCEEEEECCHH
T ss_conf 6689865980898514331246777761222357899853365313289