HHsearch alignment for GI: 254780382 and conserved domain: PRK13889

>PRK13889 conjugal transfer relaxase TraA; Provisional.
Probab=95.63  E-value=0.1  Score=29.92  Aligned_cols=70  Identities=19%  Similarity=0.075  Sum_probs=42.4

Q ss_pred             CCCCHHHHH-HHHH---CCCCCCCHHHHHHHHHHHCCCCE-EEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECC
Q ss_conf             698889999-9997---87987898999999999769979-998279851789999999999860652147827999828
Q gi|254780382|r    6 LGLSPKVVC-AVLD---AGYVKPTPIQIKTIPLVLQRHDV-CGIAQTGTGKTASFVLPMLTILEKGRARVRMPRTLILEP   80 (465)
Q Consensus         6 l~l~~~l~~-~l~~---~~~~~pt~iQ~~~i~~~l~g~dv-i~~apTGsGKT~~~~lp~l~~l~~~~~~~~~~~~lil~P   80 (465)
T Consensus       326 h~V~~~~~~~a~~~~~~~~~~-Ls~EQ~~A~~hiT~~~~iavVvG~AGtGKSt--mL~aARea----wEa~GyrV~GaAL  398 (992)
T PRK13889        326 HEVSDADREAALARAEARGLV-LSGEQADALAHVTDGRDLGVVVGYAGTGKSA--MLGVAREA----WEAAGYEVRGAAL  398 (992)
T ss_pred             CCCCHHHHHHHHHHHHHCCCC-CCHHHHHHHHHHCCCCCEEEEEECCCCCHHH--HHHHHHHH----HHHCCCEEEEECC
T ss_conf             788888999999865532688-7999999999864789758998338887889--99999999----9977988981150


Q ss_pred             CH
Q ss_conf             58
Q gi|254780382|r   81 TR   82 (465)
Q Consensus        81 tr   82 (465)
T Consensus       399 sG  400 (992)
T PRK13889        399 SG  400 (992)
T ss_pred             CH
T ss_conf             06