HHsearch alignment for GI: 254780382 and conserved domain: PTZ00110
>PTZ00110 helicase; Provisional.
Probab=92.66 E-value=0.094 Score=30.19 Aligned_cols=71 Identities=8% Similarity=0.181 Sum_probs=53.2
Q ss_pred CCEEEEEECCCCCCCCCCCCCCC----CCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEH-----HHHHHH-HCCCCC
Q ss_conf 65067762134432222222222----33222223454203332344442013552388884-----664644-078876
Q gi|254780382|r 245 MKNGIIFCNQKKNVVNLCHSLEK----QGFSVCAIHGNIDQRSRMKILSNFKEGTIQLMVAS-----DLAARG-LDIPDV 314 (465)
Q Consensus 245 ~~k~iIF~~t~~~~~~l~~~L~~----~g~~v~~lhg~l~~~~R~~~~~~F~~g~~~vLV~T-----d~~~~G-iDip~v 314 (465)
T Consensus 255 gP~aLILaPTRELA~QI~~e~~~~~~~~~ir~~~i~GG~~~~~Q~~---~L~~G-~dIvVATPGRLiDlL~~~~~~L~~v 330 (602)
T PTZ00110 255 GPIVLVLAPTRELAEQIREQALQFGRSSKLKNSVAYGGVPKRFQTY---ALRRG-VEILIACPGRLIDFLESNVTNLRRV 330 (602)
T ss_pred CCEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHH---HHCCC-CCEEEECCHHHHHHHHCCCCCCCCE
T ss_conf 9769997383999999999999971547854999979968799999---87169-9999979238999996499874310
Q ss_pred CEEEE
Q ss_conf 50020
Q gi|254780382|r 315 GHVFN 319 (465)
Q Consensus 315 ~~VI~ 319 (465)
T Consensus 331 ~yLVL 335 (602)
T PTZ00110 331 TYLVL 335 (602)
T ss_pred EEEEE
T ss_conf 28998