HHsearch alignment for GI: 254780382 and conserved domain: TIGR00631

>TIGR00631 uvrb excinuclease ABC, B subunit; InterPro: IPR004807 All proteins in this family for which functions are known are DNA helicases that function in the nucleotide excision repair and are endonucleases that make the 3' incision next to DNA damage. They are part of a pathway requiring UvrA, UvrB, UvrC, and UvrD homologs.; GO: 0009381 excinuclease ABC activity, 0006289 nucleotide-excision repair, 0005737 cytoplasm, 0009380 excinuclease repair complex.
Probab=90.65  E-value=0.099  Score=30.04  Aligned_cols=66  Identities=27%  Similarity=0.418  Sum_probs=48.7

Q ss_pred             CCHHHHHHHHHHH----CC-CCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCC
Q ss_conf             8989999999997----69-979998279851789999999999860652147827999828589999999998741023
Q gi|254780382|r   24 PTPIQIKTIPLVL----QR-HDVCGIAQTGTGKTASFVLPMLTILEKGRARVRMPRTLILEPTRELAAQVADNFEKYGKN   98 (465)
Q Consensus        24 pt~iQ~~~i~~~l----~g-~dvi~~apTGsGKT~~~~lp~l~~l~~~~~~~~~~~~lil~PtreLa~Qi~~~~~~~~~~   98 (465)
T Consensus        10 P~GDQP~AI~~L~~~l~~G~~~QtLLGvTGsGKTFT~An-VIa~~-------~rP-TLV~aHNKTLAAQLY~EfKefFPe   80 (667)
T TIGR00631        10 PAGDQPKAIAKLVEGLEAGEKEQTLLGVTGSGKTFTMAN-VIAQV-------QRP-TLVLAHNKTLAAQLYNEFKEFFPE   80 (667)
T ss_pred             CCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHH-HHHHH-------CCC-EEEECCCHHHHHHHHHHHHHHCCC
T ss_conf             678818999999999856887147853214862788989-99984-------798-499857776799999999863867