HHsearch alignment for GI: 254780382 and conserved domain: TIGR02688
>TIGR02688 TIGR02688 conserved hypothetical protein TIGR02688; InterPro: IPR014061 Members of this entry are uncharacterised proteins sporadically distributed in bacteria and archaea, about 470 amino acids in length. Several members of this family appear in public databases with annotation as ATP-dependent protease La, despite the lack of similarity to families IPR004815 from INTERPRO (ATP-dependent protease La) or IPR003111 from INTERPRO (ATP-dependent protease La (LON) domain). The proteins in this entry are encoded by genes repeatedly found downstream of another gene that encodes an uncharacterised protein of about 880 amino acids in length (see IPR014060 from INTERPRO)..
Probab=93.60 E-value=0.095 Score=30.16 Aligned_cols=19 Identities=21% Similarity=0.483 Sum_probs=8.3
Q ss_pred CCCCEEEECCCCCCHHHHH
Q ss_conf 6997999827985178999
Q gi|254780382|r 37 QRHDVCGIAQTGTGKTASF 55 (465)
Q Consensus 37 ~g~dvi~~apTGsGKT~~~ 55 (465)
T Consensus 216 ~N~Nl~ELgPk~TGKSY~Y 234 (470)
T TIGR02688 216 KNYNLVELGPKGTGKSYIY 234 (470)
T ss_pred CCCCEEEECCCCCCCCHHE
T ss_conf 8713487578887730010