HHsearch alignment for GI: 254780382 and conserved domain: cd00046
>cd00046 DEXDc DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.
Probab=99.94 E-value=1e-26 Score=191.28 Aligned_cols=144 Identities=40% Similarity=0.601 Sum_probs=121.6
Q ss_pred CCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 97999827985178999999999986065214782799982858999999999874102333221000012222222222
Q gi|254780382|r 39 HDVCGIAQTGTGKTASFVLPMLTILEKGRARVRMPRTLILEPTRELAAQVADNFEKYGKNYNLTVALLIGGIPFEAQNKK 118 (465)
Q Consensus 39 ~dvi~~apTGsGKT~~~~lp~l~~l~~~~~~~~~~~~lil~PtreLa~Qi~~~~~~~~~~~~l~~~~~~gg~~~~~~~~~ 118 (465)
T Consensus 1 ~~~lv~~ptGsGKT~~~~~~~~~~~~~~----~~~~~lil~Pt~~L~~q~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 75 (144)
T cd00046 1 RDVLLAAPTGSGKTLAALLPILELLDSL----KGGQVLVLAPTRELANQVAERLKELFGE-GIKVGYLIGGTSIKQQEKL 75 (144)
T ss_pred CCEEEECCCCCHHHHHHHHHHHHHHHHC----CCCEEEEECCHHHHHHHHHHHHHHHCCC-CCEEEEEECCCCHHHHHHH
T ss_conf 9999988997179999999999999756----8976999746799999999999997488-7179999613636778987
Q ss_pred CCCHHHHHHCCCCHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 210112210221023333200000012100102551000000010035788754310222223334321
Q gi|254780382|r 119 LERGADVLICTPGRILDHFNRGKLLMNNIEILVIDEADRMLDMGFIPYIQNITSLVPFTRQTLLFSATM 187 (465)
Q Consensus 119 l~~~~~IiV~TP~rl~~~l~~~~~~l~~~~~lViDEah~l~~~gf~~~i~~i~~~~~~~~q~i~~SAT~ 187 (465)
T Consensus 76 ~~~~~~ilv~T~~~l~~~~~~~~~~~~~~~~vViDEaH~~~~~~~~~~~~~~~~~~~~~~~~l~lSATp 144 (144)
T cd00046 76 LSGKTDIVVGTPGRLLDELERLKLSLKKLDLLILDEAHRLLNQGFGLLGLKILLKLPKDRQVLLLSATP 144 (144)
T ss_pred HCCCCCEEECCHHHHHHHHHCCCCCCCCCCEEEEECHHHHHCCCCHHHHHHHHHHCCCCCCEEEECCCC
T ss_conf 458984998288999999973876555100999988887643796999999999679999489982899