HHsearch alignment for GI: 254780382 and conserved domain: cd01131
>cd01131 PilT Pilus retraction ATPase PilT. PilT is a nucleotide binding protein responsible for the retraction of type IV pili, likely by pili disassembly. This retraction provides the force required for travel of bacteria in low water environments by a mechanism known as twitching motility.
Probab=90.21 E-value=0.61 Score=24.95 Aligned_cols=22 Identities=27% Similarity=0.492 Sum_probs=14.4
Q ss_pred EEEECCCCCCHHHHHHHHHHHHH
Q ss_conf 99982798517899999999998
Q gi|254780382|r 41 VCGIAQTGTGKTASFVLPMLTIL 63 (465)
Q Consensus 41 vi~~apTGsGKT~~~~lp~l~~l 63 (465)
T Consensus 4 iLitG~TGSGKTTt-l~all~~i 25 (198)
T cd01131 4 VLVTGPTGSGKSTT-LAAMIDYI 25 (198)
T ss_pred EEEECCCCCCHHHH-HHHHHHHH
T ss_conf 99989999979999-99999853