HHsearch alignment for GI: 254780382 and conserved domain: cd03245
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=91.80 E-value=0.21 Score=28.00 Aligned_cols=17 Identities=29% Similarity=0.493 Sum_probs=14.8
Q ss_pred CCCCEEEECCCCCCHHH
Q ss_conf 69979998279851789
Q gi|254780382|r 37 QRHDVCGIAQTGTGKTA 53 (465)
Q Consensus 37 ~g~dvi~~apTGsGKT~ 53 (465)
T Consensus 29 ~G~~v~ivG~sGsGKST 45 (220)
T cd03245 29 AGEKVAIIGRVGSGKST 45 (220)
T ss_pred CCCEEEEECCCCCHHHH
T ss_conf 99999999999985999