>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.

Probab=91.09  E-value=0.24  Score=27.54  Aligned_cols=17  Identities=24%  Similarity=0.464  Sum_probs=14.8

Q ss_pred             CCCCEEEECCCCCCHHH
Q ss_conf             69979998279851789
Q gi|254780382|r   37 QRHDVCGIAQTGTGKTA   53 (465)
Q Consensus        37 ~g~dvi~~apTGsGKT~   53 (465)
T Consensus        27 ~Ge~i~IvG~sGsGKST   43 (234)
T cd03251          27 AGETVALVGPSGSGKST   43 (234)
T ss_pred             CCCEEEEECCCCCHHHH
T ss_conf             99999999899982999