HHsearch alignment for GI: 254780382 and conserved domain: pfam02606
>pfam02606 LpxK Tetraacyldisaccharide-1-P 4'-kinase. This family consists of tetraacyldisaccharide-1-P 4'-kinase also known as Lipid-A 4'-kinase or Lipid A biosynthesis protein LpxK, EC:2.7.1.130. This enzyme catalyses the reaction: ATP + 2,3-bis(3-hydroxytetradecanoyl)-D -glucosaminyl-(beta-D-1,6)-2,3-bis(3-hydroxytetradecanoyl)-D-glu cosam inyl beta-phosphate <= ADP + 2,3,2',3'-tetrakis(3-hydroxytetradecanoyl)-D- glucosaminyl-1,6-beta-D-glucosamine 1,4'-bisphosphate. This enzyme is involved in the synthesis of lipid A portion of the bacterial lipopolysaccharide layer (LPS). The family contains a P-loop motif at the N terminus.
Probab=90.20 E-value=0.28 Score=27.18 Aligned_cols=55 Identities=20% Similarity=0.204 Sum_probs=28.1
Q ss_pred CCEEEEEECCCCCCCCCCCCCCCCCCCCCCC-----CCCCCHHHHHHHHHHHCCCCCEEEEEHH
Q ss_conf 6506776213443222222222233222223-----4542033323444420135523888846
Q gi|254780382|r 245 MKNGIIFCNQKKNVVNLCHSLEKQGFSVCAI-----HGNIDQRSRMKILSNFKEGTIQLMVASD 303 (465)
Q Consensus 245 ~~k~iIF~~t~~~~~~l~~~L~~~g~~v~~l-----hg~l~~~~R~~~~~~F~~g~~~vLV~Td 303 (465)
T Consensus 221 ~~~v~a~s-GIanP~~F~~~L~~~g~~i~~~~~f~DHh~y~~~dl~~i~~~a~~---~~iitTE 280 (318)
T pfam02606 221 GKRVLAFA-GIGNPQRFFDTLRALGLEVVATLAFPDHHPFTAADLAFLEAEAKE---PGLVTTE 280 (318)
T ss_pred CCEEEEEE-ECCCHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHCCC---CCEEECC
T ss_conf 98489999-647879999999976987878677788777999999999986569---9758741