RPSBLAST alignment for GI: 254780382 and conserved domain: TIGR01389

>gnl|CDD|130456 TIGR01389, recQ, ATP-dependent DNA helicase RecQ. The ATP-dependent DNA helicase RecQ of E. coli is about 600 residues long. This model represents bacterial proteins with a high degree of similarity in domain architecture and in primary sequence to E. coli RecQ. The model excludes eukaryotic and archaeal proteins with RecQ-like regions, as well as more distantly related bacterial helicases related to RecQ. Length = 591

 Score = 85.9 bits (213), Expect = 2e-17
 Identities = 88/353 (24%), Positives = 140/353 (39%), Gaps = 47/353 (13%)

Query: 20  GYVKPTPIQIKTIPLVLQRHDVCGIAQTGTGKTASFVLPMLTILEKGRARVRMPRTLILE 79
           GY    P Q + I  VL   DV  +  TG GK+  + +P L  L KG        T+++ 
Sbjct: 10  GYDDFRPGQEEIISHVLDGRDVLVVMPTGGGKSLCYQVPAL--LLKGL-------TVVIS 60

Query: 80  PTRELAAQVADNFEKYGKNYNLTVALLIGGIPFEAQNKKLERGA----DVLICTPGRIL- 134
           P   L     D     G       A L   +  + Q    +        +L   P R+  
Sbjct: 61  PLISLMKDQVDQLRAAGVA----AAYLNSTLSAKEQQDIEKALVNGELKLLYVAPERLEQ 116

Query: 135 DHFNRGKLLMNNIEILVIDEADRMLDMG--FIPYIQNITSLV---PFTRQTLLFSATMTD 189
           D+F    L    I ++ +DEA  +   G  F P  Q + SL    P     +  +AT   
Sbjct: 117 DYF-LNMLQRIPIALVAVDEAHCVSQWGHDFRPEYQRLGSLAERFP-QVPRIALTATADA 174

Query: 190 ELQKVSENFLQNPKRIEVNTPSSTAETIEHCFVATYA------QYSKKCALLQQLLQ--S 241
           E ++     L+                  + F+ ++          KK    + LL    
Sbjct: 175 ETRQDIRELLRLAD--------------ANEFITSFDRPNLRFSVVKKNNKQKFLLDYLK 220

Query: 242 QDTMKNGIIFCNQKKNVVNLCHSLEKQGFSVCAIHGNIDQRSRMKILSNFKEGTIQLMVA 301
           +   ++GII+ + +K V  L   LE QG S  A H  +  + R +   +F    +++MVA
Sbjct: 221 KHRGQSGIIYASSRKKVEELAERLESQGISALAYHAGLSNKVRAENQEDFLYDDVKVMVA 280

Query: 302 SDLAARGLDIPDVGHVFNFDVPNRAENYIHRIGRTGRAGRHGKAFTLVAKEDI 354
           ++    G+D P+V  V ++D+P   E+Y    GR GR G   +A  L +  DI
Sbjct: 281 TNAFGMGIDKPNVRFVIHYDMPGNLESYYQEAGRAGRDGLPAEAILLYSPADI 333