RPSBLAST alignment for GI: 254780382 and conserved domain: PRK04537
>gnl|CDD|179861 PRK04537, PRK04537, ATP-dependent RNA helicase RhlB; Provisional. Length = 572
Score = 259 bits (663), Expect = 1e-69
Identities = 138/375 (36%), Positives = 224/375 (59%), Gaps = 10/375 (2%)
Query: 1 MDFADLGLSPKVVCAVLDAGYVKPTPIQIKTIPLVLQRHDVCGIAQTGTGKTASFVLPML 60
+ F+ L P ++ + AG+ + TPIQ T+P+ L DV G AQTGTGKT +F++ ++
Sbjct: 9 LTFSSFDLHPALLAGLESAGFTRCTPIQALTLPVALPGGDVAGQAQTGTGKTLAFLVAVM 68
Query: 61 TILEKGRARVRM----PRTLILEPTRELAAQVADNFEKYGKNYNLTVALLIGGIPFEAQN 116
L A PR LIL PTRELA Q+ + K+G + L AL+ GG+ ++ Q
Sbjct: 69 NRLLSRPALADRKPEDPRALILAPTRELAIQIHKDAVKFGADLGLRFALVYGGVDYDKQR 128
Query: 117 KKLERGADVLICTPGRILDHFNRGKLL-MNNIEILVIDEADRMLDMGFIPYIQNITSLVP 175
+ L++G DV+I TPGR++D+ + K++ ++ EI V+DEADRM D+GFI I+ + +P
Sbjct: 129 ELLQQGVDVIIATPGRLIDYVKQHKVVSLHACEICVLDEADRMFDLGFIKDIRFLLRRMP 188
Query: 176 --FTRQTLLFSATMTDELQKVSENFLQNPKRIEVNTPSSTAETIEHCFVATYAQYSKKCA 233
TRQTLLFSAT++ + +++ + P+++ V T + TA + + +K
Sbjct: 189 ERGTRQTLLFSATLSHRVLELAYEHMNEPEKLVVETETITAARVRQRIY--FPADEEKQT 246
Query: 234 LLQQLLQSQDTMKNGIIFCNQKKNVVNLCHSLEKQGFSVCAIHGNIDQRSRMKILSNFKE 293
LL LL + + ++F N K V + +LE+ G+ V + G++ Q+ R +L+ F++
Sbjct: 247 LLLGLLSRSEGART-MVFVNTKAFVERVARTLERHGYRVGVLSGDVPQKKRESLLNRFQK 305
Query: 294 GTIQLMVASDLAARGLDIPDVGHVFNFDVPNRAENYIHRIGRTGRAGRHGKAFTLVAKED 353
G ++++VA+D+AARGL I V +V+N+D+P AE+Y+HRIGRT R G G A + +
Sbjct: 306 GQLEILVATDVAARGLHIDGVKYVYNYDLPFDAEDYVHRIGRTARLGEEGDAISFACERY 365
Query: 354 IKHIDAIEKLIEKKV 368
+ IE IE+K+
Sbjct: 366 AMSLPDIEAYIEQKI 380