RPSBLAST alignment for GI: 254780382 and conserved domain: PRK11192

>gnl|CDD|183029 PRK11192, PRK11192, ATP-dependent RNA helicase SrmB; Provisional. Length = 434
 Score =  314 bits (808), Expect = 2e-86
 Identities = 146/381 (38%), Positives = 211/381 (55%), Gaps = 24/381 (6%)

Query: 1   MDFADLGLSPKVVCAVLDAGYVKPTPIQIKTIPLVLQRHDVCGIAQTGTGKTASFVLPML 60
             F++L L   ++ A+ D GY +PT IQ + IP  L   DV G A TGTGKTA+F+LP L
Sbjct: 1   TTFSELELDESLLEALQDKGYTRPTAIQAEAIPPALDGRDVLGSAPTGTGKTAAFLLPAL 60

Query: 61  -TILEKGRARVRMPRTLILEPTRELAAQVADNFEKYGKNYNLTVALLIGGIPFEAQNKKL 119
             +L+  R +   PR LIL PTRELA QVAD   +  K+ +L +A + GG+ +    +  
Sbjct: 61  QHLLDFPRRKSGPPRILILTPTRELAMQVADQARELAKHTHLDIATITGGVAYMNHAEVF 120

Query: 120 ERGADVLICTPGRILDHFNRGKLLMNNIEILVIDEADRMLDMGFIPYIQNITSLVPFTRQ 179
               D+++ TPGR+L +          +E L++DEADRMLDMGF   I+ I +   + +Q
Sbjct: 121 SENQDIVVATPGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIETIAAETRWRKQ 180

Query: 180 TLLFSATMTDE-LQKVSENFLQNPKRIEVNTPSST----------AETIEHCFVATYAQY 228
           TLLFSAT+  + +Q  +E  L +P  +E                 A+ +EH         
Sbjct: 181 TLLFSATLEGDAVQDFAERLLNDPVEVEAEPSRRERKKIHQWYYRADDLEH--------- 231

Query: 229 SKKCALLQQLLQSQDTMKNGIIFCNQKKNVVNLCHSLEKQGFSVCAIHGNIDQRSRMKIL 288
             K ALL  LL+ Q  +   I+F   ++ V  L   L K G + C + G + Q  R + +
Sbjct: 232 --KTALLCHLLK-QPEVTRSIVFVRTRERVHELAGWLRKAGINCCYLEGEMVQAKRNEAI 288

Query: 289 SNFKEGTIQLMVASDLAARGLDIPDVGHVFNFDVPNRAENYIHRIGRTGRAGRHGKAFTL 348
               +G + ++VA+D+AARG+DI DV HV NFD+P  A+ Y+HRIGRTGRAGR G A +L
Sbjct: 289 KRLTDGRVNVLVATDVAARGIDIDDVSHVINFDMPRSADTYLHRIGRTGRAGRKGTAISL 348

Query: 349 VAKEDIKHIDAIEKLIEKKVD 369
           V   D   +  IE+ IE+ + 
Sbjct: 349 VEAHDHLLLGKIERYIEEPLK 369