RPSBLAST alignment for GI: 254780382 and conserved domain: PRK11192
>gnl|CDD|183029 PRK11192, PRK11192, ATP-dependent RNA helicase SrmB; Provisional. Length = 434
Score = 314 bits (808), Expect = 2e-86
Identities = 146/381 (38%), Positives = 211/381 (55%), Gaps = 24/381 (6%)
Query: 1 MDFADLGLSPKVVCAVLDAGYVKPTPIQIKTIPLVLQRHDVCGIAQTGTGKTASFVLPML 60
F++L L ++ A+ D GY +PT IQ + IP L DV G A TGTGKTA+F+LP L
Sbjct: 1 TTFSELELDESLLEALQDKGYTRPTAIQAEAIPPALDGRDVLGSAPTGTGKTAAFLLPAL 60
Query: 61 -TILEKGRARVRMPRTLILEPTRELAAQVADNFEKYGKNYNLTVALLIGGIPFEAQNKKL 119
+L+ R + PR LIL PTRELA QVAD + K+ +L +A + GG+ + +
Sbjct: 61 QHLLDFPRRKSGPPRILILTPTRELAMQVADQARELAKHTHLDIATITGGVAYMNHAEVF 120
Query: 120 ERGADVLICTPGRILDHFNRGKLLMNNIEILVIDEADRMLDMGFIPYIQNITSLVPFTRQ 179
D+++ TPGR+L + +E L++DEADRMLDMGF I+ I + + +Q
Sbjct: 121 SENQDIVVATPGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIETIAAETRWRKQ 180
Query: 180 TLLFSATMTDE-LQKVSENFLQNPKRIEVNTPSST----------AETIEHCFVATYAQY 228
TLLFSAT+ + +Q +E L +P +E A+ +EH
Sbjct: 181 TLLFSATLEGDAVQDFAERLLNDPVEVEAEPSRRERKKIHQWYYRADDLEH--------- 231
Query: 229 SKKCALLQQLLQSQDTMKNGIIFCNQKKNVVNLCHSLEKQGFSVCAIHGNIDQRSRMKIL 288
K ALL LL+ Q + I+F ++ V L L K G + C + G + Q R + +
Sbjct: 232 --KTALLCHLLK-QPEVTRSIVFVRTRERVHELAGWLRKAGINCCYLEGEMVQAKRNEAI 288
Query: 289 SNFKEGTIQLMVASDLAARGLDIPDVGHVFNFDVPNRAENYIHRIGRTGRAGRHGKAFTL 348
+G + ++VA+D+AARG+DI DV HV NFD+P A+ Y+HRIGRTGRAGR G A +L
Sbjct: 289 KRLTDGRVNVLVATDVAARGIDIDDVSHVINFDMPRSADTYLHRIGRTGRAGRKGTAISL 348
Query: 349 VAKEDIKHIDAIEKLIEKKVD 369
V D + IE+ IE+ +
Sbjct: 349 VEAHDHLLLGKIERYIEEPLK 369