RPSBLAST alignment for GI: 254780382 and conserved domain: cd00268
>gnl|CDD|28928 cd00268, DEADc, DEAD-box helicases. A diverse family of proteins involved in ATP-dependent RNA unwinding, needed in a variety of cellular processes including splicing, ribosome biogenesis and RNA degradation. The name derives from the sequence of the Walker B motif (motif II). This domain contains the ATP- binding region.. Length = 203
Score = 251 bits (643), Expect = 3e-67
Identities = 100/204 (49%), Positives = 140/204 (68%), Gaps = 1/204 (0%)
Query: 3 FADLGLSPKVVCAVLDAGYVKPTPIQIKTIPLVLQRHDVCGIAQTGTGKTASFVLPMLTI 62
F +LGLSP+++ + G+ KPTPIQ + IP +L DV G AQTG+GKTA+F++P+L
Sbjct: 1 FEELGLSPELLRGIYALGFEKPTPIQARAIPPLLSGRDVIGQAQTGSGKTAAFLIPILEK 60
Query: 63 LEKGRARVRMPRTLILEPTRELAAQVADNFEKYGKNYNLTVALLIGGIPFEAQNKKLERG 122
L+ + P+ LIL PTRELA Q+A+ K GK+ NL V ++ GG + Q +KL+RG
Sbjct: 61 LDP-SPKKDGPQALILAPTRELALQIAEVARKLGKHTNLKVVVIYGGTSIDKQIRKLKRG 119
Query: 123 ADVLICTPGRILDHFNRGKLLMNNIEILVIDEADRMLDMGFIPYIQNITSLVPFTRQTLL 182
+++ TPGR+LD RGKL ++ ++ LV+DEADRMLDMGF I+ I L+P RQTLL
Sbjct: 120 PHIVVATPGRLLDLLERGKLDLSKVKYLVLDEADRMLDMGFEDQIREILKLLPKDRQTLL 179
Query: 183 FSATMTDELQKVSENFLQNPKRIE 206
FSATM E++ ++ FL+NP RI
Sbjct: 180 FSATMPKEVRDLARKFLRNPVRIL 203