RPSBLAST alignment for GI: 254780382 and conserved domain: COG0556

>gnl|CDD|30902 COG0556, UvrB, Helicase subunit of the DNA excision repair complex [DNA replication, recombination, and repair]. Length = 663

 Score = 49.0 bits (117), Expect = 3e-06
 Identities = 50/200 (25%), Positives = 84/200 (42%), Gaps = 37/200 (18%)

Query: 255 KKNVVNLCHSLEKQGFSVCAIHGNIDQRSRMKILSNFKEGTIQLMVASDLAARGLDIPDV 314
           KK   +L   L++ G  V  +H +ID   R++I+ + + G   ++V  +L   GLD+P+V
Sbjct: 456 KKMAEDLTEYLKELGIKVRYLHSDIDTLERVEIIRDLRLGEFDVLVGINLLREGLDLPEV 515

Query: 315 GHVFNFDVPN----RAE-NYIHRIGRTGRAGRHGKAFTLVAKEDIKHIDAIEKLIEKKVD 369
             V   D       R+E + I  IGR  R   +GK         I + D I   ++K +D
Sbjct: 516 SLVAILDADKEGFLRSERSLIQTIGRAAR-NVNGKV--------ILYADKITDSMQKAID 566

Query: 370 WLNGDLSSLNPPLEKIDIAQHNHARKNNPIPQ-----------KSTGFDRRKKNYSSQKS 418
                         + +I Q  +  ++   PQ                D  K     + S
Sbjct: 567 ETE----------RRREI-QMAYNEEHGITPQTIKKKIRDILDGEYEEDEYKAKIEKKAS 615

Query: 419 HIPLKESEK-ISKLQQDIQE 437
            +  KE EK I KL+++++E
Sbjct: 616 KMSKKELEKLIKKLEKEMKE 635