RPSBLAST alignment for GI: 254780382 and conserved domain: COG1197
>gnl|CDD|31390 COG1197, Mfd, Transcription-repair coupling factor (superfamily II helicase) [DNA replication, recombination, and repair / Transcription]. Length = 1139
Score = 42.9 bits (101), Expect = 2e-04
Identities = 22/98 (22%), Positives = 48/98 (48%), Gaps = 9/98 (9%)
Query: 271 SVCAIHGNIDQRSRMKILSNFKEGTIQLMVASDLAARGLDIPDVGHVFNFDVPNRAENY- 329
+ HG + +R +++ +F G ++V + + G+DIP+ N + RA+ +
Sbjct: 831 RIAVAHGQMRERELEEVMLDFYNGEYDVLVCTTIIETGIDIPNA----NTIIIERADKFG 886
Query: 330 ---IHRI-GRTGRAGRHGKAFTLVAKEDIKHIDAIEKL 363
++++ GR GR+ + A+ L + DA ++L
Sbjct: 887 LAQLYQLRGRVGRSNKQAYAYFLYPPQKALTEDAEKRL 924