RPSBLAST alignment for GI: 254780382 and conserved domain: KOG0327
>gnl|CDD|35548 KOG0327, KOG0327, KOG0327, Translation initiation factor 4F, helicase subunit (eIF-4A) and related helicases [Translation, ribosomal structure and biogenesis]. Length = 397
Score = 256 bits (656), Expect = 8e-69
Identities = 132/361 (36%), Positives = 205/361 (56%), Gaps = 9/361 (2%)
Query: 3 FADLGLSPKVVCAVLDAGYVKPTPIQIKTIPLVLQRHDVCGIAQTGTGKTASFVLPMLTI 62
F D+ L ++ + G+ KP+ IQ + I ++ HDV AQ+GTGKTA+F++ I
Sbjct: 28 FDDMNLKESLLRGIYAYGFEKPSAIQQRAILPCIKGHDVIAQAQSGTGKTAAFLIS---I 84
Query: 63 LEKGRARVRMPRTLILEPTRELAAQVADNFEKYGKNYNLTVALLIGGIPFEAQNKKLER- 121
L++ V+ + LIL PTRELA Q+ G + +++V IGG +++ L +
Sbjct: 85 LQQIDMSVKETQALILAPTRELAQQIQKVVRALGDHMDVSVHACIGGTNVRREDQALLKD 144
Query: 122 GADVLICTPGRILDHFNRGKLLMNNIEILVIDEADRMLDMGFIPYIQNITSLVPFTRQTL 181
+++ TPGR+ D NRG L + I++ V+DEAD ML GF I +I +P Q +
Sbjct: 145 KPHIVVGTPGRVFDMLNRGSLSTDGIKMFVLDEADEMLSRGFKDQIYDIFQELPSDVQVV 204
Query: 182 LFSATMTDELQKVSENFLQNPKRIEVNTPSSTAETIEHCFVATYAQYSKKCALLQQLLQS 241
L SATM ++ +V++ F++ P RI V T E I+ ++ +K L L
Sbjct: 205 LLSATMPSDVLEVTKKFMREPVRILVKKDELTLEGIKQFYI-----NVEKEEKLDTLCDL 259
Query: 242 QDTMKNGIIFCNQKKNVVNLCHSLEKQGFSVCAIHGNIDQRSRMKILSNFKEGTIQLMVA 301
+ +IFCN ++ V NL L GF+V AIHG+++Q R ++ F+ G+ ++++
Sbjct: 260 YRRVTQAVIFCNTRRKVDNLTDKLRAHGFTVSAIHGDMEQNERDTLMREFRSGSSRVLIT 319
Query: 302 SDLAARGLDIPDVGHVFNFDVPNRAENYIHRIGRTGRAGRHGKAFTLVAKEDIKHIDAIE 361
+DL ARG+D+ V V N+D+P R ENYIHRIGR GR GR G A V +ED++ + IE
Sbjct: 320 TDLLARGIDVQQVSLVVNYDLPARKENYIHRIGRAGRFGRKGVAINFVTEEDVRDLKDIE 379
Query: 362 K 362
K
Sbjct: 380 K 380