RPSBLAST alignment for GI: 254780382 and conserved domain: KOG0331
>gnl|CDD|35552 KOG0331, KOG0331, KOG0331, ATP-dependent RNA helicase [RNA processing and modification]. Length = 519
Score = 334 bits (858), Expect = 3e-92
Identities = 151/374 (40%), Positives = 219/374 (58%), Gaps = 10/374 (2%)
Query: 2 DFADLGLSPKVVCAVLDAGYVKPTPIQIKTIPLVLQRHDVCGIAQTGTGKTASFVLPMLT 61
F +LGLS +++ A+ + G+ KPTPIQ + P+ L D+ GIA+TG+GKT +++LP +
Sbjct: 92 AFQELGLSEELMKALKEQGFEKPTPIQAQGWPIALSGRDLVGIARTGSGKTLAYLLPAIV 151
Query: 62 ILEKGRA---RVRMPRTLILEPTRELAAQVADNFEKYGKNYNLTVALLIGGIPFEAQNKK 118
L + R P L+L PTRELA QV ++GK+ L + GG P Q +
Sbjct: 152 HLNNEQGKLSRGDGPIVLVLAPTRELAVQVQAEAREFGKSLRLRSTCVYGGAPKGPQLRD 211
Query: 119 LERGADVLICTPGRILDHFNRGKLLMNNIEILVIDEADRMLDMGFIPYIQNITS-LVPFT 177
LERG DV+I TPGR++D G L ++ + LV+DEADRMLDMGF P I+ I S +
Sbjct: 212 LERGVDVVIATPGRLIDLLEEGSLNLSRVTYLVLDEADRMLDMGFEPQIRKILSQIPRPD 271
Query: 178 RQTLLFSATMTDELQKVSENFLQNPKRIEV--NTPSSTAETIEHCFVATYAQYSKKCALL 235
RQTL+FSAT E+++++E+FL NP +I V I + + K L
Sbjct: 272 RQTLMFSATWPKEVRQLAEDFLNNPIQINVGNKKELKANHNIRQ--IVEVCDETAKLRKL 329
Query: 236 QQLLQSQDTMKNG--IIFCNQKKNVVNLCHSLEKQGFSVCAIHGNIDQRSRMKILSNFKE 293
+LL+ + G IIFC K+ L +L ++G+ AIHG+ Q R +L F+E
Sbjct: 330 GKLLEDISSDSEGKVIIFCETKRTCDELARNLRRKGWPAVAIHGDKSQSERDWVLKGFRE 389
Query: 294 GTIQLMVASDLAARGLDIPDVGHVFNFDVPNRAENYIHRIGRTGRAGRHGKAFTLVAKED 353
G ++VA+D+AARGLD+PDV V N+D PN E+Y+HRIGRTGRAG+ G A T ++
Sbjct: 390 GKSPVLVATDVAARGLDVPDVDLVINYDFPNNVEDYVHRIGRTGRAGKKGTAITFFTSDN 449
Query: 354 IKHIDAIEKLIEKK 367
K + K++ +
Sbjct: 450 AKLARELIKVLREA 463