RPSBLAST alignment for GI: 254780382 and conserved domain: KOG0332
>gnl|CDD|35553 KOG0332, KOG0332, KOG0332, ATP-dependent RNA helicase [RNA processing and modification]. Length = 477
Score = 216 bits (552), Expect = 9e-57
Identities = 123/387 (31%), Positives = 201/387 (51%), Gaps = 27/387 (6%)
Query: 3 FADLGLSPKVVCAVLDAGYVKPTPIQIKTIPLVLQR--HDVCGIAQTGTGKTASFVLPML 60
F +L L P+++ + + KP+ IQ +PL+L ++ +Q+GTGKTA+FVL ML
Sbjct: 92 FEELRLKPELLKGLYAMKFQKPSKIQETALPLLLAEPPQNLIAQSQSGTGKTAAFVLTML 151
Query: 61 TILEKGRARVRMPRTLILEPTRELAAQVADNFEKYGKNYNLTVALLIGGIPFEAQNKKLE 120
+ ++ V +P+ + L PTRELA Q + E+ GK LT + I G K +
Sbjct: 152 SRVD---PDVVVPQCICLAPTRELAPQTGEVVEEMGKFTELTASYAIRG-------SKAK 201
Query: 121 RGAD----VLICTPGRILDHFNRGKLL-MNNIEILVIDEADRMLDM-GFIPYIQNITSLV 174
RG ++I TPG +LD + K + + I++ V+DEAD M+D GF I +
Sbjct: 202 RGNKLTEQIVIGTPGTVLDLMLKLKCIDLEKIKVFVLDEADVMIDTQGFQDQSIRIMRSL 261
Query: 175 PFTRQTLLFSATMTDELQKVSENFLQNPKRIEVNTPSSTAETIEHCFVATYAQYSKKCAL 234
P +Q LLFSAT +++ + + N I + + I+ +V + K AL
Sbjct: 262 PRNQQLLLFSATFVEKVAAFALKIVPNANVIILKREELALDNIKQLYVLCACRDDKYQAL 321
Query: 235 LQQLLQSQDTMKNGIIFCNQKKNVVNLCHSLEKQGFSVCAIHGNIDQRSRMKILSNFKEG 294
+ L T+ IIFC+ K + L + +G V +HG++ R I+ F+EG
Sbjct: 322 VN--LYGLLTIGQSIIFCHTKATAMWLYEEMRAEGHQVSLLHGDLTVEQRAAIIDRFREG 379
Query: 295 TIQLMVASDLAARGLDIPDVGHVFNFDVPNRA------ENYIHRIGRTGRAGRHGKAFTL 348
++++ +++ ARG+D+ V V N+D+P + E Y+HRIGRTGR G+ G A L
Sbjct: 380 KEKVLITTNVCARGIDVAQVSVVVNYDLPVKYTGEPDYETYLHRIGRTGRFGKKGLAINL 439
Query: 349 V-AKEDIKHIDAIEKLIEKKVDWLNGD 374
V K+ + ++ I+K K+ L+ D
Sbjct: 440 VDDKDSMNIMNKIQKHFNMKIKRLDPD 466