RPSBLAST alignment for GI: 254780382 and conserved domain: KOG0333

>gnl|CDD|35554 KOG0333, KOG0333, KOG0333, U5 snRNP-like RNA helicase subunit [RNA processing and modification]. Length = 673
 Score =  288 bits (739), Expect = 2e-78
 Identities = 133/380 (35%), Positives = 206/380 (54%), Gaps = 34/380 (8%)

Query: 5   DLGLSPKVVCAVLDAGYVKPTPIQIKTIPLVLQRHDVCGIAQTGTGKTASFVLPMLTILE 64
           + G   +++  +   GY +PTPIQ + IPL LQ  D  G+A+TG+GKTA+F++P+L  + 
Sbjct: 249 ESGFPLELLSVIKKPGYKEPTPIQRQAIPLGLQNRDPIGVAETGSGKTAAFLIPLLIWIS 308

Query: 65  KGRARVRM------PRTLILEPTRELAAQVADNFEKYGKNYNLTVALLIGGIPFEAQNKK 118
                 R+      P  +IL PTRELA Q+ +   K+GK   +    +IGG+ FE Q  +
Sbjct: 309 SLPPMARLENNIEGPYAIILAPTRELAQQIEEETNKFGKPLGIRTVSVIGGLSFEEQGFQ 368

Query: 119 LERGADVLICTPGRILDHFNRGKLLMNNIEILVIDEADRMLDMGFIPYIQNITSLVPFT- 177
           L  G +++I TPGR++D      L++N    +V+DEADRM+DMGF P +Q I   +P + 
Sbjct: 369 LSMGCEIVIATPGRLIDSLENRYLVLNQCTYVVLDEADRMIDMGFEPDVQKILEQMPSSN 428

Query: 178 ------------------------RQTLLFSATMTDELQKVSENFLQNPKRIEVNTPSST 213
                                   RQT++F+ATM   +++++ ++L+ P  + + +    
Sbjct: 429 AKPDTDEKEGEERVRKNFSSSKKYRQTVMFTATMPPAVERLARSYLRRPVVVTIGSAGKP 488

Query: 214 AETIEHCFVATYAQYSKKCALLQQLLQSQDTMKNGIIFCNQKKNVVNLCHSLEKQGFSVC 273
              +E           +K   L ++L+S       IIF N KK    L   LEK G+ V 
Sbjct: 489 TPRVEQ--KVEMVSEDEKRKKLIEILESNFD-PPIIIFVNTKKGADALAKILEKAGYKVT 545

Query: 274 AIHGNIDQRSRMKILSNFKEGTIQLMVASDLAARGLDIPDVGHVFNFDVPNRAENYIHRI 333
            +HG   Q  R   L++F+EGT  ++VA+D+A RG+DIP+V  V N+D+    E+Y HRI
Sbjct: 546 TLHGGKSQEQRENALADFREGTGDILVATDVAGRGIDIPNVSLVINYDMAKSIEDYTHRI 605

Query: 334 GRTGRAGRHGKAFTLVAKED 353
           GRTGRAG+ G A + +   D
Sbjct: 606 GRTGRAGKSGTAISFLTPAD 625