RPSBLAST alignment for GI: 254780382 and conserved domain: KOG0334
>gnl|CDD|35555 KOG0334, KOG0334, KOG0334, RNA helicase [RNA processing and modification]. Length = 997
Score = 248 bits (635), Expect = 2e-66
Identities = 146/463 (31%), Positives = 235/463 (50%), Gaps = 16/463 (3%)
Query: 4 ADLGLSPKVVCAVLDAGYVKPTPIQIKTIPLVLQRHDVCGIAQTGTGKTASFVLPMLTIL 63
GLS K++ + GY KPTPIQ + IP ++ DV G+A+TG+GKT +F+LPM+ +
Sbjct: 368 TQCGLSSKILETLKKLGYEKPTPIQAQAIPAIMSGRDVIGVAKTGSGKTLAFLLPMIRHI 427
Query: 64 EKGR--ARVRMPRTLILEPTRELAAQVADNFEKYGKNYNLTVALLIGGIPFEAQNKKLER 121
+ R P LIL PTRELA Q+ K+ K + V + GG Q +L+R
Sbjct: 428 KDQRPLEEGDGPIALILAPTRELAMQIHREVRKFLKLLGIRVVCVYGGSGISQQIAELKR 487
Query: 122 GADVLICTPGRILDHF--NRGKLL-MNNIEILVIDEADRMLDMGFIPYIQNITSLVPFTR 178
GA++++CTPGR++D N G++ + + LV+DEADRM DMGF P I I + R
Sbjct: 488 GAEIVVCTPGRMIDILCANSGRVTNLRRVTYLVLDEADRMFDMGFEPQITRILQNLRPDR 547
Query: 179 QTLLFSATMTDELQKVSENFLQNPKRIEVNTPSSTAETIEHCFVATYAQYSKKCALLQQL 238
QT+LFSAT ++ ++ L+ P I V S + + + K LL+ L
Sbjct: 548 QTVLFSATFPRSMEALARKVLKKPVEIIVGGRSVVCKEVTQVVRVCAIENEKFLKLLELL 607
Query: 239 LQSQDTMKNGIIFCNQKKNVVNLCHSLEKQGFSVCAIHGNIDQRSRMKILSNFKEGTIQL 298
+ + K IIF ++++ L L+K G++ ++HG +DQ R + +FK G + L
Sbjct: 608 GERYEDGKT-IIFVDKQEKADALLRDLQKAGYNCDSLHGGVDQHDRSSTIEDFKNGVVNL 666
Query: 299 MVASDLAARGLDIPDVGHVFNFDVPNRAENYIHRIGRTGRAGRHGKAFTLVAKEDIKHID 358
+VA+ + ARGLD+ ++ V N+D PN E+Y+HR+GRTGRAGR G A T + + +K+
Sbjct: 667 LVATSVVARGLDVKELILVVNYDFPNHYEDYVHRVGRTGRAGRKGAAVTFITPDQLKYAG 726
Query: 359 AIEKLIEKKVDWLNGDLSSLNPPLEKIDIAQH-NHARKNNPIPQKSTGFDRRKKNYSSQK 417
+ K +E P L + + + GF + + +
Sbjct: 727 DLCKALELS--------KQPVPKLLQALSERFKAKQKAGGSQVHGGGGFGGKGLKFDEVE 778
Query: 418 SHIPLKESEKISKLQQDIQENDADSLGFRGNMPAFMLPKNRGK 460
+ +E ++ + ++E D +S N P+ +
Sbjct: 779 EEL-RQERKEAQRKDLGLKEGDNESDIEVDNSDKASQPRESIQ 820