RPSBLAST alignment for GI: 254780382 and conserved domain: KOG0341
>gnl|CDD|35562 KOG0341, KOG0341, KOG0341, DEAD-box protein abstrakt [RNA processing and modification]. Length = 610
Score = 247 bits (631), Expect = 6e-66
Identities = 149/412 (36%), Positives = 223/412 (54%), Gaps = 30/412 (7%)
Query: 2 DFADLGLSPKVVCAVLDAGYVKPTPIQIKTIPLVLQRHDVCGIAQTGTGKTASFVLPMLT 61
F ++ ++ + G V PTPIQ++ +P+VL D+ GIA TG+GKT FVLP++
Sbjct: 171 SFKEMKFPKPLLRGLKKKGIVHPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPVIM 230
Query: 62 I-LEKGR----ARVRMPRTLILEPTRELAAQVADNFEKYGKNYN------LTVALLIGGI 110
LE+ AR P LI+ P+RELA Q D E+Y L L IGG+
Sbjct: 231 FALEQEMMLPFARGEGPYGLIICPSRELARQTHDIIEQYVAALQEAGYPELRSLLCIGGV 290
Query: 111 PFEAQNKKLERGADVLICTPGRILDHFNRGKLLMNNIEILVIDEADRMLDMGFIPYIQNI 170
P Q + RG +++ TPGR++D + + ++ L +DEADRM+DMGF I+ I
Sbjct: 291 PVREQLDVVRRGVHIVVATPGRLMDMLAKKIMSLDACRYLTLDEADRMIDMGFEDDIRTI 350
Query: 171 TSLVPFTRQTLLFSATMTDELQKVSENFLQNPKRIEVNTPSSTAETIEHCFVATYAQYSK 230
S RQTLLFSATM ++Q +++ L P + VN + A +++ V +Y K
Sbjct: 351 FSFFKGQRQTLLFSATMPKKIQNFAKSALVKP--VTVNVGRAGAASLD---VIQEVEYVK 405
Query: 231 KCALLQQLLQS-QDTMKNGIIFCNQKKNVVNLCHSLEKQGFSVCAIHGNIDQRSRMKILS 289
+ A + LL+ Q T +IF +K +V ++ L +G AIHG DQ R +
Sbjct: 406 QEAKIVYLLECLQKTSPPVLIFAEKKADVDDIHEYLLLKGVEAVAIHGGKDQEDRHYAIE 465
Query: 290 NFKEGTIQLMVASDLAARGLDIPDVGHVFNFDVPNRAENYIHRIGRTGRAGRHGKAFTLV 349
F+ G ++VA+D+A++GLD PD+ HV N+D+P ENY+HRIGRTGR+G+ G A T +
Sbjct: 466 AFRAGKKDVLVATDVASKGLDFPDIQHVINYDMPEEIENYVHRIGRTGRSGKTGIATTFI 525
Query: 350 AKE-------DIKHIDAIEKLIEKKVDWLNGDLSSLNPPLEKIDIAQHNHAR 394
K D+KH+ L E K + + L+ L P+E+ IA +
Sbjct: 526 NKNQEESVLLDLKHL-----LQEAKQE-VPPVLAELAGPMEEETIADAGGEK 571